BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047901
(786 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 135/421 (32%), Positives = 180/421 (42%), Gaps = 59/421 (14%)
Query: 28 LAYLDLSINGFFGTLPPQVRNLS-KLKYLDLSENELSGKIPPEI--GXXXXXXXXXXXXN 84
L LDLS N F G LP + NLS L LDLS N SG I P + N
Sbjct: 342 LKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNN 401
Query: 85 QFSGTFPP-ICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICR 143
F+G PP + N S L + L N LSG+IP +G+L KL L L N G++P+ +
Sbjct: 402 GFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMY 461
Query: 144 SGLLEILTVNDNHFLGSIPN-LRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHN 202
LE L ++ N G IP+ L NC +L L N LTG I + G NL L LS+N
Sbjct: 462 VKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNN 521
Query: 203 NFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPM---- 258
+F G I + G C L L ++ N G IP + S +++N IAG+ +
Sbjct: 522 SFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSG----KIAANFIAGKRYVYIKN 577
Query: 259 ----------------------ELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLS 296
+L RL + N + GH + + D+S
Sbjct: 578 DGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMS 637
Query: 297 SNRLNNSILEALGFMFKLFYLNFSHNQFSQEIPXXXXXXXXXXXXXXXXNLFKGSIPSRI 356
N L+ I + +G M LF LN HN S GSIP +
Sbjct: 638 YNMLSGYIPKEIGSMPYLFILNLGHNDIS------------------------GSIPDEV 673
Query: 357 CNLESLEKLNLSHNNISGQIPACFIGMSGLLSIDISYNELRGPIPNSTVFRNAPRESFLG 416
+L L L+LS N + G+IP ++ L ID+S N L GPIP F P FL
Sbjct: 674 GDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLN 733
Query: 417 N 417
N
Sbjct: 734 N 734
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 129/426 (30%), Positives = 189/426 (44%), Gaps = 32/426 (7%)
Query: 6 INLTSTGLKGTLQEFSFSSFPHLAYLDLSINGFFGTLPPQVRN-LSKLKYLDLSENELSG 64
+N++S G + S L YL L+ N F G +P + L LDLS N G
Sbjct: 249 LNISSNQFVGPIPPLPLKS---LQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYG 305
Query: 65 KIPPEIGXXXXXXXXXXXXNQFSGTFP--PICNLSNLKYISLHNNKLSGSIPEEIGNL-M 121
+PP G N FSG P + + LK + L N+ SG +PE + NL
Sbjct: 306 AVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSA 365
Query: 122 KLSYLMLDTNQFTGQLPRNICRS--GLLEILTVNDNHFLGSIP-NLRNCRSLVRAHLGRN 178
L L L +N F+G + N+C++ L+ L + +N F G IP L NC LV HL N
Sbjct: 366 SLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFN 425
Query: 179 NLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGN 238
L+G I G L+ L L N GEI L TLI+ N++TG IP + N
Sbjct: 426 YLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSN 485
Query: 239 SSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSN 298
+ L+ + LS+N + GEIP +GRL +L L L N SG++P LG L + DL++N
Sbjct: 486 CTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTN 545
Query: 299 RLNNSILEAL---------GFMFKLFYLNFSHNQFSQEIPXXXXXXXXXXXXXXXXNLFK 349
N +I A+ F+ Y+ ++ +E N
Sbjct: 546 LFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLS 605
Query: 350 GSIPSRIC-------------NLESLEKLNLSHNNISGQIPACFIGMSGLLSIDISYNEL 396
P I N S+ L++S+N +SG IP M L +++ +N++
Sbjct: 606 TRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDI 665
Query: 397 RGPIPN 402
G IP+
Sbjct: 666 SGSIPD 671
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 117/360 (32%), Positives = 170/360 (47%), Gaps = 32/360 (8%)
Query: 27 HLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGXXXXXXXXXXXXNQF 86
+L +LD+S N F T P + + S L++LD+S N+LSG I NQF
Sbjct: 198 NLEFLDVSSNNF-STGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQF 256
Query: 87 SGTFPPICNLSNLKYISLHNNKLSGSIPEEI-GNLMKLSYLMLDTNQFTGQLP------- 138
G PP+ L +L+Y+SL NK +G IP+ + G L+ L L N F G +P
Sbjct: 257 VGPIPPL-PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCS 315
Query: 139 ------------------RNICRSGLLEILTVNDNHFLGSIP-NLRN-CRSLVRAHLGRN 178
+ + L++L ++ N F G +P +L N SL+ L N
Sbjct: 316 LLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSN 375
Query: 179 NLTGNISEDFGIYP--NLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEI 236
N +G I + P L+ L L +N F G+I C L +L +S N ++G IP +
Sbjct: 376 NFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSL 435
Query: 237 GNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLS 296
G+ S+L L L N + GEIP EL + +L LIL N L+G +P L T L + LS
Sbjct: 436 GSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLS 495
Query: 297 SNRLNNSILEALGFMFKLFYLNFSHNQFSQEIPXXXXXXXXXXXXXXXXNLFKGSIPSRI 356
+NRL I + +G + L L S+N FS IP NLF G+IP+ +
Sbjct: 496 NNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 555
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/326 (33%), Positives = 154/326 (47%), Gaps = 31/326 (9%)
Query: 8 LTSTGLKGTLQEFSFSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIP 67
L + G G + + S+ L L LS N GT+P + +LSKL+ L L N L G+IP
Sbjct: 398 LQNNGFTGKIPP-TLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIP 456
Query: 68 PEIGXXXXXXXXXXXXNQFSGTFPP-ICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYL 126
E+ N +G P + N +NL +ISL NN+L+G IP+ IG L L+ L
Sbjct: 457 QELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAIL 516
Query: 127 MLDTNQFTGQLPRNI--CRSGLLEILTVNDNHFLGSIPN--------------------- 163
L N F+G +P + CRS L L +N N F G+IP
Sbjct: 517 KLSNNSFSGNIPAELGDCRS--LIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVY 574
Query: 164 LRNCRSLVRAHLGRNNL---TGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGT 220
++N H G NL G SE +++ + G S + +
Sbjct: 575 IKNDGMKKECH-GAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMF 633
Query: 221 LIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHL 280
L +S N ++G IP EIG+ L +L+L N I+G IP E+G L LN L L N+L G +
Sbjct: 634 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRI 693
Query: 281 PRALGLLTELEYFDLSSNRLNNSILE 306
P+A+ LT L DLS+N L+ I E
Sbjct: 694 PQAMSALTMLTEIDLSNNNLSGPIPE 719
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 125/428 (29%), Positives = 192/428 (44%), Gaps = 62/428 (14%)
Query: 8 LTSTGLKGTLQEFSFSSFPHLAYLDLSINGFFG--TLPPQVRNLSKLKYLDLSENELSGK 65
L+++ + G++ F S+ L LDLS N G T + + S LK+L++S N L
Sbjct: 81 LSNSHINGSVSGFKCSA--SLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTL--- 135
Query: 66 IPPEIGXXXXXXXXXXXXNQFSGTFPPICNLSNLKYISLHNNKLSGSIPEEIGNLM---- 121
F G L++L+ + L N +SG+ +G ++
Sbjct: 136 -------------------DFPGKVSGGLKLNSLEVLDLSANSISGA--NVVGWVLSDGC 174
Query: 122 -KLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNL 180
+L +L + N+ +G + ++ R LE L V+ N+F IP L +C +L + N L
Sbjct: 175 GELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKL 232
Query: 181 TGNISEDFGIYPNLKFLDLSHNNFYGEI-------------SSN----------WGKCHR 217
+G+ S LK L++S N F G I + N G C
Sbjct: 233 SGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDT 292
Query: 218 LGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPME-LGRLISLNKLILRGNQL 276
L L +SGN+ G +PP G+ S L L LSSN+ +GE+PM+ L ++ L L L N+
Sbjct: 293 LTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEF 352
Query: 277 SGHLPRAL-GLLTELEYFDLSSNRLNNSILEALGFMFK--LFYLNFSHNQFSQEIPXXXX 333
SG LP +L L L DLSSN + IL L K L L +N F+ +IP
Sbjct: 353 SGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLS 412
Query: 334 XXXXXXXXXXXXNLFKGSIPSRICNLESLEKLNLSHNNISGQIPACFIGMSGLLSIDISY 393
N G+IPS + +L L L L N + G+IP + + L ++ + +
Sbjct: 413 NCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDF 472
Query: 394 NELRGPIP 401
N+L G IP
Sbjct: 473 NDLTGEIP 480
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 135/421 (32%), Positives = 180/421 (42%), Gaps = 59/421 (14%)
Query: 28 LAYLDLSINGFFGTLPPQVRNLS-KLKYLDLSENELSGKIPPEI--GXXXXXXXXXXXXN 84
L LDLS N F G LP + NLS L LDLS N SG I P + N
Sbjct: 345 LKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNN 404
Query: 85 QFSGTFPP-ICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICR 143
F+G PP + N S L + L N LSG+IP +G+L KL L L N G++P+ +
Sbjct: 405 GFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMY 464
Query: 144 SGLLEILTVNDNHFLGSIPN-LRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHN 202
LE L ++ N G IP+ L NC +L L N LTG I + G NL L LS+N
Sbjct: 465 VKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNN 524
Query: 203 NFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPM---- 258
+F G I + G C L L ++ N G IP + S +++N IAG+ +
Sbjct: 525 SFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSG----KIAANFIAGKRYVYIKN 580
Query: 259 ----------------------ELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLS 296
+L RL + N + GH + + D+S
Sbjct: 581 DGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMS 640
Query: 297 SNRLNNSILEALGFMFKLFYLNFSHNQFSQEIPXXXXXXXXXXXXXXXXNLFKGSIPSRI 356
N L+ I + +G M LF LN HN S GSIP +
Sbjct: 641 YNMLSGYIPKEIGSMPYLFILNLGHNDIS------------------------GSIPDEV 676
Query: 357 CNLESLEKLNLSHNNISGQIPACFIGMSGLLSIDISYNELRGPIPNSTVFRNAPRESFLG 416
+L L L+LS N + G+IP ++ L ID+S N L GPIP F P FL
Sbjct: 677 GDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLN 736
Query: 417 N 417
N
Sbjct: 737 N 737
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 129/426 (30%), Positives = 189/426 (44%), Gaps = 32/426 (7%)
Query: 6 INLTSTGLKGTLQEFSFSSFPHLAYLDLSINGFFGTLPPQVRN-LSKLKYLDLSENELSG 64
+N++S G + S L YL L+ N F G +P + L LDLS N G
Sbjct: 252 LNISSNQFVGPIPPLPLKS---LQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYG 308
Query: 65 KIPPEIGXXXXXXXXXXXXNQFSGTFP--PICNLSNLKYISLHNNKLSGSIPEEIGNL-M 121
+PP G N FSG P + + LK + L N+ SG +PE + NL
Sbjct: 309 AVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSA 368
Query: 122 KLSYLMLDTNQFTGQLPRNICRS--GLLEILTVNDNHFLGSIP-NLRNCRSLVRAHLGRN 178
L L L +N F+G + N+C++ L+ L + +N F G IP L NC LV HL N
Sbjct: 369 SLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFN 428
Query: 179 NLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGN 238
L+G I G L+ L L N GEI L TLI+ N++TG IP + N
Sbjct: 429 YLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSN 488
Query: 239 SSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSN 298
+ L+ + LS+N + GEIP +GRL +L L L N SG++P LG L + DL++N
Sbjct: 489 CTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTN 548
Query: 299 RLNNSILEAL---------GFMFKLFYLNFSHNQFSQEIPXXXXXXXXXXXXXXXXNLFK 349
N +I A+ F+ Y+ ++ +E N
Sbjct: 549 LFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLS 608
Query: 350 GSIPSRIC-------------NLESLEKLNLSHNNISGQIPACFIGMSGLLSIDISYNEL 396
P I N S+ L++S+N +SG IP M L +++ +N++
Sbjct: 609 TRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDI 668
Query: 397 RGPIPN 402
G IP+
Sbjct: 669 SGSIPD 674
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 117/360 (32%), Positives = 170/360 (47%), Gaps = 32/360 (8%)
Query: 27 HLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGXXXXXXXXXXXXNQF 86
+L +LD+S N F T P + + S L++LD+S N+LSG I NQF
Sbjct: 201 NLEFLDVSSNNF-STGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQF 259
Query: 87 SGTFPPICNLSNLKYISLHNNKLSGSIPEEI-GNLMKLSYLMLDTNQFTGQLP------- 138
G PP+ L +L+Y+SL NK +G IP+ + G L+ L L N F G +P
Sbjct: 260 VGPIPPL-PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCS 318
Query: 139 ------------------RNICRSGLLEILTVNDNHFLGSIP-NLRN-CRSLVRAHLGRN 178
+ + L++L ++ N F G +P +L N SL+ L N
Sbjct: 319 LLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSN 378
Query: 179 NLTGNISEDFGIYP--NLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEI 236
N +G I + P L+ L L +N F G+I C L +L +S N ++G IP +
Sbjct: 379 NFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSL 438
Query: 237 GNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLS 296
G+ S+L L L N + GEIP EL + +L LIL N L+G +P L T L + LS
Sbjct: 439 GSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLS 498
Query: 297 SNRLNNSILEALGFMFKLFYLNFSHNQFSQEIPXXXXXXXXXXXXXXXXNLFKGSIPSRI 356
+NRL I + +G + L L S+N FS IP NLF G+IP+ +
Sbjct: 499 NNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 558
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/326 (33%), Positives = 154/326 (47%), Gaps = 31/326 (9%)
Query: 8 LTSTGLKGTLQEFSFSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIP 67
L + G G + + S+ L L LS N GT+P + +LSKL+ L L N L G+IP
Sbjct: 401 LQNNGFTGKIPP-TLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIP 459
Query: 68 PEIGXXXXXXXXXXXXNQFSGTFPP-ICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYL 126
E+ N +G P + N +NL +ISL NN+L+G IP+ IG L L+ L
Sbjct: 460 QELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAIL 519
Query: 127 MLDTNQFTGQLPRNI--CRSGLLEILTVNDNHFLGSIPN--------------------- 163
L N F+G +P + CRS L L +N N F G+IP
Sbjct: 520 KLSNNSFSGNIPAELGDCRS--LIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVY 577
Query: 164 LRNCRSLVRAHLGRNNL---TGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGT 220
++N H G NL G SE +++ + G S + +
Sbjct: 578 IKNDGMKKECH-GAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMF 636
Query: 221 LIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHL 280
L +S N ++G IP EIG+ L +L+L N I+G IP E+G L LN L L N+L G +
Sbjct: 637 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRI 696
Query: 281 PRALGLLTELEYFDLSSNRLNNSILE 306
P+A+ LT L DLS+N L+ I E
Sbjct: 697 PQAMSALTMLTEIDLSNNNLSGPIPE 722
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 125/428 (29%), Positives = 192/428 (44%), Gaps = 62/428 (14%)
Query: 8 LTSTGLKGTLQEFSFSSFPHLAYLDLSINGFFG--TLPPQVRNLSKLKYLDLSENELSGK 65
L+++ + G++ F S+ L LDLS N G T + + S LK+L++S N L
Sbjct: 84 LSNSHINGSVSGFKCSA--SLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTL--- 138
Query: 66 IPPEIGXXXXXXXXXXXXNQFSGTFPPICNLSNLKYISLHNNKLSGSIPEEIGNLM---- 121
F G L++L+ + L N +SG+ +G ++
Sbjct: 139 -------------------DFPGKVSGGLKLNSLEVLDLSANSISGA--NVVGWVLSDGC 177
Query: 122 -KLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNL 180
+L +L + N+ +G + ++ R LE L V+ N+F IP L +C +L + N L
Sbjct: 178 GELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKL 235
Query: 181 TGNISEDFGIYPNLKFLDLSHNNFYGEI-------------SSN----------WGKCHR 217
+G+ S LK L++S N F G I + N G C
Sbjct: 236 SGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDT 295
Query: 218 LGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPME-LGRLISLNKLILRGNQL 276
L L +SGN+ G +PP G+ S L L LSSN+ +GE+PM+ L ++ L L L N+
Sbjct: 296 LTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEF 355
Query: 277 SGHLPRAL-GLLTELEYFDLSSNRLNNSILEALGFMFK--LFYLNFSHNQFSQEIPXXXX 333
SG LP +L L L DLSSN + IL L K L L +N F+ +IP
Sbjct: 356 SGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLS 415
Query: 334 XXXXXXXXXXXXNLFKGSIPSRICNLESLEKLNLSHNNISGQIPACFIGMSGLLSIDISY 393
N G+IPS + +L L L L N + G+IP + + L ++ + +
Sbjct: 416 NCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDF 475
Query: 394 NELRGPIP 401
N+L G IP
Sbjct: 476 NDLTGEIP 483
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 143/291 (49%), Gaps = 22/291 (7%)
Query: 505 TKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIR 564
+ +F K +G+G VY+ +L G +AVK+ + +F E++ ++
Sbjct: 37 SDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKE---ERXQGGELQFQTEVEMISMAV 93
Query: 565 HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASED-FDWRKRMNVITGVADALS 623
HRN+++ GFC +VY Y+ GS+A+ L S+ DW KR + G A L+
Sbjct: 94 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLA 153
Query: 624 YMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELV-GTFGYVAPA 682
Y+H C P I+HRD+ + N+LLD E+EA V DFG AKL+ + V GT G++AP
Sbjct: 154 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPE 213
Query: 683 HGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAM 742
+ + G K +EK DV+ +GV+ LE+I G+ D + +
Sbjct: 214 YLSTG----------KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 263
Query: 743 LDHRLPHPSLDV-------QEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
L + +DV E++ +++VALLC P RP M V ++L
Sbjct: 264 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 142/291 (48%), Gaps = 22/291 (7%)
Query: 505 TKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIR 564
+ +F K +G+G VY+ +L G +AVK+ + +F E++ ++
Sbjct: 29 SDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKE---ERTQGGELQFQTEVEMISMAV 85
Query: 565 HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASED-FDWRKRMNVITGVADALS 623
HRN+++ GFC +VY Y+ GS+A+ L S+ DW KR + G A L+
Sbjct: 86 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLA 145
Query: 624 YMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELV-GTFGYVAPA 682
Y+H C P I+HRD+ + N+LLD E+EA V DFG AKL+ + V G G++AP
Sbjct: 146 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPE 205
Query: 683 HGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAM 742
+ + G K +EK DV+ +GV+ LE+I G+ D + +
Sbjct: 206 YLSTG----------KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255
Query: 743 LDHRLPHPSLDV-------QEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
L + +DV E++ +++VALLC P RP M V ++L
Sbjct: 256 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 115/216 (53%), Gaps = 16/216 (7%)
Query: 507 DFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKF-NSPFPNDQMSDQKEFLNEIKALTKIRH 565
D + K IG G +V+RA+ G +AVK F ++++ EFL E+ + ++RH
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVN---EFLREVAIMKRLRH 93
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
NIV F G + + +V EY++RGSL +L + A E D R+R+++ VA ++Y+
Sbjct: 94 PNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYL 153
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
H+ PPIVHRD+ S N+L+D +Y +V DFG ++L GT ++AP
Sbjct: 154 HNRN-PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAP---- 208
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
E+ EK DVYSFGV+ E+ + P
Sbjct: 209 ------EVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 116/216 (53%), Gaps = 16/216 (7%)
Query: 507 DFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKF-NSPFPNDQMSDQKEFLNEIKALTKIRH 565
D + K IG G +V+RA+ G +AVK F ++++ EFL E+ + ++RH
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVN---EFLREVAIMKRLRH 93
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
NIV F G + + +V EY++RGSL +L + A E D R+R+++ VA ++Y+
Sbjct: 94 PNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYL 153
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
H+ PPIVHR++ S N+L+D +Y +V DFG ++L + GT ++AP
Sbjct: 154 HNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAP---- 208
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
E+ EK DVYSFGV+ E+ + P
Sbjct: 209 ------EVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 128/281 (45%), Gaps = 26/281 (9%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
+G+G VY+ + + +AVKK + +++F EIK + K +H N+V+ G
Sbjct: 39 MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
F S +VY Y+ GSL LS + W R + G A+ ++++H +
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH--- 154
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLLK--PNSSNWTELVGTFGYVAPAHGNIGLHLA 691
+HRDI S N+LLD + A++SDFG A+ + + + +VGT Y+AP
Sbjct: 155 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPE--------- 205
Query: 692 ELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAM------LDH 745
A +IT K D+YSFGV+ LE+I G D + +D
Sbjct: 206 --ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDK 263
Query: 746 RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
++ E + S VA CL N RP ++ V QLL
Sbjct: 264 KMNDADSTSVEAMYS---VASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 127/281 (45%), Gaps = 26/281 (9%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
+G+G VY+ + + +AVKK + +++F EIK + K +H N+V+ G
Sbjct: 39 MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
F S +VY Y+ GSL LS + W R + G A+ ++++H +
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH--- 154
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLLK--PNSSNWTELVGTFGYVAPAHGNIGLHLA 691
+HRDI S N+LLD + A++SDFG A+ + + +VGT Y+AP
Sbjct: 155 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPE--------- 205
Query: 692 ELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAM------LDH 745
A +IT K D+YSFGV+ LE+I G D + +D
Sbjct: 206 --ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDK 263
Query: 746 RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
++ E + S VA CL N RP ++ V QLL
Sbjct: 264 KMNDADSTSVEAMYS---VASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 137/292 (46%), Gaps = 37/292 (12%)
Query: 505 TKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIR 564
T +FD K+ IG G VY+ L G K+A+K+ +P + +EF EI+ L+ R
Sbjct: 38 TNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR-RTP---ESSQGIEEFETEIETLSFCR 93
Query: 565 HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVL-SNNFASEDFDWRKRMNVITGVADALS 623
H ++V GFC ++Y+Y+ G+L L ++ + W +R+ + G A L
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLH 153
Query: 624 YMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELV----GTFGYV 679
Y+H I+HRD+ S N+LLD + +++DFG +K K + T L GT GY+
Sbjct: 154 YLHTRA---IIHRDVKSINILLDENFVPKITDFGISK--KGTELDQTHLXXVVKGTLGYI 208
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEF 739
P + G ++TEK DVYSFGV+ EV+ + +N+
Sbjct: 209 DPEYFIKG----------RLTEKSDVYSFGVVLFEVLCAR----SAIVQSLPREMVNLAE 254
Query: 740 NAMLDH------RLPHPSLDVQ---EKLISIMEVALLCLDGCPNSRPTMQTV 782
A+ H ++ P+L + E L + A+ CL RP+M V
Sbjct: 255 WAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 136/292 (46%), Gaps = 37/292 (12%)
Query: 505 TKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIR 564
T +FD K+ IG G VY+ L G K+A+K+ +P + +EF EI+ L+ R
Sbjct: 38 TNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR-RTP---ESSQGIEEFETEIETLSFCR 93
Query: 565 HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVL-SNNFASEDFDWRKRMNVITGVADALS 623
H ++V GFC ++Y+Y+ G+L L ++ + W +R+ + G A L
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLH 153
Query: 624 YMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELV----GTFGYV 679
Y+H I+HRD+ S N+LLD + +++DFG +K K T L GT GY+
Sbjct: 154 YLHTRA---IIHRDVKSINILLDENFVPKITDFGISK--KGTELGQTHLXXVVKGTLGYI 208
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEF 739
P + G ++TEK DVYSFGV+ EV+ + +N+
Sbjct: 209 DPEYFIKG----------RLTEKSDVYSFGVVLFEVLCAR----SAIVQSLPREMVNLAE 254
Query: 740 NAMLDH------RLPHPSLDVQ---EKLISIMEVALLCLDGCPNSRPTMQTV 782
A+ H ++ P+L + E L + A+ CL RP+M V
Sbjct: 255 WAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 127/281 (45%), Gaps = 26/281 (9%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
+G+G VY+ + + +AVKK + +++F EIK + K +H N+V+ G
Sbjct: 33 MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 91
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
F S +VY Y+ GSL LS + W R + G A+ ++++H +
Sbjct: 92 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH--- 148
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN--WTELVGTFGYVAPAHGNIGLHLA 691
+HRDI S N+LLD + A++SDFG A+ + + +VGT Y+AP
Sbjct: 149 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPE--------- 199
Query: 692 ELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAM------LDH 745
A +IT K D+YSFGV+ LE+I G D + +D
Sbjct: 200 --ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDK 257
Query: 746 RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
++ E + S VA CL N RP ++ V QLL
Sbjct: 258 KMNDADSTSVEAMYS---VASQCLHEKKNKRPDIKKVQQLL 295
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 101/206 (49%), Gaps = 17/206 (8%)
Query: 515 GKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGF 574
G+G VY+ + + +AVKK + +++F EIK K +H N+V+ GF
Sbjct: 31 GEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGF 89
Query: 575 CSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIV 634
S +VY Y GSL LS + W R + G A+ ++++H + +
Sbjct: 90 SSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH---I 146
Query: 635 HRDISSNNVLLDLEYEARVSDFGTAKLLK--PNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
HRDI S N+LLD + A++SDFG A+ + + +VGT Y AP
Sbjct: 147 HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPE---------- 196
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKG 718
A +IT K D+YSFGV+ LE+I G
Sbjct: 197 -ALRGEITPKSDIYSFGVVLLEIITG 221
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 129/262 (49%), Gaps = 8/262 (3%)
Query: 2 RVNSINLTSTGL-KGTLQEFSFSSFPHLAYLDLS-INGFFGTLPPQVRNLSKLKYLDLSE 59
RVN+++L+ L K S ++ P+L +L + IN G +PP + L++L YL ++
Sbjct: 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITH 110
Query: 60 NELSGKIPPEIGXXXXXXXXXXXXNQFSGTFPP-ICNLSNLKYISLHNNKLSGSIPEEIG 118
+SG IP + N SGT PP I +L NL I+ N++SG+IP+ G
Sbjct: 111 TNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYG 170
Query: 119 NLMKL-SYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRNC-RSLVRAHLG 176
+ KL + + + N+ TG++P L + ++ N G L ++ + HL
Sbjct: 171 SFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLA 229
Query: 177 RNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEI 236
+N+L ++ + G+ NL LDL +N YG + + L +L VS NN+ G I P+
Sbjct: 230 KNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEI-PQG 287
Query: 237 GNSSQLHVLDLSSNHIAGEIPM 258
GN + V ++N P+
Sbjct: 288 GNLQRFDVSAYANNKCLCGSPL 309
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 5/220 (2%)
Query: 113 IPEEIGNLMKLSYLMLD-TNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPN-LRNCRSL 170
IP + NL L++L + N G +P I + L L + + G+IP+ L ++L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 171 VRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGT-LIVSGNNIT 229
V N L+G + PNL + N G I ++G +L T + +S N +T
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 230 GRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTE 289
G+IPP N + L +DLS N + G+ + G + K+ L N L+ L + +GL
Sbjct: 188 GKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKN 245
Query: 290 LEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQEIP 329
L DL +NR+ ++ + L + L LN S N EIP
Sbjct: 246 LNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 101/231 (43%), Gaps = 26/231 (11%)
Query: 197 LDLSHNNFYGE--ISSNWGKCHRLGTLIVSG-NNITGRIPPEIGNSSQLHVLDLSSNHIA 253
LDLS N I S+ L L + G NN+ G IPP I +QLH L ++ +++
Sbjct: 55 LDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVS 114
Query: 254 GEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSILEALGFMFK 313
G IP L ++ +L L N LSG LP ++ L L NR++ +I ++ G K
Sbjct: 115 GAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSK 174
Query: 314 LFY-LNFSHNQFSQEIPXX-------------------XXXXXXXXXXXXXXNLFKGSIP 353
LF + S N+ + +IP +L K S+
Sbjct: 175 LFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLA 234
Query: 354 ---SRICNLESLEKLNLSHNNISGQIPACFIGMSGLLSIDISYNELRGPIP 401
++ ++L L+L +N I G +P + L S+++S+N L G IP
Sbjct: 235 FDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 84/203 (41%), Gaps = 3/203 (1%)
Query: 176 GRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPE 235
G NNL G I L +L ++H N G I + L TL S N ++G +PP
Sbjct: 85 GINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPS 144
Query: 236 IGNSSQLHVLDLSSNHIAGEIPMELGRLISL-NKLILRGNQLSGHLPRALGLLTELEYFD 294
I + L + N I+G IP G L + + N+L+G +P L L + D
Sbjct: 145 ISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVD 203
Query: 295 LSSNRLNNSILEALGFMFKLFYLNFSHNQFSQEIPXXXXXXXXXXXXXXXXNLFKGSIPS 354
LS N L G ++ + N + ++ N G++P
Sbjct: 204 LSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-GKVGLSKNLNGLDLRNNRIYGTLPQ 262
Query: 355 RICNLESLEKLNLSHNNISGQIP 377
+ L+ L LN+S NN+ G+IP
Sbjct: 263 GLTQLKFLHSLNVSFNNLCGEIP 285
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%)
Query: 350 GSIPSRICNLESLEKLNLSHNNISGQIPACFIGMSGLLSIDISYNELRGPIPNS 403
G IP I L L L ++H N+SG IP + L+++D SYN L G +P S
Sbjct: 91 GPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPS 144
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 64/167 (38%), Gaps = 23/167 (13%)
Query: 257 PMELGRLISLNKLILRGNQLSGHLPRA-------LGLLTELEYFDLSSNRLNNSILEALG 309
P + L+ + K + LS LP LG+L + D + R+NN L L
Sbjct: 5 PQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDT---DTQTYRVNNLDLSGLN 61
Query: 310 F---------MFKLFYLNFSH----NQFSQEIPXXXXXXXXXXXXXXXXNLFKGSIPSRI 356
+ L YLNF + N IP G+IP +
Sbjct: 62 LPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFL 121
Query: 357 CNLESLEKLNLSHNNISGQIPACFIGMSGLLSIDISYNELRGPIPNS 403
+++L L+ S+N +SG +P + L+ I N + G IP+S
Sbjct: 122 SQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDS 168
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 120/279 (43%), Gaps = 30/279 (10%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
+DF+ +GKG+ +VY A+ I K ++ + + E++ + +RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
NI++ YG+ +++ EY L TV FD ++ IT +A+ALSY
Sbjct: 68 PNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
H ++HRDI N+LL E +++DFG + + SS TEL GT Y+ P
Sbjct: 125 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTELCGTLDYLPPEMIE 179
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAMLDH 745
+H EK D++S GVL E + GK P + +EF
Sbjct: 180 GRMH----------DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT----- 224
Query: 746 RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
P + LIS + L P+ RP ++ V +
Sbjct: 225 -FPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 256
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 30/279 (10%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
+DF+ +GKG+ +VY A+ I K ++ + + E++ + +RH
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
NI++ YG+ +++ EY RG + L FD ++ IT +A+ALSY
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPRGEVYKELQK---LSKFDEQRTATYITELANALSYC 129
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
H ++HRDI N+LL E +++DFG + + SS T L GT Y+ P
Sbjct: 130 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIE 184
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAMLDH 745
+H EK D++S GVL E + GK P + +EF
Sbjct: 185 GRMH----------DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT----- 229
Query: 746 RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
P + LIS + L P+ RP ++ V +
Sbjct: 230 -FPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 261
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 30/279 (10%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
+DF+ +GKG+ +VY A+ I K ++ + + E++ + +RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
NI++ YG+ +++ EY L TV FD ++ IT +A+ALSY
Sbjct: 68 PNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
H ++HRDI N+LL E +++DFG + + SS T+L GT Y+ P
Sbjct: 125 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIE 179
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAMLDH 745
+H EK D++S GVL E + GK P + +EF
Sbjct: 180 GRMH----------DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT----- 224
Query: 746 RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
P + LIS + L P+ RP ++ V +
Sbjct: 225 -FPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 256
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 30/279 (10%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
+DF+ +GKG+ +VY A+ I K ++ + + E++ + +RH
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
NI++ YG+ +++ EY L TV FD ++ IT +A+ALSY
Sbjct: 73 PNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYC 129
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
H ++HRDI N+LL E +++DFG + + SS T+L GT Y+ P
Sbjct: 130 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIE 184
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAMLDH 745
+H EK D++S GVL E + GK P + +EF
Sbjct: 185 GRMH----------DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT----- 229
Query: 746 RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
P + LIS + L P+ RP ++ V +
Sbjct: 230 -FPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 261
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 30/279 (10%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
+DF+ +GKG+ +VY A+ I K ++ + + E++ + +RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
NI++ YG+ +++ EY L TV FD ++ IT +A+ALSY
Sbjct: 68 PNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
H ++HRDI N+LL E +++DFG + + SS T+L GT Y+ P
Sbjct: 125 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIE 179
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAMLDH 745
+H EK D++S GVL E + GK P + +EF
Sbjct: 180 GRMH----------DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT----- 224
Query: 746 RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
P + LIS + L P+ RP ++ V +
Sbjct: 225 -FPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 256
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 30/279 (10%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
+DF+ +GKG+ +VY A+ I K ++ + + E++ + +RH
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
NI++ YG+ +++ EY L TV FD ++ IT +A+ALSY
Sbjct: 69 PNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYC 125
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
H ++HRDI N+LL E +++DFG + + SS T+L GT Y+ P
Sbjct: 126 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIE 180
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAMLDH 745
+H EK D++S GVL E + GK P + +EF
Sbjct: 181 GRMH----------DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT----- 225
Query: 746 RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
P + LIS + L P+ RP ++ V +
Sbjct: 226 -FPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 257
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 119/279 (42%), Gaps = 30/279 (10%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
+DF+ +GKG+ +VY A+ I K ++ + + E++ + +RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
NI++ YG+ +++ EY L TV FD ++ IT +A+ALSY
Sbjct: 68 PNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
H ++HRDI N+LL E +++DFG + + SS T L GT Y+ P
Sbjct: 125 HSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTXLCGTLDYLPPEMIE 179
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAMLDH 745
+H EK D++S GVL E + GK P + +EF
Sbjct: 180 GRMH----------DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT----- 224
Query: 746 RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
P + LIS + L P+ RP ++ V +
Sbjct: 225 -FPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 256
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 116/235 (49%), Gaps = 34/235 (14%)
Query: 499 EEIIRRTK------DFDAKYC----IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQM 547
EEI+ + + D KY IG+G +VY A + +G ++A+++ N Q
Sbjct: 3 EEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNL-----QQ 57
Query: 548 SDQKEFL-NEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDF 606
+KE + NEI + + ++ NIV + +VV EY+ GSL V++ E
Sbjct: 58 QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG- 116
Query: 607 DWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNS 666
+ V AL ++H + ++HRDI S+N+LL ++ +++DFG + P
Sbjct: 117 ---QIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170
Query: 667 SNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
S +E+VGT ++AP E+ K D++S G++A+E+I+G+ P
Sbjct: 171 SKRSEMVGTPYWMAP----------EVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 119/279 (42%), Gaps = 30/279 (10%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
+DF+ +GKG+ +VY A+ I K ++ + + E++ + +RH
Sbjct: 12 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 71
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
NI++ YG+ +++ EY L TV FD ++ IT +A+ALSY
Sbjct: 72 PNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYC 128
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
H ++HRDI N+LL E +++DFG + + SS T L GT Y+ P
Sbjct: 129 HSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIE 183
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAMLDH 745
+H EK D++S GVL E + GK P + +EF
Sbjct: 184 GRMH----------DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT----- 228
Query: 746 RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
P + LIS + L P+ RP ++ V +
Sbjct: 229 -FPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 260
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 119/279 (42%), Gaps = 30/279 (10%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
+DF+ +GKG+ +VY A+ I K ++ + + E++ + +RH
Sbjct: 7 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 66
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
NI++ YG+ +++ EY L TV FD ++ IT +A+ALSY
Sbjct: 67 PNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYC 123
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
H ++HRDI N+LL E +++DFG + + SS T L GT Y+ P
Sbjct: 124 HSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIE 178
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAMLDH 745
+H EK D++S GVL E + GK P + +EF
Sbjct: 179 GRMH----------DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT----- 223
Query: 746 RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
P + LIS + L P+ RP ++ V +
Sbjct: 224 -FPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 255
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 119/279 (42%), Gaps = 30/279 (10%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
+DF+ +GKG+ +VY A+ I K ++ + + E++ + +RH
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
NI++ YG+ +++ EY L TV FD ++ IT +A+ALSY
Sbjct: 71 PNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
H ++HRDI N+LL E +++DFG + + SS T L GT Y+ P
Sbjct: 128 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIE 182
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAMLDH 745
+H EK D++S GVL E + GK P + +EF
Sbjct: 183 GRMH----------DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT----- 227
Query: 746 RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
P + LIS + L P+ RP ++ V +
Sbjct: 228 -FPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 259
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 119/279 (42%), Gaps = 30/279 (10%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
+DF+ +GKG+ +VY A+ I K ++ + + E++ + +RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
NI++ YG+ +++ EY L TV FD ++ IT +A+ALSY
Sbjct: 68 PNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
H ++HRDI N+LL E +++DFG + + SS T L GT Y+ P
Sbjct: 125 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIE 179
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAMLDH 745
+H EK D++S GVL E + GK P + +EF
Sbjct: 180 GRMH----------DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT----- 224
Query: 746 RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
P + LIS + L P+ RP ++ V +
Sbjct: 225 -FPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 256
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 119/279 (42%), Gaps = 30/279 (10%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
+DF+ +GKG+ +VY A+ I K ++ + + E++ + +RH
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
NI++ YG+ +++ EY L TV FD ++ IT +A+ALSY
Sbjct: 73 PNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYC 129
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
H ++HRDI N+LL E +++DFG + + SS T L GT Y+ P
Sbjct: 130 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIE 184
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAMLDH 745
+H EK D++S GVL E + GK P + +EF
Sbjct: 185 GRMH----------DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT----- 229
Query: 746 RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
P + LIS + L P+ RP ++ V +
Sbjct: 230 -FPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 261
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 119/279 (42%), Gaps = 30/279 (10%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
+DF+ +GKG+ +VY A+ I K ++ + + E++ + +RH
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
NI++ YG+ +++ EY L TV FD ++ IT +A+ALSY
Sbjct: 71 PNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
H ++HRDI N+LL E +++DFG + + SS T L GT Y+ P
Sbjct: 128 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIE 182
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAMLDH 745
+H EK D++S GVL E + GK P + +EF
Sbjct: 183 GRMH----------DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT----- 227
Query: 746 RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
P + LIS + L P+ RP ++ V +
Sbjct: 228 -FPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 259
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 119/279 (42%), Gaps = 30/279 (10%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
+DF+ +GKG+ +VY A+ I K ++ + + E++ + +RH
Sbjct: 5 EDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 64
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
NI++ YG+ +++ EY L TV FD ++ IT +A+ALSY
Sbjct: 65 PNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYC 121
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
H ++HRDI N+LL E +++DFG + + SS T L GT Y+ P
Sbjct: 122 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIE 176
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAMLDH 745
+H EK D++S GVL E + GK P + +EF
Sbjct: 177 GRMH----------DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT----- 221
Query: 746 RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
P + LIS + L P+ RP ++ V +
Sbjct: 222 -FPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 253
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 119/279 (42%), Gaps = 30/279 (10%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
+DF+ +GKG+ +VY A+ I K ++ + + E++ + +RH
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
NI++ YG+ +++ EY RG + L FD ++ IT +A+ALSY
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPRGEVYKELQK---LSKFDEQRTATYITELANALSYC 129
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
H ++HRDI N+LL E +++DFG + + SS L GT Y+ P
Sbjct: 130 HSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLXGTLDYLPPEMIE 184
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAMLDH 745
+H EK D++S GVL E + GK P + +EF
Sbjct: 185 GRMH----------DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT----- 229
Query: 746 RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
P + LIS + L P+ RP ++ V +
Sbjct: 230 -FPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 261
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 119/279 (42%), Gaps = 30/279 (10%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
+DF+ +GKG+ +VY A+ I K ++ + + E++ + +RH
Sbjct: 25 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 84
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
NI++ YG+ +++ EY L TV FD ++ IT +A+ALSY
Sbjct: 85 PNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYC 141
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
H ++HRDI N+LL E +++DFG + + SS T L GT Y+ P
Sbjct: 142 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIE 196
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAMLDH 745
+H EK D++S GVL E + GK P + +EF
Sbjct: 197 GRMH----------DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT----- 241
Query: 746 RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
P + LIS + L P+ RP ++ V +
Sbjct: 242 -FPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 273
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 104/235 (44%), Gaps = 18/235 (7%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
+DF+ +GKG+ +VY A+ I K ++ + + E++ + +RH
Sbjct: 34 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 93
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
NI++ YG+ +++ EY L TV FD ++ IT +A+ALSY
Sbjct: 94 PNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYC 150
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
H ++HRDI N+LL E +++DFG + + SS T L GT Y+ P
Sbjct: 151 HSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIE 205
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFN 740
+H EK D++S GVL E + GK P + +EF
Sbjct: 206 GRMH----------DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT 250
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 119/279 (42%), Gaps = 30/279 (10%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
+DF+ +GKG+ +VY A+ I K ++ + + E++ + +RH
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
NI++ YG+ +++ EY L TV FD ++ IT +A+ALSY
Sbjct: 71 PNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
H ++HRDI N+LL E +++DFG + + SS +L GT Y+ P
Sbjct: 128 HSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEMIE 182
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAMLDH 745
+H EK D++S GVL E + GK P + +EF
Sbjct: 183 GRMH----------DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT----- 227
Query: 746 RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
P + LIS + L P+ RP ++ V +
Sbjct: 228 -FPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 259
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 118/279 (42%), Gaps = 30/279 (10%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
+DF+ +GKG+ +VY A+ I K ++ + + E++ + +RH
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
NI++ YG+ +++ EY L TV FD ++ IT +A+ALSY
Sbjct: 73 PNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYC 129
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
H ++HRDI N+LL E +++DFG + + SS T L GT Y+ P
Sbjct: 130 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEXIE 184
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAMLDH 745
H EK D++S GVL E + GK P + +EF
Sbjct: 185 GRXH----------DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT----- 229
Query: 746 RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
P + LIS + L P+ RP ++ V +
Sbjct: 230 -FPDFVTEGARDLISRL------LKHNPSQRPXLREVLE 261
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 118/279 (42%), Gaps = 30/279 (10%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
+DF+ +GKG+ +VY A+ I K ++ + + E++ + +RH
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
NI++ YG+ +++ EY L TV FD ++ IT +A+ALSY
Sbjct: 69 PNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYC 125
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
H ++HRDI N+LL E +++DFG + SS T L GT Y+ P
Sbjct: 126 HSKR---VIHRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRTTLSGTLDYLPPEMIE 180
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAMLDH 745
+H EK D++S GVL E + GK P + +EF
Sbjct: 181 GRMH----------DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT----- 225
Query: 746 RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
P + LIS + L P+ RP ++ V +
Sbjct: 226 -FPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 257
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 118/279 (42%), Gaps = 30/279 (10%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
+DF+ +GKG+ +VY A+ I K ++ + + E++ + +RH
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
NI++ YG+ +++ EY L TV FD ++ IT +A+ALSY
Sbjct: 71 PNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
H ++HRDI N+LL E +++DFG + + SS L GT Y+ P
Sbjct: 128 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIE 182
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAMLDH 745
+H EK D++S GVL E + GK P + +EF
Sbjct: 183 GRMH----------DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT----- 227
Query: 746 RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
P + LIS + L P+ RP ++ V +
Sbjct: 228 -FPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 259
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 117/270 (43%), Gaps = 31/270 (11%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
+G G+ V K +AVK MS+ EF E + + K+ H +VKFYG
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIK----EGSMSED-EFFQEAQTMMKLSHPKLVKFYG 70
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
CS ++V EYI+ G L L ++ + + + + + V + ++++ F
Sbjct: 71 VCSKEYPIYIVTEYISNGCLLNYLRSH--GKGLEPSQLLEMCYDVCEGMAFLESHQF--- 125
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAEL 693
+HRD+++ N L+D + +VSDFG + + + + V + G P + E+
Sbjct: 126 IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD-----QYVSSVGTKFP----VKWSAPEV 176
Query: 694 AYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXXXXXXXXXINIEFNAMLDHRLPHPSL 752
+ K + K DV++FG+L EV GK P D + HRL P L
Sbjct: 177 FHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS-------EVVLKVSQGHRLYRPHL 229
Query: 753 DVQEKLISIMEVALLCLDGCPNSRPTMQTV 782
+I ++ C P RPT Q +
Sbjct: 230 ASD----TIYQIMYSCWHELPEKRPTFQQL 255
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 119/279 (42%), Gaps = 30/279 (10%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
+DF+ +GKG+ +VY A+ I K ++ + + E++ + +RH
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
NI++ YG+ +++ EY L TV FD ++ IT +A+ALSY
Sbjct: 71 PNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
H ++HRDI N+LL E ++++FG + + SS T L GT Y+ P
Sbjct: 128 HSKR---VIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEMIE 182
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAMLDH 745
+H EK D++S GVL E + GK P + +EF
Sbjct: 183 GRMH----------DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT----- 227
Query: 746 RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
P + LIS + L P+ RP ++ V +
Sbjct: 228 -FPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 259
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 118/279 (42%), Gaps = 30/279 (10%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
+DF+ +GKG+ +VY A+ I K ++ + + E++ + +RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
NI++ YG+ +++ EY L TV FD ++ IT +A+ALSY
Sbjct: 68 PNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
H ++HRDI N+LL E +++DFG + + SS L GT Y+ P
Sbjct: 125 HSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIE 179
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAMLDH 745
+H EK D++S GVL E + GK P + +EF
Sbjct: 180 GRMH----------DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT----- 224
Query: 746 RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
P + LIS + L P+ RP ++ V +
Sbjct: 225 -FPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 256
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 118/279 (42%), Gaps = 30/279 (10%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
+DF+ +GKG+ +VY A+ I K ++ + + E++ + +RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
NI++ YG+ +++ EY L TV FD ++ IT +A+ALSY
Sbjct: 68 PNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
H ++HRDI N+LL E +++DFG + + SS L GT Y+ P
Sbjct: 125 HSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIE 179
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAMLDH 745
+H EK D++S GVL E + GK P + +EF
Sbjct: 180 GRMH----------DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT----- 224
Query: 746 RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
P + LIS + L P+ RP ++ V +
Sbjct: 225 -FPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 256
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 118/279 (42%), Gaps = 30/279 (10%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
+DF+ +GKG+ +VY A+ I K ++ + + E++ + +RH
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
NI++ YG+ +++ EY L TV FD ++ IT +A+ALSY
Sbjct: 71 PNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
H ++HRDI N+LL E +++DFG + + SS L GT Y+ P
Sbjct: 128 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIE 182
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAMLDH 745
+H EK D++S GVL E + GK P + +EF
Sbjct: 183 GRMH----------DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT----- 227
Query: 746 RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
P + LIS + L P+ RP ++ V +
Sbjct: 228 -FPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 259
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 115/235 (48%), Gaps = 34/235 (14%)
Query: 499 EEIIRRTK------DFDAKYC----IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQM 547
EEI+ + + D KY IG+G +VY A + +G ++A+++ N Q
Sbjct: 4 EEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNL-----QQ 58
Query: 548 SDQKEFL-NEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDF 606
+KE + NEI + + ++ NIV + +VV EY+ GSL V++ E
Sbjct: 59 QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG- 117
Query: 607 DWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNS 666
+ V AL ++H + ++HRDI S+N+LL ++ +++DFG + P
Sbjct: 118 ---QIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 171
Query: 667 SNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
S + +VGT ++AP E+ K D++S G++A+E+I+G+ P
Sbjct: 172 SKRSXMVGTPYWMAP----------EVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 103/235 (43%), Gaps = 18/235 (7%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
+DFD +GKG+ +VY A+ I K ++ + + E++ + +RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
NI++ YG+ +++ EY L TV FD ++ IT +A+ALSY
Sbjct: 72 PNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSRFDEQRTATYITELANALSYC 128
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
H ++HRDI N+LL E +++DFG + + SS T L GT Y+ P
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIE 183
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFN 740
+H EK D++S GVL E + G P + +EF
Sbjct: 184 GRMH----------DEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFT 228
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 115/235 (48%), Gaps = 34/235 (14%)
Query: 499 EEIIRRTK------DFDAKYC----IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQM 547
EEI+ + + D KY IG+G +VY A + +G ++A+++ N Q
Sbjct: 3 EEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNL-----QQ 57
Query: 548 SDQKEFL-NEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDF 606
+KE + NEI + + ++ NIV + +VV EY+ GSL V++ E
Sbjct: 58 QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG- 116
Query: 607 DWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNS 666
+ V AL ++H + ++HRDI S+N+LL ++ +++DFG + P
Sbjct: 117 ---QIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170
Query: 667 SNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
S + +VGT ++AP E+ K D++S G++A+E+I+G+ P
Sbjct: 171 SKRSTMVGTPYWMAP----------EVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 104/235 (44%), Gaps = 18/235 (7%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
+DF+ +GKG+ +VY A+ I K ++ + + E++ + +RH
Sbjct: 34 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 93
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
NI++ YG+ +++ EY L TV FD ++ IT +A+ALSY
Sbjct: 94 PNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYC 150
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
H ++HRDI N+LL E +++DFG + + SS +L GT Y+ P
Sbjct: 151 HSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEMIE 205
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFN 740
+H EK D++S GVL E + GK P + +EF
Sbjct: 206 GRMH----------DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT 250
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 115/235 (48%), Gaps = 34/235 (14%)
Query: 499 EEIIRRTK------DFDAKYC----IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQM 547
EEI+ + + D KY IG+G +VY A + +G ++A+++ N Q
Sbjct: 3 EEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNL-----QQ 57
Query: 548 SDQKEFL-NEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDF 606
+KE + NEI + + ++ NIV + +VV EY+ GSL V++ E
Sbjct: 58 QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG- 116
Query: 607 DWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNS 666
+ V AL ++H + ++HRDI S+N+LL ++ +++DFG + P
Sbjct: 117 ---QIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170
Query: 667 SNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
S + +VGT ++AP E+ K D++S G++A+E+I+G+ P
Sbjct: 171 SKRSXMVGTPYWMAP----------EVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 119/279 (42%), Gaps = 30/279 (10%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
+DF+ +GKG+ +VY A+ I K ++ + + E++ + +RH
Sbjct: 10 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 69
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
NI++ YG+ +++ EY L TV FD ++ IT +A+ALSY
Sbjct: 70 PNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYC 126
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
H ++HRDI N+LL E ++++FG + + SS T L GT Y+ P
Sbjct: 127 HSK---RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEMIE 181
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAMLDH 745
+H EK D++S GVL E + GK P + +EF
Sbjct: 182 GRMH----------DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT----- 226
Query: 746 RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
P + LIS + L P+ RP ++ V +
Sbjct: 227 -FPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 258
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 118/279 (42%), Gaps = 30/279 (10%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
+DF+ +GKG+ +VY A+ I K ++ + + E++ + +RH
Sbjct: 10 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 69
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
NI++ YG+ +++ EY L TV FD ++ IT +A+ALSY
Sbjct: 70 PNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYC 126
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
H ++HRDI N+LL E +++DFG + + SS L GT Y+ P
Sbjct: 127 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIE 181
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAMLDH 745
+H EK D++S GVL E + GK P + +EF
Sbjct: 182 GRMH----------DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT----- 226
Query: 746 RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
P + LIS + L P+ RP ++ V +
Sbjct: 227 -FPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 258
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 133/299 (44%), Gaps = 37/299 (12%)
Query: 500 EIIRR-TKDFDAKYC-----IGKGEHRSVYRAKLPSGDK----IAVKKFNSPFPNDQMSD 549
E +R K+ D Y IG GE V R +L + K +A+K + Q
Sbjct: 4 EAVREFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQ--- 60
Query: 550 QKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWR 609
++EFL+E + + H NI++ G ++ ++ E++ G+L + L N F
Sbjct: 61 RREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLN--DGQFTVI 118
Query: 610 KRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
+ + ++ G+A + Y+ + VHRD+++ N+L++ +VSDFG ++ L+ NSS+
Sbjct: 119 QLVGMLRGIASGMRYLAEMSY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDP 175
Query: 670 TELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXXX 728
TE G + I E K T D +S+G++ EV+ G+ P
Sbjct: 176 TETSSLGGKIP-----IRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP----YWD 226
Query: 729 XXXXXXIN-IEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
IN IE D+RLP P + S+ ++ L C N+RP V L
Sbjct: 227 MSNQDVINAIE----QDYRLPPPP----DCPTSLHQLMLDCWQKDRNARPRFPQVVSAL 277
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 118/279 (42%), Gaps = 30/279 (10%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
+DF+ +GKG+ +VY A+ I K ++ + + E++ + +RH
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
NI++ YG+ +++ EY L TV FD ++ IT +A+ALSY
Sbjct: 69 PNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYC 125
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
H ++HRDI N+LL E +++DFG + + SS L GT Y+ P
Sbjct: 126 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIE 180
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAMLDH 745
+H EK D++S GVL E + GK P + +EF
Sbjct: 181 GRMH----------DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT----- 225
Query: 746 RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
P + LIS + L P+ RP ++ V +
Sbjct: 226 -FPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 257
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 119/279 (42%), Gaps = 30/279 (10%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
+DF+ +GKG+ +VY A+ + I K ++ + + E++ + +RH
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
NI++ YG+ +++ EY L TV FD ++ IT +A+ALSY
Sbjct: 68 PNILRLYGYFHDSTRVYLILEY---APLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
H ++HRDI N+LL E +++DFG + + SS L GT Y+ P
Sbjct: 125 HSK---KVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIE 179
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAMLDH 745
+H EK D++S GVL E + GK P + +EF
Sbjct: 180 GRMH----------DEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFT----- 224
Query: 746 RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
P + LIS + L P+ RP ++ V +
Sbjct: 225 -FPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 256
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 128/283 (45%), Gaps = 34/283 (12%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
K+ + + +G+G V +AK + D +A+K+ S S++K F+ E++ L+++ H
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWRAKD-VAIKQIES------ESERKAFIVELRQLSRVNH 60
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
NIVK YG C + +V EY GSL VL + M+ + ++Y+
Sbjct: 61 PNIVKLYGAC--LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 118
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEA-RVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHG 684
H ++HRD+ N+LL ++ DFGTA ++ + +N G+ ++AP
Sbjct: 119 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTN---NKGSAAWMAP--- 172
Query: 685 NIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXX-XXXXXINIEFNAML 743
E+ +EKCDV+S+G++ EVI + P D ++ L
Sbjct: 173 -------EVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPL 225
Query: 744 DHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
LP P I + C P+ RP+M+ + +++
Sbjct: 226 IKNLPKP----------IESLMTRCWSKDPSQRPSMEEIVKIM 258
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 128/283 (45%), Gaps = 34/283 (12%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
K+ + + +G+G V +AK + D +A+K+ S S++K F+ E++ L+++ H
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKWRAKD-VAIKQIES------ESERKAFIVELRQLSRVNH 61
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
NIVK YG C + +V EY GSL VL + M+ + ++Y+
Sbjct: 62 PNIVKLYGAC--LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 119
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEA-RVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHG 684
H ++HRD+ N+LL ++ DFGTA ++ + +N G+ ++AP
Sbjct: 120 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTN---NKGSAAWMAP--- 173
Query: 685 NIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXX-XXXXXINIEFNAML 743
E+ +EKCDV+S+G++ EVI + P D ++ L
Sbjct: 174 -------EVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPL 226
Query: 744 DHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
LP P I + C P+ RP+M+ + +++
Sbjct: 227 IKNLPKP----------IESLMTRCWSKDPSQRPSMEEIVKIM 259
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 111/227 (48%), Gaps = 28/227 (12%)
Query: 501 IIRRTKDFDAKYC----IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFL- 554
II D KY IG+G +VY A + +G ++A+++ N Q +KE +
Sbjct: 12 IIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNL-----QQQPKKELII 66
Query: 555 NEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV 614
NEI + + ++ NIV + +VV EY+ GSL V++ E + V
Sbjct: 67 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG----QIAAV 122
Query: 615 ITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG 674
AL ++H + ++HR+I S+N+LL ++ +++DFG + P S + +VG
Sbjct: 123 CRECLQALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVG 179
Query: 675 TFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
T ++AP E+ K D++S G++A+E+I+G+ P
Sbjct: 180 TPYWMAP----------EVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 131/295 (44%), Gaps = 40/295 (13%)
Query: 505 TKDFDAKYC-----IGKGEHRSVYRAKLPSGDK----IAVKKFNSPFPNDQMSDQKEFLN 555
K+ D Y IG GE V R +L + K +A+K + Q ++EFL+
Sbjct: 8 AKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQ---RREFLS 64
Query: 556 EIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVI 615
E + + H NI++ G ++ ++ E++ G+L + L N F + + ++
Sbjct: 65 EASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLN--DGQFTVIQLVGML 122
Query: 616 TGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGT 675
G+A + Y+ + VHRD+++ N+L++ +VSDFG ++ L+ NSS+ T
Sbjct: 123 RGIASGMRYLAEMSY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPT----- 174
Query: 676 FGYVAPAHGNIGLHLA--ELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXXXXXXX 732
Y + G I + E K T D +S+G++ EV+ G+ P
Sbjct: 175 --YTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP----YWDMSNQ 228
Query: 733 XXIN-IEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
IN IE D+RLP P + S+ ++ L C N+RP V L
Sbjct: 229 DVINAIE----QDYRLPPPP----DCPTSLHQLMLDCWQKDRNARPRFPQVVSAL 275
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 102/235 (43%), Gaps = 18/235 (7%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
+DFD +GKG+ +VY A+ I K ++ + + E++ + +RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
NI++ YG+ +++ EY L TV FD ++ IT +A+ALSY
Sbjct: 72 PNILRLYGYFHDATRVYLILEY---APLGTVYRELQKLSRFDEQRTATYITELANALSYC 128
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
H ++HRDI N+LL E +++DFG + + SS L GT Y+ P
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIE 183
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFN 740
+H EK D++S GVL E + G P + +EF
Sbjct: 184 GRMH----------DEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFT 228
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 26/217 (11%)
Query: 508 FDAKYCIGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHR 566
FD +G+G + SVY+A +G +A+K+ P + SD +E + EI + +
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV----PVE--SDLQEIIKEISIMQQCDSP 84
Query: 567 NIVKFYGFCSHVRHSFVVYEYINRGSLATV--LSNNFASEDFDWRKRMNVITGVADALSY 624
++VK+YG ++V EY GS++ + L N +ED + ++ L Y
Sbjct: 85 HVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTED----EIATILQSTLKGLEY 140
Query: 625 MHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHG 684
+H F +HRDI + N+LL+ E A+++DFG A L + ++GT ++AP
Sbjct: 141 LH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPE-- 195
Query: 685 NIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ E+ Y D++S G+ A+E+ +GK P
Sbjct: 196 ----VIQEIGYNC----VADIWSLGITAIEMAEGKPP 224
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 132/285 (46%), Gaps = 39/285 (13%)
Query: 514 IGKGEHRSVYRAKLPSGDK--IAVKKF---NSPFPNDQMSDQKEFLNEIKALTKIRHRNI 568
IGKG V++ +L DK +A+K +S + + +EF E+ ++ + H NI
Sbjct: 27 IGKGGFGLVHKGRL-VKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 569 VKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHD 628
VK YG + +V E++ G L L + + W ++ ++ +A + YM +
Sbjct: 86 VKLYGLMHNPPR--MVMEFVPCGDLYHRLLDK--AHPIKWSVKLRLMLDIALGIEYMQNQ 141
Query: 629 CFPPIVHRDISSNNVLLDLEYE-----ARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAH 683
PPIVHRD+ S N+ L E A+V+DFGT++ + + + L+G F ++AP
Sbjct: 142 N-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQ---SVHSVSGLLGNFQWMAPE- 196
Query: 684 GNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAML 743
IG A TEK D YSF ++ ++ G+ P D I+F M+
Sbjct: 197 -TIG------AEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG-------KIKFINMI 242
Query: 744 DHRLPHPSL--DVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
P++ D +L +++E LC G P RP + + L
Sbjct: 243 REEGLRPTIPEDCPPRLRNVIE---LCWSGDPKKRPHFSYIVKEL 284
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 104/217 (47%), Gaps = 16/217 (7%)
Query: 504 RTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
R +D++ Y IG G + + + S KI V K + + ++++ ++E+ L ++
Sbjct: 4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWK-ELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 564 RHRNIVKFYGFCSHVRHS--FVVYEYINRGSLATVLSNNFASEDF-DWRKRMNVITGVAD 620
+H NIV++Y ++ ++V EY G LA+V++ + D + V+T +
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 621 ALSYMHH--DCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGY 678
AL H D ++HRD+ NV LD + ++ DFG A++L + E VGT Y
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYY 182
Query: 679 VAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV 715
++P N M EK D++S G L E+
Sbjct: 183 MSPEQMN----------RMSYNEKSDIWSLGCLLYEL 209
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 105/217 (48%), Gaps = 16/217 (7%)
Query: 504 RTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
R +D++ Y IG G + + + S KI V K + + ++++ ++E+ L ++
Sbjct: 4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWK-ELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 564 RHRNIVKFYGFCSHVRHS--FVVYEYINRGSLATVLSNNFASEDF-DWRKRMNVITGVAD 620
+H NIV++Y ++ ++V EY G LA+V++ + D + V+T +
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 621 ALSYMHH--DCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGY 678
AL H D ++HRD+ NV LD + ++ DFG A++L ++S VGT Y
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYY 182
Query: 679 VAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV 715
++P N M EK D++S G L E+
Sbjct: 183 MSPEQMN----------RMSYNEKSDIWSLGCLLYEL 209
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 105/217 (48%), Gaps = 16/217 (7%)
Query: 504 RTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
R +D++ Y IG G + + + S KI V K + + ++++ ++E+ L ++
Sbjct: 4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWK-ELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 564 RHRNIVKFYGFCSHVRHS--FVVYEYINRGSLATVLSNNFASEDF-DWRKRMNVITGVAD 620
+H NIV++Y ++ ++V EY G LA+V++ + D + V+T +
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 621 ALSYMHH--DCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGY 678
AL H D ++HRD+ NV LD + ++ DFG A++L ++S VGT Y
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYY 182
Query: 679 VAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV 715
++P N M EK D++S G L E+
Sbjct: 183 MSPEQMN----------RMSYNEKSDIWSLGCLLYEL 209
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 131/285 (45%), Gaps = 39/285 (13%)
Query: 514 IGKGEHRSVYRAKLPSGDK--IAVKKF---NSPFPNDQMSDQKEFLNEIKALTKIRHRNI 568
IGKG V++ +L DK +A+K +S + + +EF E+ ++ + H NI
Sbjct: 27 IGKGGFGLVHKGRL-VKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 569 VKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHD 628
VK YG + +V E++ G L L + + W ++ ++ +A + YM +
Sbjct: 86 VKLYGLMHNPPR--MVMEFVPCGDLYHRLLDK--AHPIKWSVKLRLMLDIALGIEYMQNQ 141
Query: 629 CFPPIVHRDISSNNVLLDLEYE-----ARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAH 683
PPIVHRD+ S N+ L E A+V+DFG L + + + + L+G F ++AP
Sbjct: 142 N-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFG---LSQQSVHSVSGLLGNFQWMAPE- 196
Query: 684 GNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAML 743
IG A TEK D YSF ++ ++ G+ P D I+F M+
Sbjct: 197 -TIG------AEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG-------KIKFINMI 242
Query: 744 DHRLPHPSL--DVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
P++ D +L +++E LC G P RP + + L
Sbjct: 243 REEGLRPTIPEDCPPRLRNVIE---LCWSGDPKKRPHFSYIVKEL 284
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 125/283 (44%), Gaps = 39/283 (13%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFL-NEIKALTKIRHRNIVKFY 572
IG G VYRA GD++AVK P++ +S E + E K ++H NI+
Sbjct: 15 IGIGGFGKVYRA-FWIGDEVAVKAARHD-PDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 573 GFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPP 632
G C + +V E+ G L VLS D +N +A ++Y+H + P
Sbjct: 73 GVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDI----LVNWAVQIARGMNYLHDEAIVP 128
Query: 633 IVHRDISSNNVLLDLEYE--------ARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHG 684
I+HRD+ S+N+L+ + E +++DFG A+ + + + G + ++AP
Sbjct: 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR--EWHRTTKMSAAGAYAWMAP--- 183
Query: 685 NIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFN-AML 743
E+ ++ DV+S+GVL E++ G+ P + + + AM
Sbjct: 184 -------EVIRASMFSKGSDVWSYGVLLWELLTGEVP-------FRGIDGLAVAYGVAMN 229
Query: 744 DHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
LP PS E +ME C + P+SRP+ + L
Sbjct: 230 KLALPIPS-TCPEPFAKLMED---CWNPDPHSRPSFTNILDQL 268
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
IG G +VY+ K GD +AVK N P Q + F NE+ L K RH NI+ F G
Sbjct: 20 IGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQ--QLQAFKNEVGVLRKTRHVNILLFMG 75
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASE-DFDWRKRMNVITGVADALSYMHHDCFPP 632
+ + + + +V ++ SL L ASE F+ +K +++ A + Y+H
Sbjct: 76 YSTKPQLA-IVTQWCEGSSLYHHL---HASETKFEMKKLIDIARQTARGMDYLHAKS--- 128
Query: 633 IVHRDISSNNVLLDLEYEARVSDFG--TAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ SNN+ L + ++ DFG T K S + +L G+ ++AP +
Sbjct: 129 IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP-------EV 181
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + + DVY+FG++ E++ G+ P
Sbjct: 182 IRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 212
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 128/283 (45%), Gaps = 41/283 (14%)
Query: 514 IGKGEHRSVY--RAKLPSGDKI--AVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
+G GE V R KLPS +I A+K + Q +++FL E + + H NI+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 109
Query: 570 KFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDC 629
+ G + + +V EY+ GSL + L + A F + + ++ G+A + Y+
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSDMG 167
Query: 630 FPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLH 689
+ VHRD+++ N+L++ +VSDFG A++L+ + G G I +
Sbjct: 168 Y---VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRG---------GKIPIR 215
Query: 690 LAE---LAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXXXXXXXXXINIEFNAMLD- 744
+AY K T DV+S+G++ EV+ G+ P N + +D
Sbjct: 216 WTSPEAIAYR-KFTSASDVWSYGIVLWEVMSYGERP---------YWEMSNQDVIKAVDE 265
Query: 745 -HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
+RLP P +D L +M L C N+RP + + +L
Sbjct: 266 GYRLP-PPMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSIL 304
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
IG G +VY+ K GD +AVK N P Q + F NE+ L K RH NI+ F G
Sbjct: 32 IGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQ--QLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASE-DFDWRKRMNVITGVADALSYMHHDCFPP 632
+ + + + +V ++ SL L ASE F+ +K +++ A + Y+H
Sbjct: 88 YSTKPQLA-IVTQWCEGSSLYHHL---HASETKFEMKKLIDIARQTARGMDYLHAKS--- 140
Query: 633 IVHRDISSNNVLLDLEYEARVSDFG--TAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ SNN+ L + ++ DFG T K S + +L G+ ++AP +
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP-------EV 193
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + + DVY+FG++ E++ G+ P
Sbjct: 194 IRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 126/280 (45%), Gaps = 35/280 (12%)
Query: 514 IGKGEHRSVY--RAKLPSGDKI--AVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
+G GE V R KLPS +I A+K + Q +++FL E + + H NI+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 109
Query: 570 KFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDC 629
+ G + + +V EY+ GSL + L + A F + + ++ G+A + Y+
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSDMG 167
Query: 630 FPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLH 689
F VHRD+++ N+L++ +VSDFG +++L+ + T G P I
Sbjct: 168 F---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE---AAYTTRGGKIP----IRWT 217
Query: 690 LAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXXXXXXXXXINIEFNAMLD--HR 746
E K T DV+S+G++ EV+ G+ P N + +D +R
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---------YWEMSNQDVIKAVDEGYR 268
Query: 747 LPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
LP P +D L +M L C N+RP + + +L
Sbjct: 269 LP-PPMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSIL 304
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
IG G +VY+ K GD +AVK N P Q + F NE+ L K RH NI+ F G
Sbjct: 32 IGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQ--QLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASE-DFDWRKRMNVITGVADALSYMHHDCFPP 632
+ + + + +V ++ SL L ASE F+ +K +++ A + Y+H
Sbjct: 88 YSTAPQLA-IVTQWCEGSSLYHHL---HASETKFEMKKLIDIARQTARGMDYLHAKS--- 140
Query: 633 IVHRDISSNNVLLDLEYEARVSDFG--TAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ SNN+ L + ++ DFG T K S + +L G+ ++AP +
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP-------EV 193
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + + DVY+FG++ E++ G+ P
Sbjct: 194 IRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 130/285 (45%), Gaps = 39/285 (13%)
Query: 514 IGKGEHRSVYRAKLPSGDK--IAVKKF---NSPFPNDQMSDQKEFLNEIKALTKIRHRNI 568
IGKG V++ +L DK +A+K +S + + +EF E+ ++ + H NI
Sbjct: 27 IGKGGFGLVHKGRL-VKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 569 VKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHD 628
VK YG + +V E++ G L L + + W ++ ++ +A + YM +
Sbjct: 86 VKLYGLMHNPPR--MVMEFVPCGDLYHRLLDK--AHPIKWSVKLRLMLDIALGIEYMQNQ 141
Query: 629 CFPPIVHRDISSNNVLLDLEYE-----ARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAH 683
PPIVHRD+ S N+ L E A+V+DF L + + + + L+G F ++AP
Sbjct: 142 N-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFS---LSQQSVHSVSGLLGNFQWMAPE- 196
Query: 684 GNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAML 743
IG A TEK D YSF ++ ++ G+ P D I+F M+
Sbjct: 197 -TIG------AEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG-------KIKFINMI 242
Query: 744 DHRLPHPSL--DVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
P++ D +L +++E LC G P RP + + L
Sbjct: 243 REEGLRPTIPEDCPPRLRNVIE---LCWSGDPKKRPHFSYIVKEL 284
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 19/210 (9%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
IG G +VY+ K GD +AVK N P Q + F NE+ L K RH NI+ F G
Sbjct: 16 IGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQ--QLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
+ + + + +V ++ SL L + F+ K +++ A + Y+H I
Sbjct: 72 YSTKPQLA-IVTQWCEGSSLYHHL--HIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 634 VHRDISSNNVLLDLEYEARVSDFG--TAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLA 691
+HRD+ SNN+ L + ++ DFG T K S + +L G+ ++AP +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP-------EVI 178
Query: 692 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + DVY+FG++ E++ G+ P
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 19/210 (9%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
IG G +VY+ K GD +AVK N P Q + F NE+ L K RH NI+ F G
Sbjct: 21 IGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQ--QLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
+ + + + +V ++ SL L + F+ K +++ A + Y+H I
Sbjct: 77 YSTKPQLA-IVTQWCEGSSLYHHL--HIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 130
Query: 634 VHRDISSNNVLLDLEYEARVSDFG--TAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLA 691
+HRD+ SNN+ L + ++ DFG T K S + +L G+ ++AP +
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP-------EVI 183
Query: 692 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + DVY+FG++ E++ G+ P
Sbjct: 184 RMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 128/283 (45%), Gaps = 41/283 (14%)
Query: 514 IGKGEHRSVY--RAKLPSGDKI--AVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
+G GE V R KLPS +I A+K + Q +++FL E + + H NI+
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 97
Query: 570 KFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDC 629
+ G + + +V EY+ GSL + L + A F + + ++ G+A + Y+
Sbjct: 98 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSDMG 155
Query: 630 FPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLH 689
+ VHRD+++ N+L++ +VSDFG +++L+ + G G I +
Sbjct: 156 Y---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG---------GKIPIR 203
Query: 690 LAE---LAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXXXXXXXXXINIEFNAMLD- 744
+AY K T DV+S+G++ EV+ G+ P N + +D
Sbjct: 204 WTSPEAIAYR-KFTSASDVWSYGIVLWEVMSYGERP---------YWEMSNQDVIKAVDE 253
Query: 745 -HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
+RLP P +D L +M L C N+RP + + +L
Sbjct: 254 GYRLP-PPMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSIL 292
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 19/210 (9%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
IG G +VY+ K GD +AVK N P Q + F NE+ L K RH NI+ F G
Sbjct: 18 IGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQ--QLQAFKNEVGVLRKTRHVNILLFMG 73
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
+ + + + +V ++ SL L + F+ K +++ A + Y+H I
Sbjct: 74 YSTKPQLA-IVTQWCEGSSLYHHL--HIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 127
Query: 634 VHRDISSNNVLLDLEYEARVSDFG--TAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLA 691
+HRD+ SNN+ L + ++ DFG T K S + +L G+ ++AP +
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP-------EVI 180
Query: 692 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + DVY+FG++ E++ G+ P
Sbjct: 181 RMQDKNPYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 19/210 (9%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
IG G +VY+ K GD +AVK N P Q + F NE+ L K RH NI+ F G
Sbjct: 21 IGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQ--QLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
+ + + + +V ++ SL L + F+ K +++ A + Y+H I
Sbjct: 77 YSTKPQLA-IVTQWCEGSSLYHHL--HIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 130
Query: 634 VHRDISSNNVLLDLEYEARVSDFG--TAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLA 691
+HRD+ SNN+ L + ++ DFG T K S + +L G+ ++AP +
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP-------EVI 183
Query: 692 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + DVY+FG++ E++ G+ P
Sbjct: 184 RMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 126/280 (45%), Gaps = 35/280 (12%)
Query: 514 IGKGEHRSVY--RAKLPSGDKI--AVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
+G GE V R KLPS +I A+K + Q +++FL E + + H NI+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 109
Query: 570 KFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDC 629
+ G + + +V EY+ GSL + L + A F + + ++ G+A + Y+
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSDMG 167
Query: 630 FPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLH 689
+ VHRD+++ N+L++ +VSDFG +++L+ + T G P I
Sbjct: 168 Y---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE---AAYTTRGGKIP----IRWT 217
Query: 690 LAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXXXXXXXXXINIEFNAMLD--HR 746
E K T DV+S+G++ EV+ G+ P N + +D +R
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---------YWEMSNQDVIKAVDEGYR 268
Query: 747 LPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
LP P +D L +M L C N+RP + + +L
Sbjct: 269 LP-PPMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSIL 304
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 106/243 (43%), Gaps = 38/243 (15%)
Query: 550 QKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWR 609
Q+ FL E+K + + H N++KF G + + EYI G+L ++ + + W
Sbjct: 51 QRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKS--MDSQYPWS 108
Query: 610 KRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLL------- 662
+R++ +A ++Y+H I+HRD++S+N L+ V+DFG A+L+
Sbjct: 109 QRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165
Query: 663 -------KPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV 715
KP+ +VG ++AP E+ EK DV+SFG++ E+
Sbjct: 166 EGLRSLKKPDRKKRYTVVGNPYWMAP----------EMINGRSYDEKVDVFSFGIVLCEI 215
Query: 716 IKGKHPGDXXXXXXXXXXXINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNS 775
I G+ D +N+ LD P P+ S + + C D P
Sbjct: 216 I-GRVNADPDYLPRTMDFGLNV--RGFLDRYCP-PNCPP-----SFFPITVRCCDLDPEK 266
Query: 776 RPT 778
RP+
Sbjct: 267 RPS 269
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 19/210 (9%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
IG G +VY+ K GD +AVK N P Q + F NE+ L K RH NI+ F G
Sbjct: 44 IGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQ--QLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
+ + + + +V ++ SL L + F+ K +++ A + Y+H I
Sbjct: 100 YSTKPQLA-IVTQWCEGSSLYHHL--HIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 153
Query: 634 VHRDISSNNVLLDLEYEARVSDFG--TAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLA 691
+HRD+ SNN+ L + ++ DFG T K S + +L G+ ++AP +
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP-------EVI 206
Query: 692 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + DVY+FG++ E++ G+ P
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 125/280 (44%), Gaps = 35/280 (12%)
Query: 514 IGKGEHRSVY--RAKLPSGDKI--AVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
+G GE V R KLPS +I A+K + Q +++FL E + + H NI+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 109
Query: 570 KFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDC 629
+ G + + +V EY+ GSL + L + A F + + ++ G+A + Y+
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSDMG 167
Query: 630 FPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLH 689
+ VHRD+++ N+L++ +VSDFG ++L+ + T G P I
Sbjct: 168 Y---VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPE---AAYTTRGGKIP----IRWT 217
Query: 690 LAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXXXXXXXXXINIEFNAMLD--HR 746
E K T DV+S+G++ EV+ G+ P N + +D +R
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---------YWEMSNQDVIKAVDEGYR 268
Query: 747 LPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
LP P +D L +M L C N+RP + + +L
Sbjct: 269 LP-PPMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 128/283 (45%), Gaps = 41/283 (14%)
Query: 514 IGKGEHRSVY--RAKLPSGDKI--AVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
+G GE V R KLPS +I A+K + Q +++FL E + + H NI+
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 80
Query: 570 KFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDC 629
+ G + + +V EY+ GSL + L + A F + + ++ G+A + Y+
Sbjct: 81 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSDMG 138
Query: 630 FPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLH 689
+ VHRD+++ N+L++ +VSDFG +++L+ + G G I +
Sbjct: 139 Y---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG---------GKIPIR 186
Query: 690 LAE---LAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXXXXXXXXXINIEFNAMLD- 744
+AY K T DV+S+G++ EV+ G+ P N + +D
Sbjct: 187 WTSPEAIAYR-KFTSASDVWSYGIVLWEVMSYGERP---------YWEMSNQDVIKAVDE 236
Query: 745 -HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
+RLP P +D L +M L C N+RP + + +L
Sbjct: 237 GYRLP-PPMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSIL 275
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 128/283 (45%), Gaps = 41/283 (14%)
Query: 514 IGKGEHRSVY--RAKLPSGDKI--AVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
+G GE V R KLPS +I A+K + Q +++FL E + + H NI+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 109
Query: 570 KFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDC 629
+ G + + +V EY+ GSL + L + A F + + ++ G+A + Y+
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSDMG 167
Query: 630 FPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLH 689
+ VHRD+++ N+L++ +VSDFG +++L+ + G G I +
Sbjct: 168 Y---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG---------GKIPIR 215
Query: 690 LAE---LAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXXXXXXXXXINIEFNAMLD- 744
+AY K T DV+S+G++ EV+ G+ P N + +D
Sbjct: 216 WTSPEAIAYR-KFTSASDVWSYGIVLWEVMSYGERP---------YWEMSNQDVIKAVDE 265
Query: 745 -HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
+RLP P +D L +M L C N+RP + + +L
Sbjct: 266 GYRLP-PPMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 128/283 (45%), Gaps = 41/283 (14%)
Query: 514 IGKGEHRSVY--RAKLPSGDKI--AVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
+G GE V R KLPS +I A+K + Q +++FL E + + H NI+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 109
Query: 570 KFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDC 629
+ G + + +V EY+ GSL + L + A F + + ++ G+A + Y+
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSDMG 167
Query: 630 FPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLH 689
+ VHRD+++ N+L++ +VSDFG +++L+ + G G I +
Sbjct: 168 Y---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG---------GKIPIR 215
Query: 690 LAE---LAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXXXXXXXXXINIEFNAMLD- 744
+AY K T DV+S+G++ EV+ G+ P N + +D
Sbjct: 216 WTSPEAIAYR-KFTSASDVWSYGIVLWEVMSYGERP---------YWEMSNQDVIKAVDE 265
Query: 745 -HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
+RLP P +D L +M L C N+RP + + +L
Sbjct: 266 GYRLP-PPMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSIL 304
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 19/210 (9%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
IG G +VY+ K GD +AVK N P Q + F NE+ L K RH NI+ F G
Sbjct: 16 IGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQ--QLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
+ + + + +V ++ SL L + F+ K +++ A + Y+H I
Sbjct: 72 YSTAPQLA-IVTQWCEGSSLYHHL--HIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 634 VHRDISSNNVLLDLEYEARVSDFG--TAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLA 691
+HRD+ SNN+ L + ++ DFG T K S + +L G+ ++AP +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP-------EVI 178
Query: 692 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + DVY+FG++ E++ G+ P
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 127/286 (44%), Gaps = 41/286 (14%)
Query: 500 EIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKA 559
EI R + + K +G+G V+ ++A+K MS + FL E +
Sbjct: 11 EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKP----GTMSPEA-FLQEAQV 63
Query: 560 LTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVA 619
+ K+RH +V+ Y S ++V EY+N+GSL L + + +++ +A
Sbjct: 64 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGE-TGKYLRLPQLVDMSAQIA 121
Query: 620 DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYV 679
++Y+ + VHRD+ + N+L+ +V+DFG A+L++ N WT G
Sbjct: 122 SGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDN--EWTARQG----- 171
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV-IKGK--HPGDXXXXXXXXXXXIN 736
A I E A + T K DV+SFG+L E+ KG+ +PG +N
Sbjct: 172 --AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG-----------MVN 218
Query: 737 IEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQ 780
E ++ +R+P P + E L +M C P RPT +
Sbjct: 219 REVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRKEPEERPTFE 260
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 19/210 (9%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
IG G +VY+ K GD +AVK N P Q + F NE+ L K RH NI+ F G
Sbjct: 43 IGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQ--QLQAFKNEVGVLRKTRHVNILLFMG 98
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
+ + + + +V ++ SL L + F+ K +++ A + Y+H I
Sbjct: 99 YSTKPQLA-IVTQWCEGSSLYHHL--HIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 152
Query: 634 VHRDISSNNVLLDLEYEARVSDFG--TAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLA 691
+HRD+ SNN+ L + ++ DFG T K S + +L G+ ++AP +
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP-------EVI 205
Query: 692 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + DVY+FG++ E++ G+ P
Sbjct: 206 RMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 128/283 (45%), Gaps = 41/283 (14%)
Query: 514 IGKGEHRSVY--RAKLPSGDKI--AVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
+G GE V R KLPS +I A+K + Q +++FL E + + H NI+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 109
Query: 570 KFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDC 629
+ G + + +V EY+ GSL + L + A F + + ++ G+A + Y+
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSDMG 167
Query: 630 FPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLH 689
+ VHRD+++ N+L++ +VSDFG +++L+ + G G I +
Sbjct: 168 Y---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG---------GKIPIR 215
Query: 690 LAE---LAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXXXXXXXXXINIEFNAMLD- 744
+AY K T DV+S+G++ EV+ G+ P N + +D
Sbjct: 216 WTSPEAIAYR-KFTSASDVWSYGIVLWEVMSYGERP---------YWEMSNQDVIKAVDE 265
Query: 745 -HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
+RLP P +D L +M L C N+RP + + +L
Sbjct: 266 GYRLP-PPMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSIL 304
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 19/210 (9%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
IG G +VY+ K GD +AVK N P Q + F NE+ L K RH NI+ F G
Sbjct: 16 IGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQ--QLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
+ + + + +V ++ SL L + F+ K +++ A + Y+H I
Sbjct: 72 YSTKPQLA-IVTQWCEGSSLYHHL--HIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 634 VHRDISSNNVLLDLEYEARVSDFG--TAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLA 691
+HRD+ SNN+ L + ++ DFG T K S + +L G+ ++AP +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP-------EVI 178
Query: 692 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + DVY+FG++ E++ G+ P
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 128/283 (45%), Gaps = 41/283 (14%)
Query: 514 IGKGEHRSVY--RAKLPSGDKI--AVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
+G GE V R KLPS +I A+K + Q +++FL E + + H NI+
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 107
Query: 570 KFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDC 629
+ G + + +V EY+ GSL + L + A F + + ++ G+A + Y+
Sbjct: 108 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSDMG 165
Query: 630 FPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLH 689
+ VHRD+++ N+L++ +VSDFG +++L+ + G G I +
Sbjct: 166 Y---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG---------GKIPIR 213
Query: 690 LAE---LAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXXXXXXXXXINIEFNAMLD- 744
+AY K T DV+S+G++ EV+ G+ P N + +D
Sbjct: 214 WTSPEAIAYR-KFTSASDVWSYGIVLWEVMSYGERP---------YWEMSNQDVIKAVDE 263
Query: 745 -HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
+RLP P +D L +M L C N+RP + + +L
Sbjct: 264 GYRLP-PPMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSIL 302
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 19/210 (9%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
IG G +VY+ K GD +AVK N P Q + F NE+ L K RH NI+ F G
Sbjct: 44 IGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQ--QLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
+ + + + +V ++ SL L + F+ K +++ A + Y+H I
Sbjct: 100 YSTKPQLA-IVTQWCEGSSLYHHL--HIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 153
Query: 634 VHRDISSNNVLLDLEYEARVSDFG--TAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLA 691
+HRD+ SNN+ L + ++ DFG T K S + +L G+ ++AP +
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP-------EVI 206
Query: 692 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + DVY+FG++ E++ G+ P
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 19/210 (9%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
IG G +VY+ K GD +AVK N P Q + F NE+ L K RH NI+ F G
Sbjct: 36 IGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQ--QLQAFKNEVGVLRKTRHVNILLFMG 91
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
+ + + + +V ++ SL L + F+ K +++ A + Y+H I
Sbjct: 92 YSTKPQLA-IVTQWCEGSSLYHHL--HIIETKFEMIKLIDIARQTAQGMDYLHAKS---I 145
Query: 634 VHRDISSNNVLLDLEYEARVSDFG--TAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLA 691
+HRD+ SNN+ L + ++ DFG T K S + +L G+ ++AP +
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP-------EVI 198
Query: 692 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + DVY+FG++ E++ G+ P
Sbjct: 199 RMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 122/276 (44%), Gaps = 35/276 (12%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
+G G+ V+ K+A+K MS + FL E + + K++H +V+ Y
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKP----GTMSPES-FLEEAQIMKKLKHDKLVQLYA 71
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
S ++V EY+N+GSL L + +++ VA ++Y+ +
Sbjct: 72 VVSE-EPIYIVTEYMNKGSLLDFLKDG-EGRALKLPNLVDMAAQVAAGMAYIERMNY--- 126
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAEL 693
+HRD+ S N+L+ +++DFG A+L++ N E G P I E
Sbjct: 127 IHRDLRSANILVGNGLICKIADFGLARLIEDN-----EXTARQGAKFP----IKWTAPEA 177
Query: 694 AYTMKITEKCDVYSFGVLALEVI-KGKHPGDXXXXXXXXXXXINIEFNAMLD--HRLPHP 750
A + T K DV+SFG+L E++ KG+ P N E ++ +R+P P
Sbjct: 178 ALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN---------NREVLEQVERGYRMPCP 228
Query: 751 SLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
Q+ IS+ E+ + C P RPT + + L
Sbjct: 229 ----QDCPISLHELMIHCWKKDPEERPTFEYLQSFL 260
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 102/236 (43%), Gaps = 22/236 (9%)
Query: 507 DFDAKYCIGKGEHRSVYRAKLPSGDKIAVKK--FNSPFPNDQMSDQKEFLNEIKALTKIR 564
DFD +GKG+ +VY A+ I K F S + + Q EI+ + +R
Sbjct: 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ--LRREIEIQSHLR 72
Query: 565 HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSY 624
H NI++ Y + + +++ E+ RG L L + FD ++ + +ADAL Y
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR---FDEQRSATFMEELADALHY 129
Query: 625 MHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHG 684
H ++HRDI N+L+ + E +++DFG + + S + GT Y+ P
Sbjct: 130 CHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPP--- 181
Query: 685 NIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFN 740
E+ EK D++ GVL E + G P D +N++
Sbjct: 182 -------EMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLK 230
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 102/236 (43%), Gaps = 22/236 (9%)
Query: 507 DFDAKYCIGKGEHRSVYRAKLPSGDKIAVKK--FNSPFPNDQMSDQKEFLNEIKALTKIR 564
DFD +GKG+ +VY A+ I K F S + + Q EI+ + +R
Sbjct: 16 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ--LRREIEIQSHLR 73
Query: 565 HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSY 624
H NI++ Y + + +++ E+ RG L L + FD ++ + +ADAL Y
Sbjct: 74 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR---FDEQRSATFMEELADALHY 130
Query: 625 MHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHG 684
H ++HRDI N+L+ + E +++DFG + + S + GT Y+ P
Sbjct: 131 CHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPP--- 182
Query: 685 NIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFN 740
E+ EK D++ GVL E + G P D +N++
Sbjct: 183 -------EMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLK 231
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 124/280 (44%), Gaps = 33/280 (11%)
Query: 514 IGKGEHRSVYRA--KLPSGDKI--AVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
IG GE V KLP +I A+K S + Q +++FL+E + + H N++
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQ---RRDFLSEASIMGQFDHPNVI 97
Query: 570 KFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDC 629
G + ++ E++ GSL + L N F + + ++ G+A + Y+
Sbjct: 98 HLEGVVTKSTPVMIITEFMENGSLDSFLRQN--DGQFTVIQLVGMLRGIAAGMKYLADMN 155
Query: 630 FPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLH 689
+ VHRD+++ N+L++ +VSDFG ++ L+ ++S+ T Y + G I +
Sbjct: 156 Y---VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPT-------YTSALGGKIPIR 205
Query: 690 LA--ELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXIN-IEFNAMLDHR 746
E K T DV+S+G++ EV+ G+ IN IE D+R
Sbjct: 206 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSY---GERPYWDMTNQDVINAIE----QDYR 258
Query: 747 LPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
LP P +D L +M L C N RP + L
Sbjct: 259 LP-PPMDCPSALHQLM---LDCWQKDRNHRPKFGQIVNTL 294
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 102/236 (43%), Gaps = 22/236 (9%)
Query: 507 DFDAKYCIGKGEHRSVYRAKLPSGDKIAVKK--FNSPFPNDQMSDQKEFLNEIKALTKIR 564
DFD +GKG+ +VY A+ I K F S + + Q EI+ + +R
Sbjct: 15 DFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ--LRREIEIQSHLR 72
Query: 565 HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSY 624
H NI++ Y + + +++ E+ RG L L + FD ++ + +ADAL Y
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR---FDEQRSATFMEELADALHY 129
Query: 625 MHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHG 684
H ++HRDI N+L+ + E +++DFG + + S + GT Y+ P
Sbjct: 130 CHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPP--- 181
Query: 685 NIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFN 740
E+ EK D++ GVL E + G P D +N++
Sbjct: 182 -------EMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLK 230
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 113/244 (46%), Gaps = 34/244 (13%)
Query: 487 HSVLDFDGKIMYEEIIRRTKDFDAKYCIGKGEHRSVYRA--KLPSGDK---IAVKKFNSP 541
+VL F +I + + R K IG GE VY+ K SG K +A+K +
Sbjct: 32 QAVLKFTTEI-HPSCVTRQK------VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG 84
Query: 542 FPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNF 601
+ Q D FL E + + H NI++ G S + ++ EY+ G+L L
Sbjct: 85 YTEKQRVD---FLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREK- 140
Query: 602 ASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKL 661
+F + + ++ G+A + Y+ + + VHRD+++ N+L++ +VSDFG +++
Sbjct: 141 -DGEFSVLQLVGMLRGIAAGMKYLANMNY---VHRDLAARNILVNSNLVCKVSDFGLSRV 196
Query: 662 LKPN-SSNWTELVGTFG--YVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK- 717
L+ + + +T G + AP E K T DV+SFG++ EV+
Sbjct: 197 LEDDPEATYTTSGGKIPIRWTAP----------EAISYRKFTSASDVWSFGIVMWEVMTY 246
Query: 718 GKHP 721
G+ P
Sbjct: 247 GERP 250
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 106/216 (49%), Gaps = 24/216 (11%)
Query: 508 FDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFL-NEIKALTKIRH 565
D+ IG+G V A+ SG ++AVK + + ++E L NE+ + +H
Sbjct: 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDL-----RKQQRRELLFNEVVIMRDYQH 101
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
N+V+ Y +V+ E++ G+L ++S +E+ + V V AL+Y+
Sbjct: 102 FNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEE----QIATVCEAVLQALAYL 157
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
H ++HRDI S+++LL L+ ++SDFG + + LVGT ++AP +
Sbjct: 158 HAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVIS 214
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
L+ E+ D++S G++ +E++ G+ P
Sbjct: 215 RSLYATEV----------DIWSLGIMVIEMVDGEPP 240
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 123/281 (43%), Gaps = 37/281 (13%)
Query: 514 IGKGEHRSVY--RAKLPSGDK--IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
IG GE V R KLP + +A+K + Q +++FL E + + H NI+
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 86
Query: 570 KFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDC 629
G + + +V EY+ GSL T L N F + + ++ G++ + Y+
Sbjct: 87 HLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ--FTVIQLVGMLRGISAGMKYLSDMG 144
Query: 630 FPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPN-SSNWTELVGTFGYVAPAHGNIGL 688
+ VHRD+++ N+L++ +VSDFG +++L+ + + +T G A I
Sbjct: 145 Y---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAF 201
Query: 689 HLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXXXXXXXXXINIEFNAMLD--H 745
K T DV+S+G++ EV+ G+ P N + ++ +
Sbjct: 202 R--------KFTSASDVWSYGIVMWEVVSYGERP---------YWEMTNQDVIKAVEEGY 244
Query: 746 RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
RLP P +D L +M L C NSRP + +L
Sbjct: 245 RLPSP-MDCPAALYQLM---LDCWQKERNSRPKFDEIVNML 281
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 125/296 (42%), Gaps = 54/296 (18%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRAKLPSGD-KIAVKKFNSPFPNDQMSDQKEFLNEIKAL 560
+ RT D K+ +G G++ VY +AVK D M + +EFL E +
Sbjct: 11 MERT-DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTM-EVEEFLKEAAVM 64
Query: 561 TKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVI----- 615
+I+H N+V+ G C+ +++ E++ G+L L R+ +N +
Sbjct: 65 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-------RQEVNAVVLLYM 117
Query: 616 -TGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG 674
T ++ A+ Y+ F +HRD+++ N L+ + +V+DFG ++L+ ++
Sbjct: 118 ATQISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-------- 166
Query: 675 TFGYVAPAHGNIGLHLA---ELAYTMKITEKCDVYSFGVLALEVIK---GKHPGDXXXXX 728
Y APA + LAY K + K DV++FGVL E+ +PG
Sbjct: 167 ---YTAPAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 222
Query: 729 XXXXXXINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
D+R+ P EK+ +M C P+ RP+ + Q
Sbjct: 223 YELLEK---------DYRMERPE-GCPEKVYELMRA---CWQWNPSDRPSFAEIHQ 265
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 125/296 (42%), Gaps = 54/296 (18%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRAKLPSGD-KIAVKKFNSPFPNDQMSDQKEFLNEIKAL 560
+ RT D K+ +G G++ VY +AVK D M + +EFL E +
Sbjct: 12 MERT-DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTM-EVEEFLKEAAVM 65
Query: 561 TKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVI----- 615
+I+H N+V+ G C+ +++ E++ G+L L R+ +N +
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-------RQEVNAVVLLYM 118
Query: 616 -TGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG 674
T ++ A+ Y+ F +HRD+++ N L+ + +V+DFG ++L+ ++
Sbjct: 119 ATQISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-------- 167
Query: 675 TFGYVAPAHGNIGLHLA---ELAYTMKITEKCDVYSFGVLALEVIK---GKHPGDXXXXX 728
Y APA + LAY K + K DV++FGVL E+ +PG
Sbjct: 168 ---YTAPAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 223
Query: 729 XXXXXXINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
D+R+ P EK+ +M C P+ RP+ + Q
Sbjct: 224 YELLEK---------DYRMERPE-GCPEKVYELMRA---CWQWNPSDRPSFAEIHQ 266
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 41/283 (14%)
Query: 514 IGKGEHRSVY--RAKLPSGDKI--AVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
+G GE V R KLPS +I A+K + Q +++FL E + + H NI+
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 80
Query: 570 KFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDC 629
+ G + + +V E + GSL + L + A F + + ++ G+A + Y+
Sbjct: 81 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSDMG 138
Query: 630 FPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLH 689
+ VHRD+++ N+L++ +VSDFG +++L+ + G G I +
Sbjct: 139 Y---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG---------GKIPIR 186
Query: 690 LAE---LAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXXXXXXXXXINIEFNAMLD- 744
+AY K T DV+S+G++ EV+ G+ P N + +D
Sbjct: 187 WTSPEAIAYR-KFTSASDVWSYGIVLWEVMSYGERP---------YWEMSNQDVIKAVDE 236
Query: 745 -HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
+RLP P +D L +M L C N+RP + + +L
Sbjct: 237 GYRLP-PPMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSIL 275
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 41/283 (14%)
Query: 514 IGKGEHRSVY--RAKLPSGDKI--AVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
+G GE V R KLPS +I A+K + Q +++FL E + + H NI+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 109
Query: 570 KFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDC 629
+ G + + +V E + GSL + L + A F + + ++ G+A + Y+
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSDMG 167
Query: 630 FPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLH 689
+ VHRD+++ N+L++ +VSDFG +++L+ + G G I +
Sbjct: 168 Y---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG---------GKIPIR 215
Query: 690 LAE---LAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXXXXXXXXXINIEFNAMLD- 744
+AY K T DV+S+G++ EV+ G+ P N + +D
Sbjct: 216 WTSPEAIAYR-KFTSASDVWSYGIVLWEVMSYGERP---------YWEMSNQDVIKAVDE 265
Query: 745 -HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
+RLP P +D L +M L C N+RP + + +L
Sbjct: 266 GYRLP-PPMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSIL 304
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 125/286 (43%), Gaps = 41/286 (14%)
Query: 500 EIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKA 559
EI R + + K +G+G V+ ++A+K MS + FL E +
Sbjct: 14 EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKP----GTMSPEA-FLQEAQV 66
Query: 560 LTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVA 619
+ KIRH +V+ Y S ++V EY+++GSL L + +++ +A
Sbjct: 67 MKKIRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIA 124
Query: 620 DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYV 679
++Y+ + VHRD+ + N+L+ +V+DFG A+L++ N E G
Sbjct: 125 SGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDN-----EYTARQGAK 176
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV-IKGK--HPGDXXXXXXXXXXXIN 736
P I E A + T K DV+SFG+L E+ KG+ +PG +N
Sbjct: 177 FP----IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG-----------MVN 221
Query: 737 IEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQ 780
E ++ +R+P P + E L +M C P RPT +
Sbjct: 222 REVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRKDPEERPTFE 263
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 126/286 (44%), Gaps = 41/286 (14%)
Query: 500 EIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKA 559
EI R + + K +G+G V+ ++A+K MS + FL E +
Sbjct: 11 EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKP----GTMSPEA-FLQEAQV 63
Query: 560 LTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVA 619
+ K+RH +V+ Y S ++V EY+N+GSL L + + +++ +A
Sbjct: 64 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGE-TGKYLRLPQLVDMSAQIA 121
Query: 620 DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYV 679
++Y+ + VHRD+ + N+L+ +V+DFG A+L++ N E G
Sbjct: 122 SGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDN-----EYTARQGAK 173
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV-IKGK--HPGDXXXXXXXXXXXIN 736
P I E A + T K DV+SFG+L E+ KG+ +PG +N
Sbjct: 174 FP----IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG-----------MVN 218
Query: 737 IEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQ 780
E ++ +R+P P + E L +M C P RPT +
Sbjct: 219 REVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRKEPEERPTFE 260
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 26/212 (12%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
IG G+ V+ + DK+A+K MS++ +F+ E + + K+ H +V+ YG
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR----EGAMSEE-DFIEEAEVMMKLSHPKLVQLYG 69
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNN---FASEDFDWRKRMNVITGVADALSYMHHDCF 630
C +V+E++ G L+ L FA+E + + V + ++Y+ C
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC- 123
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
++HRD+++ N L+ +VSDFG + + + +T GT V A
Sbjct: 124 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWAS------- 172
Query: 691 AELAYTMKITEKCDVYSFGVLALEVI-KGKHP 721
E+ + + K DV+SFGVL EV +GK P
Sbjct: 173 PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 204
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 126/286 (44%), Gaps = 41/286 (14%)
Query: 500 EIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKA 559
EI R + + K +G+G V+ ++A+K MS + FL E +
Sbjct: 14 EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKP----GTMSPEA-FLQEAQV 66
Query: 560 LTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVA 619
+ K+RH +V+ Y S ++V EY+++GSL L + +++ +A
Sbjct: 67 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIA 124
Query: 620 DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYV 679
++Y+ + VHRD+++ N+L+ +V+DFG A+L++ N E G
Sbjct: 125 SGMAYVERMNY---VHRDLAAANILVGENLVCKVADFGLARLIEDN-----EYTARQGAK 176
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV-IKGK--HPGDXXXXXXXXXXXIN 736
P I E A + T K DV+SFG+L E+ KG+ +PG +N
Sbjct: 177 FP----IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG-----------MVN 221
Query: 737 IEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQ 780
E ++ +R+P P + E L +M C P RPT +
Sbjct: 222 REVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRKDPEERPTFE 263
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 26/212 (12%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
IG G+ V+ + DK+A+K MS++ +F+ E + + K+ H +V+ YG
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIR----EGAMSEE-DFIEEAEVMMKLSHPKLVQLYG 72
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNN---FASEDFDWRKRMNVITGVADALSYMHHDCF 630
C +V+E++ G L+ L FA+E + + V + ++Y+ C
Sbjct: 73 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC- 126
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
++HRD+++ N L+ +VSDFG + + + +T GT V A
Sbjct: 127 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWAS------- 175
Query: 691 AELAYTMKITEKCDVYSFGVLALEVI-KGKHP 721
E+ + + K DV+SFGVL EV +GK P
Sbjct: 176 PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 207
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 26/212 (12%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
IG G+ V+ + DK+A+K MS++ +F+ E + + K+ H +V+ YG
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIR----EGAMSEE-DFIEEAEVMMKLSHPKLVQLYG 67
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNN---FASEDFDWRKRMNVITGVADALSYMHHDCF 630
C +V+E++ G L+ L FA+E + + V + ++Y+ C
Sbjct: 68 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC- 121
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
++HRD+++ N L+ +VSDFG + + + +T GT V A
Sbjct: 122 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWAS------- 170
Query: 691 AELAYTMKITEKCDVYSFGVLALEVI-KGKHP 721
E+ + + K DV+SFGVL EV +GK P
Sbjct: 171 PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 202
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 99/212 (46%), Gaps = 26/212 (12%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
IG G+ V+ + DK+A+K MS+ +F+ E + + K+ H +V+ YG
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIK----EGSMSED-DFIEEAEVMMKLSHPKLVQLYG 89
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNN---FASEDFDWRKRMNVITGVADALSYMHHDCF 630
C +V+E++ G L+ L FA+E + + V + ++Y+ C
Sbjct: 90 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC- 143
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
++HRD+++ N L+ +VSDFG + + + +T GT V A
Sbjct: 144 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWAS------- 192
Query: 691 AELAYTMKITEKCDVYSFGVLALEVI-KGKHP 721
E+ + + K DV+SFGVL EV +GK P
Sbjct: 193 PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 224
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 32/210 (15%)
Query: 513 CIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFL-NEIKALTKIRHRNIVKF 571
CI +H +G ++AVKK + + ++E L NE+ + H N+V
Sbjct: 62 CIATEKH---------TGKQVAVKKMDL-----RKQQRRELLFNEVVIMRDYHHDNVVDM 107
Query: 572 YGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFP 631
Y +VV E++ G+L ++++ +E+ + V V ALSY+H+
Sbjct: 108 YSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIATVCLSVLRALSYLHNQG-- 161
Query: 632 PIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLA 691
++HRDI S+++LL + ++SDFG + LVGT ++AP
Sbjct: 162 -VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAP---------- 210
Query: 692 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
E+ + + D++S G++ +E+I G+ P
Sbjct: 211 EVISRLPYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 124/280 (44%), Gaps = 35/280 (12%)
Query: 514 IGKGEHRSVY--RAKLPSGDKI--AVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
+G GE V R KLPS +I A+K + Q +++FL E + + H NI+
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ---RRDFLGEASIMGQFDHPNII 109
Query: 570 KFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDC 629
+ G + + +V E + GSL + L + A F + + ++ G+A + Y+
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSD-- 165
Query: 630 FPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLH 689
VHRD+++ N+L++ +VSDFG +++L+ + T G P I
Sbjct: 166 -MGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE---AAYTTRGGKIP----IRWT 217
Query: 690 LAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXXXXXXXXXINIEFNAMLD--HR 746
E K T DV+S+G++ EV+ G+ P N + +D +R
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---------YWEMSNQDVIKAVDEGYR 268
Query: 747 LPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
LP P +D L +M L C N+RP + + +L
Sbjct: 269 LP-PPMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 131/293 (44%), Gaps = 43/293 (14%)
Query: 500 EIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKA 559
EI R + + K +G G+ V+ A K+AVK MS + FL E
Sbjct: 11 EIPRESLKLEKK--LGAGQFGEVWMATYNKHTKVAVKTMKP----GSMSVEA-FLAEANV 63
Query: 560 LTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVA 619
+ ++H +VK + + +++ E++ +GSL L ++ S+ K ++ +A
Sbjct: 64 MKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIA 121
Query: 620 DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG-TFGY 678
+ ++++ + +HRD+ + N+L+ +++DFG A++++ N E +
Sbjct: 122 EGMAFIEQRNY---IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKW 178
Query: 679 VAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI---KGKHPGDXXXXXXXXXXXI 735
AP N G T K DV+SFG+L +E++ + +PG
Sbjct: 179 TAPEAINFG----------SFTIKSDVWSFGILLMEIVTYGRIPYPG-----------MS 217
Query: 736 NIEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
N E L+ +R+P P + E+L +IM + C P RPT + + +L
Sbjct: 218 NPEVIRALERGYRMPRPE-NCPEELYNIM---MRCWKNRPEERPTFEYIQSVL 266
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 127/308 (41%), Gaps = 53/308 (17%)
Query: 490 LDFDGKIMYEEIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGD-KIAVKKFNSPFPNDQMS 548
L F G Y++ D K+ +G G++ VY +AVK D M
Sbjct: 10 LYFQGSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTM- 64
Query: 549 DQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDW 608
+ +EFL E + +I+H N+V+ G C+ +++ E++ G+L L
Sbjct: 65 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN------- 117
Query: 609 RKRMNVI------TGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLL 662
R+ +N + T ++ A+ Y+ F +HRD+++ N L+ + +V+DFG ++L+
Sbjct: 118 RQEVNAVVLLYMATQISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLM 174
Query: 663 KPNSSNWTELVGTFGYVAPAHGNIGLHLA---ELAYTMKITEKCDVYSFGVLALEVIK-- 717
++ Y A A + LAY K + K DV++FGVL E+
Sbjct: 175 TGDT-----------YTAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYG 222
Query: 718 -GKHPGDXXXXXXXXXXXINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSR 776
+PG D+R+ P EK+ +M C P+ R
Sbjct: 223 MSPYPGIDLSQVYELLEK---------DYRMERPE-GCPEKVYELMRA---CWQWNPSDR 269
Query: 777 PTMQTVCQ 784
P+ + Q
Sbjct: 270 PSFAEIHQ 277
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 126/286 (44%), Gaps = 41/286 (14%)
Query: 500 EIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKA 559
EI R + + K +G+G V+ ++A+K MS + FL E +
Sbjct: 3 EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKP----GTMSPEA-FLQEAQV 55
Query: 560 LTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVA 619
+ K+RH +V+ Y S ++V EY+++GSL L + + +++ +A
Sbjct: 56 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIA 113
Query: 620 DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYV 679
++Y+ + VHRD+ + N+L+ +V+DFG A+L++ N E G
Sbjct: 114 SGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDN-----EYTARQGAK 165
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV-IKGK--HPGDXXXXXXXXXXXIN 736
P I E A + T K DV+SFG+L E+ KG+ +PG +N
Sbjct: 166 FP----IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG-----------MVN 210
Query: 737 IEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQ 780
E ++ +R+P P + E L +M C P RPT +
Sbjct: 211 REVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRKDPEERPTFE 252
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 108/240 (45%), Gaps = 39/240 (16%)
Query: 504 RTKDFDAKYCIGKGEHRSVYRAKL----PSGDK--IAVKKFNSPFPNDQMSDQKEFLNEI 557
+ +D K +G+G V+ A+ P+ DK +AVK P ++ +K+F E
Sbjct: 13 KRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP----TLAARKDFQREA 68
Query: 558 KALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSL----------ATVLSN---NFASE 604
+ LT ++H +IVKFYG C +V+EY+ G L A +L + A
Sbjct: 69 ELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKG 128
Query: 605 DFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKP 664
+ + +++ + +A + Y+ F VHRD+++ N L+ ++ DFG ++
Sbjct: 129 ELGLSQMLHIASQIASGMVYLASQHF---VHRDLATRNCLVGANLLVKIGDFGMSR---- 181
Query: 665 NSSNWTELVGTFGYVAPAHGNIGLHLAELAYTM--KITEKCDVYSFGVLALEVIK-GKHP 721
++ T Y H + + M K T + DV+SFGV+ E+ GK P
Sbjct: 182 ------DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 123/280 (43%), Gaps = 33/280 (11%)
Query: 514 IGKGEHRSVYRA--KLPSGDKI--AVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
IG GE V KLP +I A+K S + Q +++FL+E + + H N++
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQ---RRDFLSEASIMGQFDHPNVI 71
Query: 570 KFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDC 629
G + ++ E++ GSL + L N F + + ++ G+A + Y+
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQN--DGQFTVIQLVGMLRGIAAGMKYLADMN 129
Query: 630 FPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLH 689
+ VHR +++ N+L++ +VSDFG ++ L+ ++S+ T Y + G I +
Sbjct: 130 Y---VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPT-------YTSALGGKIPIR 179
Query: 690 LA--ELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXIN-IEFNAMLDHR 746
E K T DV+S+G++ EV+ G+ IN IE D+R
Sbjct: 180 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSY---GERPYWDMTNQDVINAIE----QDYR 232
Query: 747 LPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
LP P +D L +M L C N RP + L
Sbjct: 233 LP-PPMDCPSALHQLM---LDCWQKDRNHRPKFGQIVNTL 268
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 125/286 (43%), Gaps = 41/286 (14%)
Query: 500 EIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKA 559
EI R + + K +G+G V+ ++A+K MS + FL E +
Sbjct: 14 EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKP----GTMSPEA-FLQEAQV 66
Query: 560 LTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVA 619
+ K+RH +V+ Y S ++V EY+++GSL L + +++ +A
Sbjct: 67 MKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIA 124
Query: 620 DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYV 679
++Y+ + VHRD+ + N+L+ +V+DFG A+L++ N E G
Sbjct: 125 SGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDN-----EXTARQGAK 176
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV-IKGK--HPGDXXXXXXXXXXXIN 736
P I E A + T K DV+SFG+L E+ KG+ +PG +N
Sbjct: 177 FP----IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG-----------MVN 221
Query: 737 IEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQ 780
E ++ +R+P P + E L +M C P RPT +
Sbjct: 222 REVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRKDPEERPTFE 263
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 125/286 (43%), Gaps = 41/286 (14%)
Query: 500 EIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKA 559
EI R + + K +G+G V+ ++A+K MS + FL E +
Sbjct: 14 EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKP----GTMSPEA-FLQEAQV 66
Query: 560 LTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVA 619
+ K+RH +V+ Y S ++V EY+++GSL L + +++ +A
Sbjct: 67 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIA 124
Query: 620 DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYV 679
++Y+ + VHRD+ + N+L+ +V+DFG A+L++ N E G
Sbjct: 125 SGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDN-----EYTARQGAK 176
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV-IKGK--HPGDXXXXXXXXXXXIN 736
P I E A + T K DV+SFG+L E+ KG+ +PG +N
Sbjct: 177 FP----IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG-----------MVN 221
Query: 737 IEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQ 780
E ++ +R+P P + E L +M C P RPT +
Sbjct: 222 REVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRKDPEERPTFE 263
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 135/315 (42%), Gaps = 50/315 (15%)
Query: 477 SSKNDTRGIFHSVLDFDGKIMYEEIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVK 536
+SK T+G+ EI R + + K +G+G V+ ++A+K
Sbjct: 249 TSKPQTQGLAKDAW---------EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIK 297
Query: 537 KFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATV 596
MS + FL E + + K+RH +V+ Y S ++V EY+++GSL
Sbjct: 298 TLKP----GTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 351
Query: 597 LSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDF 656
L + + +++ +A ++Y+ + VHRD+ + N+L+ +V+DF
Sbjct: 352 LKGE-TGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDLRAANILVGENLVCKVADF 407
Query: 657 GTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV- 715
G A+L++ N E G P I E A + T K DV+SFG+L E+
Sbjct: 408 GLARLIEDN-----EYTARQGAKFP----IKWTAPEAALYGRFTIKSDVWSFGILLTELT 458
Query: 716 IKGK--HPGDXXXXXXXXXXXINIEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDG 771
KG+ +PG +N E ++ +R+P P + E L +M C
Sbjct: 459 TKGRVPYPG-----------MVNREVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRK 503
Query: 772 CPNSRPTMQTVCQLL 786
P RPT + + L
Sbjct: 504 EPEERPTFEYLQAFL 518
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 125/286 (43%), Gaps = 41/286 (14%)
Query: 500 EIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKA 559
EI R + + K +G+G V+ ++A+K MS + FL E +
Sbjct: 14 EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKP----GTMSPEA-FLQEAQV 66
Query: 560 LTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVA 619
+ K+RH +V+ Y S ++V EY+++GSL L + +++ +A
Sbjct: 67 MKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIA 124
Query: 620 DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYV 679
++Y+ + VHRD+ + N+L+ +V+DFG A+L++ N E G
Sbjct: 125 SGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDN-----EYTARQGAK 176
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV-IKGK--HPGDXXXXXXXXXXXIN 736
P I E A + T K DV+SFG+L E+ KG+ +PG +N
Sbjct: 177 FP----IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG-----------MVN 221
Query: 737 IEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQ 780
E ++ +R+P P + E L +M C P RPT +
Sbjct: 222 REVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRKDPEERPTFE 263
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 126/286 (44%), Gaps = 41/286 (14%)
Query: 500 EIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKA 559
EI R + + K +G+G V+ ++A+K MS + FL E +
Sbjct: 180 EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKP----GTMSPEA-FLQEAQV 232
Query: 560 LTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVA 619
+ K+RH +V+ Y S ++V EY+++GSL L + + +++ +A
Sbjct: 233 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIA 290
Query: 620 DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYV 679
++Y+ + VHRD+ + N+L+ +V+DFG A+L++ N E G
Sbjct: 291 SGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDN-----EYTARQGAK 342
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV-IKGK--HPGDXXXXXXXXXXXIN 736
P I E A + T K DV+SFG+L E+ KG+ +PG +N
Sbjct: 343 FP----IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG-----------MVN 387
Query: 737 IEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQ 780
E ++ +R+P P + E L +M C P RPT +
Sbjct: 388 REVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRKEPEERPTFE 429
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 94/194 (48%), Gaps = 23/194 (11%)
Query: 529 SGDKIAVKKFNSPFPNDQMSDQKEFL-NEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEY 587
SG +AVKK + + ++E L NE+ + +H N+V+ Y +VV E+
Sbjct: 98 SGKLVAVKKMDL-----RKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 152
Query: 588 INRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDL 647
+ G+L ++++ +E+ + V V ALS +H ++HRDI S+++LL
Sbjct: 153 LEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTH 205
Query: 648 EYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYS 707
+ ++SDFG + LVGT ++AP EL + + D++S
Sbjct: 206 DGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP----------ELISRLPYGPEVDIWS 255
Query: 708 FGVLALEVIKGKHP 721
G++ +E++ G+ P
Sbjct: 256 LGIMVIEMVDGEPP 269
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 126/286 (44%), Gaps = 41/286 (14%)
Query: 500 EIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKA 559
EI R + + K +G+G V+ ++A+K MS + FL E +
Sbjct: 7 EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKP----GTMSPEA-FLQEAQV 59
Query: 560 LTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVA 619
+ K+RH +V+ Y S ++V EY+++GSL L + + +++ +A
Sbjct: 60 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIA 117
Query: 620 DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYV 679
++Y+ + VHRD+ + N+L+ +V+DFG A+L++ N E G
Sbjct: 118 SGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDN-----EYTARQGAK 169
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV-IKGK--HPGDXXXXXXXXXXXIN 736
P I E A + T K DV+SFG+L E+ KG+ +PG +N
Sbjct: 170 FP----IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG-----------MVN 214
Query: 737 IEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQ 780
E ++ +R+P P + E L +M C P RPT +
Sbjct: 215 REVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRKEPEERPTFE 256
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 125/286 (43%), Gaps = 41/286 (14%)
Query: 500 EIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKA 559
EI R + + K +G+G V+ ++A+K MS + FL E +
Sbjct: 5 EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKP----GTMSPEA-FLQEAQV 57
Query: 560 LTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVA 619
+ K+RH +V+ Y S ++V EY+++GSL L + +++ +A
Sbjct: 58 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIA 115
Query: 620 DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYV 679
++Y+ + VHRD+ + N+L+ +V+DFG A+L++ N E G
Sbjct: 116 SGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDN-----EYTARQGAK 167
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV-IKGK--HPGDXXXXXXXXXXXIN 736
P I E A + T K DV+SFG+L E+ KG+ +PG +N
Sbjct: 168 FP----IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG-----------MVN 212
Query: 737 IEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQ 780
E ++ +R+P P + E L +M C P RPT +
Sbjct: 213 REVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRKDPEERPTFE 254
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 125/286 (43%), Gaps = 41/286 (14%)
Query: 500 EIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKA 559
EI R + + K +G+G V+ ++A+K MS + FL E +
Sbjct: 14 EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKP----GTMSPEA-FLQEAQV 66
Query: 560 LTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVA 619
+ K+RH +V+ Y S ++V EY+++GSL L + +++ +A
Sbjct: 67 MKKLRHEKLVQLYAVVSE-EPIYIVCEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIA 124
Query: 620 DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYV 679
++Y+ + VHRD+ + N+L+ +V+DFG A+L++ N E G
Sbjct: 125 SGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDN-----EYTARQGAK 176
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV-IKGK--HPGDXXXXXXXXXXXIN 736
P I E A + T K DV+SFG+L E+ KG+ +PG +N
Sbjct: 177 FP----IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG-----------MVN 221
Query: 737 IEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQ 780
E ++ +R+P P + E L +M C P RPT +
Sbjct: 222 REVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRKDPEERPTFE 263
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 126/286 (44%), Gaps = 41/286 (14%)
Query: 500 EIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKA 559
EI R + + K +G+G V+ ++A+K MS + FL E +
Sbjct: 180 EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKP----GTMSPEA-FLQEAQV 232
Query: 560 LTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVA 619
+ K+RH +V+ Y S ++V EY+++GSL L + + +++ +A
Sbjct: 233 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIA 290
Query: 620 DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYV 679
++Y+ + VHRD+ + N+L+ +V+DFG A+L++ N E G
Sbjct: 291 SGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDN-----EYTARQGAK 342
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV-IKGK--HPGDXXXXXXXXXXXIN 736
P I E A + T K DV+SFG+L E+ KG+ +PG +N
Sbjct: 343 FP----IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG-----------MVN 387
Query: 737 IEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQ 780
E ++ +R+P P + E L +M C P RPT +
Sbjct: 388 REVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRKEPEERPTFE 429
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 131/293 (44%), Gaps = 43/293 (14%)
Query: 500 EIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKA 559
EI R + + K +G G+ V+ A K+AVK MS + FL E
Sbjct: 184 EIPRESLKLEKK--LGAGQFGEVWMATYNKHTKVAVKTMKP----GSMSVEA-FLAEANV 236
Query: 560 LTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVA 619
+ ++H +VK + + +++ E++ +GSL L ++ S+ K ++ +A
Sbjct: 237 MKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIA 294
Query: 620 DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG-TFGY 678
+ ++++ + +HRD+ + N+L+ +++DFG A++++ N E +
Sbjct: 295 EGMAFIEQRNY---IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKW 351
Query: 679 VAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI---KGKHPGDXXXXXXXXXXXI 735
AP N G T K DV+SFG+L +E++ + +PG
Sbjct: 352 TAPEAINFG----------SFTIKSDVWSFGILLMEIVTYGRIPYPG-----------MS 390
Query: 736 NIEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
N E L+ +R+P P + E+L +IM + C P RPT + + +L
Sbjct: 391 NPEVIRALERGYRMPRPE-NCPEELYNIM---MRCWKNRPEERPTFEYIQSVL 439
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 94/194 (48%), Gaps = 23/194 (11%)
Query: 529 SGDKIAVKKFNSPFPNDQMSDQKEFL-NEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEY 587
SG +AVKK + + ++E L NE+ + +H N+V+ Y +VV E+
Sbjct: 175 SGKLVAVKKMDL-----RKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229
Query: 588 INRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDL 647
+ G+L ++++ +E+ + V V ALS +H ++HRDI S+++LL
Sbjct: 230 LEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTH 282
Query: 648 EYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYS 707
+ ++SDFG + LVGT ++AP EL + + D++S
Sbjct: 283 DGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP----------ELISRLPYGPEVDIWS 332
Query: 708 FGVLALEVIKGKHP 721
G++ +E++ G+ P
Sbjct: 333 LGIMVIEMVDGEPP 346
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 94/194 (48%), Gaps = 23/194 (11%)
Query: 529 SGDKIAVKKFNSPFPNDQMSDQKEFL-NEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEY 587
SG +AVKK + + ++E L NE+ + +H N+V+ Y +VV E+
Sbjct: 55 SGKLVAVKKMDL-----RKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 109
Query: 588 INRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDL 647
+ G+L ++++ +E+ + V V ALS +H ++HRDI S+++LL
Sbjct: 110 LEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTH 162
Query: 648 EYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYS 707
+ ++SDFG + LVGT ++AP EL + + D++S
Sbjct: 163 DGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP----------ELISRLPYGPEVDIWS 212
Query: 708 FGVLALEVIKGKHP 721
G++ +E++ G+ P
Sbjct: 213 LGIMVIEMVDGEPP 226
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 94/194 (48%), Gaps = 23/194 (11%)
Query: 529 SGDKIAVKKFNSPFPNDQMSDQKEFL-NEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEY 587
SG +AVKK + + ++E L NE+ + +H N+V+ Y +VV E+
Sbjct: 53 SGKLVAVKKMDL-----RKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 107
Query: 588 INRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDL 647
+ G+L ++++ +E+ + V V ALS +H ++HRDI S+++LL
Sbjct: 108 LEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTH 160
Query: 648 EYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYS 707
+ ++SDFG + LVGT ++AP EL + + D++S
Sbjct: 161 DGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP----------ELISRLPYGPEVDIWS 210
Query: 708 FGVLALEVIKGKHP 721
G++ +E++ G+ P
Sbjct: 211 LGIMVIEMVDGEPP 224
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 126/286 (44%), Gaps = 41/286 (14%)
Query: 500 EIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKA 559
EI R + + K +G+G V+ ++A+K MS + FL E +
Sbjct: 180 EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKP----GTMSPEA-FLQEAQV 232
Query: 560 LTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVA 619
+ K+RH +V+ Y S ++V EY+++GSL L + + +++ +A
Sbjct: 233 MKKLRHEKLVQLYAVVSE-EPIYIVGEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIA 290
Query: 620 DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYV 679
++Y+ + VHRD+ + N+L+ +V+DFG A+L++ N E G
Sbjct: 291 SGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDN-----EYTARQGAK 342
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV-IKGK--HPGDXXXXXXXXXXXIN 736
P I E A + T K DV+SFG+L E+ KG+ +PG +N
Sbjct: 343 FP----IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG-----------MVN 387
Query: 737 IEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQ 780
E ++ +R+P P + E L +M C P RPT +
Sbjct: 388 REVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRKEPEERPTFE 429
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 94/194 (48%), Gaps = 23/194 (11%)
Query: 529 SGDKIAVKKFNSPFPNDQMSDQKEFL-NEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEY 587
SG +AVKK + + ++E L NE+ + +H N+V+ Y +VV E+
Sbjct: 48 SGKLVAVKKMDL-----RKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 102
Query: 588 INRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDL 647
+ G+L ++++ +E+ + V V ALS +H ++HRDI S+++LL
Sbjct: 103 LEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTH 155
Query: 648 EYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYS 707
+ ++SDFG + LVGT ++AP EL + + D++S
Sbjct: 156 DGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP----------ELISRLPYGPEVDIWS 205
Query: 708 FGVLALEVIKGKHP 721
G++ +E++ G+ P
Sbjct: 206 LGIMVIEMVDGEPP 219
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 99/212 (46%), Gaps = 26/212 (12%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
IG G+ V+ + DK+A+K MS++ +F+ E + + K+ H +V+ YG
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIR----EGAMSEE-DFIEEAEVMMKLSHPKLVQLYG 70
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNN---FASEDFDWRKRMNVITGVADALSYMHHDCF 630
C +V E++ G L+ L FA+E + + V + ++Y+ C
Sbjct: 71 VCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC- 124
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
++HRD+++ N L+ +VSDFG + + + +T GT V A
Sbjct: 125 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWAS------- 173
Query: 691 AELAYTMKITEKCDVYSFGVLALEVI-KGKHP 721
E+ + + K DV+SFGVL EV +GK P
Sbjct: 174 PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 205
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 94/194 (48%), Gaps = 23/194 (11%)
Query: 529 SGDKIAVKKFNSPFPNDQMSDQKEFL-NEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEY 587
SG +AVKK + + ++E L NE+ + +H N+V+ Y +VV E+
Sbjct: 44 SGKLVAVKKMDL-----RKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 98
Query: 588 INRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDL 647
+ G+L ++++ +E+ + V V ALS +H ++HRDI S+++LL
Sbjct: 99 LEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTH 151
Query: 648 EYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYS 707
+ ++SDFG + LVGT ++AP EL + + D++S
Sbjct: 152 DGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP----------ELISRLPYGPEVDIWS 201
Query: 708 FGVLALEVIKGKHP 721
G++ +E++ G+ P
Sbjct: 202 LGIMVIEMVDGEPP 215
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 20/209 (9%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
+G G+ V K +A+K MS+ EF+ E K + + H +V+ YG
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK----EGSMSED-EFIEEAKVMMNLSHEKLVQLYG 86
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
C+ R F++ EY+ G L L F ++ + + V +A+ Y+ F
Sbjct: 87 VCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESKQF--- 141
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAEL 693
+HRD+++ N L++ + +VSDFG ++ + + E + G P + E+
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-----EYTSSVGSKFPVRWSP----PEV 192
Query: 694 AYTMKITEKCDVYSFGVLALEVIK-GKHP 721
K + K D+++FGVL E+ GK P
Sbjct: 193 LMYSKFSSKSDIWAFGVLMWEIYSLGKMP 221
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 134/309 (43%), Gaps = 50/309 (16%)
Query: 477 SSKNDTRGIFHSVLDFDGKIMYEEIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVK 536
+SK T+G+ EI R + + K +G+G V+ ++A+K
Sbjct: 167 TSKPQTQGLAKDAW---------EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIK 215
Query: 537 KFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATV 596
P + MS + FL E + + K+RH +V+ Y S ++V EY+++GSL
Sbjct: 216 TLK---PGN-MSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF 269
Query: 597 LSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDF 656
L + + +++ +A ++Y+ + VHRD+ + N+L+ +V+DF
Sbjct: 270 LKGEMG-KYLRLPQLVDMAAQIASGMAYVERMNY---VHRDLRAANILVGENLVCKVADF 325
Query: 657 GTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV- 715
G +L++ N E G P I E A + T K DV+SFG+L E+
Sbjct: 326 GLGRLIEDN-----EYTARQGAKFP----IKWTAPEAALYGRFTIKSDVWSFGILLTELT 376
Query: 716 IKGK--HPGDXXXXXXXXXXXINIEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDG 771
KG+ +PG +N E ++ +R+P P + E L +M C
Sbjct: 377 TKGRVPYPG-----------MVNREVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRK 421
Query: 772 CPNSRPTMQ 780
P RPT +
Sbjct: 422 DPEERPTFE 430
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 20/192 (10%)
Query: 533 IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGS 592
+A+K + + Q +++FL+E + + H NI++ G + R + +V EY+ GS
Sbjct: 80 VAIKALKAGYTERQ---RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGS 136
Query: 593 LATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEAR 652
L T L + F + + ++ GV + Y+ + VHRD+++ NVL+D +
Sbjct: 137 LDTFLRTH--DGQFTIMQLVGMLRGVGAGMRYLSDLGY---VHRDLAARNVLVDSNLVCK 191
Query: 653 VSDFGTAKLLK--PNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGV 710
VSDFG +++L+ P+++ T T G + I E + DV+SFGV
Sbjct: 192 VSDFGLSRVLEDDPDAAXTT----TGGKIP-----IRWTAPEAIAFRTFSSASDVWSFGV 242
Query: 711 LALEVIK-GKHP 721
+ EV+ G+ P
Sbjct: 243 VMWEVLAYGERP 254
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 20/209 (9%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
+G G+ V K +A+K MS+ EF+ E K + + H +V+ YG
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIK----EGSMSED-EFIEEAKVMMNLSHEKLVQLYG 77
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
C+ R F++ EY+ G L L F ++ + + V +A+ Y+ F
Sbjct: 78 VCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESKQF--- 132
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAEL 693
+HRD+++ N L++ + +VSDFG ++ + + E + G P + E+
Sbjct: 133 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-----EYTSSVGSKFPVRWSP----PEV 183
Query: 694 AYTMKITEKCDVYSFGVLALEVIK-GKHP 721
K + K D+++FGVL E+ GK P
Sbjct: 184 LMYSKFSSKSDIWAFGVLMWEIYSLGKMP 212
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 20/209 (9%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
+G G+ V K +A+K MS+ EF+ E K + + H +V+ YG
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK----EGSMSED-EFIEEAKVMMNLSHEKLVQLYG 71
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
C+ R F++ EY+ G L L F ++ + + V +A+ Y+ F
Sbjct: 72 VCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESKQF--- 126
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAEL 693
+HRD+++ N L++ + +VSDFG ++ + + E + G P + E+
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-----EYTSSVGSKFPVRWSP----PEV 177
Query: 694 AYTMKITEKCDVYSFGVLALEVIK-GKHP 721
K + K D+++FGVL E+ GK P
Sbjct: 178 LMYSKFSSKSDIWAFGVLMWEIYSLGKMP 206
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 124/286 (43%), Gaps = 41/286 (14%)
Query: 500 EIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKA 559
EI R + + K +G+G V+ ++A+K MS + FL E +
Sbjct: 14 EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKP----GTMSPEA-FLQEAQV 66
Query: 560 LTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVA 619
+ K+RH +V+ Y S ++V EY+++G L L + +++ +A
Sbjct: 67 MKKLRHEKLVQLYAVVSE-EPIYIVMEYMSKGCLLDFLKGEMGKY-LRLPQLVDMAAQIA 124
Query: 620 DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYV 679
++Y+ + VHRD+ + N+L+ +V+DFG A+L++ N E G
Sbjct: 125 SGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDN-----EYTARQGAK 176
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV-IKGK--HPGDXXXXXXXXXXXIN 736
P I E A + T K DV+SFG+L E+ KG+ +PG +N
Sbjct: 177 FP----IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG-----------MVN 221
Query: 737 IEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQ 780
E ++ +R+P P + E L +M C P RPT +
Sbjct: 222 REVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRKDPEERPTFE 263
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 20/209 (9%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
+G G+ V K +A+K MS+ EF+ E K + + H +V+ YG
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIK----EGSMSED-EFIEEAKVMMNLSHEKLVQLYG 70
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
C+ R F++ EY+ G L L F ++ + + V +A+ Y+ F
Sbjct: 71 VCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESKQF--- 125
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAEL 693
+HRD+++ N L++ + +VSDFG ++ + + E + G P + E+
Sbjct: 126 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-----EYTSSVGSKFPVRWSP----PEV 176
Query: 694 AYTMKITEKCDVYSFGVLALEVIK-GKHP 721
K + K D+++FGVL E+ GK P
Sbjct: 177 LMYSKFSSKSDIWAFGVLMWEIYSLGKMP 205
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 125/286 (43%), Gaps = 41/286 (14%)
Query: 500 EIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKA 559
EI R + + K +G+G V+ ++A+K MS + FL E +
Sbjct: 4 EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKP----GTMSPEA-FLQEAQV 56
Query: 560 LTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVA 619
+ K+RH +V+ Y S +V EY+++GSL L + + +++ +A
Sbjct: 57 MKKLRHEKLVQLYAVVSE-EPIXIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIA 114
Query: 620 DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYV 679
++Y+ + VHRD+ + N+L+ +V+DFG A+L++ N E G
Sbjct: 115 SGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDN-----EXTARQGAK 166
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV-IKGK--HPGDXXXXXXXXXXXIN 736
P I E A + T K DV+SFG+L E+ KG+ +PG +N
Sbjct: 167 FP----IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG-----------MVN 211
Query: 737 IEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQ 780
E ++ +R+P P + E L +M C P RPT +
Sbjct: 212 REVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRKEPEERPTFE 253
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 20/209 (9%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
+G G+ V K +A+K MS+ EF+ E K + + H +V+ YG
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIK----EGSMSED-EFIEEAKVMMNLSHEKLVQLYG 66
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
C+ R F++ EY+ G L L F ++ + + V +A+ Y+ F
Sbjct: 67 VCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESKQF--- 121
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAEL 693
+HRD+++ N L++ + +VSDFG ++ + + E + G P + E+
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-----EYTSSVGSKFPVRWSP----PEV 172
Query: 694 AYTMKITEKCDVYSFGVLALEVIK-GKHP 721
K + K D+++FGVL E+ GK P
Sbjct: 173 LMYSKFSSKSDIWAFGVLMWEIYSLGKMP 201
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 20/209 (9%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
+G G+ V K +A+K MS+ EF+ E K + + H +V+ YG
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK----EGSMSED-EFIEEAKVMMNLSHEKLVQLYG 86
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
C+ R F++ EY+ G L L F ++ + + V +A+ Y+ F
Sbjct: 87 VCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESKQF--- 141
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAEL 693
+HRD+++ N L++ + +VSDFG ++ + + E + G P + E+
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-----EETSSVGSKFPVRWSP----PEV 192
Query: 694 AYTMKITEKCDVYSFGVLALEVIK-GKHP 721
K + K D+++FGVL E+ GK P
Sbjct: 193 LMYSKFSSKSDIWAFGVLMWEIYSLGKMP 221
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 20/192 (10%)
Query: 533 IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGS 592
+A+K + + Q +++FL+E + + H NI++ G + R + +V EY+ GS
Sbjct: 80 VAIKALKAGYTERQ---RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGS 136
Query: 593 LATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEAR 652
L T L + F + + ++ GV + Y+ + VHRD+++ NVL+D +
Sbjct: 137 LDTFLRTH--DGQFTIMQLVGMLRGVGAGMRYLSDLGY---VHRDLAARNVLVDSNLVCK 191
Query: 653 VSDFGTAKLLK--PNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGV 710
VSDFG +++L+ P+++ T T G + I E + DV+SFGV
Sbjct: 192 VSDFGLSRVLEDDPDAAYTT----TGGKIP-----IRWTAPEAIAFRTFSSASDVWSFGV 242
Query: 711 LALEVIK-GKHP 721
+ EV+ G+ P
Sbjct: 243 VMWEVLAYGERP 254
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 124/286 (43%), Gaps = 41/286 (14%)
Query: 500 EIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKA 559
EI R + + K +G+G V+ ++A+K MS + FL E +
Sbjct: 14 EIPRESLRLEVK--LGQGCFGEVWMGTWNGTTRVAIKTLKP----GTMSPEA-FLQEAQV 66
Query: 560 LTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVA 619
+ K+RH +V+ Y S ++V EY+++G L L + +++ +A
Sbjct: 67 MKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGCLLDFLKGEMGKY-LRLPQLVDMAAQIA 124
Query: 620 DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYV 679
++Y+ + VHRD+ + N+L+ +V+DFG A+L++ N E G
Sbjct: 125 SGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDN-----EYTARQGAK 176
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV-IKGK--HPGDXXXXXXXXXXXIN 736
P I E A + T K DV+SFG+L E+ KG+ +PG +N
Sbjct: 177 FP----IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG-----------MVN 221
Query: 737 IEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQ 780
E ++ +R+P P + E L +M C P RPT +
Sbjct: 222 REVLDQVERGYRMPCPP-ECPESLHDLM---CQCWRKDPEERPTFE 263
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 110/230 (47%), Gaps = 31/230 (13%)
Query: 505 TKDFDA-----KYCIGKGEHRSVY--RAKLPSGDKI--AVKKFNSPFPNDQMSDQKEFLN 555
K+ DA + IG GE V R K+P +I A+K + + + Q +++FL+
Sbjct: 8 AKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ---RRDFLS 64
Query: 556 EIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVI 615
E + + H NI+ G + + ++ EY+ GSL L N F + + ++
Sbjct: 65 EASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR--FTVIQLVGML 122
Query: 616 TGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPN-SSNWTELVG 674
G+ + Y+ + VHRD+++ N+L++ +VSDFG +++L+ + + +T G
Sbjct: 123 RGIGSGMKYLSDMSY---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGG 179
Query: 675 T--FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHP 721
+ AP +AY K T DV+S+G++ EV+ G+ P
Sbjct: 180 KIPIRWTAPEA---------IAYR-KFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 110/230 (47%), Gaps = 31/230 (13%)
Query: 505 TKDFDA-----KYCIGKGEHRSVY--RAKLPSGDKI--AVKKFNSPFPNDQMSDQKEFLN 555
K+ DA + IG GE V R K+P +I A+K + + + Q +++FL+
Sbjct: 2 AKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ---RRDFLS 58
Query: 556 EIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVI 615
E + + H NI+ G + + ++ EY+ GSL L N F + + ++
Sbjct: 59 EASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR--FTVIQLVGML 116
Query: 616 TGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPN-SSNWTELVG 674
G+ + Y+ + VHRD+++ N+L++ +VSDFG +++L+ + + +T G
Sbjct: 117 RGIGSGMKYLSDMSY---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGG 173
Query: 675 T--FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHP 721
+ AP +AY K T DV+S+G++ EV+ G+ P
Sbjct: 174 KIPIRWTAP---------EAIAYR-KFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 107/227 (47%), Gaps = 23/227 (10%)
Query: 501 IIRRTKDFDAKYCIGKGEHRSVYRAK-LPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKA 559
I + +DF +GKG VYRA+ + +G ++A+K + Q+ NE+K
Sbjct: 6 IGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQR-VQNEVKI 64
Query: 560 LTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFA--SEDFDWRKRMNVITG 617
+++H +I++ Y + + ++V E + G + L N SE+ +ITG
Sbjct: 65 HCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITG 124
Query: 618 VADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK-PNSSNWTELVGTF 676
+ Y+H I+HRD++ +N+LL +++DFG A LK P+ ++T L GT
Sbjct: 125 ML----YLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-LCGTP 176
Query: 677 GYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGD 723
Y++P H E DV+S G + ++ G+ P D
Sbjct: 177 NYISPEIATRSAHGLE----------SDVWSLGCMFYTLLIGRPPFD 213
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 124/300 (41%), Gaps = 53/300 (17%)
Query: 498 YEEIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGD-KIAVKKFNSPFPNDQMSDQKEFLNE 556
Y++ D K+ +G G++ VY +AVK D M + +EFL E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTM-EVEEFLKE 64
Query: 557 IKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVI- 615
+ +I+H N+V+ G C+ +++ E++ G+L L R+ +N +
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN-------RQEVNAVV 117
Query: 616 -----TGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWT 670
T ++ A+ Y+ F +HRD+++ N L+ + +V+DFG ++L+ ++
Sbjct: 118 LLYMATQISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT---- 170
Query: 671 ELVGTFGYVAPAHGNIGLHLA---ELAYTMKITEKCDVYSFGVLALEVIK---GKHPGDX 724
Y A A + LAY K + K DV++FGVL E+ +PG
Sbjct: 171 -------YTAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID 222
Query: 725 XXXXXXXXXXINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
D+R+ P EK+ +M C P+ RP+ + Q
Sbjct: 223 LSQVYELLEK---------DYRMERPE-GCPEKVYELMRA---CWQWNPSDRPSFAEIHQ 269
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 123/275 (44%), Gaps = 55/275 (20%)
Query: 532 KIAVKKFNSPFPNDQMSDQKE-FLNEIKALTKI-RHRNIVKFYGFCSHVRHSFVVYEYIN 589
K+AVK S +D+KE ++E+K ++ + +H NIV G C+H V+ EY
Sbjct: 70 KVAVKMLKS----TAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 125
Query: 590 RGSLATVLSNNFASEDFD--------WRKRMNVITGVADALSYM-HHDCFPPIVHRDISS 640
G L L A D D R ++ + VA ++++ +C +HRD+++
Sbjct: 126 YGDLLNFLRRK-AEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAA 180
Query: 641 NNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELA----YT 696
NVLL + A++ DFG A+ + N SN+ GN L + +A +
Sbjct: 181 RNVLLTNGHVAKIGDFGLARDIM-NDSNYI-----------VKGNARLPVKWMAPESIFD 228
Query: 697 MKITEKCDVYSFGVLALEVIK---GKHPGDXXXXXXXXXXXINIEFNAMLD--HRLPHPS 751
T + DV+S+G+L E+ +PG +N +F ++ +++ P+
Sbjct: 229 CVYTVQSDVWSYGILLWEIFSLGLNPYPG----------ILVNSKFYKLVKDGYQMAQPA 278
Query: 752 LDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
+ + SIM+ C P RPT Q +C L
Sbjct: 279 F-APKNIYSIMQA---CWALEPTHRPTFQQICSFL 309
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 130/312 (41%), Gaps = 61/312 (19%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKI-AVKKFNSPFPNDQMSDQKEFLNEIKAL 560
+R DF+ +G+G V +A+ + A+KK +++S L+E+ L
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT--EEKLS---TILSEVMLL 56
Query: 561 TKIRHRNIVKFYGFCSHVRH-------------SFVVYEYINRGSLATVLSNNFASEDFD 607
+ H+ +V++Y R+ F+ EY G+L ++ + ++ D
Sbjct: 57 ASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRD 116
Query: 608 --WRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAK----- 660
WR + + +ALSY+H I+HRD+ N+ +D ++ DFG AK
Sbjct: 117 EYWR----LFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 661 --LLK------PNSS-NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVL 711
+LK P SS N T +GT YVA L T EK D+YS G++
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAMYVAT---------EVLDGTGHYNEKIDMYSLGII 220
Query: 712 ALEVIKGKHPGDXXXXXXXXXXXINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDG 771
E+I G ++IEF D + V++K+I L +D
Sbjct: 221 FFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDN----KMKVEKKIIR------LLIDH 270
Query: 772 CPNSRPTMQTVC 783
PN RP +T+
Sbjct: 271 DPNKRPGARTLL 282
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 124/300 (41%), Gaps = 53/300 (17%)
Query: 498 YEEIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGD-KIAVKKFNSPFPNDQMSDQKEFLNE 556
Y++ D K+ +G G++ VY +AVK D M + +EFL E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTM-EVEEFLKE 64
Query: 557 IKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVI- 615
+ +I+H N+V+ G C+ +++ E++ G+L L R+ +N +
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-------RQEVNAVV 117
Query: 616 -----TGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWT 670
T ++ A+ Y+ F +HRD+++ N L+ + +V+DFG ++L+ ++
Sbjct: 118 LLYMATQISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT---- 170
Query: 671 ELVGTFGYVAPAHGNIGLHLA---ELAYTMKITEKCDVYSFGVLALEVIK---GKHPGDX 724
Y A A + LAY K + K DV++FGVL E+ +PG
Sbjct: 171 -------YTAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID 222
Query: 725 XXXXXXXXXXINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
D+R+ P EK+ +M C P+ RP+ + Q
Sbjct: 223 LSQVYELLEK---------DYRMERPE-GCPEKVYELMRA---CWQWNPSDRPSFAEIHQ 269
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 20/209 (9%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
+G G+ V K +A+K MS+ EF+ E K + + H +V+ YG
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK----EGSMSED-EFIEEAKVMMNLSHEKLVQLYG 71
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
C+ R F++ EY+ G L L F ++ + + V +A+ Y+ F
Sbjct: 72 VCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESKQF--- 126
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAEL 693
+HRD+++ N L++ + +VSDFG ++ + + E + G P + E+
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-----EYTSSRGSKFPVRWSP----PEV 177
Query: 694 AYTMKITEKCDVYSFGVLALEVIK-GKHP 721
K + K D+++FGVL E+ GK P
Sbjct: 178 LMYSKFSSKSDIWAFGVLMWEIYSLGKMP 206
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 124/300 (41%), Gaps = 53/300 (17%)
Query: 498 YEEIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGD-KIAVKKFNSPFPNDQMSDQKEFLNE 556
Y++ D K+ +G G++ VY +AVK D M + +EFL E
Sbjct: 9 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTM-EVEEFLKE 63
Query: 557 IKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVI- 615
+ +I+H N+V+ G C+ +++ E++ G+L L R+ +N +
Sbjct: 64 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-------RQEVNAVV 116
Query: 616 -----TGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWT 670
T ++ A+ Y+ F +HRD+++ N L+ + +V+DFG ++L+ ++
Sbjct: 117 LLYMATQISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT---- 169
Query: 671 ELVGTFGYVAPAHGNIGLHLA---ELAYTMKITEKCDVYSFGVLALEVIK---GKHPGDX 724
Y A A + LAY K + K DV++FGVL E+ +PG
Sbjct: 170 -------YTAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID 221
Query: 725 XXXXXXXXXXINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
D+R+ P EK+ +M C P+ RP+ + Q
Sbjct: 222 LSQVYELLEK---------DYRMERPE-GCPEKVYELMRA---CWQWNPSDRPSFAEIHQ 268
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 124/296 (41%), Gaps = 54/296 (18%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRAKLPSGD-KIAVKKFNSPFPNDQMSDQKEFLNEIKAL 560
+ RT D K+ +G G++ VY +AVK D M + +EFL E +
Sbjct: 15 MERT-DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTM-EVEEFLKEAAVM 68
Query: 561 TKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVI----- 615
+I+H N+V+ G C+ +++ E++ G+L L R+ +N +
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-------RQEVNAVVLLYM 121
Query: 616 -TGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG 674
T ++ A+ Y+ F +HRD+++ N L+ + +V+DFG ++L+ ++
Sbjct: 122 ATQISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-------- 170
Query: 675 TFGYVAPAHGNIGLHLA---ELAYTMKITEKCDVYSFGVLALEVIK---GKHPGDXXXXX 728
Y A A + LAY K + K DV++FGVL E+ +PG
Sbjct: 171 ---YTAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 226
Query: 729 XXXXXXINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
D+R+ P EK+ +M C P+ RP+ + Q
Sbjct: 227 YELLEK---------DYRMERPE-GCPEKVYELMRA---CWQWNPSDRPSFAEIHQ 269
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 123/275 (44%), Gaps = 55/275 (20%)
Query: 532 KIAVKKFNSPFPNDQMSDQKE-FLNEIKALTKI-RHRNIVKFYGFCSHVRHSFVVYEYIN 589
K+AVK S +D+KE ++E+K ++ + +H NIV G C+H V+ EY
Sbjct: 78 KVAVKMLKST----AHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 133
Query: 590 RGSLATVLSNNFASEDFD--------WRKRMNVITGVADALSYM-HHDCFPPIVHRDISS 640
G L L A D D R ++ + VA ++++ +C +HRD+++
Sbjct: 134 YGDLLNFLRRK-AEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAA 188
Query: 641 NNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELA----YT 696
NVLL + A++ DFG A+ + N SN+ GN L + +A +
Sbjct: 189 RNVLLTNGHVAKIGDFGLARDIM-NDSNYI-----------VKGNARLPVKWMAPESIFD 236
Query: 697 MKITEKCDVYSFGVLALEVIK---GKHPGDXXXXXXXXXXXINIEFNAMLD--HRLPHPS 751
T + DV+S+G+L E+ +PG +N +F ++ +++ P+
Sbjct: 237 CVYTVQSDVWSYGILLWEIFSLGLNPYPG----------ILVNSKFYKLVKDGYQMAQPA 286
Query: 752 LDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
+ + SIM+ C P RPT Q +C L
Sbjct: 287 F-APKNIYSIMQA---CWALEPTHRPTFQQICSFL 317
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 124/300 (41%), Gaps = 53/300 (17%)
Query: 498 YEEIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGD-KIAVKKFNSPFPNDQMSDQKEFLNE 556
Y++ D K+ +G G++ VY +AVK D M + +EFL E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTM-EVEEFLKE 59
Query: 557 IKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVI- 615
+ +I+H N+V+ G C+ +++ E++ G+L L R+ +N +
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-------RQEVNAVV 112
Query: 616 -----TGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWT 670
T ++ A+ Y+ F +HRD+++ N L+ + +V+DFG ++L+ ++
Sbjct: 113 LLYMATQISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT---- 165
Query: 671 ELVGTFGYVAPAHGNIGLHLA---ELAYTMKITEKCDVYSFGVLALEVIK---GKHPGDX 724
Y A A + LAY K + K DV++FGVL E+ +PG
Sbjct: 166 -------YTAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID 217
Query: 725 XXXXXXXXXXINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
D+R+ P EK+ +M C P+ RP+ + Q
Sbjct: 218 LSQVYELLEK---------DYRMERPE-GCPEKVYELMRA---CWQWNPSDRPSFAEIHQ 264
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 124/296 (41%), Gaps = 54/296 (18%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRAKLPSGD-KIAVKKFNSPFPNDQMSDQKEFLNEIKAL 560
+ RT D K+ +G G++ VY +AVK D M + +EFL E +
Sbjct: 12 MERT-DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTM-EVEEFLKEAAVM 65
Query: 561 TKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVI----- 615
+I+H N+V+ G C+ +++ E++ G+L L R+ +N +
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-------RQEVNAVVLLYM 118
Query: 616 -TGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG 674
T ++ A+ Y+ F +HRD+++ N L+ + +V+DFG ++L+ ++
Sbjct: 119 ATQISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-------- 167
Query: 675 TFGYVAPAHGNIGLHLA---ELAYTMKITEKCDVYSFGVLALEVIK---GKHPGDXXXXX 728
Y A A + LAY K + K DV++FGVL E+ +PG
Sbjct: 168 ---YTAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 223
Query: 729 XXXXXXINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
D+R+ P EK+ +M C P+ RP+ + Q
Sbjct: 224 YELLEK---------DYRMERPE-GCPEKVYELMRA---CWQWNPSDRPSFAEIHQ 266
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 124/296 (41%), Gaps = 54/296 (18%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRAKLPSGD-KIAVKKFNSPFPNDQMSDQKEFLNEIKAL 560
+ RT D K+ +G G++ VY +AVK D M + +EFL E +
Sbjct: 10 MERT-DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTM-EVEEFLKEAAVM 63
Query: 561 TKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVI----- 615
+I+H N+V+ G C+ +++ E++ G+L L R+ +N +
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-------RQEVNAVVLLYM 116
Query: 616 -TGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG 674
T ++ A+ Y+ F +HRD+++ N L+ + +V+DFG ++L+ ++
Sbjct: 117 ATQISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-------- 165
Query: 675 TFGYVAPAHGNIGLHLA---ELAYTMKITEKCDVYSFGVLALEVIK---GKHPGDXXXXX 728
Y A A + LAY K + K DV++FGVL E+ +PG
Sbjct: 166 ---YTAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 221
Query: 729 XXXXXXINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
D+R+ P EK+ +M C P+ RP+ + Q
Sbjct: 222 YELLEK---------DYRMERPE-GCPEKVYELMRA---CWQWNPSDRPSFAEIHQ 264
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 124/288 (43%), Gaps = 38/288 (13%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRAKLPSGD-KIAVKKFNSPFPNDQMSDQKEFLNEIKAL 560
+ RT D K+ +G G++ VY +AVK D M + +EFL E +
Sbjct: 8 MERT-DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTM-EVEEFLKEAAVM 61
Query: 561 TKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVAD 620
+I+H N+V+ G C+ +++ E++ G+L L ++ + + T ++
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISS 120
Query: 621 ALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVA 680
A+ Y+ F +HRD+++ N L+ + +V+DFG ++L+ + TF A
Sbjct: 121 AMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGD---------TFTAHA 168
Query: 681 PAHGNIGLHLAE-LAYTMKITEKCDVYSFGVLALEVIK---GKHPGDXXXXXXXXXXXIN 736
A I E LAY K + K DV++FGVL E+ +PG
Sbjct: 169 GAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK-- 225
Query: 737 IEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
D+R+ P EK+ +M C P+ RP+ + Q
Sbjct: 226 -------DYRMERPE-GCPEKVYELMRA---CWQWNPSDRPSFAEIHQ 262
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 124/296 (41%), Gaps = 54/296 (18%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRAKLPSGD-KIAVKKFNSPFPNDQMSDQKEFLNEIKAL 560
+ RT D K+ +G G++ VY +AVK D M + +EFL E +
Sbjct: 12 MERT-DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTM-EVEEFLKEAAVM 65
Query: 561 TKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVI----- 615
+I+H N+V+ G C+ +++ E++ G+L L R+ +N +
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-------RQEVNAVVLLYM 118
Query: 616 -TGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG 674
T ++ A+ Y+ F +HRD+++ N L+ + +V+DFG ++L+ ++
Sbjct: 119 ATQISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-------- 167
Query: 675 TFGYVAPAHGNIGLHLA---ELAYTMKITEKCDVYSFGVLALEVIK---GKHPGDXXXXX 728
Y A A + LAY K + K DV++FGVL E+ +PG
Sbjct: 168 ---YTAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 223
Query: 729 XXXXXXINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
D+R+ P EK+ +M C P+ RP+ + Q
Sbjct: 224 YELLEK---------DYRMERPE-GCPEKVYELMRA---CWQWNPSDRPSFAEIHQ 266
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 125/300 (41%), Gaps = 53/300 (17%)
Query: 498 YEEIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGD-KIAVKKFNSPFPNDQMSDQKEFLNE 556
Y++ D K+ +G G++ VY +AVK D M + +EFL E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTM-EVEEFLKE 64
Query: 557 IKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVI- 615
+ +I+H N+V+ G C+ +++ E++ G+L L R+ +N +
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-------RQEVNAVV 117
Query: 616 -----TGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWT 670
T ++ A+ Y+ F +HRD+++ N L+ + +V+DFG ++L+ ++ T
Sbjct: 118 LLYMATQISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--T 172
Query: 671 ELVGT---FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK---GKHPGDX 724
G + AP LAY K + K DV++FGVL E+ +PG
Sbjct: 173 AHAGAKFPIKWTAPES---------LAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID 222
Query: 725 XXXXXXXXXXINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
D+R+ P EK+ +M C P+ RP+ + Q
Sbjct: 223 LSQVYELLEK---------DYRMERPE-GCPEKVYELMRA---CWQWNPSDRPSFAEIHQ 269
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 128/292 (43%), Gaps = 51/292 (17%)
Query: 500 EIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKA 559
EI R + + K +G G+ V+ A K+AVK MS + FL E
Sbjct: 178 EIPRESLKLEKK--LGAGQFGEVWMATYNKHTKVAVKTMKP----GSMSVEA-FLAEANV 230
Query: 560 LTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVA 619
+ ++H +VK + + +++ E++ +GSL L ++ S+ K ++ +A
Sbjct: 231 MKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIA 288
Query: 620 DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYV 679
+ ++++ + +HRD+ + N+L+ +++DFG A++ WT
Sbjct: 289 EGMAFIEQRNY---IHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWT--------- 336
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI---KGKHPGDXXXXXXXXXXXIN 736
AP N G T K DV+SFG+L +E++ + +PG N
Sbjct: 337 APEAINFG----------SFTIKSDVWSFGILLMEIVTYGRIPYPG-----------MSN 375
Query: 737 IEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
E L+ +R+P P + E+L +IM + C P RPT + + +L
Sbjct: 376 PEVIRALERGYRMPRPE-NCPEELYNIM---MRCWKNRPEERPTFEYIQSVL 423
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 127/293 (43%), Gaps = 48/293 (16%)
Query: 507 DFDAKYCIGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
D++ + IG G V A P +K+A+K+ N M E L EI+A+++ H
Sbjct: 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMD---ELLKEIQAMSQCHH 72
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASED-----FDWRKRMNVITGVAD 620
NIV +Y ++V + ++ GS+ ++ + A + D ++ V +
Sbjct: 73 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 132
Query: 621 ALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKP------NSSNWTELVG 674
L Y+H + +HRD+ + N+LL + +++DFG + L N T VG
Sbjct: 133 GLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKT-FVG 188
Query: 675 TFGYVAPAHGNIGLHLAELAYTMKITE-KCDVYSFGVLALEVIKGKHPGDXXXXXXXXXX 733
T ++AP E+ ++ + K D++SFG+ A+E+ G P
Sbjct: 189 TPCWMAP----------EVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVL-- 236
Query: 734 XINIEFNAMLDHRLPHPSLD--VQEKLI------SIMEVALLCLDGCPNSRPT 778
ML + PSL+ VQ+K + S ++ LCL P RPT
Sbjct: 237 --------MLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT 281
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 26/212 (12%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
IG G+ V+ + DK+A+K MS++ +F+ E + + K+ H +V+ YG
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR----EGAMSEE-DFIEEAEVMMKLSHPKLVQLYG 69
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNN---FASEDFDWRKRMNVITGVADALSYMHHDCF 630
C +V+E++ G L+ L FA+E + + V + ++Y+
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEE--- 121
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
++HRD+++ N L+ +VSDFG + + + +T GT V A
Sbjct: 122 ASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWAS------- 172
Query: 691 AELAYTMKITEKCDVYSFGVLALEVI-KGKHP 721
E+ + + K DV+SFGVL EV +GK P
Sbjct: 173 PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 204
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 127/293 (43%), Gaps = 48/293 (16%)
Query: 507 DFDAKYCIGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
D++ + IG G V A P +K+A+K+ N M E L EI+A+++ H
Sbjct: 11 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMD---ELLKEIQAMSQCHH 67
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASED-----FDWRKRMNVITGVAD 620
NIV +Y ++V + ++ GS+ ++ + A + D ++ V +
Sbjct: 68 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 127
Query: 621 ALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKP------NSSNWTELVG 674
L Y+H + +HRD+ + N+LL + +++DFG + L N T VG
Sbjct: 128 GLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKT-FVG 183
Query: 675 TFGYVAPAHGNIGLHLAELAYTMKITE-KCDVYSFGVLALEVIKGKHPGDXXXXXXXXXX 733
T ++AP E+ ++ + K D++SFG+ A+E+ G P
Sbjct: 184 TPCWMAP----------EVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVL-- 231
Query: 734 XINIEFNAMLDHRLPHPSLD--VQEKLI------SIMEVALLCLDGCPNSRPT 778
ML + PSL+ VQ+K + S ++ LCL P RPT
Sbjct: 232 --------MLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT 276
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 100/217 (46%), Gaps = 53/217 (24%)
Query: 514 IGKGEHRSV----YRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
IGKGE V YR G+K+AVK ND + + FL E +T++RH N+V
Sbjct: 20 IGKGEFGDVMLGDYR-----GNKVAVKCIK----NDATA--QAFLAEASVMTQLRHSNLV 68
Query: 570 KFYGFCSHVRHS-FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITG----------V 618
+ G + ++V EY+ +GSL L R R + G V
Sbjct: 69 QLLGVIVEEKGGLYIVTEYMAKGSLVDYL-----------RSRGRSVLGGDCLLKFSLDV 117
Query: 619 ADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGY 678
+A+ Y+ + F VHRD+++ NVL+ + A+VSDFG L K SS T+ G
Sbjct: 118 CEAMEYLEGNNF---VHRDLAARNVLVSEDNVAKVSDFG---LTKEASS--TQDTGKL-- 167
Query: 679 VAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV 715
P L E A++ K DV+SFG+L E+
Sbjct: 168 --PVKWTAPEALREAAFST----KSDVWSFGILLWEI 198
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 123/290 (42%), Gaps = 42/290 (14%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRAKLPSGD-KIAVKKFNSPFPNDQMSDQKEFLNEIKAL 560
+ RT D K+ +G G++ VY +AVK D M + +EFL E +
Sbjct: 10 MERT-DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTM-EVEEFLKEAAVM 63
Query: 561 TKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVAD 620
+I+H N+V+ G C+ +++ E++ G+L L ++ + + T ++
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISS 122
Query: 621 ALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVA 680
A+ Y+ F +HRD+++ N L+ + +V+DFG ++L+ ++ Y A
Sbjct: 123 AMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-----------YTA 168
Query: 681 PAHGNIGLHLA---ELAYTMKITEKCDVYSFGVLALEVIK---GKHPGDXXXXXXXXXXX 734
A + LAY K + K DV++FGVL E+ +PG
Sbjct: 169 HAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 227
Query: 735 INIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
D+R+ P EK+ +M C P+ RP+ + Q
Sbjct: 228 ---------DYRMERPE-GCPEKVYELMRA---CWQWNPSDRPSFAEIHQ 264
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 125/296 (42%), Gaps = 54/296 (18%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRAKLPSGD-KIAVKKFNSPFPNDQMSDQKEFLNEIKAL 560
+ RT D K+ +G G++ VY +AVK D M + +EFL E +
Sbjct: 11 MERT-DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTM-EVEEFLKEAAVM 64
Query: 561 TKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVI----- 615
+I+H N+V+ G C+ +++ E++ G+L L R+ +N +
Sbjct: 65 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN-------RQEVNAVVLLYM 117
Query: 616 -TGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG 674
T ++ A+ Y+ F +HRD+++ N L+ + +V+DFG ++L+ ++ T G
Sbjct: 118 ATQISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAG 172
Query: 675 T---FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK---GKHPGDXXXXX 728
+ AP LAY K + K DV++FGVL E+ +PG
Sbjct: 173 AKFPIKWTAPES---------LAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 222
Query: 729 XXXXXXINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
D+R+ P EK+ +M C P+ RP+ + Q
Sbjct: 223 YELLEK---------DYRMERPE-GCPEKVYELMRA---CWQWNPSDRPSFAEIHQ 265
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 507 DFDAKYCIGKGEHRSVYRAKLPSGDKIAVKK--FNSPFPNDQMSDQKEFLNEIKALTKIR 564
DF+ +GKG+ +VY A+ I K F S + + Q EI+ +
Sbjct: 24 DFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQ--LRREIEIQAHLH 81
Query: 565 HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSY 624
H NI++ Y + R +++ EY RG L L S FD ++ ++ +ADAL Y
Sbjct: 82 HPNILRLYNYFYDRRRIYLILEYAPRGELYKELQK---SCTFDEQRTATIMEELADALMY 138
Query: 625 MHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHG 684
H ++HRDI N+LL L+ E +++DFG + + S + GT Y+ P
Sbjct: 139 CHGK---KVIHRDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKTMCGTLDYLPPEMI 193
Query: 685 NIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+H EK D++ GVL E++ G P
Sbjct: 194 EGRMH----------NEKVDLWCIGVLCYELLVGNPP 220
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 112/237 (47%), Gaps = 34/237 (14%)
Query: 504 RTKDFDAKYCIGKGEHRSVYRAK----LPSGDK--IAVKKFNSPFPNDQMSDQKEFLNEI 557
+ +D K+ +G+G V+ A+ LP DK +AVK S +++F E
Sbjct: 39 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALK----EASESARQDFQREA 94
Query: 558 KALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSL----------ATVLS--NNFASED 605
+ LT ++H++IV+F+G C+ R +V+EY+ G L A +L+ + A
Sbjct: 95 ELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP 154
Query: 606 FDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPN 665
+ + V + VA + Y+ F VHRD+++ N L+ ++ DFG ++ +
Sbjct: 155 LGLGQLLAVASQVAAGMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMSRDI--Y 209
Query: 666 SSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHP 721
S+++ + G + P I E K T + DV+SFGV+ E+ GK P
Sbjct: 210 STDYYRVGGR--TMLP----IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 123/290 (42%), Gaps = 42/290 (14%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRAKLPSGD-KIAVKKFNSPFPNDQMSDQKEFLNEIKAL 560
+ RT D K+ +G G++ VY +AVK D M + +EFL E +
Sbjct: 10 MERT-DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTM-EVEEFLKEAAVM 63
Query: 561 TKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVAD 620
+I+H N+V+ G C+ +++ E++ G+L L ++ + + T ++
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISS 122
Query: 621 ALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVA 680
A+ Y+ F +HRD+++ N L+ + +V+DFG ++L+ ++ Y A
Sbjct: 123 AMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-----------YTA 168
Query: 681 PAHGNIGLHLA---ELAYTMKITEKCDVYSFGVLALEVIK---GKHPGDXXXXXXXXXXX 734
A + LAY K + K DV++FGVL E+ +PG
Sbjct: 169 HAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 227
Query: 735 INIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
D+R+ P EK+ +M C P+ RP+ + Q
Sbjct: 228 ---------DYRMERPE-GCPEKVYELMRA---CWQWNPSDRPSFAEIHQ 264
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 123/290 (42%), Gaps = 42/290 (14%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRAKLPSGD-KIAVKKFNSPFPNDQMSDQKEFLNEIKAL 560
+ RT D K+ +G G++ VY +AVK D M + +EFL E +
Sbjct: 10 MERT-DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTM-EVEEFLKEAAVM 63
Query: 561 TKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVAD 620
+I+H N+V+ G C+ +++ E++ G+L L ++ + + T ++
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISS 122
Query: 621 ALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVA 680
A+ Y+ F +HRD+++ N L+ + +V+DFG ++L+ ++ Y A
Sbjct: 123 AMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-----------YTA 168
Query: 681 PAHGNIGLHLA---ELAYTMKITEKCDVYSFGVLALEVIK---GKHPGDXXXXXXXXXXX 734
A + LAY K + K DV++FGVL E+ +PG
Sbjct: 169 HAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 227
Query: 735 INIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
D+R+ P EK+ +M C P+ RP+ + Q
Sbjct: 228 ---------DYRMERPE-GCPEKVYELMRA---CWQWNPSDRPSFAEIHQ 264
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 126/300 (42%), Gaps = 53/300 (17%)
Query: 498 YEEIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGD-KIAVKKFNSPFPNDQMSDQKEFLNE 556
Y++ D K+ +G G++ VY +AVK D M + +EFL E
Sbjct: 209 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTM-EVEEFLKE 263
Query: 557 IKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVI- 615
+ +I+H N+V+ G C+ +++ E++ G+L L R+ +N +
Sbjct: 264 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-------RQEVNAVV 316
Query: 616 -----TGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWT 670
T ++ A+ Y+ F +HR++++ N L+ + +V+DFG ++L+ ++ +T
Sbjct: 317 LLYMATQISSAMEYLEKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YT 371
Query: 671 ELVGT---FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK---GKHPGDX 724
G + AP LAY K + K DV++FGVL E+ +PG
Sbjct: 372 AHAGAKFPIKWTAP---------ESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID 421
Query: 725 XXXXXXXXXXINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
D+R+ P EK+ +M C P+ RP+ + Q
Sbjct: 422 LSQVYELLEK---------DYRMERPE-GCPEKVYELMRA---CWQWNPSDRPSFAEIHQ 468
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 97/217 (44%), Gaps = 53/217 (24%)
Query: 514 IGKGEHRSV----YRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
IGKGE V YR G+K+AVK ND + + FL E +T++RH N+V
Sbjct: 29 IGKGEFGDVMLGDYR-----GNKVAVKCIK----NDATA--QAFLAEASVMTQLRHSNLV 77
Query: 570 KFYGFCSHVRHS-FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITG----------V 618
+ G + ++V EY+ +GSL L R R + G V
Sbjct: 78 QLLGVIVEEKGGLYIVTEYMAKGSLVDYL-----------RSRGRSVLGGDCLLKFSLDV 126
Query: 619 ADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGY 678
+A+ Y+ + F VHRD+++ NVL+ + A+VSDFG L K SS +
Sbjct: 127 CEAMEYLEGNNF---VHRDLAARNVLVSEDNVAKVSDFG---LTKEASSTQDTGKLPVKW 180
Query: 679 VAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV 715
AP E K + K DV+SFG+L E+
Sbjct: 181 TAP----------EALREKKFSTKSDVWSFGILLWEI 207
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 123/290 (42%), Gaps = 42/290 (14%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRAKLPSGD-KIAVKKFNSPFPNDQMSDQKEFLNEIKAL 560
+ RT D K+ +G G++ VY +AVK D M + +EFL E +
Sbjct: 15 MERT-DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTM-EVEEFLKEAAVM 68
Query: 561 TKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVAD 620
+I+H N+V+ G C+ +++ E++ G+L L ++ + + T ++
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISS 127
Query: 621 ALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVA 680
A+ Y+ F +HRD+++ N L+ + +V+DFG ++L+ ++ Y A
Sbjct: 128 AMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-----------YTA 173
Query: 681 PAHGNIGLHLA---ELAYTMKITEKCDVYSFGVLALEVIK---GKHPGDXXXXXXXXXXX 734
A + LAY K + K DV++FGVL E+ +PG
Sbjct: 174 HAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 232
Query: 735 INIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
D+R+ P EK+ +M C P+ RP+ + Q
Sbjct: 233 ---------DYRMERPE-GCPEKVYELMRA---CWQWNPSDRPSFAEIHQ 269
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 123/290 (42%), Gaps = 42/290 (14%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRAKLPSGD-KIAVKKFNSPFPNDQMSDQKEFLNEIKAL 560
+ RT D K+ +G G++ VY +AVK D M + +EFL E +
Sbjct: 10 MERT-DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTM-EVEEFLKEAAVM 63
Query: 561 TKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVAD 620
+I+H N+V+ G C+ +++ E++ G+L L ++ + + T ++
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISS 122
Query: 621 ALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVA 680
A+ Y+ F +HRD+++ N L+ + +V+DFG ++L+ ++ Y A
Sbjct: 123 AMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-----------YTA 168
Query: 681 PAHGNIGLHLA---ELAYTMKITEKCDVYSFGVLALEVIK---GKHPGDXXXXXXXXXXX 734
A + LAY K + K DV++FGVL E+ +PG
Sbjct: 169 HAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 227
Query: 735 INIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
D+R+ P EK+ +M C P+ RP+ + Q
Sbjct: 228 ---------DYRMERPE-GCPEKVYELMRA---CWQWNPSDRPSFAEIHQ 264
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 126/300 (42%), Gaps = 53/300 (17%)
Query: 498 YEEIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGD-KIAVKKFNSPFPNDQMSDQKEFLNE 556
Y++ D K+ +G G++ VY +AVK D M + +EFL E
Sbjct: 251 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTM-EVEEFLKE 305
Query: 557 IKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVI- 615
+ +I+H N+V+ G C+ +++ E++ G+L L R+ +N +
Sbjct: 306 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN-------RQEVNAVV 358
Query: 616 -----TGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWT 670
T ++ A+ Y+ F +HR++++ N L+ + +V+DFG ++L+ ++ +T
Sbjct: 359 LLYMATQISSAMEYLEKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YT 413
Query: 671 ELVGT---FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK---GKHPGDX 724
G + AP LAY K + K DV++FGVL E+ +PG
Sbjct: 414 AHAGAKFPIKWTAP---------ESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGID 463
Query: 725 XXXXXXXXXXINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
D+R+ P EK+ +M C P+ RP+ + Q
Sbjct: 464 LSQVYELLEK---------DYRMERPE-GCPEKVYELMRA---CWQWNPSDRPSFAEIHQ 510
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 97/217 (44%), Gaps = 53/217 (24%)
Query: 514 IGKGEHRSV----YRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
IGKGE V YR G+K+AVK ND + + FL E +T++RH N+V
Sbjct: 14 IGKGEFGDVMLGDYR-----GNKVAVKCIK----NDATA--QAFLAEASVMTQLRHSNLV 62
Query: 570 KFYGFCSHVRHS-FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITG----------V 618
+ G + ++V EY+ +GSL L R R + G V
Sbjct: 63 QLLGVIVEEKGGLYIVTEYMAKGSLVDYL-----------RSRGRSVLGGDCLLKFSLDV 111
Query: 619 ADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGY 678
+A+ Y+ + F VHRD+++ NVL+ + A+VSDFG L K SS +
Sbjct: 112 CEAMEYLEGNNF---VHRDLAARNVLVSEDNVAKVSDFG---LTKEASSTQDTGKLPVKW 165
Query: 679 VAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV 715
AP E K + K DV+SFG+L E+
Sbjct: 166 TAP----------EALREKKFSTKSDVWSFGILLWEI 192
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 119/288 (41%), Gaps = 55/288 (19%)
Query: 514 IGKGEHRSVYRAKLP-----SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNI 568
+GKG SV + +G+ +AVKK + ++F EI+ L ++H NI
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEHLRDFEREIEILKSLQHDNI 73
Query: 569 VKFYGFCSHV--RHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
VK+ G C R+ ++ EY+ GSL L + E D K + + + + Y+
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLG 131
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNI 686
+ +HRD+++ N+L++ E ++ DFG K+L P + F P I
Sbjct: 132 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEF------FKVKEPGESPI 181
Query: 687 GLHLAELAYTMKITEKCDVYSFGVLALEVI----KGKHPGDXXXXXXXXXXXINIEFNAM 742
+ E K + DV+SFGV+ E+ K K P EF M
Sbjct: 182 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP--------------AEFMRM 227
Query: 743 LDHRLPHPSLDVQEKLISIMEVALLC-------LDGCPNSRPTMQTVC 783
+ + D Q ++I + LL DGCP+ + T C
Sbjct: 228 IGN-------DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC 268
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 109/230 (47%), Gaps = 31/230 (13%)
Query: 505 TKDFDA-----KYCIGKGEHRSVY--RAKLPSGDKI--AVKKFNSPFPNDQMSDQKEFLN 555
K+ DA + IG GE V R K+P +I A+K + + + Q +++FL+
Sbjct: 23 AKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ---RRDFLS 79
Query: 556 EIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVI 615
E + + H NI+ G + + ++ EY+ GSL L N F + + ++
Sbjct: 80 EASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR--FTVIQLVGML 137
Query: 616 TGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPN-SSNWTELVG 674
G+ + Y+ VHRD+++ N+L++ +VSDFG +++L+ + + +T G
Sbjct: 138 RGIGSGMKYLSD---MSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGG 194
Query: 675 TFG--YVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHP 721
+ AP +AY K T DV+S+G++ EV+ G+ P
Sbjct: 195 KIPIRWTAPEA---------IAYR-KFTSASDVWSYGIVMWEVMSYGERP 234
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 124/290 (42%), Gaps = 42/290 (14%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRAKLPSGD-KIAVKKFNSPFPNDQMSDQKEFLNEIKAL 560
+ RT D K+ +G G++ VY +AVK D M + +EFL E +
Sbjct: 8 MERT-DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTM-EVEEFLKEAAVM 61
Query: 561 TKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVAD 620
+I+H N+V+ G C+ +++ E++ G+L L ++ + + T ++
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISS 120
Query: 621 ALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGT---FG 677
A+ Y+ F +HRD+++ N L+ + +V+DFG ++L+ ++ T G
Sbjct: 121 AMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIK 175
Query: 678 YVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK---GKHPGDXXXXXXXXXXX 734
+ AP LAY K + K DV++FGVL E+ +PG
Sbjct: 176 WTAPES---------LAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK 225
Query: 735 INIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
D+R+ P EK+ +M C P+ RP+ + Q
Sbjct: 226 ---------DYRMERPE-GCPEKVYELMRA---CWQWNPSDRPSFAEIHQ 262
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 97/217 (44%), Gaps = 53/217 (24%)
Query: 514 IGKGEHRSV----YRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
IGKGE V YR G+K+AVK ND + + FL E +T++RH N+V
Sbjct: 201 IGKGEFGDVMLGDYR-----GNKVAVKCIK----NDATA--QAFLAEASVMTQLRHSNLV 249
Query: 570 KFYGFCSHVRHS-FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITG----------V 618
+ G + ++V EY+ +GSL L R R + G V
Sbjct: 250 QLLGVIVEEKGGLYIVTEYMAKGSLVDYL-----------RSRGRSVLGGDCLLKFSLDV 298
Query: 619 ADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGY 678
+A+ Y+ + F VHRD+++ NVL+ + A+VSDFG L K SS +
Sbjct: 299 CEAMEYLEGNNF---VHRDLAARNVLVSEDNVAKVSDFG---LTKEASSTQDTGKLPVKW 352
Query: 679 VAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV 715
AP E K + K DV+SFG+L E+
Sbjct: 353 TAP----------EALREKKFSTKSDVWSFGILLWEI 379
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 125/294 (42%), Gaps = 41/294 (13%)
Query: 498 YEEIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGD-KIAVKKFNSPFPNDQMSDQKEFLNE 556
Y++ D K+ +G G++ VY +AVK D M + +EFL E
Sbjct: 212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTM-EVEEFLKE 266
Query: 557 IKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVIT 616
+ +I+H N+V+ G C+ +++ E++ G+L L ++ + + T
Sbjct: 267 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMAT 325
Query: 617 GVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGT- 675
++ A+ Y+ F +HR++++ N L+ + +V+DFG ++L+ ++ +T G
Sbjct: 326 QISSAMEYLEKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 380
Query: 676 --FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK---GKHPGDXXXXXXX 730
+ AP LAY K + K DV++FGVL E+ +PG
Sbjct: 381 FPIKWTAP---------ESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 430
Query: 731 XXXXINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
D+R+ P EK+ +M C P+ RP+ + Q
Sbjct: 431 LLEK---------DYRMERPE-GCPEKVYELMRA---CWQWNPSDRPSFAEIHQ 471
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 112/241 (46%), Gaps = 42/241 (17%)
Query: 504 RTKDFDAKYCIGKGEHRSVYRAK----LPSGDK--IAVKKFNSPFPNDQMSDQKEFLNEI 557
+ +D K+ +G+G V+ A+ LP DK +AVK S +++F E
Sbjct: 10 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA----SESARQDFQREA 65
Query: 558 KALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSL----------ATVLS--NNFASED 605
+ LT ++H++IV+F+G C+ R +V+EY+ G L A +L+ + A
Sbjct: 66 ELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP 125
Query: 606 FDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPN 665
+ + V + VA + Y+ F VHRD+++ N L+ ++ DFG ++ +
Sbjct: 126 LGLGQLLAVASQVAAGMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMSRDI--Y 180
Query: 666 SSNWTELVGT----FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKH 720
S+++ + G ++ P E K T + DV+SFGV+ E+ GK
Sbjct: 181 STDYYRVGGRTMLPIRWMPP----------ESILYRKFTTESDVWSFGVVLWEIFTYGKQ 230
Query: 721 P 721
P
Sbjct: 231 P 231
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 117/284 (41%), Gaps = 47/284 (16%)
Query: 514 IGKGEHRSVYRAKLPSGDK-IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
IG+G V+ +L + + +AVK P D + +FL E + L + H NIV+
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDL---KAKFLQEARILKQYSHPNIVRLI 178
Query: 573 GFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPP 632
G C+ + ++V E + G T L A + + ++ A + Y+ C
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGAR--LRVKTLLQMVGDAAAGMEYLESKC--- 233
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+HRD+++ N L+ + ++SDFG ++ E G + A G GL
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSR---------EEADGVYA----ASG--GLRQVP 278
Query: 693 LAYTM-------KITEKCDVYSFGVLALEVIK-GKHPGDXXXXXXXXXXXINIEFNAMLD 744
+ +T + + + DV+SFG+L E G P N + ++
Sbjct: 279 VKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS---------NQQTREFVE 329
Query: 745 H--RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
RLP P L + + +ME C P RP+ T+ Q L
Sbjct: 330 KGGRLPCPEL-CPDAVFRLMEQ---CWAYEPGQRPSFSTIYQEL 369
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 112/241 (46%), Gaps = 42/241 (17%)
Query: 504 RTKDFDAKYCIGKGEHRSVYRAK----LPSGDK--IAVKKFNSPFPNDQMSDQKEFLNEI 557
+ +D K+ +G+G V+ A+ LP DK +AVK S +++F E
Sbjct: 16 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA----SESARQDFQREA 71
Query: 558 KALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSL----------ATVLS--NNFASED 605
+ LT ++H++IV+F+G C+ R +V+EY+ G L A +L+ + A
Sbjct: 72 ELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP 131
Query: 606 FDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPN 665
+ + V + VA + Y+ F VHRD+++ N L+ ++ DFG ++ +
Sbjct: 132 LGLGQLLAVASQVAAGMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMSRDI--Y 186
Query: 666 SSNWTELVGT----FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKH 720
S+++ + G ++ P E K T + DV+SFGV+ E+ GK
Sbjct: 187 STDYYRVGGRTMLPIRWMPP----------ESILYRKFTTESDVWSFGVVLWEIFTYGKQ 236
Query: 721 P 721
P
Sbjct: 237 P 237
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 122/278 (43%), Gaps = 57/278 (20%)
Query: 532 KIAVKKFNSPFPNDQMSDQKE-FLNEIKALTKI-RHRNIVKFYGFCSHVRHSFVVYEYIN 589
K+AVK S +D+KE ++E+K ++ + +H NIV G C+H V+ EY
Sbjct: 78 KVAVKMLKS----TAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 133
Query: 590 RGSLATVLSNN-----------FASEDFDWRKRMNVITGVADALSYM-HHDCFPPIVHRD 637
G L L A+ R ++ + VA ++++ +C +HRD
Sbjct: 134 YGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNC----IHRD 189
Query: 638 ISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELA--- 694
+++ NVLL + A++ DFG A+ + N SN+ GN L + +A
Sbjct: 190 VAARNVLLTNGHVAKIGDFGLARDIM-NDSNYI-----------VKGNARLPVKWMAPES 237
Query: 695 -YTMKITEKCDVYSFGVLALEVIK---GKHPGDXXXXXXXXXXXINIEFNAMLD--HRLP 748
+ T + DV+S+G+L E+ +PG +N +F ++ +++
Sbjct: 238 IFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG----------ILVNSKFYKLVKDGYQMA 287
Query: 749 HPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
P+ + + SIM+ C P RPT Q +C L
Sbjct: 288 QPAF-APKNIYSIMQA---CWALEPTHRPTFQQICSFL 321
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 104/226 (46%), Gaps = 43/226 (19%)
Query: 513 CIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI--RHRNIVK 570
C+GKG + V+R G+ +AVK F+S D+K + E + + RH NI+
Sbjct: 44 CVGKGRYGEVWRGSW-QGENVAVKIFSS-------RDEKSWFRETELYNTVMLRHENILG 95
Query: 571 FYGFCSHVRHS----FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
F RHS +++ Y GSL L D + ++ +A L+++H
Sbjct: 96 FIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLH 151
Query: 627 HDCF-----PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTEL-----VGTF 676
+ F P I HRD+ S N+L+ + ++D G A ++ S+N ++ VGT
Sbjct: 152 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTK 210
Query: 677 GYVAPAHGNIGLHLAELAYTMKIT-----EKCDVYSFGVLALEVIK 717
Y+AP L T+++ ++ D+++FG++ EV +
Sbjct: 211 RYMAP---------EVLDETIQVDCFDSYKRVDIWAFGLVLWEVAR 247
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 101/215 (46%), Gaps = 24/215 (11%)
Query: 514 IGKGEHRSVYRAK-LPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G+G + V + + +G +A+KKF +D +K + EIK L ++RH N+V
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLES--DDDKMVKKIAMREIKLLKQLRHENLVNLL 90
Query: 573 GFCSHVRHSFVVYEYINRGSLATVLSN-NFASEDFDWRKRMNVITGVADALSYMH-HDCF 630
C + ++V+E+++ T+L + D++ + + + + + H H+
Sbjct: 91 EVCKKKKRWYLVFEFVDH----TILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN-- 144
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRDI N+L+ ++ DFG A+ L + + V T Y AP L +
Sbjct: 145 --IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPE-----LLV 197
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK--HPGD 723
++ Y + DV++ G L E+ G+ PGD
Sbjct: 198 GDVKYGKAV----DVWAIGCLVTEMFMGEPLFPGD 228
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 104/229 (45%), Gaps = 33/229 (14%)
Query: 505 TKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI- 563
+D C+GKG + V+R G+ +AVK F+S D+K + E + +
Sbjct: 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSS-------RDEKSWFRETELYNTVM 58
Query: 564 -RHRNIVKFYGFCSHVRHS----FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGV 618
RH NI+ F RHS +++ Y GSL L D + ++ +
Sbjct: 59 LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSI 114
Query: 619 ADALSYMHHDCF-----PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTEL- 672
A L+++H + F P I HRD+ S N+L+ + ++D G A ++ S+N ++
Sbjct: 115 ASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVG 173
Query: 673 ----VGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK 717
VGT Y+AP + + + ++ D+++FG++ EV +
Sbjct: 174 NNPRVGTKRYMAPEVLDETIQVD----CFDSYKRVDIWAFGLVLWEVAR 218
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 21/210 (10%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
+G G+ V+ + K+AVK MS Q FL E + ++H +V+ Y
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKP----GTMSVQA-FLEEANLMKTLQHDKLVRLYA 75
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
+ +++ EY+ +GSL L ++ + K ++ +A+ ++Y+ +
Sbjct: 76 VVTREEPIYIITEYMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIERKNY--- 131
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG-TFGYVAPAHGNIGLHLAE 692
+HRD+ + NVL+ +++DFG A++++ N E + AP N G
Sbjct: 132 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGC---- 187
Query: 693 LAYTMKITEKCDVYSFGVLALEVIK-GKHP 721
T K DV+SFG+L E++ GK P
Sbjct: 188 ------FTIKSDVWSFGILLYEIVTYGKIP 211
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 126/282 (44%), Gaps = 65/282 (23%)
Query: 532 KIAVKKFNSPFPNDQMSDQKE-FLNEIKALTKI-RHRNIVKFYGFCSHVRHSFVVYEYIN 589
K+AVK S +D+KE ++E+K ++ + +H NIV G C+H V+ EY
Sbjct: 78 KVAVKMLKS----TAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 133
Query: 590 RGSL---------------ATVLSNNFASEDFDWRKRMNVITGVADALSYM-HHDCFPPI 633
G L A ++N+ AS R ++ + VA ++++ +C
Sbjct: 134 YGDLLNFLRRKSRVLETDPAFAIANSTAST----RDLLHFSSQVAQGMAFLASKNC---- 185
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAEL 693
+HRD+++ NVLL + A++ DFG A+ + N SN+ GN L + +
Sbjct: 186 IHRDVAARNVLLTNGHVAKIGDFGLARDIM-NDSNYI-----------VKGNARLPVKWM 233
Query: 694 A----YTMKITEKCDVYSFGVLALEVIK---GKHPGDXXXXXXXXXXXINIEFNAMLD-- 744
A + T + DV+S+G+L E+ +PG +N +F ++
Sbjct: 234 APESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG----------ILVNSKFYKLVKDG 283
Query: 745 HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
+++ P+ + + SIM+ C P RPT Q +C L
Sbjct: 284 YQMAQPAF-APKNIYSIMQA---CWALEPTHRPTFQQICSFL 321
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 115/288 (39%), Gaps = 55/288 (19%)
Query: 514 IGKGEHRSVYRAKLPSGDK-IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
IG+G V+ +L + + +AVK P D + +FL E + L + H NIV+
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDL---KAKFLQEARILKQYSHPNIVRLI 178
Query: 573 GFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPP 632
G C+ + ++V E + G T L A + + ++ A + Y+ C
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGAR--LRVKTLLQMVGDAAAGMEYLESKC--- 233
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKL-----------LKPNSSNWTELVGTFGYVAP 681
+HRD+++ N L+ + ++SDFG ++ L+ WT AP
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWT---------AP 284
Query: 682 AHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXXXXXXXXXINIEFN 740
N G + +E DV+SFG+L E G P N +
Sbjct: 285 EALNYGRYSSE----------SDVWSFGILLWETFSLGASPYPNLS---------NQQTR 325
Query: 741 AMLDH--RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
++ RLP P L + + +ME C P RP+ T+ Q L
Sbjct: 326 EFVEKGGRLPCPEL-CPDAVFRLMEQ---CWAYEPGQRPSFSTIYQEL 369
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 104/226 (46%), Gaps = 43/226 (19%)
Query: 513 CIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI--RHRNIVK 570
C+GKG + V+R G+ +AVK F+S D+K + E + + RH NI+
Sbjct: 15 CVGKGRYGEVWRGSW-QGENVAVKIFSS-------RDEKSWFRETELYNTVMLRHENILG 66
Query: 571 FYGFCSHVRHS----FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
F RHS +++ Y GSL L D + ++ +A L+++H
Sbjct: 67 FIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLH 122
Query: 627 HDCF-----PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTEL-----VGTF 676
+ F P I HRD+ S N+L+ + ++D G A ++ S+N ++ VGT
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTK 181
Query: 677 GYVAPAHGNIGLHLAELAYTMKIT-----EKCDVYSFGVLALEVIK 717
Y+AP L T+++ ++ D+++FG++ EV +
Sbjct: 182 RYMAP---------EVLDETIQVDCFDSYKRVDIWAFGLVLWEVAR 218
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 123/290 (42%), Gaps = 42/290 (14%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRAKLPSGD-KIAVKKFNSPFPNDQMSDQKEFLNEIKAL 560
+ RT D K+ +G G+ VY +AVK D M + +EFL E +
Sbjct: 8 MERT-DITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLK----EDTM-EVEEFLKEAAVM 61
Query: 561 TKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVAD 620
+I+H N+V+ G C+ +++ E++ G+L L ++ + + T ++
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISS 120
Query: 621 ALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGT---FG 677
A+ Y+ F +HRD+++ N L+ + +V+DFG ++L+ ++ T G
Sbjct: 121 AMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIK 175
Query: 678 YVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK---GKHPGDXXXXXXXXXXX 734
+ AP LAY K + K DV++FGVL E+ +PG
Sbjct: 176 WTAPES---------LAYN-KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK 225
Query: 735 INIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
D+R+ P EK+ +M C P+ RP+ + Q
Sbjct: 226 ---------DYRMERPE-GCPEKVYELMRA---CWQWNPSDRPSFAEIHQ 262
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 124/281 (44%), Gaps = 61/281 (21%)
Query: 532 KIAVKKFNSPFPNDQMSDQKE-FLNEIKALTKI-RHRNIVKFYGFCSHVRHSFVVYEYIN 589
K+AVK S +D+KE ++E+K ++ + +H NIV G C+H V+ EY
Sbjct: 78 KVAVKMLKS----TAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 133
Query: 590 RGSLATVL--------------SNNFASEDFDWRKRMNVITGVADALSYM-HHDCFPPIV 634
G L L S+N E R ++ + VA ++++ +C +
Sbjct: 134 YGDLLNFLRRKRPPGLEYSYNPSHN-PEEQLSSRDLLHFSSQVAQGMAFLASKNC----I 188
Query: 635 HRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELA 694
HRD+++ NVLL + A++ DFG A+ + N SN+ GN L + +A
Sbjct: 189 HRDVAARNVLLTNGHVAKIGDFGLARDIM-NDSNYI-----------VKGNARLPVKWMA 236
Query: 695 ----YTMKITEKCDVYSFGVLALEVIK---GKHPGDXXXXXXXXXXXINIEFNAMLD--H 745
+ T + DV+S+G+L E+ +PG +N +F ++ +
Sbjct: 237 PESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG----------ILVNSKFYKLVKDGY 286
Query: 746 RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
++ P+ + + SIM+ C P RPT Q +C L
Sbjct: 287 QMAQPAF-APKNIYSIMQA---CWALEPTHRPTFQQICSFL 323
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 128/312 (41%), Gaps = 61/312 (19%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKI-AVKKFNSPFPNDQMSDQKEFLNEIKAL 560
+R DF+ +G+G V +A+ + A+KK +++S L+E+ L
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT--EEKLS---TILSEVMLL 56
Query: 561 TKIRHRNIVKFYGFCSHVRH-------------SFVVYEYI-NRGSLATVLSNNFASE-D 605
+ H+ +V++Y R+ F+ EY NR + S N + D
Sbjct: 57 ASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRD 116
Query: 606 FDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAK----- 660
WR + + +ALSY+H I+HRD+ N+ +D ++ DFG AK
Sbjct: 117 EYWR----LFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 661 --LLK------PNSS-NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVL 711
+LK P SS N T +GT YVA L T EK D+YS G++
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAMYVAT---------EVLDGTGHYNEKIDMYSLGII 220
Query: 712 ALEVIKGKHPGDXXXXXXXXXXXINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDG 771
E+I G ++IEF D + V++K+I L +D
Sbjct: 221 FFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDN----KMKVEKKIIR------LLIDH 270
Query: 772 CPNSRPTMQTVC 783
PN RP +T+
Sbjct: 271 DPNKRPGARTLL 282
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 102/237 (43%), Gaps = 31/237 (13%)
Query: 498 YEEIIRRTK-------DFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQ 550
YE+I+++ + D+D IG+G V + + K+ K S F + SD
Sbjct: 60 YEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDS 119
Query: 551 KEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRK 610
F E + +V+ + ++ ++V EY+ G L ++SN E W K
Sbjct: 120 AFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPE--KWAK 177
Query: 611 RMNVITGVA-DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTA-KLLKPNSSN 668
+A DA+ M ++HRD+ +N+LLD +++DFGT K+ + +
Sbjct: 178 FYTAEVVLALDAIHSMG------LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVH 231
Query: 669 WTELVGTFGYVAP----AHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
VGT Y++P + G G + E CD +S GV E++ G P
Sbjct: 232 CDTAVGTPDYISPEVLKSQGGDGYYGRE----------CDWWSVGVFLFEMLVGDTP 278
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 23/209 (11%)
Query: 514 IGKGEHRSVYRAKLP-----SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNI 568
+GKG SV + +G+ +AVKK + ++F EI+ L ++H NI
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEHLRDFEREIEILKSLQHDNI 91
Query: 569 VKFYGFCSHV--RHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
VK+ G C R+ ++ EY+ GSL L + E D K + + + + Y+
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLG 149
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNI 686
+ +HRD+++ N+L++ E ++ DFG K+L P ++ P I
Sbjct: 150 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKV------KEPGESPI 199
Query: 687 GLHLAELAYTMKITEKCDVYSFGVLALEV 715
+ E K + DV+SFGV+ E+
Sbjct: 200 FWYAPESLTESKFSVASDVWSFGVVLYEL 228
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 98/219 (44%), Gaps = 27/219 (12%)
Query: 514 IGKGEHRSVYRAKLP-----SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNI 568
+GKG SV + +G+ +AVKK + ++F EI+ L ++H NI
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEHLRDFEREIEILKSLQHDNI 104
Query: 569 VKFYGFCSHV--RHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
VK+ G C R+ ++ EY+ GSL L + E D K + + + + Y+
Sbjct: 105 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLG 162
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNI 686
+ +HRD+++ N+L++ E ++ DFG K+L P ++ P I
Sbjct: 163 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKV------KEPGESPI 212
Query: 687 GLHLAELAYTMKITEKCDVYSFGVLALEVI----KGKHP 721
+ E K + DV+SFGV+ E+ K K P
Sbjct: 213 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 251
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 23/209 (11%)
Query: 514 IGKGEHRSVYRAKLP-----SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNI 568
+GKG SV + +G+ +AVKK + ++F EI+ L ++H NI
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEHLRDFEREIEILKSLQHDNI 91
Query: 569 VKFYGFCSHV--RHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
VK+ G C R+ ++ EY+ GSL L + E D K + + + + Y+
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLG 149
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNI 686
+ +HRD+++ N+L++ E ++ DFG K+L P ++ P I
Sbjct: 150 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKV------KEPGESPI 199
Query: 687 GLHLAELAYTMKITEKCDVYSFGVLALEV 715
+ E K + DV+SFGV+ E+
Sbjct: 200 FWYAPESLTESKFSVASDVWSFGVVLYEL 228
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 115/271 (42%), Gaps = 41/271 (15%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
+G G+ V+ K+AVK MS FL E + +++H+ +V+ Y
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLK----QGSMSPDA-FLAEANLMKQLQHQRLVRLYA 84
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
+ +++ EY+ GSL L + K +++ +A+ ++++ +
Sbjct: 85 VVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNY--- 139
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG-TFGYVAPAHGNIGLHLAE 692
+HRD+ + N+L+ +++DFG A+L++ N E + AP N G
Sbjct: 140 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG----- 194
Query: 693 LAYTMKITEKCDVYSFGVLALEVI---KGKHPGDXXXXXXXXXXXINIEFNAMLD--HRL 747
T K DV+SFG+L E++ + +PG N E L+ +R+
Sbjct: 195 -----TFTIKSDVWSFGILLTEIVTHGRIPYPG-----------MTNPEVIQNLERGYRM 238
Query: 748 PHPSLDVQEKLISIMEVALLCLDGCPNSRPT 778
P + E+L +M LC P RPT
Sbjct: 239 VRPD-NCPEELYQLMR---LCWKERPEDRPT 265
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 23/209 (11%)
Query: 514 IGKGEHRSVYRAKLP-----SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNI 568
+GKG SV + +G+ +AVKK + ++F EI+ L ++H NI
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEHLRDFEREIEILKSLQHDNI 73
Query: 569 VKFYGFCSHV--RHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
VK+ G C R+ ++ EY+ GSL L + E D K + + + + Y+
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLG 131
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNI 686
+ +HRD+++ N+L++ E ++ DFG K+L P ++ P I
Sbjct: 132 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKV------KEPGESPI 181
Query: 687 GLHLAELAYTMKITEKCDVYSFGVLALEV 715
+ E K + DV+SFGV+ E+
Sbjct: 182 FWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 23/209 (11%)
Query: 514 IGKGEHRSVYRAKLP-----SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNI 568
+GKG SV + +G+ +AVKK + ++F EI+ L ++H NI
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEHLRDFEREIEILKSLQHDNI 77
Query: 569 VKFYGFCSHV--RHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
VK+ G C R+ ++ EY+ GSL L + E D K + + + + Y+
Sbjct: 78 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLG 135
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNI 686
+ +HRD+++ N+L++ E ++ DFG K+L P ++ P I
Sbjct: 136 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKV------KEPGESPI 185
Query: 687 GLHLAELAYTMKITEKCDVYSFGVLALEV 715
+ E K + DV+SFGV+ E+
Sbjct: 186 FWYAPESLTESKFSVASDVWSFGVVLYEL 214
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 119/288 (41%), Gaps = 55/288 (19%)
Query: 514 IGKGEHRSVYRAKLP-----SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNI 568
+GKG SV + +G+ +AVKK + ++F EI+ L ++H NI
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEHLRDFEREIEILKSLQHDNI 80
Query: 569 VKFYGFCSHV--RHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
VK+ G C R+ ++ EY+ GSL L + E D K + + + + Y+
Sbjct: 81 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLG 138
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNI 686
+ +HRD+++ N+L++ E ++ DFG K+L P ++ P I
Sbjct: 139 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKV------KEPGESPI 188
Query: 687 GLHLAELAYTMKITEKCDVYSFGVLALEVI----KGKHPGDXXXXXXXXXXXINIEFNAM 742
+ E K + DV+SFGV+ E+ K K P EF M
Sbjct: 189 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP--------------AEFMRM 234
Query: 743 LDHRLPHPSLDVQEKLISIMEVALLC-------LDGCPNSRPTMQTVC 783
+ + D Q ++I + LL DGCP+ + T C
Sbjct: 235 IGN-------DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC 275
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 115/271 (42%), Gaps = 41/271 (15%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
+G G+ V+ K+AVK MS FL E + +++H+ +V+ Y
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLK----QGSMSPDA-FLAEANLMKQLQHQRLVRLYA 83
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
+ +++ EY+ GSL L + K +++ +A+ ++++ +
Sbjct: 84 VVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNY--- 138
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG-TFGYVAPAHGNIGLHLAE 692
+HRD+ + N+L+ +++DFG A+L++ N E + AP N G
Sbjct: 139 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG----- 193
Query: 693 LAYTMKITEKCDVYSFGVLALEVI---KGKHPGDXXXXXXXXXXXINIEFNAMLD--HRL 747
T K DV+SFG+L E++ + +PG N E L+ +R+
Sbjct: 194 -----TFTIKSDVWSFGILLTEIVTHGRIPYPG-----------MTNPEVIQNLERGYRM 237
Query: 748 PHPSLDVQEKLISIMEVALLCLDGCPNSRPT 778
P + E+L +M LC P RPT
Sbjct: 238 VRPD-NCPEELYQLMR---LCWKERPEDRPT 264
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 23/209 (11%)
Query: 514 IGKGEHRSVYRAKLP-----SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNI 568
+GKG SV + +G+ +AVKK + ++F EI+ L ++H NI
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEHLRDFEREIEILKSLQHDNI 73
Query: 569 VKFYGFCSHV--RHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
VK+ G C R+ ++ EY+ GSL L + E D K + + + + Y+
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLG 131
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNI 686
+ +HRD+++ N+L++ E ++ DFG K+L P ++ P I
Sbjct: 132 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKV------KEPGESPI 181
Query: 687 GLHLAELAYTMKITEKCDVYSFGVLALEV 715
+ E K + DV+SFGV+ E+
Sbjct: 182 FWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 23/209 (11%)
Query: 514 IGKGEHRSVYRAKLP-----SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNI 568
+GKG SV + +G+ +AVKK + ++F EI+ L ++H NI
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEHLRDFEREIEILKSLQHDNI 76
Query: 569 VKFYGFCSHV--RHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
VK+ G C R+ ++ EY+ GSL L + E D K + + + + Y+
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLG 134
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNI 686
+ +HRD+++ N+L++ E ++ DFG K+L P ++ P I
Sbjct: 135 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKV------KEPGESPI 184
Query: 687 GLHLAELAYTMKITEKCDVYSFGVLALEV 715
+ E K + DV+SFGV+ E+
Sbjct: 185 FWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 115/271 (42%), Gaps = 41/271 (15%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
+G G+ V+ K+AVK MS FL E + +++H+ +V+ Y
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLK----QGSMSPDA-FLAEANLMKQLQHQRLVRLYA 77
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
+ +++ EY+ GSL L + K +++ +A+ ++++ +
Sbjct: 78 VVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNY--- 132
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG-TFGYVAPAHGNIGLHLAE 692
+HRD+ + N+L+ +++DFG A+L++ N E + AP N G
Sbjct: 133 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG----- 187
Query: 693 LAYTMKITEKCDVYSFGVLALEVI---KGKHPGDXXXXXXXXXXXINIEFNAMLD--HRL 747
T K DV+SFG+L E++ + +PG N E L+ +R+
Sbjct: 188 -----TFTIKSDVWSFGILLTEIVTHGRIPYPG-----------MTNPEVIQNLERGYRM 231
Query: 748 PHPSLDVQEKLISIMEVALLCLDGCPNSRPT 778
P + E+L +M LC P RPT
Sbjct: 232 VRPD-NCPEELYQLMR---LCWKERPEDRPT 258
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 23/209 (11%)
Query: 514 IGKGEHRSVYRAKLP-----SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNI 568
+GKG SV + +G+ +AVKK + ++F EI+ L ++H NI
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEHLRDFEREIEILKSLQHDNI 72
Query: 569 VKFYGFCSHV--RHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
VK+ G C R+ ++ EY+ GSL L + E D K + + + + Y+
Sbjct: 73 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLG 130
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNI 686
+ +HRD+++ N+L++ E ++ DFG K+L P ++ P I
Sbjct: 131 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKV------KEPGESPI 180
Query: 687 GLHLAELAYTMKITEKCDVYSFGVLALEV 715
+ E K + DV+SFGV+ E+
Sbjct: 181 FWYAPESLTESKFSVASDVWSFGVVLYEL 209
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 23/209 (11%)
Query: 514 IGKGEHRSVYRAKLP-----SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNI 568
+GKG SV + +G+ +AVKK + ++F EI+ L ++H NI
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEHLRDFEREIEILKSLQHDNI 79
Query: 569 VKFYGFCSHV--RHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
VK+ G C R+ ++ EY+ GSL L + E D K + + + + Y+
Sbjct: 80 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLG 137
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNI 686
+ +HRD+++ N+L++ E ++ DFG K+L P ++ P I
Sbjct: 138 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKV------KEPGESPI 187
Query: 687 GLHLAELAYTMKITEKCDVYSFGVLALEV 715
+ E K + DV+SFGV+ E+
Sbjct: 188 FWYAPESLTESKFSVASDVWSFGVVLYEL 216
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 23/209 (11%)
Query: 514 IGKGEHRSVYRAKLP-----SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNI 568
+GKG SV + +G+ +AVKK + ++F EI+ L ++H NI
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEHLRDFEREIEILKSLQHDNI 71
Query: 569 VKFYGFCSHV--RHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
VK+ G C R+ ++ EY+ GSL L + E D K + + + + Y+
Sbjct: 72 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLG 129
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNI 686
+ +HRD+++ N+L++ E ++ DFG K+L P ++ P I
Sbjct: 130 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKV------KEPGESPI 179
Query: 687 GLHLAELAYTMKITEKCDVYSFGVLALEV 715
+ E K + DV+SFGV+ E+
Sbjct: 180 FWYAPESLTESKFSVASDVWSFGVVLYEL 208
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 506 KDFDAKYCIGKGE----HRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALT 561
+ +D K IG+G R V+RA +G + AVK +++S ++ L E++ T
Sbjct: 94 QKYDPKDVIGRGVSSVVRRCVHRA---TGHEFAVKIME--VTAERLSPEQ--LEEVREAT 146
Query: 562 KIR---------HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRM 612
+ H +I+ F+V++ + +G L L+ A + + R
Sbjct: 147 RRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETR--- 203
Query: 613 NVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTEL 672
+++ + +A+S++H + IVHRD+ N+LLD + R+SDFG + L+P EL
Sbjct: 204 SIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPG-EKLREL 259
Query: 673 VGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
GT GY+AP + Y ++ D+++ GV+ ++ G P
Sbjct: 260 CGTPGYLAPEILKCSMDETHPGYGKEV----DLWACGVILFTLLAGSPP 304
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 115/271 (42%), Gaps = 41/271 (15%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
+G G+ V+ K+AVK MS FL E + +++H+ +V+ Y
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK----QGSMSPDA-FLAEANLMKQLQHQRLVRLYA 81
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
+ +++ EY+ GSL L + K +++ +A+ ++++ +
Sbjct: 82 VVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNY--- 136
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG-TFGYVAPAHGNIGLHLAE 692
+HRD+ + N+L+ +++DFG A+L++ N E + AP N G
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG----- 191
Query: 693 LAYTMKITEKCDVYSFGVLALEVI---KGKHPGDXXXXXXXXXXXINIEFNAMLD--HRL 747
T K DV+SFG+L E++ + +PG N E L+ +R+
Sbjct: 192 -----TFTIKSDVWSFGILLTEIVTHGRIPYPG-----------MTNPEVIQNLERGYRM 235
Query: 748 PHPSLDVQEKLISIMEVALLCLDGCPNSRPT 778
P + E+L +M LC P RPT
Sbjct: 236 VRPD-NCPEELYQLMR---LCWKERPEDRPT 262
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 23/209 (11%)
Query: 514 IGKGEHRSVYRAKLP-----SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNI 568
+GKG SV + +G+ +AVKK + ++F EI+ L ++H NI
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEHLRDFEREIEILKSLQHDNI 78
Query: 569 VKFYGFCSHV--RHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
VK+ G C R+ ++ EY+ GSL L + E D K + + + + Y+
Sbjct: 79 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLG 136
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNI 686
+ +HRD+++ N+L++ E ++ DFG K+L P ++ P I
Sbjct: 137 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKV------KEPGESPI 186
Query: 687 GLHLAELAYTMKITEKCDVYSFGVLALEV 715
+ E K + DV+SFGV+ E+
Sbjct: 187 FWYAPESLTESKFSVASDVWSFGVVLYEL 215
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 27/219 (12%)
Query: 514 IGKGEHRSVYRAKLP-----SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNI 568
+GKG SV + +G+ +AVKK + ++F EI+ L ++H NI
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEHLRDFEREIEILKSLQHDNI 76
Query: 569 VKFYGFCSHV--RHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
VK+ G C R+ ++ EY+ GSL L + +E D K + + + + Y+
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAH--AERIDHIKLLQYTSQICKGMEYLG 134
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNI 686
+ +HRD+++ N+L++ E ++ DFG K+L P ++ P I
Sbjct: 135 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKV------KEPGESPI 184
Query: 687 GLHLAELAYTMKITEKCDVYSFGVLALEVI----KGKHP 721
+ E K + DV+SFGV+ E+ K K P
Sbjct: 185 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 223
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 115/271 (42%), Gaps = 41/271 (15%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
+G G+ V+ K+AVK MS FL E + +++H+ +V+ Y
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLK----QGSMSPDA-FLAEANLMKQLQHQRLVRLYA 76
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
+ +++ EY+ GSL L + K +++ +A+ ++++ +
Sbjct: 77 VVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNY--- 131
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG-TFGYVAPAHGNIGLHLAE 692
+HRD+ + N+L+ +++DFG A+L++ N E + AP N G
Sbjct: 132 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG----- 186
Query: 693 LAYTMKITEKCDVYSFGVLALEVI---KGKHPGDXXXXXXXXXXXINIEFNAMLD--HRL 747
T K DV+SFG+L E++ + +PG N E L+ +R+
Sbjct: 187 -----TFTIKSDVWSFGILLTEIVTHGRIPYPG-----------MTNPEVIQNLERGYRM 230
Query: 748 PHPSLDVQEKLISIMEVALLCLDGCPNSRPT 778
P + E+L +M LC P RPT
Sbjct: 231 VRPD-NCPEELYQLMR---LCWKERPEDRPT 257
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 115/271 (42%), Gaps = 41/271 (15%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
+G G+ V+ K+AVK MS FL E + +++H+ +V+ Y
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK----QGSMSPDA-FLAEANLMKQLQHQRLVRLYA 75
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
+ +++ EY+ GSL L + K +++ +A+ ++++ +
Sbjct: 76 VVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNY--- 130
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG-TFGYVAPAHGNIGLHLAE 692
+HRD+ + N+L+ +++DFG A+L++ N E + AP N G
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG----- 185
Query: 693 LAYTMKITEKCDVYSFGVLALEVI---KGKHPGDXXXXXXXXXXXINIEFNAMLD--HRL 747
T K DV+SFG+L E++ + +PG N E L+ +R+
Sbjct: 186 -----TFTIKSDVWSFGILLTEIVTHGRIPYPG-----------MTNPEVIQNLERGYRM 229
Query: 748 PHPSLDVQEKLISIMEVALLCLDGCPNSRPT 778
P + E+L +M LC P RPT
Sbjct: 230 VRPD-NCPEELYQLMR---LCWKERPEDRPT 256
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 118/279 (42%), Gaps = 41/279 (14%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
+G G+ V+ K+AVK MS FL E + +++H+ +V+ Y
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK----QGSMSPDA-FLAEANLMKQLQHQRLVRLYA 75
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
+ +++ EY+ GSL L + K +++ +A+ ++++ +
Sbjct: 76 VVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNY--- 130
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG-TFGYVAPAHGNIGLHLAE 692
+HRD+ + N+L+ +++DFG A+L++ N E + AP N G
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG----- 185
Query: 693 LAYTMKITEKCDVYSFGVLALEVI---KGKHPGDXXXXXXXXXXXINIEFNAMLD--HRL 747
T K DV+SFG+L E++ + +PG N E L+ +R+
Sbjct: 186 -----TFTIKSDVWSFGILLTEIVTHGRIPYPG-----------MTNPEVIQNLERGYRM 229
Query: 748 PHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
P + E+L +M LC P RPT + +L
Sbjct: 230 VRPD-NCPEELYQLMR---LCWKERPEDRPTFDYLRSVL 264
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 109/211 (51%), Gaps = 23/211 (10%)
Query: 514 IGKGEHRSVYRAK-LPSGDKIAVKKFNSPFPNDQMSDQ-KEFLNEIKALTKIRHRNIVKF 571
IG G +VY A+ + + + +A+KK + + Q +++ ++ + E++ L K+RH N +++
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMS--YSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 119
Query: 572 YGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH-HDCF 630
G +++V EY GS + +L + + + V G L+Y+H H+
Sbjct: 120 RGCYLREHTAWLVMEYC-LGSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSHN-- 174
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
++HRD+ + N+LL ++ DFG+A ++ P + VGT ++AP + L +
Sbjct: 175 --MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX----FVGTPYWMAP---EVILAM 225
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
E Y K+ DV+S G+ +E+ + K P
Sbjct: 226 DEGQYDGKV----DVWSLGITCIELAERKPP 252
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 118/279 (42%), Gaps = 41/279 (14%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
+G G+ V+ K+AVK MS FL E + +++H+ +V+ Y
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLK----QGSMSPDA-FLAEANLMKQLQHQRLVRLYA 70
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
+ +++ EY+ GSL L + K +++ +A+ ++++ +
Sbjct: 71 VVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNY--- 125
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG-TFGYVAPAHGNIGLHLAE 692
+HRD+ + N+L+ +++DFG A+L++ N E + AP N G
Sbjct: 126 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG----- 180
Query: 693 LAYTMKITEKCDVYSFGVLALEVI---KGKHPGDXXXXXXXXXXXINIEFNAMLD--HRL 747
T K DV+SFG+L E++ + +PG N E L+ +R+
Sbjct: 181 -----TFTIKSDVWSFGILLTEIVTHGRIPYPG-----------MTNPEVIQNLERGYRM 224
Query: 748 PHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
P + E+L +M LC P RPT + +L
Sbjct: 225 VRPD-NCPEELYQLMR---LCWKERPEDRPTFDYLRSVL 259
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 119/288 (41%), Gaps = 55/288 (19%)
Query: 514 IGKGEHRSVYRAKLP-----SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNI 568
+GKG SV + +G+ +AVKK + ++F EI+ L ++H NI
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEHLRDFEREIEILKSLQHDNI 74
Query: 569 VKFYGFCSHV--RHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
VK+ G C R+ ++ EY+ GSL L + E D K + + + + Y+
Sbjct: 75 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLG 132
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNI 686
+ +HR++++ N+L++ E ++ DFG K+L P + + P I
Sbjct: 133 TKRY---IHRNLATRNILVENENRVKIGDFGLTKVL-PQDKEY------YKVKEPGESPI 182
Query: 687 GLHLAELAYTMKITEKCDVYSFGVLALEVI----KGKHPGDXXXXXXXXXXXINIEFNAM 742
+ E K + DV+SFGV+ E+ K K P EF M
Sbjct: 183 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP--------------AEFMRM 228
Query: 743 LDHRLPHPSLDVQEKLISIMEVALLC-------LDGCPNSRPTMQTVC 783
+ + D Q ++I + LL DGCP+ + T C
Sbjct: 229 IGN-------DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTEC 269
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 115/271 (42%), Gaps = 41/271 (15%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
+G G+ V+ K+AVK MS FL E + +++H+ +V+ Y
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLK----QGSMSPDA-FLAEANLMKQLQHQRLVRLYA 85
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
+ +++ EY+ GSL L + K +++ +A+ ++++ +
Sbjct: 86 VVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNY--- 140
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG-TFGYVAPAHGNIGLHLAE 692
+HRD+ + N+L+ +++DFG A+L++ N E + AP N G
Sbjct: 141 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG----- 195
Query: 693 LAYTMKITEKCDVYSFGVLALEVI---KGKHPGDXXXXXXXXXXXINIEFNAMLD--HRL 747
T K DV+SFG+L E++ + +PG N E L+ +R+
Sbjct: 196 -----TFTIKSDVWSFGILLTEIVTHGRIPYPG-----------MTNPEVIQNLERGYRM 239
Query: 748 PHPSLDVQEKLISIMEVALLCLDGCPNSRPT 778
P + E+L +M LC P RPT
Sbjct: 240 VRPD-NCPEELYQLMR---LCWKERPEDRPT 266
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 118/279 (42%), Gaps = 41/279 (14%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
+G G+ V+ K+AVK MS FL E + +++H+ +V+ Y
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK----QGSMSPDA-FLAEANLMKQLQHQRLVRLYA 75
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
+ +++ EY+ GSL L + K +++ +A+ ++++ +
Sbjct: 76 VVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNY--- 130
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG-TFGYVAPAHGNIGLHLAE 692
+HRD+ + N+L+ +++DFG A+L++ N E + AP N G
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG----- 185
Query: 693 LAYTMKITEKCDVYSFGVLALEVI---KGKHPGDXXXXXXXXXXXINIEFNAMLD--HRL 747
T K DV+SFG+L E++ + +PG N E L+ +R+
Sbjct: 186 -----TFTIKSDVWSFGILLTEIVTHGRIPYPG-----------MTNPEVIQNLERGYRM 229
Query: 748 PHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
P + E+L +M LC P RPT + +L
Sbjct: 230 VRPD-NCPEELYQLMR---LCWKERPEDRPTFDYLRSVL 264
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 28/219 (12%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRAKLPSGD-KIAVKKFNSPFPNDQMSDQKEFLNEIKAL 560
+ RT D K+ +G G++ VY +AVK D M + +EFL E +
Sbjct: 29 MERT-DITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLK----EDTM-EVEEFLKEAAVM 82
Query: 561 TKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVAD 620
+I+H N+V+ G C+ ++V EY+ G+L L E+ + + T ++
Sbjct: 83 KEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL-RECNREEVTAVVLLYMATQISS 141
Query: 621 ALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVA 680
A+ Y+ F +HRD+++ N L+ + +V+DFG ++L+ ++ Y A
Sbjct: 142 AMEYLEKKNF---IHRDLAARNCLVGENHVVKVADFGLSRLMTGDT-----------YTA 187
Query: 681 PAHGNIGLHLA---ELAY-TMKITEKCDVYSFGVLALEV 715
A + LAY T I K DV++FGVL E+
Sbjct: 188 HAGAKFPIKWTAPESLAYNTFSI--KSDVWAFGVLLWEI 224
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 115/271 (42%), Gaps = 41/271 (15%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
+G G+ V+ K+AVK MS FL E + +++H+ +V+ Y
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK----QGSMSPDA-FLAEANLMKQLQHQRLVRLYA 81
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
+ +++ EY+ GSL L + K +++ +A+ ++++ +
Sbjct: 82 VVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNY--- 136
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG-TFGYVAPAHGNIGLHLAE 692
+HRD+ + N+L+ +++DFG A+L++ N E + AP N G
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG----- 191
Query: 693 LAYTMKITEKCDVYSFGVLALEVI---KGKHPGDXXXXXXXXXXXINIEFNAMLD--HRL 747
T K DV+SFG+L E++ + +PG N E L+ +R+
Sbjct: 192 -----TFTIKSDVWSFGILLTEIVTHGRIPYPG-----------MTNPEVIQNLERGYRM 235
Query: 748 PHPSLDVQEKLISIMEVALLCLDGCPNSRPT 778
P + E+L +M LC P RPT
Sbjct: 236 VRPD-NCPEELYQLMR---LCWKERPEDRPT 262
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 19/210 (9%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
IG G +VY+ K + + K P P + F NE+ L K RH NI+ F G
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQA----FRNEVAVLRKTRHVNILLFMG 99
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
+ + + +V ++ SL L + F + +++ A + Y+H I
Sbjct: 100 YMTKDNLA-IVTQWCEGSSLYKHL--HVQETKFQMFQLIDIARQTAQGMDYLHAKN---I 153
Query: 634 VHRDISSNNVLLDLEYEARVSDFG--TAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLA 691
+HRD+ SNN+ L ++ DFG T K S + G+ ++AP +
Sbjct: 154 IHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAP-------EVI 206
Query: 692 ELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + DVYS+G++ E++ G+ P
Sbjct: 207 RMQDNNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 98/220 (44%), Gaps = 27/220 (12%)
Query: 508 FDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHR 566
+ + +GKG V K +G + AVK S Q +D++ L E++ L ++ H
Sbjct: 51 YKGQRVLGKGSFGEVILCKDKITGQECAVKVI-SKRQVKQKTDKESLLREVQLLKQLDHP 109
Query: 567 NIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
NI+K Y F + ++V E G L + + F +I V ++YMH
Sbjct: 110 NIMKLYEFFEDKGYFYLVGEVYTGGEL---FDEIISRKRFSEVDAARIIRQVLSGITYMH 166
Query: 627 HDCFPPIVHRDISSNNVLLDLEYE---ARVSDFGTAKLLKPNSSNWTELVGTFGYVAPA- 682
+ IVHRD+ N+LL+ + + R+ DFG + + S + +GT Y+AP
Sbjct: 167 KN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYIAPEV 222
Query: 683 -HGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
HG EKCDV+S GV+ ++ G P
Sbjct: 223 LHGT-------------YDEKCDVWSTGVILYILLSGCPP 249
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 115/271 (42%), Gaps = 41/271 (15%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
+G G+ V+ K+AVK MS FL E + +++H+ +V+ Y
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLK----QGSMSPDA-FLAEANLMKQLQHQRLVRLYA 80
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
+ +++ EY+ GSL L + K +++ +A+ ++++ +
Sbjct: 81 VVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNY--- 135
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG-TFGYVAPAHGNIGLHLAE 692
+HRD+ + N+L+ +++DFG A+L++ N E + AP N G
Sbjct: 136 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG----- 190
Query: 693 LAYTMKITEKCDVYSFGVLALEVI---KGKHPGDXXXXXXXXXXXINIEFNAMLD--HRL 747
T K DV+SFG+L E++ + +PG N E L+ +R+
Sbjct: 191 -----TFTIKSDVWSFGILLTEIVTHGRIPYPG-----------MTNPEVIQNLERGYRM 234
Query: 748 PHPSLDVQEKLISIMEVALLCLDGCPNSRPT 778
P + E+L +M LC P RPT
Sbjct: 235 VRPD-NCPEELYQLMR---LCWKERPEDRPT 261
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 98/227 (43%), Gaps = 36/227 (15%)
Query: 514 IGKGEHRSVYRAKL----PSGDKI--AVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRN 567
+G+G V+ A+ P DKI AVK N + K+F E + LT ++H +
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNAR----KDFHREAELLTNLQHEH 76
Query: 568 IVKFYGFCSHVRHSFVVYEYINRGSL----------ATVLSNNFASEDFDWRKRMNVITG 617
IVKFYG C +V+EY+ G L A +++ + + +++
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 618 VADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFG 677
+A + Y+ F VHRD+++ N L+ ++ DFG ++ ++ T
Sbjct: 137 IAAGMVYLASQHF---VHRDLATRNCLVGENLLVKIGDFGMSR----------DVYSTDY 183
Query: 678 YVAPAHGNIGLHLAELAYTM--KITEKCDVYSFGVLALEVIK-GKHP 721
Y H + + M K T + DV+S GV+ E+ GK P
Sbjct: 184 YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 98/220 (44%), Gaps = 27/220 (12%)
Query: 508 FDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHR 566
+ + +GKG V K +G + AVK S Q +D++ L E++ L ++ H
Sbjct: 52 YKGQRVLGKGSFGEVILCKDKITGQECAVKVI-SKRQVKQKTDKESLLREVQLLKQLDHP 110
Query: 567 NIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
NI+K Y F + ++V E G L + + F +I V ++YMH
Sbjct: 111 NIMKLYEFFEDKGYFYLVGEVYTGGEL---FDEIISRKRFSEVDAARIIRQVLSGITYMH 167
Query: 627 HDCFPPIVHRDISSNNVLLDLEYE---ARVSDFGTAKLLKPNSSNWTELVGTFGYVAPA- 682
+ IVHRD+ N+LL+ + + R+ DFG + + S + +GT Y+AP
Sbjct: 168 KN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYIAPEV 223
Query: 683 -HGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
HG EKCDV+S GV+ ++ G P
Sbjct: 224 LHGT-------------YDEKCDVWSTGVILYILLSGCPP 250
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 37/215 (17%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
IG+G + VY+A+ G+ A+KK ++ + + EI L +++H NIVK Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT--IREISILKELKHSNIVKLYD 67
Query: 574 FCSHVRHSFVVYEYINR----------GSLATVLSNNFASEDFDWRKRMNVITGVADALS 623
+ +V+E++++ G L +V + +F + ++ G+A
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL---------LQLLNGIA---- 114
Query: 624 YMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAH 683
Y H ++HRD+ N+L++ E E +++DFG A+ +T V T Y AP
Sbjct: 115 YCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAP-- 169
Query: 684 GNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKG 718
L + K + D++S G + E++ G
Sbjct: 170 -------DVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 98/220 (44%), Gaps = 27/220 (12%)
Query: 508 FDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHR 566
+ + +GKG V K +G + AVK S Q +D++ L E++ L ++ H
Sbjct: 34 YKGQRVLGKGSFGEVILCKDKITGQECAVKVI-SKRQVKQKTDKESLLREVQLLKQLDHP 92
Query: 567 NIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
NI+K Y F + ++V E G L + + F +I V ++YMH
Sbjct: 93 NIMKLYEFFEDKGYFYLVGEVYTGGEL---FDEIISRKRFSEVDAARIIRQVLSGITYMH 149
Query: 627 HDCFPPIVHRDISSNNVLLDLEYE---ARVSDFGTAKLLKPNSSNWTELVGTFGYVAPA- 682
+ IVHRD+ N+LL+ + + R+ DFG + + S + +GT Y+AP
Sbjct: 150 KN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYIAPEV 205
Query: 683 -HGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
HG EKCDV+S GV+ ++ G P
Sbjct: 206 LHGT-------------YDEKCDVWSTGVILYILLSGCPP 232
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 98/220 (44%), Gaps = 27/220 (12%)
Query: 508 FDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHR 566
+ + +GKG V K +G + AVK S Q +D++ L E++ L ++ H
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVI-SKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 567 NIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
NI+K Y F + ++V E G L + + F +I V ++YMH
Sbjct: 87 NIMKLYEFFEDKGYFYLVGEVYTGGEL---FDEIISRKRFSEVDAARIIRQVLSGITYMH 143
Query: 627 HDCFPPIVHRDISSNNVLLDLEYE---ARVSDFGTAKLLKPNSSNWTELVGTFGYVAPA- 682
+ IVHRD+ N+LL+ + + R+ DFG + + S + +GT Y+AP
Sbjct: 144 KN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYIAPEV 199
Query: 683 -HGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
HG EKCDV+S GV+ ++ G P
Sbjct: 200 LHGT-------------YDEKCDVWSTGVILYILLSGCPP 226
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 124/287 (43%), Gaps = 66/287 (22%)
Query: 532 KIAVKKFNSPFPNDQMSDQKE-FLNEIKALTKI-RHRNIVKFYGFCSHVRHSFVVYEYIN 589
K+AVK S +D+KE ++E+K ++ + +H NIV G C+H V+ EY
Sbjct: 63 KVAVKMLKS----TAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 118
Query: 590 RGSLATVLSNNFAS-----------------ED---FDWRKRMNVITGVADALSYM-HHD 628
G L L + ED + R ++ + VA ++++ +
Sbjct: 119 YGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN 178
Query: 629 CFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGL 688
C +HRD+++ NVLL + A++ DFG A+ + N SN+ GN L
Sbjct: 179 C----IHRDVAARNVLLTNGHVAKIGDFGLARDIM-NDSNYI-----------VKGNARL 222
Query: 689 HLAELA----YTMKITEKCDVYSFGVLALEVIK---GKHPGDXXXXXXXXXXXINIEFNA 741
+ +A + T + DV+S+G+L E+ +PG +N +F
Sbjct: 223 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG----------ILVNSKFYK 272
Query: 742 MLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
++ +++ P+ + + SIM+ C P RPT Q +C L
Sbjct: 273 LVKDGYQMAQPAF-APKNIYSIMQA---CWALEPTHRPTFQQICSFL 315
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 109/211 (51%), Gaps = 23/211 (10%)
Query: 514 IGKGEHRSVYRAK-LPSGDKIAVKKFNSPFPNDQMSDQ-KEFLNEIKALTKIRHRNIVKF 571
IG G +VY A+ + + + +A+KK + + Q +++ ++ + E++ L K+RH N +++
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMS--YSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 80
Query: 572 YGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH-HDCF 630
G +++V EY GS + +L + + + V G L+Y+H H+
Sbjct: 81 RGCYLREHTAWLVMEYC-LGSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSHN-- 135
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
++HRD+ + N+LL ++ DFG+A ++ P + VGT ++AP + L +
Sbjct: 136 --MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX----FVGTPYWMAP---EVILAM 186
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
E Y K+ DV+S G+ +E+ + K P
Sbjct: 187 DEGQYDGKV----DVWSLGITCIELAERKPP 213
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 37/215 (17%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
IG+G + VY+A+ G+ A+KK ++ + + EI L +++H NIVK Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT--IREISILKELKHSNIVKLYD 67
Query: 574 FCSHVRHSFVVYEYINR----------GSLATVLSNNFASEDFDWRKRMNVITGVADALS 623
+ +V+E++++ G L +V + +F + ++ G+A
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL---------LQLLNGIA---- 114
Query: 624 YMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAH 683
Y H ++HRD+ N+L++ E E +++DFG A+ +T V T Y AP
Sbjct: 115 YCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAP-- 169
Query: 684 GNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKG 718
L + K + D++S G + E++ G
Sbjct: 170 -------DVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 83/171 (48%), Gaps = 22/171 (12%)
Query: 555 NEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSL-ATVLSNNFASEDFDWRKRMN 613
NEI L KI+H NIV H +++ + ++ G L ++ F +E R
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE----RDASR 120
Query: 614 VITGVADALSYMHHDCFPPIVHRDISSNNVL---LDLEYEARVSDFGTAKLLKPNSSNWT 670
+I V DA+ Y+H IVHRD+ N+L LD + + +SDFG +K+ P S T
Sbjct: 121 LIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST 177
Query: 671 ELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
GT GYVAP LA+ Y+ + D +S GV+A ++ G P
Sbjct: 178 -ACGTPGYVAPE------VLAQKPYSKAV----DCWSIGVIAYILLCGYPP 217
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 83/171 (48%), Gaps = 22/171 (12%)
Query: 555 NEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSL-ATVLSNNFASEDFDWRKRMN 613
NEI L KI+H NIV H +++ + ++ G L ++ F +E R
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE----RDASR 120
Query: 614 VITGVADALSYMHHDCFPPIVHRDISSNNVL---LDLEYEARVSDFGTAKLLKPNSSNWT 670
+I V DA+ Y+H IVHRD+ N+L LD + + +SDFG +K+ P S T
Sbjct: 121 LIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST 177
Query: 671 ELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
GT GYVAP LA+ Y+ + D +S GV+A ++ G P
Sbjct: 178 -ACGTPGYVAPE------VLAQKPYSKAV----DCWSIGVIAYILLCGYPP 217
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 98/215 (45%), Gaps = 37/215 (17%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
IG+G + VY+A+ G+ A+KK ++ + + EI L +++H NIVK Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT--IREISILKELKHSNIVKLYD 67
Query: 574 FCSHVRHSFVVYEYINR----------GSLATVLSNNFASEDFDWRKRMNVITGVADALS 623
+ +V+E++++ G L +V + +F + ++ G+A
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL---------LQLLNGIA---- 114
Query: 624 YMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAH 683
Y H ++HRD+ N+L++ E E +++DFG A+ +T + T Y AP
Sbjct: 115 YCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAP-- 169
Query: 684 GNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKG 718
L + K + D++S G + E++ G
Sbjct: 170 -------DVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 23/209 (11%)
Query: 514 IGKGEHRSVYRAKLP-----SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNI 568
+GKG SV + +G+ +AVKK + ++F EI+ L ++H NI
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ----HSTEEHLRDFEREIEILKSLQHDNI 76
Query: 569 VKFYGFCSHV--RHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
VK+ G C R+ ++ E++ GSL L + E D K + + + + Y+
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKH--KERIDHIKLLQYTSQICKGMEYLG 134
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNI 686
+ +HRD+++ N+L++ E ++ DFG K+L P ++ P I
Sbjct: 135 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEXXKV------KEPGESPI 184
Query: 687 GLHLAELAYTMKITEKCDVYSFGVLALEV 715
+ E K + DV+SFGV+ E+
Sbjct: 185 FWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 21/210 (10%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
+G G+ V+ + K+AVK MS Q FL E + ++H +V+ Y
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKP----GTMSVQA-FLEEANLMKTLQHDKLVRLYA 74
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
+ +++ E++ +GSL L ++ + K ++ +A+ ++Y+ +
Sbjct: 75 VVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIERKNY--- 130
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG-TFGYVAPAHGNIGLHLAE 692
+HRD+ + NVL+ +++DFG A++++ N E + AP N G
Sbjct: 131 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGC---- 186
Query: 693 LAYTMKITEKCDVYSFGVLALEVIK-GKHP 721
T K +V+SFG+L E++ GK P
Sbjct: 187 ------FTIKSNVWSFGILLYEIVTYGKIP 210
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 17/167 (10%)
Query: 555 NEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV 614
EI L++ + K+YG +++ EY+ GS +L + FD + +
Sbjct: 70 QEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLR----AGPFDEFQIATM 125
Query: 615 ITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG 674
+ + L Y+H + +HRDI + NVLL + + +++DFG A L VG
Sbjct: 126 LKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVG 182
Query: 675 TFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
T ++AP E+ K D++S G+ A+E+ KG+ P
Sbjct: 183 TPFWMAP----------EVIQQSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 83/171 (48%), Gaps = 22/171 (12%)
Query: 555 NEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSL-ATVLSNNFASEDFDWRKRMN 613
NEI L KI+H NIV H +++ + ++ G L ++ F +E R
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE----RDASR 120
Query: 614 VITGVADALSYMHHDCFPPIVHRDISSNNVL---LDLEYEARVSDFGTAKLLKPNSSNWT 670
+I V DA+ Y+H IVHRD+ N+L LD + + +SDFG +K+ P S T
Sbjct: 121 LIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST 177
Query: 671 ELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
GT GYVAP LA+ Y+ + D +S GV+A ++ G P
Sbjct: 178 -ACGTPGYVAPE------VLAQKPYSKAV----DCWSIGVIAYILLCGYPP 217
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 83/171 (48%), Gaps = 22/171 (12%)
Query: 555 NEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSL-ATVLSNNFASEDFDWRKRMN 613
NEI L KI+H NIV H +++ + ++ G L ++ F +E R
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE----RDASR 120
Query: 614 VITGVADALSYMHHDCFPPIVHRDISSNNVL---LDLEYEARVSDFGTAKLLKPNSSNWT 670
+I V DA+ Y+H IVHRD+ N+L LD + + +SDFG +K+ P S T
Sbjct: 121 LIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST 177
Query: 671 ELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
GT GYVAP LA+ Y+ + D +S GV+A ++ G P
Sbjct: 178 -ACGTPGYVAPE------VLAQKPYSKAV----DCWSIGVIAYILLCGYPP 217
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 504 RTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
+ +D++ IG+G V + S K+ K S F + SD F E +
Sbjct: 72 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA 131
Query: 564 RHRNIVK-FYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADAL 622
+V+ FY F R+ ++V EY+ G L ++SN E W + V AL
Sbjct: 132 NSPWVVQLFYAFQDD-RYLYMVMEYMPGGDLVNLMSNYDVPE--KWARFYT--AEVVLAL 186
Query: 623 SYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTA-KLLKPNSSNWTELVGTFGYVAP 681
+H F +HRD+ +N+LLD +++DFGT K+ K VGT Y++P
Sbjct: 187 DAIHSMGF---IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISP 243
Query: 682 ----AHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ G G + E CD +S GV E++ G P
Sbjct: 244 EVLKSQGGDGYYGRE----------CDWWSVGVFLYEMLVGDTP 277
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 504 RTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
+ +D++ IG+G V + S K+ K S F + SD F E +
Sbjct: 72 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA 131
Query: 564 RHRNIVK-FYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADAL 622
+V+ FY F R+ ++V EY+ G L ++SN E W + V AL
Sbjct: 132 NSPWVVQLFYAFQDD-RYLYMVMEYMPGGDLVNLMSNYDVPE--KWARFYT--AEVVLAL 186
Query: 623 SYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTA-KLLKPNSSNWTELVGTFGYVAP 681
+H F +HRD+ +N+LLD +++DFGT K+ K VGT Y++P
Sbjct: 187 DAIHSMGF---IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISP 243
Query: 682 ----AHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ G G + E CD +S GV E++ G P
Sbjct: 244 EVLKSQGGDGYYGRE----------CDWWSVGVFLYEMLVGDTP 277
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 118/279 (42%), Gaps = 41/279 (14%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
+G G+ V+ K+AVK MS FL E + +++H+ +V+ Y
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLK----QGSMSPDA-FLAEANLMKQLQHQRLVRLYA 71
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
+ +++ EY+ GSL L + K +++ +A+ ++++ +
Sbjct: 72 VVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNY--- 126
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG-TFGYVAPAHGNIGLHLAE 692
+HR++ + N+L+ +++DFG A+L++ N E + AP N G
Sbjct: 127 IHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG----- 181
Query: 693 LAYTMKITEKCDVYSFGVLALEVI---KGKHPGDXXXXXXXXXXXINIEFNAMLD--HRL 747
T K DV+SFG+L E++ + +PG N E L+ +R+
Sbjct: 182 -----TFTIKSDVWSFGILLTEIVTHGRIPYPG-----------MTNPEVIQNLERGYRM 225
Query: 748 PHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
P + E+L +M LC P RPT + +L
Sbjct: 226 VRPD-NCPEELYQLMR---LCWKERPEDRPTFDYLRSVL 260
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 504 RTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
+ +D++ IG+G V + S K+ K S F + SD F E +
Sbjct: 67 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA 126
Query: 564 RHRNIVK-FYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADAL 622
+V+ FY F R+ ++V EY+ G L ++SN E W + V AL
Sbjct: 127 NSPWVVQLFYAFQDD-RYLYMVMEYMPGGDLVNLMSNYDVPE--KWARFYT--AEVVLAL 181
Query: 623 SYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTA-KLLKPNSSNWTELVGTFGYVAP 681
+H F +HRD+ +N+LLD +++DFGT K+ K VGT Y++P
Sbjct: 182 DAIHSMGF---IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISP 238
Query: 682 ----AHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ G G + E CD +S GV E++ G P
Sbjct: 239 EVLKSQGGDGYYGRE----------CDWWSVGVFLYEMLVGDTP 272
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 32/216 (14%)
Query: 515 GKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGF 574
+G V++A+L + + +AVK F P D+ S Q E+ E+ +L ++H NI++F G
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAVKIF--PI-QDKQSWQNEY--EVYSLPGMKHENILQFIG- 85
Query: 575 CSHVRHS------FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHD 628
+ R + +++ + +GSL+ L N S W + ++ +A L+Y+H D
Sbjct: 86 -AEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVS----WNELCHIAETMARGLAYLHED 140
Query: 629 C-------FPPIVHRDISSNNVLLDLEYEARVSDFGTA-KLLKPNSSNWTE-LVGTFGYV 679
P I HRDI S NVLL A ++DFG A K S+ T VGT Y+
Sbjct: 141 IPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYM 200
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV 715
AP ++ A+ + D+Y+ G++ E+
Sbjct: 201 APEVLEGAINFQRDAFL-----RIDMYAMGLVLWEL 231
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 114/271 (42%), Gaps = 41/271 (15%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
+G G+ V+ K+AVK MS FL E + +++H+ +V+ Y
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLK----QGSMSPDA-FLAEANLMKQLQHQRLVRLYA 75
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
+ +++ EY+ GSL L + K +++ +A+ ++++ +
Sbjct: 76 VVTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERNY--- 130
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG-TFGYVAPAHGNIGLHLAE 692
+HRD+ + N+L+ +++DFG A+L++ E + AP N G
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYG----- 185
Query: 693 LAYTMKITEKCDVYSFGVLALEVI---KGKHPGDXXXXXXXXXXXINIEFNAMLD--HRL 747
T K DV+SFG+L E++ + +PG N E L+ +R+
Sbjct: 186 -----TFTIKSDVWSFGILLTEIVTHGRIPYPG-----------MTNPEVIQNLERGYRM 229
Query: 748 PHPSLDVQEKLISIMEVALLCLDGCPNSRPT 778
P + E+L +M LC P RPT
Sbjct: 230 VRPD-NCPEELYQLMR---LCWKERPEDRPT 256
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 125/312 (40%), Gaps = 61/312 (19%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKI-AVKKFNSPFPNDQMSDQKEFLNEIKAL 560
+R DF+ +G+G V +A+ + A+KK +++S L+E+ L
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT--EEKLS---TILSEVXLL 56
Query: 561 TKIRHRNIVKFYGFCSHVRHS-------------FVVYEYI-NRGSLATVLSNNFASE-D 605
+ H+ +V++Y R+ F+ EY NR + S N + D
Sbjct: 57 ASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRD 116
Query: 606 FDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAK----- 660
WR + + +ALSY+H I+HR++ N+ +D ++ DFG AK
Sbjct: 117 EYWR----LFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 661 --LLK------PNSS-NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVL 711
+LK P SS N T +GT YVA L T EK D YS G++
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAXYVAT---------EVLDGTGHYNEKIDXYSLGII 220
Query: 712 ALEVIKGKHPGDXXXXXXXXXXXINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDG 771
E I G ++IEF D V++K+I L +D
Sbjct: 221 FFEXIYPFSTGXERVNILKKLRSVSIEFPPDFDDN----KXKVEKKIIR------LLIDH 270
Query: 772 CPNSRPTMQTVC 783
PN RP +T+
Sbjct: 271 DPNKRPGARTLL 282
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 19/175 (10%)
Query: 550 QKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWR 609
+ E L E + ++ + IV+ G C +V E G L L N +D +
Sbjct: 414 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD---K 469
Query: 610 KRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
+ ++ V+ + Y+ F VHRD+++ NVLL ++ A++SDFG +K L+ + +
Sbjct: 470 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENY- 525
Query: 670 TELVGTFGYVAPAHGN--IGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHP 721
Y A HG + + E K + K DV+SFGVL E G+ P
Sbjct: 526 --------YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 19/175 (10%)
Query: 550 QKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWR 609
+ E L E + ++ + IV+ G C +V E G L L N +D +
Sbjct: 415 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD---K 470
Query: 610 KRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
+ ++ V+ + Y+ F VHRD+++ NVLL ++ A++SDFG +K L+ + +
Sbjct: 471 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENY- 526
Query: 670 TELVGTFGYVAPAHGN--IGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHP 721
Y A HG + + E K + K DV+SFGVL E G+ P
Sbjct: 527 --------YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 19/175 (10%)
Query: 550 QKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWR 609
+ E L E + ++ + IV+ G C +V E G L L N +D +
Sbjct: 56 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 111
Query: 610 KRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
+ ++ V+ + Y+ F VHRD+++ NVLL ++ A++SDFG +K L+ + +
Sbjct: 112 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENX- 167
Query: 670 TELVGTFGYVAPAHGN--IGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHP 721
Y A HG + + E K + K DV+SFGVL E G+ P
Sbjct: 168 --------YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 118/273 (43%), Gaps = 27/273 (9%)
Query: 503 RRTKDFDAKYCIGKGEHRSVYRAKLPSGD-KIAVKKFNSPFPNDQMSDQKEFLNEIKALT 561
R DF+ C+G+G V+ AK D A+K+ PN +++ +K + E+KAL
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIR--LPNRELAREK-VMREVKALA 58
Query: 562 KIRHRNIVKFYGFCSHVR-------HSFVVYEYIN-----RGSLATVLSNNFASEDFDWR 609
K+ H IV+++ S VY YI + +L ++ E+ +
Sbjct: 59 KLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERS 118
Query: 610 KRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
+++ +A+A+ ++H ++HRD+ +N+ ++ +V DFG + +
Sbjct: 119 VCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 175
Query: 670 TELVGTFGYVAPAHGNIGLHL---AELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXX 726
T L Y A G +G L E + + K D++S G++ E++ +P
Sbjct: 176 TVLTPMPAY-ARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL---YPFSTQM 231
Query: 727 XXXXXXXXI-NIEFNAMLDHRLPHPSLDVQEKL 758
+ N++F + + P + VQ+ L
Sbjct: 232 ERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDML 264
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 20/192 (10%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRG 591
K+A+K P P ++ K F E+ +++ H+NIV ++V EYI
Sbjct: 38 KVAIKAIFIP-PREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGP 96
Query: 592 SLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEA 651
+L+ + ++ +N + D + + H IVHRDI N+L+D
Sbjct: 97 TLSEYIESHGP---LSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTL 150
Query: 652 RVSDFGTAKLLKPNSSNWT-ELVGTFGYVAPAHGNIGLHLAELAYTMKITEKC-DVYSFG 709
++ DFG AK L S T ++GT Y +P + T++C D+YS G
Sbjct: 151 KIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAK-----------GEATDECTDIYSIG 199
Query: 710 VLALEVIKGKHP 721
++ E++ G+ P
Sbjct: 200 IVLYEMLVGEPP 211
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 19/175 (10%)
Query: 550 QKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWR 609
+ E L E + ++ + IV+ G C +V E G L L N +D +
Sbjct: 56 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD---K 111
Query: 610 KRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
+ ++ V+ + Y+ F VHRD+++ NVLL ++ A++SDFG +K L+ + +
Sbjct: 112 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENY- 167
Query: 670 TELVGTFGYVAPAHGN--IGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHP 721
Y A HG + + E K + K DV+SFGVL E G+ P
Sbjct: 168 --------YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 19/175 (10%)
Query: 550 QKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWR 609
+ E L E + ++ + IV+ G C +V E G L L N +D +
Sbjct: 70 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD---K 125
Query: 610 KRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
+ ++ V+ + Y+ F VHRD+++ NVLL ++ A++SDFG +K L+ + +
Sbjct: 126 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENY- 181
Query: 670 TELVGTFGYVAPAHGN--IGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHP 721
Y A HG + + E K + K DV+SFGVL E G+ P
Sbjct: 182 --------YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 19/175 (10%)
Query: 550 QKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWR 609
+ E L E + ++ + IV+ G C +V E G L L N +D +
Sbjct: 72 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 127
Query: 610 KRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
+ ++ V+ + Y+ F VHRD+++ NVLL ++ A++SDFG +K L+ + +
Sbjct: 128 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENY- 183
Query: 670 TELVGTFGYVAPAHGN--IGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHP 721
Y A HG + + E K + K DV+SFGVL E G+ P
Sbjct: 184 --------YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 19/175 (10%)
Query: 550 QKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWR 609
+ E L E + ++ + IV+ G C +V E G L L N +D +
Sbjct: 72 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 127
Query: 610 KRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
+ ++ V+ + Y+ F VHRD+++ NVLL ++ A++SDFG +K L+ + +
Sbjct: 128 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENY- 183
Query: 670 TELVGTFGYVAPAHGN--IGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHP 721
Y A HG + + E K + K DV+SFGVL E G+ P
Sbjct: 184 --------YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 19/175 (10%)
Query: 550 QKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWR 609
+ E L E + ++ + IV+ G C +V E G L L N +D +
Sbjct: 50 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD---K 105
Query: 610 KRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
+ ++ V+ + Y+ F VHRD+++ NVLL ++ A++SDFG +K L+ + +
Sbjct: 106 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENY- 161
Query: 670 TELVGTFGYVAPAHGN--IGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHP 721
Y A HG + + E K + K DV+SFGVL E G+ P
Sbjct: 162 --------YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 17/167 (10%)
Query: 555 NEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV 614
EI L++ + K+YG +++ EY+ GS +L D + +
Sbjct: 74 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG----PLDETQIATI 129
Query: 615 ITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG 674
+ + L Y+H + +HRDI + NVLL E +++DFG A L VG
Sbjct: 130 LREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVG 186
Query: 675 TFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
T ++AP E+ K D++S G+ A+E+ +G+ P
Sbjct: 187 TPFWMAP----------EVIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 80/177 (45%), Gaps = 21/177 (11%)
Query: 548 SDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFD 607
S + L E+ L + H NI+K Y F R+ ++V E G L + + + D
Sbjct: 78 SSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVD 137
Query: 608 WRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLD-LEYEA--RVSDFGTAKLLKP 664
+I V ++Y+H IVHRD+ N+LL+ E +A ++ DFG + + +
Sbjct: 138 ---AAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE- 190
Query: 665 NSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
N E +GT Y+AP K EKCDV+S GV+ ++ G P
Sbjct: 191 NQKKMKERLGTAYYIAPE-----------VLRKKYDEKCDVWSIGVILFILLAGYPP 236
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 19/175 (10%)
Query: 550 QKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWR 609
+ E L E + ++ + IV+ G C +V E G L L N +D +
Sbjct: 62 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD---K 117
Query: 610 KRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
+ ++ V+ + Y+ F VHRD+++ NVLL ++ A++SDFG +K L+ + +
Sbjct: 118 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENY- 173
Query: 670 TELVGTFGYVAPAHGN--IGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHP 721
Y A HG + + E K + K DV+SFGVL E G+ P
Sbjct: 174 --------YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 33/218 (15%)
Query: 515 GKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGF 574
+G V++A+L D +AVK F P D+ S Q E EI + ++H N+++F
Sbjct: 24 ARGRFGCVWKAQL-MNDFVAVKIF--PL-QDKQSWQSE--REIFSTPGMKHENLLQF--I 75
Query: 575 CSHVRHS------FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHD 628
+ R S +++ + ++GSL L N + W + +V ++ LSY+H D
Sbjct: 76 AAEKRGSNLEVELWLITAFHDKGSLTDYLKGNIIT----WNELCHVAETMSRGLSYLHED 131
Query: 629 C--------FPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNS--SNWTELVGTFGY 678
P I HRD S NVLL + A ++DFG A +P + VGT Y
Sbjct: 132 VPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRY 191
Query: 679 VAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI 716
+AP ++ A+ + D+Y+ G++ E++
Sbjct: 192 MAPEVLEGAINFQRDAFL-----RIDMYAMGLVLWELV 224
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 100/224 (44%), Gaps = 42/224 (18%)
Query: 514 IGKGEHRSVYRAKLPSGD---KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHR-NIV 569
IG+G V +A++ A+K+ D D ++F E++ L K+ H NI+
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD---DHRDFAGELEVLCKLGHHPNII 89
Query: 570 KFYGFCSHVRHSFVVYEYINRGSL--------------ATVLSNNFASEDFDWRKRMNVI 615
G C H + ++ EY G+L A ++N+ AS ++ ++
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST-LSSQQLLHFA 148
Query: 616 TGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGT 675
VA + Y+ F +HRD+++ N+L+ Y A+++DFG ++ G
Sbjct: 149 ADVARGMDYLSQKQF---IHRDLAARNILVGENYVAKIADFGLSR-------------GQ 192
Query: 676 FGYVAPAHGNI---GLHLAELAYTMKITEKCDVYSFGVLALEVI 716
YV G + + + L Y++ T DV+S+GVL E++
Sbjct: 193 EVYVKKTMGRLPVRWMAIESLNYSV-YTTNSDVWSYGVLLWEIV 235
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 102/227 (44%), Gaps = 25/227 (11%)
Query: 505 TKDFDA-----KYCIGKGEHRSVY--RAKLPSGDKIAV--KKFNSPFPNDQMSDQKEFLN 555
K+ DA + IG GE V R KLP +AV K + Q +++FL
Sbjct: 37 AKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQ---RRDFLC 93
Query: 556 EIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVI 615
E + + H N+V G + + +V E++ G+L L + F + + ++
Sbjct: 94 EASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQ--FTVIQLVGML 151
Query: 616 TGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGT 675
G+A + Y+ + VHRD+++ N+L++ +VSDFG +++++ + + T
Sbjct: 152 RGIAAGMRYLADMGY---VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEA---VYTT 205
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHP 721
G P E K T DV+S+G++ EV+ G+ P
Sbjct: 206 TGGKIPVRWT----APEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 102/223 (45%), Gaps = 36/223 (16%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNE--IKALTKIRHRNIVKF 571
IG+G + +VY+ L +AVK F+ F N Q F+NE I + + H NI +F
Sbjct: 21 IGRGRYGAVYKGSLDE-RPVAVKVFS--FANRQ-----NFINEKNIYRVPLMEHDNIARF 72
Query: 572 YGFCSHVRHS-----FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
V +V EY GSL LS + + DW + V L+Y+H
Sbjct: 73 IVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS----DWVSSCRLAHSVTRGLAYLH 128
Query: 627 HDC------FPPIVHRDISSNNVLLDLEYEARVSDFGTA------KLLKPNSSNWTEL-- 672
+ P I HRD++S NVL+ + +SDFG + +L++P + +
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE 188
Query: 673 VGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV 715
VGT Y+AP ++L + +K + D+Y+ G++ E+
Sbjct: 189 VGTIRYMAPEVLEGAVNLRDXESALK---QVDMYALGLIYWEI 228
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 19/175 (10%)
Query: 550 QKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWR 609
+ E L E + ++ + IV+ G C +V E G L L N +D +
Sbjct: 52 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD---K 107
Query: 610 KRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
+ ++ V+ + Y+ F VHRD+++ NVLL ++ A++SDFG +K L+ + +
Sbjct: 108 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENY- 163
Query: 670 TELVGTFGYVAPAHGN--IGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHP 721
Y A HG + + E K + K DV+SFGVL E G+ P
Sbjct: 164 --------YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 17/167 (10%)
Query: 555 NEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV 614
EI L++ + K+YG +++ EY+ GS +L D + +
Sbjct: 69 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG----PLDETQIATI 124
Query: 615 ITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG 674
+ + L Y+H + +HRDI + NVLL E +++DFG A L VG
Sbjct: 125 LREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVG 181
Query: 675 TFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
T ++AP E+ K D++S G+ A+E+ +G+ P
Sbjct: 182 TPFWMAP----------EVIKQSAYDSKADIWSLGITAIELARGEPP 218
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 100/224 (44%), Gaps = 42/224 (18%)
Query: 514 IGKGEHRSVYRAKLPSGD---KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIV 569
IG+G V +A++ A+K+ D D ++F E++ L K+ H NI+
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD---DHRDFAGELEVLCKLGHHPNII 79
Query: 570 KFYGFCSHVRHSFVVYEYINRGSL--------------ATVLSNNFASEDFDWRKRMNVI 615
G C H + ++ EY G+L A ++N+ AS ++ ++
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST-LSSQQLLHFA 138
Query: 616 TGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGT 675
VA + Y+ F +HRD+++ N+L+ Y A+++DFG ++ G
Sbjct: 139 ADVARGMDYLSQKQF---IHRDLAARNILVGENYVAKIADFGLSR-------------GQ 182
Query: 676 FGYVAPAHGNI---GLHLAELAYTMKITEKCDVYSFGVLALEVI 716
YV G + + + L Y++ T DV+S+GVL E++
Sbjct: 183 EVYVKKTMGRLPVRWMAIESLNYSVYTTNS-DVWSYGVLLWEIV 225
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 17/167 (10%)
Query: 555 NEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV 614
EI L++ + K+YG +++ EY+ GS +L D + +
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG----PLDETQIATI 109
Query: 615 ITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG 674
+ + L Y+H + +HRDI + NVLL E +++DFG A L VG
Sbjct: 110 LREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVG 166
Query: 675 TFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
T ++AP E+ K D++S G+ A+E+ +G+ P
Sbjct: 167 TPFWMAP----------EVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 88/195 (45%), Gaps = 17/195 (8%)
Query: 529 SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYI 588
+G K+AVK N + + EI+ L RH +I+K Y S F+V EY+
Sbjct: 35 TGHKVAVKILNRQ-KIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYV 93
Query: 589 NRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLE 648
+ G L + + E+ + R+ + + A+ Y H +VHRD+ NVLLD
Sbjct: 94 SGGELFDYICKHGRVEEMEARR---LFQQILSAVDYCHRHM---VVHRDLKPENVLLDAH 147
Query: 649 YEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSF 708
A+++DFG + ++ + + G+ Y AP ++ + + D++S
Sbjct: 148 MNAKIADFGLSNMMS-DGEFLRDSCGSPNYAAP---------EVISGRLYAGPEVDIWSC 197
Query: 709 GVLALEVIKGKHPGD 723
GV+ ++ G P D
Sbjct: 198 GVILYALLCGTLPFD 212
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 87/195 (44%), Gaps = 17/195 (8%)
Query: 529 SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYI 588
+G K+AVK N + + EI+ L RH +I+K Y S F+V EY+
Sbjct: 35 TGHKVAVKILNRQ-KIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYV 93
Query: 589 NRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLE 648
+ G L + + E+ + R+ + + A+ Y H +VHRD+ NVLLD
Sbjct: 94 SGGELFDYICKHGRVEEMEARR---LFQQILSAVDYCHRHM---VVHRDLKPENVLLDAH 147
Query: 649 YEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSF 708
A+++DFG + ++ T G+ Y AP ++ + + D++S
Sbjct: 148 MNAKIADFGLSNMMSDGEFLRTS-CGSPNYAAP---------EVISGRLYAGPEVDIWSC 197
Query: 709 GVLALEVIKGKHPGD 723
GV+ ++ G P D
Sbjct: 198 GVILYALLCGTLPFD 212
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 17/167 (10%)
Query: 555 NEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV 614
EI L++ + K+YG +++ EY+ GS +L D + +
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG----PLDETQIATI 109
Query: 615 ITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG 674
+ + L Y+H + +HRDI + NVLL E +++DFG A L VG
Sbjct: 110 LREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVG 166
Query: 675 TFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
T ++AP E+ K D++S G+ A+E+ +G+ P
Sbjct: 167 TPFWMAP----------EVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 19/214 (8%)
Query: 511 KYCIGKGEHRSVYRAK-LPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
+ +GKG + VY + L + +IA+K+ P + EI ++H+NIV
Sbjct: 13 RVVLGKGTYGIVYAGRDLSNQVRIAIKEI----PERDSRYSQPLHEEIALHKHLKHKNIV 68
Query: 570 KFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDC 629
++ G S + E + GSL+ +L + + + + + + L Y+H +
Sbjct: 69 QYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN- 127
Query: 630 FPPIVHRDISSNNVLLDLEYEA--RVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIG 687
IVHRDI +NVL++ Y ++SDFGT+K L + GT Y+AP + G
Sbjct: 128 --QIVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKG 184
Query: 688 LHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ D++S G +E+ GK P
Sbjct: 185 --------PRGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 19/214 (8%)
Query: 511 KYCIGKGEHRSVYRAK-LPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
+ +GKG + VY + L + +IA+K+ P + EI ++H+NIV
Sbjct: 27 RVVLGKGTYGIVYAGRDLSNQVRIAIKEI----PERDSRYSQPLHEEIALHKHLKHKNIV 82
Query: 570 KFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDC 629
++ G S + E + GSL+ +L + + + + + + L Y+H +
Sbjct: 83 QYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN- 141
Query: 630 FPPIVHRDISSNNVLLDLEYEA--RVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIG 687
IVHRDI +NVL++ Y ++SDFGT+K L + GT Y+AP + G
Sbjct: 142 --QIVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKG 198
Query: 688 LHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ D++S G +E+ GK P
Sbjct: 199 --------PRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 90/213 (42%), Gaps = 19/213 (8%)
Query: 514 IGKGEHRSVYRAKL--PSGDKI--AVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
IG+G VY L G KI AVK N + + +FL E + H N++
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR---ITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 570 KFYGFCSHVRHS-FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHD 628
G C S VV Y+ G L + N + + + + VA + Y+
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKYLASK 170
Query: 629 CFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGL 688
F VHRD+++ N +LD ++ +V+DFG A+ + + + G P +
Sbjct: 171 KF---VHRDLAARNCMLDEKFTVKVADFGLARDM--YDKEYYSVHNKTGAKLP----VKW 221
Query: 689 HLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
E T K T K DV+SFGVL E++ P
Sbjct: 222 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 28/222 (12%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKI-AVKKFNSPFPNDQMSDQKEFL-NEIKALTKI 563
K F+ K +G G V A+ + K+ AVK P + ++ + NEI L KI
Sbjct: 22 KIFEFKETLGTGAFSEVVLAEEKATGKLFAVK----CIPKKALKGKESSIENEIAVLRKI 77
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSL-ATVLSNNFASEDFDWRKRMNVITGVADAL 622
+H NIV H ++V + ++ G L ++ F +E + +I V DA+
Sbjct: 78 KHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTE----KDASTLIRQVLDAV 133
Query: 623 SYMHHDCFPPIVHRDISSNNVLL---DLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYV 679
Y+H IVHRD+ N+L D E + +SDFG +K ++ + GT GYV
Sbjct: 134 YYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSK-MEGKGDVMSTACGTPGYV 189
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
AP LA+ Y+ + D +S GV+A ++ G P
Sbjct: 190 APE------VLAQKPYSKAV----DCWSIGVIAYILLCGYPP 221
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 88/190 (46%), Gaps = 17/190 (8%)
Query: 529 SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV--VYE 586
+G+++AVK + ++D K+ EI+ L + H NIVK+ G C+ + + + E
Sbjct: 37 TGEQVAVKSLKPESGGNHIADLKK---EIEILRNLYHENIVKYKGICTEDGGNGIKLIME 93
Query: 587 YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLD 646
++ GSL L N + ++++ + + Y+ + VHRD+++ NVL++
Sbjct: 94 FLPSGSLKEYLPKN--KNKINLKQQLKYAVQICKGMDYLGSRQY---VHRDLAARNVLVE 148
Query: 647 LEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVY 706
E++ ++ DFG K ++ + T + + E K DV+
Sbjct: 149 SEHQVKIGDFGLTKAIETDKEXXT-------VKDDRDSPVFWYAPECLMQSKFYIASDVW 201
Query: 707 SFGVLALEVI 716
SFGV E++
Sbjct: 202 SFGVTLHELL 211
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 88/190 (46%), Gaps = 17/190 (8%)
Query: 529 SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV--VYE 586
+G+++AVK + ++D K+ EI+ L + H NIVK+ G C+ + + + E
Sbjct: 49 TGEQVAVKSLKPESGGNHIADLKK---EIEILRNLYHENIVKYKGICTEDGGNGIKLIME 105
Query: 587 YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLD 646
++ GSL L N + ++++ + + Y+ + VHRD+++ NVL++
Sbjct: 106 FLPSGSLKEYLPKN--KNKINLKQQLKYAVQICKGMDYLGSRQY---VHRDLAARNVLVE 160
Query: 647 LEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVY 706
E++ ++ DFG K ++ + T + + E K DV+
Sbjct: 161 SEHQVKIGDFGLTKAIETDKEXXT-------VKDDRDSPVFWYAPECLMQSKFYIASDVW 213
Query: 707 SFGVLALEVI 716
SFGV E++
Sbjct: 214 SFGVTLHELL 223
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 103/223 (46%), Gaps = 18/223 (8%)
Query: 506 KDFDAKYCIGKGEHRSVYRA-KLPSGDKIAVKKFN----SPFPNDQMSDQKEF-LNEIKA 559
++++ K +G+G V R P+ + AVK + F +++ + +E L E+
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 560 LTKIR-HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGV 618
L K+ H NI++ F+V++ + +G L L+ + + RK M + V
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 123
Query: 619 ADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGY 678
AL ++ IVHRD+ N+LLD + +++DFG + L P E+ GT Y
Sbjct: 124 ICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG-EKLREVCGTPSY 176
Query: 679 VAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+AP ++ Y ++ D++S GV+ ++ G P
Sbjct: 177 LAPEIIECSMNDNHPGYGKEV----DMWSTGVIMYTLLAGSPP 215
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 90/213 (42%), Gaps = 19/213 (8%)
Query: 514 IGKGEHRSVYRAKL--PSGDKI--AVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
IG+G VY L G KI AVK N + + +FL E + H N++
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR---ITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 570 KFYGFCSHVRHS-FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHD 628
G C S VV Y+ G L + N + + + + VA + Y+
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKYLASK 171
Query: 629 CFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGL 688
F VHRD+++ N +LD ++ +V+DFG A+ + + + G P +
Sbjct: 172 KF---VHRDLAARNCMLDEKFTVKVADFGLARDM--YDKEYYSVHNKTGAKLP----VKW 222
Query: 689 HLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
E T K T K DV+SFGVL E++ P
Sbjct: 223 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 90/213 (42%), Gaps = 19/213 (8%)
Query: 514 IGKGEHRSVYRAKL--PSGDKI--AVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
IG+G VY L G KI AVK N + + +FL E + H N++
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR---ITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 570 KFYGFCSHVRHS-FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHD 628
G C S VV Y+ G L + N + + + + VA + Y+
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKYLASK 144
Query: 629 CFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGL 688
F VHRD+++ N +LD ++ +V+DFG A+ + + + G P +
Sbjct: 145 KF---VHRDLAARNCMLDEKFTVKVADFGLARDM--YDKEYYSVHNKTGAKLP----VKW 195
Query: 689 HLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
E T K T K DV+SFGVL E++ P
Sbjct: 196 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 90/213 (42%), Gaps = 19/213 (8%)
Query: 514 IGKGEHRSVYRAKL--PSGDKI--AVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
IG+G VY L G KI AVK N + + +FL E + H N++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR---ITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 570 KFYGFCSHVRHS-FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHD 628
G C S VV Y+ G L + N + + + + VA + Y+
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKYLASK 152
Query: 629 CFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGL 688
F VHRD+++ N +LD ++ +V+DFG A+ + + + G P +
Sbjct: 153 KF---VHRDLAARNCMLDEKFTVKVADFGLARDM--YDKEYYSVHNKTGAKLP----VKW 203
Query: 689 HLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
E T K T K DV+SFGVL E++ P
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 90/213 (42%), Gaps = 19/213 (8%)
Query: 514 IGKGEHRSVYRAKL--PSGDKI--AVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
IG+G VY L G KI AVK N + + +FL E + H N++
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR---ITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 570 KFYGFCSHVRHS-FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHD 628
G C S VV Y+ G L + N + + + + VA + Y+
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKYLASK 149
Query: 629 CFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGL 688
F VHRD+++ N +LD ++ +V+DFG A+ + + + G P +
Sbjct: 150 KF---VHRDLAARNCMLDEKFTVKVADFGLARDM--YDKEYYSVHNKTGAKLP----VKW 200
Query: 689 HLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
E T K T K DV+SFGVL E++ P
Sbjct: 201 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 28/214 (13%)
Query: 514 IGKGEHRSVYRAK-LPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+GKG V + K + + AVK N ++ D L E++ L K+ H NI+K +
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK--DTSTILREVELLKKLDHPNIMKLF 87
Query: 573 GFCSHVRHSFVVYEYINRGSL--ATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
++V E G L + F+ D +I V ++YMH
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHD-----AARIIKQVFSGITYMHK--- 139
Query: 631 PPIVHRDISSNNVLLD---LEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIG 687
IVHRD+ N+LL+ + + ++ DFG + + N+ + +GT Y+AP
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT-KMKDRIGTAYYIAP------ 192
Query: 688 LHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ Y EKCDV+S GV+ ++ G P
Sbjct: 193 -EVLRGTYD----EKCDVWSAGVILYILLSGTPP 221
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 103/223 (46%), Gaps = 18/223 (8%)
Query: 506 KDFDAKYCIGKGEHRSVYRA-KLPSGDKIAVKKFN----SPFPNDQMSDQKEF-LNEIKA 559
++++ K +G+G V R P+ + AVK + F +++ + +E L E+
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 560 LTKIR-HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGV 618
L K+ H NI++ F+V++ + +G L L+ + + RK M + V
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 136
Query: 619 ADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGY 678
AL ++ IVHRD+ N+LLD + +++DFG + L P E+ GT Y
Sbjct: 137 ICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG-EKLREVCGTPSY 189
Query: 679 VAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+AP ++ Y ++ D++S GV+ ++ G P
Sbjct: 190 LAPEIIECSMNDNHPGYGKEV----DMWSTGVIMYTLLAGSPP 228
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 90/213 (42%), Gaps = 19/213 (8%)
Query: 514 IGKGEHRSVYRAKL--PSGDKI--AVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
IG+G VY L G KI AVK N + + +FL E + H N++
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR---ITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 570 KFYGFCSHVRHS-FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHD 628
G C S VV Y+ G L + N + + + + VA + Y+
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKYLASK 151
Query: 629 CFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGL 688
F VHRD+++ N +LD ++ +V+DFG A+ + + + G P +
Sbjct: 152 KF---VHRDLAARNCMLDEKFTVKVADFGLARDM--YDKEYYSVHNKTGAKLP----VKW 202
Query: 689 HLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
E T K T K DV+SFGVL E++ P
Sbjct: 203 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 88/219 (40%), Gaps = 31/219 (14%)
Query: 514 IGKGEHRSVYRAKL--PSGDKI--AVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
IG+G VY L G KI AVK N + + +FL E + H N++
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR---ITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 570 KFYGFCSHVRHS-FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHD 628
G C S VV Y+ G L + N + + + + VA + Y+
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKYLASK 151
Query: 629 CFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGL 688
F VHRD+++ N +LD ++ +V+DFG A+ + H G
Sbjct: 152 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEX------------XSVHNKTGA 196
Query: 689 HLA------ELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
L E T K T K DV+SFGVL E++ P
Sbjct: 197 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 90/213 (42%), Gaps = 19/213 (8%)
Query: 514 IGKGEHRSVYRAKL--PSGDKI--AVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
IG+G VY L G KI AVK N + + +FL E + H N++
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR---ITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 570 KFYGFCSHVRHS-FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHD 628
G C S VV Y+ G L + N + + + + VA + Y+
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKYLASK 150
Query: 629 CFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGL 688
F VHRD+++ N +LD ++ +V+DFG A+ + + + G P +
Sbjct: 151 KF---VHRDLAARNCMLDEKFTVKVADFGLARDM--YDKEYYSVHNKTGAKLP----VKW 201
Query: 689 HLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
E T K T K DV+SFGVL E++ P
Sbjct: 202 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 96/220 (43%), Gaps = 27/220 (12%)
Query: 508 FDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHR 566
+ + +GKG V K +G + AVK S Q +D++ L E++ L ++ H
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVI-SKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 567 NIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
NI K Y F + ++V E G L + + F +I V ++Y H
Sbjct: 87 NIXKLYEFFEDKGYFYLVGEVYTGGEL---FDEIISRKRFSEVDAARIIRQVLSGITYXH 143
Query: 627 HDCFPPIVHRDISSNNVLLDLEYE---ARVSDFGTAKLLKPNSSNWTELVGTFGYVAPA- 682
+ IVHRD+ N+LL+ + + R+ DFG + + S + +GT Y+AP
Sbjct: 144 KN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKXKDKIGTAYYIAPEV 199
Query: 683 -HGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
HG EKCDV+S GV+ ++ G P
Sbjct: 200 LHGT-------------YDEKCDVWSTGVILYILLSGCPP 226
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 90/213 (42%), Gaps = 19/213 (8%)
Query: 514 IGKGEHRSVYRAKL--PSGDKI--AVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
IG+G VY L G KI AVK N + + +FL E + H N++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR---ITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 570 KFYGFCSHVRHS-FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHD 628
G C S VV Y+ G L + N + + + + VA + Y+
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKYLASK 152
Query: 629 CFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGL 688
F VHRD+++ N +LD ++ +V+DFG A+ + + + G P +
Sbjct: 153 KF---VHRDLAARNCMLDEKFTVKVADFGLARDM--YDKEYYSVHNKTGAKLP----VKW 203
Query: 689 HLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
E T K T K DV+SFGVL E++ P
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 90/213 (42%), Gaps = 19/213 (8%)
Query: 514 IGKGEHRSVYRAKL--PSGDKI--AVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
IG+G VY L G KI AVK N + + +FL E + H N++
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR---ITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 570 KFYGFCSHVRHS-FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHD 628
G C S VV Y+ G L + N + + + + VA + Y+
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKYLASK 147
Query: 629 CFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGL 688
F VHRD+++ N +LD ++ +V+DFG A+ + + + G P +
Sbjct: 148 KF---VHRDLAARNCMLDEKFTVKVADFGLARDM--YDKEYYSVHNKTGAKLP----VKW 198
Query: 689 HLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
E T K T K DV+SFGVL E++ P
Sbjct: 199 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 100/224 (44%), Gaps = 42/224 (18%)
Query: 514 IGKGEHRSVYRAKLPSGD---KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHR-NIV 569
IG+G V +A++ A+K+ D D ++F E++ L K+ H NI+
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD---DHRDFAGELEVLCKLGHHPNII 86
Query: 570 KFYGFCSHVRHSFVVYEYINRGSL--------------ATVLSNNFASEDFDWRKRMNVI 615
G C H + ++ EY G+L A ++N+ AS ++ ++
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST-LSSQQLLHFA 145
Query: 616 TGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGT 675
VA + Y+ F +HR++++ N+L+ Y A+++DFG ++ G
Sbjct: 146 ADVARGMDYLSQKQF---IHRNLAARNILVGENYVAKIADFGLSR-------------GQ 189
Query: 676 FGYVAPAHGNI---GLHLAELAYTMKITEKCDVYSFGVLALEVI 716
YV G + + + L Y++ T DV+S+GVL E++
Sbjct: 190 EVYVKKTMGRLPVRWMAIESLNYSV-YTTNSDVWSYGVLLWEIV 232
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 17/167 (10%)
Query: 555 NEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV 614
EI L++ I +++G +++ EY+ GS +L E + +
Sbjct: 66 QEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETY----IATI 121
Query: 615 ITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG 674
+ + L Y+H + +HRDI + NVLL + + +++DFG A L VG
Sbjct: 122 LREILKGLDYLHSER---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVG 178
Query: 675 TFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
T ++AP + + AY K D++S G+ A+E+ KG+ P
Sbjct: 179 TPFWMAPE------VIKQSAYDF----KADIWSLGITAIELAKGEPP 215
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 19/167 (11%)
Query: 555 NEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV 614
+E L+ + H I++ +G + F++ +YI G L ++L S+ F
Sbjct: 55 DERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK---SQRFPNPVAKFY 111
Query: 615 ITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG 674
V AL Y+H I++RD+ N+LLD +++DFG AK + P+ + L G
Sbjct: 112 AAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYV-PDVT--YXLCG 165
Query: 675 TFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
T Y+AP E+ T + D +SFG+L E++ G P
Sbjct: 166 TPDYIAP----------EVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 86/197 (43%), Gaps = 24/197 (12%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIR----HRNIVKFYGFCSHVRHSFVVYEY 587
K KK N F +S + E N K +T ++ H NIVK + H+F+V E
Sbjct: 29 KCVHKKSNQAFAVKIISKRME-ANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMEL 87
Query: 588 INRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDL 647
+N G L + + F + ++ + A+S+MH +VHRD+ N+L
Sbjct: 88 LNGGELFERIKKK---KHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTD 141
Query: 648 E---YEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCD 704
E E ++ DFG A+L P++ T Y AP EL E CD
Sbjct: 142 ENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAP----------ELLNQNGYDESCD 191
Query: 705 VYSFGVLALEVIKGKHP 721
++S GV+ ++ G+ P
Sbjct: 192 LWSLGVILYTMLSGQVP 208
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 29/219 (13%)
Query: 513 CIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
C+GKG + V+R L G+ +AVK F+S D+ S +E EI +RH NI+ F
Sbjct: 15 CVGKGRYGEVWRG-LWHGESVAVKIFSS---RDEQSWFRE--TEIYNTVLLRHDNILGFI 68
Query: 573 GFCSHVRHS----FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHD 628
R+S +++ Y GSL L R ++ G L+++H +
Sbjct: 69 ASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACG----LAHLHVE 124
Query: 629 CF-----PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTEL-----VGTFGY 678
F P I HRD S NVL+ + ++D G A ++ S++ ++ VGT Y
Sbjct: 125 IFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA-VMHSQGSDYLDIGNNPRVGTKRY 183
Query: 679 VAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK 717
+AP + + + + K T D+++FG++ E+ +
Sbjct: 184 MAPEVLDEQIR-TDCFESYKWT---DIWAFGLVLWEIAR 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 32/216 (14%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKE---FLNEIKALTKIRHRNIVK 570
+GKG V + K D+I +++ N + K+ L E++ L K+ H NI+K
Sbjct: 30 LGKGSFGEVLKCK----DRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMK 85
Query: 571 FYGFCSHVRHSFVVYEYINRGSL--ATVLSNNFASEDFDWRKRMNVITGVADALSYMHHD 628
+ ++V E G L + F+ D +I V ++YMH
Sbjct: 86 LFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHD-----AARIIKQVFSGITYMHKH 140
Query: 629 CFPPIVHRDISSNNVLLD---LEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
IVHRD+ N+LL+ + + ++ DFG + + N+ + +GT Y+AP
Sbjct: 141 ---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT-KMKDRIGTAYYIAP---- 192
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ Y EKCDV+S GV+ ++ G P
Sbjct: 193 ---EVLRGTYD----EKCDVWSAGVILYILLSGTPP 221
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 32/216 (14%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKE---FLNEIKALTKIRHRNIVK 570
+GKG V + K D+I +++ N + K+ L E++ L K+ H NI+K
Sbjct: 30 LGKGSFGEVLKCK----DRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMK 85
Query: 571 FYGFCSHVRHSFVVYEYINRGSL--ATVLSNNFASEDFDWRKRMNVITGVADALSYMHHD 628
+ ++V E G L + F+ D +I V ++YMH
Sbjct: 86 LFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHD-----AARIIKQVFSGITYMHKH 140
Query: 629 CFPPIVHRDISSNNVLLD---LEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
IVHRD+ N+LL+ + + ++ DFG + + N+ + +GT Y+AP
Sbjct: 141 ---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT-KMKDRIGTAYYIAP---- 192
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ Y EKCDV+S GV+ ++ G P
Sbjct: 193 ---EVLRGTYD----EKCDVWSAGVILYILLSGTPP 221
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 25/224 (11%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
+DF+ IG+G V KL + DK+ K + + + ++ F E L
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS 133
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLS--NNFASEDFDWRKRMNVITGVADALS 623
+ I + + ++V +Y G L T+LS + E+ R + + D++
Sbjct: 134 KWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMA-RFYLAEMVIAIDSVH 192
Query: 624 YMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTA-KLLKPNSSNWTELVGTFGYVAPA 682
+H+ VHRDI +N+L+D+ R++DFG+ KL++ + + VGT Y++P
Sbjct: 193 QLHY------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPE 246
Query: 683 -----HGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
G G + E CD +S GV E++ G+ P
Sbjct: 247 ILQAMEGGKGRYGPE----------CDWWSLGVCMYEMLYGETP 280
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 21/213 (9%)
Query: 513 CIGKGEHRSVYRAK-LPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKF 571
IGKG V A+ + +G ++AV+ + N S ++ E++ + + H NIVK
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNS--SSLQKLFREVRIMKVLNHPNIVKL 78
Query: 572 YGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFP 631
+ + ++V EY + G + L + ++ + R + I A+ Y H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS---AVQYCHQKF-- 133
Query: 632 PIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLA 691
IVHRD+ + N+LLD + +++DFG + + E G+ Y AP
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDEFCGSPPYAAP---------- 181
Query: 692 ELAYTMKIT-EKCDVYSFGVLALEVIKGKHPGD 723
EL K + DV+S GV+ ++ G P D
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 21/174 (12%)
Query: 551 KEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRK 610
+E NEI L + H NI+K + ++ ++V E+ G L + N FD
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK---FDECD 147
Query: 611 RMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLE---YEARVSDFGTAKLLKPNSS 667
N++ + + Y+H IVHRDI N+LL+ + ++ DFG + +
Sbjct: 148 AANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK 204
Query: 668 NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ +GT Y+AP K EKCDV+S GV+ ++ G P
Sbjct: 205 -LRDRLGTAYYIAPE-----------VLKKKYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 93/225 (41%), Gaps = 21/225 (9%)
Query: 500 EIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKI-AVKKFNSPFPNDQMSDQKEFLNEIK 558
+I + +DF+ +GKG V+ A+ ++ A+K M D E K
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVV--LMDDDVECTMVEK 69
Query: 559 ALTKIRHRNIVKFYGFCSHVRHS--FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVIT 616
+ + + + FC+ F V EY+N G L + + FD +
Sbjct: 70 RVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQ---SCHKFDLSRATFYAA 126
Query: 617 GVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTF 676
+ L ++H IV+RD+ +N+LLD + +++DFG K + E GT
Sbjct: 127 EIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTP 183
Query: 677 GYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
Y+AP E+ K D +SFGVL E++ G+ P
Sbjct: 184 DYIAP----------EILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 90/213 (42%), Gaps = 19/213 (8%)
Query: 514 IGKGEHRSVYRAKL--PSGDKI--AVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
IG+G VY L G KI AVK N + + +FL E + H N++
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR---ITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 570 KFYGFCSHVRHS-FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHD 628
G C S VV Y+ G L + N + + + + VA + ++
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLASK 211
Query: 629 CFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGL 688
F VHRD+++ N +LD ++ +V+DFG A+ + + + G P +
Sbjct: 212 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMY--DKEFDSVHNKTGAKLP----VKW 262
Query: 689 HLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
E T K T K DV+SFGVL E++ P
Sbjct: 263 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 104/230 (45%), Gaps = 25/230 (10%)
Query: 500 EIIRRTKDFDAKYCI----GKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLN 555
E +RR D + + I G G VY+AK +A K +++ D ++
Sbjct: 1 EHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELED---YIV 57
Query: 556 EIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVI 615
EI+ L H IVK G H +++ E+ G++ ++ + V
Sbjct: 58 EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLE--LDRGLTEPQIQVVC 115
Query: 616 TGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFG-TAKLLKPNSSNWTELVG 674
+ +AL+++H I+HRD+ + NVL+ LE + R++DFG +AK LK +G
Sbjct: 116 RQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR-DSFIG 171
Query: 675 TFGYVAPAHGNIGLHLAELAYTMKITE---KCDVYSFGVLALEVIKGKHP 721
T ++AP + TMK T K D++S G+ +E+ + + P
Sbjct: 172 TPYWMAPE--------VVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 213
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 91/219 (41%), Gaps = 31/219 (14%)
Query: 514 IGKGEHRSVYRAKL--PSGDKI--AVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
IG+G VY L G KI AVK N + + +FL E + H N++
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 570 KFYGFCSHVRHS-FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHD 628
G C S VV Y+ G L + N + + + + VA + ++
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLASK 153
Query: 629 CFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGL 688
F VHRD+++ N +LD ++ +V+DFG A+ + L F V H G
Sbjct: 154 KF---VHRDLAARNCMLDEKFTVKVADFGLARDM---------LDKEFDSV---HNKTGA 198
Query: 689 HLA------ELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
L E T K T K DV+SFGVL E++ P
Sbjct: 199 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 84/175 (48%), Gaps = 20/175 (11%)
Query: 551 KEFLNEIKALTKIRHRNIVKFYGFCS--HVRHSFVVYEYINRGSLATVLSNNFASEDFDW 608
++ EI L K+ H N+VK + H ++V+E +N+G + V + SED
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQAR 140
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
++I G+ Y+H + I+HRDI +N+L+ + +++DFG + K + +
Sbjct: 141 FYFQDLIKGI----EYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL 193
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKI--TEKCDVYSFGVLALEVIKGKHP 721
+ VGT ++AP L+ T KI + DV++ GV + G+ P
Sbjct: 194 LSNTVGTPAFMAP---------ESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 89/219 (40%), Gaps = 31/219 (14%)
Query: 514 IGKGEHRSVYRAKL--PSGDKI--AVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
IG+G VY L G KI AVK N + + +FL E + H N++
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 570 KFYGFCSHVRHS-FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHD 628
G C S VV Y+ G L + N + + + + VA + ++
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLASK 153
Query: 629 CFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGL 688
F VHRD+++ N +LD ++ +V+DFG A+ + + H G
Sbjct: 154 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD------------SVHNKTGA 198
Query: 689 HLA------ELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
L E T K T K DV+SFGVL E++ P
Sbjct: 199 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 90/213 (42%), Gaps = 19/213 (8%)
Query: 514 IGKGEHRSVYRAKL--PSGDKI--AVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
IG+G VY L G KI AVK N + + +FL E + H N++
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 570 KFYGFCSHVRHS-FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHD 628
G C S VV Y+ G L + N + + + + VA + ++
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLASK 157
Query: 629 CFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGL 688
F VHRD+++ N +LD ++ +V+DFG A+ + + + G P +
Sbjct: 158 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMY--DKEFDSVHNKTGAKLP----VKW 208
Query: 689 HLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
E T K T K DV+SFGVL E++ P
Sbjct: 209 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 89/219 (40%), Gaps = 31/219 (14%)
Query: 514 IGKGEHRSVYRAKL--PSGDKI--AVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
IG+G VY L G KI AVK N + + +FL E + H N++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR---ITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 570 KFYGFCSHVRHS-FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHD 628
G C S VV Y+ G L + N + + + + VA + ++
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLASK 152
Query: 629 CFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGL 688
F VHRD+++ N +LD ++ +V+DFG A+ + + H G
Sbjct: 153 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD------------SVHNKTGA 197
Query: 689 HLA------ELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
L E T K T K DV+SFGVL E++ P
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 112/279 (40%), Gaps = 40/279 (14%)
Query: 514 IGKGEHRSVYRAK-LPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
IG+G+ VYRA L G +A+KK F + + + EI L ++ H N++K+Y
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQI-FDLMDAKARADCIKEIDLLKQLNHPNVIKYY 98
Query: 573 GFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRM-------NVITGVADALSYM 625
+V E + G L+ ++ + F +KR+ + AL +M
Sbjct: 99 ASFIEDNELNIVLELADAGDLSRMIKH------FKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
H ++HRDI NV + ++ D G + ++ LVGT Y++P
Sbjct: 153 HSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE--- 206
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP--GDXXXXXXXXXXXINIEFNAML 743
+ E Y K D++S G L E+ + P GD ++
Sbjct: 207 ---RIHENGYNF----KSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYP--- 256
Query: 744 DHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTV 782
P PS E+L ++ +C++ P RP + V
Sbjct: 257 ----PLPSDHYSEELRQLVN---MCINPDPEKRPDVTYV 288
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 104/230 (45%), Gaps = 25/230 (10%)
Query: 500 EIIRRTKDFDAKYCI----GKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLN 555
E +RR D + + I G G VY+AK +A K +++ D ++
Sbjct: 9 EHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELED---YIV 65
Query: 556 EIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVI 615
EI+ L H IVK G H +++ E+ G++ ++ + V
Sbjct: 66 EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLE--LDRGLTEPQIQVVC 123
Query: 616 TGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFG-TAKLLKPNSSNWTELVG 674
+ +AL+++H I+HRD+ + NVL+ LE + R++DFG +AK LK +G
Sbjct: 124 RQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR-DSFIG 179
Query: 675 TFGYVAPAHGNIGLHLAELAYTMKITE---KCDVYSFGVLALEVIKGKHP 721
T ++AP + TMK T K D++S G+ +E+ + + P
Sbjct: 180 TPYWMAPE--------VVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 221
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 89/219 (40%), Gaps = 31/219 (14%)
Query: 514 IGKGEHRSVYRAKL--PSGDKI--AVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
IG+G VY L G KI AVK N + + +FL E + H N++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 570 KFYGFCSHVRHS-FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHD 628
G C S VV Y+ G L + N + + + + VA + ++
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLASK 152
Query: 629 CFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGL 688
F VHRD+++ N +LD ++ +V+DFG A+ + + H G
Sbjct: 153 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD------------SVHNKTGA 197
Query: 689 HLA------ELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
L E T K T K DV+SFGVL E++ P
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 101/226 (44%), Gaps = 15/226 (6%)
Query: 498 YEEIIRRTKDFDAKYCIGK-GEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNE 556
YE + R D IG+ G+ VY+A+ +A K +++ D ++ E
Sbjct: 1 YEHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELED---YMVE 57
Query: 557 IKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVIT 616
I L H NIVK + + +++ E+ G++ V+ + V
Sbjct: 58 IDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPLTESQIQVVCK 115
Query: 617 GVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFG-TAKLLKPNSSNWTELVGT 675
DAL+Y+H + I+HRD+ + N+L L+ + +++DFG +AK + +GT
Sbjct: 116 QTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGT 172
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
++AP + + E + K DV+S G+ +E+ + + P
Sbjct: 173 PYWMAPE-----VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 18/223 (8%)
Query: 506 KDFDAKYCIGKGEHRSVYRA-KLPSGDKIAVKKFN----SPFPNDQMSDQKEF-LNEIKA 559
++++ K +G+G V R P+ + AVK + F +++ + +E L E+
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 560 LTKIR-HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGV 618
L K+ H NI++ F+V++ + +G L L+ + + RK M + V
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 136
Query: 619 ADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGY 678
AL ++ IVHRD+ N+LLD + +++DFG + L P + GT Y
Sbjct: 137 ICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG-EKLRSVCGTPSY 189
Query: 679 VAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+AP ++ Y ++ D++S GV+ ++ G P
Sbjct: 190 LAPEIIECSMNDNHPGYGKEV----DMWSTGVIMYTLLAGSPP 228
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 93/207 (44%), Gaps = 19/207 (9%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
+G+G + VY+AK G +A+K+ ++ + + EI L ++ H NIV
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTA--IREISLLKELHHPNIVSLID 86
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRM-NVITGVADALSYMHHDCFPP 632
R +V+E++ + + N +D + + ++ GVA + H
Sbjct: 87 VIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHC--HQHR----- 139
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
I+HRD+ N+L++ + +++DFG A+ ++T V T Y AP
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAP---------DV 190
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGK 719
L + K + D++S G + E+I GK
Sbjct: 191 LMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 102/233 (43%), Gaps = 25/233 (10%)
Query: 497 MYEEIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNE 556
+ +E+ +DF+ IG+G V K+ + ++I K + + + ++ F E
Sbjct: 81 LVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREE 140
Query: 557 IKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLS--NNFASEDFDWRKRMNV 614
L + I + H ++V +Y G L T+LS + ED R +
Sbjct: 141 RDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMA-RFYIGE 199
Query: 615 ITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTA-KLLKPNSSNWTELV 673
+ D++ +H+ VHRDI +NVLLD+ R++DFG+ K+ + + V
Sbjct: 200 MVLAIDSIHQLHY------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV 253
Query: 674 GTFGYVAPAHGNIGLHLAELAYTM-----KITEKCDVYSFGVLALEVIKGKHP 721
GT Y++P E+ M K +CD +S GV E++ G+ P
Sbjct: 254 GTPDYISP----------EILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 25/229 (10%)
Query: 498 YEEIIRRTKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNE 556
Y+E++ K ++ IG G V A + +G+ +A+K + N SD E
Sbjct: 5 YDELL---KYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDK---NTLGSDLPRIKTE 58
Query: 557 IKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSL-ATVLSNNFASEDFDWRKRMNVI 615
I+AL +RH++I + Y F+V EY G L ++S + SE+ + V
Sbjct: 59 IEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEE----ETRVVF 114
Query: 616 TGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSS-NWTELVG 674
+ A++Y+H + HRD+ N+L D ++ ++ DFG K N + G
Sbjct: 115 RQIVSAVAYVHSQGY---AHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCG 171
Query: 675 TFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGD 723
+ Y AP +L A DV+S G+L ++ G P D
Sbjct: 172 SLAYAAPELIQGKSYLGSEA---------DVWSMGILLYVLMCGFLPFD 211
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 102/233 (43%), Gaps = 25/233 (10%)
Query: 497 MYEEIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNE 556
+ +E+ +DF+ IG+G V K+ + ++I K + + + ++ F E
Sbjct: 65 LVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREE 124
Query: 557 IKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLS--NNFASEDFDWRKRMNV 614
L + I + H ++V +Y G L T+LS + ED R +
Sbjct: 125 RDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMA-RFYIGE 183
Query: 615 ITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTA-KLLKPNSSNWTELV 673
+ D++ +H+ VHRDI +NVLLD+ R++DFG+ K+ + + V
Sbjct: 184 MVLAIDSIHQLHY------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV 237
Query: 674 GTFGYVAPAHGNIGLHLAELAYTM-----KITEKCDVYSFGVLALEVIKGKHP 721
GT Y++P E+ M K +CD +S GV E++ G+ P
Sbjct: 238 GTPDYISP----------EILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 29/217 (13%)
Query: 513 CIGKGEHRSVYRAK-LPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKF 571
IGKG V A+ + +G ++AVK + N S ++ E++ + + H NIVK
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNS--SSLQKLFREVRIMKVLNHPNIVKL 78
Query: 572 YGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFP 631
+ + ++V EY + G + L + ++ + R + I A+ Y H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS---AVQYCHQKF-- 133
Query: 632 PIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTF----GYVAPAHGNIG 687
IVHRD+ + N+LLD + +++DFG + N + + TF Y AP
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFS-----NEFTFGNKLDTFCGSPPYAAP------ 181
Query: 688 LHLAELAYTMKIT-EKCDVYSFGVLALEVIKGKHPGD 723
EL K + DV+S GV+ ++ G P D
Sbjct: 182 ----ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 89/219 (40%), Gaps = 31/219 (14%)
Query: 514 IGKGEHRSVYRAKL--PSGDKI--AVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
IG+G VY L G KI AVK N + + +FL E + H N++
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 570 KFYGFCSHVRHS-FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHD 628
G C S VV Y+ G L + N + + + + VA + ++
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLASK 150
Query: 629 CFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGL 688
F VHRD+++ N +LD ++ +V+DFG A+ + + H G
Sbjct: 151 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD------------SVHNKTGA 195
Query: 689 HLA------ELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
L E T K T K DV+SFGVL E++ P
Sbjct: 196 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 93/207 (44%), Gaps = 19/207 (9%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
+G+G + VY+AK G +A+K+ ++ + + EI L ++ H NIV
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTA--IREISLLKELHHPNIVSLID 86
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRM-NVITGVADALSYMHHDCFPP 632
R +V+E++ + + N +D + + ++ GVA + H
Sbjct: 87 VIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHC--HQHR----- 139
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
I+HRD+ N+L++ + +++DFG A+ ++T V T Y AP
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAP---------DV 190
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGK 719
L + K + D++S G + E+I GK
Sbjct: 191 LMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 25/224 (11%)
Query: 505 TKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
+D+D +G+G + V A + + +AVK + D + K+ EI +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIXINKML 62
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMN-VITGVADAL 622
H N+VKFYG ++ EY + G L + + + D ++ + ++ GV
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 119
Query: 623 SYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN--WTELVGTFGYVA 680
Y+H I HRDI N+LLD ++SDFG A + + N+ ++ GT YVA
Sbjct: 120 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 175
Query: 681 PAHGNIGLHLAELAYTMKI-TEKCDVYSFGVLALEVIKGKHPGD 723
P EL + E DV+S G++ ++ G+ P D
Sbjct: 176 P----------ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 29/217 (13%)
Query: 513 CIGKGEHRSVYRAK-LPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKF 571
IGKG V A+ + +G ++AVK + N S ++ E++ + + H NIVK
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNS--SSLQKLFREVRIMKVLNHPNIVKL 78
Query: 572 YGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFP 631
+ + ++V EY + G + L + ++ + R + I A+ Y H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS---AVQYCHQKF-- 133
Query: 632 PIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTF----GYVAPAHGNIG 687
IVHRD+ + N+LLD + +++DFG + N + + TF Y AP
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFS-----NEFTFGNKLDTFCGSPPYAAP------ 181
Query: 688 LHLAELAYTMKIT-EKCDVYSFGVLALEVIKGKHPGD 723
EL K + DV+S GV+ ++ G P D
Sbjct: 182 ----ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 25/224 (11%)
Query: 505 TKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
+D+D +G+G + V A + + +AVK + D + K+ EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIXINKML 61
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMN-VITGVADAL 622
H N+VKFYG ++ EY + G L + + + D ++ + ++ GV
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 118
Query: 623 SYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN--WTELVGTFGYVA 680
Y+H I HRDI N+LLD ++SDFG A + + N+ ++ GT YVA
Sbjct: 119 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 681 PAHGNIGLHLAELAYTMKI-TEKCDVYSFGVLALEVIKGKHPGD 723
P EL + E DV+S G++ ++ G+ P D
Sbjct: 175 P----------ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 25/224 (11%)
Query: 505 TKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
+D+D +G+G + V A + + +AVK + D + K+ EI +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINAML 62
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMN-VITGVADAL 622
H N+VKFYG ++ EY + G L + + + D ++ + ++ GV
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 119
Query: 623 SYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN--WTELVGTFGYVA 680
Y+H I HRDI N+LLD ++SDFG A + + N+ ++ GT YVA
Sbjct: 120 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 681 PAHGNIGLHLAELAYTMKI-TEKCDVYSFGVLALEVIKGKHPGD 723
P EL + E DV+S G++ ++ G+ P D
Sbjct: 176 P----------ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 29/217 (13%)
Query: 513 CIGKGEHRSVYRAK-LPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKF 571
IGKG V A+ + +G ++AVK + N S ++ E++ + + H NIVK
Sbjct: 14 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNS--SSLQKLFREVRIMKVLNHPNIVKL 71
Query: 572 YGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFP 631
+ + ++V EY + G + L + ++ + R + I A+ Y H
Sbjct: 72 FEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVS---AVQYCHQKF-- 126
Query: 632 PIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTF----GYVAPAHGNIG 687
IVHRD+ + N+LLD + +++DFG + N + + TF Y AP
Sbjct: 127 -IVHRDLKAENLLLDADMNIKIADFGFS-----NEFTFGNKLDTFCGSPPYAAP------ 174
Query: 688 LHLAELAYTMKIT-EKCDVYSFGVLALEVIKGKHPGD 723
EL K + DV+S GV+ ++ G P D
Sbjct: 175 ----ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 25/224 (11%)
Query: 505 TKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
+D+D +G+G + V A + + +AVK + D + K+ EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIXINKML 61
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMN-VITGVADAL 622
H N+VKFYG ++ EY + G L + + + D ++ + ++ GV
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 118
Query: 623 SYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN--WTELVGTFGYVA 680
Y+H I HRDI N+LLD ++SDFG A + + N+ ++ GT YVA
Sbjct: 119 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 681 PAHGNIGLHLAELAYTMKI-TEKCDVYSFGVLALEVIKGKHPGD 723
P EL + E DV+S G++ ++ G+ P D
Sbjct: 175 P----------ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 21/213 (9%)
Query: 513 CIGKGEHRSVYRAK-LPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKF 571
IGKG V A+ + +G ++AVK + N S ++ E++ + + H NIVK
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNS--SSLQKLFREVRIMKVLNHPNIVKL 78
Query: 572 YGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFP 631
+ + ++V EY + G + L + ++ + R + I A+ Y H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS---AVQYCHQKF-- 133
Query: 632 PIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLA 691
IVHRD+ + N+LLD + +++DFG + + G Y AP
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDAFCGAPPYAAP---------- 181
Query: 692 ELAYTMKIT-EKCDVYSFGVLALEVIKGKHPGD 723
EL K + DV+S GV+ ++ G P D
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 25/224 (11%)
Query: 505 TKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
+D+D +G+G + V A + + +AVK + D + K+ EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKML 61
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMN-VITGVADAL 622
H N+VKFYG ++ EY + G L + + + D ++ + ++ GV
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 118
Query: 623 SYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN--WTELVGTFGYVA 680
Y+H I HRDI N+LLD ++SDFG A + + N+ ++ GT YVA
Sbjct: 119 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 681 PAHGNIGLHLAELAYTMKI-TEKCDVYSFGVLALEVIKGKHPGD 723
P EL + E DV+S G++ ++ G+ P D
Sbjct: 175 P----------ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 98/223 (43%), Gaps = 23/223 (10%)
Query: 505 TKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
+D+D +G+G + V A + + +AVK + D + K+ EI +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKML 62
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALS 623
H N+VKFYG ++ EY + G L + + + D ++ + + +
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVV 119
Query: 624 YMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN--WTELVGTFGYVAP 681
Y+H I HRDI N+LLD ++SDFG A + + N+ ++ GT YVAP
Sbjct: 120 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 682 AHGNIGLHLAELAYTMKI-TEKCDVYSFGVLALEVIKGKHPGD 723
EL + E DV+S G++ ++ G+ P D
Sbjct: 177 ----------ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 25/224 (11%)
Query: 505 TKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
+D+D +G+G + V A + + +AVK + D + K+ EI +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKML 62
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMN-VITGVADAL 622
H N+VKFYG ++ EY + G L + + + D ++ + ++ GV
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 119
Query: 623 SYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN--WTELVGTFGYVA 680
Y+H I HRDI N+LLD ++SDFG A + + N+ ++ GT YVA
Sbjct: 120 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 681 PAHGNIGLHLAELAYTMKI-TEKCDVYSFGVLALEVIKGKHPGD 723
P EL + E DV+S G++ ++ G+ P D
Sbjct: 176 P----------ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 25/224 (11%)
Query: 505 TKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
+D+D +G+G + V A + + +AVK + D + K+ EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKML 61
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMN-VITGVADAL 622
H N+VKFYG ++ EY + G L + + + D ++ + ++ GV
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 118
Query: 623 SYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN--WTELVGTFGYVA 680
Y+H I HRDI N+LLD ++SDFG A + + N+ ++ GT YVA
Sbjct: 119 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 681 PAHGNIGLHLAELAYTMKI-TEKCDVYSFGVLALEVIKGKHPGD 723
P EL + E DV+S G++ ++ G+ P D
Sbjct: 175 P----------ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 98/223 (43%), Gaps = 23/223 (10%)
Query: 505 TKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
+D+D +G+G + V A + + +AVK + D + K+ EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKML 61
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALS 623
H N+VKFYG ++ EY + G L + + + D ++ + + +
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVV 118
Query: 624 YMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN--WTELVGTFGYVAP 681
Y+H I HRDI N+LLD ++SDFG A + + N+ ++ GT YVAP
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 682 AHGNIGLHLAELAYTMKI-TEKCDVYSFGVLALEVIKGKHPGD 723
EL + E DV+S G++ ++ G+ P D
Sbjct: 176 ----------ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 25/224 (11%)
Query: 505 TKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
+D+D +G+G + V A + + +AVK + D + K+ EI +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKML 62
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMN-VITGVADAL 622
H N+VKFYG ++ EY + G L + + + D ++ + ++ GV
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 119
Query: 623 SYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN--WTELVGTFGYVA 680
Y+H I HRDI N+LLD ++SDFG A + + N+ ++ GT YVA
Sbjct: 120 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 681 PAHGNIGLHLAELAYTMKI-TEKCDVYSFGVLALEVIKGKHPGD 723
P EL + E DV+S G++ ++ G+ P D
Sbjct: 176 P----------ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 25/224 (11%)
Query: 505 TKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
+D+D +G+G + V A + + +AVK + D + K+ EI +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKML 62
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMN-VITGVADAL 622
H N+VKFYG ++ EY + G L + + + D ++ + ++ GV
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 119
Query: 623 SYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN--WTELVGTFGYVA 680
Y+H I HRDI N+LLD ++SDFG A + + N+ ++ GT YVA
Sbjct: 120 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 681 PAHGNIGLHLAELAYTMKI-TEKCDVYSFGVLALEVIKGKHPGD 723
P EL + E DV+S G++ ++ G+ P D
Sbjct: 176 P----------ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 25/224 (11%)
Query: 505 TKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
+D+D +G+G + V A + + +AVK + D + K+ EI +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKML 62
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMN-VITGVADAL 622
H N+VKFYG ++ EY + G L + + + D ++ + ++ GV
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 119
Query: 623 SYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN--WTELVGTFGYVA 680
Y+H I HRDI N+LLD ++SDFG A + + N+ ++ GT YVA
Sbjct: 120 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 681 PAHGNIGLHLAELAYTMKI-TEKCDVYSFGVLALEVIKGKHPGD 723
P EL + E DV+S G++ ++ G+ P D
Sbjct: 176 P----------ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 25/211 (11%)
Query: 514 IGKGEHRSVYRAKL-PSGDK----IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNI 568
+GKG SV + P GD +AVK+ P+ Q ++F EI+ L + I
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ----RDFQREIQILKALHSDFI 74
Query: 569 VKFYGFC-SHVRHSF-VVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM- 625
VK+ G R S +V EY+ G L L + A D + + + + + Y+
Sbjct: 75 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR--LDASRLLLYSSQICKGMEYLG 132
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
C VHRD+++ N+L++ E +++DFG AKLL + + P
Sbjct: 133 SRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV-------VREPGQSP 181
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVI 716
I + E + + DV+SFGV+ E+
Sbjct: 182 IFWYAPESLSDNIFSRQSDVWSFGVVLYELF 212
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 25/224 (11%)
Query: 505 TKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
+D+D +G+G + V A + + +AVK + D + K+ EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKML 61
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMN-VITGVADAL 622
H N+VKFYG ++ EY + G L + + + D ++ + ++ GV
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 118
Query: 623 SYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN--WTELVGTFGYVA 680
Y+H I HRDI N+LLD ++SDFG A + + N+ ++ GT YVA
Sbjct: 119 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 681 PAHGNIGLHLAELAYTMKI-TEKCDVYSFGVLALEVIKGKHPGD 723
P EL + E DV+S G++ ++ G+ P D
Sbjct: 175 P----------ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 25/224 (11%)
Query: 505 TKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
+D+D +G+G + V A + + +AVK + D + K+ EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKML 61
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMN-VITGVADAL 622
H N+VKFYG ++ EY + G L + + + D ++ + ++ GV
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 118
Query: 623 SYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN--WTELVGTFGYVA 680
Y+H I HRDI N+LLD ++SDFG A + + N+ ++ GT YVA
Sbjct: 119 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 681 PAHGNIGLHLAELAYTMKI-TEKCDVYSFGVLALEVIKGKHPGD 723
P EL + E DV+S G++ ++ G+ P D
Sbjct: 175 P----------ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 112/285 (39%), Gaps = 37/285 (12%)
Query: 514 IGKGEHRSVYRAKL-PSGDK----IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNI 568
+GKG SV + P GD +AVK+ P+ Q ++F EI+ L + I
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ----RDFQREIQILKALHSDFI 73
Query: 569 VKFYGFC-SHVRHSF-VVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM- 625
VK+ G R S +V EY+ G L L + A D + + + + + Y+
Sbjct: 74 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR--LDASRLLLYSSQICKGMEYLG 131
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
C VHRD+++ N+L++ E +++DFG AKLL + + P
Sbjct: 132 SRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV-------VREPGQSP 180
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVI----KGKHPGDXXXXXXXXXXXI----NI 737
I + E + + DV+SFGV+ E+ K P + +
Sbjct: 181 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDVPALSRL 240
Query: 738 EFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTV 782
RLP P E + E+ LC P RP+ +
Sbjct: 241 LELLEEGQRLPAPPACPAE----VHELMKLCWAPSPQDRPSFSAL 281
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 25/211 (11%)
Query: 514 IGKGEHRSVYRAKL-PSGDK----IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNI 568
+GKG SV + P GD +AVK+ P+ Q ++F EI+ L + I
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ----RDFQREIQILKALHSDFI 86
Query: 569 VKFYGFC-SHVRHSF-VVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM- 625
VK+ G R S +V EY+ G L L + A D + + + + + Y+
Sbjct: 87 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR--LDASRLLLYSSQICKGMEYLG 144
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
C VHRD+++ N+L++ E +++DFG AKLL + + P
Sbjct: 145 SRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV-------VREPGQSP 193
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVI 716
I + E + + DV+SFGV+ E+
Sbjct: 194 IFWYAPESLSDNIFSRQSDVWSFGVVLYELF 224
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 25/224 (11%)
Query: 505 TKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
+D+D +G+G + V A + + +AVK + D + K+ EI +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKML 62
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMN-VITGVADAL 622
H N+VKFYG ++ EY + G L + + + D ++ + ++ GV
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 119
Query: 623 SYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN--WTELVGTFGYVA 680
Y+H I HRDI N+LLD ++SDFG A + + N+ ++ GT YVA
Sbjct: 120 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 681 PAHGNIGLHLAELAYTMKI-TEKCDVYSFGVLALEVIKGKHPGD 723
P EL + E DV+S G++ ++ G+ P D
Sbjct: 176 P----------ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 25/224 (11%)
Query: 505 TKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
+D+D +G+G + V A + + +AVK + D + K+ EI +
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKML 60
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMN-VITGVADAL 622
H N+VKFYG ++ EY + G L + + + D ++ + ++ GV
Sbjct: 61 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 117
Query: 623 SYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN--WTELVGTFGYVA 680
Y+H I HRDI N+LLD ++SDFG A + + N+ ++ GT YVA
Sbjct: 118 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 173
Query: 681 PAHGNIGLHLAELAYTMKI-TEKCDVYSFGVLALEVIKGKHPGD 723
P EL + E DV+S G++ ++ G+ P D
Sbjct: 174 P----------ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 25/224 (11%)
Query: 505 TKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
+D+D +G+G + V A + + +AVK + D + K+ EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKML 61
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMN-VITGVADAL 622
H N+VKFYG ++ EY + G L + + + D ++ + ++ GV
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 118
Query: 623 SYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN--WTELVGTFGYVA 680
Y+H I HRDI N+LLD ++SDFG A + + N+ ++ GT YVA
Sbjct: 119 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 681 PAHGNIGLHLAELAYTMKI-TEKCDVYSFGVLALEVIKGKHPGD 723
P EL + E DV+S G++ ++ G+ P D
Sbjct: 175 P----------ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 85/193 (44%), Gaps = 25/193 (12%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRG 591
++A+K N M ++ EFLNE + + ++V+ G S + + V+ E + RG
Sbjct: 42 RVAIKTVNEA---ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 98
Query: 592 SLATVL-------SNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVL 644
L + L NN K + + +AD ++Y++ + F VHRD+++ N +
Sbjct: 99 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCM 155
Query: 645 LDLEYEARVSDFGTAKLLKPNSSNWTELVGTFG--YVAPAHGNIGLHLAELAYTMKITEK 702
+ ++ ++ DFG + + G +++P G+ T
Sbjct: 156 VAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGV----------FTTY 205
Query: 703 CDVYSFGVLALEV 715
DV+SFGV+ E+
Sbjct: 206 SDVWSFGVVLWEI 218
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 29/217 (13%)
Query: 513 CIGKGEHRSVYRAK-LPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKF 571
IGKG V A+ + +G ++AV+ + N S ++ E++ + + H NIVK
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNS--SSLQKLFREVRIMKVLNHPNIVKL 78
Query: 572 YGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFP 631
+ + ++V EY + G + L + ++ + R + I A+ Y H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS---AVQYCHQKF-- 133
Query: 632 PIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTF----GYVAPAHGNIG 687
IVHRD+ + N+LLD + +++DFG + N + + TF Y AP
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFS-----NEFTFGNKLDTFCGSPPYAAP------ 181
Query: 688 LHLAELAYTMKIT-EKCDVYSFGVLALEVIKGKHPGD 723
EL K + DV+S GV+ ++ G P D
Sbjct: 182 ----ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 25/224 (11%)
Query: 505 TKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
+D+D +G+G + V A + + +AVK + D + K+ EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKML 61
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMN-VITGVADAL 622
H N+VKFYG ++ EY + G L + + + D ++ + ++ GV
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 118
Query: 623 SYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN--WTELVGTFGYVA 680
Y+H I HRDI N+LLD ++SDFG A + + N+ ++ GT YVA
Sbjct: 119 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 681 PAHGNIGLHLAELAYTMKI-TEKCDVYSFGVLALEVIKGKHPGD 723
P EL + E DV+S G++ ++ G+ P D
Sbjct: 175 P----------ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 85/195 (43%), Gaps = 17/195 (8%)
Query: 529 SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYI 588
+G K+AVK N + + EI+ L RH +I+K Y S F+V EY+
Sbjct: 40 TGHKVAVKILNRQKIR-SLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYV 98
Query: 589 NRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLE 648
+ G L + N ++ + R+ I D Y H +VHRD+ NVLLD
Sbjct: 99 SGGELFDYICKNGRLDEKESRRLFQQILSGVD---YCHRHM---VVHRDLKPENVLLDAH 152
Query: 649 YEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSF 708
A+++DFG + ++ + G+ Y AP ++ + + D++S
Sbjct: 153 MNAKIADFGLSNMMS-DGEFLRXSCGSPNYAAP---------EVISGRLYAGPEVDIWSS 202
Query: 709 GVLALEVIKGKHPGD 723
GV+ ++ G P D
Sbjct: 203 GVILYALLCGTLPFD 217
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 25/224 (11%)
Query: 505 TKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
+D+D +G+G + V A + + +AVK + D + K+ EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKML 61
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMN-VITGVADAL 622
H N+VKFYG ++ EY + G L + + + D ++ + ++ GV
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 118
Query: 623 SYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN--WTELVGTFGYVA 680
Y+H I HRDI N+LLD ++SDFG A + + N+ ++ GT YVA
Sbjct: 119 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 681 PAHGNIGLHLAELAYTMKI-TEKCDVYSFGVLALEVIKGKHPGD 723
P EL + E DV+S G++ ++ G+ P D
Sbjct: 175 P----------ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 25/224 (11%)
Query: 505 TKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
+D+D +G+G + V A + + +AVK + D + K+ EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKML 61
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMN-VITGVADAL 622
H N+VKFYG ++ EY + G L + + + D ++ + ++ GV
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 118
Query: 623 SYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN--WTELVGTFGYVA 680
Y+H I HRDI N+LLD ++SDFG A + + N+ ++ GT YVA
Sbjct: 119 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 681 PAHGNIGLHLAELAYTMKI-TEKCDVYSFGVLALEVIKGKHPGD 723
P EL + E DV+S G++ ++ G+ P D
Sbjct: 175 P----------ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 22/165 (13%)
Query: 560 LTKIRHRNIVKF-YGFCSHVRHSFVVYEYINRGSLATVLSNN--FASEDFDWRKRMNVIT 616
L ++ H IVK Y F + + +++ +++ G L T LS F ED + +
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTEEDVKF-----YLA 133
Query: 617 GVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTF 676
+A AL ++H I++RD+ N+LLD E +++DFG +K + GT
Sbjct: 134 ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTV 190
Query: 677 GYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
Y+AP N H T+ D +SFGVL E++ G P
Sbjct: 191 EYMAPEVVNRRGH----------TQSADWWSFGVLMFEMLTGTLP 225
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 22/165 (13%)
Query: 560 LTKIRHRNIVKF-YGFCSHVRHSFVVYEYINRGSLATVLSNN--FASEDFDWRKRMNVIT 616
L ++ H IVK Y F + + +++ +++ G L T LS F ED + +
Sbjct: 81 LVEVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTEEDVKF-----YLA 134
Query: 617 GVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTF 676
+A AL ++H I++RD+ N+LLD E +++DFG +K + GT
Sbjct: 135 ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTV 191
Query: 677 GYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
Y+AP N H T+ D +SFGVL E++ G P
Sbjct: 192 EYMAPEVVNRRGH----------TQSADWWSFGVLMFEMLTGTLP 226
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 85/193 (44%), Gaps = 25/193 (12%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRG 591
++A+K N M ++ EFLNE + + ++V+ G S + + V+ E + RG
Sbjct: 51 RVAIKTVNEA---ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 107
Query: 592 SLATVL-------SNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVL 644
L + L NN K + + +AD ++Y++ + F VHRD+++ N +
Sbjct: 108 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCM 164
Query: 645 LDLEYEARVSDFGTAKLLKPNSSNWTELVGTFG--YVAPAHGNIGLHLAELAYTMKITEK 702
+ ++ ++ DFG + + G +++P G+ T
Sbjct: 165 VAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGV----------FTTY 214
Query: 703 CDVYSFGVLALEV 715
DV+SFGV+ E+
Sbjct: 215 SDVWSFGVVLWEI 227
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 22/165 (13%)
Query: 560 LTKIRHRNIVKF-YGFCSHVRHSFVVYEYINRGSLATVLSNN--FASEDFDWRKRMNVIT 616
L ++ H IVK Y F + + +++ +++ G L T LS F ED + +
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTEEDVKF-----YLA 133
Query: 617 GVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTF 676
+A AL ++H I++RD+ N+LLD E +++DFG +K + GT
Sbjct: 134 ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTV 190
Query: 677 GYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
Y+AP N H T+ D +SFGVL E++ G P
Sbjct: 191 EYMAPEVVNRRGH----------TQSADWWSFGVLMFEMLTGTLP 225
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 122/304 (40%), Gaps = 57/304 (18%)
Query: 513 CIGKGEHRSVYRA-----KLPSG-DKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHR 566
+G+GE V +A K +G +AVK N S+ ++ L+E L ++ H
Sbjct: 30 TLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE---NASPSELRDLLSEFNVLKQVNHP 86
Query: 567 NIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNN-------------FASEDFDWRKRMN 613
+++K YG CS ++ EY GSL L + S D
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 614 VITGVADALSY-----MHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
+ G + ++ M + +VHRD+++ N+L+ + ++SDFG ++ + S
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS- 205
Query: 669 WTELVGTFGYVAPAHGNIGLHLA--ELAYTMKITEKCDVYSFGVLALEVIK---GKHPGD 723
YV + G I + E + T + DV+SFGVL E++ +PG
Sbjct: 206 ---------YVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256
Query: 724 XXXXXXXXXXXINIEFNAM-LDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTV 782
FN + HR+ P + E++ +M L C P+ RP +
Sbjct: 257 PPERL----------FNLLKTGHRMERPD-NCSEEMYRLM---LQCWKQEPDKRPVFADI 302
Query: 783 CQLL 786
+ L
Sbjct: 303 SKDL 306
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 98/233 (42%), Gaps = 16/233 (6%)
Query: 492 FDGKIMYEEIIRRTKDFDAKYCIGK---GEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMS 548
F YE + R D IG+ G VY+A+ +A K +++
Sbjct: 20 FQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELE 79
Query: 549 DQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDW 608
D ++ EI L H NIVK + + +++ E+ G++ V+
Sbjct: 80 D---YMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPLTE 134
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
+ V DAL+Y+H + I+HRD+ + N+L L+ + +++DFG +
Sbjct: 135 SQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR 191
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+GT ++AP + + E + K DV+S G+ +E+ + + P
Sbjct: 192 RDSFIGTPYWMAPE-----VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 81/173 (46%), Gaps = 17/173 (9%)
Query: 550 QKEFLN-EIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDW 608
Q+E ++ EI + H+++V F+GF FVV E R SL + A + +
Sbjct: 60 QREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEA 119
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
R + I Y+H + ++HRD+ N+ L+ + E ++ DFG A ++ +
Sbjct: 120 RYYLRQIVL---GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER 173
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
L GT Y+AP L++ ++ ++ DV+S G + ++ GK P
Sbjct: 174 KKTLCGTPNYIAPE------VLSKKGHSFEV----DVWSIGCIMYTLLVGKPP 216
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 86/193 (44%), Gaps = 25/193 (12%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRG 591
++A+K N M ++ EFLNE + + ++V+ G S + + V+ E + RG
Sbjct: 57 RVAIKTVNE---AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 113
Query: 592 -------SLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVL 644
SL ++NN K + + +AD ++Y++ + F VHRD+++ N +
Sbjct: 114 DLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCM 170
Query: 645 LDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL--AELAYTMKITEK 702
+ ++ ++ DFG + ++ T Y G + + E T
Sbjct: 171 VAEDFTVKIGDFGMTR----------DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTY 220
Query: 703 CDVYSFGVLALEV 715
DV+SFGV+ E+
Sbjct: 221 SDVWSFGVVLWEI 233
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 81/173 (46%), Gaps = 17/173 (9%)
Query: 550 QKEFLN-EIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDW 608
Q+E ++ EI + H+++V F+GF FVV E R SL + A + +
Sbjct: 60 QREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEA 119
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
R + I Y+H + ++HRD+ N+ L+ + E ++ DFG A ++ +
Sbjct: 120 RYYLRQIVL---GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER 173
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
L GT Y+AP L++ ++ ++ DV+S G + ++ GK P
Sbjct: 174 KKTLCGTPNYIAPE------VLSKKGHSFEV----DVWSIGCIMYTLLVGKPP 216
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 25/179 (13%)
Query: 548 SDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSL--ATVLSNNFASED 605
S+ L+E+ L ++ H NI+K Y F R+ ++V E G L +L F+ D
Sbjct: 63 SNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVD 122
Query: 606 FDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYE---ARVSDFGTAKLL 662
++ V +Y+H IVHRD+ N+LL+ + ++ DFG +
Sbjct: 123 -----AAVIMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF 174
Query: 663 KPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ E +GT Y+AP K EKCDV+S GV+ ++ G P
Sbjct: 175 EVG-GKMKERLGTAYYIAPE-----------VLRKKYDEKCDVWSCGVILYILLCGYPP 221
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 85/196 (43%), Gaps = 24/196 (12%)
Query: 533 IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHS----FVVYEYI 588
+AVK + D S F E + + H IV Y + ++V EY+
Sbjct: 40 VAVKVLRADLARDP-SFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYV 98
Query: 589 NRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLE 648
+ +L ++ ++ + VI AL++ H + I+HRD+ N+++
Sbjct: 99 DGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISAT 152
Query: 649 YEARVSDFGTAKLLKPNSSNWTE---LVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDV 705
+V DFG A+ + + ++ T+ ++GT Y++P E A + + DV
Sbjct: 153 NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP----------EQARGDSVDARSDV 202
Query: 706 YSFGVLALEVIKGKHP 721
YS G + EV+ G+ P
Sbjct: 203 YSLGCVLYEVLTGEPP 218
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 85/202 (42%), Gaps = 26/202 (12%)
Query: 529 SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRH------SF 582
+G+++A+K+ +++ + EI+ + K+ H N+V ++
Sbjct: 39 TGEQVAIKQCRQELSP---KNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPL 95
Query: 583 VVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNN 642
+ EY G L L+ +++ ++ AL Y+H + I+HRD+ N
Sbjct: 96 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPEN 152
Query: 643 VLLDLEYEA---RVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKI 699
++L + ++ D G AK L TE VGT Y+AP EL K
Sbjct: 153 IVLQPGPQRLIHKIIDLGYAKELD-QGELCTEFVGTLQYLAP----------ELLEQKKY 201
Query: 700 TEKCDVYSFGVLALEVIKGKHP 721
T D +SFG LA E I G P
Sbjct: 202 TVTVDYWSFGTLAFECITGFRP 223
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 85/202 (42%), Gaps = 26/202 (12%)
Query: 529 SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRH------SF 582
+G+++A+K+ +++ + EI+ + K+ H N+V ++
Sbjct: 38 TGEQVAIKQCRQELSP---KNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPL 94
Query: 583 VVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNN 642
+ EY G L L+ +++ ++ AL Y+H + I+HRD+ N
Sbjct: 95 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPEN 151
Query: 643 VLLDLEYEA---RVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKI 699
++L + ++ D G AK L TE VGT Y+AP EL K
Sbjct: 152 IVLQPGPQRLIHKIIDLGYAKELD-QGELCTEFVGTLQYLAP----------ELLEQKKY 200
Query: 700 TEKCDVYSFGVLALEVIKGKHP 721
T D +SFG LA E I G P
Sbjct: 201 TVTVDYWSFGTLAFECITGFRP 222
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 102/226 (45%), Gaps = 30/226 (13%)
Query: 508 FDAKYCIGKGEHRSVYRAK-LPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHR 566
F+ +G G + VY+ + + +G A+K + D+ + K+ +N +K + HR
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD--VTGDEEEEIKQEINMLKKYS--HHR 81
Query: 567 NIVKFYGFCSHVRHS--------FVVYEYINRGSLATVLSN---NFASEDFDWRKRMNVI 615
NI +YG + ++ + ++V E+ GS+ ++ N N E++ +
Sbjct: 82 NIATYYG--AFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEW----IAYIC 135
Query: 616 TGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGT 675
+ LS++H ++HRDI NVLL E ++ DFG + L +GT
Sbjct: 136 REILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGT 192
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
++AP + + Y K D++S G+ A+E+ +G P
Sbjct: 193 PYWMAPEVIACDEN-PDATYDF----KSDLWSLGITAIEMAEGAPP 233
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 81/173 (46%), Gaps = 17/173 (9%)
Query: 550 QKEFLN-EIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDW 608
Q+E ++ EI + H+++V F+GF FVV E R SL + A + +
Sbjct: 64 QREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEA 123
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
R + I Y+H + ++HRD+ N+ L+ + E ++ DFG A ++ +
Sbjct: 124 RYYLRQIVL---GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER 177
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
L GT Y+AP L++ ++ ++ DV+S G + ++ GK P
Sbjct: 178 KKTLCGTPNYIAPE------VLSKKGHSFEV----DVWSIGCIMYTLLVGKPP 220
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 86/193 (44%), Gaps = 25/193 (12%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRG 591
++A+K N M ++ EFLNE + + ++V+ G S + + V+ E + RG
Sbjct: 47 RVAIKTVNEA---ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 103
Query: 592 -------SLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVL 644
SL ++NN K + + +AD ++Y++ + F VHRD+++ N +
Sbjct: 104 DLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCM 160
Query: 645 LDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL--AELAYTMKITEK 702
+ ++ ++ DFG + ++ T Y G + + E T
Sbjct: 161 VAEDFTVKIGDFGMTR----------DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTY 210
Query: 703 CDVYSFGVLALEV 715
DV+SFGV+ E+
Sbjct: 211 SDVWSFGVVLWEI 223
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 76/174 (43%), Gaps = 25/174 (14%)
Query: 553 FLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSL--ATVLSNNFASEDFDWRK 610
L+E+ L ++ H NI+K Y F R+ ++V E G L +L F+ D
Sbjct: 51 LLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVD----- 105
Query: 611 RMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYE---ARVSDFGTAKLLKPNSS 667
++ V +Y+H IVHRD+ N+LL+ + ++ DFG + +
Sbjct: 106 AAVIMKQVLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG-G 161
Query: 668 NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
E +GT Y+AP K EKCDV+S GV+ ++ G P
Sbjct: 162 KMKERLGTAYYIAPE-----------VLRKKYDEKCDVWSCGVILYILLCGYPP 204
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 98/233 (42%), Gaps = 16/233 (6%)
Query: 492 FDGKIMYEEIIRRTKDFDAKYCIGK---GEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMS 548
F YE + R D IG+ G VY+A+ +A K +++
Sbjct: 20 FQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELE 79
Query: 549 DQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDW 608
D ++ EI L H NIVK + + +++ E+ G++ V+
Sbjct: 80 D---YMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPLTE 134
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
+ V DAL+Y+H + I+HRD+ + N+L L+ + +++DFG +
Sbjct: 135 SQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQR 191
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+GT ++AP + + E + K DV+S G+ +E+ + + P
Sbjct: 192 RDSFIGTPYWMAPE-----VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 99/224 (44%), Gaps = 25/224 (11%)
Query: 505 TKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
+D+D +G+G V A + + +AVK + D + K+ EI +
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKML 61
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMN-VITGVADAL 622
H N+VKFYG ++ EY + G L + + + D ++ + ++ GV
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV--- 118
Query: 623 SYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN--WTELVGTFGYVA 680
Y+H I HRDI N+LLD ++SDFG A + + N+ ++ GT YVA
Sbjct: 119 -YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 681 PAHGNIGLHLAELAYTMKI-TEKCDVYSFGVLALEVIKGKHPGD 723
P EL + E DV+S G++ ++ G+ P D
Sbjct: 175 P----------ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 98/233 (42%), Gaps = 16/233 (6%)
Query: 492 FDGKIMYEEIIRRTKDFDAKYCIGK---GEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMS 548
F YE + R D IG+ G VY+A+ +A K +++
Sbjct: 20 FQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELE 79
Query: 549 DQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDW 608
D ++ EI L H NIVK + + +++ E+ G++ V+
Sbjct: 80 D---YMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPLTE 134
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
+ V DAL+Y+H + I+HRD+ + N+L L+ + +++DFG +
Sbjct: 135 SQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQR 191
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+GT ++AP + + E + K DV+S G+ +E+ + + P
Sbjct: 192 RDXFIGTPYWMAPE-----VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 21/213 (9%)
Query: 513 CIGKGEHRSVYRAK-LPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKF 571
IGKG V A+ + +G ++A+K + N S QK F E++ + + H NIVK
Sbjct: 19 TIGKGNFAKVKLARHILTGREVAIKIIDKTQLN-PTSLQKLF-REVRIMKILNHPNIVKL 76
Query: 572 YGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFP 631
+ + +++ EY + G + L + ++ + R + I A+ Y H
Sbjct: 77 FEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS---AVQYCHQ---K 130
Query: 632 PIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLA 691
IVHRD+ + N+LLD + +++DFG + T G+ Y AP
Sbjct: 131 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT-FCGSPPYAAP---------- 179
Query: 692 ELAYTMKIT-EKCDVYSFGVLALEVIKGKHPGD 723
EL K + DV+S GV+ ++ G P D
Sbjct: 180 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 126/304 (41%), Gaps = 64/304 (21%)
Query: 514 IGKGEHRSVYRAKLPSGDK--------IAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-R 564
+G+G V A+ DK +AVK +SD ++E++ + I +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 99
Query: 565 HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLS-------------NNFASEDFDWRKR 611
H+NI+ G C+ +V+ EY ++G+L L N E ++
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 612 MNVITGVADALSYM-HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWT 670
++ +A + Y+ C +HRD+++ NVL+ R++DFG A+ + N+ ++
Sbjct: 160 VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMRIADFGLARDI--NNIDY- 212
Query: 671 ELVGTFGYVAPAHGNIGLHL--AELAYTMKITEKCDVYSFGVLALEVIK---GKHPGDXX 725
Y +G + + E + T + DV+SFGVL E+ +PG
Sbjct: 213 -------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG--- 262
Query: 726 XXXXXXXXXINIE--FNAMLD-HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTV 782
I +E F + + HR+ P+ E + + + C P+ RPT + +
Sbjct: 263 ---------IPVEELFKLLKEGHRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQL 309
Query: 783 CQLL 786
+ L
Sbjct: 310 VEDL 313
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 81/173 (46%), Gaps = 17/173 (9%)
Query: 550 QKEFLN-EIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDW 608
Q+E ++ EI + H+++V F+GF FVV E R SL + A + +
Sbjct: 84 QREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEA 143
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
R + I Y+H + ++HRD+ N+ L+ + E ++ DFG A ++ +
Sbjct: 144 RYYLRQIVL---GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER 197
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
L GT Y+AP L++ ++ ++ DV+S G + ++ GK P
Sbjct: 198 KKVLCGTPNYIAPE------VLSKKGHSFEV----DVWSIGCIMYTLLVGKPP 240
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 21/213 (9%)
Query: 513 CIGKGEHRSVYRAK-LPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKF 571
IGKG V A+ + +G ++AVK + N S ++ E++ + H NIVK
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNS--SSLQKLFREVRIXKVLNHPNIVKL 78
Query: 572 YGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFP 631
+ + ++V EY + G + L + ++ + R + I A+ Y H
Sbjct: 79 FEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVS---AVQYCHQKF-- 133
Query: 632 PIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLA 691
IVHRD+ + N+LLD + +++DFG + + G Y AP
Sbjct: 134 -IVHRDLKAENLLLDADXNIKIADFGFSNEF-TFGNKLDAFCGAPPYAAP---------- 181
Query: 692 ELAYTMKIT-EKCDVYSFGVLALEVIKGKHPGD 723
EL K + DV+S GV+ ++ G P D
Sbjct: 182 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 81/173 (46%), Gaps = 17/173 (9%)
Query: 550 QKEFLN-EIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDW 608
Q+E ++ EI + H+++V F+GF FVV E R SL + A + +
Sbjct: 82 QREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEA 141
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
R + I Y+H + ++HRD+ N+ L+ + E ++ DFG A ++ +
Sbjct: 142 RYYLRQIVL---GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER 195
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
L GT Y+AP L++ ++ ++ DV+S G + ++ GK P
Sbjct: 196 KKVLCGTPNYIAPE------VLSKKGHSFEV----DVWSIGCIMYTLLVGKPP 238
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 114/276 (41%), Gaps = 52/276 (18%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSFVVYEYINR 590
K+AVK S +SD ++E++ + I +H+NI+ G C+ +V+ EY ++
Sbjct: 103 KVAVKMLKSDATEKDLSD---LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 159
Query: 591 GSLATVLS-------------NNFASEDFDWRKRMNVITGVADALSYM-HHDCFPPIVHR 636
G+L L ++ E + ++ VA + Y+ C +HR
Sbjct: 160 GNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC----IHR 215
Query: 637 DISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYT 696
D+++ NVL+ + +++DFG A+ + + + + E +
Sbjct: 216 DLAARNVLVTEDNVMKIADFGLARDI--------HHIDYYKKTTNGRLPVKWMAPEALFD 267
Query: 697 MKITEKCDVYSFGVLALEVIK---GKHPGDXXXXXXXXXXXINIE--FNAMLD-HRLPHP 750
T + DV+SFGVL E+ +PG + +E F + + HR+ P
Sbjct: 268 RIYTHQSDVWSFGVLLWEIFTLGGSPYPG------------VPVEELFKLLKEGHRMDKP 315
Query: 751 SLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
S E + + + C P+ RPT + + + L
Sbjct: 316 SNCTNELYMMMRD----CWHAVPSQRPTFKQLVEDL 347
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 26/220 (11%)
Query: 514 IGKGEHRSVYRAK-LPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G+G +V+R + +GD A+K FN+ + Q + E + L K+ H+NIVK +
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ---MREFEVLKKLNHKNIVKLF 73
Query: 573 GFCSH--VRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
RH ++ E+ GSL TVL + + + V+ V ++++ +
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG- 132
Query: 631 PPIVHRDISSNNVLL----DLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNI 686
IVHR+I N++ D + +++DFG A+ L+ + + L GT Y+ P
Sbjct: 133 --IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE-DDEQFVXLYGTEEYLHP----- 184
Query: 687 GLHLAELAYTMKITEK-----CDVYSFGVLALEVIKGKHP 721
+ E A K +K D++S GV G P
Sbjct: 185 --DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 25/193 (12%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRG 591
++A+K N M ++ EFLNE + + ++V+ G S + + V+ E + RG
Sbjct: 44 RVAIKTVNEA---ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 100
Query: 592 SLATVL-------SNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVL 644
L + L NN K + + +AD ++Y++ + F VHRD+++ N +
Sbjct: 101 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCM 157
Query: 645 LDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL--AELAYTMKITEK 702
+ ++ ++ DFG + ++ T Y G + + E T
Sbjct: 158 VAEDFTVKIGDFGMTR----------DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTY 207
Query: 703 CDVYSFGVLALEV 715
DV+SFGV+ E+
Sbjct: 208 SDVWSFGVVLWEI 220
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 25/193 (12%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRG 591
++A+K N M ++ EFLNE + + ++V+ G S + + V+ E + RG
Sbjct: 57 RVAIKTVNE---AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 113
Query: 592 SLATVL-------SNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVL 644
L + L NN K + + +AD ++Y++ + F VHRD+++ N +
Sbjct: 114 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCM 170
Query: 645 LDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL--AELAYTMKITEK 702
+ ++ ++ DFG + ++ T Y G + + E T
Sbjct: 171 VAEDFTVKIGDFGMTR----------DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTY 220
Query: 703 CDVYSFGVLALEV 715
DV+SFGV+ E+
Sbjct: 221 SDVWSFGVVLWEI 233
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 26/220 (11%)
Query: 514 IGKGEHRSVYRAK-LPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G+G +V+R + +GD A+K FN+ + Q + E + L K+ H+NIVK +
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ---MREFEVLKKLNHKNIVKLF 73
Query: 573 GFCSH--VRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
RH ++ E+ GSL TVL + + + V+ V ++++ +
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG- 132
Query: 631 PPIVHRDISSNNVLL----DLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNI 686
IVHR+I N++ D + +++DFG A+ L+ + + L GT Y+ P
Sbjct: 133 --IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE-DDEQFVSLYGTEEYLHP----- 184
Query: 687 GLHLAELAYTMKITEK-----CDVYSFGVLALEVIKGKHP 721
+ E A K +K D++S GV G P
Sbjct: 185 --DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 78/176 (44%), Gaps = 23/176 (13%)
Query: 553 FLNEIKALTKIRHRNIVKFYGFCSHVRHS----FVVYEYINRGSLATVLSNNFASEDFDW 608
F E + + H IV Y + ++V EY++ +L ++
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTP 115
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
++ + VI AL++ H + I+HRD+ N+++ +V DFG A+ + + ++
Sbjct: 116 KRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 669 WTE---LVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
T+ ++GT Y++P E A + + DVYS G + EV+ G+ P
Sbjct: 173 VTQTAAVIGTAQYLSP----------EQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 78/176 (44%), Gaps = 23/176 (13%)
Query: 553 FLNEIKALTKIRHRNIVKFYGFCSHVRHS----FVVYEYINRGSLATVLSNNFASEDFDW 608
F E + + H IV Y + ++V EY++ +L ++
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTP 115
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
++ + VI AL++ H + I+HRD+ N+++ +V DFG A+ + + ++
Sbjct: 116 KRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 669 WTE---LVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
T+ ++GT Y++P E A + + DVYS G + EV+ G+ P
Sbjct: 173 VTQTAAVIGTAQYLSP----------EQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 127/304 (41%), Gaps = 64/304 (21%)
Query: 514 IGKGEHRSVYRAKLPSGDK--------IAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-R 564
+G+G V A+ DK +AVK + +SD ++E++ + I +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSD---LVSEMEMMKMIGK 99
Query: 565 HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLS-------------NNFASEDFDWRKR 611
H+NI+ G C+ +V+ EY ++G+L L N E ++
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 612 MNVITGVADALSYM-HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWT 670
++ +A + Y+ C +HRD+++ NVL+ +++DFG A+ + N+ ++
Sbjct: 160 VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDI--NNIDY- 212
Query: 671 ELVGTFGYVAPAHGNIGLHL--AELAYTMKITEKCDVYSFGVLALEVIK---GKHPGDXX 725
Y +G + + E + T + DV+SFGVL E+ +PG
Sbjct: 213 -------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG--- 262
Query: 726 XXXXXXXXXINIE--FNAMLD-HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTV 782
I +E F + + HR+ P+ E + + + C P+ RPT + +
Sbjct: 263 ---------IPVEELFKLLKEGHRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQL 309
Query: 783 CQLL 786
+ L
Sbjct: 310 VEDL 313
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 114/285 (40%), Gaps = 51/285 (17%)
Query: 514 IGKGEHRSVYRAKLPSGD----KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
+G+GE SV L D K+AVK N + +EFL+E + H N++
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMK--LDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 570 KFYGFC-----SHVRHSFVVYEYINRGSLATVL---SNNFASEDFDWRKRMNVITGVADA 621
+ G C + V+ ++ G L T L + + + + +A
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 622 LSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVA- 680
+ Y+ + F +HRD+++ N +L + V+DFG +K K S ++ G +A
Sbjct: 160 MEYLSNRNF---LHRDLAARNCMLRDDMTVCVADFGLSK--KIYSGDYYRQ----GRIAK 210
Query: 681 -PAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV-IKGKHPGDXXXXXXXXXXXINIE 738
P LA+ Y T K DV++FGV E+ +G P ++
Sbjct: 211 MPVKWIAIESLADRVY----TSKSDVWAFGVTMWEIATRGMTP------------YPGVQ 254
Query: 739 FNAMLD-----HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPT 778
+ M D HRL P ++ L + E+ C P RPT
Sbjct: 255 NHEMYDYLLHGHRLKQP----EDCLDELYEIMYSCWRTDPLDRPT 295
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 25/193 (12%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRG 591
++A+K N M ++ EFLNE + + ++V+ G S + + V+ E + RG
Sbjct: 48 RVAIKTVNEA---ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 104
Query: 592 SLATVL-------SNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVL 644
L + L NN K + + +AD ++Y++ + F VHRD+++ N +
Sbjct: 105 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCM 161
Query: 645 LDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL--AELAYTMKITEK 702
+ ++ ++ DFG + ++ T Y G + + E T
Sbjct: 162 VAEDFTVKIGDFGMTR----------DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTY 211
Query: 703 CDVYSFGVLALEV 715
DV+SFGV+ E+
Sbjct: 212 SDVWSFGVVLWEI 224
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 78/176 (44%), Gaps = 23/176 (13%)
Query: 553 FLNEIKALTKIRHRNIVKFYGFCSHVRHS----FVVYEYINRGSLATVLSNNFASEDFDW 608
F E + + H IV Y + ++V EY++ +L ++
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTP 115
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
++ + VI AL++ H + I+HRD+ N+++ +V DFG A+ + + ++
Sbjct: 116 KRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 669 WTE---LVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
T+ ++GT Y++P E A + + DVYS G + EV+ G+ P
Sbjct: 173 VTQTAAVIGTAQYLSP----------EQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 25/193 (12%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRG 591
++A+K N M ++ EFLNE + + ++V+ G S + + V+ E + RG
Sbjct: 50 RVAIKTVNEA---ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 106
Query: 592 SLATVL-------SNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVL 644
L + L NN K + + +AD ++Y++ + F VHRD+++ N +
Sbjct: 107 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCM 163
Query: 645 LDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL--AELAYTMKITEK 702
+ ++ ++ DFG + ++ T Y G + + E T
Sbjct: 164 VAEDFTVKIGDFGMTR----------DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTY 213
Query: 703 CDVYSFGVLALEV 715
DV+SFGV+ E+
Sbjct: 214 SDVWSFGVVLWEI 226
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 81/173 (46%), Gaps = 17/173 (9%)
Query: 550 QKEFLN-EIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDW 608
Q+E ++ EI + H+++V F+GF FVV E R SL + A + +
Sbjct: 58 QREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEA 117
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
R + I Y+H + ++HRD+ N+ L+ + E ++ DFG A ++ +
Sbjct: 118 RYYLRQIVL---GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER 171
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
L GT Y+AP L++ ++ ++ DV+S G + ++ GK P
Sbjct: 172 KKVLCGTPNYIAPE------VLSKKGHSFEV----DVWSIGCIMYTLLVGKPP 214
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 116/278 (41%), Gaps = 56/278 (20%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSFVVYEYINR 590
K+AVK S +SD ++E++ + I +H+NI+ G C+ +V+ EY ++
Sbjct: 62 KVAVKMLKSDATEKDLSD---LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 118
Query: 591 GSLATVLS-------------NNFASEDFDWRKRMNVITGVADALSYM-HHDCFPPIVHR 636
G+L L ++ E + ++ VA + Y+ C +HR
Sbjct: 119 GNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC----IHR 174
Query: 637 DISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTF--GYVAPAHGNIGLHLAELA 694
D+++ NVL+ + +++DFG A+ + G ++AP E
Sbjct: 175 DLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAP----------EAL 224
Query: 695 YTMKITEKCDVYSFGVLALEVIK---GKHPGDXXXXXXXXXXXINIE--FNAMLD-HRLP 748
+ T + DV+SFGVL E+ +PG + +E F + + HR+
Sbjct: 225 FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG------------VPVEELFKLLKEGHRMD 272
Query: 749 HPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
PS E + + + C P+ RPT + + + L
Sbjct: 273 KPSNCTNELYMMMRD----CWHAVPSQRPTFKQLVEDL 306
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 85/196 (43%), Gaps = 24/196 (12%)
Query: 533 IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHS----FVVYEYI 588
+AVK + D S F E + + H IV Y + ++V EY+
Sbjct: 57 VAVKVLRADLARDP-SFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYV 115
Query: 589 NRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLE 648
+ +L ++ ++ + VI AL++ H + I+HRD+ N+++
Sbjct: 116 DGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISAT 169
Query: 649 YEARVSDFGTAKLLKPNSSNWTE---LVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDV 705
+V DFG A+ + + ++ T+ ++GT Y++P E A + + DV
Sbjct: 170 NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP----------EQARGDSVDARSDV 219
Query: 706 YSFGVLALEVIKGKHP 721
YS G + EV+ G+ P
Sbjct: 220 YSLGCVLYEVLTGEPP 235
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 94/207 (45%), Gaps = 20/207 (9%)
Query: 514 IGKGEHRSVYRAK-LPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
IG+G + V++ + +G +A+KKF D +K L EI+ L +++H N+V
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLES--EDDPVIKKIALREIRMLKQLKHPNLVNLL 68
Query: 573 GFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH-HDCFP 631
R +V+EY + L + + + ++ A+++ H H+C
Sbjct: 69 EVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVK---SITWQTLQAVNFCHKHNC-- 123
Query: 632 PIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLA 691
+HRD+ N+L+ ++ DFG A+LL S + + V T Y +P L +
Sbjct: 124 --IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPE-----LLVG 176
Query: 692 ELAYTMKITEKCDVYSFGVLALEVIKG 718
+ Y + DV++ G + E++ G
Sbjct: 177 DTQYGPPV----DVWAIGCVFAELLSG 199
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 25/193 (12%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRG 591
++A+K N M ++ EFLNE + + ++V+ G S + + V+ E + RG
Sbjct: 51 RVAIKTVNEA---ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 107
Query: 592 SLATVL-------SNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVL 644
L + L NN K + + +AD ++Y++ + F VHRD+++ N +
Sbjct: 108 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCM 164
Query: 645 LDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL--AELAYTMKITEK 702
+ ++ ++ DFG + ++ T Y G + + E T
Sbjct: 165 VAEDFTVKIGDFGMTR----------DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTY 214
Query: 703 CDVYSFGVLALEV 715
DV+SFGV+ E+
Sbjct: 215 SDVWSFGVVLWEI 227
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 21/212 (9%)
Query: 514 IGKGEHRSVYRAK-LPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
IGKG V A+ + +G ++A+K + N S QK F E++ + + H NIVK +
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLN-PTSLQKLF-REVRIMKILNHPNIVKLF 80
Query: 573 GFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPP 632
+ +++ EY + G + L + ++ + R + I A+ Y H
Sbjct: 81 EVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS---AVQYCHQ---KR 134
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
IVHRD+ + N+LLD + +++DFG + G Y AP E
Sbjct: 135 IVHRDLKAENLLLDADMNIKIADFGFSNEFTV-GGKLDAFCGAPPYAAP----------E 183
Query: 693 LAYTMKIT-EKCDVYSFGVLALEVIKGKHPGD 723
L K + DV+S GV+ ++ G P D
Sbjct: 184 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 25/193 (12%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRG 591
++A+K N M ++ EFLNE + + ++V+ G S + + V+ E + RG
Sbjct: 79 RVAIKTVNEA---ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 135
Query: 592 SLATVL-------SNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVL 644
L + L NN K + + +AD ++Y++ + F VHRD+++ N +
Sbjct: 136 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCM 192
Query: 645 LDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL--AELAYTMKITEK 702
+ ++ ++ DFG + ++ T Y G + + E T
Sbjct: 193 VAEDFTVKIGDFGMTR----------DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTY 242
Query: 703 CDVYSFGVLALEV 715
DV+SFGV+ E+
Sbjct: 243 SDVWSFGVVLWEI 255
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 91/225 (40%), Gaps = 21/225 (9%)
Query: 500 EIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKI-AVKKFNSPFPNDQMSDQKEFLNEIK 558
+I + +DF +GKG V+ A+ ++ A+K M D E K
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVV--LMDDDVECTMVEK 68
Query: 559 ALTKIRHRNIVKFYGFCSHVRHS--FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVIT 616
+ + + + FC+ F V EY+N G L + + FD +
Sbjct: 69 RVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQ---SCHKFDLSRATFYAA 125
Query: 617 GVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTF 676
+ L ++H IV+RD+ +N+LLD + +++DFG K + GT
Sbjct: 126 EIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTP 182
Query: 677 GYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
Y+AP E+ K D +SFGVL E++ G+ P
Sbjct: 183 DYIAP----------EILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 81/172 (47%), Gaps = 12/172 (6%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+GKG V R K+P+G + A K N+ D ++ E + ++H NIV+ +
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTK--KLSARDHQKLEREARICRLLKHPNIVRLH 69
Query: 573 GFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPP 632
S ++V++ + G L + A E + + I + +++++ H
Sbjct: 70 DSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQILESVNHCH---LNG 123
Query: 633 IVHRDISSNNVLLDLEYEA---RVSDFGTAKLLKPNSSNWTELVGTFGYVAP 681
IVHRD+ N+LL + + +++DFG A ++ + W GT GY++P
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSP 175
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 513 CIGKGEHRSVYRAK-LPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKF 571
IGKG V A+ + +G ++AVK + N S QK F E++ + + H NIVK
Sbjct: 22 TIGKGNFAKVKLARHVLTGREVAVKIIDKTQLN-PTSLQKLF-REVRIMKILNHPNIVKL 79
Query: 572 YGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFP 631
+ + ++V EY + G + L + ++ + R + I A+ Y H
Sbjct: 80 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS---AVQYCHQKY-- 134
Query: 632 PIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLA 691
IVHRD+ + N+LLD + +++DFG + + T G+ Y AP
Sbjct: 135 -IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT-FCGSPPYAAP---------- 182
Query: 692 ELAYTMKIT-EKCDVYSFGVLALEVIKGKHPGD 723
EL K + DV+S GV+ ++ G P D
Sbjct: 183 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 124/300 (41%), Gaps = 59/300 (19%)
Query: 513 CIGK---GEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNI 568
C G+ E + + K +AVK +SD ++E++ + I +H+NI
Sbjct: 34 CFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGKHKNI 90
Query: 569 VKFYGFCSHVRHSFVVYEYINRGSLATVLS-------------NNFASEDFDWRKRMNVI 615
+ G C+ +V+ EY ++G+L L N E ++ ++
Sbjct: 91 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 150
Query: 616 TGVADALSYM-HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG 674
+A + Y+ C +HRD+++ NVL+ +++DFG A+ + N+ ++
Sbjct: 151 YQLARGMEYLASQKC----IHRDLTARNVLVTENNVMKIADFGLARDI--NNIDY----- 199
Query: 675 TFGYVAPAHGNIGLHL--AELAYTMKITEKCDVYSFGVLALEVIK---GKHPGDXXXXXX 729
Y +G + + E + T + DV+SFGVL E+ +PG
Sbjct: 200 ---YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG------- 249
Query: 730 XXXXXINIE--FNAMLD-HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
I +E F + + HR+ P+ E + + + C P+ RPT + + + L
Sbjct: 250 -----IPVEELFKLLKEGHRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQLVEDL 300
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 94/223 (42%), Gaps = 39/223 (17%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
IGKG + V+ K G+K+AVK F F ++ S +E EI +RH NI+ F
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVKVF---FTTEEASWFRE--TEIYQTVLMRHENILGFIA 98
Query: 574 F----CSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDC 629
+++ +Y GSL L S D + + + L ++H +
Sbjct: 99 ADIKGTGSWTQLYLITDYHENGSLYDYLK----STTLDAKSMLKLAYSSVSGLCHLHTEI 154
Query: 630 F-----PPIVHRDISSNNVLLDLEYEARVSDFGTAKL---------LKPNSSNWTELVGT 675
F P I HRD+ S N+L+ ++D G A + PN+ VGT
Sbjct: 155 FSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTR-----VGT 209
Query: 676 FGYVAPAHGNIGLHLAEL-AYTMKITEKCDVYSFGVLALEVIK 717
Y+ P + L+ +Y M D+YSFG++ EV +
Sbjct: 210 KRYMPPEVLDESLNRNHFQSYIM-----ADMYSFGLILWEVAR 247
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 25/210 (11%)
Query: 514 IGKGEHRSVYRAKL-PSGDK----IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNI 568
+GKG SV + P GD +AVK+ P+ Q ++F EI+ L + I
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ----RDFQREIQILKALHSDFI 70
Query: 569 VKFYG--FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM- 625
VK+ G + +V EY+ G L L + A D + + + + + Y+
Sbjct: 71 VKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR--LDASRLLLYSSQICKGMEYLG 128
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
C VHRD+++ N+L++ E +++DFG AKLL + P
Sbjct: 129 SRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXV-------VREPGQSP 177
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEV 715
I + E + + DV+SFGV+ E+
Sbjct: 178 IFWYAPESLSDNIFSRQSDVWSFGVVLYEL 207
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 114/276 (41%), Gaps = 52/276 (18%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSFVVYEYINR 590
K+AVK S +SD ++E++ + I +H+NI+ G C+ +V+ EY ++
Sbjct: 51 KVAVKMLKSDATEKDLSD---LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 107
Query: 591 GSLATVLS-------------NNFASEDFDWRKRMNVITGVADALSYM-HHDCFPPIVHR 636
G+L L ++ E + ++ VA + Y+ C +HR
Sbjct: 108 GNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC----IHR 163
Query: 637 DISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYT 696
D+++ NVL+ + +++DFG A+ + + + + E +
Sbjct: 164 DLAARNVLVTEDNVMKIADFGLARDI--------HHIDYYKKTTNGRLPVKWMAPEALFD 215
Query: 697 MKITEKCDVYSFGVLALEVIK---GKHPGDXXXXXXXXXXXINIE--FNAMLD-HRLPHP 750
T + DV+SFGVL E+ +PG + +E F + + HR+ P
Sbjct: 216 RIYTHQSDVWSFGVLLWEIFTLGGSPYPG------------VPVEELFKLLKEGHRMDKP 263
Query: 751 SLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
S E + + + C P+ RPT + + + L
Sbjct: 264 SNCTNELYMMMRD----CWHAVPSQRPTFKQLVEDL 295
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 81/172 (47%), Gaps = 12/172 (6%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+GKG V R K+P+G + A K N+ D ++ E + ++H NIV+ +
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTK--KLSARDHQKLEREARICRLLKHPNIVRLH 69
Query: 573 GFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPP 632
S ++V++ + G L + A E + + I + +++++ H
Sbjct: 70 DSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQILESVNHCH---LNG 123
Query: 633 IVHRDISSNNVLLDLEYEA---RVSDFGTAKLLKPNSSNWTELVGTFGYVAP 681
IVHRD+ N+LL + + +++DFG A ++ + W GT GY++P
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSP 175
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 124/300 (41%), Gaps = 59/300 (19%)
Query: 513 CIGK---GEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNI 568
C G+ E + + K +AVK +SD ++E++ + I +H+NI
Sbjct: 93 CFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGKHKNI 149
Query: 569 VKFYGFCSHVRHSFVVYEYINRGSLATVLS-------------NNFASEDFDWRKRMNVI 615
+ G C+ +V+ EY ++G+L L N E ++ ++
Sbjct: 150 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 209
Query: 616 TGVADALSYM-HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG 674
+A + Y+ C +HRD+++ NVL+ +++DFG A+ + N+ ++
Sbjct: 210 YQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDI--NNIDY----- 258
Query: 675 TFGYVAPAHGNIGLHL--AELAYTMKITEKCDVYSFGVLALEVIK---GKHPGDXXXXXX 729
Y +G + + E + T + DV+SFGVL E+ +PG
Sbjct: 259 ---YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG------- 308
Query: 730 XXXXXINIE--FNAMLD-HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
I +E F + + HR+ P+ E + + + C P+ RPT + + + L
Sbjct: 309 -----IPVEELFKLLKEGHRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQLVEDL 359
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 25/193 (12%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRG 591
++A+K N M ++ EFLNE + + ++V+ G S + + V+ E + RG
Sbjct: 50 RVAIKTVNEA---ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 106
Query: 592 SLATVL-------SNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVL 644
L + L NN K + + +AD ++Y++ + F VHRD+++ N +
Sbjct: 107 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCM 163
Query: 645 LDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL--AELAYTMKITEK 702
+ ++ ++ DFG + ++ T Y G + + E T
Sbjct: 164 VAEDFTVKIGDFGMTR----------DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTY 213
Query: 703 CDVYSFGVLALEV 715
DV+SFGV+ E+
Sbjct: 214 SDVWSFGVVLWEI 226
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 92/222 (41%), Gaps = 41/222 (18%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY- 572
IG+G ++VY+ L + + V S+++ F E + L ++H NIV+FY
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 573 GFCSHVRHS---FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVIT---------GVAD 620
+ S V+ +V E G+L T L KR V +
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYL------------KRFKVXKIKVLRSWCRQILK 140
Query: 621 ALSYMHHDCFPPIVHRDISSNNVLLDLEY-EARVSDFGTAKLLKPNSSNWTELVGTFGYV 679
L ++H PPI+HRD+ +N+ + ++ D G A L + + + ++GT +
Sbjct: 141 GLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK--AVIGTPEFX 197
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
AP Y K E DVY+FG LE ++P
Sbjct: 198 APE-----------XYEEKYDESVDVYAFGXCXLEXATSEYP 228
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 124/300 (41%), Gaps = 59/300 (19%)
Query: 513 CIGK---GEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNI 568
C G+ E + + K +AVK +SD ++E++ + I +H+NI
Sbjct: 36 CFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGKHKNI 92
Query: 569 VKFYGFCSHVRHSFVVYEYINRGSLATVLS-------------NNFASEDFDWRKRMNVI 615
+ G C+ +V+ EY ++G+L L N E ++ ++
Sbjct: 93 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 152
Query: 616 TGVADALSYM-HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG 674
+A + Y+ C +HRD+++ NVL+ +++DFG A+ + N+ ++
Sbjct: 153 YQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDI--NNIDY----- 201
Query: 675 TFGYVAPAHGNIGLHL--AELAYTMKITEKCDVYSFGVLALEVIK---GKHPGDXXXXXX 729
Y +G + + E + T + DV+SFGVL E+ +PG
Sbjct: 202 ---YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG------- 251
Query: 730 XXXXXINIE--FNAMLD-HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
I +E F + + HR+ P+ E + + + C P+ RPT + + + L
Sbjct: 252 -----IPVEELFKLLKEGHRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQLVEDL 302
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 124/300 (41%), Gaps = 59/300 (19%)
Query: 513 CIGK---GEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNI 568
C G+ E + + K +AVK +SD ++E++ + I +H+NI
Sbjct: 39 CFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGKHKNI 95
Query: 569 VKFYGFCSHVRHSFVVYEYINRGSLATVLS-------------NNFASEDFDWRKRMNVI 615
+ G C+ +V+ EY ++G+L L N E ++ ++
Sbjct: 96 INLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 155
Query: 616 TGVADALSYM-HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG 674
+A + Y+ C +HRD+++ NVL+ +++DFG A+ + N+ ++
Sbjct: 156 YQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDI--NNIDY----- 204
Query: 675 TFGYVAPAHGNIGLHL--AELAYTMKITEKCDVYSFGVLALEVIK---GKHPGDXXXXXX 729
Y +G + + E + T + DV+SFGVL E+ +PG
Sbjct: 205 ---YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG------- 254
Query: 730 XXXXXINIE--FNAMLD-HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
I +E F + + HR+ P+ E + + + C P+ RPT + + + L
Sbjct: 255 -----IPVEELFKLLKEGHRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQLVEDL 305
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 114/276 (41%), Gaps = 52/276 (18%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSFVVYEYINR 590
K+AVK S +SD ++E++ + I +H+NI+ G C+ +V+ EY ++
Sbjct: 54 KVAVKMLKSDATEKDLSD---LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 110
Query: 591 GSLATVLS-------------NNFASEDFDWRKRMNVITGVADALSYM-HHDCFPPIVHR 636
G+L L ++ E + ++ VA + Y+ C +HR
Sbjct: 111 GNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC----IHR 166
Query: 637 DISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYT 696
D+++ NVL+ + +++DFG A+ + + + + E +
Sbjct: 167 DLAARNVLVTEDNVMKIADFGLARDI--------HHIDYYKKTTNGRLPVKWMAPEALFD 218
Query: 697 MKITEKCDVYSFGVLALEVIK---GKHPGDXXXXXXXXXXXINIE--FNAMLD-HRLPHP 750
T + DV+SFGVL E+ +PG + +E F + + HR+ P
Sbjct: 219 RIYTHQSDVWSFGVLLWEIFTLGGSPYPG------------VPVEELFKLLKEGHRMDKP 266
Query: 751 SLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
S E + + + C P+ RPT + + + L
Sbjct: 267 SNCTNELYMMMRD----CWHAVPSQRPTFKQLVEDL 298
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 114/276 (41%), Gaps = 52/276 (18%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSFVVYEYINR 590
K+AVK S +SD ++E++ + I +H+NI+ G C+ +V+ EY ++
Sbjct: 62 KVAVKMLKSDATEKDLSD---LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 118
Query: 591 GSLATVLS-------------NNFASEDFDWRKRMNVITGVADALSYM-HHDCFPPIVHR 636
G+L L ++ E + ++ VA + Y+ C +HR
Sbjct: 119 GNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC----IHR 174
Query: 637 DISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYT 696
D+++ NVL+ + +++DFG A+ + + + + E +
Sbjct: 175 DLAARNVLVTEDNVMKIADFGLARDI--------HHIDYYKKTTNGRLPVKWMAPEALFD 226
Query: 697 MKITEKCDVYSFGVLALEVIK---GKHPGDXXXXXXXXXXXINIE--FNAMLD-HRLPHP 750
T + DV+SFGVL E+ +PG + +E F + + HR+ P
Sbjct: 227 RIYTHQSDVWSFGVLLWEIFTLGGSPYPG------------VPVEELFKLLKEGHRMDKP 274
Query: 751 SLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
S E + + + C P+ RPT + + + L
Sbjct: 275 SNCTNELYMMMRD----CWHAVPSQRPTFKQLVEDL 306
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 96/227 (42%), Gaps = 9/227 (3%)
Query: 496 IMYEEIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLN 555
+ +E+ + DF+ IG+G V K+ ++ K + + + + F
Sbjct: 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFRE 110
Query: 556 EIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVI 615
E L R I + + + ++V EY G L T+LS E +
Sbjct: 111 ERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSK--FGERIPAEMARFYL 168
Query: 616 TGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTEL-VG 674
+ A+ +H + VHRDI +N+LLD R++DFG+ L+ + + + + VG
Sbjct: 169 AEIVMAIDSVHRLGY---VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVG 225
Query: 675 TFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
T Y++P I + T +CD ++ GV A E+ G+ P
Sbjct: 226 TPDYLSP---EILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 114/276 (41%), Gaps = 52/276 (18%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSFVVYEYINR 590
K+AVK S +SD ++E++ + I +H+NI+ G C+ +V+ EY ++
Sbjct: 62 KVAVKMLKSDATEKDLSD---LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 118
Query: 591 GSLATVLS-------------NNFASEDFDWRKRMNVITGVADALSYM-HHDCFPPIVHR 636
G+L L ++ E + ++ VA + Y+ C +HR
Sbjct: 119 GNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC----IHR 174
Query: 637 DISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYT 696
D+++ NVL+ + +++DFG A+ + + + + E +
Sbjct: 175 DLAARNVLVTEDNVMKIADFGLARDI--------HHIDYYKKTTNGRLPVKWMAPEALFD 226
Query: 697 MKITEKCDVYSFGVLALEVIK---GKHPGDXXXXXXXXXXXINIE--FNAMLD-HRLPHP 750
T + DV+SFGVL E+ +PG + +E F + + HR+ P
Sbjct: 227 RIYTHQSDVWSFGVLLWEIFTLGGSPYPG------------VPVEELFKLLKEGHRMDKP 274
Query: 751 SLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
S E + + + C P+ RPT + + + L
Sbjct: 275 SNCTNELYMMMRD----CWHAVPSQRPTFKQLVEDL 306
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 113/275 (41%), Gaps = 50/275 (18%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSFVVYEYINR 590
K+AVK S +SD ++E++ + I +H+NI+ G C+ +V+ EY ++
Sbjct: 47 KVAVKMLKSDATEKDLSD---LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 103
Query: 591 GSLATVLS-------------NNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRD 637
G+L L ++ E + ++ VA + Y+ +HRD
Sbjct: 104 GNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRD 160
Query: 638 ISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTM 697
+++ NVL+ + +++DFG A+ + + + + E +
Sbjct: 161 LAARNVLVTEDNVMKIADFGLARDI--------HHIDYYKKTTNGRLPVKWMAPEALFDR 212
Query: 698 KITEKCDVYSFGVLALEVIK---GKHPGDXXXXXXXXXXXINIE--FNAMLD-HRLPHPS 751
T + DV+SFGVL E+ +PG + +E F + + HR+ PS
Sbjct: 213 IYTHQSDVWSFGVLLWEIFTLGGSPYPG------------VPVEELFKLLKEGHRMDKPS 260
Query: 752 LDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
E + + + C P+ RPT + + + L
Sbjct: 261 NCTNELYMMMRD----CWHAVPSQRPTFKQLVEDL 291
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 92/221 (41%), Gaps = 21/221 (9%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKI-AVKKFNSPFPNDQMSDQKEFLNEIKALTKIR 564
+DFD IG+G + V +L D+I A+K ND D E +
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDD-EDIDWVQTEKHVFEQAS 63
Query: 565 -HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALS 623
H +V + F V EY+N G L + + R I+ AL+
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL---ALN 120
Query: 624 YMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKL-LKPNSSNWTELVGTFGYVAPA 682
Y+H I++RD+ +NVLLD E +++D+G K L+P + + GT Y+AP
Sbjct: 121 YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNYIAP- 175
Query: 683 HGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGD 723
E+ D ++ GVL E++ G+ P D
Sbjct: 176 ---------EILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 113/275 (41%), Gaps = 50/275 (18%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSFVVYEYINR 590
K+AVK S +SD ++E++ + I +H+NI+ G C+ +V+ EY ++
Sbjct: 62 KVAVKMLKSDATEKDLSD---LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 118
Query: 591 GSLATVLS-------------NNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRD 637
G+L L ++ E + ++ VA + Y+ +HRD
Sbjct: 119 GNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRD 175
Query: 638 ISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTM 697
+++ NVL+ + +++DFG A+ + + + + E +
Sbjct: 176 LAARNVLVTEDNVMKIADFGLARDI--------HHIDYYKKTTNGRLPVKWMAPEALFDR 227
Query: 698 KITEKCDVYSFGVLALEVIK---GKHPGDXXXXXXXXXXXINIE--FNAMLD-HRLPHPS 751
T + DV+SFGVL E+ +PG + +E F + + HR+ PS
Sbjct: 228 IYTHQSDVWSFGVLLWEIFTLGGSPYPG------------VPVEELFKLLKEGHRMDKPS 275
Query: 752 LDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
E + + + C P+ RPT + + + L
Sbjct: 276 NCTNELYMMMRD----CWHAVPSQRPTFKQLVEDL 306
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 90/217 (41%), Gaps = 19/217 (8%)
Query: 507 DFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIR- 564
+F+ +GKG V A++ +GD AVK Q D + + E + L+ R
Sbjct: 24 NFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVIL-QDDDVECTMTEKRILSLARN 82
Query: 565 HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSY 624
H + + + F V E++N G L + S FD + + AL +
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQK---SRRFDEARARFYAAEIISALMF 139
Query: 625 MHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHG 684
+H I++RD+ +NVLLD E +++DFG K N GT Y+AP
Sbjct: 140 LHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAP--- 193
Query: 685 NIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
E+ M D ++ GVL E++ G P
Sbjct: 194 -------EILQEMLYGPAVDWWAMGVLLYEMLCGHAP 223
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 114/276 (41%), Gaps = 52/276 (18%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSFVVYEYINR 590
K+AVK S +SD ++E++ + I +H+NI+ G C+ +V+ EY ++
Sbjct: 55 KVAVKMLKSDATEKDLSD---LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 111
Query: 591 GSLATVLS-------------NNFASEDFDWRKRMNVITGVADALSYM-HHDCFPPIVHR 636
G+L L ++ E + ++ VA + Y+ C +HR
Sbjct: 112 GNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC----IHR 167
Query: 637 DISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYT 696
D+++ NVL+ + +++DFG A+ + + + + E +
Sbjct: 168 DLAARNVLVTEDNVMKIADFGLARDI--------HHIDYYKKTTNGRLPVKWMAPEALFD 219
Query: 697 MKITEKCDVYSFGVLALEVIK---GKHPGDXXXXXXXXXXXINIE--FNAMLD-HRLPHP 750
T + DV+SFGVL E+ +PG + +E F + + HR+ P
Sbjct: 220 RIYTHQSDVWSFGVLLWEIFTLGGSPYPG------------VPVEELFKLLKEGHRMDKP 267
Query: 751 SLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
S E + + + C P+ RPT + + + L
Sbjct: 268 SNCTNELYMMMRD----CWHAVPSQRPTFKQLVEDL 299
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 92/221 (41%), Gaps = 21/221 (9%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKI-AVKKFNSPFPNDQMSDQKEFLNEIKALTKIR 564
+DFD IG+G + V +L D+I A+K ND D E +
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDD-EDIDWVQTEKHVFEQAS 67
Query: 565 -HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALS 623
H +V + F V EY+N G L + + R I+ AL+
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL---ALN 124
Query: 624 YMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKL-LKPNSSNWTELVGTFGYVAPA 682
Y+H I++RD+ +NVLLD E +++D+G K L+P + + GT Y+AP
Sbjct: 125 YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNYIAP- 179
Query: 683 HGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGD 723
E+ D ++ GVL E++ G+ P D
Sbjct: 180 ---------EILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 115/289 (39%), Gaps = 43/289 (14%)
Query: 514 IGKGEHRSVYRA------KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRN 567
+G+G VY K + ++AVK N + + ++ EFLNE + +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE---SASLRERIEFLNEASVMKGFTCHH 81
Query: 568 IVKFYGFCSHVRHSFVVYEYINRGSLATVL-------SNNFASEDFDWRKRMNVITGVAD 620
+V+ G S + + VV E + G L + L NN ++ + + +AD
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 621 ALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFG--Y 678
++Y++ F VHRD+++ N ++ ++ ++ DFG + + G +
Sbjct: 142 GMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 679 VAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXXXXXXXXXINI 737
+AP G+ T D++SFGV+ E+ + P ++
Sbjct: 199 MAPESLKDGV----------FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG 248
Query: 738 EFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
+ L P + E++ +M +C PN RPT + LL
Sbjct: 249 GY-------LDQPD-NCPERVTDLMR---MCWQFNPNMRPTFLEIVNLL 286
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 92/221 (41%), Gaps = 21/221 (9%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKI-AVKKFNSPFPNDQMSDQKEFLNEIKALTKIR 564
+DFD IG+G + V +L D+I A+K ND D E +
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDD-EDIDWVQTEKHVFEQAS 78
Query: 565 -HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALS 623
H +V + F V EY+N G L + + R I+ AL+
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL---ALN 135
Query: 624 YMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKL-LKPNSSNWTELVGTFGYVAPA 682
Y+H I++RD+ +NVLLD E +++D+G K L+P + + GT Y+AP
Sbjct: 136 YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNYIAP- 190
Query: 683 HGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGD 723
E+ D ++ GVL E++ G+ P D
Sbjct: 191 ---------EILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 92/221 (41%), Gaps = 21/221 (9%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKI-AVKKFNSPFPNDQMSDQKEFLNEIKALTKIR 564
+DFD IG+G + V +L D+I A++ ND D E +
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDD-EDIDWVQTEKHVFEQAS 110
Query: 565 -HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALS 623
H +V + F V EY+N G L + + R I+ AL+
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL---ALN 167
Query: 624 YMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKL-LKPNSSNWTELVGTFGYVAPA 682
Y+H I++RD+ +NVLLD E +++D+G K L+P + T GT Y+AP
Sbjct: 168 YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST-FCGTPNYIAP- 222
Query: 683 HGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGD 723
E+ D ++ GVL E++ G+ P D
Sbjct: 223 ---------EILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 126/304 (41%), Gaps = 64/304 (21%)
Query: 514 IGKGEHRSVYRAKLPSGDK--------IAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-R 564
+G+G V A+ DK +AVK +SD ++E++ + I +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 99
Query: 565 HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLS-------------NNFASEDFDWRKR 611
H+NI+ G C+ +V+ EY ++G+L L N E ++
Sbjct: 100 HKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 612 MNVITGVADALSYM-HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWT 670
++ +A + Y+ C +HRD+++ NVL+ +++DFG A+ + N+ ++
Sbjct: 160 VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDI--NNIDY- 212
Query: 671 ELVGTFGYVAPAHGNIGLHL--AELAYTMKITEKCDVYSFGVLALEVIK---GKHPGDXX 725
Y +G + + E + T + DV+SFGVL E+ +PG
Sbjct: 213 -------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG--- 262
Query: 726 XXXXXXXXXINIE--FNAMLD-HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTV 782
I +E F + + HR+ P+ E + + + C P+ RPT + +
Sbjct: 263 ---------IPVEELFKLLKEGHRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQL 309
Query: 783 CQLL 786
+ L
Sbjct: 310 VEDL 313
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 84/193 (43%), Gaps = 25/193 (12%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRG 591
++A+K N M ++ EFLNE + + ++V+ G S + + V+ E + RG
Sbjct: 44 RVAIKTVNEA---ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 100
Query: 592 SLATVL-------SNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVL 644
L + L NN K + + +AD ++Y++ + F VHRD+++ N
Sbjct: 101 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCX 157
Query: 645 LDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL--AELAYTMKITEK 702
+ ++ ++ DFG + ++ T Y G + + E T
Sbjct: 158 VAEDFTVKIGDFGMTR----------DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTY 207
Query: 703 CDVYSFGVLALEV 715
DV+SFGV+ E+
Sbjct: 208 SDVWSFGVVLWEI 220
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 68/146 (46%), Gaps = 17/146 (11%)
Query: 618 VADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNS--SNWTELVGT 675
+ AL Y+H I+HRD+ N+LL+ + +++DFGTAK+L P S + VGT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXI 735
YV+P EL ++ D+++ G + +++ G P I
Sbjct: 198 AQYVSP----------ELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 247
Query: 736 NIEFNAMLDHRLPHPSLDVQEKLISI 761
+E++ + + D+ EKL+ +
Sbjct: 248 KLEYD--FPEKFFPKARDLVEKLLVL 271
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 122/302 (40%), Gaps = 60/302 (19%)
Query: 514 IGKGEHRSVYRAKLPSGDK--------IAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-R 564
+G+G V A+ DK +AVK +SD ++E++ + I +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 99
Query: 565 HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLS-------------NNFASEDFDWRKR 611
H+NI+ G C+ +V+ EY ++G+L L N E ++
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 612 MNVITGVADALSYM-HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWT 670
++ +A + Y+ C +HRD+++ NVL+ +++DFG A+ + +N
Sbjct: 160 VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR----DINNID 211
Query: 671 ELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK---GKHPGDXXXX 727
T P L + Y T + DV+SFGVL E+ +PG
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVY----THQSDVWSFGVLMWEIFTLGGSPYPG----- 262
Query: 728 XXXXXXXINIE--FNAMLD-HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
I +E F + + HR+ P+ E + + + C P+ RPT + + +
Sbjct: 263 -------IPVEELFKLLKEGHRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQLVE 311
Query: 785 LL 786
L
Sbjct: 312 DL 313
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 80/171 (46%), Gaps = 23/171 (13%)
Query: 555 NEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSL-ATVLSNNFASEDFDWRKRMN 613
NEI L KI+H NIV H ++V + ++ G L +L +E +
Sbjct: 55 NEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTE----KDASL 110
Query: 614 VITGVADALSYMHHDCFPPIVHRDISSNNVL-LDLEYEAR--VSDFGTAKLLKPNSSNWT 670
VI V A+ Y+H + IVHRD+ N+L L E ++ ++DFG +K+ + +
Sbjct: 111 VIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM--EQNGIMS 165
Query: 671 ELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
GT GYVAP LA+ Y+ + D +S GV+ ++ G P
Sbjct: 166 TACGTPGYVAPE------VLAQKPYSKAV----DCWSIGVITYILLCGYPP 206
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 77/176 (43%), Gaps = 23/176 (13%)
Query: 553 FLNEIKALTKIRHRNIVKFYGFCSHVRHS----FVVYEYINRGSLATVLSNNFASEDFDW 608
F E + + H IV Y + ++V EY++ +L ++
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTP 115
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
++ + VI AL++ H + I+HRD+ N+L+ +V DFG A+ + + ++
Sbjct: 116 KRAIEVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNS 172
Query: 669 WTE---LVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ ++GT Y++P E A + + DVYS G + EV+ G+ P
Sbjct: 173 VXQTAAVIGTAQYLSP----------EQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 126/307 (41%), Gaps = 70/307 (22%)
Query: 514 IGKGEHRSVYRAKLPSGDK--------IAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-R 564
+G+G V A+ DK +AVK +SD ++E++ + I +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 99
Query: 565 HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLS-------------NNFASEDFDWRKR 611
H+NI+ G C+ +V+ EY ++G+L L N E ++
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 612 MNVITGVADALSYM-HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK-----PN 665
++ +A + Y+ C +HRD+++ NVL+ +++DFG A+ + N
Sbjct: 160 VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKN 215
Query: 666 SSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK---GKHPG 722
++N V ++AP E + T + DV+SFGVL E+ +PG
Sbjct: 216 TTNGRLPV---KWMAP----------EALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
Query: 723 DXXXXXXXXXXXINIE--FNAMLD-HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTM 779
I +E F + + HR+ P+ E + + + C P+ RPT
Sbjct: 263 ------------IPVEELFKLLKEGHRMDKPANCTNELYMMMRD----CWHAVPSQRPTF 306
Query: 780 QTVCQLL 786
+ + + L
Sbjct: 307 KQLVEDL 313
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 122/302 (40%), Gaps = 60/302 (19%)
Query: 514 IGKGEHRSVYRAKLPSGDK--------IAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-R 564
+G+G V A+ DK +AVK +SD ++E++ + I +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 99
Query: 565 HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLS-------------NNFASEDFDWRKR 611
H+NI+ G C+ +V+ EY ++G+L L N E ++
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDL 159
Query: 612 MNVITGVADALSYM-HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWT 670
++ +A + Y+ C +HRD+++ NVL+ +++DFG A+ + +N
Sbjct: 160 VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR----DINNID 211
Query: 671 ELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK---GKHPGDXXXX 727
T P L + Y T + DV+SFGVL E+ +PG
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVY----THQSDVWSFGVLMWEIFTLGGSPYPG----- 262
Query: 728 XXXXXXXINIE--FNAMLD-HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
I +E F + + HR+ P+ E + + + C P+ RPT + + +
Sbjct: 263 -------IPVEELFKLLKEGHRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQLVE 311
Query: 785 LL 786
L
Sbjct: 312 DL 313
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 92/217 (42%), Gaps = 31/217 (14%)
Query: 514 IGKGEHRSVYRA------KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRN 567
+G+G VY K + ++AVK N + + ++ EFLNE + +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE---SASLRERIEFLNEASVMKGFTCHH 81
Query: 568 IVKFYGFCSHVRHSFVVYEYINRGSLATVL-------SNNFASEDFDWRKRMNVITGVAD 620
+V+ G S + + VV E + G L + L NN ++ + + +AD
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 621 ALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFG--Y 678
++Y++ F VHRD+++ N ++ ++ ++ DFG + + G +
Sbjct: 142 GMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 679 VAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV 715
+AP G+ T D++SFGV+ E+
Sbjct: 199 MAPESLKDGV----------FTTSSDMWSFGVVLWEI 225
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 92/217 (42%), Gaps = 31/217 (14%)
Query: 514 IGKGEHRSVYRA------KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRN 567
+G+G VY K + ++AVK N + + ++ EFLNE + +
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE---SASLRERIEFLNEASVMKGFTCHH 78
Query: 568 IVKFYGFCSHVRHSFVVYEYINRGSLATVL-------SNNFASEDFDWRKRMNVITGVAD 620
+V+ G S + + VV E + G L + L NN ++ + + +AD
Sbjct: 79 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 138
Query: 621 ALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFG--Y 678
++Y++ F VHRD+++ N ++ ++ ++ DFG + + G +
Sbjct: 139 GMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 195
Query: 679 VAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV 715
+AP G+ T D++SFGV+ E+
Sbjct: 196 MAPESLKDGV----------FTTSSDMWSFGVVLWEI 222
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 88/187 (47%), Gaps = 8/187 (4%)
Query: 497 MYEEIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKI-AVKKFNSPFPNDQMSD-QKEFL 554
M ++ R K ++ +G+G+ +VY+A+ + ++I A+KK ++ + L
Sbjct: 1 MALDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTAL 60
Query: 555 NEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV 614
EIK L ++ H NI+ H + +V++++ L ++ +N K +
Sbjct: 61 REIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYML 119
Query: 615 ITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG 674
+T L Y+H I+HRD+ NN+LLD +++DFG AK + + V
Sbjct: 120 MT--LQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV 174
Query: 675 TFGYVAP 681
T Y AP
Sbjct: 175 TRWYRAP 181
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 126/304 (41%), Gaps = 64/304 (21%)
Query: 514 IGKGEHRSVYRAKLPSGDK--------IAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-R 564
+G+G V A+ DK +AVK +SD ++E++ + I +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 99
Query: 565 HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLS-------------NNFASEDFDWRKR 611
H+NI+ G C+ +V+ EY ++G+L L N E ++
Sbjct: 100 HKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 612 MNVITGVADALSYM-HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWT 670
++ +A + Y+ C +HRD+++ NVL+ +++DFG A+ + N+ ++
Sbjct: 160 VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDI--NNIDY- 212
Query: 671 ELVGTFGYVAPAHGNIGLHL--AELAYTMKITEKCDVYSFGVLALEVIK---GKHPGDXX 725
Y +G + + E + T + DV+SFGVL E+ +PG
Sbjct: 213 -------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG--- 262
Query: 726 XXXXXXXXXINIE--FNAMLD-HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTV 782
I +E F + + HR+ P+ E + + + C P+ RPT + +
Sbjct: 263 ---------IPVEELFKLLKEGHRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQL 309
Query: 783 CQLL 786
+ L
Sbjct: 310 VEDL 313
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 121/304 (39%), Gaps = 57/304 (18%)
Query: 513 CIGKGEHRSVYRA-----KLPSG-DKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHR 566
+G+GE V +A K +G +AVK N S+ ++ L+E L ++ H
Sbjct: 30 TLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE---NASPSELRDLLSEFNVLKQVNHP 86
Query: 567 NIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNN-------------FASEDFDWRKRMN 613
+++K YG CS ++ EY GSL L + S D
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 614 VITGVADALSY-----MHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
+ G + ++ M + +VHRD+++ N+L+ + ++SDFG ++ + S
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 669 WTELVGTFGYVAPAHGNIGLHLA--ELAYTMKITEKCDVYSFGVLALEVIK---GKHPGD 723
V + G I + E + T + DV+SFGVL E++ +PG
Sbjct: 207 ----------VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256
Query: 724 XXXXXXXXXXXINIEFNAM-LDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTV 782
FN + HR+ P + E++ +M L C P+ RP +
Sbjct: 257 PPERL----------FNLLKTGHRMERPD-NCSEEMYRLM---LQCWKQEPDKRPVFADI 302
Query: 783 CQLL 786
+ L
Sbjct: 303 SKDL 306
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 121/304 (39%), Gaps = 57/304 (18%)
Query: 513 CIGKGEHRSVYRA-----KLPSG-DKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHR 566
+G+GE V +A K +G +AVK N S+ ++ L+E L ++ H
Sbjct: 30 TLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE---NASPSELRDLLSEFNVLKQVNHP 86
Query: 567 NIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNN-------------FASEDFDWRKRMN 613
+++K YG CS ++ EY GSL L + S D
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 614 VITGVADALSY-----MHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
+ G + ++ M + +VHRD+++ N+L+ + ++SDFG ++ + S
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 669 WTELVGTFGYVAPAHGNIGLHLA--ELAYTMKITEKCDVYSFGVLALEVIK---GKHPGD 723
V + G I + E + T + DV+SFGVL E++ +PG
Sbjct: 207 ----------VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256
Query: 724 XXXXXXXXXXXINIEFNAM-LDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTV 782
FN + HR+ P + E++ +M L C P+ RP +
Sbjct: 257 PPERL----------FNLLKTGHRMERPD-NCSEEMYRLM---LQCWKQEPDKRPVFADI 302
Query: 783 CQLL 786
+ L
Sbjct: 303 SKDL 306
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 108/278 (38%), Gaps = 55/278 (19%)
Query: 533 IAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSFVVYEYINRG 591
+AVK P+ +++++ ++E+K L+ + H NIV G C+ + V+ EY G
Sbjct: 56 VAVKMLK---PSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYG 112
Query: 592 SLATVLSNNFASEDFDWRKRMNVITG-----------------VADALSYM-HHDCFPPI 633
L L + F K I VA ++++ +C
Sbjct: 113 DLLNFLRRK--RDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC---- 166
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAEL 693
+HRD+++ N+LL ++ DFG A+ +K N SN+ GN L + +
Sbjct: 167 IHRDLAARNILLTHGRITKICDFGLARDIK-NDSNYV-----------VKGNARLPVKWM 214
Query: 694 A----YTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXXXXXXXXXINIEFNAMLDHRLP 748
A + T + DV+S+G+ E+ G P I F + P
Sbjct: 215 APESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAP 274
Query: 749 HPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
D+ + C D P RPT + + QL+
Sbjct: 275 AEMYDIMKT----------CWDADPLKRPTFKQIVQLI 302
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 114/274 (41%), Gaps = 46/274 (16%)
Query: 503 RRTKDFDAKYCIGKGEHRSVYRAK-LPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALT 561
+R +DF +G+G +V A+ L + + A+K + +++ + E K
Sbjct: 7 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIK----------ILEKRHIIKENKVPY 56
Query: 562 KIRHRNIVKFYGFCSHVRHSFVV---YEYINRGSLATVLSNNFASEDFDWRKRMN----- 613
R R+++ S + H F V + + + L LS E + +++
Sbjct: 57 VTRERDVM------SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET 110
Query: 614 ----VITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNS--S 667
+ AL Y+H I+HRD+ N+LL+ + +++DFGTAK+L P S +
Sbjct: 111 CTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 167
Query: 668 NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXX 727
VGT YV+P EL + D+++ G + +++ G P
Sbjct: 168 RANXFVGTAQYVSP----------ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 217
Query: 728 XXXXXXXINIEFNAMLDHRLPHPSLDVQEKLISI 761
I +E++ + + D+ EKL+ +
Sbjct: 218 YLIFQKIIKLEYD--FPEKFFPKARDLVEKLLVL 249
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 88/218 (40%), Gaps = 22/218 (10%)
Query: 508 FDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRN 567
F+ IGKG V + K+ K+ + + ++ + E++ + + H
Sbjct: 17 FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPF 76
Query: 568 IVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHH 627
+V + F+V + + G L L N F I + AL Y+ +
Sbjct: 77 LVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVH---FKEETVKLFICELVMALDYLQN 133
Query: 628 DCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAP----AH 683
I+HRD+ +N+LLD ++DF A +L P + T + GT Y+AP +
Sbjct: 134 Q---RIIHRDMKPDNILLDEHGHVHITDFNIAAML-PRETQITTMAGTKPYMAPEMFSSR 189
Query: 684 GNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
G A D +S GV A E+++G+ P
Sbjct: 190 KGAGYSFA-----------VDWWSLGVTAYELLRGRRP 216
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 618 VADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNS--SNWTELVGT 675
+ AL Y+H I+HRD+ N+LL+ + +++DFGTAK+L P S + VGT
Sbjct: 138 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXI 735
YV+P EL + D+++ G + +++ G P I
Sbjct: 195 AQYVSP----------ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 244
Query: 736 NIEFNAMLDHRLPHPSLDVQEKLISI 761
+E++ + + D+ EKL+ +
Sbjct: 245 KLEYD--FPEKFFPKARDLVEKLLVL 268
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 108/278 (38%), Gaps = 55/278 (19%)
Query: 533 IAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSFVVYEYINRG 591
+AVK P+ +++++ ++E+K L+ + H NIV G C+ + V+ EY G
Sbjct: 79 VAVKMLK---PSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYG 135
Query: 592 SLATVLSNNFASEDFDWRKRMNVITG-----------------VADALSYM-HHDCFPPI 633
L L + F K I VA ++++ +C
Sbjct: 136 DLLNFLRRK--RDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC---- 189
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAEL 693
+HRD+++ N+LL ++ DFG A+ +K N SN+ GN L + +
Sbjct: 190 IHRDLAARNILLTHGRITKICDFGLARDIK-NDSNYV-----------VKGNARLPVKWM 237
Query: 694 A----YTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXXXXXXXXXINIEFNAMLDHRLP 748
A + T + DV+S+G+ E+ G P I F + P
Sbjct: 238 APESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAP 297
Query: 749 HPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
D+ + C D P RPT + + QL+
Sbjct: 298 AEMYDIMKT----------CWDADPLKRPTFKQIVQLI 325
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 618 VADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNS--SNWTELVGT 675
+ AL Y+H I+HRD+ N+LL+ + +++DFGTAK+L P S + VGT
Sbjct: 142 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXI 735
YV+P EL + D+++ G + +++ G P I
Sbjct: 199 AQYVSP----------ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 248
Query: 736 NIEFNAMLDHRLPHPSLDVQEKLISI 761
+E++ + + D+ EKL+ +
Sbjct: 249 KLEYD--FPEKFFPKARDLVEKLLVL 272
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 618 VADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNS--SNWTELVGT 675
+ AL Y+H I+HRD+ N+LL+ + +++DFGTAK+L P S + VGT
Sbjct: 117 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXI 735
YV+P EL + D+++ G + +++ G P I
Sbjct: 174 AQYVSP----------ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 223
Query: 736 NIEFNAMLDHRLPHPSLDVQEKLISI 761
+E++ + + D+ EKL+ +
Sbjct: 224 KLEYD--FPEKFFPKARDLVEKLLVL 247
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 618 VADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNS--SNWTELVGT 675
+ AL Y+H I+HRD+ N+LL+ + +++DFGTAK+L P S + VGT
Sbjct: 118 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 174
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXI 735
YV+P EL + D+++ G + +++ G P I
Sbjct: 175 AQYVSP----------ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 224
Query: 736 NIEFNAMLDHRLPHPSLDVQEKLISI 761
+E++ + + D+ EKL+ +
Sbjct: 225 KLEYD--FPEKFFPKARDLVEKLLVL 248
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 108/278 (38%), Gaps = 55/278 (19%)
Query: 533 IAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSFVVYEYINRG 591
+AVK P+ +++++ ++E+K L+ + H NIV G C+ + V+ EY G
Sbjct: 79 VAVKMLK---PSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYG 135
Query: 592 SLATVLSNNFASEDFDWRKRMNVITG-----------------VADALSYM-HHDCFPPI 633
L L + F K I VA ++++ +C
Sbjct: 136 DLLNFLRRK--RDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC---- 189
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAEL 693
+HRD+++ N+LL ++ DFG A+ +K N SN+ GN L + +
Sbjct: 190 IHRDLAARNILLTHGRITKICDFGLARHIK-NDSNYV-----------VKGNARLPVKWM 237
Query: 694 A----YTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXXXXXXXXXINIEFNAMLDHRLP 748
A + T + DV+S+G+ E+ G P I F + P
Sbjct: 238 APESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAP 297
Query: 749 HPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
D+ + C D P RPT + + QL+
Sbjct: 298 AEMYDIMKT----------CWDADPLKRPTFKQIVQLI 325
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 618 VADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNS--SNWTELVGT 675
+ AL Y+H I+HRD+ N+LL+ + +++DFGTAK+L P S + VGT
Sbjct: 116 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 172
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXI 735
YV+P EL + D+++ G + +++ G P I
Sbjct: 173 AQYVSP----------ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 222
Query: 736 NIEFNAMLDHRLPHPSLDVQEKLISI 761
+E++ + + D+ EKL+ +
Sbjct: 223 KLEYD--FPEKFFPKARDLVEKLLVL 246
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 15/106 (14%)
Query: 618 VADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNS--SNWTELVGT 675
+ AL Y+H I+HRD+ N+LL+ + +++DFGTAK+L P S + VGT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
YV+P EL + D+++ G + +++ G P
Sbjct: 198 AQYVSP----------ELLTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 23/192 (11%)
Query: 529 SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV--VYE 586
+G+ +AVK + S K+ EI L + H +I+K+ G C + + V E
Sbjct: 59 TGEMVAVKALKADAGPQHRSGWKQ---EIDILRTLYHEHIIKYKGCCEDAGAASLQLVME 115
Query: 587 YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLD 646
Y+ GSL L + + + + + ++Y+H + +HRD+++ NVLLD
Sbjct: 116 YVPLGSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLHAQHY---IHRDLAARNVLLD 168
Query: 647 LEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN--IGLHLAELAYTMKITEKCD 704
+ ++ DFG AK + G Y G+ + + E K D
Sbjct: 169 NDRLVKIGDFGLAKAVPE---------GHEXYRVREDGDSPVFWYAPECLKEYKFYYASD 219
Query: 705 VYSFGVLALEVI 716
V+SFGV E++
Sbjct: 220 VWSFGVTLYELL 231
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 618 VADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNS--SNWTELVGT 675
+ AL Y+H I+HRD+ N+LL+ + +++DFGTAK+L P S + VGT
Sbjct: 146 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXI 735
YV+P EL + D+++ G + +++ G P I
Sbjct: 203 AQYVSP----------ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 252
Query: 736 NIEFNAMLDHRLPHPSLDVQEKLISI 761
+E++ + + D+ EKL+ +
Sbjct: 253 KLEYD--FPEKFFPKARDLVEKLLVL 276
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 79/172 (45%), Gaps = 12/172 (6%)
Query: 514 IGKGEHRSVYR-AKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+GKG V R K+ +G + A K N+ D ++ E + ++H NIV+ +
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTK--KLSARDHQKLEREARICRLLKHPNIVRLH 87
Query: 573 GFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPP 632
S H +++++ + G L + A E + + I + +A+ + H
Sbjct: 88 DSISEEGHHYLIFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEAVLHCHQ---MG 141
Query: 633 IVHRDISSNNVLLDLEYEA---RVSDFGTAKLLKPNSSNWTELVGTFGYVAP 681
+VHRD+ N+LL + + +++DFG A ++ W GT GY++P
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSP 193
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 618 VADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNS--SNWTELVGT 675
+ AL Y+H I+HRD+ N+LL+ + +++DFGTAK+L P S + VGT
Sbjct: 142 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXI 735
YV+P EL + D+++ G + +++ G P I
Sbjct: 199 AQYVSP----------ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 248
Query: 736 NIEFNAMLDHRLPHPSLDVQEKLISI 761
+E++ + + D+ EKL+ +
Sbjct: 249 KLEYD--FPEKFFPKARDLVEKLLVL 272
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 102/231 (44%), Gaps = 44/231 (19%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIR-HRNIVKF 571
+GKG + V+++ +G+ +AVKK F N +D + EI LT++ H NIV
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNS--TDAQRTFREIMILTELSGHENIVNL 74
Query: 572 YGF--CSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDC 629
+ R ++V++Y+ A + +N + V+ + + Y+H
Sbjct: 75 LNVLRADNDRDVYLVFDYMETDLHAVIRANILEPV-----HKQYVVYQLIKVIKYLHSGG 129
Query: 630 FPPIVHRDISSNNVLLDLEYEARVSDFGTAK--------------LLKPNSSNW------ 669
++HRD+ +N+LL+ E +V+DFG ++ + N+ N+
Sbjct: 130 ---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPI 186
Query: 670 -TELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGK 719
T+ V T Y AP L + K T+ D++S G + E++ GK
Sbjct: 187 LTDYVATRWYRAPEI---------LLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 618 VADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNS--SNWTELVGT 675
+ AL Y+H I+HRD+ N+LL+ + +++DFGTAK+L P S + VGT
Sbjct: 138 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXI 735
YV+P EL + D+++ G + +++ G P I
Sbjct: 195 AQYVSP----------ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 244
Query: 736 NIEFNAMLDHRLPHPSLDVQEKLISI 761
+E++ + + D+ EKL+ +
Sbjct: 245 KLEYD--FPEKFFPKARDLVEKLLVL 268
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 618 VADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNS--SNWTELVGT 675
+ AL Y+H I+HRD+ N+LL+ + +++DFGTAK+L P S + VGT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXI 735
YV+P EL + D+++ G + +++ G P I
Sbjct: 198 AQYVSP----------ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 247
Query: 736 NIEFNAMLDHRLPHPSLDVQEKLISI 761
+E++ + + D+ EKL+ +
Sbjct: 248 KLEYD--FPEKFFPKARDLVEKLLVL 271
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 124/291 (42%), Gaps = 50/291 (17%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAV-------KKFNSPFPNDQMSDQKEF 553
I + +F +G G +VY+ +P G+K+ + ++ SP N KE
Sbjct: 8 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN------KEI 61
Query: 554 LNEIKALTKIRHRNIVKFYGFC--SHVRHSFVVYEYINRGSLATVL---SNNFASEDFDW 608
L+E + + + ++ + G C S V+ ++ + + G L + +N S+
Sbjct: 62 LDEAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYL-- 116
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
+N +A+ ++Y+ +VHRD+++ NVL+ +++DFG AKLL
Sbjct: 117 ---LNWCVQIAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 170
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXX 727
+ G A +I LH T + DV+S+GV E++ G P D
Sbjct: 171 YHAEGGKVPIKWMALESI-LHRI-------YTHQSDVWSYGVTVWELMTFGSKPYDGIPA 222
Query: 728 XXXXXXXINIEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSR 776
E +++L+ RLP P + + + +++ ++ D P R
Sbjct: 223 S---------EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 264
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 618 VADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNS--SNWTELVGT 675
+ AL Y+H I+HRD+ N+LL+ + +++DFGTAK+L P S + VGT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXI 735
YV+P EL + D+++ G + +++ G P I
Sbjct: 198 AQYVSP----------ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 247
Query: 736 NIEFNAMLDHRLPHPSLDVQEKLISI 761
+E++ + + D+ EKL+ +
Sbjct: 248 KLEYD--FPEKFFPKARDLVEKLLVL 271
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 618 VADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNS--SNWTELVGT 675
+ AL Y+H I+HRD+ N+LL+ + +++DFGTAK+L P S + VGT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXI 735
YV+P EL + D+++ G + +++ G P I
Sbjct: 196 AQYVSP----------ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 245
Query: 736 NIEFNAMLDHRLPHPSLDVQEKLISI 761
+E++ + + D+ EKL+ +
Sbjct: 246 KLEYD--FPEKFFPKARDLVEKLLVL 269
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 618 VADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNS--SNWTELVGT 675
+ AL Y+H I+HRD+ N+LL+ + +++DFGTAK+L P S + VGT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXI 735
YV+P EL + D+++ G + +++ G P I
Sbjct: 196 AQYVSP----------ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 245
Query: 736 NIEFNAMLDHRLPHPSLDVQEKLISI 761
+E++ + + D+ EKL+ +
Sbjct: 246 KLEYD--FPEKFFPKARDLVEKLLVL 269
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 108/278 (38%), Gaps = 55/278 (19%)
Query: 533 IAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSFVVYEYINRG 591
+AVK P+ +++++ ++E+K L+ + H NIV G C+ + V+ EY G
Sbjct: 72 VAVKMLK---PSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYG 128
Query: 592 SLATVLSNNFASEDFDWRKRMNVITG-----------------VADALSYM-HHDCFPPI 633
L L + F K I VA ++++ +C
Sbjct: 129 DLLNFLRRK--RDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC---- 182
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAEL 693
+HRD+++ N+LL ++ DFG A+ +K N SN+ GN L + +
Sbjct: 183 IHRDLAARNILLTHGRITKICDFGLARDIK-NDSNYV-----------VKGNARLPVKWM 230
Query: 694 A----YTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXXXXXXXXXINIEFNAMLDHRLP 748
A + T + DV+S+G+ E+ G P I F + P
Sbjct: 231 APESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAP 290
Query: 749 HPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
D+ + C D P RPT + + QL+
Sbjct: 291 AEMYDIMKT----------CWDADPLKRPTFKQIVQLI 318
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 15/106 (14%)
Query: 618 VADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNS--SNWTELVGT 675
+ AL Y+H I+HRD+ N+LL+ + +++DFGTAK+L P S + VGT
Sbjct: 144 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
YV+P EL + D+++ G + +++ G P
Sbjct: 201 AQYVSP----------ELLTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 618 VADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNS--SNWTELVGT 675
+ AL Y+H I+HRD+ N+LL+ + +++DFGTAK+L P S + VGT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXI 735
YV+P EL + D+++ G + +++ G P I
Sbjct: 196 AQYVSP----------ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 245
Query: 736 NIEFNAMLDHRLPHPSLDVQEKLISI 761
+E++ + + D+ EKL+ +
Sbjct: 246 KLEYD--FPEKFFPKARDLVEKLLVL 269
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 108/278 (38%), Gaps = 55/278 (19%)
Query: 533 IAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSFVVYEYINRG 591
+AVK P+ +++++ ++E+K L+ + H NIV G C+ + V+ EY G
Sbjct: 74 VAVKMLK---PSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYG 130
Query: 592 SLATVLSNNFASEDFDWRKRMNVITG-----------------VADALSYM-HHDCFPPI 633
L L + F K I VA ++++ +C
Sbjct: 131 DLLNFLRRK--RDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC---- 184
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAEL 693
+HRD+++ N+LL ++ DFG A+ +K N SN+ GN L + +
Sbjct: 185 IHRDLAARNILLTHGRITKICDFGLARDIK-NDSNYV-----------VKGNARLPVKWM 232
Query: 694 A----YTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXXXXXXXXXINIEFNAMLDHRLP 748
A + T + DV+S+G+ E+ G P I F + P
Sbjct: 233 APESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAP 292
Query: 749 HPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
D+ + C D P RPT + + QL+
Sbjct: 293 AEMYDIMKT----------CWDADPLKRPTFKQIVQLI 320
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 83/190 (43%), Gaps = 27/190 (14%)
Query: 554 LNEIKALTKIR-HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRM 612
L EIK LT+ H N++++Y + R ++ E N V S N + E+ +K
Sbjct: 74 LMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEY 133
Query: 613 NVITGVADALSYMHHDCFPPIVHRDISSNNVLL--------DLEYEAR-----VSDFGTA 659
N I+ + S + H I+HRD+ N+L+ D + A +SDFG
Sbjct: 134 NPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 193
Query: 660 KLLKPNS----SNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV 715
K L N GT G+ AP L E + ++T D++S G + +
Sbjct: 194 KKLDSGQXXFRXNLNNPSGTSGWRAP-------ELLEESTKRRLTRSIDIFSMGCVFYYI 246
Query: 716 I-KGKHP-GD 723
+ KGKHP GD
Sbjct: 247 LSKGKHPFGD 256
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 12/172 (6%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
IGKG V R KL +G + A K N+ D ++ E + ++H NIV+ +
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTK--KLSARDHQKLEREARICRLLKHSNIVRLH 69
Query: 573 GFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPP 632
S ++V++ + G L + A E + + I + +A+ + H
Sbjct: 70 DSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEAVLHCHQ---MG 123
Query: 633 IVHRDISSNNVLLDLEYEA---RVSDFGTAKLLKPNSSNWTELVGTFGYVAP 681
+VHRD+ N+LL + + +++DFG A ++ + W GT GY++P
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSP 175
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 618 VADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNS--SNWTELVGT 675
+ AL Y+H I+HRD+ N+LL+ + +++DFGTAK+L P S + VGT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXI 735
YV+P EL + D+++ G + +++ G P I
Sbjct: 198 AQYVSP----------ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 247
Query: 736 NIEFNAMLDHRLPHPSLDVQEKLISI 761
+E++ + + D+ EKL+ +
Sbjct: 248 KLEYD--FPEKFFPKARDLVEKLLVL 271
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 15/106 (14%)
Query: 618 VADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNS--SNWTELVGT 675
+ AL Y+H I+HRD+ N+LL+ + +++DFGTAK+L P S + VGT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
YV+P EL + D+++ G + +++ G P
Sbjct: 198 AQYVSP----------ELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 618 VADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNS--SNWTELVGT 675
+ AL Y+H I+HRD+ N+LL+ + +++DFGTAK+L P S + VGT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXI 735
YV+P EL + D+++ G + +++ G P I
Sbjct: 196 AQYVSP----------ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 245
Query: 736 NIEFNAMLDHRLPHPSLDVQEKLISI 761
+E++ + + D+ EKL+ +
Sbjct: 246 KLEYD--FPEKFFPKARDLVEKLLVL 269
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 83/190 (43%), Gaps = 27/190 (14%)
Query: 554 LNEIKALTKIR-HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRM 612
L EIK LT+ H N++++Y + R ++ E N V S N + E+ +K
Sbjct: 74 LMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEY 133
Query: 613 NVITGVADALSYMHHDCFPPIVHRDISSNNVLL--------DLEYEAR-----VSDFGTA 659
N I+ + S + H I+HRD+ N+L+ D + A +SDFG
Sbjct: 134 NPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 193
Query: 660 KLLKPNS----SNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV 715
K L N GT G+ AP L E + ++T D++S G + +
Sbjct: 194 KKLDSGQXXFRXNLNNPSGTSGWRAP-------ELLEESTKRRLTRSIDIFSMGCVFYYI 246
Query: 716 I-KGKHP-GD 723
+ KGKHP GD
Sbjct: 247 LSKGKHPFGD 256
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 18/191 (9%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRG 591
++A+KK SPF + + + L EIK L + RH NI+ + YI +
Sbjct: 54 RVAIKKI-SPF--EHQTYXQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 110
Query: 592 SLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEA 651
+ T L ++ + + L Y+H ++HRD+ +N+LL+ +
Sbjct: 111 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDL 167
Query: 652 RVSDFGTAKLLKPNSSN---WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSF 708
++ DFG A++ P+ + TE V T Y AP + L YT I D++S
Sbjct: 168 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE-----IMLNSKGYTKSI----DIWSV 218
Query: 709 GVLALEVIKGK 719
G + E++ +
Sbjct: 219 GCILAEMLSNR 229
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 618 VADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNS--SNWTELVGT 675
+ AL Y+H I+HRD+ N+LL+ + +++DFGTAK+L P S + VGT
Sbjct: 123 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXI 735
YV+P EL + D+++ G + +++ G P I
Sbjct: 180 AQYVSP----------ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 229
Query: 736 NIEFNAMLDHRLPHPSLDVQEKLISI 761
+E++ + + D+ EKL+ +
Sbjct: 230 KLEYD--FPEKFFPKARDLVEKLLVL 253
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 93/217 (42%), Gaps = 31/217 (14%)
Query: 514 IGKGEHRSVYRA------KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRN 567
+G+G VY K + ++AVK N + + ++ EFLNE + +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE---SASLRERIEFLNEASVMKGFTCHH 81
Query: 568 IVKFYGFCSHVRHSFVVYEYINRGSLATVL-------SNNFASEDFDWRKRMNVITGVAD 620
+V+ G S + + VV E + G L + L NN ++ + + +AD
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 621 ALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFG--Y 678
++Y++ F VHRD+++ N ++ ++ ++ DFG + + + G +
Sbjct: 142 GMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRW 198
Query: 679 VAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV 715
+AP G+ T D++SFGV+ E+
Sbjct: 199 MAPESLKDGV----------FTTSSDMWSFGVVLWEI 225
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 123/291 (42%), Gaps = 50/291 (17%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAV-------KKFNSPFPNDQMSDQKEF 553
I + +F +G G +VY+ +P G+K+ + ++ SP N KE
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN------KEI 67
Query: 554 LNEIKALTKIRHRNIVKFYGFC--SHVRHSFVVYEYINRGSLATVL---SNNFASEDFDW 608
L+E + + + ++ + G C S V+ ++ + + G L + +N S+
Sbjct: 68 LDEAYVMASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQYL-- 122
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
+N +A ++Y+ +VHRD+++ NVL+ +++DFG AKLL
Sbjct: 123 ---LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 176
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXX 727
+ G A +I LH T + DV+S+GV E++ G P D
Sbjct: 177 YHAEGGKVPIKWMALESI-LHRI-------YTHQSDVWSYGVTVWELMTFGSKPYDGIPA 228
Query: 728 XXXXXXXINIEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSR 776
E +++L+ RLP P + + + +++ ++ D P R
Sbjct: 229 S---------EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 270
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 123/291 (42%), Gaps = 50/291 (17%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAV-------KKFNSPFPNDQMSDQKEF 553
I + +F +G G +VY+ +P G+K+ + ++ SP N KE
Sbjct: 15 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN------KEI 68
Query: 554 LNEIKALTKIRHRNIVKFYGFC--SHVRHSFVVYEYINRGSLATVL---SNNFASEDFDW 608
L+E + + + ++ + G C S V+ ++ + + G L + +N S+
Sbjct: 69 LDEAYVMASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQYL-- 123
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
+N +A ++Y+ +VHRD+++ NVL+ +++DFG AKLL
Sbjct: 124 ---LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 177
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXX 727
+ G A +I LH T + DV+S+GV E++ G P D
Sbjct: 178 YHAEGGKVPIKWMALESI-LHRI-------YTHQSDVWSYGVTVWELMTFGSKPYDGIPA 229
Query: 728 XXXXXXXINIEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSR 776
E +++L+ RLP P + + + +++ ++ D P R
Sbjct: 230 S---------EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 271
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 123/291 (42%), Gaps = 50/291 (17%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAV-------KKFNSPFPNDQMSDQKEF 553
I + +F +G G +VY+ +P G+K+ + ++ SP N KE
Sbjct: 12 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN------KEI 65
Query: 554 LNEIKALTKIRHRNIVKFYGFC--SHVRHSFVVYEYINRGSLATVL---SNNFASEDFDW 608
L+E + + + ++ + G C S V+ ++ + + G L + +N S+
Sbjct: 66 LDEAYVMASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGXLLDYVREHKDNIGSQYL-- 120
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
+N +A ++Y+ +VHRD+++ NVL+ +++DFG AKLL
Sbjct: 121 ---LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 174
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXX 727
+ G A +I LH T + DV+S+GV E++ G P D
Sbjct: 175 YHAEGGKVPIKWMALESI-LHRI-------YTHQSDVWSYGVTVWELMTFGSKPYDGIPA 226
Query: 728 XXXXXXXINIEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSR 776
E +++L+ RLP P + + + +++ ++ D P R
Sbjct: 227 S---------EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 268
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 98/227 (43%), Gaps = 36/227 (15%)
Query: 505 TKDFDAKYCIGKGEHRSVYRAK-LPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
+ DF K +G+G + V A P+G+ +A+KK P D+ L EIK L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE---PFDKPLFALRTLREIKILKHF 66
Query: 564 RHRNIVKFYGF-----CSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGV 618
+H NI+ + + +++ E + + L V+S S+D I
Sbjct: 67 KHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDD----HIQYFIYQT 121
Query: 619 ADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN---------- 668
A+ +H ++HRD+ +N+L++ + +V DFG A+++ ++++
Sbjct: 122 LRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV 715
TE V T Y AP + + K + DV+S G + E+
Sbjct: 179 MTEXVATRWYRAP---------EVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 123/291 (42%), Gaps = 50/291 (17%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAV-------KKFNSPFPNDQMSDQKEF 553
I + +F +G G +VY+ +P G+K+ + ++ SP N KE
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN------KEI 64
Query: 554 LNEIKALTKIRHRNIVKFYGFC--SHVRHSFVVYEYINRGSLATVL---SNNFASEDFDW 608
L+E + + + ++ + G C S V+ ++ + + G L + +N S+
Sbjct: 65 LDEAYVMASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQYL-- 119
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
+N +A ++Y+ +VHRD+++ NVL+ +++DFG AKLL
Sbjct: 120 ---LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXX 727
+ G A +I LH T + DV+S+GV E++ G P D
Sbjct: 174 YHAEGGKVPIKWMALESI-LHRI-------YTHQSDVWSYGVTVWELMTFGSKPYDGIPA 225
Query: 728 XXXXXXXINIEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSR 776
E +++L+ RLP P + + + +++ ++ D P R
Sbjct: 226 S---------EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 267
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 123/291 (42%), Gaps = 50/291 (17%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAV-------KKFNSPFPNDQMSDQKEF 553
I + +F +G G +VY+ +P G+K+ + ++ SP N KE
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN------KEI 66
Query: 554 LNEIKALTKIRHRNIVKFYGFC--SHVRHSFVVYEYINRGSLATVL---SNNFASEDFDW 608
L+E + + + ++ + G C S V+ ++ + + G L + +N S+
Sbjct: 67 LDEAYVMASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQYL-- 121
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
+N +A ++Y+ +VHRD+++ NVL+ +++DFG AKLL
Sbjct: 122 ---LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 175
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXX 727
+ G A +I LH T + DV+S+GV E++ G P D
Sbjct: 176 YHAEGGKVPIKWMALESI-LHRI-------YTHQSDVWSYGVTVWELMTFGSKPYDGIPA 227
Query: 728 XXXXXXXINIEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSR 776
E +++L+ RLP P + + + +++ ++ D P R
Sbjct: 228 S---------EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 269
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 83/174 (47%), Gaps = 19/174 (10%)
Query: 550 QKEFLN-EIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDW 608
QKE ++ EI + + ++V F+GF +VV E R SL + A + +
Sbjct: 69 QKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEA 128
Query: 609 RKRM-NVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSS 667
R M I GV Y+H++ ++HRD+ N+ L+ + + ++ DFG A ++ +
Sbjct: 129 RYFMRQTIQGV----QYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE 181
Query: 668 NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+L GT Y+AP L + ++ ++ D++S G + ++ GK P
Sbjct: 182 RKKDLCGTPNYIAPE------VLCKKGHSFEV----DIWSLGCILYTLLVGKPP 225
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 123/291 (42%), Gaps = 50/291 (17%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAV-------KKFNSPFPNDQMSDQKEF 553
I + +F +G G +VY+ +P G+K+ + ++ SP N KE
Sbjct: 12 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN------KEI 65
Query: 554 LNEIKALTKIRHRNIVKFYGFC--SHVRHSFVVYEYINRGSLATVL---SNNFASEDFDW 608
L+E + + + ++ + G C S V+ ++ + + G L + +N S+
Sbjct: 66 LDEAYVMASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQYL-- 120
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
+N +A ++Y+ +VHRD+++ NVL+ +++DFG AKLL
Sbjct: 121 ---LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 174
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXX 727
+ G A +I LH T + DV+S+GV E++ G P D
Sbjct: 175 YHAEGGKVPIKWMALESI-LHRI-------YTHQSDVWSYGVTVWELMTFGSKPYDGIPA 226
Query: 728 XXXXXXXINIEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSR 776
E +++L+ RLP P + + + +++ ++ D P R
Sbjct: 227 S---------EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 268
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 123/291 (42%), Gaps = 50/291 (17%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAV-------KKFNSPFPNDQMSDQKEF 553
I + +F +G G +VY+ +P G+K+ + ++ SP N KE
Sbjct: 18 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN------KEI 71
Query: 554 LNEIKALTKIRHRNIVKFYGFC--SHVRHSFVVYEYINRGSLATVL---SNNFASEDFDW 608
L+E + + + ++ + G C S V+ ++ + + G L + +N S+
Sbjct: 72 LDEAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYL-- 126
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
+N +A ++Y+ +VHRD+++ NVL+ +++DFG AKLL
Sbjct: 127 ---LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 180
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXX 727
+ G A +I LH T + DV+S+GV E++ G P D
Sbjct: 181 YHAEGGKVPIKWMALESI-LHRI-------YTHQSDVWSYGVTVWELMTFGSKPYDGIPA 232
Query: 728 XXXXXXXINIEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSR 776
E +++L+ RLP P + + + +++ ++ D P R
Sbjct: 233 S---------EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 274
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 98/227 (43%), Gaps = 36/227 (15%)
Query: 505 TKDFDAKYCIGKGEHRSVYRAK-LPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
+ DF K +G+G + V A P+G+ +A+KK P D+ L EIK L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE---PFDKPLFALRTLREIKILKHF 66
Query: 564 RHRNIVKFYGF-----CSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGV 618
+H NI+ + + +++ E + + L V+S S+D I
Sbjct: 67 KHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDD----HIQYFIYQT 121
Query: 619 ADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN---------- 668
A+ +H ++HRD+ +N+L++ + +V DFG A+++ ++++
Sbjct: 122 LRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV 715
TE V T Y AP + + K + DV+S G + E+
Sbjct: 179 MTEYVATRWYRAP---------EVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 123/291 (42%), Gaps = 50/291 (17%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAV-------KKFNSPFPNDQMSDQKEF 553
I + +F +G G +VY+ +P G+K+ + ++ SP N KE
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN------KEI 66
Query: 554 LNEIKALTKIRHRNIVKFYGFC--SHVRHSFVVYEYINRGSLATVL---SNNFASEDFDW 608
L+E + + + ++ + G C S V+ ++ + + G L + +N S+
Sbjct: 67 LDEAYVMASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQYL-- 121
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
+N +A ++Y+ +VHRD+++ NVL+ +++DFG AKLL
Sbjct: 122 ---LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 175
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXX 727
+ G A +I LH T + DV+S+GV E++ G P D
Sbjct: 176 YHAEGGKVPIKWMALESI-LHRI-------YTHQSDVWSYGVTVWELMTFGSKPYDGIPA 227
Query: 728 XXXXXXXINIEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSR 776
E +++L+ RLP P + + + +++ ++ D P R
Sbjct: 228 S---------EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 269
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 123/291 (42%), Gaps = 50/291 (17%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAV-------KKFNSPFPNDQMSDQKEF 553
I + +F +G G +VY+ +P G+K+ + ++ SP N KE
Sbjct: 18 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN------KEI 71
Query: 554 LNEIKALTKIRHRNIVKFYGFC--SHVRHSFVVYEYINRGSLATVL---SNNFASEDFDW 608
L+E + + + ++ + G C S V+ ++ + + G L + +N S+
Sbjct: 72 LDEAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYL-- 126
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
+N +A ++Y+ +VHRD+++ NVL+ +++DFG AKLL
Sbjct: 127 ---LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 180
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXX 727
+ G A +I LH T + DV+S+GV E++ G P D
Sbjct: 181 YHAEGGKVPIKWMALESI-LHRI-------YTHQSDVWSYGVTVWELMTFGSKPYDGIPA 232
Query: 728 XXXXXXXINIEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSR 776
E +++L+ RLP P + + + +++ ++ D P R
Sbjct: 233 S---------EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 274
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 123/291 (42%), Gaps = 50/291 (17%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAV-------KKFNSPFPNDQMSDQKEF 553
I + +F +G G +VY+ +P G+K+ + ++ SP N KE
Sbjct: 36 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN------KEI 89
Query: 554 LNEIKALTKIRHRNIVKFYGFC--SHVRHSFVVYEYINRGSLATVL---SNNFASEDFDW 608
L+E + + + ++ + G C S V+ ++ + + G L + +N S+
Sbjct: 90 LDEAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYL-- 144
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
+N +A ++Y+ +VHRD+++ NVL+ +++DFG AKLL
Sbjct: 145 ---LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 198
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXX 727
+ G A +I LH T + DV+S+GV E++ G P D
Sbjct: 199 YHAEGGKVPIKWMALESI-LHRI-------YTHQSDVWSYGVTVWELMTFGSKPYDGIPA 250
Query: 728 XXXXXXXINIEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSR 776
E +++L+ RLP P + + + +++ ++ D P R
Sbjct: 251 S---------EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 292
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 123/291 (42%), Gaps = 50/291 (17%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAV-------KKFNSPFPNDQMSDQKEF 553
I + +F +G G +VY+ +P G+K+ + ++ SP N KE
Sbjct: 15 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN------KEI 68
Query: 554 LNEIKALTKIRHRNIVKFYGFC--SHVRHSFVVYEYINRGSLATVL---SNNFASEDFDW 608
L+E + + + ++ + G C S V+ ++ + + G L + +N S+
Sbjct: 69 LDEAYVMASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQYL-- 123
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
+N +A ++Y+ +VHRD+++ NVL+ +++DFG AKLL
Sbjct: 124 ---LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 177
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXX 727
+ G A +I LH T + DV+S+GV E++ G P D
Sbjct: 178 YHAEGGKVPIKWMALESI-LHRI-------YTHQSDVWSYGVTVWELMTFGSKPYDGIPA 229
Query: 728 XXXXXXXINIEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSR 776
E +++L+ RLP P + + + +++ ++ D P R
Sbjct: 230 S---------EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 271
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 123/291 (42%), Gaps = 50/291 (17%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAV-------KKFNSPFPNDQMSDQKEF 553
I + +F +G G +VY+ +P G+K+ + ++ SP N KE
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN------KEI 67
Query: 554 LNEIKALTKIRHRNIVKFYGFC--SHVRHSFVVYEYINRGSLATVL---SNNFASEDFDW 608
L+E + + + ++ + G C S V+ ++ + + G L + +N S+
Sbjct: 68 LDEAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYL-- 122
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
+N +A ++Y+ +VHRD+++ NVL+ +++DFG AKLL
Sbjct: 123 ---LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 176
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXX 727
+ G A +I LH T + DV+S+GV E++ G P D
Sbjct: 177 YHAEGGKVPIKWMALESI-LHRI-------YTHQSDVWSYGVTVWELMTFGSKPYDGIPA 228
Query: 728 XXXXXXXINIEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSR 776
E +++L+ RLP P + + + +++ ++ D P R
Sbjct: 229 S---------EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 270
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 123/291 (42%), Gaps = 50/291 (17%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAV-------KKFNSPFPNDQMSDQKEF 553
I + +F +G G +VY+ +P G+K+ + ++ SP N KE
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN------KEI 64
Query: 554 LNEIKALTKIRHRNIVKFYGFC--SHVRHSFVVYEYINRGSLATVL---SNNFASEDFDW 608
L+E + + + ++ + G C S V+ ++ + + G L + +N S+
Sbjct: 65 LDEAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYL-- 119
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
+N +A ++Y+ +VHRD+++ NVL+ +++DFG AKLL
Sbjct: 120 ---LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 173
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXX 727
+ G A +I LH T + DV+S+GV E++ G P D
Sbjct: 174 YHAEGGKVPIKWMALESI-LHRI-------YTHQSDVWSYGVTVWELMTFGSKPYDGIPA 225
Query: 728 XXXXXXXINIEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSR 776
E +++L+ RLP P + + + +++ ++ D P R
Sbjct: 226 S---------EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 267
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 123/291 (42%), Gaps = 50/291 (17%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAV-------KKFNSPFPNDQMSDQKEF 553
I + +F +G G +VY+ +P G+K+ + ++ SP N KE
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN------KEI 66
Query: 554 LNEIKALTKIRHRNIVKFYGFC--SHVRHSFVVYEYINRGSLATVL---SNNFASEDFDW 608
L+E + + + ++ + G C S V+ ++ + + G L + +N S+
Sbjct: 67 LDEAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYL-- 121
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
+N +A ++Y+ +VHRD+++ NVL+ +++DFG AKLL
Sbjct: 122 ---LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 175
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXX 727
+ G A +I LH T + DV+S+GV E++ G P D
Sbjct: 176 YHAEGGKVPIKWMALESI-LHRI-------YTHQSDVWSYGVTVWELMTFGSKPYDGIPA 227
Query: 728 XXXXXXXINIEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSR 776
E +++L+ RLP P + + + +++ ++ D P R
Sbjct: 228 S---------EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 269
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 92/217 (42%), Gaps = 31/217 (14%)
Query: 514 IGKGEHRSVYRA------KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRN 567
+G+G VY K + ++AVK N + + ++ EFLNE + +
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE---SASLRERIEFLNEASVMKGFTCHH 80
Query: 568 IVKFYGFCSHVRHSFVVYEYINRGSLATVL-------SNNFASEDFDWRKRMNVITGVAD 620
+V+ G S + + VV E + G L + L NN ++ + + +AD
Sbjct: 81 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 140
Query: 621 ALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFG--Y 678
++Y++ F VHRD+++ N ++ ++ ++ DFG + + G +
Sbjct: 141 GMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 197
Query: 679 VAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV 715
+AP G+ T D++SFGV+ E+
Sbjct: 198 MAPESLKDGV----------FTTSSDMWSFGVVLWEI 224
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 93/194 (47%), Gaps = 40/194 (20%)
Query: 548 SDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNN---FAS 603
S+++ ++E+K +T++ H NIV G C+ ++++EY G L L + F+
Sbjct: 90 SEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSE 149
Query: 604 EDFDW--RKRM------NVIT---------GVADALSYMHHDCFPPIVHRDISSNNVLLD 646
++ ++ +KR+ NV+T VA + ++ F VHRD+++ NVL+
Sbjct: 150 DEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVT 206
Query: 647 LEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELA----YTMKITEK 702
++ DFG A+ + +S+ YV GN L + +A + T K
Sbjct: 207 HGKVVKICDFGLARDIMSDSN----------YV--VRGNARLPVKWMAPESLFEGIYTIK 254
Query: 703 CDVYSFGVLALEVI 716
DV+S+G+L E+
Sbjct: 255 SDVWSYGILLWEIF 268
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 123/291 (42%), Gaps = 50/291 (17%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAV-------KKFNSPFPNDQMSDQKEF 553
I + +F +G G +VY+ +P G+K+ + ++ SP N KE
Sbjct: 45 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKAN------KEI 98
Query: 554 LNEIKALTKIRHRNIVKFYGFC--SHVRHSFVVYEYINRGSLATVL---SNNFASEDFDW 608
L+E + + + ++ + G C S V+ ++ + + G L + +N S+
Sbjct: 99 LDEAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYL-- 153
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
+N +A ++Y+ +VHRD+++ NVL+ +++DFG AKLL
Sbjct: 154 ---LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 207
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXX 727
+ G A +I LH T + DV+S+GV E++ G P D
Sbjct: 208 YHAEGGKVPIKWMALESI-LHRI-------YTHQSDVWSYGVTVWELMTFGSKPYDGIPA 259
Query: 728 XXXXXXXINIEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSR 776
E +++L+ RLP P + + + +++ ++ D P R
Sbjct: 260 S---------EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 301
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 123/291 (42%), Gaps = 50/291 (17%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAV-------KKFNSPFPNDQMSDQKEF 553
I + +F +G G +VY+ +P G+K+ + ++ SP N KE
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN------KEI 64
Query: 554 LNEIKALTKIRHRNIVKFYGFC--SHVRHSFVVYEYINRGSLATVL---SNNFASEDFDW 608
L+E + + + ++ + G C S V+ ++ + + G L + +N S+
Sbjct: 65 LDEAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYL-- 119
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
+N +A ++Y+ +VHRD+++ NVL+ +++DFG AKLL
Sbjct: 120 ---LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXX 727
+ G A +I LH T + DV+S+GV E++ G P D
Sbjct: 174 YHAEGGKVPIKWMALESI-LHRI-------YTHQSDVWSYGVTVWELMTFGSKPYDGIPA 225
Query: 728 XXXXXXXINIEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSR 776
E +++L+ RLP P + + + +++ ++ D P R
Sbjct: 226 S---------EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 267
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 123/291 (42%), Gaps = 50/291 (17%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAV-------KKFNSPFPNDQMSDQKEF 553
I + +F +G G +VY+ +P G+K+ + ++ SP N KE
Sbjct: 17 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN------KEI 70
Query: 554 LNEIKALTKIRHRNIVKFYGFC--SHVRHSFVVYEYINRGSLATVL---SNNFASEDFDW 608
L+E + + + ++ + G C S V+ ++ + + G L + +N S+
Sbjct: 71 LDEAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYL-- 125
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
+N +A ++Y+ +VHRD+++ NVL+ +++DFG AKLL
Sbjct: 126 ---LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 179
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXX 727
+ G A +I LH T + DV+S+GV E++ G P D
Sbjct: 180 YHAEGGKVPIKWMALESI-LHRI-------YTHQSDVWSYGVTVWELMTFGSKPYDGIPA 231
Query: 728 XXXXXXXINIEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSR 776
E +++L+ RLP P + + + +++ ++ D P R
Sbjct: 232 S---------EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 273
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 120/300 (40%), Gaps = 50/300 (16%)
Query: 495 KIMYEEIIRRTKDFDAKYCIGKGEHRSVYRA-KLPSGDKI----AVKKFNSPFPNDQMSD 549
+I+ E ++R K +G G +VY+ +P G+ + A+K N
Sbjct: 33 RILKETELKRVK------VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNE---TTGPKA 83
Query: 550 QKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVL---SNNFASEDF 606
EF++E + + H ++V+ G C V + + G L + +N S+
Sbjct: 84 NVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVT-QLMPHGCLLEYVHEHKDNIGSQLL 142
Query: 607 DWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNS 666
+N +A + Y+ +VHRD+++ NVL+ +++DFG A+LL+ +
Sbjct: 143 -----LNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE 194
Query: 667 SNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXX 725
+ G I E + K T + DV+S+GV E++ G P D
Sbjct: 195 KEYNADGGKM--------PIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGI 246
Query: 726 XXXXXXXXXINIEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVC 783
E +L+ RLP P + I + V + C +SRP + +
Sbjct: 247 PTR---------EIPDLLEKGERLPQPPICT----IDVYMVMVKCWMIDADSRPKFKELA 293
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 123/291 (42%), Gaps = 50/291 (17%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAV-------KKFNSPFPNDQMSDQKEF 553
I + +F +G G +VY+ +P G+K+ + ++ SP N KE
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN------KEI 67
Query: 554 LNEIKALTKIRHRNIVKFYGFC--SHVRHSFVVYEYINRGSLATVL---SNNFASEDFDW 608
L+E + + + ++ + G C S V+ ++ + + G L + +N S+
Sbjct: 68 LDEAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYL-- 122
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
+N +A ++Y+ +VHRD+++ NVL+ +++DFG AKLL
Sbjct: 123 ---LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 176
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXX 727
+ G A +I LH T + DV+S+GV E++ G P D
Sbjct: 177 YHAEGGKVPIKWMALESI-LHRI-------YTHQSDVWSYGVTVWELMTFGSKPYDGIPA 228
Query: 728 XXXXXXXINIEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSR 776
E +++L+ RLP P + + + +++ ++ D P R
Sbjct: 229 S---------EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 270
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 123/291 (42%), Gaps = 50/291 (17%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAV-------KKFNSPFPNDQMSDQKEF 553
I + +F +G G +VY+ +P G+K+ + ++ SP N KE
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN------KEI 64
Query: 554 LNEIKALTKIRHRNIVKFYGFC--SHVRHSFVVYEYINRGSLATVL---SNNFASEDFDW 608
L+E + + + ++ + G C S V+ ++ + + G L + +N S+
Sbjct: 65 LDEAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGXLLDYVREHKDNIGSQYL-- 119
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
+N +A ++Y+ +VHRD+++ NVL+ +++DFG AKLL
Sbjct: 120 ---LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXX 727
+ G A +I LH T + DV+S+GV E++ G P D
Sbjct: 174 YHAEGGKVPIKWMALESI-LHRI-------YTHQSDVWSYGVTVWELMTFGSKPYDGIPA 225
Query: 728 XXXXXXXINIEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSR 776
E +++L+ RLP P + + + +++ ++ D P R
Sbjct: 226 S---------EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 267
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 103/237 (43%), Gaps = 27/237 (11%)
Query: 499 EEIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGD----KIAVKKFNSPFPNDQMSDQKEFL 554
E+++ + F +GKGE SV A+L D K+AVK + SD +EFL
Sbjct: 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIAS--SDIEEFL 73
Query: 555 NEIKALTKIRHRNIVKFYGFCSHVRHS------FVVYEYINRGSL-ATVLSNNFASEDFD 607
E + + H ++ K G R V+ ++ G L A +L++ F+
Sbjct: 74 REAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFN 133
Query: 608 W--RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPN 665
+ + + +A + Y+ F +HRD+++ N +L + V+DFG ++ K
Sbjct: 134 LPLQTLVRFMVDIACGMEYLSSRNF---IHRDLAARNCMLAEDMTVCVADFGLSR--KIY 188
Query: 666 SSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI-KGKHP 721
S ++ P LA+ YT+ DV++FGV E++ +G+ P
Sbjct: 189 SGDYYR--QGCASKLPVKWLALESLADNLYTV----HSDVWAFGVTMWEIMTRGQTP 239
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 18/191 (9%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRG 591
++A+KK SPF + + L EIK L + RH NI+ + YI +
Sbjct: 54 RVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 110
Query: 592 SLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEA 651
+ T L ++ + + L Y+H ++HRD+ +N+LL+ +
Sbjct: 111 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDL 167
Query: 652 RVSDFGTAKLLKPNSSN---WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSF 708
++ DFG A++ P+ + TE V T Y AP + L YT I D++S
Sbjct: 168 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE-----IMLNSKGYTKSI----DIWSV 218
Query: 709 GVLALEVIKGK 719
G + E++ +
Sbjct: 219 GCILAEMLSNR 229
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 122/303 (40%), Gaps = 56/303 (18%)
Query: 495 KIMYEEIIRRTKDFDAKYCIGKGEHRSVYRA-KLPSGDKI----AVKKFNS---PFPNDQ 546
+I+ E ++R K +G G +VY+ +P G+ + A+K N P N
Sbjct: 10 RILKETELKRVK------VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKAN-- 61
Query: 547 MSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVL---SNNFAS 603
EF++E + + H ++V+ G C V + + G L + +N S
Sbjct: 62 ----VEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVT-QLMPHGCLLEYVHEHKDNIGS 116
Query: 604 EDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK 663
+ +N +A + Y+ +VHRD+++ NVL+ +++DFG A+LL+
Sbjct: 117 QLL-----LNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLE 168
Query: 664 PNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPG 722
+ + G I E + K T + DV+S+GV E++ G P
Sbjct: 169 GDEKEYNADGGKM--------PIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPY 220
Query: 723 DXXXXXXXXXXXINIEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQ 780
D E +L+ RLP P + I + V + C +SRP +
Sbjct: 221 DGIPTR---------EIPDLLEKGERLPQPPICT----IDVYMVMVKCWMIDADSRPKFK 267
Query: 781 TVC 783
+
Sbjct: 268 ELA 270
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 18/191 (9%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRG 591
++A+KK SPF + + L EIK L + RH NI+ + YI +
Sbjct: 48 RVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 104
Query: 592 SLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEA 651
+ T L ++ + + L Y+H ++HRD+ +N+LL+ +
Sbjct: 105 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDL 161
Query: 652 RVSDFGTAKLLKPNSSN---WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSF 708
++ DFG A++ P+ + TE V T Y AP + L YT I D++S
Sbjct: 162 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE-----IMLNSKGYTKSI----DIWSV 212
Query: 709 GVLALEVIKGK 719
G + E++ +
Sbjct: 213 GCILAEMLSNR 223
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 18/191 (9%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRG 591
++A+KK SPF + + L EIK L + RH NI+ + YI +
Sbjct: 50 RVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 106
Query: 592 SLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEA 651
+ T L ++ + + L Y+H ++HRD+ +N+LL+ +
Sbjct: 107 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDL 163
Query: 652 RVSDFGTAKLLKPNSSN---WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSF 708
++ DFG A++ P+ + TE V T Y AP + L YT I D++S
Sbjct: 164 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE-----IMLNSKGYTKSI----DIWSV 214
Query: 709 GVLALEVIKGK 719
G + E++ +
Sbjct: 215 GCILAEMLSNR 225
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 83/174 (47%), Gaps = 19/174 (10%)
Query: 550 QKEFLN-EIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDW 608
QKE ++ EI + + ++V F+GF +VV E R SL + A + +
Sbjct: 85 QKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEA 144
Query: 609 RKRM-NVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSS 667
R M I GV Y+H++ ++HRD+ N+ L+ + + ++ DFG A ++ +
Sbjct: 145 RYFMRQTIQGV----QYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE 197
Query: 668 NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+L GT Y+AP L + ++ ++ D++S G + ++ GK P
Sbjct: 198 RKKDLCGTPNYIAPE------VLCKKGHSFEV----DIWSLGCILYTLLVGKPP 241
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 92/217 (42%), Gaps = 31/217 (14%)
Query: 514 IGKGEHRSVYRA------KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRN 567
+G+G VY K + ++AVK N + + ++ EFLNE + +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE---SASLRERIEFLNEASVMKGFTCHH 81
Query: 568 IVKFYGFCSHVRHSFVVYEYINRGSLATVL-------SNNFASEDFDWRKRMNVITGVAD 620
+V+ G S + + VV E + G L + L NN ++ + + +AD
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 621 ALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFG--Y 678
++Y++ F VHRD+++ N ++ ++ ++ DFG + + G +
Sbjct: 142 GMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 679 VAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV 715
+AP G+ T D++SFGV+ E+
Sbjct: 199 MAPESLKDGV----------FTTSSDMWSFGVVLWEI 225
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 18/191 (9%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRG 591
++A+KK SPF + + L EIK L + RH NI+ + YI +
Sbjct: 48 RVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 104
Query: 592 SLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEA 651
+ T L ++ + + L Y+H ++HRD+ +N+LL+ +
Sbjct: 105 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDL 161
Query: 652 RVSDFGTAKLLKPNSSN---WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSF 708
++ DFG A++ P+ + TE V T Y AP + L YT I D++S
Sbjct: 162 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE-----IMLNSKGYTKSI----DIWSV 212
Query: 709 GVLALEVIKGK 719
G + E++ +
Sbjct: 213 GCILAEMLSNR 223
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 18/191 (9%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRG 591
++A+KK SPF + + L EIK L + RH NI+ + YI +
Sbjct: 70 RVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 126
Query: 592 SLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEA 651
+ T L ++ + + L Y+H ++HRD+ +N+LL+ +
Sbjct: 127 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDL 183
Query: 652 RVSDFGTAKLLKPNSSN---WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSF 708
++ DFG A++ P+ + TE V T Y AP + L YT I D++S
Sbjct: 184 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE-----IMLNSKGYTKSI----DIWSV 234
Query: 709 GVLALEVIKGK 719
G + E++ +
Sbjct: 235 GCILAEMLSNR 245
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 18/191 (9%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRG 591
++A+KK SPF + + L EIK L + RH NI+ + YI +
Sbjct: 58 RVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 114
Query: 592 SLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEA 651
+ T L ++ + + L Y+H ++HRD+ +N+LL+ +
Sbjct: 115 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDL 171
Query: 652 RVSDFGTAKLLKPNSSN---WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSF 708
++ DFG A++ P+ + TE V T Y AP + L YT I D++S
Sbjct: 172 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE-----IMLNSKGYTKSI----DIWSV 222
Query: 709 GVLALEVIKGK 719
G + E++ +
Sbjct: 223 GCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 18/191 (9%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRG 591
++A+KK SPF + + L EIK L + RH NI+ + YI +
Sbjct: 50 RVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 106
Query: 592 SLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEA 651
+ T L ++ + + L Y+H ++HRD+ +N+LL+ +
Sbjct: 107 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDL 163
Query: 652 RVSDFGTAKLLKPNSSN---WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSF 708
++ DFG A++ P+ + TE V T Y AP + L YT I D++S
Sbjct: 164 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE-----IMLNSKGYTKSI----DIWSV 214
Query: 709 GVLALEVIKGK 719
G + E++ +
Sbjct: 215 GCILAEMLSNR 225
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 18/191 (9%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRG 591
++A+KK SPF + + L EIK L + RH NI+ + YI +
Sbjct: 55 RVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 111
Query: 592 SLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEA 651
+ T L ++ + + L Y+H ++HRD+ +N+LL+ +
Sbjct: 112 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDL 168
Query: 652 RVSDFGTAKLLKPNSSN---WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSF 708
++ DFG A++ P+ + TE V T Y AP + L YT I D++S
Sbjct: 169 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE-----IMLNSKGYTKSI----DIWSV 219
Query: 709 GVLALEVIKGK 719
G + E++ +
Sbjct: 220 GCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 18/191 (9%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRG 591
++A+KK SPF + + L EIK L + RH NI+ + YI +
Sbjct: 56 RVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 112
Query: 592 SLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEA 651
+ T L ++ + + L Y+H ++HRD+ +N+LL+ +
Sbjct: 113 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDL 169
Query: 652 RVSDFGTAKLLKPNSSN---WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSF 708
++ DFG A++ P+ + TE V T Y AP + L YT I D++S
Sbjct: 170 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE-----IMLNSKGYTKSI----DIWSV 220
Query: 709 GVLALEVIKGK 719
G + E++ +
Sbjct: 221 GCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 18/191 (9%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRG 591
++A+KK SPF + + L EIK L + RH NI+ + YI +
Sbjct: 47 RVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 103
Query: 592 SLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEA 651
+ T L ++ + + L Y+H ++HRD+ +N+LL+ +
Sbjct: 104 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDL 160
Query: 652 RVSDFGTAKLLKPNSSN---WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSF 708
++ DFG A++ P+ + TE V T Y AP + L YT I D++S
Sbjct: 161 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE-----IMLNSKGYTKSI----DIWSV 211
Query: 709 GVLALEVIKGK 719
G + E++ +
Sbjct: 212 GCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 18/191 (9%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRG 591
++A+KK SPF + + L EIK L + RH NI+ + YI +
Sbjct: 54 RVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 110
Query: 592 SLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEA 651
+ T L ++ + + L Y+H ++HRD+ +N+LL+ +
Sbjct: 111 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDL 167
Query: 652 RVSDFGTAKLLKPNSSN---WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSF 708
++ DFG A++ P+ + TE V T Y AP + L YT I D++S
Sbjct: 168 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE-----IMLNSKGYTKSI----DIWSV 218
Query: 709 GVLALEVIKGK 719
G + E++ +
Sbjct: 219 GCILAEMLSNR 229
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 18/191 (9%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRG 591
++A+KK SPF + + L EIK L + RH NI+ + YI +
Sbjct: 52 RVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 108
Query: 592 SLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEA 651
+ T L ++ + + L Y+H ++HRD+ +N+LL+ +
Sbjct: 109 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDL 165
Query: 652 RVSDFGTAKLLKPNSSN---WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSF 708
++ DFG A++ P+ + TE V T Y AP + L YT I D++S
Sbjct: 166 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE-----IMLNSKGYTKSI----DIWSV 216
Query: 709 GVLALEVIKGK 719
G + E++ +
Sbjct: 217 GCILAEMLSNR 227
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 105/279 (37%), Gaps = 31/279 (11%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKL--PSGDKIAVK-KFNSPFPNDQMSDQKEFLNEIKALTK 562
KD +G G V R + PSG ++V K P Q +F+ E+ A+
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 563 IRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADAL 622
+ HRN+++ YG V E GSL L + R V VA+ +
Sbjct: 78 LDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGM 134
Query: 623 SYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPA 682
Y+ F +HRD+++ N+LL ++ DFG + L N + YV
Sbjct: 135 GYLESKRF---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH---------YVMQE 182
Query: 683 HGNIGLHLA--ELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXXXXXXXXXINIEF 739
H + E T + D + FGV E+ G+ P I+ E
Sbjct: 183 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW-IGLNGSQILHKIDKE- 240
Query: 740 NAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPT 778
RLP P D + + ++M + C P RPT
Sbjct: 241 ----GERLPRPE-DCPQDIYNVM---VQCWAHKPEDRPT 271
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 123/291 (42%), Gaps = 50/291 (17%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAV-------KKFNSPFPNDQMSDQKEF 553
I + +F +G G +VY+ +P G+K+ + ++ SP N KE
Sbjct: 5 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN------KEI 58
Query: 554 LNEIKALTKIRHRNIVKFYGFC--SHVRHSFVVYEYINRGSLATVL---SNNFASEDFDW 608
L+E + + + ++ + G C S V+ ++ + + G L + +N S+
Sbjct: 59 LDEAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYL-- 113
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
+N +A ++Y+ +VHRD+++ NVL+ +++DFG AKLL
Sbjct: 114 ---LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 167
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXX 727
+ G A +I LH T + DV+S+GV E++ G P D
Sbjct: 168 YHAEGGKVPIKWMALESI-LHRI-------YTHQSDVWSYGVTVWELMTFGSKPYDGIPA 219
Query: 728 XXXXXXXINIEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSR 776
E +++L+ RLP P + + + +++ ++ D P R
Sbjct: 220 S---------EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 261
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 105/279 (37%), Gaps = 31/279 (11%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKL--PSGDKIAVK-KFNSPFPNDQMSDQKEFLNEIKALTK 562
KD +G G V R + PSG ++V K P Q +F+ E+ A+
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 563 IRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADAL 622
+ HRN+++ YG V E GSL L + R V VA+ +
Sbjct: 72 LDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGM 128
Query: 623 SYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPA 682
Y+ F +HRD+++ N+LL ++ DFG + L N + YV
Sbjct: 129 GYLESKRF---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH---------YVMQE 176
Query: 683 HGNIGLHLA--ELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXXXXXXXXXINIEF 739
H + E T + D + FGV E+ G+ P I+ E
Sbjct: 177 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW-IGLNGSQILHKIDKE- 234
Query: 740 NAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPT 778
RLP P D + + ++M + C P RPT
Sbjct: 235 ----GERLPRPE-DCPQDIYNVM---VQCWAHKPEDRPT 265
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 18/191 (9%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRG 591
++A+KK SPF + + L EIK L + RH NI+ + YI +
Sbjct: 50 RVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 106
Query: 592 SLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEA 651
+ T L ++ + + L Y+H ++HRD+ +N+LL+ +
Sbjct: 107 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDL 163
Query: 652 RVSDFGTAKLLKPNSSN---WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSF 708
++ DFG A++ P+ + TE V T Y AP + L YT I D++S
Sbjct: 164 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE-----IMLNSKGYTKSI----DIWSV 214
Query: 709 GVLALEVIKGK 719
G + E++ +
Sbjct: 215 GCILAEMLSNR 225
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 125/304 (41%), Gaps = 64/304 (21%)
Query: 514 IGKGEHRSVYRAKLPSGDK--------IAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-R 564
+G+G V A+ DK +AVK +SD ++E++ + I +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 99
Query: 565 HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLS-------------NNFASEDFDWRKR 611
H+NI+ G C+ +V+ Y ++G+L L N E ++
Sbjct: 100 HKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 612 MNVITGVADALSYM-HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWT 670
++ +A + Y+ C +HRD+++ NVL+ +++DFG A+ + N+ ++
Sbjct: 160 VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDI--NNIDY- 212
Query: 671 ELVGTFGYVAPAHGNIGLHL--AELAYTMKITEKCDVYSFGVLALEVIK---GKHPGDXX 725
Y +G + + E + T + DV+SFGVL E+ +PG
Sbjct: 213 -------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG--- 262
Query: 726 XXXXXXXXXINIE--FNAMLD-HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTV 782
I +E F + + HR+ P+ E + + + C P+ RPT + +
Sbjct: 263 ---------IPVEELFKLLKEGHRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQL 309
Query: 783 CQLL 786
+ L
Sbjct: 310 VEDL 313
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 122/291 (41%), Gaps = 50/291 (17%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAV-------KKFNSPFPNDQMSDQKEF 553
I + +F +G G +VY+ +P G+K+ + ++ SP N KE
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN------KEI 66
Query: 554 LNEIKALTKIRHRNIVKFYGFC--SHVRHSFVVYEYINRGSLATVL---SNNFASEDFDW 608
L+E + + + ++ + G C S V+ ++ + + G L + +N S+
Sbjct: 67 LDEAYVMASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQYL-- 121
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
+N +A ++Y+ +VHRD+++ NVL+ +++DFG AKLL
Sbjct: 122 ---LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 175
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXX 727
+ G A +I LH T + DV+S+GV E++ G P D
Sbjct: 176 YHAEGGKVPIKWMALESI-LHRI-------YTHQSDVWSYGVTVWELMTFGSKPYDGIPA 227
Query: 728 XXXXXXXINIEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSR 776
E +++L+ RLP P + + + + + ++ D P R
Sbjct: 228 S---------EISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFR 269
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 18/191 (9%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRG 591
++A+KK SPF + + L EIK L + RH NI+ + YI +
Sbjct: 50 RVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 106
Query: 592 SLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEA 651
+ T L ++ + + L Y+H ++HRD+ +N+LL+ +
Sbjct: 107 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDL 163
Query: 652 RVSDFGTAKLLKPNSSN---WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSF 708
++ DFG A++ P+ + TE V T Y AP + L YT I D++S
Sbjct: 164 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE-----IMLNSKGYTKSI----DIWSV 214
Query: 709 GVLALEVIKGK 719
G + E++ +
Sbjct: 215 GCILAEMLSNR 225
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 97/220 (44%), Gaps = 31/220 (14%)
Query: 514 IGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKF- 571
IG G VY+AKL SG+ +A+KK + D++ E++ + K+ H NIV+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 79
Query: 572 YGFCSHVRHSFVVY-----EYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
Y F S VVY +Y+ + A + + + +L+Y+H
Sbjct: 80 YFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEA-RVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
I HRDI N+LLD + ++ DFG+AK L N + + + Y AP
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPE--- 192
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGK--HPGD 723
L YT I DV+S G + E++ G+ PGD
Sbjct: 193 --LIFGATDYTSSI----DVWSAGCVLAELLLGQPIFPGD 226
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 105/279 (37%), Gaps = 31/279 (11%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKL--PSGDKIAVK-KFNSPFPNDQMSDQKEFLNEIKALTK 562
KD +G G V R + PSG ++V K P Q +F+ E+ A+
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 563 IRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADAL 622
+ HRN+++ YG V E GSL L + R V VA+ +
Sbjct: 72 LDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGM 128
Query: 623 SYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPA 682
Y+ F +HRD+++ N+LL ++ DFG + L N + YV
Sbjct: 129 GYLESKRF---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH---------YVMQE 176
Query: 683 HGNIGLHLA--ELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXXXXXXXXXINIEF 739
H + E T + D + FGV E+ G+ P I+ E
Sbjct: 177 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW-IGLNGSQILHKIDKE- 234
Query: 740 NAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPT 778
RLP P D + + ++M + C P RPT
Sbjct: 235 ----GERLPRPE-DCPQDIYNVM---VQCWAHKPEDRPT 265
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 18/191 (9%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRG 591
++A+KK SPF + + L EIK L + RH NI+ + YI +
Sbjct: 50 RVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 106
Query: 592 SLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEA 651
+ T L ++ + + L Y+H ++HRD+ +N+LL+ +
Sbjct: 107 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDL 163
Query: 652 RVSDFGTAKLLKPNSSN---WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSF 708
++ DFG A++ P+ + TE V T Y AP + L YT I D++S
Sbjct: 164 KIXDFGLARVADPDHDHTGFLTEYVATRWYRAPE-----IMLNSKGYTKSI----DIWSV 214
Query: 709 GVLALEVIKGK 719
G + E++ +
Sbjct: 215 GCILAEMLSNR 225
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 105/279 (37%), Gaps = 31/279 (11%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKL--PSGDKIAVK-KFNSPFPNDQMSDQKEFLNEIKALTK 562
KD +G G V R + PSG ++V K P Q +F+ E+ A+
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 563 IRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADAL 622
+ HRN+++ YG V E GSL L + R V VA+ +
Sbjct: 68 LDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGM 124
Query: 623 SYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPA 682
Y+ F +HRD+++ N+LL ++ DFG + L N + YV
Sbjct: 125 GYLESKRF---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH---------YVMQE 172
Query: 683 HGNIGLHLA--ELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXXXXXXXXXINIEF 739
H + E T + D + FGV E+ G+ P I+ E
Sbjct: 173 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW-IGLNGSQILHKIDKE- 230
Query: 740 NAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPT 778
RLP P D + + ++M + C P RPT
Sbjct: 231 ----GERLPRPE-DCPQDIYNVM---VQCWAHKPEDRPT 261
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 18/191 (9%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRG 591
++A+KK SPF + + L EIK L + RH NI+ + YI +
Sbjct: 54 RVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 110
Query: 592 SLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEA 651
+ T L + + + L Y+H ++HRD+ +N+LL+ +
Sbjct: 111 LMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDL 167
Query: 652 RVSDFGTAKLLKPNSSN---WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSF 708
++ DFG A++ P+ + TE V T Y AP + L YT I D++S
Sbjct: 168 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE-----IMLNSKGYTKSI----DIWSV 218
Query: 709 GVLALEVIKGK 719
G + E++ +
Sbjct: 219 GCILAEMLSNR 229
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 105/279 (37%), Gaps = 31/279 (11%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKL--PSGDKIAVK-KFNSPFPNDQMSDQKEFLNEIKALTK 562
KD +G G V R + PSG ++V K P Q +F+ E+ A+
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 563 IRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADAL 622
+ HRN+++ YG V E GSL L + R V VA+ +
Sbjct: 68 LDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGM 124
Query: 623 SYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPA 682
Y+ F +HRD+++ N+LL ++ DFG + L N + YV
Sbjct: 125 GYLESKRF---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH---------YVMQE 172
Query: 683 HGNIGLHLA--ELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXXXXXXXXXINIEF 739
H + E T + D + FGV E+ G+ P I+ E
Sbjct: 173 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW-IGLNGSQILHKIDKE- 230
Query: 740 NAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPT 778
RLP P D + + ++M + C P RPT
Sbjct: 231 ----GERLPRPE-DCPQDIYNVM---VQCWAHKPEDRPT 261
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 122/291 (41%), Gaps = 50/291 (17%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAV-------KKFNSPFPNDQMSDQKEF 553
I + +F +G G +VY+ +P G+K+ + ++ SP N KE
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN------KEI 66
Query: 554 LNEIKALTKIRHRNIVKFYGFC--SHVRHSFVVYEYINRGSLATVL---SNNFASEDFDW 608
L+E + + + ++ + G C S V+ ++ + + G L + +N S+
Sbjct: 67 LDEAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYL-- 121
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
+N +A ++Y+ +VHRD+++ NVL+ +++DFG AKLL
Sbjct: 122 ---LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE 175
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXX 727
+ G A +I LH T + DV+S+GV E++ G P D
Sbjct: 176 YHAEGGKVPIKWMALESI-LHRI-------YTHQSDVWSYGVTVWELMTFGSKPYDGIPA 227
Query: 728 XXXXXXXINIEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSR 776
E +++L+ RLP P + + + + + ++ D P R
Sbjct: 228 S---------EISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFR 269
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 28/212 (13%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV--- 569
+G G + SV A SG+K+A+KK + PF ++ + K E+ L ++H N++
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFA--KRAYRELLLLKHMQHENVIGLL 107
Query: 570 KFYGFCSHVR--HSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHH 627
+ S +R + F + + L ++ F+ E + ++ + L Y+H
Sbjct: 108 DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQY-----LVYQMLKGLKYIHS 162
Query: 628 DCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIG 687
+VHRD+ N+ ++ + E ++ DFG A + + T V T Y AP
Sbjct: 163 AG---VVHRDLKPGNLAVNEDCELKILDFGLA---RHADAEMTGYVVTRWYRAPE----- 211
Query: 688 LHLAELAYTMKITEKCDVYSFGVLALEVIKGK 719
+ L+ + Y + D++S G + E++ GK
Sbjct: 212 VILSWMHYNQTV----DIWSVGCIMAEMLTGK 239
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 22/206 (10%)
Query: 519 HRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHV 578
+ VYR + D +A+K + +D +E + E + + ++ + IV+ G C
Sbjct: 27 RQGVYRMRKKQID-VAIKVLKQ---GTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QA 81
Query: 579 RHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDI 638
+V E G L L E+ ++ V+ + Y+ F VHRD+
Sbjct: 82 EALMLVMEMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEKNF---VHRDL 136
Query: 639 SSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGL--HLAELAYT 696
++ NVLL + A++SDFG +K L + S Y A + G L + E
Sbjct: 137 AARNVLLVNRHYAKISDFGLSKALGADDSY---------YTARSAGKWPLKWYAPECINF 187
Query: 697 MKITEKCDVYSFGVLALEVIK-GKHP 721
K + + DV+S+GV E + G+ P
Sbjct: 188 RKFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 96/218 (44%), Gaps = 18/218 (8%)
Query: 505 TKDFDAKYCIGKGEHRSVYRAK-LPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
+ DF K +G+G + V A P+G+ +A+KK P D+ L EIK L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE---PFDKPLFALRTLREIKILKHF 66
Query: 564 RHRNIVKFYGF-----CSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGV 618
+H NI+ + + +++ E + + L V+S S+D I
Sbjct: 67 KHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDD----HIQYFIYQT 121
Query: 619 ADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGY 678
A+ +H ++HRD+ +N+L++ + +V DFG A+++ ++++ +E G
Sbjct: 122 LRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 679 VAPAHGNIGLHLAELAYT-MKITEKCDVYSFGVLALEV 715
+ E+ T K + DV+S G + E+
Sbjct: 179 MVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 95/219 (43%), Gaps = 29/219 (13%)
Query: 508 FDAKYCIGKGEHRSVYRAKLPSGDK-IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHR 566
F+ + +G+G VYR K K A+K + D+K EI L ++ H
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLK------KTVDKKIVRTEIGVLLRLSHP 108
Query: 567 NIVKFYGFCSHVRHSFVVYEYINRGSL-ATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
NI+K +V E + G L ++ + SE R + + + +A++Y+
Sbjct: 109 NIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSE----RDAADAVKQILEAVAYL 164
Query: 626 HHDCFPPIVHRDISSNNVLLDL---EYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPA 682
H + IVHRD+ N+L + +++DFG +K+++ T + GT GY AP
Sbjct: 165 HENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT-VCGTPGYCAP- 219
Query: 683 HGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
E+ + D++S G++ ++ G P
Sbjct: 220 ---------EILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 122/291 (41%), Gaps = 50/291 (17%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAV-------KKFNSPFPNDQMSDQKEF 553
I + +F +G G +VY+ +P G+K+ + ++ SP N KE
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN------KEI 64
Query: 554 LNEIKALTKIRHRNIVKFYGFC--SHVRHSFVVYEYINRGSLATVL---SNNFASEDFDW 608
L+E + + + ++ + G C S V+ ++ + + G L + +N S+
Sbjct: 65 LDEAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYL-- 119
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
+N +A ++Y+ +VHRD+++ NVL+ +++DFG AKLL
Sbjct: 120 ---LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXX 727
+ G A +I LH T + DV+S+GV E++ G P D
Sbjct: 174 YHAEGGKVPIKWMALESI-LHRI-------YTHQSDVWSYGVTVWELMTFGSKPYDGIPA 225
Query: 728 XXXXXXXINIEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSR 776
E +++L+ RLP P + + + + + ++ D P R
Sbjct: 226 S---------EISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFR 267
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 125/304 (41%), Gaps = 64/304 (21%)
Query: 514 IGKGEHRSVYRAKLPSGDK--------IAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-R 564
+G+G V A+ DK +AVK +SD ++E++ + I +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD---LVSEMEMMKMIGK 99
Query: 565 HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLS-------------NNFASEDFDWRKR 611
H+NI+ G C+ +V+ Y ++G+L L N E ++
Sbjct: 100 HKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 612 MNVITGVADALSYM-HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWT 670
++ +A + Y+ C +HRD+++ NVL+ +++DFG A+ + N+ ++
Sbjct: 160 VSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDI--NNIDY- 212
Query: 671 ELVGTFGYVAPAHGNIGLHL--AELAYTMKITEKCDVYSFGVLALEVIK---GKHPGDXX 725
Y +G + + E + T + DV+SFGVL E+ +PG
Sbjct: 213 -------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG--- 262
Query: 726 XXXXXXXXXINIE--FNAMLD-HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTV 782
I +E F + + HR+ P+ E + + + C P+ RPT + +
Sbjct: 263 ---------IPVEELFKLLKEGHRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQL 309
Query: 783 CQLL 786
+ L
Sbjct: 310 VEDL 313
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 23/210 (10%)
Query: 514 IGKGEHRSV---YRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVK 570
+G G + SV Y A+L K+AVKK + PF + + + E++ L ++H N++
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQS--LIHARRTYRELRLLKHLKHENVIG 91
Query: 571 FYG-FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDC 629
F Y+ + L+N S+ ++ + L Y+H
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAG 151
Query: 630 FPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLH 689
I+HRD+ +NV ++ + E R+ DFG A + T V T Y AP I L+
Sbjct: 152 ---IIHRDLKPSNVAVNEDSELRILDFGLA---RQADEEMTGYVATRWYRAP---EIMLN 202
Query: 690 LAELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E+++GK
Sbjct: 203 W------MHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 122/291 (41%), Gaps = 50/291 (17%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAV-------KKFNSPFPNDQMSDQKEF 553
I + +F +G G +VY+ +P G+K+ + ++ SP N KE
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN------KEI 67
Query: 554 LNEIKALTKIRHRNIVKFYGFC--SHVRHSFVVYEYINRGSLATVL---SNNFASEDFDW 608
L+E + + + ++ + G C S V+ ++ + + G L + +N S+
Sbjct: 68 LDEAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYL-- 122
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
+N +A ++Y+ +VHRD+++ NVL+ +++DFG AKLL
Sbjct: 123 ---LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 176
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXX 727
+ G A +I LH T + DV+S+GV E++ G P D
Sbjct: 177 YHAEGGKVPIKWMALESI-LHRI-------YTHQSDVWSYGVTVWELMTFGSKPYDGIPA 228
Query: 728 XXXXXXXINIEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSR 776
E +++L+ RLP P + + + + + ++ D P R
Sbjct: 229 S---------EISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFR 270
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 102/220 (46%), Gaps = 23/220 (10%)
Query: 504 RTKDFDAKYCIGKGEHRSVYR-AKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTK 562
+ DF+ +G G V++ + PSG +A K + + + + + + E++ L +
Sbjct: 7 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHE 63
Query: 563 IRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSN-NFASEDFDWRKRMNVITGVADA 621
IV FYG + E+++ GSL VL E + + VI G
Sbjct: 64 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG---- 119
Query: 622 LSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAP 681
L+Y+ I+HRD+ +N+L++ E ++ DFG + L +N E VGT Y++P
Sbjct: 120 LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMAN--EFVGTRSYMSP 175
Query: 682 AHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
G H Y++ + D++S G+ +E+ G++P
Sbjct: 176 ERLQ-GTH-----YSV----QSDIWSMGLSLVEMAVGRYP 205
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 83/190 (43%), Gaps = 23/190 (12%)
Query: 554 LNEIKALTKIR-HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRM 612
L EIK LT+ H N++++Y + R ++ E N V S N + E+ +K
Sbjct: 56 LMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEY 115
Query: 613 NVITGVADALSYMHHDCFPPIVHRDISSNNVLL--------DLEYEAR-----VSDFGTA 659
N I+ + S + H I+HRD+ N+L+ D + A +SDFG
Sbjct: 116 NPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 175
Query: 660 KLLKPNSS----NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV 715
K L S N GT G+ AP + L ++T D++S G + +
Sbjct: 176 KKLDSGQSSFRTNLNNPSGTSGWRAP---ELLEESNNLQTKRRLTRSIDIFSMGCVFYYI 232
Query: 716 I-KGKHP-GD 723
+ KGKHP GD
Sbjct: 233 LSKGKHPFGD 242
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 83/191 (43%), Gaps = 18/191 (9%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRG 591
++A++K SPF + + L EIK L + RH NI+ + YI +
Sbjct: 54 RVAIRKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 110
Query: 592 SLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEA 651
+ T L ++ + + L Y+H ++HRD+ +N+LL+ +
Sbjct: 111 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDL 167
Query: 652 RVSDFGTAKLLKPNSSN---WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSF 708
++ DFG A++ P+ + TE V T Y AP + L YT I D++S
Sbjct: 168 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE-----IMLNSKGYTKSI----DIWSV 218
Query: 709 GVLALEVIKGK 719
G + E++ +
Sbjct: 219 GCILAEMLSNR 229
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 19/174 (10%)
Query: 550 QKEFLN-EIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDW 608
QKE ++ EI + + ++V F+GF +VV E R SL + A + +
Sbjct: 85 QKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEA 144
Query: 609 RKRM-NVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSS 667
R M I GV Y+H++ ++HRD+ N+ L+ + + ++ DFG A ++ +
Sbjct: 145 RYFMRQTIQGV----QYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE 197
Query: 668 NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
L GT Y+AP L + ++ ++ D++S G + ++ GK P
Sbjct: 198 RKKXLCGTPNYIAPE------VLCKKGHSFEV----DIWSLGCILYTLLVGKPP 241
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 122/291 (41%), Gaps = 50/291 (17%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAV-------KKFNSPFPNDQMSDQKEF 553
I + +F +G G +VY+ +P G+K+ + ++ SP N KE
Sbjct: 21 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN------KEI 74
Query: 554 LNEIKALTKIRHRNIVKFYGFC--SHVRHSFVVYEYINRGSLATVL---SNNFASEDFDW 608
L+E + + + ++ + G C S V+ ++ + + G L + +N S+
Sbjct: 75 LDEAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYL-- 129
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
+N +A ++Y+ +VHRD+++ NVL+ +++DFG AKLL
Sbjct: 130 ---LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 183
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXX 727
+ G A +I LH T + DV+S+GV E++ G P D
Sbjct: 184 YHAEGGKVPIKWMALESI-LHRI-------YTHQSDVWSYGVTVWELMTFGSKPYDGIPA 235
Query: 728 XXXXXXXINIEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSR 776
E +++L+ RLP P + + + + + ++ D P R
Sbjct: 236 S---------EISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFR 277
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 19/174 (10%)
Query: 550 QKEFLN-EIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDW 608
QKE ++ EI + + ++V F+GF +VV E R SL + A + +
Sbjct: 85 QKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEA 144
Query: 609 RKRM-NVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSS 667
R M I GV Y+H++ ++HRD+ N+ L+ + + ++ DFG A ++ +
Sbjct: 145 RYFMRQTIQGV----QYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE 197
Query: 668 NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
L GT Y+AP L + ++ ++ D++S G + ++ GK P
Sbjct: 198 RKKTLCGTPNYIAPE------VLCKKGHSFEV----DIWSLGCILYTLLVGKPP 241
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 115/289 (39%), Gaps = 43/289 (14%)
Query: 514 IGKGEHRSVYRA------KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRN 567
+G+G VY K + ++AVK N + + ++ EFLNE + +
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE---SASLRERIEFLNEASVMKGFTCHH 82
Query: 568 IVKFYGFCSHVRHSFVVYEYINRGSLATVL-------SNNFASEDFDWRKRMNVITGVAD 620
+V+ G S + + VV E + G L + L NN ++ + + +AD
Sbjct: 83 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 142
Query: 621 ALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFG--Y 678
++Y++ F VHR++++ N ++ ++ ++ DFG + + G +
Sbjct: 143 GMAYLNAKKF---VHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 199
Query: 679 VAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXXXXXXXXXINI 737
+AP G+ T D++SFGV+ E+ + P ++
Sbjct: 200 MAPESLKDGV----------FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG 249
Query: 738 EFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
+ L P + E++ +M +C PN RPT + LL
Sbjct: 250 GY-------LDQPD-NCPERVTDLMR---MCWQFNPNMRPTFLEIVNLL 287
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 115/289 (39%), Gaps = 43/289 (14%)
Query: 514 IGKGEHRSVYRA------KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRN 567
+G+G VY K + ++AVK N + + ++ EFLNE + +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE---SASLRERIEFLNEASVMKGFTCHH 81
Query: 568 IVKFYGFCSHVRHSFVVYEYINRGSLATVL-------SNNFASEDFDWRKRMNVITGVAD 620
+V+ G S + + VV E + G L + L NN ++ + + +AD
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 621 ALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFG--Y 678
++Y++ F VHR++++ N ++ ++ ++ DFG + + G +
Sbjct: 142 GMAYLNAKKF---VHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 679 VAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXXXXXXXXXINI 737
+AP G+ T D++SFGV+ E+ + P ++
Sbjct: 199 MAPESLKDGV----------FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG 248
Query: 738 EFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
+ L P + E++ +M +C PN RPT + LL
Sbjct: 249 GY-------LDQPD-NCPERVTDLMR---MCWQFNPNMRPTFLEIVNLL 286
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 23/192 (11%)
Query: 529 SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHV--RHSFVVYE 586
+G+ +AVK + S K+ EI L + H +I+K+ G C + +V E
Sbjct: 42 TGEMVAVKALKADCGPQHRSGWKQ---EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVME 98
Query: 587 YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLD 646
Y+ GSL L + + + + + ++Y+H + +HR++++ NVLLD
Sbjct: 99 YVPLGSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLHSQHY---IHRNLAARNVLLD 151
Query: 647 LEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN--IGLHLAELAYTMKITEKCD 704
+ ++ DFG AK + P + Y G+ + + E K D
Sbjct: 152 NDRLVKIGDFGLAKAV-PEGHEY--------YRVREDGDSPVFWYAPECLKEYKFYYASD 202
Query: 705 VYSFGVLALEVI 716
V+SFGV E++
Sbjct: 203 VWSFGVTLYELL 214
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 28/196 (14%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFC-----SHVRHSFVVYE 586
++A+KK SPF + + L EIK L + RH NI+ ++ ++V
Sbjct: 70 RVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLV-T 125
Query: 587 YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLD 646
++ L +L S D ++ G L Y+H ++HRD+ +N+LL+
Sbjct: 126 HLMGADLYKLLKTQHLSNDHICYFLYQILRG----LKYIHS---ANVLHRDLKPSNLLLN 178
Query: 647 LEYEARVSDFGTAKLLKPNSSN---WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKC 703
+ ++ DFG A++ P+ + TE V T Y AP + L YT I
Sbjct: 179 TTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE-----IMLNSKGYTKSI---- 229
Query: 704 DVYSFGVLALEVIKGK 719
D++S G + E++ +
Sbjct: 230 DIWSVGCILAEMLSNR 245
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 25/191 (13%)
Query: 535 VKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSL- 593
+ K S P +Q+ EI+ L + H NI+K + + ++V E G L
Sbjct: 55 INKDRSQVPMEQIE------AEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELL 108
Query: 594 ATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLD---LEYE 650
++S + ++ + +AL+Y H +VH+D+ N+L
Sbjct: 109 ERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSP 165
Query: 651 ARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGV 710
++ DFG A+L K + + T GT Y+AP + +T KCD++S GV
Sbjct: 166 IKIIDFGLAELFKSDEHS-TNAAGTALYMAPE-----------VFKRDVTFKCDIWSAGV 213
Query: 711 LALEVIKGKHP 721
+ ++ G P
Sbjct: 214 VMYFLLTGCLP 224
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 24/198 (12%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRG 591
++A+KK SPF + + L EI+ L + RH N++ + YI +
Sbjct: 70 RVAIKKI-SPFEHQTYCQRT--LREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQD 126
Query: 592 SLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEA 651
+ T L S+ + + L Y+H ++HRD+ +N+L++ +
Sbjct: 127 LMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLINTTCDL 183
Query: 652 RVSDFGTAKLLKPNSSN---WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSF 708
++ DFG A++ P + TE V T Y AP + L YT I D++S
Sbjct: 184 KICDFGLARIADPEHDHTGFLTEXVATRWYRAPE-----IMLNSKGYTKSI----DIWSV 234
Query: 709 GVLALEVIK------GKH 720
G + E++ GKH
Sbjct: 235 GCILAEMLSNRPIFPGKH 252
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 18/191 (9%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRG 591
++A+KK SPF + + L EIK L RH NI+ + YI +
Sbjct: 52 RVAIKKI-SPFEHQTYCQRT--LREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQD 108
Query: 592 SLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEA 651
+ T L ++ + + L Y+H ++HRD+ +N+LL+ +
Sbjct: 109 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDL 165
Query: 652 RVSDFGTAKLLKPNSSN---WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSF 708
++ DFG A++ P+ + TE V T Y AP + L YT I D++S
Sbjct: 166 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE-----IMLNSKGYTKSI----DIWSV 216
Query: 709 GVLALEVIKGK 719
G + E++ +
Sbjct: 217 GCILAEMLSNR 227
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 23/192 (11%)
Query: 529 SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHV--RHSFVVYE 586
+G+ +AVK + S K+ EI L + H +I+K+ G C + +V E
Sbjct: 42 TGEMVAVKALKADCGPQHRSGWKQ---EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVME 98
Query: 587 YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLD 646
Y+ GSL L + + + + + ++Y+H + +HR++++ NVLLD
Sbjct: 99 YVPLGSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLHAQHY---IHRNLAARNVLLD 151
Query: 647 LEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN--IGLHLAELAYTMKITEKCD 704
+ ++ DFG AK + P + Y G+ + + E K D
Sbjct: 152 NDRLVKIGDFGLAKAV-PEGHEY--------YRVREDGDSPVFWYAPECLKEYKFYYASD 202
Query: 705 VYSFGVLALEVI 716
V+SFGV E++
Sbjct: 203 VWSFGVTLYELL 214
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 18/191 (9%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRG 591
++A+KK SPF + + L EIK L RH NI+ + YI +
Sbjct: 52 RVAIKKI-SPFEHQTYCQRT--LREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQD 108
Query: 592 SLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEA 651
+ T L ++ + + L Y+H ++HRD+ +N+LL+ +
Sbjct: 109 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTSDL 165
Query: 652 RVSDFGTAKLLKPNSSN---WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSF 708
++ DFG A++ P+ + TE V T Y AP + L YT I D++S
Sbjct: 166 KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE-----IMLNSKGYTKSI----DIWSV 216
Query: 709 GVLALEVIKGK 719
G + E++ +
Sbjct: 217 GCILAEMLSNR 227
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 86/222 (38%), Gaps = 41/222 (18%)
Query: 514 IGKGEHRSVYRAKL------PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRN 567
+G G VY ++ PS ++AVK + D+ +FL E ++K H+N
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSE---QDELDFLMEALIISKFNHQN 109
Query: 568 IVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFA----SEDFDWRKRMNVITGVADALS 623
IV+ G F++ E + G L + L ++V +A
Sbjct: 110 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 169
Query: 624 YMHHDCFPPIVHRDISSNNVLLDLEYEARVS---DFGTAKLLKPNSSNWTELVGTFGYVA 680
Y+ + F +HRDI++ N LL RV+ DFG A+ + Y A
Sbjct: 170 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDI---------------YRA 211
Query: 681 PAHGNIGLHLAELAYTMK-------ITEKCDVYSFGVLALEV 715
+ G + + + T K D +SFGVL E+
Sbjct: 212 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 28/212 (13%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV--- 569
+G G + SV A SG+K+A+KK + PF ++ + K E+ L ++H N++
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFA--KRAYRELLLLKHMQHENVIGLL 89
Query: 570 KFYGFCSHVR--HSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHH 627
+ S +R + F + + L ++ F+ E + ++ + L Y+H
Sbjct: 90 DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQY-----LVYQMLKGLKYIHS 144
Query: 628 DCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIG 687
+VHRD+ N+ ++ + E ++ DFG A + + T V T Y AP
Sbjct: 145 AG---VVHRDLKPGNLAVNEDCELKILDFGLA---RHADAEMTGYVVTRWYRAPE----- 193
Query: 688 LHLAELAYTMKITEKCDVYSFGVLALEVIKGK 719
+ L+ + Y + D++S G + E++ GK
Sbjct: 194 VILSWMHYNQTV----DIWSVGCIMAEMLTGK 221
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 22/205 (10%)
Query: 520 RSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVR 579
+ VYR + D +A+K + +D +E + E + + ++ + IV+ G C
Sbjct: 354 QGVYRMRKKQID-VAIKVLKQ---GTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAE 408
Query: 580 HSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDIS 639
+V E G L L E+ ++ V+ + Y+ F VHR+++
Sbjct: 409 ALMLVMEMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEKNF---VHRNLA 463
Query: 640 SNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGL--HLAELAYTM 697
+ NVLL + A++SDFG +K L + S Y A + G L + E
Sbjct: 464 ARNVLLVNRHYAKISDFGLSKALGADDSY---------YTARSAGKWPLKWYAPECINFR 514
Query: 698 KITEKCDVYSFGVLALEVIK-GKHP 721
K + + DV+S+GV E + G+ P
Sbjct: 515 KFSSRSDVWSYGVTMWEALSYGQKP 539
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 122/291 (41%), Gaps = 50/291 (17%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAV-------KKFNSPFPNDQMSDQKEF 553
I + +F + G +VY+ +P G+K+ + ++ SP N KE
Sbjct: 18 ILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN------KEI 71
Query: 554 LNEIKALTKIRHRNIVKFYGFC--SHVRHSFVVYEYINRGSLATVL---SNNFASEDFDW 608
L+E + + + ++ + G C S V+ ++ + + G L + +N S+
Sbjct: 72 LDEAYVMASVDNPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQYL-- 126
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
+N +A ++Y+ +VHRD+++ NVL+ +++DFG AKLL
Sbjct: 127 ---LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 180
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXX 727
+ G A +I LH T + DV+S+GV E++ G P D
Sbjct: 181 YHAEGGKVPIKWMALESI-LHRI-------YTHQSDVWSYGVTVWELMTFGSKPYDGIPA 232
Query: 728 XXXXXXXINIEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSR 776
E +++L+ RLP P + + + +++ ++ D P R
Sbjct: 233 S---------EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 274
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 74/177 (41%), Gaps = 24/177 (13%)
Query: 549 DQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNN---FASED 605
+++E E+ L ++H NIV++ ++V +Y G L ++ ED
Sbjct: 66 EREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQED 125
Query: 606 --FDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK 663
DW + AL ++H I+HRDI S N+ L + ++ DFG A++L
Sbjct: 126 QILDW------FVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLN 176
Query: 664 PNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKH 720
+GT Y++P E+ K D+++ G + E+ KH
Sbjct: 177 STVELARACIGTPYYLSP----------EICENKPYNNKSDIWALGCVLYELCTLKH 223
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 560 LTKIRHRNIVKF-YGFCSHVRHSFVVYEYINRGSLATVLSNN--FASEDFDWRKRMNVIT 616
L + H +VK Y F + + +++ +++ G L T LS F ED + +
Sbjct: 84 LADVNHPFVVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTEEDVKF-----YLA 137
Query: 617 GVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTF 676
+A L ++H I++RD+ N+LLD E +++DFG +K + GT
Sbjct: 138 ELALGLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTV 194
Query: 677 GYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
Y+AP N H + D +S+GVL E++ G P
Sbjct: 195 EYMAPEVVNRQGH----------SHSADWWSYGVLMFEMLTGSLP 229
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 19/171 (11%)
Query: 552 EFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSN-NFASEDFDWRK 610
+ + E++ L + IV FYG + E+++ GSL VL E+ +
Sbjct: 60 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKV 119
Query: 611 RMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWT 670
+ V+ G+A L H I+HRD+ +N+L++ E ++ DFG + L + +N
Sbjct: 120 SIAVLRGLA-YLREKHQ-----IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN-- 171
Query: 671 ELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
VGT Y+AP G H Y++ + D++S G+ +E+ G++P
Sbjct: 172 SFVGTRSYMAPERLQ-GTH-----YSV----QSDIWSMGLSLVELAVGRYP 212
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 85/185 (45%), Gaps = 16/185 (8%)
Query: 503 RRTKDFDAKYCIGKGEHRSVYRA--KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKAL 560
R T D+ +GKG V R K P+ + A K N+ D ++ E +
Sbjct: 28 RFTDDYQLFEELGKGAFSVVRRCVKKTPT-QEYAAKIINTK--KLSARDHQKLEREARIC 84
Query: 561 TKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVAD 620
++H NIV+ + S ++V++ + G L + A E + + I + +
Sbjct: 85 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIHQILE 141
Query: 621 ALSYMH-HDCFPPIVHRDISSNNVLLDLEYEA---RVSDFGTAKLLKPNSSNWTELVGTF 676
+++++H HD IVHRD+ N+LL + + +++DFG A ++ W GT
Sbjct: 142 SVNHIHQHD----IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTP 197
Query: 677 GYVAP 681
GY++P
Sbjct: 198 GYLSP 202
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 105/280 (37%), Gaps = 33/280 (11%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKL--PSGDKIAVK-KFNSPFPNDQMSDQKEFLNEIKALTK 562
KD +G G V R + PSG ++V K P Q +F+ E+ A+
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 563 IRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADAL 622
+ HRN+++ YG V E GSL L + R V VA+ +
Sbjct: 78 LDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGM 134
Query: 623 SYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWT---ELVGTFGYV 679
Y+ F +HRD+++ N+LL ++ DFG + L N + F +
Sbjct: 135 GYLESKRF---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWC 191
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXXXXXXXXXINIE 738
AP E T + D + FGV E+ G+ P I+ E
Sbjct: 192 AP----------ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW-IGLNGSQILHKIDKE 240
Query: 739 FNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPT 778
RLP P D + + ++M + C P RPT
Sbjct: 241 -----GERLPRPE-DCPQDIYNVM---VQCWAHKPEDRPT 271
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 18/191 (9%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRG 591
++A+KK SPF + + L EIK L + RH NI+ + YI +
Sbjct: 54 RVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 110
Query: 592 SLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEA 651
+ T L ++ + + L Y+H ++HRD+ +N+LL+ +
Sbjct: 111 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDL 167
Query: 652 RVSDFGTAKLLKPNSSN---WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSF 708
++ DFG A++ P+ + E V T Y AP + L YT I D++S
Sbjct: 168 KICDFGLARVADPDHDHTGFLXEXVATRWYRAPE-----IMLNSKGYTKSI----DIWSV 218
Query: 709 GVLALEVIKGK 719
G + E++ +
Sbjct: 219 GCILAEMLSNR 229
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 122/291 (41%), Gaps = 50/291 (17%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAV-------KKFNSPFPNDQMSDQKEF 553
I + +F + G +VY+ +P G+K+ + ++ SP N KE
Sbjct: 18 ILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN------KEI 71
Query: 554 LNEIKALTKIRHRNIVKFYGFC--SHVRHSFVVYEYINRGSLATVL---SNNFASEDFDW 608
L+E + + + ++ + G C S V+ ++ + + G L + +N S+
Sbjct: 72 LDEAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYL-- 126
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
+N +A ++Y+ +VHRD+++ NVL+ +++DFG AKLL
Sbjct: 127 ---LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 180
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXX 727
+ G A +I LH T + DV+S+GV E++ G P D
Sbjct: 181 YHAEGGKVPIKWMALESI-LHRI-------YTHQSDVWSYGVTVWELMTFGSKPYDGIPA 232
Query: 728 XXXXXXXINIEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSR 776
E +++L+ RLP P + + + +++ ++ D P R
Sbjct: 233 S---------EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 274
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 18/191 (9%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRG 591
++A+KK SPF + + L EIK L + RH NI+ + YI +
Sbjct: 55 RVAIKKI-SPFEHQTYCQRT--LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 111
Query: 592 SLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEA 651
+ T L ++ + + L Y+H ++HRD+ +N+LL+ +
Sbjct: 112 LMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDL 168
Query: 652 RVSDFGTAKLLKPNSSN---WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSF 708
++ DFG A++ P+ + E V T Y AP + L YT I D++S
Sbjct: 169 KICDFGLARVADPDHDHTGFLXEXVATRWYRAPE-----IMLNSKGYTKSI----DIWSV 219
Query: 709 GVLALEVIKGK 719
G + E++ +
Sbjct: 220 GCILAEMLSNR 230
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 23/173 (13%)
Query: 555 NEIKALTKI-RHRNIVKFYGFCSHVRHSFVVYEYINRGSL-ATVLSNNFASEDFDWRKRM 612
EI+ L + +H NI+ +H ++V E + G L +L F SE R+
Sbjct: 69 EEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSE----REAS 124
Query: 613 NVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYE----ARVSDFGTAKLLKPNSSN 668
V+ + + Y+H +VHRD+ +N+L E R+ DFG AK L+ +
Sbjct: 125 FVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGL 181
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
T +VAP E+ E CD++S G+L ++ G P
Sbjct: 182 LMTPCYTANFVAP----------EVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 101/222 (45%), Gaps = 25/222 (11%)
Query: 505 TKDFDAKYCIGKGEHRSVYR-AKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
+ ++D K +GKG V R +G + A K N+ D ++ E + K+
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK--KLSARDFQKLEREARICRKL 85
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSL-ATVLSNNFASEDFDWRKRMNVITGVADAL 622
+H NIV+ + ++V++ + G L +++ F SE + I + +++
Sbjct: 86 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE----ADASHCIQQILESI 141
Query: 623 SYMHHDCFPPIVHRDISSNNVLLDLEYEA---RVSDFGTAKLLKPNSSNWTELVGTFGYV 679
+Y H + IVHR++ N+LL + + +++DFG A + +S W GT GY+
Sbjct: 142 AYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYL 197
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+P E+ ++ D+++ GV+ ++ G P
Sbjct: 198 SP----------EVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 86/215 (40%), Gaps = 27/215 (12%)
Query: 514 IGKGEHRSVYRAKL------PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRN 567
+G G VY ++ PS ++AVK ++Q D+ +FL E ++K H+N
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQ--DELDFLMEALIISKFNHQN 135
Query: 568 IVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFA----SEDFDWRKRMNVITGVADALS 623
IV+ G F++ E + G L + L ++V +A
Sbjct: 136 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 195
Query: 624 YMHHDCFPPIVHRDISSNNVLLDLEYEARVS---DFGTAKLLKPNSSNWTELVGTFGYVA 680
Y+ + F +HRDI++ N LL RV+ DFG A+ + G +
Sbjct: 196 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--------RAGYYRKGG 244
Query: 681 PAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV 715
A + E T K D +SFGVL E+
Sbjct: 245 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 279
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 103/256 (40%), Gaps = 41/256 (16%)
Query: 548 SDQKEFLNEIKALTKIRHR-NIVKFYGFCSHVRHSF-VVYEYINRGSLATVLSNN----- 600
S+ + ++E+K L I H N+V G C+ V+ E+ G+L+T L +
Sbjct: 74 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 133
Query: 601 -FASEDF--DWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFG 657
+ ED D+ ++I M +HRD+++ N+LL + ++ DFG
Sbjct: 134 PYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFG 193
Query: 658 TAKLL--KPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV 715
A+ + P+ + ++AP E + T + DV+SFGVL E+
Sbjct: 194 LARDIXKDPDXVRKGDARLPLKWMAP----------ETIFDRVYTIQSDVWSFGVLLWEI 243
Query: 716 I---KGKHPGDXXXXXXXXXXXINIEFNAMLDH--RLPHPSLDVQEKLISIMEVALLCLD 770
+PG I+ EF L R+ P E + + L C
Sbjct: 244 FSLGASPYPG----------VKIDEEFCRRLKEGTRMRAPDYTTPE----MYQTMLDCWH 289
Query: 771 GCPNSRPTMQTVCQLL 786
G P+ RPT + + L
Sbjct: 290 GEPSQRPTFSELVEHL 305
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 104/243 (42%), Gaps = 45/243 (18%)
Query: 495 KIMYEEIIRRTKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAV-------KKFNSPFPNDQ 546
+I+ E +R+ K +G G +VY+ +P G+ + + ++ SP N
Sbjct: 12 RILKETELRKVK------VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKAN-- 63
Query: 547 MSDQKEFLNEIKALTKIRHRNIVKFYGFC--SHVRHSFVVYEYINRGSLATVLSNN---F 601
KE L+E + + + + G C S V+ +V + + G L + N
Sbjct: 64 ----KEILDEAYVMAGVGSPYVSRLLGICLTSTVQ---LVTQLMPYGCLLDHVRENRGRL 116
Query: 602 ASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKL 661
S+D +N +A +SY+ +VHRD+++ NVL+ +++DFG A+L
Sbjct: 117 GSQDL-----LNWCMQIAKGMSYLED---VRLVHRDLAARNVLVKSPNHVKITDFGLARL 168
Query: 662 LKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKH 720
L + TE G V I E + T + DV+S+GV E++ G
Sbjct: 169 LDIDE---TEYHADGGKVP-----IKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAK 220
Query: 721 PGD 723
P D
Sbjct: 221 PYD 223
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 86/215 (40%), Gaps = 27/215 (12%)
Query: 514 IGKGEHRSVYRAKL------PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRN 567
+G G VY ++ PS ++AVK ++Q D+ +FL E ++K H+N
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQ--DELDFLMEALIISKFNHQN 112
Query: 568 IVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFA----SEDFDWRKRMNVITGVADALS 623
IV+ G F++ E + G L + L ++V +A
Sbjct: 113 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 172
Query: 624 YMHHDCFPPIVHRDISSNNVLLDLEYEARVS---DFGTAKLLKPNSSNWTELVGTFGYVA 680
Y+ + F +HRDI++ N LL RV+ DFG A+ + G +
Sbjct: 173 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--------RAGYYRKGG 221
Query: 681 PAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV 715
A + E T K D +SFGVL E+
Sbjct: 222 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 256
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 122/291 (41%), Gaps = 50/291 (17%)
Query: 502 IRRTKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAV-------KKFNSPFPNDQMSDQKEF 553
I + +F + G +VY+ +P G+K+ + ++ SP N KE
Sbjct: 11 ILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN------KEI 64
Query: 554 LNEIKALTKIRHRNIVKFYGFC--SHVRHSFVVYEYINRGSLATVL---SNNFASEDFDW 608
L+E + + + ++ + G C S V+ ++ + + G L + +N S+
Sbjct: 65 LDEAYVMASVDNPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYL-- 119
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668
+N +A ++Y+ +VHRD+++ NVL+ +++DFG AKLL
Sbjct: 120 ---LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXX 727
+ G A +I LH T + DV+S+GV E++ G P D
Sbjct: 174 YHAEGGKVPIKWMALESI-LHRI-------YTHQSDVWSYGVTVWELMTFGSKPYDGIPA 225
Query: 728 XXXXXXXINIEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSR 776
E +++L+ RLP P + + + +++ ++ D P R
Sbjct: 226 S---------EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFR 267
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 23/173 (13%)
Query: 555 NEIKALTKI-RHRNIVKFYGFCSHVRHSFVVYEYINRGSL-ATVLSNNFASEDFDWRKRM 612
EI+ L + +H NI+ +H ++V E + G L +L F SE R+
Sbjct: 69 EEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSE----REAS 124
Query: 613 NVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYE----ARVSDFGTAKLLKPNSSN 668
V+ + + Y+H +VHRD+ +N+L E R+ DFG AK L+ +
Sbjct: 125 FVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGL 181
Query: 669 WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
T +VAP E+ E CD++S G+L ++ G P
Sbjct: 182 LMTPCYTANFVAP----------EVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 105/280 (37%), Gaps = 33/280 (11%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKL--PSGDKIAVK-KFNSPFPNDQMSDQKEFLNEIKALTK 562
KD +G G V R + PSG ++V K P Q +F+ E+ A+
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 563 IRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADAL 622
+ HRN+++ YG V E GSL L + R V VA+ +
Sbjct: 68 LDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGM 124
Query: 623 SYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWT---ELVGTFGYV 679
Y+ F +HRD+++ N+LL ++ DFG + L N + F +
Sbjct: 125 GYLESKRF---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWC 181
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXXXXXXXXXINIE 738
AP E T + D + FGV E+ G+ P I+ E
Sbjct: 182 AP----------ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW-IGLNGSQILHKIDKE 230
Query: 739 FNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPT 778
RLP P D + + ++M + C P RPT
Sbjct: 231 -----GERLPRPE-DCPQDIYNVM---VQCWAHKPEDRPT 261
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 89/222 (40%), Gaps = 41/222 (18%)
Query: 514 IGKGEHRSVYRAKL------PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRN 567
+G G VY ++ PS ++AVK ++Q D+ +FL E ++K+ H+N
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQ--DELDFLMEALIISKLNHQN 95
Query: 568 IVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFA----SEDFDWRKRMNVITGVADALS 623
IV+ G F++ E + G L + L ++V +A
Sbjct: 96 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 155
Query: 624 YMHHDCFPPIVHRDISSNNVLLDLEYEARVS---DFGTAKLLKPNSSNWTELVGTFGYVA 680
Y+ + F +HRDI++ N LL RV+ DFG A+ + Y A
Sbjct: 156 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDI---------------YRA 197
Query: 681 PAHGNIGLHLAELAYTMK-------ITEKCDVYSFGVLALEV 715
+ G + + + T K D +SFGVL E+
Sbjct: 198 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 89/222 (40%), Gaps = 41/222 (18%)
Query: 514 IGKGEHRSVYRAKL------PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRN 567
+G G VY ++ PS ++AVK ++Q D+ +FL E ++K+ H+N
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQ--DELDFLMEALIISKLNHQN 109
Query: 568 IVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFA----SEDFDWRKRMNVITGVADALS 623
IV+ G F++ E + G L + L ++V +A
Sbjct: 110 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 169
Query: 624 YMHHDCFPPIVHRDISSNNVLLDLEYEARVS---DFGTAKLLKPNSSNWTELVGTFGYVA 680
Y+ + F +HRDI++ N LL RV+ DFG A+ + Y A
Sbjct: 170 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDI---------------YRA 211
Query: 681 PAHGNIGLHLAELAYTMK-------ITEKCDVYSFGVLALEV 715
+ G + + + T K D +SFGVL E+
Sbjct: 212 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 28/223 (12%)
Query: 506 KDFDAKYCI----GKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALT 561
K+ KY I G+GE V+R S K + KF DQ+ +KE I L
Sbjct: 1 KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKE----ISILN 56
Query: 562 KIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADA 621
RHRNI+ + + +++E+I+ L N ++ + + R+ ++ + V +A
Sbjct: 57 IARHRNILHLHESFESMEELVMIFEFIS--GLDIFERINTSAFELNEREIVSYVHQVCEA 114
Query: 622 LSYMH-HDCFPPIVHRDISSNNVLLDLEYEA--RVSDFGTAKLLKPNSSNWTELVGTFGY 678
L ++H H+ I H DI N++ + ++ +FG A+ LKP N+ L Y
Sbjct: 115 LQFLHSHN----IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG-DNFRLLFTAPEY 169
Query: 679 VAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
AP +H ++ T D++S G L ++ G +P
Sbjct: 170 YAPE-----VHQHDVVST-----ATDMWSLGTLVYVLLSGINP 202
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 27/161 (16%)
Query: 514 IGKGEHRSVYRAK-LPSGDKIAVKKFNSPFPNDQMSDQKE-----FLNEIKALTKIRHRN 567
IG+G V++A+ +G K+A+KK M ++KE L EIK L ++H N
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV-------LMENEKEGFPITALREIKILQLLKHEN 78
Query: 568 IVKFYGFC-------SHVRHS-FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVA 619
+V C + + S ++V+++ LA +LSN KR V+ +
Sbjct: 79 VVNLIEICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--VMQMLL 135
Query: 620 DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAK 660
+ L Y+H + I+HRD+ + NVL+ + +++DFG A+
Sbjct: 136 NGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 102/220 (46%), Gaps = 23/220 (10%)
Query: 504 RTKDFDAKYCIGKGEHRSVYR-AKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTK 562
+ DF+ +G G V++ + PSG +A K + + + + + + E++ L +
Sbjct: 4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHE 60
Query: 563 IRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSN-NFASEDFDWRKRMNVITGVADA 621
IV FYG + E+++ GSL VL E + + VI G
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG---- 116
Query: 622 LSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAP 681
L+Y+ I+HRD+ +N+L++ E ++ DFG + L + +N VGT Y++P
Sbjct: 117 LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSP 172
Query: 682 AHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
G H Y++ + D++S G+ +E+ G++P
Sbjct: 173 ERLQ-GTH-----YSV----QSDIWSMGLSLVEMAVGRYP 202
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 104/258 (40%), Gaps = 43/258 (16%)
Query: 548 SDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSF-VVYEYINRGSLATVLS---NNF- 601
S+ + ++E+K L I H N+V G C+ V+ E+ G+L+T L N F
Sbjct: 63 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 122
Query: 602 ----ASEDF--DWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSD 655
A ED D+ ++I M +HRD+++ N+LL + ++ D
Sbjct: 123 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICD 182
Query: 656 FGTAKLL--KPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLAL 713
FG A+ + P+ + ++AP E + T + DV+SFGVL
Sbjct: 183 FGLARDIXKDPDXVRKGDARLPLKWMAP----------ETIFDRVYTIQSDVWSFGVLLW 232
Query: 714 EVI---KGKHPGDXXXXXXXXXXXINIEFNAMLDH--RLPHPSLDVQEKLISIMEVALLC 768
E+ +PG I+ EF L R+ P E + + L C
Sbjct: 233 EIFSLGASPYPG----------VKIDEEFCRRLKEGTRMRAPDYTTPE----MYQTMLDC 278
Query: 769 LDGCPNSRPTMQTVCQLL 786
G P+ RPT + + L
Sbjct: 279 WHGEPSQRPTFSELVEHL 296
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 104/258 (40%), Gaps = 43/258 (16%)
Query: 548 SDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSF-VVYEYINRGSLATVLS---NNF- 601
S+ + ++E+K L I H N+V G C+ V+ E+ G+L+T L N F
Sbjct: 109 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 168
Query: 602 ----ASEDF--DWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSD 655
A ED D+ ++I M +HRD+++ N+LL + ++ D
Sbjct: 169 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICD 228
Query: 656 FGTAKLL--KPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLAL 713
FG A+ + P+ + ++AP E + T + DV+SFGVL
Sbjct: 229 FGLARDIYKDPDYVRKGDARLPLKWMAP----------ETIFDRVYTIQSDVWSFGVLLW 278
Query: 714 EVI---KGKHPGDXXXXXXXXXXXINIEFNAMLDH--RLPHPSLDVQEKLISIMEVALLC 768
E+ +PG I+ EF L R+ P E + + L C
Sbjct: 279 EIFSLGASPYPG----------VKIDEEFCRRLKEGTRMRAPDYTTPE----MYQTMLDC 324
Query: 769 LDGCPNSRPTMQTVCQLL 786
G P+ RPT + + L
Sbjct: 325 WHGEPSQRPTFSELVEHL 342
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 101/220 (45%), Gaps = 23/220 (10%)
Query: 504 RTKDFDAKYCIGKGEHRSVYR-AKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTK 562
+ DF+ +G G V++ + PSG +A K + + + + + + E++ L +
Sbjct: 23 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHE 79
Query: 563 IRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSN-NFASEDFDWRKRMNVITGVADA 621
IV FYG + E+++ GSL VL E + + VI G
Sbjct: 80 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG---- 135
Query: 622 LSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAP 681
L+Y+ I+HRD+ +N+L++ E ++ DFG + L + +N VGT Y++P
Sbjct: 136 LTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSP 191
Query: 682 AHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
L Y++ + D++S G+ +E+ G++P
Sbjct: 192 E------RLQGTHYSV----QSDIWSMGLSLVEMAVGRYP 221
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 102/220 (46%), Gaps = 23/220 (10%)
Query: 504 RTKDFDAKYCIGKGEHRSVYR-AKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTK 562
+ DF+ +G G V++ + PSG +A K + + + + + + E++ L +
Sbjct: 4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHE 60
Query: 563 IRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSN-NFASEDFDWRKRMNVITGVADA 621
IV FYG + E+++ GSL VL E + + VI G
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG---- 116
Query: 622 LSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAP 681
L+Y+ I+HRD+ +N+L++ E ++ DFG + L + +N VGT Y++P
Sbjct: 117 LTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSP 172
Query: 682 AHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
G H Y++ + D++S G+ +E+ G++P
Sbjct: 173 ERLQ-GTH-----YSV----QSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 102/220 (46%), Gaps = 23/220 (10%)
Query: 504 RTKDFDAKYCIGKGEHRSVYR-AKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTK 562
+ DF+ +G G V++ + PSG +A K + + + + + + E++ L +
Sbjct: 4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHE 60
Query: 563 IRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSN-NFASEDFDWRKRMNVITGVADA 621
IV FYG + E+++ GSL VL E + + VI G
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG---- 116
Query: 622 LSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAP 681
L+Y+ I+HRD+ +N+L++ E ++ DFG + L + +N VGT Y++P
Sbjct: 117 LTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSP 172
Query: 682 AHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
G H Y++ + D++S G+ +E+ G++P
Sbjct: 173 ERLQ-GTH-----YSV----QSDIWSMGLSLVEMAVGRYP 202
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 104/258 (40%), Gaps = 43/258 (16%)
Query: 548 SDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSF-VVYEYINRGSLATVLS---NNF- 601
S+ + ++E+K L I H N+V G C+ V+ E+ G+L+T L N F
Sbjct: 72 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 131
Query: 602 ----ASEDF--DWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSD 655
A ED D+ ++I M +HRD+++ N+LL + ++ D
Sbjct: 132 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICD 191
Query: 656 FGTAKLL--KPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLAL 713
FG A+ + P+ + ++AP E + T + DV+SFGVL
Sbjct: 192 FGLARDIYKDPDXVRKGDARLPLKWMAP----------ETIFDRVYTIQSDVWSFGVLLW 241
Query: 714 EVI---KGKHPGDXXXXXXXXXXXINIEFNAMLDH--RLPHPSLDVQEKLISIMEVALLC 768
E+ +PG I+ EF L R+ P E + + L C
Sbjct: 242 EIFSLGASPYPG----------VKIDEEFCRRLKEGTRMRAPDYTTPE----MYQTMLDC 287
Query: 769 LDGCPNSRPTMQTVCQLL 786
G P+ RPT + + L
Sbjct: 288 WHGEPSQRPTFSELVEHL 305
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 104/258 (40%), Gaps = 43/258 (16%)
Query: 548 SDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSF-VVYEYINRGSLATVLS---NNF- 601
S+ + ++E+K L I H N+V G C+ V+ E+ G+L+T L N F
Sbjct: 72 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 131
Query: 602 ----ASEDF--DWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSD 655
A ED D+ ++I M +HRD+++ N+LL + ++ D
Sbjct: 132 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICD 191
Query: 656 FGTAKLL--KPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLAL 713
FG A+ + P+ + ++AP E + T + DV+SFGVL
Sbjct: 192 FGLARDIXKDPDXVRKGDARLPLKWMAP----------ETIFDRVYTIQSDVWSFGVLLW 241
Query: 714 EVI---KGKHPGDXXXXXXXXXXXINIEFNAMLDH--RLPHPSLDVQEKLISIMEVALLC 768
E+ +PG I+ EF L R+ P E + + L C
Sbjct: 242 EIFSLGASPYPG----------VKIDEEFCRRLKEGTRMRAPDYTTPE----MYQTMLDC 287
Query: 769 LDGCPNSRPTMQTVCQLL 786
G P+ RPT + + L
Sbjct: 288 WHGEPSQRPTFSELVEHL 305
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 91/220 (41%), Gaps = 36/220 (16%)
Query: 518 EHRSVYRAKLP----------------SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALT 561
E R+VYR P +G K+A+KK PF ++ + K E++ L
Sbjct: 22 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFA--KRAYRELRLLK 79
Query: 562 KIRHRNIVKFYGFCS--HVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVA 619
+RH N++ + F + Y+ + T L E + ++ +
Sbjct: 80 HMRHENVIGLLDVFTPDETLDDFTDF-YLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQML 138
Query: 620 DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYV 679
L Y+H I+HRD+ N+ ++ + E ++ DFG A + S V T Y
Sbjct: 139 KGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLA---RQADSEMXGXVVTRWYR 192
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGK 719
AP + L+ M+ T+ D++S G + E+I GK
Sbjct: 193 AP---EVILNW------MRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 23/210 (10%)
Query: 514 IGKGEHRSV---YRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVK 570
+G G + SV Y A+L K+AVKK + PF + + + E++ L ++H N++
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQS--LIHARRTYRELRLLKHLKHENVIG 91
Query: 571 FYG-FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDC 629
F Y+ + L+N + ++ + L Y+H
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG 151
Query: 630 FPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLH 689
I+HRD+ +NV ++ + E R+ DFG A + T V T Y AP I L+
Sbjct: 152 ---IIHRDLKPSNVAVNEDSELRILDFGLA---RQADEEMTGYVATRWYRAP---EIMLN 202
Query: 690 LAELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E+++GK
Sbjct: 203 W------MHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 31/220 (14%)
Query: 514 IGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKF- 571
IG G VY+AKL SG+ +A+KK + D++ E++ + K+ H NIV+
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 83
Query: 572 YGFCSHVRHSFVVY-----EYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
Y F S VY +Y+ + A + + + +L+Y+H
Sbjct: 84 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 143
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEA-RVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
I HRDI N+LLD + ++ DFG+AK L N + + + Y AP
Sbjct: 144 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPE--- 196
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGK--HPGD 723
L YT I DV+S G + E++ G+ PGD
Sbjct: 197 --LIFGATDYTSSI----DVWSAGCVLAELLLGQPIFPGD 230
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 27/161 (16%)
Query: 514 IGKGEHRSVYRAK-LPSGDKIAVKKFNSPFPNDQMSDQKE-----FLNEIKALTKIRHRN 567
IG+G V++A+ +G K+A+KK M ++KE L EIK L ++H N
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV-------LMENEKEGFPITALREIKILQLLKHEN 78
Query: 568 IVKFYGFC-------SHVRHS-FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVA 619
+V C + + S ++V+++ LA +LSN KR V+ +
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--VMQMLL 135
Query: 620 DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAK 660
+ L Y+H + I+HRD+ + NVL+ + +++DFG A+
Sbjct: 136 NGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 17/168 (10%)
Query: 556 EIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVI 615
EI L +RH +I+K Y + +V EY ++ +ED R +I
Sbjct: 59 EISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQII 118
Query: 616 TGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGT 675
A+ Y H IVHRD+ N+LLD +++DFG + ++ + T G+
Sbjct: 119 C----AIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS-CGS 170
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGD 723
Y AP N L+ + DV+S G++ ++ G+ P D
Sbjct: 171 PNYAAPEVINGKLYAG---------PEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 104/258 (40%), Gaps = 43/258 (16%)
Query: 548 SDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSF-VVYEYINRGSLATVLS---NNF- 601
S+ + ++E+K L I H N+V G C+ V+ E+ G+L+T L N F
Sbjct: 63 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFV 122
Query: 602 ----ASEDF--DWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSD 655
A ED D+ ++I M +HRD+++ N+LL + ++ D
Sbjct: 123 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICD 182
Query: 656 FGTAKLL--KPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLAL 713
FG A+ + P+ + ++AP E + T + DV+SFGVL
Sbjct: 183 FGLARDIXKDPDXVRKGDARLPLKWMAP----------ETIFDRVYTIQSDVWSFGVLLW 232
Query: 714 EVI---KGKHPGDXXXXXXXXXXXINIEFNAMLDH--RLPHPSLDVQEKLISIMEVALLC 768
E+ +PG I+ EF L R+ P E + + L C
Sbjct: 233 EIFSLGASPYPG----------VKIDEEFCRRLKEGTRMRAPDYTTPE----MYQTMLDC 278
Query: 769 LDGCPNSRPTMQTVCQLL 786
G P+ RPT + + L
Sbjct: 279 WHGEPSQRPTFSELVEHL 296
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 102/220 (46%), Gaps = 23/220 (10%)
Query: 504 RTKDFDAKYCIGKGEHRSVYR-AKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTK 562
+ DF+ +G G V++ + PSG +A K + + + + + + E++ L +
Sbjct: 66 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHE 122
Query: 563 IRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSN-NFASEDFDWRKRMNVITGVADA 621
IV FYG + E+++ GSL VL E + + VI G
Sbjct: 123 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG---- 178
Query: 622 LSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAP 681
L+Y+ I+HRD+ +N+L++ E ++ DFG + L + +N VGT Y++P
Sbjct: 179 LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSP 234
Query: 682 AHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
G H Y++ + D++S G+ +E+ G++P
Sbjct: 235 ERLQ-GTH-----YSV----QSDIWSMGLSLVEMAVGRYP 264
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 102/220 (46%), Gaps = 23/220 (10%)
Query: 504 RTKDFDAKYCIGKGEHRSVYR-AKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTK 562
+ DF+ +G G V++ + PSG +A K + + + + + + E++ L +
Sbjct: 4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHE 60
Query: 563 IRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSN-NFASEDFDWRKRMNVITGVADA 621
IV FYG + E+++ GSL VL E + + VI G
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG---- 116
Query: 622 LSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAP 681
L+Y+ I+HRD+ +N+L++ E ++ DFG + L + +N VGT Y++P
Sbjct: 117 LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSP 172
Query: 682 AHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
G H Y++ + D++S G+ +E+ G++P
Sbjct: 173 ERLQ-GTH-----YSV----QSDIWSMGLSLVEMAVGRYP 202
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 31/220 (14%)
Query: 514 IGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKF- 571
IG G VY+AKL SG+ +A+KK + D++ E++ + K+ H NIV+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 79
Query: 572 YGFCSHVRHSFVVY-----EYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
Y F S VY +Y+ + A + + + +L+Y+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEA-RVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
I HRDI N+LLD + ++ DFG+AK L N + + + Y AP
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPE--- 192
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGK--HPGD 723
L YT I DV+S G + E++ G+ PGD
Sbjct: 193 --LIFGATDYTSSI----DVWSAGCVLAELLLGQPIFPGD 226
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 82/190 (43%), Gaps = 23/190 (12%)
Query: 554 LNEIKALTKIR-HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRM 612
L EIK LT+ H N++++Y + R ++ E N V S N + E+ +K
Sbjct: 56 LMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEY 115
Query: 613 NVITGVADALSYMHHDCFPPIVHRDISSNNVLL--------DLEYEAR-----VSDFGTA 659
N I+ + S + H I+HRD+ N+L+ D + A +SDFG
Sbjct: 116 NPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 175
Query: 660 KLLKPNS----SNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV 715
K L N GT G+ AP + L ++T D++S G + +
Sbjct: 176 KKLDSGQXXFRXNLNNPSGTSGWRAP---ELLEESNNLQTKRRLTRSIDIFSMGCVFYYI 232
Query: 716 I-KGKHP-GD 723
+ KGKHP GD
Sbjct: 233 LSKGKHPFGD 242
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 97/230 (42%), Gaps = 38/230 (16%)
Query: 502 IRRTKDFDAKYCIGKGEH----RSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEI 557
I+ T ++ K IG G + R +++A + + AVK + +++ EI
Sbjct: 18 IQFTDGYEVKEDIGVGSYSVCKRCIHKA---TNMEFAVKIIDK--------SKRDPTEEI 66
Query: 558 KALTKI-RHRNIVKFYGFCSHVRHSFVVYEYINRGSL-ATVLSNNFASEDFDWRKRMNVI 615
+ L + +H NI+ ++ +VV E + G L +L F SE R+ V+
Sbjct: 67 EILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSE----REASAVL 122
Query: 616 TGVADALSYMHHDCFPPIVHRDISSNNVLLDLE----YEARVSDFGTAKLLKPNSSNWTE 671
+ + Y+H +VHRD+ +N+L E R+ DFG AK L+ +
Sbjct: 123 FTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMT 179
Query: 672 LVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
T +VAP E+ CD++S GVL ++ G P
Sbjct: 180 PCYTANFVAP----------EVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 102/220 (46%), Gaps = 23/220 (10%)
Query: 504 RTKDFDAKYCIGKGEHRSVYR-AKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTK 562
+ DF+ +G G V++ + PSG +A K + + + + + + E++ L +
Sbjct: 4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHE 60
Query: 563 IRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSN-NFASEDFDWRKRMNVITGVADA 621
IV FYG + E+++ GSL VL E + + VI G
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG---- 116
Query: 622 LSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAP 681
L+Y+ I+HRD+ +N+L++ E ++ DFG + L + +N VGT Y++P
Sbjct: 117 LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSP 172
Query: 682 AHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
G H Y++ + D++S G+ +E+ G++P
Sbjct: 173 ERLQ-GTH-----YSV----QSDIWSMGLSLVEMAVGRYP 202
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 27/161 (16%)
Query: 514 IGKGEHRSVYRAK-LPSGDKIAVKKFNSPFPNDQMSDQKE-----FLNEIKALTKIRHRN 567
IG+G V++A+ +G K+A+KK M ++KE L EIK L ++H N
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV-------LMENEKEGFPITALREIKILQLLKHEN 78
Query: 568 IVKFYGFCSHVRHSF--------VVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVA 619
+V C + +V+++ LA +LSN KR V+ +
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--VMQMLL 135
Query: 620 DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAK 660
+ L Y+H + I+HRD+ + NVL+ + +++DFG A+
Sbjct: 136 NGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 102/236 (43%), Gaps = 49/236 (20%)
Query: 506 KDFDAKYCIGKGEHRSVYRA--KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
++F IG+G + VY+A KL +G+ +A+KK + + + EI L ++
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTA--IREISLLKEL 66
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV--ITGVA-- 619
H NIVK ++V+E++++ D +K M+ +TG+
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFLHQ----------------DLKKFMDASALTGIPLP 110
Query: 620 ----------DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
L++ H ++HRD+ N+L++ E +++DFG A+ +
Sbjct: 111 LIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 167
Query: 670 TELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI--KGKHPGD 723
T V T Y AP + L Y+ + D++S G + E++ + PGD
Sbjct: 168 THEVVTLWYRAPE-----ILLGXKYYSTAV----DIWSLGCIFAEMVTRRALFPGD 214
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 88/222 (39%), Gaps = 41/222 (18%)
Query: 514 IGKGEHRSVYRAKL------PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRN 567
+G G VY ++ PS ++AVK ++Q D+ +FL E ++K H+N
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQ--DELDFLMEALIISKFNHQN 86
Query: 568 IVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFA----SEDFDWRKRMNVITGVADALS 623
IV+ G F++ E + G L + L ++V +A
Sbjct: 87 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 146
Query: 624 YMHHDCFPPIVHRDISSNNVLLDLEYEARVS---DFGTAKLLKPNSSNWTELVGTFGYVA 680
Y+ + F +HRDI++ N LL RV+ DFG A+ + Y A
Sbjct: 147 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDI---------------YRA 188
Query: 681 PAHGNIGLHLAELAYTMK-------ITEKCDVYSFGVLALEV 715
+ G + + + T K D +SFGVL E+
Sbjct: 189 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 230
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 102/220 (46%), Gaps = 23/220 (10%)
Query: 504 RTKDFDAKYCIGKGEHRSVYR-AKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTK 562
+ DF+ +G G V++ + PSG +A K + + + + + + E++ L +
Sbjct: 31 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHE 87
Query: 563 IRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSN-NFASEDFDWRKRMNVITGVADA 621
IV FYG + E+++ GSL VL E + + VI G
Sbjct: 88 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG---- 143
Query: 622 LSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAP 681
L+Y+ I+HRD+ +N+L++ E ++ DFG + L + +N VGT Y++P
Sbjct: 144 LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSP 199
Query: 682 AHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
G H Y++ + D++S G+ +E+ G++P
Sbjct: 200 ERLQ-GTH-----YSV----QSDIWSMGLSLVEMAVGRYP 229
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 31/220 (14%)
Query: 514 IGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKF- 571
IG G VY+AKL SG+ +A+KK + D++ E++ + K+ H NIV+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 79
Query: 572 YGFCSHVRHSFVVY-----EYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
Y F S VY +Y+ + A + + + +L+Y+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEA-RVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
I HRDI N+LLD + ++ DFG+AK L N + + + Y AP
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPE--- 192
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGK--HPGD 723
L YT I DV+S G + E++ G+ PGD
Sbjct: 193 --LIFGATDYTSSI----DVWSAGCVLAELLLGQPIFPGD 226
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 31/220 (14%)
Query: 514 IGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKF- 571
IG G VY+AKL SG+ +A+KK + D++ E++ + K+ H NIV+
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 80
Query: 572 YGFCSHVRHSFVVY-----EYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
Y F S VY +Y+ + A + + + +L+Y+H
Sbjct: 81 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 140
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEA-RVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
I HRDI N+LLD + ++ DFG+AK L N + + + Y AP
Sbjct: 141 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPE--- 193
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGK--HPGD 723
L YT I DV+S G + E++ G+ PGD
Sbjct: 194 --LIFGATDYTSSI----DVWSAGCVLAELLLGQPIFPGD 227
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 26/210 (12%)
Query: 513 CIGKGE----HRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNI 568
CIG+G+ H+ +Y + +A+K + + S +++FL E + + H +I
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSD---SVREKFLQEALTMRQFDHPHI 73
Query: 569 VKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHD 628
VK G + +++ E G L + L S D + ++ AL+Y+
Sbjct: 74 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFS--LDLASLILYAYQLSTALAYLESK 130
Query: 629 CFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTF--GYVAPAHGNI 686
F VHRDI++ NVL+ ++ DFG ++ ++ +S+ + G ++AP N
Sbjct: 131 RF---VHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINF 186
Query: 687 GLHLAELAYTMKITEKCDVYSFGVLALEVI 716
+ T DV+ FGV E++
Sbjct: 187 ----------RRFTSASDVWMFGVCMWEIL 206
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 27/161 (16%)
Query: 514 IGKGEHRSVYRAK-LPSGDKIAVKKFNSPFPNDQMSDQKE-----FLNEIKALTKIRHRN 567
IG+G V++A+ +G K+A+KK M ++KE L EIK L ++H N
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKV-------LMENEKEGFPITALREIKILQLLKHEN 77
Query: 568 IVKFYGFCSHVRHSF--------VVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVA 619
+V C + +V+++ LA +LSN KR V+ +
Sbjct: 78 VVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--VMQMLL 134
Query: 620 DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAK 660
+ L Y+H + I+HRD+ + NVL+ + +++DFG A+
Sbjct: 135 NGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 29/207 (14%)
Query: 519 HRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHV 578
HR RA +G+ A K +P SD++ EI+ ++ +RH +V +
Sbjct: 174 HRVTERA---TGNNFAAKFVMTP----HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDD 226
Query: 579 RHSFVVYEYINRGSLATVLSN--NFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHR 636
++YE+++ G L +++ N SED + + + V L +MH + + VH
Sbjct: 227 NEMVMIYEFMSGGELFEKVADEHNKMSED----EAVEYMRQVCKGLCHMHENNY---VHL 279
Query: 637 DISSNNVLLDLEY--EARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELA 694
D+ N++ + E ++ DFG L P S GT + AP E+A
Sbjct: 280 DLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV-KVTTGTAEFAAP----------EVA 328
Query: 695 YTMKITEKCDVYSFGVLALEVIKGKHP 721
+ D++S GVL+ ++ G P
Sbjct: 329 EGKPVGYYTDMWSVGVLSYILLSGLSP 355
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 31/220 (14%)
Query: 514 IGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKF- 571
IG G VY+AKL SG+ +A+KK + D++ E++ + K+ H NIV+
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 91
Query: 572 YGFCSHVRHSFVVY-----EYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
Y F S VY +Y+ + A + + + +L+Y+H
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEA-RVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
I HRDI N+LLD + ++ DFG+AK L N + + + Y AP
Sbjct: 152 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPE--- 204
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGK--HPGD 723
L YT I DV+S G + E++ G+ PGD
Sbjct: 205 --LIFGATDYTSSI----DVWSAGCVLAELLLGQPIFPGD 238
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 88/222 (39%), Gaps = 41/222 (18%)
Query: 514 IGKGEHRSVYRAKL------PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRN 567
+G G VY ++ PS ++AVK ++Q D+ +FL E ++K H+N
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQ--DELDFLMEALIISKFNHQN 111
Query: 568 IVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFA----SEDFDWRKRMNVITGVADALS 623
IV+ G F++ E + G L + L ++V +A
Sbjct: 112 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 171
Query: 624 YMHHDCFPPIVHRDISSNNVLLDLEYEARVS---DFGTAKLLKPNSSNWTELVGTFGYVA 680
Y+ + F +HRDI++ N LL RV+ DFG A+ + Y A
Sbjct: 172 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDI---------------YRA 213
Query: 681 PAHGNIGLHLAELAYTMK-------ITEKCDVYSFGVLALEV 715
+ G + + + T K D +SFGVL E+
Sbjct: 214 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 255
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 83/183 (45%), Gaps = 12/183 (6%)
Query: 503 RRTKDFDAKYCIGKGEHRSVYR-AKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALT 561
R T+++ +GKG V R K+ +G + A N+ D ++ E +
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTK--KLSARDHQKLEREARICR 65
Query: 562 KIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADA 621
++H NIV+ + S H +++++ + G L + A E + + I + +A
Sbjct: 66 LLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEA 122
Query: 622 LSYMHHDCFPPIVHRDISSNNVLLDLEYEA---RVSDFGTAKLLKPNSSNWTELVGTFGY 678
+ + H +VHR++ N+LL + + +++DFG A ++ W GT GY
Sbjct: 123 VLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGY 179
Query: 679 VAP 681
++P
Sbjct: 180 LSP 182
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 49/233 (21%)
Query: 514 IGKGEHRSVYRAKLPS------GDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRN 567
IG+G V++A+ P +AVK D +D F E + + + N
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQAD---FQREAALMAEFDNPN 111
Query: 568 IVKFYGFCSHVRHSFVVYEYINRGSLATVLSN-------NFASEDFDWRKRMN------- 613
IVK G C+ + +++EY+ G L L + + + D R R++
Sbjct: 112 IVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL 171
Query: 614 -------VITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNS 666
+ VA ++Y+ F VHRD+++ N L+ +++DFG ++ + S
Sbjct: 172 SCAEQLCIARQVAAGMAYLSERKF---VHRDLATRNCLVGENMVVKIADFGLSRNIY--S 226
Query: 667 SNWTELVGTFGYVAPAHGNIGLHL----AELAYTMKITEKCDVYSFGVLALEV 715
+++ + A GN + + E + + T + DV+++GV+ E+
Sbjct: 227 ADYYK----------ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 269
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 88/222 (39%), Gaps = 41/222 (18%)
Query: 514 IGKGEHRSVYRAKL------PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRN 567
+G G VY ++ PS ++AVK ++Q D+ +FL E ++K H+N
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQ--DELDFLMEALIISKFNHQN 94
Query: 568 IVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFA----SEDFDWRKRMNVITGVADALS 623
IV+ G F++ E + G L + L ++V +A
Sbjct: 95 IVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 154
Query: 624 YMHHDCFPPIVHRDISSNNVLLDLEYEARVS---DFGTAKLLKPNSSNWTELVGTFGYVA 680
Y+ + F +HRDI++ N LL RV+ DFG A+ + Y A
Sbjct: 155 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDI---------------YRA 196
Query: 681 PAHGNIGLHLAELAYTMK-------ITEKCDVYSFGVLALEV 715
+ G + + + T K D +SFGVL E+
Sbjct: 197 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 104/258 (40%), Gaps = 43/258 (16%)
Query: 548 SDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSF-VVYEYINRGSLATVLS---NNF- 601
S+ + ++E+K L I H N+V G C+ V+ E+ G+L+T L N F
Sbjct: 74 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 133
Query: 602 ----ASEDF--DWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSD 655
A ED D+ ++I M +HRD+++ N+LL + ++ D
Sbjct: 134 PYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICD 193
Query: 656 FGTAKLL--KPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLAL 713
FG A+ + P+ + ++AP E + T + DV+SFGVL
Sbjct: 194 FGLARDIYKDPDYVRKGDARLPLKWMAP----------ETIFDRVYTIQSDVWSFGVLLW 243
Query: 714 EVI---KGKHPGDXXXXXXXXXXXINIEFNAMLDH--RLPHPSLDVQEKLISIMEVALLC 768
E+ +PG I+ EF L R+ P E + + L C
Sbjct: 244 EIFSLGASPYPG----------VKIDEEFCRRLKEGTRMRAPDYTTPE----MYQTMLDC 289
Query: 769 LDGCPNSRPTMQTVCQLL 786
G P+ RPT + + L
Sbjct: 290 WHGEPSQRPTFSELVEHL 307
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 31/220 (14%)
Query: 514 IGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKF- 571
IG G VY+AKL SG+ +A+KK + D++ E++ + K+ H NIV+
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 113
Query: 572 YGFCSHVRHSFVVY-----EYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
Y F S VY +Y+ + A + + + +L+Y+H
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEA-RVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
I HRDI N+LLD + ++ DFG+AK L N + + + Y AP
Sbjct: 174 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPE--- 226
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGK--HPGD 723
L YT I DV+S G + E++ G+ PGD
Sbjct: 227 --LIFGATDYTSSI----DVWSAGCVLAELLLGQPIFPGD 260
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 101/222 (45%), Gaps = 25/222 (11%)
Query: 505 TKDFDAKYCIGKGEHRSVYR-AKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
+ ++D K +GKG V R +G + A K N+ D ++ E + K+
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK--KLSARDFQKLEREARICRKL 62
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSL-ATVLSNNFASEDFDWRKRMNVITGVADAL 622
+H NIV+ + ++V++ + G L +++ F SE + I + +++
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE----ADASHCIQQILESI 118
Query: 623 SYMHHDCFPPIVHRDISSNNVLLDLEYE---ARVSDFGTAKLLKPNSSNWTELVGTFGYV 679
+Y H + IVHR++ N+LL + + +++DFG A + +S W GT GY+
Sbjct: 119 AYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYL 174
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+P E+ ++ D+++ GV+ ++ G P
Sbjct: 175 SP----------EVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 23/210 (10%)
Query: 514 IGKGEHRSV---YRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVK 570
+G G + SV Y A+L K+AVKK + PF + + + E++ L ++H N++
Sbjct: 28 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQS--LIHARRTYRELRLLKHLKHENVIG 83
Query: 571 FYG-FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDC 629
F Y+ + L+N + ++ + L Y+H
Sbjct: 84 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG 143
Query: 630 FPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLH 689
I+HRD+ +NV ++ + E R+ DFG A + T V T Y AP I L+
Sbjct: 144 ---IIHRDLKPSNVAVNEDCELRILDFGLA---RQADEEMTGYVATRWYRAP---EIMLN 194
Query: 690 LAELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E+++GK
Sbjct: 195 W------MHYNQTVDIWSVGCIMAELLQGK 218
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 31/220 (14%)
Query: 514 IGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKF- 571
IG G VY+AKL SG+ +A+KK + D++ E++ + K+ H NIV+
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 87
Query: 572 YGFCSHVRHSFVVY-----EYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
Y F S VY +Y+ + A + + + +L+Y+H
Sbjct: 88 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 147
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEA-RVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
I HRDI N+LLD + ++ DFG+AK L N + + + Y AP
Sbjct: 148 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPE--- 200
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGK--HPGD 723
L YT I DV+S G + E++ G+ PGD
Sbjct: 201 --LIFGATDYTSSI----DVWSAGCVLAELLLGQPIFPGD 234
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 110/260 (42%), Gaps = 41/260 (15%)
Query: 478 SKNDTRGIFHSVLDFDGKIMYEEIIRR--------TKDFDAKY-------CIGKGE---- 518
+ N+ +G+ + Y EII T+D++ + CIG+G+
Sbjct: 347 ANNEKQGVRSHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDV 406
Query: 519 HRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHV 578
H+ +Y + +A+K + + S +++FL E + + H +IVK G +
Sbjct: 407 HQGIYMSPENPAMAVAIKTCKNCTSD---SVREKFLQEALTMRQFDHPHIVKLIGVITE- 462
Query: 579 RHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDI 638
+++ E G L + L S D + ++ AL+Y+ F VHRDI
Sbjct: 463 NPVWIIMELCTLGELRSFLQVRKFS--LDLASLILYAYQLSTALAYLESKRF---VHRDI 517
Query: 639 SSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTF--GYVAPAHGNIGLHLAELAYT 696
++ NVL+ ++ DFG ++ ++ +S+ + G ++AP N
Sbjct: 518 AARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINF---------- 566
Query: 697 MKITEKCDVYSFGVLALEVI 716
+ T DV+ FGV E++
Sbjct: 567 RRFTSASDVWMFGVCMWEIL 586
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 31/220 (14%)
Query: 514 IGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKF- 571
IG G VY+AKL SG+ +A+KK + D++ E++ + K+ H NIV+
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 98
Query: 572 YGFCSHVRHSFVVY-----EYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
Y F S VY +Y+ + A + + + +L+Y+H
Sbjct: 99 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 158
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEA-RVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
I HRDI N+LLD + ++ DFG+AK L N + + + Y AP
Sbjct: 159 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPE--- 211
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGK--HPGD 723
L YT I DV+S G + E++ G+ PGD
Sbjct: 212 --LIFGATDYTSSI----DVWSAGCVLAELLLGQPIFPGD 245
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 88/222 (39%), Gaps = 41/222 (18%)
Query: 514 IGKGEHRSVYRAKL------PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRN 567
+G G VY ++ PS ++AVK ++Q D+ +FL E ++K H+N
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQ--DELDFLMEALIISKFNHQN 94
Query: 568 IVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFA----SEDFDWRKRMNVITGVADALS 623
IV+ G F++ E + G L + L ++V +A
Sbjct: 95 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 154
Query: 624 YMHHDCFPPIVHRDISSNNVLLDLEYEARVS---DFGTAKLLKPNSSNWTELVGTFGYVA 680
Y+ + F +HRDI++ N LL RV+ DFG A+ + Y A
Sbjct: 155 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDI---------------YRA 196
Query: 681 PAHGNIGLHLAELAYTMK-------ITEKCDVYSFGVLALEV 715
+ G + + + T K D +SFGVL E+
Sbjct: 197 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N S+ +I + L Y+H
Sbjct: 88 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG L + T V T Y AP I L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDSELKILDFG---LCRHTDDEMTGYVATRWYRAP---EIMLNW 197
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 198 ------MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 88/222 (39%), Gaps = 41/222 (18%)
Query: 514 IGKGEHRSVYRAKL------PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRN 567
+G G VY ++ PS ++AVK ++Q D+ +FL E ++K H+N
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQ--DELDFLMEALIISKFNHQN 95
Query: 568 IVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFA----SEDFDWRKRMNVITGVADALS 623
IV+ G F++ E + G L + L ++V +A
Sbjct: 96 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 155
Query: 624 YMHHDCFPPIVHRDISSNNVLLDLEYEARVS---DFGTAKLLKPNSSNWTELVGTFGYVA 680
Y+ + F +HRDI++ N LL RV+ DFG A+ + Y A
Sbjct: 156 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDI---------------YRA 197
Query: 681 PAHGNIGLHLAELAYTMK-------ITEKCDVYSFGVLALEV 715
+ G + + + T K D +SFGVL E+
Sbjct: 198 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 88/222 (39%), Gaps = 41/222 (18%)
Query: 514 IGKGEHRSVYRAKL------PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRN 567
+G G VY ++ PS ++AVK ++Q D+ +FL E ++K H+N
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQ--DELDFLMEALIISKFNHQN 109
Query: 568 IVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFA----SEDFDWRKRMNVITGVADALS 623
IV+ G F++ E + G L + L ++V +A
Sbjct: 110 IVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 169
Query: 624 YMHHDCFPPIVHRDISSNNVLLDLEYEARVS---DFGTAKLLKPNSSNWTELVGTFGYVA 680
Y+ + F +HRDI++ N LL RV+ DFG A+ + Y A
Sbjct: 170 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDI---------------YRA 211
Query: 681 PAHGNIGLHLAELAYTMK-------ITEKCDVYSFGVLALEV 715
+ G + + + T K D +SFGVL E+
Sbjct: 212 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 31/220 (14%)
Query: 514 IGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKF- 571
IG G VY+AKL SG+ +A+KK + D++ E++ + K+ H NIV+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 79
Query: 572 YGFCSHVRHSFVVY-----EYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
Y F S VY +Y+ + A + + + +L+Y+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEA-RVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
I HRDI N+LLD + ++ DFG+AK L N + + + Y AP
Sbjct: 140 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPE--- 192
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGK--HPGD 723
L YT I DV+S G + E++ G+ PGD
Sbjct: 193 --LIFGATDYTSSI----DVWSAGCVLAELLLGQPIFPGD 226
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 26/210 (12%)
Query: 513 CIGKGE----HRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNI 568
CIG+G+ H+ +Y + +A+K + + S +++FL E + + H +I
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSD---SVREKFLQEALTMRQFDHPHI 73
Query: 569 VKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHD 628
VK G + +++ E G L + L S D + ++ AL+Y+
Sbjct: 74 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLESK 130
Query: 629 CFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTF--GYVAPAHGNI 686
F VHRDI++ NVL+ ++ DFG ++ ++ +S+ + G ++AP N
Sbjct: 131 RF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINF 186
Query: 687 GLHLAELAYTMKITEKCDVYSFGVLALEVI 716
+ T DV+ FGV E++
Sbjct: 187 ----------RRFTSASDVWMFGVCMWEIL 206
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 104/258 (40%), Gaps = 43/258 (16%)
Query: 548 SDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSF-VVYEYINRGSLATVLS---NNF- 601
S+ + ++E+K L I H N+V G C+ V+ E+ G+L+T L N F
Sbjct: 72 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 131
Query: 602 ----ASEDF--DWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSD 655
A ED D+ ++I M +HRD+++ N+LL + ++ D
Sbjct: 132 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICD 191
Query: 656 FGTAKLL--KPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLAL 713
FG A+ + P+ + ++AP E + T + DV+SFGVL
Sbjct: 192 FGLARDIYKDPDYVRKGDARLPLKWMAP----------ETIFDRVYTIQSDVWSFGVLLW 241
Query: 714 EVI---KGKHPGDXXXXXXXXXXXINIEFNAMLDH--RLPHPSLDVQEKLISIMEVALLC 768
E+ +PG I+ EF L R+ P E + + L C
Sbjct: 242 EIFSLGASPYPG----------VKIDEEFCRRLKEGTRMRAPDYTTPE----MYQTMLDC 287
Query: 769 LDGCPNSRPTMQTVCQLL 786
G P+ RPT + + L
Sbjct: 288 WHGEPSQRPTFSELVEHL 305
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 101/222 (45%), Gaps = 25/222 (11%)
Query: 505 TKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
+ ++D K +GKG V R +G + A K N+ D ++ E + K+
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK--KLSARDFQKLEREARICRKL 62
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSL-ATVLSNNFASEDFDWRKRMNVITGVADAL 622
+H NIV+ + ++V++ + G L +++ F SE + I + +++
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE----ADASHCIQQILESI 118
Query: 623 SYMHHDCFPPIVHRDISSNNVLLDLEYE---ARVSDFGTAKLLKPNSSNWTELVGTFGYV 679
+Y H + IVHR++ N+LL + + +++DFG A + +S W GT GY+
Sbjct: 119 AYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYL 174
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+P E+ ++ D+++ GV+ ++ G P
Sbjct: 175 SP----------EVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 102/236 (43%), Gaps = 49/236 (20%)
Query: 506 KDFDAKYCIGKGEHRSVYRA--KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
++F IG+G + VY+A KL +G+ +A+KK + + + EI L ++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTA--IREISLLKEL 59
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV--ITGVA-- 619
H NIVK ++V+E++++ D +K M+ +TG+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQ----------------DLKKFMDASALTGIPLP 103
Query: 620 ----------DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
L++ H ++HRD+ N+L++ E +++DFG A+ +
Sbjct: 104 LIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 670 TELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI--KGKHPGD 723
T V T Y AP + L Y+ + D++S G + E++ + PGD
Sbjct: 161 THEVVTLWYRAPE-----ILLGXKYYSTAV----DIWSLGCIFAEMVTRRALFPGD 207
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 104/258 (40%), Gaps = 43/258 (16%)
Query: 548 SDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSF-VVYEYINRGSLATVLS---NNF- 601
S+ + ++E+K L I H N+V G C+ V+ E+ G+L+T L N F
Sbjct: 63 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFV 122
Query: 602 ----ASEDF--DWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSD 655
A ED D+ ++I M +HRD+++ N+LL + ++ D
Sbjct: 123 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICD 182
Query: 656 FGTAKLL--KPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLAL 713
FG A+ + P+ + ++AP E + T + DV+SFGVL
Sbjct: 183 FGLARDIYKDPDYVRKGDARLPLKWMAP----------ETIFDRVYTIQSDVWSFGVLLW 232
Query: 714 EVI---KGKHPGDXXXXXXXXXXXINIEFNAMLDH--RLPHPSLDVQEKLISIMEVALLC 768
E+ +PG I+ EF L R+ P E + + L C
Sbjct: 233 EIFSLGASPYPG----------VKIDEEFCRRLKEGTRMRAPDYTTPE----MYQTMLDC 278
Query: 769 LDGCPNSRPTMQTVCQLL 786
G P+ RPT + + L
Sbjct: 279 WHGEPSQRPTFSELVEHL 296
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 73/174 (41%), Gaps = 24/174 (13%)
Query: 578 VRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRD 637
V + V EY+N G L + F + + ++ L ++H I++RD
Sbjct: 92 VDRLYFVMEYVNGGDLMYHIQQ---VGKFKEPQAVFYAAEISIGLFFLHKRG---IIYRD 145
Query: 638 ISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTM 697
+ +NV+LD E +++DFG K + E GT Y+AP E+
Sbjct: 146 LKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAP----------EIIAYQ 195
Query: 698 KITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAMLDHRLPHPS 751
+ D +++GVL E++ G+ P D F ++++H + +P
Sbjct: 196 PYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDEL--------FQSIMEHNVSYPK 241
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 104/258 (40%), Gaps = 43/258 (16%)
Query: 548 SDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSF-VVYEYINRGSLATVLS---NNF- 601
S+ + ++E+K L I H N+V G C+ V+ E+ G+L+T L N F
Sbjct: 63 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFV 122
Query: 602 ----ASEDF--DWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSD 655
A ED D+ ++I M +HRD+++ N+LL + ++ D
Sbjct: 123 PYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICD 182
Query: 656 FGTAKLL--KPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLAL 713
FG A+ + P+ + ++AP E + T + DV+SFGVL
Sbjct: 183 FGLARDIYKDPDYVRKGDARLPLKWMAP----------ETIFDRVYTIQSDVWSFGVLLW 232
Query: 714 EVI---KGKHPGDXXXXXXXXXXXINIEFNAMLDH--RLPHPSLDVQEKLISIMEVALLC 768
E+ +PG I+ EF L R+ P E + + L C
Sbjct: 233 EIFSLGASPYPG----------VKIDEEFCRRLKEGTRMRAPDYTTPE----MYQTMLDC 278
Query: 769 LDGCPNSRPTMQTVCQLL 786
G P+ RPT + + L
Sbjct: 279 WHGEPSQRPTFSELVEHL 296
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 91/222 (40%), Gaps = 30/222 (13%)
Query: 507 DFDAKYCIGKGEHRSV--YRAKLPSGDKIAVKKFNSP--FPNDQMSDQKEFLNEIKALTK 562
DFD +GKG V R K +G A+K D+++ + E + L
Sbjct: 6 DFDYLKLLGKGTFGKVILVREK-ATGRYYAMKILRKEVIIAKDEVAHT---VTESRVLQN 61
Query: 563 IRHRNIVKF-YGFCSHVRHSFVVYEYINRGSLATVLSNN--FASEDFDWRKRMNVITGVA 619
RH + Y F +H R FV+ EY N G L LS F E R R +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERVFTEE----RARF-YGAEIV 115
Query: 620 DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYV 679
AL Y+H +V+RDI N++LD + +++DFG K + + GT Y+
Sbjct: 116 SALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYL 172
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
AP E+ D + GV+ E++ G+ P
Sbjct: 173 AP----------EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 23/192 (11%)
Query: 529 SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV--VYE 586
+G+ +AVK S + EI+ L + H +IVK+ G C V V E
Sbjct: 36 TGEMVAVKALKEGCGPQLRSG---WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVME 92
Query: 587 YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLD 646
Y+ GSL L + + + + + ++Y+H + +HR +++ NVLLD
Sbjct: 93 YVPLGSLRDYLPRHCVG----LAQLLLFAQQICEGMAYLHAQHY---IHRALAARNVLLD 145
Query: 647 LEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN--IGLHLAELAYTMKITEKCD 704
+ ++ DFG AK + P + Y G+ + + E K D
Sbjct: 146 NDRLVKIGDFGLAKAV-PEGHEY--------YRVREDGDSPVFWYAPECLKECKFYYASD 196
Query: 705 VYSFGVLALEVI 716
V+SFGV E++
Sbjct: 197 VWSFGVTLYELL 208
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 91/222 (40%), Gaps = 30/222 (13%)
Query: 507 DFDAKYCIGKGEHRSV--YRAKLPSGDKIAVKKFNSP--FPNDQMSDQKEFLNEIKALTK 562
DFD +GKG V R K +G A+K D+++ + E + L
Sbjct: 11 DFDYLKLLGKGTFGKVILVREK-ATGRYYAMKILRKEVIIAKDEVAHT---VTESRVLQN 66
Query: 563 IRHRNIVKF-YGFCSHVRHSFVVYEYINRGSLATVLSNN--FASEDFDWRKRMNVITGVA 619
RH + Y F +H R FV+ EY N G L LS F E R R +
Sbjct: 67 TRHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERVFTEE----RARF-YGAEIV 120
Query: 620 DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYV 679
AL Y+H +V+RDI N++LD + +++DFG K + + GT Y+
Sbjct: 121 SALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYL 177
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
AP E+ D + GV+ E++ G+ P
Sbjct: 178 AP----------EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 102/236 (43%), Gaps = 49/236 (20%)
Query: 506 KDFDAKYCIGKGEHRSVYRA--KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
++F IG+G + VY+A KL +G+ +A+KK + + + EI L ++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTA--IREISLLKEL 59
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV--ITGVA-- 619
H NIVK ++V+E++++ D +K M+ +TG+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQ----------------DLKKFMDASALTGIPLP 103
Query: 620 ----------DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
LS+ H ++HRD+ N+L++ E +++DFG A+ +
Sbjct: 104 LIKSYLFQLLQGLSFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 670 TELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI--KGKHPGD 723
T V T Y AP + L Y+ + D++S G + E++ + PGD
Sbjct: 161 THEVVTLWYRAPE-----ILLGCKYYSTAV----DIWSLGCIFAEMVTRRALFPGD 207
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 96/227 (42%), Gaps = 30/227 (13%)
Query: 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
T ++ IG G + +VY+A+ P SG +A+K PN ++ ++ + +
Sbjct: 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVR--VPNGGGGGGGLPISTVREVALL 65
Query: 564 R------HRNIVKFYGFCSHVRHS-----FVVYEYINRGSLATVLSNNFASEDFDWRKRM 612
R H N+V+ C+ R +V+E++++ L T L +
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL-DKAPPPGLPAETIK 123
Query: 613 NVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTEL 672
+++ L ++H +C IVHRD+ N+L+ +++DFG A++ T +
Sbjct: 124 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS-YQMALTPV 179
Query: 673 VGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGK 719
V T Y AP E+ D++S G + E+ + K
Sbjct: 180 VVTLWYRAP----------EVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 31/220 (14%)
Query: 514 IGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKF- 571
IG G VY+AKL SG+ +A+KK + D++ E++ + K+ H NIV+
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 91
Query: 572 YGFCSHVRHSFVVY-----EYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
Y F S VY +Y+ + A + + + +L+Y+H
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEA-RVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
I HRDI N+LLD + ++ DFG+AK L N + + + Y AP
Sbjct: 152 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPE--- 204
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGK--HPGD 723
L YT I DV+S G + E++ G+ PGD
Sbjct: 205 --LIFGATDYTSSI----DVWSAGCVLAELLLGQPIFPGD 238
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 74/170 (43%), Gaps = 19/170 (11%)
Query: 554 LNEIKALTKIRHRNIVKF-YGFCSHVRHSFVVYEYINRGSLATVLSNNFA-SEDFDWRKR 611
L E + L RH + Y F +H R FV+ EY N G L LS SED R R
Sbjct: 58 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRERVFSED---RAR 113
Query: 612 MNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTE 671
+ AL Y+H + +V+RD+ N++LD + +++DFG K + +
Sbjct: 114 F-YGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX 170
Query: 672 LVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
GT Y+AP E+ D + GV+ E++ G+ P
Sbjct: 171 FCGTPEYLAP----------EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 91/222 (40%), Gaps = 30/222 (13%)
Query: 507 DFDAKYCIGKGEHRSV--YRAKLPSGDKIAVKKFNSP--FPNDQMSDQKEFLNEIKALTK 562
DFD +GKG V R K +G A+K D+++ + E + L
Sbjct: 6 DFDYLKLLGKGTFGKVILVREK-ATGRYYAMKILRKEVIIAKDEVAHT---VTESRVLQN 61
Query: 563 IRHRNIVKF-YGFCSHVRHSFVVYEYINRGSLATVLSNN--FASEDFDWRKRMNVITGVA 619
RH + Y F +H R FV+ EY N G L LS F E R R +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERVFTEE----RARF-YGAEIV 115
Query: 620 DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYV 679
AL Y+H +V+RDI N++LD + +++DFG K + + GT Y+
Sbjct: 116 SALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYL 172
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
AP E+ D + GV+ E++ G+ P
Sbjct: 173 AP----------EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 23/192 (11%)
Query: 529 SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV--VYE 586
+G+ +AVK S + EI+ L + H +IVK+ G C V V E
Sbjct: 37 TGEMVAVKALKEGCGPQLRSG---WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVME 93
Query: 587 YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLD 646
Y+ GSL L + + + + + ++Y+H + +HR +++ NVLLD
Sbjct: 94 YVPLGSLRDYLPRHCVG----LAQLLLFAQQICEGMAYLHAQHY---IHRALAARNVLLD 146
Query: 647 LEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN--IGLHLAELAYTMKITEKCD 704
+ ++ DFG AK + P + Y G+ + + E K D
Sbjct: 147 NDRLVKIGDFGLAKAV-PEGHEY--------YRVREDGDSPVFWYAPECLKECKFYYASD 197
Query: 705 VYSFGVLALEVI 716
V+SFGV E++
Sbjct: 198 VWSFGVTLYELL 209
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 74/170 (43%), Gaps = 19/170 (11%)
Query: 554 LNEIKALTKIRHRNIVKF-YGFCSHVRHSFVVYEYINRGSLATVLSNNFA-SEDFDWRKR 611
L E + L RH + Y F +H R FV+ EY N G L LS SED R R
Sbjct: 57 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRERVFSED---RAR 112
Query: 612 MNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTE 671
+ AL Y+H + +V+RD+ N++LD + +++DFG K + +
Sbjct: 113 F-YGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX 169
Query: 672 LVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
GT Y+AP E+ D + GV+ E++ G+ P
Sbjct: 170 FCGTPEYLAP----------EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 74/170 (43%), Gaps = 19/170 (11%)
Query: 554 LNEIKALTKIRHRNIVKF-YGFCSHVRHSFVVYEYINRGSLATVLSNNFA-SEDFDWRKR 611
L E + L RH + Y F +H R FV+ EY N G L LS SED R R
Sbjct: 56 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRERVFSED---RAR 111
Query: 612 MNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTE 671
+ AL Y+H + +V+RD+ N++LD + +++DFG K + +
Sbjct: 112 F-YGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX 168
Query: 672 LVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
GT Y+AP E+ D + GV+ E++ G+ P
Sbjct: 169 FCGTPEYLAP----------EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 91/222 (40%), Gaps = 30/222 (13%)
Query: 507 DFDAKYCIGKGEHRSV--YRAKLPSGDKIAVKKFNSP--FPNDQMSDQKEFLNEIKALTK 562
DFD +GKG V R K +G A+K D+++ + E + L
Sbjct: 6 DFDYLKLLGKGTFGKVILVREK-ATGRYYAMKILRKEVIIAKDEVAHT---VTESRVLQN 61
Query: 563 IRHRNIVKF-YGFCSHVRHSFVVYEYINRGSLATVLSNN--FASEDFDWRKRMNVITGVA 619
RH + Y F +H R FV+ EY N G L LS F E R R +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERVFTEE----RARF-YGAEIV 115
Query: 620 DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYV 679
AL Y+H +V+RDI N++LD + +++DFG K + + GT Y+
Sbjct: 116 SALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYL 172
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
AP E+ D + GV+ E++ G+ P
Sbjct: 173 AP----------EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 95/224 (42%), Gaps = 27/224 (12%)
Query: 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
T ++ IG G + +VY+A+ P SG +A+K PN + + E+ L ++
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVR--VPNGEEGLPISTVREVALLRRL 60
Query: 564 R---HRNIVKFYGFCSHVRHS-----FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVI 615
H N+V+ C+ R +V+E++++ L T L + +++
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL-DKAPPPGLPAETIKDLM 118
Query: 616 TGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGT 675
L ++H +C IVHRD+ N+L+ +++DFG A++ +V T
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS-YQMALAPVVVT 174
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGK 719
Y AP E+ D++S G + E+ + K
Sbjct: 175 LWYRAP----------EVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 26/210 (12%)
Query: 513 CIGKGE----HRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNI 568
CIG+G+ H+ +Y + +A+K + + S +++FL E + + H +I
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD---SVREKFLQEALTMRQFDHPHI 73
Query: 569 VKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHD 628
VK G + +++ E G L + L S D + ++ AL+Y+
Sbjct: 74 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLESK 130
Query: 629 CFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTF--GYVAPAHGNI 686
F VHRDI++ NVL+ ++ DFG ++ ++ +S+ + G ++AP N
Sbjct: 131 RF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINF 186
Query: 687 GLHLAELAYTMKITEKCDVYSFGVLALEVI 716
+ T DV+ FGV E++
Sbjct: 187 ----------RRFTSASDVWMFGVCMWEIL 206
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 20/196 (10%)
Query: 529 SGDKIAVKKFNSP-FPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEY 587
+G K+A+K N M + E EI L +RH +I+K Y +V EY
Sbjct: 32 TGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY 89
Query: 588 INRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDL 647
++ + SE R +I+ A+ Y H IVHRD+ N+LLD
Sbjct: 90 AGNELFDYIVQRDKMSEQEARRFFQQIIS----AVEYCHRH---KIVHRDLKPENLLLDE 142
Query: 648 EYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYS 707
+++DFG + ++ + T G+ Y AP ++ + + DV+S
Sbjct: 143 HLNVKIADFGLSNIMTDGNFLKTS-CGSPNYAAP---------EVISGKLYAGPEVDVWS 192
Query: 708 FGVLALEVIKGKHPGD 723
GV+ ++ + P D
Sbjct: 193 CGVILYVMLCRRLPFD 208
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 88/222 (39%), Gaps = 41/222 (18%)
Query: 514 IGKGEHRSVYRAKL------PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRN 567
+G G VY ++ PS ++AVK ++Q D+ +FL E ++K H+N
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQ--DELDFLMEALIISKFNHQN 101
Query: 568 IVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFA----SEDFDWRKRMNVITGVADALS 623
IV+ G F++ E + G L + L ++V +A
Sbjct: 102 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 161
Query: 624 YMHHDCFPPIVHRDISSNNVLLDLEYEARVS---DFGTAKLLKPNSSNWTELVGTFGYVA 680
Y+ + F +HRDI++ N LL RV+ DFG A+ + Y A
Sbjct: 162 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDI---------------YRA 203
Query: 681 PAHGNIGLHLAELAYTMK-------ITEKCDVYSFGVLALEV 715
+ G + + + T K D +SFGVL E+
Sbjct: 204 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 245
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 26/210 (12%)
Query: 513 CIGKGE----HRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNI 568
CIG+G+ H+ +Y + +A+K + + S +++FL E + + H +I
Sbjct: 45 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD---SVREKFLQEALTMRQFDHPHI 101
Query: 569 VKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHD 628
VK G + +++ E G L + L S D + ++ AL+Y+
Sbjct: 102 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLESK 158
Query: 629 CFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTF--GYVAPAHGNI 686
F VHRDI++ NVL+ ++ DFG ++ ++ +S+ + G ++AP N
Sbjct: 159 RF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINF 214
Query: 687 GLHLAELAYTMKITEKCDVYSFGVLALEVI 716
+ T DV+ FGV E++
Sbjct: 215 ----------RRFTSASDVWMFGVCMWEIL 234
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 18/160 (11%)
Query: 559 ALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGV 618
A+ + H +IV+ G C V +Y+ GSL + + + + +N +
Sbjct: 86 AIGSLDHAHIVRLLGLCPGSSLQLVT-QYLPLGSLLDHVRQHRGA--LGPQLLLNWGVQI 142
Query: 619 ADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN--WTELVGTF 676
A + Y+ +VHR++++ NVLL + +V+DFG A LL P+ ++E
Sbjct: 143 AKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPI 199
Query: 677 GYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI 716
++A + G K T + DV+S+GV E++
Sbjct: 200 KWMALESIHFG----------KYTHQSDVWSYGVTVWELM 229
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 31/220 (14%)
Query: 514 IGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKF- 571
IG G VY+AKL SG+ +A+KK + D++ E++ + K+ H NIV+
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 158
Query: 572 YGFCSHVRHSFVVY-----EYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
Y F S VY +Y+ + A + + + +L+Y+H
Sbjct: 159 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 218
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEA-RVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
I HRDI N+LLD + ++ DFG+AK L N + + + Y AP
Sbjct: 219 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPE--- 271
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGK--HPGD 723
L YT I DV+S G + E++ G+ PGD
Sbjct: 272 --LIFGATDYTSSI----DVWSAGCVLAELLLGQPIFPGD 305
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 91/222 (40%), Gaps = 30/222 (13%)
Query: 507 DFDAKYCIGKGEHRSV--YRAKLPSGDKIAVKKFNSP--FPNDQMSDQKEFLNEIKALTK 562
DFD +GKG V R K +G A+K D+++ + E + L
Sbjct: 6 DFDYLKLLGKGTFGKVILVREK-ATGRYYAMKILRKEVIIAKDEVAHT---VTESRVLQN 61
Query: 563 IRHRNIVKF-YGFCSHVRHSFVVYEYINRGSLATVLSNN--FASEDFDWRKRMNVITGVA 619
RH + Y F +H R FV+ EY N G L LS F E R R +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERVFTEE----RARFYG-AEIV 115
Query: 620 DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYV 679
AL Y+H +V+RDI N++LD + +++DFG K + + GT Y+
Sbjct: 116 SALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYL 172
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
AP E+ D + GV+ E++ G+ P
Sbjct: 173 AP----------EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 29/207 (14%)
Query: 519 HRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHV 578
HR RA +G+ A K +P SD++ EI+ ++ +RH +V +
Sbjct: 68 HRVTERA---TGNNFAAKFVMTP----HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDD 120
Query: 579 RHSFVVYEYINRGSLATVLSN--NFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHR 636
++YE+++ G L +++ N SED + + + V L +MH + + VH
Sbjct: 121 NEMVMIYEFMSGGELFEKVADEHNKMSED----EAVEYMRQVCKGLCHMHENNY---VHL 173
Query: 637 DISSNNVLLDLEY--EARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELA 694
D+ N++ + E ++ DFG L P S GT + AP E+A
Sbjct: 174 DLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV-TTGTAEFAAP----------EVA 222
Query: 695 YTMKITEKCDVYSFGVLALEVIKGKHP 721
+ D++S GVL+ ++ G P
Sbjct: 223 EGKPVGYYTDMWSVGVLSYILLSGLSP 249
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 97/224 (43%), Gaps = 27/224 (12%)
Query: 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
T ++ IG G + +VY+A+ P SG +A+K PN + + E+ L ++
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVR--VPNGEEGLPISTVREVALLRRL 60
Query: 564 R---HRNIVKFYGFCSHVRHS-----FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVI 615
H N+V+ C+ R +V+E++++ L T L + +++
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL-DKAPPPGLPAETIKDLM 118
Query: 616 TGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGT 675
L ++H +C IVHRD+ N+L+ +++DFG A++ + + +V T
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV-T 174
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGK 719
Y AP E+ D++S G + E+ + K
Sbjct: 175 LWYRAP----------EVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 91/222 (40%), Gaps = 30/222 (13%)
Query: 507 DFDAKYCIGKGEHRSV--YRAKLPSGDKIAVKKFNSP--FPNDQMSDQKEFLNEIKALTK 562
DFD +GKG V R K +G A+K D+++ + E + L
Sbjct: 6 DFDYLKLLGKGTFGKVILVREK-ATGRYYAMKILRKEVIIAKDEVAHT---VTESRVLQN 61
Query: 563 IRHRNIVKF-YGFCSHVRHSFVVYEYINRGSLATVLSNN--FASEDFDWRKRMNVITGVA 619
RH + Y F +H R FV+ EY N G L LS F E R R +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERVFTEE----RARFYG-AEIV 115
Query: 620 DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYV 679
AL Y+H +V+RDI N++LD + +++DFG K + + GT Y+
Sbjct: 116 SALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYL 172
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
AP E+ D + GV+ E++ G+ P
Sbjct: 173 AP----------EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 88/222 (39%), Gaps = 41/222 (18%)
Query: 514 IGKGEHRSVYRAKL------PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRN 567
+G G VY ++ PS ++AVK ++Q D+ +FL E ++K H+N
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQ--DELDFLMEALIISKFNHQN 95
Query: 568 IVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFA----SEDFDWRKRMNVITGVADALS 623
IV+ G F++ E + G L + L ++V +A
Sbjct: 96 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 155
Query: 624 YMHHDCFPPIVHRDISSNNVLLDLEYEARVS---DFGTAKLLKPNSSNWTELVGTFGYVA 680
Y+ + F +HRDI++ N LL RV+ DFG A+ + Y A
Sbjct: 156 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMAQDI---------------YRA 197
Query: 681 PAHGNIGLHLAELAYTMK-------ITEKCDVYSFGVLALEV 715
+ G + + + T K D +SFGVL E+
Sbjct: 198 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 20/196 (10%)
Query: 529 SGDKIAVKKFNSP-FPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEY 587
+G K+A+K N M + E EI L +RH +I+K Y +V EY
Sbjct: 37 TGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY 94
Query: 588 INRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDL 647
++ + SE R +I+ A+ Y H IVHRD+ N+LLD
Sbjct: 95 AGNELFDYIVQRDKMSEQEARRFFQQIIS----AVEYCHRH---KIVHRDLKPENLLLDE 147
Query: 648 EYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYS 707
+++DFG + ++ + T G+ Y AP ++ + + DV+S
Sbjct: 148 HLNVKIADFGLSNIMTDGNFLKTS-CGSPNYAAP---------EVISGKLYAGPEVDVWS 197
Query: 708 FGVLALEVIKGKHPGD 723
GV+ ++ + P D
Sbjct: 198 CGVILYVMLCRRLPFD 213
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 31/220 (14%)
Query: 514 IGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKF- 571
IG G VY+AKL SG+ +A+KK + D++ E++ + K+ H NIV+
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 92
Query: 572 YGFCSHVRHSFVVY-----EYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
Y F S VY +Y+ + A + + + +L+Y+H
Sbjct: 93 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 152
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEA-RVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
I HRDI N+LLD + ++ DFG+AK L N + + + Y AP
Sbjct: 153 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPE--- 205
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGK--HPGD 723
L YT I DV+S G + E++ G+ PGD
Sbjct: 206 --LIFGATDYTSSI----DVWSAGCVLAELLLGQPIFPGD 239
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 20/196 (10%)
Query: 529 SGDKIAVKKFNSP-FPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEY 587
+G K+A+K N M + E EI L +RH +I+K Y +V EY
Sbjct: 28 TGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY 85
Query: 588 INRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDL 647
++ + SE R +I+ A+ Y H IVHRD+ N+LLD
Sbjct: 86 AGNELFDYIVQRDKMSEQEARRFFQQIIS----AVEYCHRH---KIVHRDLKPENLLLDE 138
Query: 648 EYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYS 707
+++DFG + ++ + T G+ Y AP ++ + + DV+S
Sbjct: 139 HLNVKIADFGLSNIMTDGNFLKTS-CGSPNYAAP---------EVISGKLYAGPEVDVWS 188
Query: 708 FGVLALEVIKGKHPGD 723
GV+ ++ + P D
Sbjct: 189 CGVILYVMLCRRLPFD 204
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 101/222 (45%), Gaps = 25/222 (11%)
Query: 505 TKDFDAKYCIGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
+ ++D K +GKG V R +G + A K N+ D ++ E + K+
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK--KLSARDFQKLEREARICRKL 61
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSL-ATVLSNNFASEDFDWRKRMNVITGVADAL 622
+H NIV+ + ++V++ + G L +++ F SE + I + +++
Sbjct: 62 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE----ADASHCIQQILESI 117
Query: 623 SYMHHDCFPPIVHRDISSNNVLLDLEYE---ARVSDFGTAKLLKPNSSNWTELVGTFGYV 679
+Y H + IVHR++ N+LL + + +++DFG A + +S W GT GY+
Sbjct: 118 AYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYL 173
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+P E+ ++ D+++ GV+ ++ G P
Sbjct: 174 SP----------EVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 31/220 (14%)
Query: 514 IGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKF- 571
IG G VY+AKL SG+ +A+KK + D++ E++ + K+ H NIV+
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 117
Query: 572 YGFCSHVRHSFVVY-----EYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
Y F S VY +Y+ + A + + + +L+Y+H
Sbjct: 118 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 177
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEA-RVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
I HRDI N+LLD + ++ DFG+AK L N + + + Y AP
Sbjct: 178 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPE--- 230
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGK--HPGD 723
L YT I DV+S G + E++ G+ PGD
Sbjct: 231 --LIFGATDYTSSI----DVWSAGCVLAELLLGQPIFPGD 264
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 20/196 (10%)
Query: 529 SGDKIAVKKFNSP-FPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEY 587
+G K+A+K N M + E EI L +RH +I+K Y +V EY
Sbjct: 38 TGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY 95
Query: 588 INRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDL 647
++ + SE R +I+ A+ Y H IVHRD+ N+LLD
Sbjct: 96 AGNELFDYIVQRDKMSEQEARRFFQQIIS----AVEYCHRH---KIVHRDLKPENLLLDE 148
Query: 648 EYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYS 707
+++DFG + ++ + T G+ Y AP ++ + + DV+S
Sbjct: 149 HLNVKIADFGLSNIMTDGNFLKTS-CGSPNYAAP---------EVISGKLYAGPEVDVWS 198
Query: 708 FGVLALEVIKGKHPGD 723
GV+ ++ + P D
Sbjct: 199 CGVILYVMLCRRLPFD 214
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 106
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 107 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 162
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 163 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 216
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 217 ------MHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 31/220 (14%)
Query: 514 IGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKF- 571
IG G VY+AKL SG+ +A+KK + D++ E++ + K+ H NIV+
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 84
Query: 572 YGFCSHVRHSFVVY-----EYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
Y F S VY +Y+ + A + + + +L+Y+H
Sbjct: 85 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 144
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEA-RVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
I HRDI N+LLD + ++ DFG+AK L N + + + Y AP
Sbjct: 145 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPE--- 197
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGK--HPGD 723
L YT I DV+S G + E++ G+ PGD
Sbjct: 198 --LIFGATDYTSSI----DVWSAGCVLAELLLGQPIFPGD 231
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 31/220 (14%)
Query: 514 IGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKF- 571
IG G VY+AKL SG+ +A+KK + D++ E++ + K+ H NIV+
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 113
Query: 572 YGFCSHVRHSFVVY-----EYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
Y F S VY +Y+ + A + + + +L+Y+H
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEA-RVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
I HRDI N+LLD + ++ DFG+AK L N + + + Y AP
Sbjct: 174 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPE--- 226
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGK--HPGD 723
L YT I DV+S G + E++ G+ PGD
Sbjct: 227 --LIFGATDYTSSI----DVWSAGCVLAELLLGQPIFPGD 260
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 31/220 (14%)
Query: 514 IGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKF- 571
IG G VY+AKL SG+ +A+KK + D++ E++ + K+ H NIV+
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 115
Query: 572 YGFCSHVRHSFVVY-----EYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
Y F S VY +Y+ + A + + + +L+Y+H
Sbjct: 116 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 175
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEA-RVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
I HRDI N+LLD + ++ DFG+AK L N + + + Y AP
Sbjct: 176 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPE--- 228
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGK--HPGD 723
L YT I DV+S G + E++ G+ PGD
Sbjct: 229 --LIFGATDYTSSI----DVWSAGCVLAELLLGQPIFPGD 262
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 26/210 (12%)
Query: 513 CIGKGE----HRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNI 568
CIG+G+ H+ +Y + +A+K + + S +++FL E + + H +I
Sbjct: 22 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD---SVREKFLQEALTMRQFDHPHI 78
Query: 569 VKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHD 628
VK G + +++ E G L + L S D + ++ AL+Y+
Sbjct: 79 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLESK 135
Query: 629 CFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTF--GYVAPAHGNI 686
F VHRDI++ NVL+ ++ DFG ++ ++ +S+ + G ++AP N
Sbjct: 136 RF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINF 191
Query: 687 GLHLAELAYTMKITEKCDVYSFGVLALEVI 716
+ T DV+ FGV E++
Sbjct: 192 ----------RRFTSASDVWMFGVCMWEIL 211
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 91/222 (40%), Gaps = 30/222 (13%)
Query: 507 DFDAKYCIGKGEHRSV--YRAKLPSGDKIAVKKFNSP--FPNDQMSDQKEFLNEIKALTK 562
DFD +GKG V R K +G A+K D+++ + E + L
Sbjct: 9 DFDYLKLLGKGTFGKVILVREK-ATGRYYAMKILRKEVIIAKDEVAHT---VTESRVLQN 64
Query: 563 IRHRNIVKF-YGFCSHVRHSFVVYEYINRGSLATVLSNN--FASEDFDWRKRMNVITGVA 619
RH + Y F +H R FV+ EY N G L LS F E R R +
Sbjct: 65 TRHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRERVFTEE----RARFYG-AEIV 118
Query: 620 DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYV 679
AL Y+H +V+RDI N++LD + +++DFG K + + GT Y+
Sbjct: 119 SALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYL 175
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
AP E+ D + GV+ E++ G+ P
Sbjct: 176 AP----------EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 26/210 (12%)
Query: 513 CIGKGE----HRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNI 568
CIG+G+ H+ +Y + +A+K + + S +++FL E + + H +I
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD---SVREKFLQEALTMRQFDHPHI 70
Query: 569 VKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHD 628
VK G + +++ E G L + L S D + ++ AL+Y+
Sbjct: 71 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLESK 127
Query: 629 CFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTF--GYVAPAHGNI 686
F VHRDI++ NVL+ ++ DFG ++ ++ +S+ + G ++AP N
Sbjct: 128 RF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINF 183
Query: 687 GLHLAELAYTMKITEKCDVYSFGVLALEVI 716
+ T DV+ FGV E++
Sbjct: 184 ----------RRFTSASDVWMFGVCMWEIL 203
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 26/210 (12%)
Query: 513 CIGKGE----HRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNI 568
CIG+G+ H+ +Y + +A+K + + S +++FL E + + H +I
Sbjct: 20 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD---SVREKFLQEALTMRQFDHPHI 76
Query: 569 VKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHD 628
VK G + +++ E G L + L S D + ++ AL+Y+
Sbjct: 77 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLESK 133
Query: 629 CFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTF--GYVAPAHGNI 686
F VHRDI++ NVL+ ++ DFG ++ ++ +S+ + G ++AP N
Sbjct: 134 RF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINF 189
Query: 687 GLHLAELAYTMKITEKCDVYSFGVLALEVI 716
+ T DV+ FGV E++
Sbjct: 190 ----------RRFTSASDVWMFGVCMWEIL 209
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 88/222 (39%), Gaps = 41/222 (18%)
Query: 514 IGKGEHRSVYRAKL------PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRN 567
+G G VY ++ PS ++AVK ++Q D+ +FL E ++K H+N
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQ--DELDFLMEALIISKFNHQN 121
Query: 568 IVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFA----SEDFDWRKRMNVITGVADALS 623
IV+ G F++ E + G L + L ++V +A
Sbjct: 122 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 181
Query: 624 YMHHDCFPPIVHRDISSNNVLLDLEYEARVS---DFGTAKLLKPNSSNWTELVGTFGYVA 680
Y+ + F +HRDI++ N LL RV+ DFG A+ + Y A
Sbjct: 182 YLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDI---------------YRA 223
Query: 681 PAHGNIGLHLAELAYTMK-------ITEKCDVYSFGVLALEV 715
+ G + + + T K D +SFGVL E+
Sbjct: 224 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 265
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 38/224 (16%)
Query: 513 CIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVK-- 570
IG G V++AKL D++A+KK + D++ E++ + ++H N+V
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIKKV--------LQDKRFKNRELQIMRIVKHPNVVDLK 98
Query: 571 --FYGFCSHVRHSFV--VYEYINRGSLATVLSNNFASEDFDWRKRMNVIT----GVADAL 622
FY F+ V EY+ TV + M +I + +L
Sbjct: 99 AFFYSNGDKKDEVFLNLVLEYVPE----TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSL 154
Query: 623 SYMHHDCFPPIVHRDISSNNVLLDLEYEA-RVSDFGTAKLLKPNSSNWTELVGTFGYVAP 681
+Y+H I HRDI N+LLD ++ DFG+AK+L N + + + Y AP
Sbjct: 155 AYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY-YRAP 210
Query: 682 AHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGK--HPGD 723
L YT I D++S G + E+++G+ PG+
Sbjct: 211 E-----LIFGATNYTTNI----DIWSTGCVMAELMQGQPLFPGE 245
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 108 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 163
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 164 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 217
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 218 ------MHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 37/222 (16%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY- 572
IGKG V+R K G+++AVK F+S ++ S +E EI +RH NI+ F
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIFSS---REERSWFRE--AEIYQTVMLRHENILGFIA 90
Query: 573 ------GFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
G + + ++V +Y GSL L+ + + + + A L+++H
Sbjct: 91 ADNKDNGTWTQL---WLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLH 143
Query: 627 HDCF-----PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWT------ELVGT 675
+ P I HRD+ S N+L+ ++D G A ++ +S+ T VGT
Sbjct: 144 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGT 201
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK 717
Y+AP + +++ + ++ D+Y+ G++ E+ +
Sbjct: 202 KRYMAPEVLDDSINMKHF----ESFKRADIYAMGLVFWEIAR 239
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 102/236 (43%), Gaps = 49/236 (20%)
Query: 506 KDFDAKYCIGKGEHRSVYRA--KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
++F IG+G + VY+A KL +G+ +A+KK + + + EI L ++
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTA--IREISLLKEL 66
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV--ITGVA-- 619
H NIVK ++V+E++++ D +K M+ +TG+
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFLHQ----------------DLKKFMDASALTGIPLP 110
Query: 620 ----------DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
L++ H ++HRD+ N+L++ E +++DFG A+ +
Sbjct: 111 LIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 167
Query: 670 TELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI--KGKHPGD 723
T V T Y AP + L Y+ + D++S G + E++ + PGD
Sbjct: 168 THEVVTLWYRAPE-----ILLGCKYYSTAV----DIWSLGCIFAEMVTRRALFPGD 214
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 103/254 (40%), Gaps = 39/254 (15%)
Query: 548 SDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSF-VVYEYINRGSLATVLS---NNFA 602
S+ + ++E+K L I H N+V G C+ V+ E+ G+L+T L N F
Sbjct: 72 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 131
Query: 603 S-EDF--DWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTA 659
+D D+ ++I M +HRD+++ N+LL + ++ DFG A
Sbjct: 132 PYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLA 191
Query: 660 KLL--KPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI- 716
+ + P+ + ++AP E + T + DV+SFGVL E+
Sbjct: 192 RDIYKDPDYVRKGDARLPLKWMAP----------ETIFDRVYTIQSDVWSFGVLLWEIFS 241
Query: 717 --KGKHPGDXXXXXXXXXXXINIEFNAMLDH--RLPHPSLDVQEKLISIMEVALLCLDGC 772
+PG I+ EF L R+ P E + + L C G
Sbjct: 242 LGASPYPG----------VKIDEEFXRRLKEGTRMRAPDYTTPE----MYQTMLDCWHGE 287
Query: 773 PNSRPTMQTVCQLL 786
P+ RPT + + L
Sbjct: 288 PSQRPTFSELVEHL 301
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 100/219 (45%), Gaps = 31/219 (14%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
IGKG V+R K G+++AVK F+S ++ S +E EI +RH NI+ F
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIFSS---REERSWFRE--AEIYQTVMLRHENILGFIA 103
Query: 574 FCSH----VRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDC 629
+ ++V +Y GSL L+ + + + + A L+++H +
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLHMEI 159
Query: 630 F-----PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWT------ELVGTFGY 678
P I HRD+ S N+L+ ++D G A ++ +S+ T VGT Y
Sbjct: 160 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRY 217
Query: 679 VAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK 717
+AP + +++ + ++ D+Y+ G++ E+ +
Sbjct: 218 MAPEVLDDSINMKHF----ESFKRADIYAMGLVFWEIAR 252
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 31/220 (14%)
Query: 514 IGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKF- 571
IG G VY+AKL SG+ +A+KK + D++ E++ + K+ H NIV+
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKV--------LQDKRFKNRELQIMRKLDHCNIVRLR 107
Query: 572 YGFCSHVRHSFVVY-----EYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
Y F S VY +Y+ + A + + + +L+Y+H
Sbjct: 108 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 167
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEA-RVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
I HRDI N+LLD + ++ DFG+AK L N + + + Y AP
Sbjct: 168 SFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPE--- 220
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGK--HPGD 723
L YT I DV+S G + E++ G+ PGD
Sbjct: 221 --LIFGATDYTSSI----DVWSAGCVLAELLLGQPIFPGD 254
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 103/257 (40%), Gaps = 42/257 (16%)
Query: 548 SDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSF-VVYEYINRGSLATVLS---NNFA 602
S+ + ++E+K L I H N+V G C+ V+ E+ G+L+T L N F
Sbjct: 73 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 132
Query: 603 S----EDF--DWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDF 656
ED D+ ++I M +HRD+++ N+LL + ++ DF
Sbjct: 133 PYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 192
Query: 657 GTAKLL--KPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALE 714
G A+ + P+ + ++AP E + T + DV+SFGVL E
Sbjct: 193 GLARDIXKDPDXVRKGDARLPLKWMAP----------ETIFDRVYTIQSDVWSFGVLLWE 242
Query: 715 VI---KGKHPGDXXXXXXXXXXXINIEFNAMLDH--RLPHPSLDVQEKLISIMEVALLCL 769
+ +PG I+ EF L R+ P E + + L C
Sbjct: 243 IFSLGASPYPG----------VKIDEEFCRRLKEGTRMRAPDYTTPE----MYQTMLDCW 288
Query: 770 DGCPNSRPTMQTVCQLL 786
G P+ RPT + + L
Sbjct: 289 HGEPSQRPTFSELVEHL 305
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 26/210 (12%)
Query: 513 CIGKGE----HRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNI 568
CIG+G+ H+ +Y + +A+K + + S +++FL E + + H +I
Sbjct: 19 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD---SVREKFLQEALTMRQFDHPHI 75
Query: 569 VKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHD 628
VK G + +++ E G L + L S D + ++ AL+Y+
Sbjct: 76 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLESK 132
Query: 629 CFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTF--GYVAPAHGNI 686
F VHRDI++ NVL+ ++ DFG ++ ++ +S+ + G ++AP N
Sbjct: 133 RF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINF 188
Query: 687 GLHLAELAYTMKITEKCDVYSFGVLALEVI 716
+ T DV+ FGV E++
Sbjct: 189 ----------RRFTSASDVWMFGVCMWEIL 208
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 110/260 (42%), Gaps = 41/260 (15%)
Query: 478 SKNDTRGIFHSVLDFDGKIMYEEIIRR--------TKDFDAKY-------CIGKGE---- 518
+ N+ +G+ + Y EII T+D++ + CIG+G+
Sbjct: 347 ANNEKQGVRSHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDV 406
Query: 519 HRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHV 578
H+ +Y + +A+K + + S +++FL E + + H +IVK G +
Sbjct: 407 HQGIYMSPENPAMAVAIKTCKNCTSD---SVREKFLQEALTMRQFDHPHIVKLIGVITE- 462
Query: 579 RHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDI 638
+++ E G L + L S D + ++ AL+Y+ F VHRDI
Sbjct: 463 NPVWIIMELCTLGELRSFLQVRKFS--LDLASLILYAYQLSTALAYLESKRF---VHRDI 517
Query: 639 SSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTF--GYVAPAHGNIGLHLAELAYT 696
++ NVL+ ++ DFG ++ ++ +S+ + G ++AP N
Sbjct: 518 AARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINF---------- 566
Query: 697 MKITEKCDVYSFGVLALEVI 716
+ T DV+ FGV E++
Sbjct: 567 RRFTSASDVWMFGVCMWEIL 586
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 74/170 (43%), Gaps = 19/170 (11%)
Query: 554 LNEIKALTKIRHRNIVKF-YGFCSHVRHSFVVYEYINRGSLATVLSNNFA-SEDFDWRKR 611
L E + L RH + Y F +H R FV+ EY N G L LS SED R R
Sbjct: 196 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRERVFSED---RAR 251
Query: 612 MNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTE 671
+ AL Y+H + +V+RD+ N++LD + +++DFG K + +
Sbjct: 252 F-YGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT 308
Query: 672 LVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
GT Y+AP E+ D + GV+ E++ G+ P
Sbjct: 309 FCGTPEYLAP----------EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 74/170 (43%), Gaps = 19/170 (11%)
Query: 554 LNEIKALTKIRHRNIVKF-YGFCSHVRHSFVVYEYINRGSLATVLSNNFA-SEDFDWRKR 611
L E + L RH + Y F +H R FV+ EY N G L LS SED R R
Sbjct: 199 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRERVFSED---RAR 254
Query: 612 MNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTE 671
+ AL Y+H + +V+RD+ N++LD + +++DFG K + +
Sbjct: 255 F-YGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT 311
Query: 672 LVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
GT Y+AP E+ D + GV+ E++ G+ P
Sbjct: 312 FCGTPEYLAP----------EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 18/160 (11%)
Query: 559 ALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGV 618
A+ + H +IV+ G C V +Y+ GSL + + + + +N +
Sbjct: 68 AIGSLDHAHIVRLLGLCPGSSLQLVT-QYLPLGSLLDHVRQHRGA--LGPQLLLNWGVQI 124
Query: 619 ADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN--WTELVGTF 676
A + Y+ +VHR++++ NVLL + +V+DFG A LL P+ ++E
Sbjct: 125 AKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPI 181
Query: 677 GYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI 716
++A + G K T + DV+S+GV E++
Sbjct: 182 KWMALESIHFG----------KYTHQSDVWSYGVTVWELM 211
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 97
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 98 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 153
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 154 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 207
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 208 ------MHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 101/235 (42%), Gaps = 47/235 (20%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIR 564
++F IG+G + VY+A+ +G+ +A+KK + + + EI L ++
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELN 61
Query: 565 HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV--ITGVA--- 619
H NIVK ++V+E++++ D +K M+ +TG+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ----------------DLKKFMDASALTGIPLPL 105
Query: 620 ---------DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWT 670
L++ H ++HRD+ N+L++ E +++DFG A+ +T
Sbjct: 106 IKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT 162
Query: 671 ELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI--KGKHPGD 723
V T Y AP + L Y+ + D++S G + E++ + PGD
Sbjct: 163 HEVVTLWYRAPE-----ILLGCKYYSTAV----DIWSLGCIFAEMVTRRALFPGD 208
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 94 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 149
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 203
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 204 ------MHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 95/224 (42%), Gaps = 27/224 (12%)
Query: 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
T ++ IG G + +VY+A+ P SG +A+K PN + + E+ L ++
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVR--VPNGEEGLPISTVREVALLRRL 60
Query: 564 R---HRNIVKFYGFCSHVRHS-----FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVI 615
H N+V+ C+ R +V+E++++ L T L + +++
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL-DKAPPPGLPAETIKDLM 118
Query: 616 TGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGT 675
L ++H +C IVHRD+ N+L+ +++DFG A++ +V T
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS-YQMALDPVVVT 174
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGK 719
Y AP E+ D++S G + E+ + K
Sbjct: 175 LWYRAP----------EVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 84 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 139
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 193
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 194 ------MHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 197 LDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEI 256
LDLS+ + IS+N K L L ++GN++T +P EI N S L VLDLS N + +
Sbjct: 229 LDLSNLQIFN-ISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTS-L 285
Query: 257 PMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSILEAL 308
P ELG L N ++ LP G L L++ + N L L+ L
Sbjct: 286 PAELGSCFQLKYFYFFDNMVTT-LPWEFGNLCNLQFLGVEGNPLEKQFLKIL 336
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 25/96 (26%)
Query: 42 LPPQVRNLSKLKYLDLSENELSGKIPPEIGXXXXXXXXXXXXNQFSGTFPPICNLSNLKY 101
LP +++NLS L+ LDLS N L+ +P E+G + LKY
Sbjct: 262 LPAEIKNLSNLRVLDLSHNRLTS-LPAELG-----------------------SCFQLKY 297
Query: 102 ISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQL 137
+N ++ ++P E GNL L +L ++ N Q
Sbjct: 298 FYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQF 332
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Query: 170 LVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNIT 229
L R +L N+LT + + NL+ LDLSHN + + G C +L N +T
Sbjct: 249 LTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRL-TSLPAELGSCFQLKYFYFFDNMVT 306
Query: 230 GRIPPEIGNSSQLHVLDLSSNHIAGEI 256
+P E GN L L + N + +
Sbjct: 307 -TLPWEFGNLCNLQFLGVEGNPLEKQF 332
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Query: 93 ICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPR---NICRSGLLEI 149
I NLSNL+ + L +N+L+ S+P E+G+ +L Y N T LP N+C L+
Sbjct: 266 IKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCN---LQF 320
Query: 150 LTVNDN 155
L V N
Sbjct: 321 LGVEGN 326
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 88 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 197
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 198 ------MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
IG G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 93 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 148
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 149 ADIIHRDLKPSNLAVNEDXELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 202
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 203 ------MHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 85/188 (45%), Gaps = 30/188 (15%)
Query: 529 SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYI 588
+ DKI++K S +F NE++ +T I++ + G ++ +++YEY+
Sbjct: 77 NNDKISIK-----------SKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYM 125
Query: 589 NRGSLAT------VLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNN 642
S+ VL N+ + +I V ++ SY+H++ I HRD+ +N
Sbjct: 126 ENDSILKFDEYFFVLDKNYTCF-IPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSN 182
Query: 643 VLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEK 702
+L+D ++SDFG ++ + + GT+ ++ P E +Y K
Sbjct: 183 ILMDKNGRVKLSDFGESEYMVDKKIKGSR--GTYEFMPPE-----FFSNESSYN---GAK 232
Query: 703 CDVYSFGV 710
D++S G+
Sbjct: 233 VDIWSLGI 240
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 25/211 (11%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV + + SG KIAVKK + PF + K E++ L ++H N++
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVI--- 113
Query: 573 GFCSHVRHSFVVYE----YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHD 628
G + + E Y+ + L+N + +I + L Y+H
Sbjct: 114 GLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 172
Query: 629 CFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGL 688
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP +
Sbjct: 173 --ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPE-----I 222
Query: 689 HLAELAYTMKITEKCDVYSFGVLALEVIKGK 719
L + Y M + D++S G + E++ G+
Sbjct: 223 MLNWMHYNMTV----DIWSVGCIMAELLTGR 249
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 95/230 (41%), Gaps = 38/230 (16%)
Query: 502 IRRTKDFDAKYCIGKGEH----RSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEI 557
I+ T ++ K IG G + R +++A + + AVK + +++ EI
Sbjct: 18 IQFTDGYEVKEDIGVGSYSVCKRCIHKA---TNXEFAVKIIDK--------SKRDPTEEI 66
Query: 558 KALTKI-RHRNIVKFYGFCSHVRHSFVVYEYINRGSL-ATVLSNNFASEDFDWRKRMNVI 615
+ L + +H NI+ ++ +VV E G L +L F SE R+ V+
Sbjct: 67 EILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSE----REASAVL 122
Query: 616 TGVADALSYMHHDCFPPIVHRDISSNNVLLDLE----YEARVSDFGTAKLLKPNSSNWTE 671
+ + Y+H +VHRD+ +N+L E R+ DFG AK L+ +
Sbjct: 123 FTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXT 179
Query: 672 LVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
T +VAP E+ CD++S GVL + G P
Sbjct: 180 PCYTANFVAP----------EVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 102/236 (43%), Gaps = 49/236 (20%)
Query: 506 KDFDAKYCIGKGEHRSVYRA--KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
++F IG+G + VY+A KL +G+ +A+KK + + + EI L ++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTA--IREISLLKEL 59
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV--ITGVA-- 619
H NIVK ++V+E++++ D +K M+ +TG+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQ----------------DLKKFMDASALTGIPLP 103
Query: 620 ----------DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
L++ H ++HRD+ N+L++ E +++DFG A+ +
Sbjct: 104 LIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 670 TELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI--KGKHPGD 723
T V T Y AP + L Y+ + D++S G + E++ + PGD
Sbjct: 161 THEVVTLWYRAPE-----ILLGCKYYSTAV----DIWSLGCIFAEMVTRRALFPGD 207
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 101/222 (45%), Gaps = 21/222 (9%)
Query: 506 KDFDAKYCIGKGEHRSVYRA--KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
++F IG+G + VY+A KL +G+ +A+KK + + + EI L ++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTA--IREISLLKEL 58
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALS 623
H NIVK ++V+E++++ L T + + A + + + L+
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEHVHQ-DLKTFMDAS-ALTGIPLPLIKSYLFQLLQGLA 116
Query: 624 YMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAH 683
+ H ++HRD+ N+L++ E +++DFG A+ +T V T Y AP
Sbjct: 117 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE- 172
Query: 684 GNIGLHLAELAYTMKITEKCDVYSFGVLALEVI--KGKHPGD 723
+ L Y+ + D++S G + E++ + PGD
Sbjct: 173 ----ILLGCKYYSTAV----DIWSLGCIFAEMVTRRALFPGD 206
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 102/236 (43%), Gaps = 49/236 (20%)
Query: 506 KDFDAKYCIGKGEHRSVYRA--KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
++F IG+G + VY+A KL +G+ +A+KK + + + EI L ++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTA--IREISLLKEL 59
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV--ITGVA-- 619
H NIVK ++V+E++++ D +K M+ +TG+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQ----------------DLKKFMDASALTGIPLP 103
Query: 620 ----------DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
L++ H ++HRD+ N+L++ E +++DFG A+ +
Sbjct: 104 LIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 670 TELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI--KGKHPGD 723
T V T Y AP + L Y+ + D++S G + E++ + PGD
Sbjct: 161 THEVVTLWYRAPE-----ILLGCKYYSTAV----DIWSLGCIFAEMVTRRALFPGD 207
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 95 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 150
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + + T V T Y AP I L+
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTADEMTGYVATRWYRAP---EIMLNW 204
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 205 ------MHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 102/236 (43%), Gaps = 49/236 (20%)
Query: 506 KDFDAKYCIGKGEHRSVYRA--KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
++F IG+G + VY+A KL +G+ +A+KK + + + EI L ++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTA--IREISLLKEL 58
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV--ITGVA-- 619
H NIVK ++V+E++++ D +K M+ +TG+
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQ----------------DLKKFMDASALTGIPLP 102
Query: 620 ----------DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
L++ H ++HRD+ N+L++ E +++DFG A+ +
Sbjct: 103 LIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 159
Query: 670 TELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI--KGKHPGD 723
T V T Y AP + L Y+ + D++S G + E++ + PGD
Sbjct: 160 THEVVTLWYRAPE-----ILLGCKYYSTAV----DIWSLGCIFAEMVTRRALFPGD 206
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 88 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLN- 196
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 197 -----AMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 95 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 150
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + + T V T Y AP I L+
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTADEMTGYVATRWYRAP---EIMLNW 204
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 205 ------MHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 106/257 (41%), Gaps = 45/257 (17%)
Query: 548 SDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSF-VVYEYINRGSLATVLS---NNFA 602
S+ + ++E+K L I H N+V G C+ V+ E+ G+L+T L N F
Sbjct: 72 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 131
Query: 603 S-----EDFDWRKRMNVIT-GVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDF 656
+DF + + + VA + ++ +HRD+++ N+LL + ++ DF
Sbjct: 132 PYKDLYKDFLTLEHLICYSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDF 188
Query: 657 GTAKLL--KPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALE 714
G A+ + P+ + ++AP E + T + DV+SFGVL E
Sbjct: 189 GLARDIYKDPDYVRKGDARLPLKWMAP----------ETIFDRVYTIQSDVWSFGVLLWE 238
Query: 715 VI---KGKHPGDXXXXXXXXXXXINIEFNAMLDH--RLPHPSLDVQEKLISIMEVALLCL 769
+ +PG I+ EF L R+ P E + + L C
Sbjct: 239 IFSLGASPYPG----------VKIDEEFCRRLKEGTRMRAPDYTTPE----MYQTMLDCW 284
Query: 770 DGCPNSRPTMQTVCQLL 786
G P+ RPT + + L
Sbjct: 285 HGEPSQRPTFSELVEHL 301
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 37/222 (16%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY- 572
IGKG V+R K G+++AVK F+S ++ S +E EI +RH NI+ F
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIFSS---REERSWFRE--AEIYQTVMLRHENILGFIA 67
Query: 573 ------GFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
G + + ++V +Y GSL L+ + + + + A L+++H
Sbjct: 68 ADNKDNGTWTQL---WLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLH 120
Query: 627 HDCF-----PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWT------ELVGT 675
+ P I HRD+ S N+L+ ++D G A ++ +S+ T VGT
Sbjct: 121 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGT 178
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK 717
Y+AP + +++ + ++ D+Y+ G++ E+ +
Sbjct: 179 KRYMAPEVLDDSINMKHF----ESFKRADIYAMGLVFWEIAR 216
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 95 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 150
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + + T V T Y AP I L+
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTADEMTGYVATRWYRAP---EIMLNW 204
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 205 ------MHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 102/236 (43%), Gaps = 49/236 (20%)
Query: 506 KDFDAKYCIGKGEHRSVYRA--KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
++F IG+G + VY+A KL +G+ +A+KK + + + EI L ++
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTA--IREISLLKEL 63
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV--ITGVA-- 619
H NIVK ++V+E++++ D +K M+ +TG+
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQ----------------DLKKFMDASALTGIPLP 107
Query: 620 ----------DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
L++ H ++HRD+ N+L++ E +++DFG A+ +
Sbjct: 108 LIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 164
Query: 670 TELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI--KGKHPGD 723
T V T Y AP + L Y+ + D++S G + E++ + PGD
Sbjct: 165 THEVVTLWYRAPE-----ILLGCKYYSTAV----DIWSLGCIFAEMVTRRALFPGD 211
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 102/236 (43%), Gaps = 49/236 (20%)
Query: 506 KDFDAKYCIGKGEHRSVYRA--KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
++F IG+G + VY+A KL +G+ +A+KK + + + EI L ++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTA--IREISLLKEL 58
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV--ITGVA-- 619
H NIVK ++V+E++++ D +K M+ +TG+
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQ----------------DLKKFMDASALTGIPLP 102
Query: 620 ----------DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
L++ H ++HRD+ N+L++ E +++DFG A+ +
Sbjct: 103 LIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 159
Query: 670 TELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI--KGKHPGD 723
T V T Y AP + L Y+ + D++S G + E++ + PGD
Sbjct: 160 THEVVTLWYRAPE-----ILLGCKYYSTAV----DIWSLGCIFAEMVTRRALFPGD 206
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 29/170 (17%)
Query: 618 VADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFG 677
VA + Y+ F VHRD+++ N +LD + +V+DFG A+ +++
Sbjct: 133 VARGMEYLAEQKF---VHRDLAARNCMLDESFTVKVADFGLAR----------DILDREY 179
Query: 678 YVAPAHGNIGLHLAELAY----TMKITEKCDVYSFGVLALEVI-KGKHPGDXXXXXXXXX 732
Y H + L + A T + T K DV+SFGVL E++ +G P
Sbjct: 180 YSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPP-------YRHI 232
Query: 733 XXINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTV 782
++ RLP P + L +M+ C + P RPT + +
Sbjct: 233 DPFDLTHFLAQGRRLPQPEY-CPDSLYQVMQQ---CWEADPAVRPTFRVL 278
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 37/222 (16%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY- 572
IGKG V+R K G+++AVK F+S ++ S +E EI +RH NI+ F
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIFSS---REERSWFRE--AEIYQTVMLRHENILGFIA 64
Query: 573 ------GFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
G + + ++V +Y GSL L+ + + + + A L+++H
Sbjct: 65 ADNKDNGTWTQL---WLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLH 117
Query: 627 HDCF-----PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWT------ELVGT 675
+ P I HRD+ S N+L+ ++D G A ++ +S+ T VGT
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGT 175
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK 717
Y+AP + +++ + ++ D+Y+ G++ E+ +
Sbjct: 176 KRYMAPEVLDDSINMKHF----ESFKRADIYAMGLVFWEIAR 213
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 93/216 (43%), Gaps = 25/216 (11%)
Query: 514 IGKGEHRSVYR-AKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH-RNIVKF 571
IG+G + SV + PSG +AVK+ S +QK+ L ++ + + IV+F
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDE---KEQKQLLMDLDVVMRSSDCPYIVQF 86
Query: 572 YGFCSHVRHSFVVYEYINRG------SLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
YG ++ E ++ + +VL + E + AL+++
Sbjct: 87 YGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILG-----KITLATVKALNHL 141
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGN 685
+ I+HRDI +N+LLD ++ DFG + L +S T G Y+AP
Sbjct: 142 KENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLV-DSIAKTRDAGCRPYMAPER-- 196
Query: 686 IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
I + Y + + DV+S G+ E+ G+ P
Sbjct: 197 IDPSASRQGYDV----RSDVWSLGITLYELATGRFP 228
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 98
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 99 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 154
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 155 ADIIHRDLKPSNLAVNEDXELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 208
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 209 ------MHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 110
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 111 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 166
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 167 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 220
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 221 ------MHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 100 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 155
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 209
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 210 ------MHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 37/222 (16%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY- 572
IGKG V+R K G+++AVK F+S ++ S +E EI +RH NI+ F
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIFSS---REERSWFRE--AEIYQTVMLRHENILGFIA 70
Query: 573 ------GFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
G + + ++V +Y GSL L+ + + + + A L+++H
Sbjct: 71 ADNKDNGTWTQL---WLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLH 123
Query: 627 HDCF-----PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWT------ELVGT 675
+ P I HRD+ S N+L+ ++D G A ++ +S+ T VGT
Sbjct: 124 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGT 181
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK 717
Y+AP + +++ + ++ D+Y+ G++ E+ +
Sbjct: 182 KRYMAPEVLDDSINMKHF----ESFKRADIYAMGLVFWEIAR 219
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 104/228 (45%), Gaps = 29/228 (12%)
Query: 507 DFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
+++ IG G + V A+ +G ++A+KK + F D +++ K L E+K L +H
Sbjct: 56 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAF--DVVTNAKRTLRELKILKHFKH 113
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNF-----ASEDFDWRKRMNVITGVAD 620
NI+ +R + E+ + + ++ ++ +S+ + +
Sbjct: 114 DNIIAIKDI---LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLR 170
Query: 621 ALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLL--KPNSSNW--TELVGTF 676
L YMH ++HRD+ +N+L++ E ++ DFG A+ L P + TE V T
Sbjct: 171 GLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 227
Query: 677 GYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKH--PG 722
Y AP + L L E YT I D++S G + E++ + PG
Sbjct: 228 WYRAP---ELMLSLHE--YTQAI----DLWSVGCIFGEMLARRQLFPG 266
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 88 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDXELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 197
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 198 ------MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 93 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 148
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 149 ADIIHRDLKPSNLAVNEDXELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 202
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 203 ------MHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 120/299 (40%), Gaps = 29/299 (9%)
Query: 16 TLQEFSFSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGXXXX 75
TL + F+SFPHL L+L+ N P NL L+ L L N L K+ P
Sbjct: 46 TLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRL--KLIP------- 96
Query: 76 XXXXXXXXNQFSGTFPPICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTG 135
F+G LSNL + + NK+ + +L L L + N
Sbjct: 97 -------LGVFTG-------LSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVY 142
Query: 136 QLPRNICRSGLLEILTVNDNHFLGSIPN--LRNCRSLVRAHLGRNNLTGNISEDFGIYPN 193
R LE LT+ + L SIP L + L+ L N+ F
Sbjct: 143 ISHRAFSGLNSLEQLTLEKCN-LTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR 201
Query: 194 LKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIA 253
LK L++SH + ++ N L +L ++ N+T + + L L+LS N I+
Sbjct: 202 LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIS 261
Query: 254 GEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNN---SILEALG 309
L L+ L ++ L G QL+ P A L L ++S N+L S+ ++G
Sbjct: 262 TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVG 320
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 59/148 (39%), Gaps = 2/148 (1%)
Query: 175 LGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPP 234
LG+N + ++F +P+L+ L+L+ N + L TL + N + IP
Sbjct: 39 LGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK-LIPL 97
Query: 235 EIGNS-SQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYF 293
+ S L LD+S N I + L +L L + N L RA L LE
Sbjct: 98 GVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQL 157
Query: 294 DLSSNRLNNSILEALGFMFKLFYLNFSH 321
L L + EAL + L L H
Sbjct: 158 TLEKCNLTSIPTEALSHLHGLIVLRLRH 185
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 37/222 (16%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY- 572
IGKG V+R K G+++AVK F+S ++ S +E EI +RH NI+ F
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIFSS---REERSWFRE--AEIYQTVMLRHENILGFIA 65
Query: 573 ------GFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
G + + ++V +Y GSL L+ + + + + A L+++H
Sbjct: 66 ADNKDNGTWTQL---WLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAHLH 118
Query: 627 HDCF-----PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWT------ELVGT 675
+ P I HRD+ S N+L+ ++D G A ++ +S+ T VGT
Sbjct: 119 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGT 176
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK 717
Y+AP + +++ + ++ D+Y+ G++ E+ +
Sbjct: 177 KRYMAPEVLDDSINMKHF----ESFKRADIYAMGLVFWEIAR 214
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 108 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 163
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 164 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 217
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 218 ------MHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 94 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 149
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 203
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 204 ------MHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 106
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 107 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 162
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 163 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 216
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 217 ------MHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 93/218 (42%), Gaps = 36/218 (16%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + +VY+ +G +A+K+ + + + EI + +++H NIV+ Y
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKL---DSEEGTPSTAIREISLMKELKHENIVRLY 69
Query: 573 GFCSHVRHSFVVYEYINR-----------GSLATVLSNNFASEDFDWRKRMNVITGVADA 621
+V+E+++ G+ L N F W+ +
Sbjct: 70 DVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKY-FQWQ--------LLQG 120
Query: 622 LSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAP 681
L++ H + I+HRD+ N+L++ + ++ DFG A+ + ++ V T Y AP
Sbjct: 121 LAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAP 177
Query: 682 AHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGK 719
+ + Y+ I D++S G + E+I GK
Sbjct: 178 -----DVLMGSRTYSTSI----DIWSCGCILAEMITGK 206
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 96/221 (43%), Gaps = 33/221 (14%)
Query: 514 IGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLN-EIKALTKIRHRNIVKF 571
IG G VY+AKL SG+ +A+KK + K F N E++ + K+ H NIV+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKK---------VLQGKAFKNRELQIMRKLDHCNIVRL 78
Query: 572 -YGFCSHVRHSFVVY-----EYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
Y F S VY +Y+ + A + + + +L+Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEA-RVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHG 684
H I HRDI N+LLD + ++ DFG+AK L N + + + Y AP
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPE-- 192
Query: 685 NIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGK--HPGD 723
L YT I DV+S G + E++ G+ PGD
Sbjct: 193 ---LIFGATDYTSSI----DVWSAGCVLAELLLGQPIFPGD 226
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 100 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 155
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 209
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 210 ------MHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 26/210 (12%)
Query: 513 CIGKGE----HRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNI 568
CIG+G+ H+ +Y + +A+K + + S +++FL E + + H +I
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSD---SVREKFLQEALTMRQFDHPHI 73
Query: 569 VKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHD 628
VK G + +++ E G L + L S D + ++ AL+Y+
Sbjct: 74 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFS--LDLASLILYAYQLSTALAYLESK 130
Query: 629 CFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTF--GYVAPAHGNI 686
F VHRDI++ NVL+ ++ DFG ++ ++ +S+ G ++AP N
Sbjct: 131 RF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTXXKASKGKLPIKWMAPESINF 186
Query: 687 GLHLAELAYTMKITEKCDVYSFGVLALEVI 716
+ T DV+ FGV E++
Sbjct: 187 ----------RRFTSASDVWMFGVCMWEIL 206
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 100 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 155
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 209
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 210 ------MHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 96/221 (43%), Gaps = 33/221 (14%)
Query: 514 IGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLN-EIKALTKIRHRNIVKF 571
IG G VY+AKL SG+ +A+KK + K F N E++ + K+ H NIV+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKK---------VLQGKAFKNRELQIMRKLDHCNIVRL 78
Query: 572 -YGFCSHVRHSFVVY-----EYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
Y F S VY +Y+ + A + + + +L+Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEA-RVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHG 684
H I HRDI N+LLD + ++ DFG+AK L N + + + Y AP
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPE-- 192
Query: 685 NIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGK--HPGD 723
L YT I DV+S G + E++ G+ PGD
Sbjct: 193 ---LIFGATDYTSSI----DVWSAGCVLAELLLGQPIFPGD 226
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 88 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 197
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 198 ------MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 93 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 148
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 149 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 202
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 203 ------MHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 96/221 (43%), Gaps = 33/221 (14%)
Query: 514 IGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLN-EIKALTKIRHRNIVKF 571
IG G VY+AKL SG+ +A+KK + K F N E++ + K+ H NIV+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKK---------VLQGKAFKNRELQIMRKLDHCNIVRL 78
Query: 572 -YGFCSHVRHSFVVY-----EYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYM 625
Y F S VY +Y+ + A + + + +L+Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 626 HHDCFPPIVHRDISSNNVLLDLEYEA-RVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHG 684
H I HRDI N+LLD + ++ DFG+AK L N + + + Y AP
Sbjct: 139 HSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPE-- 192
Query: 685 NIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGK--HPGD 723
L YT I DV+S G + E++ G+ PGD
Sbjct: 193 ---LIFGATDYTSSI----DVWSAGCVLAELLLGQPIFPGD 226
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 90 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 145
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 199
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 200 ------MHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 94 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 149
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 150 ADIIHRDLKPSNLAVNEDSELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 203
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 204 ------MHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 88 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGXVATRWYRAP---EIMLNW 197
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 198 ------MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 88 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 197
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 198 ------MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 88 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 197
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 198 ------MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 90 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 145
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 199
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 200 ------MHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 88 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 197
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 198 ------MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Query: 503 RRTKDFDAKYCIGKGEHRSVYR-AKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALT 561
R T +F IG GE SV++ K G A+K+ P D++ L E+ A
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGS--VDEQNALREVYAHA 65
Query: 562 KI-RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASED-FDWRKRMNVITGVA 619
+ +H ++V+++ + H + EY N GSLA +S N+ F + +++ V
Sbjct: 66 VLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 125
Query: 620 DALSYMHHDCFPPIVHRDISSNNVLL 645
L Y+H +VH DI +N+ +
Sbjct: 126 RGLRYIHSMS---LVHMDIKPSNIFI 148
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 88 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 197
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 198 ------MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 88 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 197
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 198 ------MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 103/228 (45%), Gaps = 29/228 (12%)
Query: 507 DFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH 565
+++ IG G + V A+ +G ++A+KK + F D +++ K L E+K L +H
Sbjct: 55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAF--DVVTNAKRTLRELKILKHFKH 112
Query: 566 RNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNF-----ASEDFDWRKRMNVITGVAD 620
NI+ +R + E+ + + ++ ++ +S+ + +
Sbjct: 113 DNIIAIKDI---LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLR 169
Query: 621 ALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLL--KPNSSNW--TELVGTF 676
L YMH ++HRD+ +N+L++ E ++ DFG A+ L P + TE V T
Sbjct: 170 GLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 226
Query: 677 GYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKH--PG 722
Y AP + L L E T+ D++S G + E++ + PG
Sbjct: 227 WYRAP---ELMLSLHEY------TQAIDLWSVGCIFGEMLARRQLFPG 265
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 98
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 99 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 154
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 155 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 208
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 209 ------MHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 92/212 (43%), Gaps = 27/212 (12%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 573 GFCSHVR-----HSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHH 627
+ R + + ++ L ++ ++D +I + L Y+H
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDD----HVQFLIYQILRGLKYIHS 143
Query: 628 DCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIG 687
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I
Sbjct: 144 ---ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIM 194
Query: 688 LHLAELAYTMKITEKCDVYSFGVLALEVIKGK 719
L+ M + D++S G + E++ G+
Sbjct: 195 LNW------MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 90 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 145
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 199
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 200 ------MHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 84 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 139
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 193
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 194 ------MHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 90 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 145
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 146 ADIIHRDLKPSNLAVNEDSELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 199
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 200 ------MHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 93 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 148
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 149 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 202
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 203 ------MHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 86
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 87 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 142
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 143 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 196
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 197 ------MHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 95 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 150
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 204
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 205 ------MHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 84
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 85 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 140
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 141 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 194
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 195 ------MHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 10/144 (6%)
Query: 514 IGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573
IGKG VY + ++A++ + D K F E+ A + RH N+V F G
Sbjct: 41 IGKGRFGQVYHGRWHG--EVAIRLID--IERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 574 FCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPI 633
C H ++ +L +V+ + A D K + + + Y+H I
Sbjct: 97 ACMSPPHLAIITSLCKGRTLYSVVRD--AKIVLDVNKTRQIAQEIVKGMGYLHAKG---I 151
Query: 634 VHRDISSNNVLLDLEYEARVSDFG 657
+H+D+ S NV D + ++DFG
Sbjct: 152 LHKDLKSKNVFYD-NGKVVITDFG 174
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 94 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 149
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 203
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 204 ------MHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 85
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 86 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 141
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 142 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 195
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 196 ------MHYNQTVDIWSVGCIMAELLTGR 218
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 88 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 197
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 198 ------MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 84
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 85 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 140
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 141 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 194
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 195 ------MHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Query: 503 RRTKDFDAKYCIGKGEHRSVYR-AKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALT 561
R T +F IG GE SV++ K G A+K+ P D++ L E+ A
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGS--VDEQNALREVYAHA 63
Query: 562 KI-RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASED-FDWRKRMNVITGVA 619
+ +H ++V+++ + H + EY N GSLA +S N+ F + +++ V
Sbjct: 64 VLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 123
Query: 620 DALSYMHHDCFPPIVHRDISSNNVLL 645
L Y+H +VH DI +N+ +
Sbjct: 124 RGLRYIHS---MSLVHMDIKPSNIFI 146
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Query: 503 RRTKDFDAKYCIGKGEHRSVYR-AKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALT 561
R T +F IG GE SV++ K G A+K+ P D++ L E+ A
Sbjct: 4 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGS--VDEQNALREVYAHA 61
Query: 562 KI-RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASED-FDWRKRMNVITGVA 619
+ +H ++V+++ + H + EY N GSLA +S N+ F + +++ V
Sbjct: 62 VLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 121
Query: 620 DALSYMHHDCFPPIVHRDISSNNVLL 645
L Y+H +VH DI +N+ +
Sbjct: 122 RGLRYIHSMS---LVHMDIKPSNIFI 144
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 90/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 88 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + V T Y AP I L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMAGFVATRWYRAP---EIMLNW 197
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 198 ------MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Query: 503 RRTKDFDAKYCIGKGEHRSVYR-AKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALT 561
R T +F IG GE SV++ K G A+K+ P D++ L E+ A
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGS--VDEQNALREVYAHA 63
Query: 562 KI-RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASED-FDWRKRMNVITGVA 619
+ +H ++V+++ + H + EY N GSLA +S N+ F + +++ V
Sbjct: 64 VLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 123
Query: 620 DALSYMHHDCFPPIVHRDISSNNVLL 645
L Y+H +VH DI +N+ +
Sbjct: 124 RGLRYIHS---MSLVHMDIKPSNIFI 146
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 90/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 88 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + V T Y AP I L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMAGFVATRWYRAP---EIMLNW 197
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 198 ------MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 90/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N +I + L Y+H
Sbjct: 84 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHS--- 139
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + T V T Y AP I L+
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 193
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 194 ------MHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 100/222 (45%), Gaps = 21/222 (9%)
Query: 506 KDFDAKYCIGKGEHRSVYRA--KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
++F IG+G + VY+A KL +G+ +A+KK + + + EI L ++
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTA--IREISLLKEL 62
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALS 623
H NIVK ++V+E++++ L T + + A + + + L+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKTFMDAS-ALTGIPLPLIKSYLFQLLQGLA 120
Query: 624 YMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAH 683
+ H ++HRD+ N+L++ E +++DFG A+ + V T Y AP
Sbjct: 121 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE- 176
Query: 684 GNIGLHLAELAYTMKITEKCDVYSFGVLALEVI--KGKHPGD 723
+ L Y+ + D++S G + E++ + PGD
Sbjct: 177 ----ILLGCKYYSTAV----DIWSLGCIFAEMVTRRALFPGD 210
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 90/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 84 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 139
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + V T Y AP I L+
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMAGFVATRWYRAP---EIMLNW 193
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 194 ------MHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 142/338 (42%), Gaps = 37/338 (10%)
Query: 46 VRNLSKLKYLDLSENELSGKIPPEIGXXXXXXXXXXXXNQFSGTFPPICNLSNLKYISLH 105
V L+ L ++ S N+L+ P + NQ + P+ NL+NL ++L
Sbjct: 59 VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIAD-ITPLANLTNLTGLTLF 115
Query: 106 NNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLR 165
NN+++ P + NL L+ L L +N + SGL + +N + + + L
Sbjct: 116 NNQITDIDP--LKNLTNLNRLELSSNTISDI----SALSGLTSLQQLNFGNQVTDLKPLA 169
Query: 166 NCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLD--LSHNNFYGEISSNWGKCHRLGTLIV 223
N +L R + N ++ D + L L+ ++ NN +I+ G L L +
Sbjct: 170 NLTTLERLDISSNKVS-----DISVLAKLTNLESLIATNNQISDITP-LGILTNLDELSL 223
Query: 224 SGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRA 283
+GN + + + + + L LDL++N I+ P L L L +L L NQ+S P
Sbjct: 224 NGNQL--KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP-- 277
Query: 284 LGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQEIPXXXXXXXXXXXXXX 343
L LT L +L+ N+L + + + + L YL N S P
Sbjct: 278 LAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDISPVSSLTKLQR----- 330
Query: 344 XXNLF----KGSIPSRICNLESLEKLNLSHNNISGQIP 377
LF K S S + NL ++ L+ HN IS P
Sbjct: 331 ---LFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTP 365
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 142/338 (42%), Gaps = 37/338 (10%)
Query: 46 VRNLSKLKYLDLSENELSGKIPPEIGXXXXXXXXXXXXNQFSGTFPPICNLSNLKYISLH 105
V L+ L ++ S N+L+ P + NQ + P+ NL+NL ++L
Sbjct: 59 VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIAD-ITPLANLTNLTGLTLF 115
Query: 106 NNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLR 165
NN+++ P + NL L+ L L +N + SGL + +N + + + L
Sbjct: 116 NNQITDIDP--LKNLTNLNRLELSSNTISDI----SALSGLTSLQQLNFGNQVTDLKPLA 169
Query: 166 NCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLD--LSHNNFYGEISSNWGKCHRLGTLIV 223
N +L R + N ++ D + L L+ ++ NN +I+ G L L +
Sbjct: 170 NLTTLERLDISSNKVS-----DISVLAKLTNLESLIATNNQISDITP-LGILTNLDELSL 223
Query: 224 SGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRA 283
+GN + + + + + L LDL++N I+ P L L L +L L NQ+S P
Sbjct: 224 NGNQL--KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP-- 277
Query: 284 LGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQEIPXXXXXXXXXXXXXX 343
L LT L +L+ N+L + + + + L YL N S P
Sbjct: 278 LAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDISPVSSLTKLQR----- 330
Query: 344 XXNLF----KGSIPSRICNLESLEKLNLSHNNISGQIP 377
LF K S S + NL ++ L+ HN IS P
Sbjct: 331 ---LFFSNNKVSDVSSLANLTNINWLSAGHNQISDLTP 365
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 70/179 (39%), Gaps = 37/179 (20%)
Query: 554 LNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLS-----------NNFA 602
LNE + L K+ R +V + Y Y + +L VL+ +
Sbjct: 232 LNEKQILEKVNSRFVVS------------LAYAYETKDALCLVLTLMNGGDLKFHIYHMG 279
Query: 603 SEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLL 662
F + + + L +H + IV+RD+ N+LLD R+SD G A +
Sbjct: 280 QAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLA-VH 335
Query: 663 KPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
P VGT GY+AP E+ + T D ++ G L E+I G+ P
Sbjct: 336 VPEGQTIKGRVGTVGYMAP----------EVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 101/236 (42%), Gaps = 49/236 (20%)
Query: 506 KDFDAKYCIGKGEHRSVYRA--KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
++F IG+G + VY+A KL +G+ +A+KK + + + EI L ++
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTA--IREISLLKEL 63
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV--ITGVA-- 619
H NIVK ++V+E++++ D +K M+ +TG+
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQ----------------DLKKFMDASALTGIPLP 107
Query: 620 ----------DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
L++ H ++HRD+ N+L++ E +++DFG A+ +
Sbjct: 108 LIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 164
Query: 670 TELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI--KGKHPGD 723
V T Y AP + L Y+ + D++S G + E++ + PGD
Sbjct: 165 XHEVVTLWYRAPE-----ILLGCKYYSTAV----DIWSLGCIFAEMVTRRALFPGD 211
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 90/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 108 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 163
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A + V T Y AP I L+
Sbjct: 164 ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMXGXVATRWYRAP---EIMLNW 217
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 218 ------MHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 69/167 (41%), Gaps = 14/167 (8%)
Query: 556 EIKALTKIRHRNIVKF-YGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV 614
E K L K+ R IV Y F + V+ +N G + + N ED +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVM-TIMNGGDIRYHIYN--VDEDNPGFQEPRA 291
Query: 615 ITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG 674
I A +S + H I++RD+ NVLLD + R+SD G A LK + G
Sbjct: 292 IFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG 351
Query: 675 TFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
T G++AP EL + D ++ GV E+I + P
Sbjct: 352 TPGFMAP----------ELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 70/179 (39%), Gaps = 37/179 (20%)
Query: 554 LNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLS-----------NNFA 602
LNE + L K+ R +V + Y Y + +L VL+ +
Sbjct: 232 LNEKQILEKVNSRFVVS------------LAYAYETKDALCLVLTLMNGGDLKFHIYHMG 279
Query: 603 SEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLL 662
F + + + L +H + IV+RD+ N+LLD R+SD G A +
Sbjct: 280 QAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLA-VH 335
Query: 663 KPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
P VGT GY+AP E+ + T D ++ G L E+I G+ P
Sbjct: 336 VPEGQTIKGRVGTVGYMAP----------EVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 69/167 (41%), Gaps = 14/167 (8%)
Query: 556 EIKALTKIRHRNIVKF-YGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV 614
E K L K+ R IV Y F + V+ +N G + + N ED +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVM-TIMNGGDIRYHIYN--VDEDNPGFQEPRA 291
Query: 615 ITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG 674
I A +S + H I++RD+ NVLLD + R+SD G A LK + G
Sbjct: 292 IFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG 351
Query: 675 TFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
T G++AP EL + D ++ GV E+I + P
Sbjct: 352 TPGFMAP----------ELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 69/167 (41%), Gaps = 14/167 (8%)
Query: 556 EIKALTKIRHRNIVKF-YGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV 614
E K L K+ R IV Y F + V+ +N G + + N ED +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVM-TIMNGGDIRYHIYN--VDEDNPGFQEPRA 291
Query: 615 ITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG 674
I A +S + H I++RD+ NVLLD + R+SD G A LK + G
Sbjct: 292 IFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG 351
Query: 675 TFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
T G++AP EL + D ++ GV E+I + P
Sbjct: 352 TPGFMAP----------ELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 118/289 (40%), Gaps = 35/289 (12%)
Query: 504 RTKDFDAKYCIGKGEHRSVYRAK-LPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIK-ALT 561
+ D + +G+G + V + + +PSG +AVK+ + N Q +QK L ++ ++
Sbjct: 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATV-NSQ--EQKRLLMDLDISMR 105
Query: 562 KIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRM------NVI 615
+ V FYG ++ E ++ T L + F + D + + +
Sbjct: 106 TVDCPFTVTFYGALFREGDVWICMELMD-----TSL-DKFYKQVIDKGQTIPEDILGKIA 159
Query: 616 TGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGT 675
+ AL ++H ++HRD+ +NVL++ + ++ DFG + L +S T G
Sbjct: 160 VSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV-DSVAKTIDAGC 216
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXI 735
Y+AP I L + Y++ K D++S G+ +E+ + P D +
Sbjct: 217 KPYMAPER--INPELNQKGYSV----KSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 270
Query: 736 NIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
E P P L + ++ CL RPT + Q
Sbjct: 271 VEE---------PSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 101/236 (42%), Gaps = 49/236 (20%)
Query: 506 KDFDAKYCIGKGEHRSVYRA--KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
++F IG+G + VY+A KL +G+ +A+KK + + + EI L ++
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTA--IREISLLKEL 62
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV--ITGVA-- 619
H NIVK ++V+E++++ D +K M+ +TG+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEHVDQ----------------DLKKFMDASALTGIPLP 106
Query: 620 ----------DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
L++ H ++HRD+ N+L++ E +++DFG A+ +
Sbjct: 107 LIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 163
Query: 670 TELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI--KGKHPGD 723
V T Y AP + L Y+ + D++S G + E++ + PGD
Sbjct: 164 XHEVVTLWYRAPE-----ILLGCKYYSTAV----DIWSLGCIFAEMVTRRALFPGD 210
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 69/167 (41%), Gaps = 14/167 (8%)
Query: 556 EIKALTKIRHRNIVKF-YGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV 614
E K L K+ R IV Y F + V+ +N G + + N ED +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVM-TIMNGGDIRYHIYN--VDEDNPGFQEPRA 291
Query: 615 ITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG 674
I A +S + H I++RD+ NVLLD + R+SD G A LK + G
Sbjct: 292 IFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG 351
Query: 675 TFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
T G++AP EL + D ++ GV E+I + P
Sbjct: 352 TPGFMAP----------ELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 110
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 111 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 166
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DFG A+ + V T Y AP I L+
Sbjct: 167 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGY---VATRWYRAP---EIMLNW 220
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 221 ------MHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 101/236 (42%), Gaps = 49/236 (20%)
Query: 506 KDFDAKYCIGKGEHRSVYRA--KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
++F IG+G + VY+A KL +G+ +A+KK + + + EI L ++
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTA--IREISLLKEL 62
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV--ITGVA-- 619
H NIVK ++V+E++++ D +K M+ +TG+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQ----------------DLKKFMDASALTGIPLP 106
Query: 620 ----------DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
L++ H ++HRD+ N+L++ E +++DFG A+ +
Sbjct: 107 LIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 163
Query: 670 TELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI--KGKHPGD 723
V T Y AP + L Y+ + D++S G + E++ + PGD
Sbjct: 164 XHEVVTLWYRAPE-----ILLGCKYYSTAV----DIWSLGCIFAEMVTRRALFPGD 210
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 88 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ D+G A + T V T Y AP I L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDYGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 197
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 198 ------MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 87/219 (39%), Gaps = 17/219 (7%)
Query: 504 RTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTK- 562
+ DF IGKG V A+ + + K + ++K ++E L K
Sbjct: 36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKN 95
Query: 563 IRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADAL 622
++H +V + + V +YIN G L L + R R +A AL
Sbjct: 96 VKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCF--LEPRARFYA-AEIASAL 152
Query: 623 SYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPA 682
Y+H IV+RD+ N+LLD + ++DFG K ++S + GT Y+AP
Sbjct: 153 GYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAP- 208
Query: 683 HGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
E+ + D + G + E++ G P
Sbjct: 209 ---------EVLHKQPYDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 101/236 (42%), Gaps = 49/236 (20%)
Query: 506 KDFDAKYCIGKGEHRSVYRA--KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
++F IG+G + VY+A KL +G+ +A+KK + + + EI L ++
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTA--IREISLLKEL 62
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV--ITGVA-- 619
H NIVK ++V+E++++ D +K M+ +TG+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQ----------------DLKKFMDASALTGIPLP 106
Query: 620 ----------DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
L++ H ++HRD+ N+L++ E +++DFG A+ +
Sbjct: 107 LIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 163
Query: 670 TELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI--KGKHPGD 723
V T Y AP + L Y+ + D++S G + E++ + PGD
Sbjct: 164 XHEVVTLWYRAPE-----ILLGCKYYSTAV----DIWSLGCIFAEMVTRRALFPGD 210
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 101/236 (42%), Gaps = 49/236 (20%)
Query: 506 KDFDAKYCIGKGEHRSVYRA--KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
++F IG+G + VY+A KL +G+ +A+KK + + + EI L ++
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTA--IREISLLKEL 61
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV--ITGVA-- 619
H NIVK ++V+E++++ D +K M+ +TG+
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQ----------------DLKKFMDASALTGIPLP 105
Query: 620 ----------DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
L++ H ++HRD+ N+L++ E +++DFG A+ +
Sbjct: 106 LIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 162
Query: 670 TELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI--KGKHPGD 723
V T Y AP + L Y+ + D++S G + E++ + PGD
Sbjct: 163 XHEVVTLWYRAPE-----ILLGCKYYSTAV----DIWSLGCIFAEMVTRRALFPGD 209
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 101/236 (42%), Gaps = 49/236 (20%)
Query: 506 KDFDAKYCIGKGEHRSVYRA--KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
++F IG+G + VY+A KL +G+ +A+KK + + + EI L ++
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTA--IREISLLKEL 61
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV--ITGVA-- 619
H NIVK ++V+E++++ D +K M+ +TG+
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQ----------------DLKKFMDASALTGIPLP 105
Query: 620 ----------DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
L++ H ++HRD+ N+L++ E +++DFG A+ +
Sbjct: 106 LIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 162
Query: 670 TELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI--KGKHPGD 723
V T Y AP + L Y+ + D++S G + E++ + PGD
Sbjct: 163 XHEVVTLWYRAPE-----ILLGCKYYSTAV----DIWSLGCIFAEMVTRRALFPGD 209
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 101/236 (42%), Gaps = 49/236 (20%)
Query: 506 KDFDAKYCIGKGEHRSVYRA--KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
++F IG+G + VY+A KL +G+ +A+KK + + + EI L ++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTA--IREISLLKEL 59
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV--ITGVA-- 619
H NIVK ++V+E++++ D +K M+ +TG+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQ----------------DLKKFMDASALTGIPLP 103
Query: 620 ----------DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
L++ H ++HRD+ N+L++ E +++DFG A+ +
Sbjct: 104 LIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 670 TELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI--KGKHPGD 723
V T Y AP + L Y+ + D++S G + E++ + PGD
Sbjct: 161 XHEVVTLWYRAPE-----ILLGCKYYSTAV----DIWSLGCIFAEMVTRRALFPGD 207
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 100/235 (42%), Gaps = 47/235 (20%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIR 564
++F IG+G + VY+A+ +G+ +A+KK + + + EI L ++
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELN 61
Query: 565 HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV--ITGVA--- 619
H NIVK ++V+E++++ D +K M+ +TG+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ----------------DLKKFMDASALTGIPLPL 105
Query: 620 ---------DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWT 670
L++ H ++HRD+ N+L++ E +++DFG A+ +
Sbjct: 106 IKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX 162
Query: 671 ELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI--KGKHPGD 723
V T Y AP + L Y+ + D++S G + E++ + PGD
Sbjct: 163 HEVVTLWYRAPE-----ILLGCKYYSTAV----DIWSLGCIFAEMVTRRALFPGD 208
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 91/227 (40%), Gaps = 40/227 (17%)
Query: 507 DFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHR 566
DF IG G V++AK K V K + N++ E+KAL K+ H
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIK-RVKYNNEKAE------REVKALAKLDHV 64
Query: 567 NIVKFYGFC-----------------SHVRHSFVVYEYINRGSLATVLSNNFASEDFDWR 609
NIV + G C S + F+ E+ ++G+L + E D
Sbjct: 65 NIVHYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR-RGEKLDKV 122
Query: 610 KRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
+ + + + Y+H +++RD+ +N+ L + ++ DFG LK N
Sbjct: 123 LALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLK-NDGKR 178
Query: 670 TELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI 716
GT Y++P E + ++ D+Y+ G++ E++
Sbjct: 179 XRSKGTLRYMSP----------EQISSQDYGKEVDLYALGLILAELL 215
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 100/235 (42%), Gaps = 47/235 (20%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIR 564
++F IG+G + VY+A+ +G+ +A+KK + + + EI L ++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELN 60
Query: 565 HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV--ITGVA--- 619
H NIVK ++V+E++++ D +K M+ +TG+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ----------------DLKKFMDASALTGIPLPL 104
Query: 620 ---------DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWT 670
L++ H ++HRD+ N+L++ E +++DFG A+ +
Sbjct: 105 IKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX 161
Query: 671 ELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI--KGKHPGD 723
V T Y AP + L Y+ + D++S G + E++ + PGD
Sbjct: 162 HEVVTLWYRAPE-----ILLGCKYYSTAV----DIWSLGCIFAEMVTRRALFPGD 207
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 100/235 (42%), Gaps = 47/235 (20%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIR 564
++F IG+G + VY+A+ +G+ +A+KK + + + EI L ++
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELN 61
Query: 565 HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV--ITGVA--- 619
H NIVK ++V+E++++ D +K M+ +TG+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ----------------DLKKFMDASALTGIPLPL 105
Query: 620 ---------DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWT 670
L++ H ++HRD+ N+L++ E +++DFG A+ +
Sbjct: 106 IKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX 162
Query: 671 ELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI--KGKHPGD 723
V T Y AP + L Y+ + D++S G + E++ + PGD
Sbjct: 163 HEVVTLWYRAPE-----ILLGCKYYSTAV----DIWSLGCIFAEMVTRRALFPGD 208
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 101/236 (42%), Gaps = 49/236 (20%)
Query: 506 KDFDAKYCIGKGEHRSVYRA--KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
++F IG+G + VY+A KL +G+ +A+KK + + + EI L ++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTA--IREISLLKEL 58
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV--ITGVA-- 619
H NIVK ++V+E++++ D +K M+ +TG+
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQ----------------DLKKFMDASALTGIPLP 102
Query: 620 ----------DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
L++ H ++HRD+ N+L++ E +++DFG A+ +
Sbjct: 103 LIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 159
Query: 670 TELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI--KGKHPGD 723
V T Y AP + L Y+ + D++S G + E++ + PGD
Sbjct: 160 XHEVVTLWYRAPE-----ILLGCKYYSTAV----DIWSLGCIFAEMVTRRALFPGD 206
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 101/236 (42%), Gaps = 49/236 (20%)
Query: 506 KDFDAKYCIGKGEHRSVYRA--KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
++F IG+G + VY+A KL +G+ +A+KK + + + EI L ++
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTA--IREISLLKEL 61
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV--ITGVA-- 619
H NIVK ++V+E++++ D +K M+ +TG+
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQ----------------DLKKFMDASALTGIPLP 105
Query: 620 ----------DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
L++ H ++HRD+ N+L++ E +++DFG A+ +
Sbjct: 106 LIKSYLFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTY 162
Query: 670 TELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI--KGKHPGD 723
V T Y AP + L Y+ + D++S G + E++ + PGD
Sbjct: 163 XHEVVTLWYRAPE-----ILLGCKYYSTAV----DIWSLGCIFAEMVTRRALFPGD 209
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 101/236 (42%), Gaps = 49/236 (20%)
Query: 506 KDFDAKYCIGKGEHRSVYRA--KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
++F IG+G + VY+A KL +G+ +A+KK + + + EI L ++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTA--IREISLLKEL 59
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV--ITGVA-- 619
H NIVK ++V+E++++ D +K M+ +TG+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQ----------------DLKKFMDASALTGIPLP 103
Query: 620 ----------DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
L++ H ++HRD+ N+L++ E +++DFG A+ +
Sbjct: 104 LIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 670 TELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI--KGKHPGD 723
V T Y AP + L Y+ + D++S G + E++ + PGD
Sbjct: 161 XHEVVTLWYRAPE-----ILLGCKYYSTAV----DIWSLGCIFAEMVTRRALFPGD 207
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 101/236 (42%), Gaps = 49/236 (20%)
Query: 506 KDFDAKYCIGKGEHRSVYRA--KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
++F IG+G + VY+A KL +G+ +A+KK + + + EI L ++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTA--IREISLLKEL 58
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV--ITGVA-- 619
H NIVK ++V+E++++ D +K M+ +TG+
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQ----------------DLKKFMDASALTGIPLP 102
Query: 620 ----------DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
L++ H ++HRD+ N+L++ E +++DFG A+ +
Sbjct: 103 LIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 159
Query: 670 TELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI--KGKHPGD 723
V T Y AP + L Y+ + D++S G + E++ + PGD
Sbjct: 160 XHEVVTLWYRAPE-----ILLGCKYYSTAV----DIWSLGCIFAEMVTRRALFPGD 206
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 101/236 (42%), Gaps = 49/236 (20%)
Query: 506 KDFDAKYCIGKGEHRSVYRA--KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
++F IG+G + VY+A KL +G+ +A+ K + + + EI L ++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALXKIRLDTETEGVPSTA--IREISLLKEL 59
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV--ITGVA-- 619
H NIVK ++V+E++++ D +K M+ +TG+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQ----------------DLKKFMDASALTGIPLP 103
Query: 620 ----------DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
L++ H ++HRD+ N+L++ E +++DFG A+ +
Sbjct: 104 LIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 670 TELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI--KGKHPGD 723
T V T Y AP + L Y+ + D++S G + E++ + PGD
Sbjct: 161 THEVVTLWYRAPE-----ILLGCKYYSTAV----DIWSLGCIFAEMVTRRALFPGD 207
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 101/236 (42%), Gaps = 49/236 (20%)
Query: 506 KDFDAKYCIGKGEHRSVYRA--KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
++F IG+G + VY+A KL +G+ +A+ K + + + EI L ++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALXKIRLDTETEGVPSTA--IREISLLKEL 58
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV--ITGVA-- 619
H NIVK ++V+E++++ D +K M+ +TG+
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFLHQ----------------DLKKFMDASALTGIPLP 102
Query: 620 ----------DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
L++ H ++HRD+ N+L++ E +++DFG A+ +
Sbjct: 103 LIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 159
Query: 670 TELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI--KGKHPGD 723
T V T Y AP + L Y+ + D++S G + E++ + PGD
Sbjct: 160 THEVVTLWYRAPE-----ILLGCKYYSTAV----DIWSLGCIFAEMVTRRALFPGD 206
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 100/235 (42%), Gaps = 47/235 (20%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIR 564
++F IG+G + VY+A+ +G+ +A+KK + + + EI L ++
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELN 61
Query: 565 HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV--ITGVA--- 619
H NIVK ++V+E++++ D +K M+ +TG+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ----------------DLKKFMDASALTGIPLPL 105
Query: 620 ---------DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWT 670
L++ H ++HRD+ N+L++ E +++DFG A+ +
Sbjct: 106 IKSYLFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYX 162
Query: 671 ELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI--KGKHPGD 723
V T Y AP + L Y+ + D++S G + E++ + PGD
Sbjct: 163 HEVVTLWYRAPE-----ILLGCKYYSTAV----DIWSLGCIFAEMVTRRALFPGD 208
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 100/236 (42%), Gaps = 49/236 (20%)
Query: 506 KDFDAKYCIGKGEHRSVYRA--KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
++F IG+G + VY+A KL +G+ +A+KK + + + EI L ++
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTA--IREISLLKEL 62
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV--ITGVA-- 619
H NIVK ++V+E+++ D +K M+ +TG+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLS----------------MDLKKFMDASALTGIPLP 106
Query: 620 ----------DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
L++ H ++HRD+ N+L++ E +++DFG A+ +
Sbjct: 107 LIKSYLFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTY 163
Query: 670 TELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI--KGKHPGD 723
V T Y AP + L Y+ + D++S G + E++ + PGD
Sbjct: 164 XHEVVTLWYRAPE-----ILLGCKYYSTAV----DIWSLGCIFAEMVTRRALFPGD 210
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 101/236 (42%), Gaps = 49/236 (20%)
Query: 506 KDFDAKYCIGKGEHRSVYRA--KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
++F IG+G + VY+A KL +G+ +A+KK + + + EI L ++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTA--IREISLLKEL 59
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV--ITGVA-- 619
H NIVK ++V+E++++ D +K M+ +TG+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQ----------------DLKKFMDASALTGIPLP 103
Query: 620 ----------DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
L++ H ++HRD+ N+L++ E +++DFG A+ +
Sbjct: 104 LIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 670 TELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI--KGKHPGD 723
V T Y AP + L Y+ + D++S G + E++ + PGD
Sbjct: 161 XHEVVTLWYRAPE-----ILLGCKYYSTAV----DIWSLGCIFAEMVTRRALFPGD 207
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 100/236 (42%), Gaps = 49/236 (20%)
Query: 506 KDFDAKYCIGKGEHRSVYRA--KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
++F IG+G + VY+A KL +G+ +A+KK + + + EI L ++
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTA--IREISLLKEL 60
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV--ITGVA-- 619
H NIVK ++V+E+++ D +K M+ +TG+
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLS----------------MDLKKFMDASALTGIPLP 104
Query: 620 ----------DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNW 669
L++ H ++HRD+ N+L++ E +++DFG A+ +
Sbjct: 105 LIKSYLFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTY 161
Query: 670 TELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI--KGKHPGD 723
V T Y AP + L Y+ + D++S G + E++ + PGD
Sbjct: 162 XHEVVTLWYRAPE-----ILLGCKYYSTAV----DIWSLGCIFAEMVTRRALFPGD 208
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 28/192 (14%)
Query: 533 IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCS------HVRHSFVVYE 586
+A+KK + PF N + K E+ + + H+NI+ + + ++V E
Sbjct: 52 VAIKKLSRPFQNQ--THAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 587 YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLD 646
++ +L+ V+ E RM+ + + L + H I+HRD+ +N+++
Sbjct: 110 LMD-ANLSQVIQMELDHE------RMSYL--LYQMLVGIKHLHSAGIIHRDLKPSNIVVK 160
Query: 647 LEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVY 706
+ ++ DFG A+ S T V T Y AP E+ M E D++
Sbjct: 161 SDATLKILDFGLARTAG-TSFMMTPYVVTRYYRAP----------EVILGMGYKENVDIW 209
Query: 707 SFGVLALEVIKG 718
S GV+ E+IKG
Sbjct: 210 SVGVIMGEMIKG 221
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 28/192 (14%)
Query: 533 IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCS------HVRHSFVVYE 586
+A+KK + PF N + K E+ + + H+NI+ + + ++V E
Sbjct: 52 VAIKKLSRPFQNQ--THAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 587 YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLD 646
++ +L+ V+ E RM+ + + L + H I+HRD+ +N+++
Sbjct: 110 LMD-ANLSQVIQMELDHE------RMSYL--LYQMLVGIKHLHSAGIIHRDLKPSNIVVK 160
Query: 647 LEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVY 706
+ ++ DFG A+ S T V T Y AP E+ M E D++
Sbjct: 161 SDATLKILDFGLARTAG-TSFMMTPYVVTRYYRAP----------EVILGMGYKENVDIW 209
Query: 707 SFGVLALEVIKG 718
S GV+ E+IKG
Sbjct: 210 SVGVIMGEMIKG 221
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 26/154 (16%)
Query: 572 YGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWR-KRMNVITGVADALSYMHHDCF 630
Y F + + SF++ + +N G L LS + + D R +I G L +MH+
Sbjct: 259 YAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG----LEHMHNRF- 312
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTA---KLLKPNSSNWTELVGTFGYVAPAHGNIG 687
+V+RD+ N+LLD R+SD G A KP++S VGT GY+AP G
Sbjct: 313 --VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYMAPEVLQKG 365
Query: 688 LHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+AY D +S G + ++++G P
Sbjct: 366 -----VAY----DSSADWFSLGCMLFKLLRGHSP 390
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 26/154 (16%)
Query: 572 YGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWR-KRMNVITGVADALSYMHHDCF 630
Y F + + SF++ + +N G L LS + + D R +I G L +MH+
Sbjct: 258 YAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG----LEHMHNRF- 311
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTA---KLLKPNSSNWTELVGTFGYVAPAHGNIG 687
+V+RD+ N+LLD R+SD G A KP++S VGT GY+AP G
Sbjct: 312 --VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYMAPEVLQKG 364
Query: 688 LHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+AY D +S G + ++++G P
Sbjct: 365 -----VAY----DSSADWFSLGCMLFKLLRGHSP 389
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 143/340 (42%), Gaps = 40/340 (11%)
Query: 46 VRNLSKLKYLDLSENELSGKIPPEIGXXXXXXXXXXXXNQFSGTFPPICNLSNLKYISLH 105
V L+ L ++ S N+L+ P + NQ + P+ NL+NL ++L
Sbjct: 59 VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIAD-ITPLANLTNLTGLTLF 115
Query: 106 NNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGL--LEILTVNDNHFLGSIPN 163
NN+++ P + NL L+ L L +N + SGL L+ L+ + N P
Sbjct: 116 NNQITDIDP--LKNLTNLNRLELSSNTISDI----SALSGLTSLQQLSFSSNQVTDLKP- 168
Query: 164 LRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLD--LSHNNFYGEISSNWGKCHRLGTL 221
L N +L R + N ++ D + L L+ ++ NN +I+ G L L
Sbjct: 169 LANLTTLERLDISSNKVS-----DISVLAKLTNLESLIATNNQISDITP-LGILTNLDEL 222
Query: 222 IVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLP 281
++GN + + + + + L LDL++N I+ P L L L +L L NQ+S P
Sbjct: 223 SLNGNQL--KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP 278
Query: 282 RALGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQEIPXXXXXXXXXXXX 341
L LT L +L+ N+L + + + + L YL N S P
Sbjct: 279 --LAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDISPVSSLTKLQR--- 331
Query: 342 XXXXNLF----KGSIPSRICNLESLEKLNLSHNNISGQIP 377
LF K S S + NL ++ L+ HN IS P
Sbjct: 332 -----LFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTP 366
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 76/176 (43%), Gaps = 30/176 (17%)
Query: 555 NEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV 614
EI+ L K+ H I+K F ++V E + G L + N KR+
Sbjct: 70 TEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGN---------KRLKE 119
Query: 615 IT------GVADALSYMHHDCFPPIVHRDISSNNVLLDLEYE---ARVSDFGTAKLLKPN 665
T + A+ Y+H + I+HRD+ NVLL + E +++DFG +K+L
Sbjct: 120 ATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 176
Query: 666 SSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
S T L GT Y+AP + + + Y + D +S GV+ + G P
Sbjct: 177 SLMRT-LCGTPTYLAP---EVLVSVGTAGYNRAV----DCWSLGVILFICLSGYPP 224
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 26/154 (16%)
Query: 572 YGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWR-KRMNVITGVADALSYMHHDCF 630
Y F + + SF++ + +N G L LS + + D R +I G L +MH+
Sbjct: 259 YAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG----LEHMHNRF- 312
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTA---KLLKPNSSNWTELVGTFGYVAPAHGNIG 687
+V+RD+ N+LLD R+SD G A KP++S VGT GY+AP G
Sbjct: 313 --VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYMAPEVLQKG 365
Query: 688 LHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+AY D +S G + ++++G P
Sbjct: 366 -----VAY----DSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 26/154 (16%)
Query: 572 YGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWR-KRMNVITGVADALSYMHHDCF 630
Y F + + SF++ + +N G L LS + + D R +I G L +MH+
Sbjct: 259 YAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG----LEHMHNRF- 312
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTA---KLLKPNSSNWTELVGTFGYVAPAHGNIG 687
+V+RD+ N+LLD R+SD G A KP++S VGT GY+AP G
Sbjct: 313 --VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYMAPEVLQKG 365
Query: 688 LHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+AY D +S G + ++++G P
Sbjct: 366 -----VAY----DSSADWFSLGCMLFKLLRGHSP 390
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 143/340 (42%), Gaps = 40/340 (11%)
Query: 46 VRNLSKLKYLDLSENELSGKIPPEIGXXXXXXXXXXXXNQFSGTFPPICNLSNLKYISLH 105
V L+ L ++ S N+L+ P + NQ + P+ NL+NL ++L
Sbjct: 59 VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIAD-ITPLANLTNLTGLTLF 115
Query: 106 NNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGL--LEILTVNDNHFLGSIPN 163
NN+++ P + NL L+ L L +N + SGL L+ L+ + N P
Sbjct: 116 NNQITDIDP--LKNLTNLNRLELSSNTISDI----SALSGLTSLQQLSFSSNQVTDLKP- 168
Query: 164 LRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLD--LSHNNFYGEISSNWGKCHRLGTL 221
L N +L R + N ++ D + L L+ ++ NN +I+ G L L
Sbjct: 169 LANLTTLERLDISSNKVS-----DISVLAKLTNLESLIATNNQISDITP-LGILTNLDEL 222
Query: 222 IVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLP 281
++GN + + + + + L LDL++N I+ P L L L +L L NQ+S P
Sbjct: 223 SLNGNQL--KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP 278
Query: 282 RALGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQEIPXXXXXXXXXXXX 341
L LT L +L+ N+L + + + + L YL N S P
Sbjct: 279 --LAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDISPVSSLTKLQR--- 331
Query: 342 XXXXNLF----KGSIPSRICNLESLEKLNLSHNNISGQIP 377
LF K S S + NL ++ L+ HN IS P
Sbjct: 332 -----LFFSNNKVSDVSSLANLTNINWLSAGHNQISDLTP 366
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 76/176 (43%), Gaps = 30/176 (17%)
Query: 555 NEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV 614
EI+ L K+ H I+K F ++V E + G L + N KR+
Sbjct: 63 TEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGN---------KRLKE 112
Query: 615 IT------GVADALSYMHHDCFPPIVHRDISSNNVLLDLEYE---ARVSDFGTAKLLKPN 665
T + A+ Y+H + I+HRD+ NVLL + E +++DFG +K+L
Sbjct: 113 ATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 169
Query: 666 SSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
S T L GT Y+AP + + + Y + D +S GV+ + G P
Sbjct: 170 SLMRT-LCGTPTYLAP---EVLVSVGTAGYNRAV----DCWSLGVILFICLSGYPP 217
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 21/183 (11%)
Query: 543 PNDQMSDQKEFLNEIKALTKIRHRNIVKFYG--FCSHVRHSFVVYEYINRGSLATVLSNN 600
PN + + +KE I+ L ++RH+N+++ + + ++V EY G + ++
Sbjct: 47 PNGEANVKKE----IQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEML--DS 100
Query: 601 FASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAK 660
+ F + + D L Y+H IVH+DI N+LL ++S G A+
Sbjct: 101 VPEKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAE 157
Query: 661 LLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITE--KCDVYSFGVLALEVIKG 718
L P +++ T + G+ E+A + K D++S GV + G
Sbjct: 158 ALHPFAADDT--------CRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG 209
Query: 719 KHP 721
+P
Sbjct: 210 LYP 212
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 76/176 (43%), Gaps = 30/176 (17%)
Query: 555 NEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV 614
EI+ L K+ H I+K F ++V E + G L + N KR+
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGN---------KRLKE 113
Query: 615 IT------GVADALSYMHHDCFPPIVHRDISSNNVLLDLEYE---ARVSDFGTAKLLKPN 665
T + A+ Y+H + I+HRD+ NVLL + E +++DFG +K+L
Sbjct: 114 ATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
Query: 666 SSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
S T L GT Y+AP + + + Y + D +S GV+ + G P
Sbjct: 171 SLMRT-LCGTPTYLAP---EVLVSVGTAGYNRAV----DCWSLGVILFICLSGYPP 218
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 80/179 (44%), Gaps = 22/179 (12%)
Query: 547 MSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSL-ATVLSNNFASED 605
M D++E NEI + ++ H N+++ Y +V EY++ G L ++ ++ +
Sbjct: 127 MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTE 186
Query: 606 FDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLL---DLEYEARVSDFGTAKLL 662
D + + + + + +MH I+H D+ N+L D + + ++ DFG A+
Sbjct: 187 LD---TILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAK-QIKIIDFGLARRY 239
Query: 663 KPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
KP GT ++AP N ++ D++S GV+A ++ G P
Sbjct: 240 KPREKLKVNF-GTPEFLAPEVVNYDF----------VSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 33/203 (16%)
Query: 532 KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY--------------GFCSH 577
++A+KK P K L EIK + ++ H NIVK + G +
Sbjct: 38 RVAIKKIVLTDPQSV----KHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTE 93
Query: 578 VRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRD 637
+ ++V EY+ LA VL E+ ++ G L Y+H ++HRD
Sbjct: 94 LNSVYIVQEYMET-DLANVLEQGPLLEEHARLFMYQLLRG----LKYIHS---ANVLHRD 145
Query: 638 ISSNNVLLDLE-YEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYT 696
+ N+ ++ E ++ DFG A+++ P+ S+ L + G V + + L L+ YT
Sbjct: 146 LKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHL--SEGLVTKWYRSPRLLLSPNNYT 203
Query: 697 MKITEKCDVYSFGVLALEVIKGK 719
I D+++ G + E++ GK
Sbjct: 204 KAI----DMWAAGCIFAEMLTGK 222
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 76/176 (43%), Gaps = 30/176 (17%)
Query: 555 NEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV 614
EI+ L K+ H I+K F ++V E + G L + N KR+
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGN---------KRLKE 113
Query: 615 IT------GVADALSYMHHDCFPPIVHRDISSNNVLLDLEYE---ARVSDFGTAKLLKPN 665
T + A+ Y+H + I+HRD+ NVLL + E +++DFG +K+L
Sbjct: 114 ATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
Query: 666 SSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
S T L GT Y+AP + + + Y + D +S GV+ + G P
Sbjct: 171 SLMRT-LCGTPTYLAP---EVLVSVGTAGYNRAV----DCWSLGVILFICLSGYPP 218
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 76/176 (43%), Gaps = 30/176 (17%)
Query: 555 NEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV 614
EI+ L K+ H I+K F ++V E + G L + N KR+
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGN---------KRLKE 113
Query: 615 IT------GVADALSYMHHDCFPPIVHRDISSNNVLLDLEYE---ARVSDFGTAKLLKPN 665
T + A+ Y+H + I+HRD+ NVLL + E +++DFG +K+L
Sbjct: 114 ATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
Query: 666 SSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
S T L GT Y+AP + + + Y + D +S GV+ + G P
Sbjct: 171 SLMRT-LCGTPTYLAP---EVLVSVGTAGYNRAV----DCWSLGVILFICLSGYPP 218
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 514 IGKGEHRSVYRAK-LPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
IG+G + +V++AK + + +A+K+ +D L EI L +++H+NIV+ +
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVR--LDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 573 GFCSHVRHSFVVYEYINRGSLATVLSNNFAS--EDFDWRKRMNVITGVADALSYMHHDCF 630
+ +V+E+ ++ L F S D D + + + L + H
Sbjct: 68 DVLHSDKKLTLVFEFCDQD-----LKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR-- 120
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
++HRD+ N+L++ E +++DFG A+ ++ V T Y P +
Sbjct: 121 -NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPP-----DVLF 174
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
Y+ I D++S G + E+ P
Sbjct: 175 GAKLYSTSI----DMWSAGCIFAELANAARP 201
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 99/222 (44%), Gaps = 21/222 (9%)
Query: 506 KDFDAKYCIGKGEHRSVYRA--KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
++F IG+G + VY+A KL +G+ +A+KK + + + EI L ++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTA--IREISLLKEL 59
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALS 623
H NIVK ++V+E++++ + ++ K + + + L+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIK--SYLFQLLQGLA 117
Query: 624 YMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAH 683
+ H ++HRD+ N+L++ E +++DFG A+ + V T Y AP
Sbjct: 118 FCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE- 173
Query: 684 GNIGLHLAELAYTMKITEKCDVYSFGVLALEVI--KGKHPGD 723
+ L Y+ + D++S G + E++ + PGD
Sbjct: 174 ----ILLGCKYYSTAV----DIWSLGCIFAEMVTRRALFPGD 207
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 80/196 (40%), Gaps = 32/196 (16%)
Query: 546 QMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVR----HSFVVYEYINRGSLATVLSN-- 599
+ D++E E H NI++ +C R ++++ + RG+L +
Sbjct: 66 EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLK 125
Query: 600 ---NFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDF 656
NF +ED + + ++ G+ L +H + HRD+ N+LL E + + D
Sbjct: 126 DKGNFLTED----QILWLLLGICRGLEAIHAKGY---AHRDLKPTNILLGDEGQPVLMDL 178
Query: 657 GT---AKLLKPNS------SNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYS 707
G+ A + S +W T Y AP ++ H I E+ DV+S
Sbjct: 179 GSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCV-------IDERTDVWS 231
Query: 708 FGVLALEVIKGKHPGD 723
G + ++ G+ P D
Sbjct: 232 LGCVLYAMMFGEGPYD 247
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 76/176 (43%), Gaps = 30/176 (17%)
Query: 555 NEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV 614
EI+ L K+ H I+K F ++V E + G L + N KR+
Sbjct: 189 TEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGN---------KRLKE 238
Query: 615 IT------GVADALSYMHHDCFPPIVHRDISSNNVLLDLEYE---ARVSDFGTAKLLKPN 665
T + A+ Y+H + I+HRD+ NVLL + E +++DFG +K+L
Sbjct: 239 ATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 295
Query: 666 SSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
S T L GT Y+AP + + + Y + D +S GV+ + G P
Sbjct: 296 SLMRT-LCGTPTYLAP---EVLVSVGTAGYNRAV----DCWSLGVILFICLSGYPP 343
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 116/289 (40%), Gaps = 35/289 (12%)
Query: 504 RTKDFDAKYCIGKGEHRSVYRAK-LPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIK-ALT 561
+ D + +G+G + V + + +PSG +AVK+ + N Q +QK L ++ ++
Sbjct: 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATV-NSQ--EQKRLLMDLDISMR 61
Query: 562 KIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRM------NVI 615
+ V FYG ++ E ++ + F + D + + +
Sbjct: 62 TVDCPFTVTFYGALFREGDVWICMELMDTSL------DKFYKQVIDKGQTIPEDILGKIA 115
Query: 616 TGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGT 675
+ AL ++H ++HRD+ +NVL++ + ++ DFG + L + + + G
Sbjct: 116 VSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID-AGC 172
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXI 735
Y+AP I L + Y++ K D++S G+ +E+ + P D +
Sbjct: 173 KPYMAPER--INPELNQKGYSV----KSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 226
Query: 736 NIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
E P P L + ++ CL RPT + Q
Sbjct: 227 VEE---------PSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 92/240 (38%), Gaps = 53/240 (22%)
Query: 507 DFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHR 566
DF IG G V++AK K V + + N++ E+KAL K+ H
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIR-RVKYNNEKAE------REVKALAKLDHV 65
Query: 567 NIVKFYGFC------------------------------SHVRHSFVVYEYINRGSLATV 596
NIV + G C S + F+ E+ ++G+L
Sbjct: 66 NIVHYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQW 124
Query: 597 LSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDF 656
+ E D + + + + Y+H ++HRD+ +N+ L + ++ DF
Sbjct: 125 IEKR-RGEKLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDF 180
Query: 657 GTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI 716
G LK N T GT Y++P E + ++ D+Y+ G++ E++
Sbjct: 181 GLVTSLK-NDGKRTRSKGTLRYMSP----------EQISSQDYGKEVDLYALGLILAELL 229
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 90/225 (40%), Gaps = 26/225 (11%)
Query: 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKI----AVKKFNSPFPNDQMSDQKEFLNEIKALT 561
++F+ +G G + V+ + SG A+K + + E + L
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 562 KIRHRN--IVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVA 619
IR + Y F + + ++ +YIN G L T LS E F + + +
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLIL-DYINGGELFTHLSQR---ERFTEHEVQIYVGEIV 169
Query: 620 DALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAK-LLKPNSSNWTELVGTFGY 678
AL ++H I++RDI N+LLD ++DFG +K + + + GT Y
Sbjct: 170 LALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEY 226
Query: 679 VAP--AHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+AP G H + D +S GVL E++ G P
Sbjct: 227 MAPDIVRGGDSGH----------DKAVDWWSLGVLMYELLTGASP 261
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 98/222 (44%), Gaps = 21/222 (9%)
Query: 506 KDFDAKYCIGKGEHRSVYRA--KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
++F IG+G + VY+A KL +G+ +A+KK + + + EI L ++
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTA--IREISLLKEL 62
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALS 623
H NIVK ++V+E+++ + ++ K + + + L+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIK--SYLFQLLQGLA 120
Query: 624 YMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAH 683
+ H ++HRD+ N+L++ E +++DFG A+ + V T Y AP
Sbjct: 121 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE- 176
Query: 684 GNIGLHLAELAYTMKITEKCDVYSFGVLALEVI--KGKHPGD 723
+ L Y+ + D++S G + E++ + PGD
Sbjct: 177 ----ILLGCKYYSTAV----DIWSLGCIFAEMVTRRALFPGD 210
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 142/340 (41%), Gaps = 40/340 (11%)
Query: 46 VRNLSKLKYLDLSENELSGKIPPEIGXXXXXXXXXXXXNQFSGTFPPICNLSNLKYISLH 105
V L+ L ++ S N+L+ P + NQ + P+ NL+NL ++L
Sbjct: 59 VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIAD-ITPLANLTNLTGLTLF 115
Query: 106 NNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGL--LEILTVNDNHFLGSIPN 163
NN+++ P + NL L+ L L +N + SGL L+ L + N P
Sbjct: 116 NNQITDIDP--LKNLTNLNRLELSSNTISDI----SALSGLTSLQQLNFSSNQVTDLKP- 168
Query: 164 LRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLD--LSHNNFYGEISSNWGKCHRLGTL 221
L N +L R + N ++ D + L L+ ++ NN +I+ G L L
Sbjct: 169 LANLTTLERLDISSNKVS-----DISVLAKLTNLESLIATNNQISDITP-LGILTNLDEL 222
Query: 222 IVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLP 281
++GN + + + + + L LDL++N I+ P L L L +L L NQ+S P
Sbjct: 223 SLNGNQL--KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP 278
Query: 282 RALGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQEIPXXXXXXXXXXXX 341
L LT L +L+ N+L + + + + L YL N S P
Sbjct: 279 --LAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDISPVSSLTKLQR--- 331
Query: 342 XXXXNLF----KGSIPSRICNLESLEKLNLSHNNISGQIP 377
LF K S S + NL ++ L+ HN IS P
Sbjct: 332 -----LFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTP 366
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 18/119 (15%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
I++RD+ +NV+LD E +++DFG K + GT Y+AP E
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAP----------E 191
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAMLDHRLPHPS 751
+ + D ++FGVL E++ G+ P + F ++++H + +P
Sbjct: 192 IIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL--------FQSIMEHNVAYPK 242
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 95/240 (39%), Gaps = 34/240 (14%)
Query: 553 FLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRM 612
F ++K+ H+++V YG C + +V E++ GSL T L N + W ++
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KL 116
Query: 613 NVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTE- 671
V +A A+ ++ + ++H ++ + N+LL E + + + KL P S
Sbjct: 117 EVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP 173
Query: 672 ---LVGTFGYVAPA--HGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXX 726
L +V P L+LA D +SFG E+ G GD
Sbjct: 174 KDILQERIPWVPPECIENPKNLNLA-----------TDKWSFGTTLWEICSG---GDKPL 219
Query: 727 XXXXXXXXINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
+ + H+LP P LI+ C+D P+ RP+ + + + L
Sbjct: 220 SALDSQRKLQFYEDR---HQLPAPKAAELANLINN------CMDYEPDHRPSFRAIIRDL 270
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 76/176 (43%), Gaps = 30/176 (17%)
Query: 555 NEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNV 614
EI+ L K+ H I+K F ++V E + G L + N KR+
Sbjct: 203 TEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGN---------KRLKE 252
Query: 615 IT------GVADALSYMHHDCFPPIVHRDISSNNVLLDLEYE---ARVSDFGTAKLLKPN 665
T + A+ Y+H + I+HRD+ NVLL + E +++DFG +K+L
Sbjct: 253 ATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 309
Query: 666 SSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
S T L GT Y+AP + + + Y + D +S GV+ + G P
Sbjct: 310 SLMRT-LCGTPTYLAP---EVLVSVGTAGYNRAV----DCWSLGVILFICLSGYPP 357
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 18/119 (15%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
I++RD+ +NV+LD E +++DFG K + GT Y+AP E
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAP----------E 512
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXXXXXINIEFNAMLDHRLPHPS 751
+ + D ++FGVL E++ G+ P + F ++++H + +P
Sbjct: 513 IIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL--------FQSIMEHNVAYPK 563
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 98/222 (44%), Gaps = 21/222 (9%)
Query: 506 KDFDAKYCIGKGEHRSVYRA--KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563
++F IG+G + VY+A KL +G+ +A+KK + + + EI L ++
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKL-TGEVVALKKIRLDTETEGVPSTA--IREISLLKEL 61
Query: 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALS 623
H NIVK ++V+E+++ + ++ K + + + L+
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIK--SYLFQLLQGLA 119
Query: 624 YMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAH 683
+ H ++HRD+ N+L++ E +++DFG A+ + V T Y AP
Sbjct: 120 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE- 175
Query: 684 GNIGLHLAELAYTMKITEKCDVYSFGVLALEVI--KGKHPGD 723
+ L Y+ + D++S G + E++ + PGD
Sbjct: 176 ----ILLGCKYYSTAV----DIWSLGCIFAEMVTRRALFPGD 209
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 90/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 88 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ DF A + T V T Y AP I L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFYLA---RHTDDEMTGYVATRWYRAP---EIMLNW 197
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 198 ------MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 97/220 (44%), Gaps = 27/220 (12%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIR-HRNIVKF 571
+G+G + V A L +G + AVK + + E++ L + + ++NI++
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSR----SRVFREVETLYQCQGNKNILEL 76
Query: 572 YGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFP 631
F ++V+E + GS +L++ + F+ R+ V+ VA AL ++H
Sbjct: 77 IEFFEDDTRFYLVFEKLQGGS---ILAHIQKQKHFNEREASRVVRDVAAALDFLHTK--- 130
Query: 632 PIVHRDISSNNVLLDLEYEA---RVSDFGTAKLLKPNSS-------NWTELVGTFGYVAP 681
I HRD+ N+L + + ++ DF +K N+S T G+ Y+AP
Sbjct: 131 GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAP 190
Query: 682 AHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ A ++CD++S GV+ ++ G P
Sbjct: 191 EVVEVFTDQATF-----YDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 76/179 (42%), Gaps = 32/179 (17%)
Query: 550 QKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFA-SEDFDW 608
Q+E +N +RH NIV+F H ++ EY + G L + N SED
Sbjct: 64 QREIINH----RSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEAR 119
Query: 609 RKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEAR--VSDFGTAKL----L 662
+++GV SY H I HRD+ N LLD R + DFG +K
Sbjct: 120 FFFQQLLSGV----SYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS 172
Query: 663 KPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+P S+ VGT Y+AP L Y KI DV+S GV ++ G +P
Sbjct: 173 QPKST-----VGTPAYIAPE------VLLRQEYDGKIA---DVWSCGVTLYVMLVGAYP 217
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 90/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 88 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ FG A + T V T Y AP I L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILGFGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 197
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 198 ------MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 17/170 (10%)
Query: 511 KYCIGKGEHRSVYRAKLPSGDK-IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
K+ IG+G + VY A + +K +A+KK N F + + D K L EI L +++ I+
Sbjct: 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMF--EDLIDCKRILREITILNRLKSDYII 88
Query: 570 KFYGFCS-----HVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSY 624
+ Y ++V E + + F +E+ N++ G ++
Sbjct: 89 RLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGE----NF 144
Query: 625 MHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVG 674
+H I+HRD+ N LL+ + +V DFG A+ + NS T +V
Sbjct: 145 IHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTI--NSEKDTNIVN 189
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 142/338 (42%), Gaps = 37/338 (10%)
Query: 46 VRNLSKLKYLDLSENELSGKIPPEIGXXXXXXXXXXXXNQFSGTFPPICNLSNLKYISLH 105
V L+ L ++ S N+L+ P + NQ + P+ NL+NL ++L
Sbjct: 64 VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIAD-ITPLANLTNLTGLTLF 120
Query: 106 NNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLR 165
NN+++ P + NL L+ L L +N + SGL + ++ + + + L
Sbjct: 121 NNQITDIDP--LKNLTNLNRLELSSNTISDI----SALSGLTSLQQLSFGNQVTDLKPLA 174
Query: 166 NCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLD--LSHNNFYGEISSNWGKCHRLGTLIV 223
N +L R + N ++ D + L L+ ++ NN +I+ G L L +
Sbjct: 175 NLTTLERLDISSNKVS-----DISVLAKLTNLESLIATNNQISDITP-LGILTNLDELSL 228
Query: 224 SGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRA 283
+GN + + + + + L LDL++N I+ P L L L +L L NQ+S P
Sbjct: 229 NGNQL--KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP-- 282
Query: 284 LGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQEIPXXXXXXXXXXXXXX 343
L LT L +L+ N+L + + + + L YL N S P
Sbjct: 283 LAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDISPVSSLTKLQR----- 335
Query: 344 XXNLF----KGSIPSRICNLESLEKLNLSHNNISGQIP 377
LF K S S + NL ++ L+ HN IS P
Sbjct: 336 ---LFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTP 370
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 90/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 88 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ D G A + T V T Y AP I L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDAGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 197
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 198 ------MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 73/166 (43%), Gaps = 28/166 (16%)
Query: 563 IRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFA-SEDFDWRKRMNVITGVADA 621
+RH NIV+F H +V EY + G L + N SED +I+GV
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV--- 128
Query: 622 LSYMHHDCFPPIVHRDISSNNVLLDLEYEAR--VSDFGTAKL----LKPNSSNWTELVGT 675
SY H + HRD+ N LLD R ++DFG +K +P S+ VGT
Sbjct: 129 -SYAHA---MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSA-----VGT 179
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
Y+AP L + Y K+ DV+S GV ++ G +P
Sbjct: 180 PAYIAPE------VLLKKEYDGKV---ADVWSCGVTLYVMLVGAYP 216
>pdb|3VQ1|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ1|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ2|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
pdb|3VQ2|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
Length = 606
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 54/128 (42%), Gaps = 1/128 (0%)
Query: 185 SEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHV 244
S F + L++LDLS W H L LI++GN I P + L
Sbjct: 49 SYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLEN 108
Query: 245 LDLSSNHIAGEIPMELGRLISLNKLILRGNQL-SGHLPRALGLLTELEYFDLSSNRLNNS 303
L +A +G+LI+L KL + N + S LP LT L + DLS N +
Sbjct: 109 LVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTI 168
Query: 304 ILEALGFM 311
+ L F+
Sbjct: 169 TVNDLQFL 176
Score = 36.2 bits (82), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 356 ICNLESLEKLNLSHNNI-SGQIPACFIGMSGLLSIDISYNELRGPIPNSTVF-RNAPR 411
I L +L+KLN++HN I S ++PA F ++ L+ +D+SYN ++ N F R P+
Sbjct: 124 IGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQ 181
>pdb|2Z64|A Chain A, Crystal Structure Of Mouse Tlr4 And Mouse Md-2 Complex
Length = 599
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 54/128 (42%), Gaps = 1/128 (0%)
Query: 185 SEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHV 244
S F + L++LDLS W H L LI++GN I P + L
Sbjct: 44 SYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLEN 103
Query: 245 LDLSSNHIAGEIPMELGRLISLNKLILRGNQL-SGHLPRALGLLTELEYFDLSSNRLNNS 303
L +A +G+LI+L KL + N + S LP LT L + DLS N +
Sbjct: 104 LVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTI 163
Query: 304 ILEALGFM 311
+ L F+
Sbjct: 164 TVNDLQFL 171
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 10/71 (14%)
Query: 351 SIPSRICNLES--------LEKLNLSHNNI-SGQIPACFIGMSGLLSIDISYNELRGPIP 401
++ +++ +LES L+KLN++HN I S ++PA F ++ L+ +D+SYN ++
Sbjct: 106 AVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITV 165
Query: 402 NSTVF-RNAPR 411
N F R P+
Sbjct: 166 NDLQFLRENPQ 176
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 142/338 (42%), Gaps = 37/338 (10%)
Query: 46 VRNLSKLKYLDLSENELSGKIPPEIGXXXXXXXXXXXXNQFSGTFPPICNLSNLKYISLH 105
V L+ L ++ S N+L+ P + NQ + P+ NL+NL ++L
Sbjct: 63 VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIAD-ITPLANLTNLTGLTLF 119
Query: 106 NNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLR 165
NN+++ P + NL L+ L L +N + SGL + ++ + + + L
Sbjct: 120 NNQITDIDP--LKNLTNLNRLELSSNTISDI----SALSGLTSLQQLSFGNQVTDLKPLA 173
Query: 166 NCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLD--LSHNNFYGEISSNWGKCHRLGTLIV 223
N +L R + N ++ D + L L+ ++ NN +I+ G L L +
Sbjct: 174 NLTTLERLDISSNKVS-----DISVLAKLTNLESLIATNNQISDITP-LGILTNLDELSL 227
Query: 224 SGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRA 283
+GN + + + + + L LDL++N I+ P L L L +L L NQ+S P
Sbjct: 228 NGNQL--KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP-- 281
Query: 284 LGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQEIPXXXXXXXXXXXXXX 343
L LT L +L+ N+L + + + + L YL N S P
Sbjct: 282 LAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDISPVSSLTKLQR----- 334
Query: 344 XXNLF----KGSIPSRICNLESLEKLNLSHNNISGQIP 377
LF K S S + NL ++ L+ HN IS P
Sbjct: 335 ---LFFANNKVSDVSSLANLTNINWLSAGHNQISDLTP 369
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 90/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 88 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ D G A + T V T Y AP I L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDRGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 197
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 198 ------MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 95/240 (39%), Gaps = 34/240 (14%)
Query: 553 FLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRM 612
F ++K+ H+++V YG C + +V E++ GSL T L N + W ++
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KL 116
Query: 613 NVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTE- 671
V +A A+ ++ + ++H ++ + N+LL E + + + KL P S
Sbjct: 117 EVAKQLAWAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP 173
Query: 672 ---LVGTFGYVAPA--HGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXX 726
L +V P L+LA D +SFG E+ G GD
Sbjct: 174 KDILQERIPWVPPECIENPKNLNLA-----------TDKWSFGTTLWEICSG---GDKPL 219
Query: 727 XXXXXXXXINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
+ + H+LP P LI+ C+D P+ RP+ + + + L
Sbjct: 220 SALDSQRKLQFYEDR---HQLPAPKAAELANLINN------CMDYEPDHRPSFRAIIRDL 270
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 90/209 (43%), Gaps = 21/209 (10%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G G + SV A +G ++AVKK + PF + + K E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS--IIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 573 GFCSHVRHSFVVYE--YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF 630
+ R S + Y+ + L+N + +I + L Y+H
Sbjct: 88 DVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
I+HRD+ +N+ ++ + E ++ D G A + T V T Y AP I L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDGGLA---RHTDDEMTGYVATRWYRAP---EIMLNW 197
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGK 719
M + D++S G + E++ G+
Sbjct: 198 ------MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 83/192 (43%), Gaps = 28/192 (14%)
Query: 533 IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCS------HVRHSFVVYE 586
+A+KK + PF N + K E+ + + H+NI+ + + ++V E
Sbjct: 52 VAIKKLSRPFQNQ--THAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 587 YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLD 646
++ +L+ V+ E RM+ + + L + H I+HRD+ +N+++
Sbjct: 110 LMD-ANLSQVIQMELDHE------RMSYL--LYQMLCGIKHLHSAGIIHRDLKPSNIVVK 160
Query: 647 LEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVY 706
+ ++ DFG A+ S T V T Y AP E+ M E D++
Sbjct: 161 SDATLKILDFGLARTAG-TSFMMTPYVVTRYYRAP----------EVILGMGYKENVDIW 209
Query: 707 SFGVLALEVIKG 718
S G + E+IKG
Sbjct: 210 SVGCIMGEMIKG 221
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 83/195 (42%), Gaps = 28/195 (14%)
Query: 530 GDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCS------HVRHSFV 583
G +AVKK + PF N + K E+ L + H+NI+ + + ++
Sbjct: 47 GINVAVKKLSRPFQNQ--THAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYL 104
Query: 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNV 643
V E ++ +L V+ E RM+ + + L + H I+HRD+ +N+
Sbjct: 105 VMELMD-ANLCQVIHMELDHE------RMSYL--LYQMLCGIKHLHSAGIIHRDLKPSNI 155
Query: 644 LLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKC 703
++ + ++ DFG A+ N T V T Y AP E+ M E
Sbjct: 156 VVKSDCTLKILDFGLARTASTNFMM-TPYVVTRYYRAP----------EVILGMGYKENV 204
Query: 704 DVYSFGVLALEVIKG 718
D++S G + E++KG
Sbjct: 205 DIWSVGCIMGELVKG 219
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 83/192 (43%), Gaps = 28/192 (14%)
Query: 533 IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCS------HVRHSFVVYE 586
+A+KK + PF N + K E+ + + H+NI+ + + ++V E
Sbjct: 52 VAIKKLSRPFQNQ--THAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 587 YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLD 646
++ +L+ V+ E RM+ + + L + H I+HRD+ +N+++
Sbjct: 110 LMD-ANLSQVIQMELDHE------RMSYL--LYQMLVGIKHLHSAGIIHRDLKPSNIVVK 160
Query: 647 LEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVY 706
+ ++ DFG A+ S T V T Y AP E+ M E D++
Sbjct: 161 SDATLKILDFGLARTAG-TSFMMTPYVVTRYYRAP----------EVILGMGYKENVDIW 209
Query: 707 SFGVLALEVIKG 718
S G + E+IKG
Sbjct: 210 SVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 83/192 (43%), Gaps = 28/192 (14%)
Query: 533 IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCS------HVRHSFVVYE 586
+A+KK + PF N + K E+ + + H+NI+ + + ++V E
Sbjct: 52 VAIKKLSRPFQNQ--THAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 587 YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLD 646
++ +L+ V+ E RM+ + + L + H I+HRD+ +N+++
Sbjct: 110 LMD-ANLSQVIQMELDHE------RMSYL--LYQMLCGIKHLHSAGIIHRDLKPSNIVVK 160
Query: 647 LEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVY 706
+ ++ DFG A+ S T V T Y AP E+ M E D++
Sbjct: 161 SDATLKILDFGLARTAG-TSFMMTPYVVTRYYRAP----------EVILGMGYKENVDIW 209
Query: 707 SFGVLALEVIKG 718
S G + E+IKG
Sbjct: 210 SVGCIMGEMIKG 221
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K + WT L GT Y+AP E
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GATWT-LCGTPEYLAP----------E 229
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 230 IILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 94/226 (41%), Gaps = 21/226 (9%)
Query: 511 KYCIGKGEHRSVYRAK-LPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIR-HRNI 568
+ + +G VY A+ + SG + A+K+ S ++ + + E+ + K+ H NI
Sbjct: 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLS----NEEEKNRAIIQEVCFMKKLSGHPNI 88
Query: 569 VKFYGFCSHVRHS-------FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADA 621
V+F S + F++ + +G L L + + + A
Sbjct: 89 VQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRA 148
Query: 622 LSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK--PNSSNWTELVGTFGYV 679
+ +MH PPI+HRD+ N+LL + ++ DFG+A + P+ S W+
Sbjct: 149 VQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYS-WSAQRRALVEE 206
Query: 680 APAHGNIGLH----LAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
++ + +L I EK D+++ G + + +HP
Sbjct: 207 EITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHP 252
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 28/192 (14%)
Query: 533 IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCS------HVRHSFVVYE 586
+A+KK + PF N + K E+ + + H+NI+ + + ++V E
Sbjct: 53 VAIKKLSRPFQNQ--THAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 110
Query: 587 YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLD 646
++ +L V+ E RM+ + + L + H I+HRD+ +N+++
Sbjct: 111 LMD-ANLCQVIQMELDHE------RMSYL--LYQMLCGIKHLHSAGIIHRDLKPSNIVVK 161
Query: 647 LEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVY 706
+ ++ DFG A+ S T V T Y AP E+ M E D++
Sbjct: 162 SDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAP----------EVILGMGYKENVDIW 210
Query: 707 SFGVLALEVIKG 718
S G + E+IKG
Sbjct: 211 SVGCIMGEMIKG 222
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 83/192 (43%), Gaps = 28/192 (14%)
Query: 533 IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCS------HVRHSFVVYE 586
+A+KK + PF N + K E+ + + H+NI+ + + ++V E
Sbjct: 52 VAIKKLSRPFQNQ--THAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 587 YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLD 646
++ +L+ V+ E RM+ + + L + H I+HRD+ +N+++
Sbjct: 110 LMD-ANLSQVIQMELDHE------RMSYL--LYQMLCGIKHLHSAGIIHRDLKPSNIVVK 160
Query: 647 LEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVY 706
+ ++ DFG A+ S T V T Y AP E+ M E D++
Sbjct: 161 SDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAP----------EVILGMGYKENVDIW 209
Query: 707 SFGVLALEVIKG 718
S G + E+IKG
Sbjct: 210 SVGCIMGEMIKG 221
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 17/179 (9%)
Query: 490 LDFDGKIMYEEIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGDK-IAVKKFNSPFPNDQMS 548
L F G I+ ++ +++ K+ IG+G + VY A + +K +A+KK N F + +
Sbjct: 14 LYFQGAIIKN--VKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMF--EDLI 69
Query: 549 DQKEFLNEIKALTKIRHRNIVKFYGFCS-----HVRHSFVVYEYINRGSLATVLSNNFAS 603
D K L EI L +++ I++ + ++V E + + F +
Sbjct: 70 DCKRILREITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLT 129
Query: 604 EDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLL 662
E N++ G ++H I+HRD+ N LL+ + ++ DFG A+ +
Sbjct: 130 EQHVKTILYNLLLGE----KFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTI 181
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 28/192 (14%)
Query: 533 IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCS------HVRHSFVVYE 586
+A+KK + PF N + K E+ + + H+NI+ + + ++V E
Sbjct: 52 VAIKKLSRPFQNQ--THAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 587 YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLD 646
++ +L V+ E RM+ + + L + H I+HRD+ +N+++
Sbjct: 110 LMD-ANLCQVIQMELDHE------RMSYL--LYQMLCGIKHLHSAGIIHRDLKPSNIVVK 160
Query: 647 LEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVY 706
+ ++ DFG A+ S T V T Y AP E+ M E D++
Sbjct: 161 SDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAP----------EVILGMGYKENVDIW 209
Query: 707 SFGVLALEVIKG 718
S G + E+IKG
Sbjct: 210 SVGCIMGEMIKG 221
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 72/166 (43%), Gaps = 28/166 (16%)
Query: 563 IRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFA-SEDFDWRKRMNVITGVADA 621
+RH NIV+F H +V EY + G L + N SED +I+GV
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV--- 128
Query: 622 LSYMHHDCFPPIVHRDISSNNVLLDLEYEAR--VSDFGTAKL----LKPNSSNWTELVGT 675
SY H + HRD+ N LLD R + DFG +K +P S+ VGT
Sbjct: 129 -SYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-----VGT 179
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
Y+AP L + Y K+ DV+S GV ++ G +P
Sbjct: 180 PAYIAPE------VLLKKEYDGKVA---DVWSCGVTLYVMLVGAYP 216
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 514 IGKGEHRSVYRAK-LPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
IG+G + +V++AK + + +A+K+ +D L EI L +++H+NIV+ +
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVR--LDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 573 GFCSHVRHSFVVYEYINRGSLATVLSNNFAS--EDFDWRKRMNVITGVADALSYMHHDCF 630
+ +V+E+ ++ L F S D D + + + L + H
Sbjct: 68 DVLHSDKKLTLVFEFCDQD-----LKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR-- 120
Query: 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL 690
++HRD+ N+L++ E ++++FG A+ ++ V T Y P +
Sbjct: 121 -NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPP-----DVLF 174
Query: 691 AELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
Y+ I D++S G + E+ P
Sbjct: 175 GAKLYSTSI----DMWSAGCIFAELANAGRP 201
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 72/166 (43%), Gaps = 28/166 (16%)
Query: 563 IRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSN-NFASEDFDWRKRMNVITGVADA 621
+RH NIV+F H +V EY + G L + N SED +I+GV
Sbjct: 71 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV--- 127
Query: 622 LSYMHHDCFPPIVHRDISSNNVLLDLEYEAR--VSDFGTAKL----LKPNSSNWTELVGT 675
SY H + HRD+ N LLD R + DFG +K +P S+ VGT
Sbjct: 128 -SYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-----VGT 178
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
Y+AP L + Y K+ DV+S GV ++ G +P
Sbjct: 179 PAYIAPE------VLLKKEYDGKVA---DVWSCGVTLYVMLVGAYP 215
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 28/192 (14%)
Query: 533 IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCS------HVRHSFVVYE 586
+A+KK + PF N + K E+ + + H+NI+ + + ++V E
Sbjct: 52 VAIKKLSRPFQNQ--THAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 587 YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLD 646
++ +L V+ E RM+ + + L + H I+HRD+ +N+++
Sbjct: 110 LMD-ANLCQVIQMELDHE------RMSYL--LYQMLCGIKHLHSAGIIHRDLKPSNIVVK 160
Query: 647 LEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVY 706
+ ++ DFG A+ S T V T Y AP E+ M E D++
Sbjct: 161 SDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAP----------EVILGMGYKENVDIW 209
Query: 707 SFGVLALEVIKG 718
S G + E+IKG
Sbjct: 210 SVGCIMGEMIKG 221
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 83/192 (43%), Gaps = 28/192 (14%)
Query: 533 IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCS------HVRHSFVVYE 586
+A+KK + PF N + K E+ + + H+NI+ + + ++V E
Sbjct: 52 VAIKKLSRPFQNQ--THAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 587 YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLD 646
++ +L V+ E RM+ + + L + H I+HRD+ +N+++
Sbjct: 110 LMD-ANLCQVIQMELDHE------RMSYL--LYQMLCGIKHLHSAGIIHRDLKPSNIVVK 160
Query: 647 LEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVY 706
+ ++ DFG A+ + E+V + Y AP E+ M E D++
Sbjct: 161 SDCTLKILDFGLARTAGTSFMMTPEVVTRY-YRAP----------EVILGMGYKENVDIW 209
Query: 707 SFGVLALEVIKG 718
S G + E+IKG
Sbjct: 210 SVGCIMGEMIKG 221
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K WT L GT Y+AP E
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWT-LCGTPEYLAP----------E 209
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K WT L GT Y+AP E
Sbjct: 148 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWT-LCGTPEYLAP----------E 194
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 195 IILSKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 81/192 (42%), Gaps = 28/192 (14%)
Query: 533 IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCS------HVRHSFVVYE 586
+A+KK + PF N + K E+ + + H+NI+ + + ++V E
Sbjct: 54 VAIKKLSRPFQNQ--THAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 111
Query: 587 YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLD 646
++ +L V+ E RM+ + + L + H I+HRD+ +N+++
Sbjct: 112 LMD-ANLCQVIQMELDHE------RMSYL--LYQMLCGIKHLHSAGIIHRDLKPSNIVVK 162
Query: 647 LEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVY 706
+ ++ DFG A+ S V T Y AP E+ M E D++
Sbjct: 163 SDCTLKILDFGLARTAG-TSFMMVPFVVTRYYRAP----------EVILGMGYKENVDIW 211
Query: 707 SFGVLALEVIKG 718
S G + E+IKG
Sbjct: 212 SVGCIMGEMIKG 223
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 112/293 (38%), Gaps = 43/293 (14%)
Query: 504 RTKDFDAKYCIGKGEHRSVYRAK-LPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTK 562
+ D + +G+G + V + + +PSG AVK+ + N Q +QK L ++
Sbjct: 32 KADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATV-NSQ--EQKRLLXDLD---- 84
Query: 563 IRHRNI-----VKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRM----- 612
I R + V FYG ++ E L + F + D + +
Sbjct: 85 ISXRTVDCPFTVTFYGALFREGDVWICXE------LXDTSLDKFYKQVIDKGQTIPEDIL 138
Query: 613 -NVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTE 671
+ + AL ++H ++HRD+ +NVL++ + + DFG + L + + +
Sbjct: 139 GKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID 196
Query: 672 LVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDXXXXXXXX 731
G Y AP I L + Y++ K D++S G+ +E+ + P D
Sbjct: 197 -AGCKPYXAPER--INPELNQKGYSV----KSDIWSLGITXIELAILRFPYDSWGTPFQQ 249
Query: 732 XXXINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784
+ E P P L + ++ CL RPT + Q
Sbjct: 250 LKQVVEE---------PSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQ 293
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/189 (19%), Positives = 82/189 (43%), Gaps = 7/189 (3%)
Query: 531 DKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINR 590
D+I +K ++ +P S +I+ + +N V S + ++ + +
Sbjct: 86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRK 145
Query: 591 GSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYE 650
+L ++ + ED + +++ +A+A+ ++H ++HRD+ +N+ ++
Sbjct: 146 ENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDV 202
Query: 651 ARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHL---AELAYTMKITEKCDVYS 707
+V DFG + + T L Y A G +G L E + + K D++S
Sbjct: 203 VKVGDFGLVTAMDQDEEEQTVLTPMPAY-ATHXGQVGTKLYMSPEQIHGNNYSHKVDIFS 261
Query: 708 FGVLALEVI 716
G++ E++
Sbjct: 262 LGLILFELL 270
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 503 RRTKDFDAKYCIGKGEHRSVYRAKLPSGD-KIAVKKFNSPFPNDQMSDQKEFLNEIKALT 561
R DF+ C+G+G V+ AK D A+K+ PN +++ +K + E+KAL
Sbjct: 3 RYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIR--LPNRELAREK-VMREVKALA 59
Query: 562 KIRHRNIVKFY 572
K+ H IV+++
Sbjct: 60 KLEHPGIVRYF 70
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 103/232 (44%), Gaps = 34/232 (14%)
Query: 501 IIRRTKDFDAKYCIGKGEHRSVYRAK-LPSGDK-IAVKKFNSPFPNDQMSDQKEFLNEIK 558
+ R + ++ IG+G + V++A+ L +G + +A+K+ Q ++ L+ I+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRV-----QTGEEGMPLSTIR 60
Query: 559 ALTKIRH------RNIVKFYGFCSHVRHS-----FVVYEYINRGSLATVLSNNFASEDFD 607
+ +RH N+V+ + C+ R +V+E++++ L T L +
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL-DKVPEPGVP 118
Query: 608 WRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSS 667
+++ + L ++H +VHRD+ N+L+ + +++DFG A++ +
Sbjct: 119 TETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA 175
Query: 668 NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGK 719
T +V T Y AP E+ D++S G + E+ + K
Sbjct: 176 -LTSVVVTLWYRAP----------EVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 68/163 (41%), Gaps = 30/163 (18%)
Query: 575 CSHVRHSFVVYE--YINRGSLATVLS-----------NNFASEDFDWRKRMNVITGVADA 621
C H+ VYE Y R L V+ + + F R+ ++ + +A
Sbjct: 68 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 127
Query: 622 LSYMHHDCFPPIVHRDISSNNVLLDLEYE---ARVSDFGTAKLLKPNSSNWTELVGTFGY 678
+ Y+H I HRD+ N+L + +++DFG AK ++S TE T Y
Sbjct: 128 IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTEPCYTPYY 183
Query: 679 VAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
VAP E+ K + CD++S GV+ ++ G P
Sbjct: 184 VAP----------EVLGPEKYDKSCDMWSLGVIMYILLCGYPP 216
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 29/213 (13%)
Query: 514 IGKGEHRSVYRAKLPSGDK-IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
IG G V A D+ +A+KK + PF N + K E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ--THAKRAYRELVLMKXVNHKNIISLL 89
Query: 573 GFCS------HVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
+ + ++V E ++ +L V+ E RM+ + + L +
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHE------RMSYL--LYQMLCGIK 140
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNI 686
H I+HRD+ +N+++ + ++ DFG A+ S T V T Y AP
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAP----- 194
Query: 687 GLHLAELAYTMKITEKCDVYSFGVLALEVIKGK 719
E+ M E D++S G + E+++ K
Sbjct: 195 -----EVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 86/185 (46%), Gaps = 36/185 (19%)
Query: 550 QKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVL-----SNNFASE 604
++EF +E +++H N+V G + + +++ Y + G L L ++ S
Sbjct: 73 REEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGST 132
Query: 605 DFDWRKR--------MNVITGVADALSYM--HHDCFPPIVHRDISSNNVLLDLEYEARVS 654
D D + ++++ +A + Y+ HH +VH+D+++ NVL+ + ++S
Sbjct: 133 DDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKIS 187
Query: 655 DFGTAKLLKPNSSNWTELVGT----FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGV 710
D G + + ++++ +L+G ++AP G K + D++S+GV
Sbjct: 188 DLGLFREV--YAADYYKLLGNSLLPIRWMAPEAIMYG----------KFSIDSDIWSYGV 235
Query: 711 LALEV 715
+ EV
Sbjct: 236 VLWEV 240
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 23/170 (13%)
Query: 554 LNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSN--NFASEDFDWRKR 611
LNE + L + +VK + ++V EY+ G + + L FA +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAA 148
Query: 612 MNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTE 671
V+T Y+H +++RD+ N+L+D + +V+DFG AK +K W
Sbjct: 149 QIVLT-----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX- 197
Query: 672 LVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
L GT Y+AP E+ + + D ++ GVL E+ G P
Sbjct: 198 LCGTPEYLAP----------EIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 31/160 (19%)
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLL--KPNSSNWTELVGTFGYVAPAHGNIGLHLA 691
+HRD+++ N+LL + ++ DFG A+ + P+ + ++AP
Sbjct: 215 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP---------- 264
Query: 692 ELAYTMKITEKCDVYSFGVLALEVI---KGKHPGDXXXXXXXXXXXINIEFNAMLDH--R 746
E + T + DV+SFGVL E+ +PG I+ EF L R
Sbjct: 265 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG----------VKIDEEFCRRLKEGTR 314
Query: 747 LPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
+ P E + + L C G P+ RPT + + L
Sbjct: 315 MRAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHL 350
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 31/160 (19%)
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLL--KPNSSNWTELVGTFGYVAPAHGNIGLHLA 691
+HRD+++ N+LL + ++ DFG A+ + P+ + ++AP
Sbjct: 220 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP---------- 269
Query: 692 ELAYTMKITEKCDVYSFGVLALEVI---KGKHPGDXXXXXXXXXXXINIEFNAMLDH--R 746
E + T + DV+SFGVL E+ +PG I+ EF L R
Sbjct: 270 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG----------VKIDEEFCRRLKEGTR 319
Query: 747 LPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
+ P E + + L C G P+ RPT + + L
Sbjct: 320 MRAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHL 355
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 31/160 (19%)
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLL--KPNSSNWTELVGTFGYVAPAHGNIGLHLA 691
+HRD+++ N+LL + ++ DFG A+ + P+ + ++AP
Sbjct: 213 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP---------- 262
Query: 692 ELAYTMKITEKCDVYSFGVLALEVI---KGKHPGDXXXXXXXXXXXINIEFNAMLDH--R 746
E + T + DV+SFGVL E+ +PG I+ EF L R
Sbjct: 263 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG----------VKIDEEFCRRLKEGTR 312
Query: 747 LPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
+ P E + + L C G P+ RPT + + L
Sbjct: 313 MRAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 22/179 (12%)
Query: 554 LNEIKALTKIR-HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRM 612
E++ L + + HRN+++ F ++V+E + GS +LS+ F+ +
Sbjct: 58 FREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS---ILSHIHKRRHFNELEAS 114
Query: 613 NVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYE---ARVSDFGTAKLLKPNSS-- 667
V+ VA AL ++H+ I HRD+ N+L + + ++ DFG +K N
Sbjct: 115 VVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCS 171
Query: 668 --NWTELV---GTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ EL+ G+ Y+AP + +E A ++CD++S GV+ ++ G P
Sbjct: 172 PISTPELLTPCGSAEYMAP---EVVEAFSEEASIYD--KRCDLWSLGVILYILLSGYPP 225
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 31/160 (19%)
Query: 634 VHRDISSNNVLLDLEYEARVSDFGTAKLL--KPNSSNWTELVGTFGYVAPAHGNIGLHLA 691
+HRD+++ N+LL + ++ DFG A+ + P+ + ++AP
Sbjct: 222 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP---------- 271
Query: 692 ELAYTMKITEKCDVYSFGVLALEVI---KGKHPGDXXXXXXXXXXXINIEFNAMLDH--R 746
E + T + DV+SFGVL E+ +PG I+ EF L R
Sbjct: 272 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG----------VKIDEEFCRRLKEGTR 321
Query: 747 LPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786
+ P E + + L C G P+ RPT + + L
Sbjct: 322 MRAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHL 357
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLAP----------E 208
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 163 LIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLAP----------E 209
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLAP----------E 208
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLAP----------E 208
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 87/207 (42%), Gaps = 19/207 (9%)
Query: 514 IGKGEHRSVYRAKLPSGDK-IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G+G + +VY+ K D +A+K+ + E+ L ++H NIV +
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTA---IREVSLLKDLKHANIVTLH 66
Query: 573 GFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPP 632
+ +V+EY+++ L L + + + + L+Y H
Sbjct: 67 DIIHTEKSLTLVFEYLDK-DLKQYLDD--CGNIINMHNVKLFLFQLLRGLAYCHRQ---K 120
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
++HRD+ N+L++ E +++DFG A+ + + V T Y P + L
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPP-----DILLGS 175
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGK 719
Y+ +I D++ G + E+ G+
Sbjct: 176 TDYSTQI----DMWGVGCIFYEMATGR 198
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 82/193 (42%), Gaps = 28/193 (14%)
Query: 533 IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCS------HVRHSFVVYE 586
+A+KK + PF N + K E+ + + H+NI+ + + ++V E
Sbjct: 52 VAIKKLSRPFQNQ--THAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME 109
Query: 587 YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLD 646
++ +L V+ E + ++ + + ++H I+HRD+ +N+++
Sbjct: 110 LMD-ANLXQVIQMELDHERMSY-----LLYQMLXGIKHLHSAG---IIHRDLKPSNIVVK 160
Query: 647 LEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVY 706
+ ++ DFG A+ S T V T Y AP E+ M E D++
Sbjct: 161 SDXTLKILDFGLARTAG-TSFMMTPYVVTRYYRAP----------EVILGMGYKENVDIW 209
Query: 707 SFGVLALEVIKGK 719
S G + E+++ K
Sbjct: 210 SVGCIMGEMVRHK 222
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 29/213 (13%)
Query: 514 IGKGEHRSVYRAKLPSGDK-IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
IG G V A D+ +A+KK + PF N + K E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ--THAKRAYRELVLMKXVNHKNIISLL 89
Query: 573 GFCS------HVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
+ + ++V E ++ +L V+ E RM+ + + L +
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQMELDHE------RMSYL--LYQMLCGIK 140
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNI 686
H I+HRD+ +N+++ + ++ DFG A+ S T V T Y AP
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG-TSFMMTPYVVTRYYRAP----- 194
Query: 687 GLHLAELAYTMKITEKCDVYSFGVLALEVIKGK 719
E+ M E D++S G + E+++ K
Sbjct: 195 -----EVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LAGTPEYLAP----------E 208
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 61/127 (48%), Gaps = 19/127 (14%)
Query: 603 SEDFDWRKRM--NVITGVADALSYMHHDCFPPIVHRDISSNNVLL--DLEYEARVSDFGT 658
S DF R+++ N++ + AL Y+H+ I HRDI N L + +E ++ DFG
Sbjct: 160 SLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGL 216
Query: 659 AK-LLKPNSSNW---TELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALE 714
+K K N+ + T GT +VAP L+ +Y KCD +S GVL
Sbjct: 217 SKEFYKLNNGEYYGMTTKAGTPYFVAPE----VLNTTNESYG----PKCDAWSAGVLLHL 268
Query: 715 VIKGKHP 721
++ G P
Sbjct: 269 LLMGAVP 275
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 89/223 (39%), Gaps = 22/223 (9%)
Query: 504 RTKDFDAKYCIGKGEHRSVYRAKLPSGDK----IAVKKFNSPFPNDQMSDQKEFLNEIKA 559
R + F+ +GKG + V++ + +G A+K D E
Sbjct: 15 RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNI 74
Query: 560 LTKIRHRNIVKF-YGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGV 618
L +++H IV Y F + + +++ EY++ G L L F + +
Sbjct: 75 LEEVKHPFIVDLIYAFQTGGK-LYLILEYLSGGELFMQLEREGI---FMEDTACFYLAEI 130
Query: 619 ADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGY 678
+ AL ++H I++RD+ N++L+ + +++DFG K + + GT Y
Sbjct: 131 SMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEY 187
Query: 679 VAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+AP E+ D +S G L +++ G P
Sbjct: 188 MAP----------EILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 86/185 (46%), Gaps = 36/185 (19%)
Query: 550 QKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVL-----SNNFASE 604
++EF +E +++H N+V G + + +++ Y + G L L ++ S
Sbjct: 56 REEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGST 115
Query: 605 DFDWRKR--------MNVITGVADALSYM--HHDCFPPIVHRDISSNNVLLDLEYEARVS 654
D D + ++++ +A + Y+ HH +VH+D+++ NVL+ + ++S
Sbjct: 116 DDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKIS 170
Query: 655 DFGTAKLLKPNSSNWTELVGT----FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGV 710
D G + + ++++ +L+G ++AP G K + D++S+GV
Sbjct: 171 DLGLFREV--YAADYYKLLGNSLLPIRWMAPEAIMYG----------KFSIDSDIWSYGV 218
Query: 711 LALEV 715
+ EV
Sbjct: 219 VLWEV 223
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 89/223 (39%), Gaps = 22/223 (9%)
Query: 504 RTKDFDAKYCIGKGEHRSVYRAKLPSGDK----IAVKKFNSPFPNDQMSDQKEFLNEIKA 559
R + F+ +GKG + V++ + +G A+K D E
Sbjct: 15 RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNI 74
Query: 560 LTKIRHRNIVKF-YGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGV 618
L +++H IV Y F + + +++ EY++ G L L F + +
Sbjct: 75 LEEVKHPFIVDLIYAFQTGGK-LYLILEYLSGGELFMQLEREGI---FMEDTACFYLAEI 130
Query: 619 ADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGY 678
+ AL ++H I++RD+ N++L+ + +++DFG K + + GT Y
Sbjct: 131 SMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEY 187
Query: 679 VAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+AP E+ D +S G L +++ G P
Sbjct: 188 MAP----------EILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 103/232 (44%), Gaps = 34/232 (14%)
Query: 501 IIRRTKDFDAKYCIGKGEHRSVYRAK-LPSGDK-IAVKKFNSPFPNDQMSDQKEFLNEIK 558
+ R + ++ IG+G + V++A+ L +G + +A+K+ Q ++ L+ I+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRV-----QTGEEGMPLSTIR 60
Query: 559 ALTKIRH------RNIVKFYGFCSHVRHS-----FVVYEYINRGSLATVLSNNFASEDFD 607
+ +RH N+V+ + C+ R +V+E++++ L T L +
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL-DKVPEPGVP 118
Query: 608 WRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSS 667
+++ + L ++H +VHRD+ N+L+ + +++DFG A++ +
Sbjct: 119 TETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA 175
Query: 668 NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGK 719
T +V T Y AP E+ D++S G + E+ + K
Sbjct: 176 -LTSVVVTLWYRAP----------EVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 103/232 (44%), Gaps = 34/232 (14%)
Query: 501 IIRRTKDFDAKYCIGKGEHRSVYRAK-LPSGDK-IAVKKFNSPFPNDQMSDQKEFLNEIK 558
+ R + ++ IG+G + V++A+ L +G + +A+K+ Q ++ L+ I+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRV-----QTGEEGMPLSTIR 60
Query: 559 ALTKIRH------RNIVKFYGFCSHVRHS-----FVVYEYINRGSLATVLSNNFASEDFD 607
+ +RH N+V+ + C+ R +V+E++++ L T L +
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL-DKVPEPGVP 118
Query: 608 WRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSS 667
+++ + L ++H +VHRD+ N+L+ + +++DFG A++ +
Sbjct: 119 TETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA 175
Query: 668 NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGK 719
T +V T Y AP E+ D++S G + E+ + K
Sbjct: 176 -LTSVVVTLWYRAP----------EVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 82/195 (42%), Gaps = 28/195 (14%)
Query: 530 GDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCS------HVRHSFV 583
G +AVKK + PF N + K E+ L + H+NI+ + + ++
Sbjct: 49 GINVAVKKLSRPFQNQ--THAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYL 106
Query: 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNV 643
V E ++ +L V+ E RM+ + + L + H I+HRD+ +N+
Sbjct: 107 VMELMD-ANLCQVIHMELDHE------RMSYL--LYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 644 LLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKC 703
++ + ++ DFG A+ N T V T Y AP E+ M
Sbjct: 158 VVKSDCTLKILDFGLARTACTNFMM-TPYVVTRYYRAP----------EVILGMGYAANV 206
Query: 704 DVYSFGVLALEVIKG 718
D++S G + E++KG
Sbjct: 207 DIWSVGCIMGELVKG 221
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 229
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 230 IILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 208
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 208
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 208
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 209
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 209
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 209
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 229
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 230 IILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 201
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 202 IILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 208
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 208
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 208
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 209
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 209
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+++D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGLAKRVK--GRTWX-LCGTPEYLAP----------E 208
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 208
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 201
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 202 IILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 208
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 208
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 70/162 (43%), Gaps = 20/162 (12%)
Query: 563 IRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSN-NFASEDFDWRKRMNVITGVADA 621
+RH NIV+F H +V EY + G L + N SED +I+GV
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV--- 128
Query: 622 LSYMHHDCFPPIVHRDISSNNVLLDLEYEAR--VSDFGTAKLLKPNSSNWTELVGTFGYV 679
SY H + HRD+ N LLD R + FG +K +S + VGT Y+
Sbjct: 129 -SYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQP-KDTVGTPAYI 183
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
AP L + Y K+ DV+S GV ++ G +P
Sbjct: 184 APE------VLLKKEYDGKVA---DVWSCGVTLYVMLVGAYP 216
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 209
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 208
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 208
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 208
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LXGTPEYLAP----------E 208
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 225 GNNITGRIPPEIGNS-SQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRA 283
G+N G +P + +S +QL VLDL +N + RL+ L +L + N+L+ LPR
Sbjct: 72 GSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRG 130
Query: 284 LGLLTELEYFDLSSNRLNN 302
+ LT L + L N+L +
Sbjct: 131 IERLTHLTHLALDQNQLKS 149
Score = 33.9 bits (76), Expect = 0.40, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 214 KCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRG 273
+C GT + + +P I ++Q +L L N I P LI+L +L L
Sbjct: 16 QCSCSGTTVDCRSKRHASVPAGIPTNAQ--ILYLHDNQITKLEPGVFDSLINLKELYLGS 73
Query: 274 NQLSGHLPRAL-GLLTELEYFDLSSNRLN---NSILEALGFMFKLF 315
NQL G LP + LT+L DL +N+L +++ + L + +LF
Sbjct: 74 NQL-GALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELF 118
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 208
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 208
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 208
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+++D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 209
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 157 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 203
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 204 IILSKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+++D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 209
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+++D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 209
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 208
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 30/163 (18%)
Query: 575 CSHVRHSFVVYE--YINRGSLATVLS-----------NNFASEDFDWRKRMNVITGVADA 621
C H+ VYE Y R L V+ + + F R+ ++ + +A
Sbjct: 84 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 143
Query: 622 LSYMHHDCFPPIVHRDISSNNVLLDLEYE---ARVSDFGTAKLLKPNSSNWTELVGTFGY 678
+ Y+H I HRD+ N+L + +++DFG AK ++S T + Y
Sbjct: 144 IQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-Y 199
Query: 679 VAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
VAP E+ K + CD++S GV+ ++ G P
Sbjct: 200 VAP----------EVLGPEKYDKSCDMWSLGVIMYILLCGYPP 232
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 208
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+++D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 208
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+++D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 208
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K W L GT Y+APA
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPA---------- 208
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+++D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 209
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 89/213 (41%), Gaps = 29/213 (13%)
Query: 514 IGKGEHRSVYRAKLPSGDK-IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
IG G V A D+ +A+KK + PF N + K E+ + + H+NI+
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ--THAKRAYRELVLMKCVNHKNIISLL 82
Query: 573 GFCS------HVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
+ + ++V E ++ +L V+ E + ++ + + ++H
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQMELDHERMSY-----LLYQMLXGIKHLH 136
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNI 686
I+HRD+ +N+++ + ++ DFG A+ S T V T Y AP
Sbjct: 137 SAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAG-TSFMMTPYVVTRYYRAP----- 187
Query: 687 GLHLAELAYTMKITEKCDVYSFGVLALEVIKGK 719
E+ M E D++S G + E+++ K
Sbjct: 188 -----EVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 1/119 (0%)
Query: 185 SEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHV 244
S F +P L+ LDLS + L TLI++GN I S L
Sbjct: 69 SYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQK 128
Query: 245 LDLSSNHIAGEIPMELGRLISLNKLILRGNQL-SGHLPRALGLLTELEYFDLSSNRLNN 302
L ++A +G L +L +L + N + S LP LT LE+ DLSSN++ +
Sbjct: 129 LVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 187
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 68/161 (42%), Gaps = 7/161 (4%)
Query: 169 SLVRAHLGRNNLT--GNISE-DFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSG 225
SL L RN L+ G S+ DFG +LK+LDLS N +SSN+ +L L
Sbjct: 372 SLEFLDLSRNGLSFKGCCSQSDFGTI-SLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQH 429
Query: 226 NNITGRIPPEIGNS-SQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGH-LPRA 283
+N+ + S L LD+S H L SL L + GN + LP
Sbjct: 430 SNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDI 489
Query: 284 LGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQF 324
L L + DLS +L A + L LN SHN F
Sbjct: 490 FTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNF 530
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 103/253 (40%), Gaps = 33/253 (13%)
Query: 8 LTSTGLKGTLQEFSFSSFPHLAYLDLSING--FFGTLPPQVRNLSKLKYLDLSENELSGK 65
LT T KG FS P L +LDLS NG F G LKYLDLS N G
Sbjct: 354 LTFTSNKGG-NAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFN---GV 409
Query: 66 IPPEIGXXXXXXXXXXXXNQFSGTFPPICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSY 125
I S F + L +L + H+N S +L L Y
Sbjct: 410 IT------------------MSSNFLGLEQLEHLDF--QHSNLKQMSEFSVFLSLRNLIY 449
Query: 126 LMLDTNQFTGQLPRNICRSGL--LEILTVNDNHFLGS-IPNL-RNCRSLVRAHLGRNNLT 181
LD + ++ N +GL LE+L + N F + +P++ R+L L + L
Sbjct: 450 --LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE 507
Query: 182 GNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGN-SS 240
F +L+ L++SHNNF+ + + + L L S N+I E+ + S
Sbjct: 508 QLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPS 567
Query: 241 QLHVLDLSSNHIA 253
L L+L+ N A
Sbjct: 568 SLAFLNLTQNDFA 580
Score = 30.0 bits (66), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 51/118 (43%), Gaps = 2/118 (1%)
Query: 17 LQEFSFSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENEL-SGKIPPEIGXXXX 75
L +SF SFP L LDLS ++LS L L L+ N + S + G
Sbjct: 67 LGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSL 126
Query: 76 XXXXXXXXNQFSGTFPPICNLSNLKYISL-HNNKLSGSIPEEIGNLMKLSYLMLDTNQ 132
N S PI +L LK +++ HN S +PE NL L +L L +N+
Sbjct: 127 QKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNK 184
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
Query: 185 SEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHV 244
S F +P L+ LDLS + L TLI++GN I S L
Sbjct: 45 SYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQK 104
Query: 245 LDLSSNHIAGEIPMELGRLISLNKLILRGNQL-SGHLPRALGLLTELEYFDLSSNRL 300
L ++A +G L +L +L + N + S LP LT LE+ DLSSN++
Sbjct: 105 LVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 161
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 68/161 (42%), Gaps = 7/161 (4%)
Query: 169 SLVRAHLGRNNLT--GNISE-DFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSG 225
SL L RN L+ G S+ DFG +LK+LDLS N +SSN+ +L L
Sbjct: 348 SLEFLDLSRNGLSFKGCCSQSDFGT-TSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQH 405
Query: 226 NNITGRIPPEIGNS-SQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGH-LPRA 283
+N+ + S L LD+S H L SL L + GN + LP
Sbjct: 406 SNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDI 465
Query: 284 LGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQF 324
L L + DLS +L A + L LN SHN F
Sbjct: 466 FTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNF 506
Score = 33.1 bits (74), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 104/253 (41%), Gaps = 33/253 (13%)
Query: 8 LTSTGLKGTLQEFSFSSFPHLAYLDLSING--FFGTLPPQVRNLSKLKYLDLSENELSGK 65
LT T KG FS P L +LDLS NG F G + LKYLDLS N G
Sbjct: 330 LTFTSNKGG-NAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFN---GV 385
Query: 66 IPPEIGXXXXXXXXXXXXNQFSGTFPPICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSY 125
I S F + L +L + H+N S +L L Y
Sbjct: 386 IT------------------MSSNFLGLEQLEHLDF--QHSNLKQMSEFSVFLSLRNLIY 425
Query: 126 LMLDTNQFTGQLPRNICRSGL--LEILTVNDNHFLGS-IPNL-RNCRSLVRAHLGRNNLT 181
LD + ++ N +GL LE+L + N F + +P++ R+L L + L
Sbjct: 426 --LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE 483
Query: 182 GNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGN-SS 240
F +L+ L++SHNNF+ + + + L L S N+I E+ + S
Sbjct: 484 QLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPS 543
Query: 241 QLHVLDLSSNHIA 253
L L+L+ N A
Sbjct: 544 SLAFLNLTQNDFA 556
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 51/118 (43%), Gaps = 2/118 (1%)
Query: 17 LQEFSFSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENEL-SGKIPPEIGXXXX 75
L +SF SFP L LDLS ++LS L L L+ N + S + G
Sbjct: 43 LGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSL 102
Query: 76 XXXXXXXXNQFSGTFPPICNLSNLKYISL-HNNKLSGSIPEEIGNLMKLSYLMLDTNQ 132
N S PI +L LK +++ HN S +PE NL L +L L +N+
Sbjct: 103 QKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNK 160
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 30/163 (18%)
Query: 575 CSHVRHSFVVYE--YINRGSLATVLS-----------NNFASEDFDWRKRMNVITGVADA 621
C H+ VYE Y R L V+ + + F R+ ++ + +A
Sbjct: 76 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 135
Query: 622 LSYMHHDCFPPIVHRDISSNNVLLDLEYE---ARVSDFGTAKLLKPNSSNWTELVGTFGY 678
+ Y+H I HRD+ N+L + +++DFG AK ++S T + Y
Sbjct: 136 IQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-Y 191
Query: 679 VAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
VAP E+ K + CD++S GV+ ++ G P
Sbjct: 192 VAP----------EVLGPEKYDKSCDMWSLGVIMYILLCGYPP 224
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 30/163 (18%)
Query: 575 CSHVRHSFVVYE--YINRGSLATVLS-----------NNFASEDFDWRKRMNVITGVADA 621
C H+ VYE Y R L V+ + + F R+ ++ + +A
Sbjct: 75 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 134
Query: 622 LSYMHHDCFPPIVHRDISSNNVLLDLEYE---ARVSDFGTAKLLKPNSSNWTELVGTFGY 678
+ Y+H I HRD+ N+L + +++DFG AK ++S T + Y
Sbjct: 135 IQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-Y 190
Query: 679 VAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
VAP E+ K + CD++S GV+ ++ G P
Sbjct: 191 VAP----------EVLGPEKYDKSCDMWSLGVIMYILLCGYPP 223
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 149 LIYRDLKPENLLIDEQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 195
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 196 IILSKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+++D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGLAKRVK--GRTWX-LCGTPEYLAP----------E 208
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 30/163 (18%)
Query: 575 CSHVRHSFVVYE--YINRGSLATVLS-----------NNFASEDFDWRKRMNVITGVADA 621
C H+ VYE Y R L V+ + + F R+ ++ + +A
Sbjct: 120 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 179
Query: 622 LSYMHHDCFPPIVHRDISSNNVLLDLEYE---ARVSDFGTAKLLKPNSSNWTELVGTFGY 678
+ Y+H I HRD+ N+L + +++DFG AK ++S T + Y
Sbjct: 180 IQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-Y 235
Query: 679 VAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
VAP E+ K + CD++S GV+ ++ G P
Sbjct: 236 VAP----------EVLGPEKYDKSCDMWSLGVIMYILLCGYPP 268
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 30/163 (18%)
Query: 575 CSHVRHSFVVYE--YINRGSLATVLS-----------NNFASEDFDWRKRMNVITGVADA 621
C H+ VYE Y R L V+ + + F R+ ++ + +A
Sbjct: 74 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 133
Query: 622 LSYMHHDCFPPIVHRDISSNNVLLDLEYE---ARVSDFGTAKLLKPNSSNWTELVGTFGY 678
+ Y+H I HRD+ N+L + +++DFG AK ++S T + Y
Sbjct: 134 IQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-Y 189
Query: 679 VAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
VAP E+ K + CD++S GV+ ++ G P
Sbjct: 190 VAP----------EVLGPEKYDKSCDMWSLGVIMYILLCGYPP 222
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 118/290 (40%), Gaps = 59/290 (20%)
Query: 514 IGKGEHRSVYRAKLP--SGDKI--AVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
+G+G VY G+KI AVK + + ++++F++E + + H +IV
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKK---DCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 570 KFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVIT------GVADALS 623
K G ++++ E G L L N + + V+T + A++
Sbjct: 89 KLIGIIEE-EPTWIIMELYPYGELGHYLERN--------KNSLKVLTLVLYSLQICKAMA 139
Query: 624 YMHH-DCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPN---SSNWTELVGTFGYV 679
Y+ +C VHRDI+ N+L+ ++ DFG ++ ++ ++ T L ++
Sbjct: 140 YLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWM 193
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXXXXXXXXXINIE 738
+P N + T DV+ F V E++ GK P N +
Sbjct: 194 SPESINF----------RRFTTASDVWMFAVCMWEILSFGKQP---------FFWLENKD 234
Query: 739 FNAMLDH--RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTM-QTVCQL 785
+L+ RLP P L L ++M C D P+ RP + VC L
Sbjct: 235 VIGVLEKGDRLPKPDL-CPPVLYTLMT---RCWDYDPSDRPRFTELVCSL 280
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 71/166 (42%), Gaps = 28/166 (16%)
Query: 563 IRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFA-SEDFDWRKRMNVITGVADA 621
+RH NIV+F H +V EY + G L + N SED +I+GV
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV--- 128
Query: 622 LSYMHHDCFPPIVHRDISSNNVLLDLEYEAR--VSDFGTAKL----LKPNSSNWTELVGT 675
SY H + HRD+ N LLD R + FG +K +P S+ VGT
Sbjct: 129 -SYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST-----VGT 179
Query: 676 FGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
Y+AP L + Y K+ DV+S GV ++ G +P
Sbjct: 180 PAYIAPE------VLLKKEYDGKVA---DVWSCGVTLYVMLVGAYP 216
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 30/163 (18%)
Query: 575 CSHVRHSFVVYE--YINRGSLATVLS-----------NNFASEDFDWRKRMNVITGVADA 621
C H+ VYE Y R L V+ + + F R+ ++ + +A
Sbjct: 114 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 173
Query: 622 LSYMHHDCFPPIVHRDISSNNVLLDLEYE---ARVSDFGTAKLLKPNSSNWTELVGTFGY 678
+ Y+H I HRD+ N+L + +++DFG AK ++S T + Y
Sbjct: 174 IQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-Y 229
Query: 679 VAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
VAP E+ K + CD++S GV+ ++ G P
Sbjct: 230 VAP----------EVLGPEKYDKSCDMWSLGVIMYILLCGYPP 262
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 29/213 (13%)
Query: 514 IGKGEHRSVYRAKLPSGDK-IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
IG G V A D+ +A+KK + PF N + K E+ + + H+NI+
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ--THAKRAYRELVLMKCVNHKNIISLL 82
Query: 573 GFCS------HVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
+ + ++V E ++ +L V+ E RM+ + + L +
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHE------RMSYL--LYQMLCGIK 133
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNI 686
H I+HRD+ +N+++ + ++ DFG A+ S T V T Y AP
Sbjct: 134 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAP----- 187
Query: 687 GLHLAELAYTMKITEKCDVYSFGVLALEVIKGK 719
E+ M E D++S G + E+++ K
Sbjct: 188 -----EVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 29/213 (13%)
Query: 514 IGKGEHRSVYRAKLPSGDK-IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
IG G V A D+ +A+KK + PF N + K E+ + + H+NI+
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ--THAKRAYRELVLMKCVNHKNIISLL 83
Query: 573 GFCS------HVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
+ + ++V E ++ +L V+ E RM+ + + L +
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHE------RMSYL--LYQMLCGIK 134
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNI 686
H I+HRD+ +N+++ + ++ DFG A+ S T V T Y AP
Sbjct: 135 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAP----- 188
Query: 687 GLHLAELAYTMKITEKCDVYSFGVLALEVIKGK 719
E+ M E D++S G + E+++ K
Sbjct: 189 -----EVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+++D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 208
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 82/193 (42%), Gaps = 28/193 (14%)
Query: 533 IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCS------HVRHSFVVYE 586
+A+KK + PF N + K E+ + + H+NI+ + + ++V E
Sbjct: 52 VAIKKLSRPFQNQ--THAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME 109
Query: 587 YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLD 646
++ +L V+ E + ++ + + ++H I+HRD+ +N+++
Sbjct: 110 LMD-ANLXQVIQMELDHERMSY-----LLYQMLXGIKHLHSAG---IIHRDLKPSNIVVK 160
Query: 647 LEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVY 706
+ ++ DFG A+ S T V T Y AP E+ M E D++
Sbjct: 161 SDXTLKILDFGLARTAG-TSFMMTPYVVTRYYRAP----------EVILGMGYKENVDIW 209
Query: 707 SFGVLALEVIKGK 719
S G + E+++ K
Sbjct: 210 SVGCIMGEMVRHK 222
>pdb|2Z62|A Chain A, Crystal Structure Of The Tv3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z65|A Chain A, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
pdb|2Z65|B Chain B, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
Length = 276
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 1/119 (0%)
Query: 185 SEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHV 244
S F +P L+ LDLS + L TLI++GN I S L
Sbjct: 45 SYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQK 104
Query: 245 LDLSSNHIAGEIPMELGRLISLNKLILRGNQL-SGHLPRALGLLTELEYFDLSSNRLNN 302
L ++A +G L +L +L + N + S LP LT LE+ DLSSN++ +
Sbjct: 105 LVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 29/213 (13%)
Query: 514 IGKGEHRSVYRAKLPSGDK-IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
IG G V A D+ +A+KK + PF N + K E+ + + H+NI+
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ--THAKRAYRELVLMKCVNHKNIISLL 83
Query: 573 GFCS------HVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
+ + ++V E ++ +L V+ E RM+ + + L +
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHE------RMSYL--LYQMLCGIK 134
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNI 686
H I+HRD+ +N+++ + ++ DFG A+ S T V T Y AP
Sbjct: 135 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAP----- 188
Query: 687 GLHLAELAYTMKITEKCDVYSFGVLALEVIKGK 719
E+ M E D++S G + E+++ K
Sbjct: 189 -----EVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 1/119 (0%)
Query: 185 SEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHV 244
S F +P L+ LDLS + L TLI++GN I S L
Sbjct: 45 SYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQK 104
Query: 245 LDLSSNHIAGEIPMELGRLISLNKLILRGNQL-SGHLPRALGLLTELEYFDLSSNRLNN 302
L ++A +G L +L +L + N + S LP LT LE+ DLSSN++ +
Sbjct: 105 LVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
Score = 32.3 bits (72), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 90/217 (41%), Gaps = 11/217 (5%)
Query: 88 GTFPPICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLDTN--QFTGQLPRNICRSG 145
G FP + L +LK ++ +NK G+ E+ +L L +L L N F G ++ +
Sbjct: 317 GQFPTL-KLKSLKRLTFTSNK-GGNAFSEV-DLPSLEFLDLSRNGLSFKGCCSQSDFGTT 373
Query: 146 LLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNISEDFGIY---PNLKFLDLSHN 202
L+ L ++ N + N L +NL +SE F ++ NL +LD+SH
Sbjct: 374 SLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLK-QMSE-FSVFLSLRNLIYLDISHT 431
Query: 203 NFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNS-SQLHVLDLSSNHIAGEIPMELG 261
+ + + L L ++GN+ P+I L LDLS + P
Sbjct: 432 HTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFN 491
Query: 262 RLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSN 298
L SL L + NQL LT L+ L +N
Sbjct: 492 SLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTN 528
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 51/118 (43%), Gaps = 2/118 (1%)
Query: 17 LQEFSFSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENEL-SGKIPPEIGXXXX 75
L +SF SFP L LDLS ++LS L L L+ N + S + G
Sbjct: 43 LGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSL 102
Query: 76 XXXXXXXXNQFSGTFPPICNLSNLKYISL-HNNKLSGSIPEEIGNLMKLSYLMLDTNQ 132
N S PI +L LK +++ HN S +PE NL L +L L +N+
Sbjct: 103 QKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNK 160
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 67/161 (41%), Gaps = 7/161 (4%)
Query: 169 SLVRAHLGRNNLT--GNISE-DFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSG 225
SL L RN L+ G S+ DFG +LK+LDLS N +SSN+ +L L
Sbjct: 348 SLEFLDLSRNGLSFKGCCSQSDFGT-TSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQH 405
Query: 226 NNITGRIPPEIGNS-SQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGH-LPRA 283
+N+ + S L LD+S H L SL L + GN + LP
Sbjct: 406 SNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDI 465
Query: 284 LGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQF 324
L L + DLS +L A + L LN + NQ
Sbjct: 466 FTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQL 506
Score = 29.6 bits (65), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 8 LTSTGLKGTLQEFSFSSFPHLAYLDLSING--FFGTLPPQVRNLSKLKYLDLSEN 60
LT T KG FS P L +LDLS NG F G + LKYLDLS N
Sbjct: 330 LTFTSNKGG-NAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFN 383
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 30/163 (18%)
Query: 575 CSHVRHSFVVYE--YINRGSLATVLS-----------NNFASEDFDWRKRMNVITGVADA 621
C H+ VYE Y R L V+ + + F R+ ++ + +A
Sbjct: 68 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 127
Query: 622 LSYMHHDCFPPIVHRDISSNNVLLDLEYE---ARVSDFGTAKLLKPNSSNWTELVGTFGY 678
+ Y+H I HRD+ N+L + +++DFG AK ++S T + Y
Sbjct: 128 IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-Y 183
Query: 679 VAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
VAP E+ K + CD++S GV+ ++ G P
Sbjct: 184 VAP----------EVLGPEKYDKSCDMWSLGVIMYILLCGYPP 216
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 104/250 (41%), Gaps = 35/250 (14%)
Query: 477 SSKNDTRGIFHSVLDFDGKIMYEEIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGDK-IAV 535
+SK+ F+SV D +++R ++ IG G V A D+ +A+
Sbjct: 1 ASKSKVDNQFYSVEVGDSTFT---VLKRYQNLKP---IGSGAQGIVCAAYDAVLDRNVAI 54
Query: 536 KKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCS------HVRHSFVVYEYIN 589
KK + PF N + K E+ + + H+NI+ + + ++V E ++
Sbjct: 55 KKLSRPFQNQ--THAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD 112
Query: 590 RGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEY 649
+L V+ E RM+ + + L + H I+HRD+ +N+++ +
Sbjct: 113 -ANLCQVIQMELDHE------RMSYL--LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 163
Query: 650 EARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFG 709
++ DFG A+ S T V T Y AP E+ M E D++S G
Sbjct: 164 TLKILDFGLARTAG-TSFMMTPYVVTRYYRAP----------EVILGMGYKENVDIWSVG 212
Query: 710 VLALEVIKGK 719
+ E+++ K
Sbjct: 213 CIMGEMVRHK 222
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 30/163 (18%)
Query: 575 CSHVRHSFVVYE--YINRGSLATVLS-----------NNFASEDFDWRKRMNVITGVADA 621
C H+ VYE Y R L V+ + + F R+ ++ + +A
Sbjct: 70 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 129
Query: 622 LSYMHHDCFPPIVHRDISSNNVLLDLEYE---ARVSDFGTAKLLKPNSSNWTELVGTFGY 678
+ Y+H I HRD+ N+L + +++DFG AK ++S T + Y
Sbjct: 130 IQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-Y 185
Query: 679 VAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
VAP E+ K + CD++S GV+ ++ G P
Sbjct: 186 VAP----------EVLGPEKYDKSCDMWSLGVIMYILLCGYPP 218
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 30/163 (18%)
Query: 575 CSHVRHSFVVYE--YINRGSLATVLS-----------NNFASEDFDWRKRMNVITGVADA 621
C H+ VYE Y R L V+ + + F R+ ++ + +A
Sbjct: 69 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 128
Query: 622 LSYMHHDCFPPIVHRDISSNNVLLDLEYE---ARVSDFGTAKLLKPNSSNWTELVGTFGY 678
+ Y+H I HRD+ N+L + +++DFG AK ++S T + Y
Sbjct: 129 IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-Y 184
Query: 679 VAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
VAP E+ K + CD++S GV+ ++ G P
Sbjct: 185 VAP----------EVLGPEKYDKSCDMWSLGVIMYILLCGYPP 217
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 118/290 (40%), Gaps = 59/290 (20%)
Query: 514 IGKGEHRSVYRAKLP--SGDKI--AVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
+G+G VY G+KI AVK + + ++++F++E + + H +IV
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKK---DCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 570 KFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVIT------GVADALS 623
K G ++++ E G L L N + + V+T + A++
Sbjct: 77 KLIGIIEE-EPTWIIMELYPYGELGHYLERN--------KNSLKVLTLVLYSLQICKAMA 127
Query: 624 YMHH-DCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPN---SSNWTELVGTFGYV 679
Y+ +C VHRDI+ N+L+ ++ DFG ++ ++ ++ T L ++
Sbjct: 128 YLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWM 181
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXXXXXXXXXINIE 738
+P N + T DV+ F V E++ GK P N +
Sbjct: 182 SPESINF----------RRFTTASDVWMFAVCMWEILSFGKQP---------FFWLENKD 222
Query: 739 FNAMLDH--RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTM-QTVCQL 785
+L+ RLP P L L ++M C D P+ RP + VC L
Sbjct: 223 VIGVLEKGDRLPKPDL-CPPVLYTLMT---RCWDYDPSDRPRFTELVCSL 268
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 104/250 (41%), Gaps = 35/250 (14%)
Query: 477 SSKNDTRGIFHSVLDFDGKIMYEEIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGDK-IAV 535
+SK+ F+SV D +++R ++ IG G V A D+ +A+
Sbjct: 2 ASKSKVDNQFYSVEVGDSTFT---VLKRYQNLKP---IGSGAQGIVCAAYDAVLDRNVAI 55
Query: 536 KKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCS------HVRHSFVVYEYIN 589
KK + PF N + K E+ + + H+NI+ + + ++V E ++
Sbjct: 56 KKLSRPFQNQ--THAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD 113
Query: 590 RGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEY 649
+L V+ E RM+ + + L + H I+HRD+ +N+++ +
Sbjct: 114 -ANLCQVIQMELDHE------RMSYL--LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 164
Query: 650 EARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFG 709
++ DFG A+ S T V T Y AP E+ M E D++S G
Sbjct: 165 TLKILDFGLARTAG-TSFMMTPYVVTRYYRAP----------EVILGMGYKENVDIWSVG 213
Query: 710 VLALEVIKGK 719
+ E+++ K
Sbjct: 214 CIMGEMVRHK 223
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 29/213 (13%)
Query: 514 IGKGEHRSVYRAKLPSGDK-IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
IG G V A D+ +A+KK + PF N + K E+ + + H+NI+
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ--THAKRAYRELVLMKCVNHKNIISLL 90
Query: 573 GFCS------HVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
+ + ++V E ++ +L V+ E RM+ + + L +
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHE------RMSYL--LYQMLCGIK 141
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNI 686
H I+HRD+ +N+++ + ++ DFG A+ S T V T Y AP
Sbjct: 142 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAP----- 195
Query: 687 GLHLAELAYTMKITEKCDVYSFGVLALEVIKGK 719
E+ M E D++S G + E+++ K
Sbjct: 196 -----EVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 29/213 (13%)
Query: 514 IGKGEHRSVYRAKLPSGDK-IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
IG G V A D+ +A+KK + PF N + K E+ + + H+NI+
Sbjct: 31 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ--THAKRAYRELVLMKCVNHKNIISLL 88
Query: 573 GFCS------HVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
+ + ++V E ++ +L V+ E RM+ + + L +
Sbjct: 89 NVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHE------RMSYL--LYQMLCGIK 139
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNI 686
H I+HRD+ +N+++ + ++ DFG A+ S T V T Y AP
Sbjct: 140 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAP----- 193
Query: 687 GLHLAELAYTMKITEKCDVYSFGVLALEVIKGK 719
E+ M E D++S G + E+++ K
Sbjct: 194 -----EVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 30/163 (18%)
Query: 575 CSHVRHSFVVYE--YINRGSLATVLS-----------NNFASEDFDWRKRMNVITGVADA 621
C H+ VYE Y R L V+ + + F R+ ++ + +A
Sbjct: 70 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 129
Query: 622 LSYMHHDCFPPIVHRDISSNNVLLDLEYE---ARVSDFGTAKLLKPNSSNWTELVGTFGY 678
+ Y+H I HRD+ N+L + +++DFG AK ++S T + Y
Sbjct: 130 IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-Y 185
Query: 679 VAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
VAP E+ K + CD++S GV+ ++ G P
Sbjct: 186 VAP----------EVLGPEKYDKSCDMWSLGVIMYILLCGYPP 218
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 29/213 (13%)
Query: 514 IGKGEHRSVYRAKLPSGDK-IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
IG G V A D+ +A+KK + PF N + K E+ + + H+NI+
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ--THAKRAYRELVLMKCVNHKNIISLL 127
Query: 573 GFCS------HVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
+ + ++V E ++ +L V+ E RM+ + + L +
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHE------RMSYL--LYQMLCGIK 178
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNI 686
H I+HRD+ +N+++ + ++ DFG A+ S T V T Y AP
Sbjct: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAP----- 232
Query: 687 GLHLAELAYTMKITEKCDVYSFGVLALEVIKGK 719
E+ M E D++S G + E+++ K
Sbjct: 233 -----EVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 29/213 (13%)
Query: 514 IGKGEHRSVYRAKLPSGDK-IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
IG G V A D+ +A+KK + PF N + K E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ--THAKRAYRELVLMKCVNHKNIISLL 89
Query: 573 GFCS------HVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
+ + ++V E ++ +L V+ E RM+ + + L +
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHE------RMSYL--LYQMLCGIK 140
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNI 686
H I+HRD+ +N+++ + ++ DFG A+ S T V T Y AP
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAP----- 194
Query: 687 GLHLAELAYTMKITEKCDVYSFGVLALEVIKGK 719
E+ M E D++S G + E+++ K
Sbjct: 195 -----EVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 118/290 (40%), Gaps = 59/290 (20%)
Query: 514 IGKGEHRSVYRAKLP--SGDKI--AVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIV 569
+G+G VY G+KI AVK + + ++++F++E + + H +IV
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKK---DCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 570 KFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVIT------GVADALS 623
K G ++++ E G L L N + + V+T + A++
Sbjct: 73 KLIGIIEE-EPTWIIMELYPYGELGHYLERN--------KNSLKVLTLVLYSLQICKAMA 123
Query: 624 YMHH-DCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPN---SSNWTELVGTFGYV 679
Y+ +C VHRDI+ N+L+ ++ DFG ++ ++ ++ T L ++
Sbjct: 124 YLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWM 177
Query: 680 APAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDXXXXXXXXXXXINIE 738
+P N + T DV+ F V E++ GK P N +
Sbjct: 178 SPESINF----------RRFTTASDVWMFAVCMWEILSFGKQP---------FFWLENKD 218
Query: 739 FNAMLDH--RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTM-QTVCQL 785
+L+ RLP P L L ++M C D P+ RP + VC L
Sbjct: 219 VIGVLEKGDRLPKPDL-CPPVLYTLMT---RCWDYDPSDRPRFTELVCSL 264
>pdb|2XOT|A Chain A, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
pdb|2XOT|B Chain B, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
Length = 361
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 79/167 (47%), Gaps = 15/167 (8%)
Query: 164 LRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIV 223
L N SL+ +H N+L SE F PNL++LDLS N+ + + L L++
Sbjct: 63 LTNLHSLLLSH---NHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLL 119
Query: 224 SGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMEL----GRLISLNKLILRGNQLSGH 279
N+I + +QL L LS N I+ P+EL +L L L L N+L
Sbjct: 120 YNNHIVVVDRNAFEDMAQLQKLYLSQNQIS-RFPVELIKDGNKLPKLMLLDLSSNKLKK- 177
Query: 280 LPRALGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQ 326
LP L L +L + + L+N+ LE +++L FSH Q+ Q
Sbjct: 178 LP--LTDLQKLPAWVKNGLYLHNNPLECDCKLYQL----FSHWQYRQ 218
>pdb|3UL9|A Chain A, Structure Of The Tv3 Mutant M41e
Length = 278
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 1/119 (0%)
Query: 185 SEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHV 244
S F +P L+ LDLS + L TLI++GN I S L
Sbjct: 46 SYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQK 105
Query: 245 LDLSSNHIAGEIPMELGRLISLNKLILRGNQL-SGHLPRALGLLTELEYFDLSSNRLNN 302
L ++A +G L +L +L + N + S LP LT LE+ DLSSN++ +
Sbjct: 106 LVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 164
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 81/197 (41%), Gaps = 23/197 (11%)
Query: 550 QKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWR 609
++E E+ L +IRH NI+ + + ++ E ++ G L L+ E
Sbjct: 73 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK---ESLTED 129
Query: 610 KRMNVITGVADALSYMHHDCFPPIVHRDISSNNV-LLDLEY---EARVSDFGTAKLLKPN 665
+ + + D + Y+H I H D+ N+ LLD ++ DFG A ++
Sbjct: 130 EATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG 186
Query: 666 SSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP--GD 723
+ + + GT +VAP E+ + + D++S GV+ ++ G P G+
Sbjct: 187 NE-FKNIFGTPEFVAP----------EIVNYEPLGLEADMWSIGVITYILLSGASPFLGE 235
Query: 724 XXXXXXXXXXXINIEFN 740
+N +F+
Sbjct: 236 TKQETLTNISAVNYDFD 252
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+++D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 162 LIYRDLKPENLIIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 208
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL E+ G P
Sbjct: 209 IIISKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 29/213 (13%)
Query: 514 IGKGEHRSVYRAKLPSGDK-IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
IG G V A D+ +A+KK + PF N + K E+ + + H+NI+
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ--THAKRAYRELVLMKCVNHKNIISLL 127
Query: 573 GFCS------HVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH 626
+ + ++V E ++ +L V+ E RM+ + + L +
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHE------RMSYL--LYQMLCGIK 178
Query: 627 HDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNI 686
H I+HRD+ +N+++ + ++ DFG A+ S T V T Y AP
Sbjct: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAP----- 232
Query: 687 GLHLAELAYTMKITEKCDVYSFGVLALEVIKGK 719
E+ M E D++S G + E+++ K
Sbjct: 233 -----EVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 29/140 (20%)
Query: 584 VYEYIN-RGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNN 642
++++I RG+L L+ +F W+ V +A+ + H +C ++HRDI N
Sbjct: 102 LFDFITERGALQEELARSFF-----WQ--------VLEAVRHCH-NC--GVLHRDIKDEN 145
Query: 643 VLLDLEY-EARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITE 701
+L+DL E ++ DFG+ LLK + +T+ GT Y P + Y
Sbjct: 146 ILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEW---------IRYHRYHGR 194
Query: 702 KCDVYSFGVLALEVIKGKHP 721
V+S G+L +++ G P
Sbjct: 195 SAAVWSLGILLYDMVCGDIP 214
>pdb|3UL7|A Chain A, Crystal Structure Of The Tv3 Mutant F63w
Length = 278
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 1/119 (0%)
Query: 185 SEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHV 244
S F +P L+ LDLS + L TLI++GN I S L
Sbjct: 46 SYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQK 105
Query: 245 LDLSSNHIAGEIPMELGRLISLNKLILRGNQL-SGHLPRALGLLTELEYFDLSSNRLNN 302
L ++A +G L +L +L + N + S LP LT LE+ DLSSN++ +
Sbjct: 106 LVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 164
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 81/197 (41%), Gaps = 23/197 (11%)
Query: 550 QKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWR 609
++E E+ L +IRH NI+ + + ++ E ++ G L L+ E
Sbjct: 52 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK---ESLTED 108
Query: 610 KRMNVITGVADALSYMHHDCFPPIVHRDISSNNV-LLDLEY---EARVSDFGTAKLLKPN 665
+ + + D + Y+H I H D+ N+ LLD ++ DFG A ++
Sbjct: 109 EATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA- 164
Query: 666 SSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP--GD 723
+ + + GT +VAP E+ + + D++S GV+ ++ G P G+
Sbjct: 165 GNEFKNIFGTPEFVAP----------EIVNYEPLGLEADMWSIGVITYILLSGASPFLGE 214
Query: 724 XXXXXXXXXXXINIEFN 740
+N +F+
Sbjct: 215 TKQETLTNISAVNYDFD 231
>pdb|3ULA|A Chain A, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
pdb|3ULA|C Chain C, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
Length = 279
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 1/119 (0%)
Query: 185 SEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHV 244
S F +P L+ LDLS + L TLI++GN I S L
Sbjct: 47 SYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQK 106
Query: 245 LDLSSNHIAGEIPMELGRLISLNKLILRGNQL-SGHLPRALGLLTELEYFDLSSNRLNN 302
L ++A +G L +L +L + N + S LP LT LE+ DLSSN++ +
Sbjct: 107 LVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 165
Score = 29.3 bits (64), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 51/119 (42%), Gaps = 2/119 (1%)
Query: 17 LQEFSFSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENEL-SGKIPPEIGXXXX 75
L +SF SFP L LDLS ++LS L L L+ N + S + G
Sbjct: 45 LGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSL 104
Query: 76 XXXXXXXXNQFSGTFPPICNLSNLKYISL-HNNKLSGSIPEEIGNLMKLSYLMLDTNQF 133
N S PI +L LK +++ HN S +PE NL L +L L +N+
Sbjct: 105 QKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 163
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 22/166 (13%)
Query: 565 HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSY 624
H N++++ FC+ F +YI A L +DF + IT + S
Sbjct: 77 HPNVIRY--FCTEKDRQF---QYIAIELCAATLQEYVEQKDFA-HLGLEPITLLQQTTSG 130
Query: 625 MHHDCFPPIVHRDISSNNVLLDL-----EYEARVSDFGTAKLL---KPNSSNWTELVGTF 676
+ H IVHRD+ +N+L+ + + +A +SDFG K L + + S + + GT
Sbjct: 131 LAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTE 190
Query: 677 GYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVI-KGKHP 721
G++AP + T D++S G + VI +G HP
Sbjct: 191 GWIAP-------EMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHP 229
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 29/140 (20%)
Query: 584 VYEYIN-RGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNN 642
++++I RG+L L+ +F W+ V +A+ + H +C ++HRDI N
Sbjct: 124 LFDFITERGALQEELARSFF-----WQ--------VLEAVRHCH-NC--GVLHRDIKDEN 167
Query: 643 VLLDLEY-EARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITE 701
+L+DL E ++ DFG+ LLK + +T+ GT Y P + Y
Sbjct: 168 ILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEW---------IRYHRYHGR 216
Query: 702 KCDVYSFGVLALEVIKGKHP 721
V+S G+L +++ G P
Sbjct: 217 SAAVWSLGILLYDMVCGDIP 236
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 29/140 (20%)
Query: 584 VYEYIN-RGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNN 642
++++I RG+L L+ +F W+ V +A+ + H +C ++HRDI N
Sbjct: 144 LFDFITERGALQEELARSFF-----WQ--------VLEAVRHCH-NC--GVLHRDIKDEN 187
Query: 643 VLLDLEY-EARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITE 701
+L+DL E ++ DFG+ LLK + +T+ GT Y P + Y
Sbjct: 188 ILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEW---------IRYHRYHGR 236
Query: 702 KCDVYSFGVLALEVIKGKHP 721
V+S G+L +++ G P
Sbjct: 237 SAAVWSLGILLYDMVCGDIP 256
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 81/197 (41%), Gaps = 23/197 (11%)
Query: 550 QKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWR 609
++E E+ L +IRH NI+ + + ++ E ++ G L L+ E
Sbjct: 59 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK---ESLTED 115
Query: 610 KRMNVITGVADALSYMHHDCFPPIVHRDISSNNV-LLDLEY---EARVSDFGTAKLLKPN 665
+ + + D + Y+H I H D+ N+ LLD ++ DFG A ++
Sbjct: 116 EATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA- 171
Query: 666 SSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP--GD 723
+ + + GT +VAP E+ + + D++S GV+ ++ G P G+
Sbjct: 172 GNEFKNIFGTPEFVAP----------EIVNYEPLGLEADMWSIGVITYILLSGASPFLGE 221
Query: 724 XXXXXXXXXXXINIEFN 740
+N +F+
Sbjct: 222 TKQETLTNISAVNYDFD 238
>pdb|3UL8|A Chain A, Crystal Structure Of The Tv3 Mutant V134l
Length = 279
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 1/119 (0%)
Query: 185 SEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHV 244
S F +P L+ LDLS + L TLI++GN I S L
Sbjct: 47 SYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQK 106
Query: 245 LDLSSNHIAGEIPMELGRLISLNKLILRGNQL-SGHLPRALGLLTELEYFDLSSNRLNN 302
L ++A +G L +L +L + N + S LP LT LE+ DLSSN++ +
Sbjct: 107 LVALETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 165
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 29/140 (20%)
Query: 584 VYEYIN-RGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNN 642
++++I RG+L L+ +F W+ V +A+ + H +C ++HRDI N
Sbjct: 149 LFDFITERGALQEELARSFF-----WQ--------VLEAVRHCH-NC--GVLHRDIKDEN 192
Query: 643 VLLDLEY-EARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITE 701
+L+DL E ++ DFG+ LLK + +T+ GT Y P + Y
Sbjct: 193 ILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEW---------IRYHRYHGR 241
Query: 702 KCDVYSFGVLALEVIKGKHP 721
V+S G+L +++ G P
Sbjct: 242 SAAVWSLGILLYDMVCGDIP 261
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAE 692
+++RD+ N+L+D + +V+DFG AK +K W L GT Y+AP E
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAP----------E 208
Query: 693 LAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ + + D ++ GVL ++ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 29/140 (20%)
Query: 584 VYEYIN-RGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNN 642
++++I RG+L L+ +F W+ V +A+ + H +C ++HRDI N
Sbjct: 144 LFDFITERGALQEELARSFF-----WQ--------VLEAVRHCH-NC--GVLHRDIKDEN 187
Query: 643 VLLDLEY-EARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITE 701
+L+DL E ++ DFG+ LLK + +T+ GT Y P + Y
Sbjct: 188 ILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEW---------IRYHRYHGR 236
Query: 702 KCDVYSFGVLALEVIKGKHP 721
V+S G+L +++ G P
Sbjct: 237 SAAVWSLGILLYDMVCGDIP 256
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 29/140 (20%)
Query: 584 VYEYIN-RGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNN 642
++++I RG+L L+ +F W+ V +A+ + H +C ++HRDI N
Sbjct: 144 LFDFITERGALQEELARSFF-----WQ--------VLEAVRHCH-NC--GVLHRDIKDEN 187
Query: 643 VLLDLEY-EARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITE 701
+L+DL E ++ DFG+ LLK + +T+ GT Y P + Y
Sbjct: 188 ILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEW---------IRYHRYHGR 236
Query: 702 KCDVYSFGVLALEVIKGKHP 721
V+S G+L +++ G P
Sbjct: 237 SAAVWSLGILLYDMVCGDIP 256
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 29/140 (20%)
Query: 584 VYEYIN-RGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNN 642
++++I RG+L L+ +F W+ V +A+ + H +C ++HRDI N
Sbjct: 129 LFDFITERGALQEELARSFF-----WQ--------VLEAVRHCH-NC--GVLHRDIKDEN 172
Query: 643 VLLDLEY-EARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITE 701
+L+DL E ++ DFG+ LLK + +T+ GT Y P + Y
Sbjct: 173 ILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEW---------IRYHRYHGR 221
Query: 702 KCDVYSFGVLALEVIKGKHP 721
V+S G+L +++ G P
Sbjct: 222 SAAVWSLGILLYDMVCGDIP 241
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 29/140 (20%)
Query: 584 VYEYIN-RGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNN 642
++++I RG+L L+ +F W+ V +A+ + H +C ++HRDI N
Sbjct: 129 LFDFITERGALQEELARSFF-----WQ--------VLEAVRHCH-NC--GVLHRDIKDEN 172
Query: 643 VLLDLEY-EARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITE 701
+L+DL E ++ DFG+ LLK + +T+ GT Y P + Y
Sbjct: 173 ILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEW---------IRYHRYHGR 221
Query: 702 KCDVYSFGVLALEVIKGKHP 721
V+S G+L +++ G P
Sbjct: 222 SAAVWSLGILLYDMVCGDIP 241
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 29/140 (20%)
Query: 584 VYEYIN-RGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNN 642
++++I RG+L L+ +F W+ V +A+ + H +C ++HRDI N
Sbjct: 136 LFDFITERGALQEELARSFF-----WQ--------VLEAVRHCH-NCG--VLHRDIKDEN 179
Query: 643 VLLDLEY-EARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITE 701
+L+DL E ++ DFG+ LLK + +T+ GT Y P + Y
Sbjct: 180 ILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEW---------IRYHRYHGR 228
Query: 702 KCDVYSFGVLALEVIKGKHP 721
V+S G+L +++ G P
Sbjct: 229 SAAVWSLGILLYDMVCGDIP 248
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 29/140 (20%)
Query: 584 VYEYIN-RGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNN 642
++++I RG+L L+ +F W+ V +A+ + H +C ++HRDI N
Sbjct: 102 LFDFITERGALQEELARSFF-----WQ--------VLEAVRHCH-NC--GVLHRDIKDEN 145
Query: 643 VLLDLEY-EARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITE 701
+L+DL E ++ DFG+ LLK + +T+ GT Y P + Y
Sbjct: 146 ILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEW---------IRYHRYHGR 194
Query: 702 KCDVYSFGVLALEVIKGKHP 721
V+S G+L +++ G P
Sbjct: 195 SAAVWSLGILLYDMVCGDIP 214
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 29/140 (20%)
Query: 584 VYEYIN-RGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNN 642
++++I RG+L L+ +F W+ V +A+ + H +C ++HRDI N
Sbjct: 130 LFDFITERGALQEELARSFF-----WQ--------VLEAVRHCH-NC--GVLHRDIKDEN 173
Query: 643 VLLDLEY-EARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITE 701
+L+DL E ++ DFG+ LLK + +T+ GT Y P + Y
Sbjct: 174 ILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEW---------IRYHRYHGR 222
Query: 702 KCDVYSFGVLALEVIKGKHP 721
V+S G+L +++ G P
Sbjct: 223 SAAVWSLGILLYDMVCGDIP 242
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 29/140 (20%)
Query: 584 VYEYIN-RGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNN 642
++++I RG+L L+ +F W+ V +A+ + H +C ++HRDI N
Sbjct: 130 LFDFITERGALQEELARSFF-----WQ--------VLEAVRHCH-NC--GVLHRDIKDEN 173
Query: 643 VLLDLEY-EARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITE 701
+L+DL E ++ DFG+ LLK + +T+ GT Y P + Y
Sbjct: 174 ILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEW---------IRYHRYHGR 222
Query: 702 KCDVYSFGVLALEVIKGKHP 721
V+S G+L +++ G P
Sbjct: 223 SAAVWSLGILLYDMVCGDIP 242
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 29/140 (20%)
Query: 584 VYEYIN-RGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNN 642
++++I RG+L L+ +F W+ V +A+ + H +C ++HRDI N
Sbjct: 130 LFDFITERGALQEELARSFF-----WQ--------VLEAVRHCH-NC--GVLHRDIKDEN 173
Query: 643 VLLDLEY-EARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITE 701
+L+DL E ++ DFG+ LLK + +T+ GT Y P + Y
Sbjct: 174 ILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEW---------IRYHRYHGR 222
Query: 702 KCDVYSFGVLALEVIKGKHP 721
V+S G+L +++ G P
Sbjct: 223 SAAVWSLGILLYDMVCGDIP 242
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 29/140 (20%)
Query: 584 VYEYIN-RGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNN 642
++++I RG+L L+ +F W+ V +A+ + H +C ++HRDI N
Sbjct: 129 LFDFITERGALQEELARSFF-----WQ--------VLEAVRHCH-NC--GVLHRDIKDEN 172
Query: 643 VLLDLEY-EARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITE 701
+L+DL E ++ DFG+ LLK + +T+ GT Y P + Y
Sbjct: 173 ILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEW---------IRYHRYHGR 221
Query: 702 KCDVYSFGVLALEVIKGKHP 721
V+S G+L +++ G P
Sbjct: 222 SAAVWSLGILLYDMVCGDIP 241
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 29/140 (20%)
Query: 584 VYEYIN-RGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNN 642
++++I RG+L L+ +F W+ V +A+ + H +C ++HRDI N
Sbjct: 130 LFDFITERGALQEELARSFF-----WQ--------VLEAVRHCH-NC--GVLHRDIKDEN 173
Query: 643 VLLDLEY-EARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITE 701
+L+DL E ++ DFG+ LLK + +T+ GT Y P + Y
Sbjct: 174 ILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEW---------IRYHRYHGR 222
Query: 702 KCDVYSFGVLALEVIKGKHP 721
V+S G+L +++ G P
Sbjct: 223 SAAVWSLGILLYDMVCGDIP 242
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 29/140 (20%)
Query: 584 VYEYIN-RGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNN 642
++++I RG+L L+ +F W+ V +A+ + H +C ++HRDI N
Sbjct: 129 LFDFITERGALQEELARSFF-----WQ--------VLEAVRHCH-NC--GVLHRDIKDEN 172
Query: 643 VLLDLEY-EARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITE 701
+L+DL E ++ DFG+ LLK + +T+ GT Y P + Y
Sbjct: 173 ILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEW---------IRYHRYHGR 221
Query: 702 KCDVYSFGVLALEVIKGKHP 721
V+S G+L +++ G P
Sbjct: 222 SAAVWSLGILLYDMVCGDIP 241
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 29/140 (20%)
Query: 584 VYEYIN-RGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNN 642
++++I RG+L L+ +F W+ V +A+ + H +C ++HRDI N
Sbjct: 101 LFDFITERGALQEELARSFF-----WQ--------VLEAVRHCH-NC--GVLHRDIKDEN 144
Query: 643 VLLDLEY-EARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITE 701
+L+DL E ++ DFG+ LLK + +T+ GT Y P + Y
Sbjct: 145 ILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEW---------IRYHRYHGR 193
Query: 702 KCDVYSFGVLALEVIKGKHP 721
V+S G+L +++ G P
Sbjct: 194 SAAVWSLGILLYDMVCGDIP 213
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 29/140 (20%)
Query: 584 VYEYIN-RGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNN 642
++++I RG+L L+ +F W+ V +A+ + H +C ++HRDI N
Sbjct: 101 LFDFITERGALQEELARSFF-----WQ--------VLEAVRHCH-NC--GVLHRDIKDEN 144
Query: 643 VLLDLEY-EARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITE 701
+L+DL E ++ DFG+ LLK + +T+ GT Y P + Y
Sbjct: 145 ILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEW---------IRYHRYHGR 193
Query: 702 KCDVYSFGVLALEVIKGKHP 721
V+S G+L +++ G P
Sbjct: 194 SAAVWSLGILLYDMVCGDIP 213
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 29/140 (20%)
Query: 584 VYEYIN-RGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNN 642
++++I RG+L L+ +F W+ V +A+ + H +C ++HRDI N
Sbjct: 100 LFDFITERGALQEELARSFF-----WQ--------VLEAVRHCH-NC--GVLHRDIKDEN 143
Query: 643 VLLDLEY-EARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITE 701
+L+DL E ++ DFG+ LLK + +T+ GT Y P + Y
Sbjct: 144 ILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEW---------IRYHRYHGR 192
Query: 702 KCDVYSFGVLALEVIKGKHP 721
V+S G+L +++ G P
Sbjct: 193 SAAVWSLGILLYDMVCGDIP 212
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 26/136 (19%)
Query: 556 EIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDF----DWRKR 611
EI L+++ H NI+K V+ + N+G V+ + + D D R
Sbjct: 79 EIAILSRVEHANIIK------------VLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPR 126
Query: 612 MN------VITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPN 665
++ + + A+ Y+ I+HRDI N+++ ++ ++ DFG+A L+
Sbjct: 127 LDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERG 183
Query: 666 SSNWTELVGTFGYVAP 681
+T GT Y AP
Sbjct: 184 KLFYT-FCGTIEYCAP 198
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 29/140 (20%)
Query: 584 VYEYIN-RGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNN 642
++++I RG+L L+ +F W+ V +A+ + H +C ++HRDI N
Sbjct: 97 LFDFITERGALQEELARSFF-----WQ--------VLEAVRHCH-NC--GVLHRDIKDEN 140
Query: 643 VLLDLEY-EARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITE 701
+L+DL E ++ DFG+ LLK + +T+ GT Y P + Y
Sbjct: 141 ILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEW---------IRYHRYHGR 189
Query: 702 KCDVYSFGVLALEVIKGKHP 721
V+S G+L +++ G P
Sbjct: 190 SAAVWSLGILLYDMVCGDIP 209
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 29/140 (20%)
Query: 584 VYEYIN-RGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNN 642
++++I RG+L L+ +F W+ V +A+ + H +C ++HRDI N
Sbjct: 117 LFDFITERGALQEELARSFF-----WQ--------VLEAVRHCH-NC--GVLHRDIKDEN 160
Query: 643 VLLDLEY-EARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITE 701
+L+DL E ++ DFG+ LLK + +T+ GT Y P + Y
Sbjct: 161 ILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEW---------IRYHRYHGR 209
Query: 702 KCDVYSFGVLALEVIKGKHP 721
V+S G+L +++ G P
Sbjct: 210 SAAVWSLGILLYDMVCGDIP 229
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 29/140 (20%)
Query: 584 VYEYIN-RGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNN 642
++++I RG+L L+ +F W+ V +A+ + H +C ++HRDI N
Sbjct: 116 LFDFITERGALQEELARSFF-----WQ--------VLEAVRHCH-NC--GVLHRDIKDEN 159
Query: 643 VLLDLEY-EARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITE 701
+L+DL E ++ DFG+ LLK + +T+ GT Y P + Y
Sbjct: 160 ILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEW---------IRYHRYHGR 208
Query: 702 KCDVYSFGVLALEVIKGKHP 721
V+S G+L +++ G P
Sbjct: 209 SAAVWSLGILLYDMVCGDIP 228
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 29/140 (20%)
Query: 584 VYEYIN-RGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNN 642
++++I RG+L L+ +F + V +A+ + H +C ++HRDI N
Sbjct: 97 LFDFITERGALQEELARSFFWQ-------------VLEAVRHCH-NC--GVLHRDIKDEN 140
Query: 643 VLLDLEY-EARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITE 701
+L+DL E ++ DFG+ LLK + +T+ GT Y P + Y
Sbjct: 141 ILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEW---------IRYHRYHGR 189
Query: 702 KCDVYSFGVLALEVIKGKHP 721
V+S G+L +++ G P
Sbjct: 190 SAAVWSLGILLYDMVCGDIP 209
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 29/140 (20%)
Query: 584 VYEYIN-RGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNN 642
++++I RG+L L+ +F W+ V +A+ + H +C ++HRDI N
Sbjct: 116 LFDFITERGALQEELARSFF-----WQ--------VLEAVRHCH-NC--GVLHRDIKDEN 159
Query: 643 VLLDLEY-EARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITE 701
+L+DL E ++ DFG+ LLK + +T+ GT Y P + Y
Sbjct: 160 ILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEW---------IRYHRYHGR 208
Query: 702 KCDVYSFGVLALEVIKGKHP 721
V+S G+L +++ G P
Sbjct: 209 SAAVWSLGILLYDMVCGDIP 228
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 29/140 (20%)
Query: 584 VYEYIN-RGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNN 642
++++I RG+L L+ +F W+ V +A+ + H +C ++HRDI N
Sbjct: 117 LFDFITERGALQEELARSFF-----WQ--------VLEAVRHCH-NC--GVLHRDIKDEN 160
Query: 643 VLLDLEY-EARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITE 701
+L+DL E ++ DFG+ LLK + +T+ GT Y P + Y
Sbjct: 161 ILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEW---------IRYHRYHGR 209
Query: 702 KCDVYSFGVLALEVIKGKHP 721
V+S G+L +++ G P
Sbjct: 210 SAAVWSLGILLYDMVCGDIP 229
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 29/140 (20%)
Query: 584 VYEYIN-RGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNN 642
++++I RG+L L+ +F W+ V +A+ + H +C ++HRDI N
Sbjct: 117 LFDFITERGALQEELARSFF-----WQ--------VLEAVRHCH-NC--GVLHRDIKDEN 160
Query: 643 VLLDLEY-EARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITE 701
+L+DL E ++ DFG+ LLK + +T+ GT Y P + Y
Sbjct: 161 ILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEW---------IRYHRYHGR 209
Query: 702 KCDVYSFGVLALEVIKGKHP 721
V+S G+L +++ G P
Sbjct: 210 SAAVWSLGILLYDMVCGDIP 229
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 29/140 (20%)
Query: 584 VYEYIN-RGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNN 642
++++I RG+L L+ +F W+ V +A+ + H +C ++HRDI N
Sbjct: 102 LFDFITERGALQEELARSFF-----WQ--------VLEAVRHCH-NC--GVLHRDIKDEN 145
Query: 643 VLLDLEY-EARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITE 701
+L+DL E ++ DFG+ LLK + +T+ GT Y P + Y
Sbjct: 146 ILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEW---------IRYHRYHGR 194
Query: 702 KCDVYSFGVLALEVIKGKHP 721
V+S G+L +++ G P
Sbjct: 195 SAAVWSLGILLYDMVCGDIP 214
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 29/140 (20%)
Query: 584 VYEYIN-RGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNN 642
++++I RG+L L+ +F + V +A+ + H+ ++HRDI N
Sbjct: 97 LFDFITERGALQEELARSFFWQ-------------VLEAVRHCHNXG---VLHRDIKDEN 140
Query: 643 VLLDLEY-EARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITE 701
+L+DL E ++ DFG+ LLK + +T+ GT Y P + Y
Sbjct: 141 ILIDLNRGELKLIDFGSGALLK--DTVYTDFDGTRVYSPPEW---------IRYHRYHGR 189
Query: 702 KCDVYSFGVLALEVIKGKHP 721
V+S G+L +++ G P
Sbjct: 190 SAAVWSLGILLYDMVCGDIP 209
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 92/219 (42%), Gaps = 28/219 (12%)
Query: 514 IGKGEHRSVYRA-KLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFY 572
+G+G + VY+A + + +A+K+ +++ + E+ L +++HRNI++
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIR--LEHEEEGVPGTAIREVSLLKELQHRNIIELK 99
Query: 573 GFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH-HDCFP 631
H +++EY L + N D R + + + + +++ H C
Sbjct: 100 SVIHHNHRLHLIFEYAE-NDLKKYMDKN---PDVSMRVIKSFLYQLINGVNFCHSRRC-- 153
Query: 632 PIVHRDISSNNVLLDLEYEA-----RVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNI 686
+HRD+ N+LL + + ++ DFG A+ +T + T Y P
Sbjct: 154 --LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPE---- 207
Query: 687 GLHLAELAYTMKITEKCDVYSFGVLALEVIKGK--HPGD 723
+ L Y+ + D++S + E++ PGD
Sbjct: 208 -ILLGSRHYSTSV----DIWSIACIWAEMLMKTPLFPGD 241
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 83/179 (46%), Gaps = 22/179 (12%)
Query: 554 LNEIKALTKIR-HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRM 612
E++ L + + HRN+++ F ++V+E + GS +LS+ F+ +
Sbjct: 58 FREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS---ILSHIHKRRHFNELEAS 114
Query: 613 NVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYE---ARVSDFGTAKLLKPNSS-- 667
V+ VA AL ++H+ I HRD+ N+L + + ++ DF +K N
Sbjct: 115 VVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCS 171
Query: 668 --NWTELV---GTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721
+ EL+ G+ Y+AP + +E A ++CD++S GV+ ++ G P
Sbjct: 172 PISTPELLTPCGSAEYMAP---EVVEAFSEEASIYD--KRCDLWSLGVILYILLSGYPP 225
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 80/190 (42%), Gaps = 28/190 (14%)
Query: 533 IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCS------HVRHSFVVYE 586
+A+KK + PF N + K E+ + + H+NI+ + + ++V E
Sbjct: 57 VAIKKLSRPFQNQ--THAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 114
Query: 587 YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLD 646
++ +L V+ E RM+ + + L + H I+HRD+ +N+++
Sbjct: 115 LMD-ANLCQVIQMELDHE------RMSYL--LYQMLCGIKHLHSAGIIHRDLKPSNIVVK 165
Query: 647 LEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVY 706
+ ++ DFG A+ S T V T Y AP E+ M E D++
Sbjct: 166 SDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAP----------EVILGMGYKENVDLW 214
Query: 707 SFGVLALEVI 716
S G + E++
Sbjct: 215 SVGCIMGEMV 224
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 81/190 (42%), Gaps = 28/190 (14%)
Query: 533 IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCS------HVRHSFVVYE 586
+A+KK + PF N + K E+ + + H+NI+ + + ++V E
Sbjct: 52 VAIKKLSRPFQNQ--THAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109
Query: 587 YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLD 646
++ +L V+ E RM+ + + L + H I+HRD+ +N+++
Sbjct: 110 LMD-ANLCQVIQMELDHE------RMSYL--LYQMLCGIKHLHSAGIIHRDLKPSNIVVK 160
Query: 647 LEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVY 706
+ ++ DFG A+ + E+V + Y AP E+ M E D++
Sbjct: 161 SDCTLKILDFGLARTAGTSFMMEPEVVTRY-YRAP----------EVILGMGYKENVDIW 209
Query: 707 SFGVLALEVI 716
S G + E++
Sbjct: 210 SVGCIMGEMV 219
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,872,593
Number of Sequences: 62578
Number of extensions: 888325
Number of successful extensions: 4705
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 389
Number of HSP's that attempted gapping in prelim test: 2261
Number of HSP's gapped (non-prelim): 1510
length of query: 786
length of database: 14,973,337
effective HSP length: 107
effective length of query: 679
effective length of database: 8,277,491
effective search space: 5620416389
effective search space used: 5620416389
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)