Query 047901
Match_columns 786
No_of_seqs 605 out of 5584
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 07:08:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047901.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047901hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 9.3E-54 3.2E-58 509.0 30.5 418 3-425 249-743 (768)
2 4asz_A BDNF/NT-3 growth factor 100.0 9.1E-53 3.1E-57 438.1 20.5 252 506-786 13-284 (299)
3 4aoj_A High affinity nerve gro 100.0 3.6E-52 1.2E-56 439.7 23.3 252 506-786 41-314 (329)
4 4gt4_A Tyrosine-protein kinase 100.0 2.5E-52 8.5E-57 436.7 21.5 253 506-786 26-301 (308)
5 4b9d_A Serine/threonine-protei 100.0 4.7E-52 1.6E-56 438.3 20.4 251 506-784 24-276 (350)
6 3omv_A RAF proto-oncogene seri 100.0 1.1E-51 3.6E-56 429.7 22.6 254 505-786 35-295 (307)
7 4fih_A Serine/threonine-protei 100.0 4.6E-52 1.6E-56 437.7 20.0 249 506-784 74-323 (346)
8 3rgz_A Protein brassinosteroid 100.0 2.8E-50 9.7E-55 479.0 32.4 414 2-419 201-716 (768)
9 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.3E-51 4.5E-56 427.5 18.2 249 505-782 31-282 (311)
10 3t6q_A CD180 antigen; protein- 100.0 7.1E-50 2.4E-54 464.8 32.8 420 2-423 34-563 (606)
11 3hyh_A Carbon catabolite-derep 100.0 2E-50 7E-55 413.2 23.1 249 505-784 12-262 (275)
12 4fie_A Serine/threonine-protei 100.0 8.1E-51 2.8E-55 438.7 21.0 246 506-784 151-400 (423)
13 3fpq_A Serine/threonine-protei 100.0 2.1E-50 7.3E-55 416.9 21.1 248 509-784 29-282 (290)
14 4g3f_A NF-kappa-beta-inducing 100.0 1.1E-50 3.8E-55 425.9 17.2 246 506-785 58-310 (336)
15 3j0a_A TOLL-like receptor 5; m 100.0 3.3E-49 1.1E-53 474.7 32.2 418 2-424 25-564 (844)
16 3ubd_A Ribosomal protein S6 ki 100.0 9.6E-51 3.3E-55 421.4 15.9 249 506-784 24-281 (304)
17 4ase_A Vascular endothelial gr 100.0 1E-49 3.6E-54 424.2 20.4 262 498-786 56-342 (353)
18 3vq2_A TLR4, TOLL-like recepto 100.0 1.1E-48 3.9E-53 454.7 29.6 419 2-424 33-562 (606)
19 3t6q_A CD180 antigen; protein- 100.0 4.1E-48 1.4E-52 450.0 34.1 389 5-398 16-463 (606)
20 3hmm_A TGF-beta receptor type- 100.0 2.1E-49 7.1E-54 415.9 20.1 259 506-786 3-292 (303)
21 1ziw_A TOLL-like receptor 3; i 100.0 3.9E-48 1.3E-52 456.4 33.1 217 208-424 397-626 (680)
22 4g31_A Eukaryotic translation 100.0 5.6E-49 1.9E-53 410.3 21.3 251 505-784 4-279 (299)
23 4eco_A Uncharacterized protein 100.0 2.1E-48 7E-53 452.5 26.1 410 1-419 81-599 (636)
24 1ziw_A TOLL-like receptor 3; i 100.0 2.9E-46 9.9E-51 440.4 35.3 396 2-398 26-518 (680)
25 2z63_A TOLL-like receptor 4, v 100.0 5.8E-47 2E-51 437.1 27.8 417 2-423 29-534 (570)
26 4ecn_A Leucine-rich repeat pro 100.0 8.9E-47 3E-51 445.5 28.0 409 1-419 323-839 (876)
27 4eco_A Uncharacterized protein 100.0 8.5E-47 2.9E-51 438.9 25.6 388 26-420 81-579 (636)
28 3vq2_A TLR4, TOLL-like recepto 100.0 2.8E-46 9.7E-51 434.5 27.6 397 2-402 57-563 (606)
29 3j0a_A TOLL-like receptor 5; m 100.0 4.6E-46 1.6E-50 447.4 30.2 395 2-401 49-564 (844)
30 2z63_A TOLL-like receptor 4, v 100.0 1.5E-45 5.1E-50 425.4 26.4 395 2-404 53-538 (570)
31 4b99_A Mitogen-activated prote 100.0 7.5E-46 2.6E-50 401.5 21.9 260 506-784 54-344 (398)
32 2z7x_B TOLL-like receptor 1, v 100.0 1.1E-44 3.8E-49 413.0 27.5 404 4-423 3-484 (520)
33 2z81_A CD282 antigen, TOLL-lik 100.0 1.6E-45 5.4E-50 423.0 19.5 410 2-423 27-513 (549)
34 3uto_A Twitchin; kinase, muscl 100.0 1.1E-44 3.7E-49 412.1 23.8 251 506-784 157-410 (573)
35 4f9c_A Cell division cycle 7-r 100.0 5.9E-45 2E-49 390.5 20.2 200 500-724 15-249 (361)
36 3v5w_A G-protein coupled recep 100.0 1.6E-44 5.5E-49 406.4 21.5 253 505-784 188-449 (689)
37 4g8a_A TOLL-like receptor 4; l 100.0 4.1E-43 1.4E-47 410.3 30.3 419 2-424 53-584 (635)
38 3v47_A TOLL-like receptor 5B a 100.0 1E-43 3.4E-48 398.1 22.8 381 5-404 14-415 (455)
39 2z81_A CD282 antigen, TOLL-lik 100.0 3.7E-44 1.3E-48 411.6 19.6 401 6-420 10-486 (549)
40 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 2.6E-43 9E-48 405.1 26.5 404 3-423 33-513 (562)
41 3v47_A TOLL-like receptor 5B a 100.0 3.1E-43 1.1E-47 394.1 25.9 362 2-378 31-413 (455)
42 4ecn_A Leucine-rich repeat pro 100.0 1.5E-43 5E-48 418.1 22.8 391 27-426 424-870 (876)
43 3fxz_A Serine/threonine-protei 100.0 2.7E-42 9.4E-47 362.9 24.9 250 505-784 19-269 (297)
44 3uim_A Brassinosteroid insensi 100.0 1.1E-42 3.8E-47 371.5 21.5 278 494-786 18-306 (326)
45 2z7x_B TOLL-like receptor 1, v 100.0 2.2E-42 7.4E-47 394.1 25.0 379 29-421 3-458 (520)
46 3p86_A Serine/threonine-protei 100.0 2.3E-42 8E-47 365.4 21.0 255 504-786 35-293 (309)
47 3fe3_A MAP/microtubule affinit 100.0 4.1E-42 1.4E-46 366.0 22.8 249 505-784 14-264 (328)
48 3zgw_A Maternal embryonic leuc 100.0 3.5E-42 1.2E-46 368.6 21.5 249 505-784 9-260 (347)
49 3s95_A LIMK-1, LIM domain kina 100.0 1.8E-41 6.3E-46 359.4 26.7 254 505-786 9-277 (310)
50 2yab_A Death-associated protei 100.0 1.1E-41 3.8E-46 367.0 24.2 255 505-784 11-272 (361)
51 2qkw_B Protein kinase; three-h 100.0 1.3E-41 4.4E-46 362.4 23.9 266 502-786 35-310 (321)
52 1tki_A Titin; serine kinase, m 100.0 9.6E-42 3.3E-46 362.6 22.8 251 505-784 4-257 (321)
53 2c30_A Serine/threonine-protei 100.0 1.8E-41 6.3E-46 360.7 24.8 260 495-784 24-294 (321)
54 3soa_A Calcium/calmodulin-depe 100.0 1.4E-41 4.9E-46 375.7 23.8 254 505-784 10-267 (444)
55 1o6l_A RAC-beta serine/threoni 100.0 1E-41 3.4E-46 364.0 21.7 251 505-784 4-260 (337)
56 2psq_A Fibroblast growth facto 100.0 2.9E-41 1E-45 366.1 24.9 254 505-786 80-359 (370)
57 2nru_A Interleukin-1 receptor- 100.0 1.3E-40 4.3E-45 352.5 28.4 275 494-786 13-301 (307)
58 3txo_A PKC-L, NPKC-ETA, protei 100.0 7E-42 2.4E-46 367.6 18.6 252 504-784 21-280 (353)
59 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 6.2E-41 2.1E-45 385.3 27.1 383 23-421 28-487 (562)
60 3c0i_A Peripheral plasma membr 100.0 1.1E-41 3.7E-46 367.2 19.3 258 505-784 23-286 (351)
61 2y0a_A Death-associated protei 100.0 3.6E-41 1.2E-45 359.2 23.1 255 505-784 10-271 (326)
62 4dc2_A Protein kinase C IOTA t 100.0 2.4E-41 8.3E-46 367.5 21.9 259 505-784 51-318 (396)
63 2bdw_A Hypothetical protein K1 100.0 3.9E-41 1.3E-45 363.8 23.1 253 505-784 28-284 (362)
64 1o6v_A Internalin A; bacterial 100.0 1.1E-40 3.8E-45 374.0 27.5 348 24-400 44-391 (466)
65 3a62_A Ribosomal protein S6 ki 100.0 3.3E-41 1.1E-45 359.7 21.9 252 505-784 16-276 (327)
66 3kul_A Ephrin type-A receptor 100.0 5.2E-41 1.8E-45 357.9 23.4 252 505-786 48-308 (325)
67 3qd2_B Eukaryotic translation 100.0 6.6E-41 2.3E-45 358.7 23.8 251 505-784 5-325 (332)
68 3a8x_A Protein kinase C IOTA t 100.0 6.5E-41 2.2E-45 359.4 23.6 259 505-784 8-275 (345)
69 4eqm_A Protein kinase; transfe 100.0 1.9E-41 6.5E-46 356.1 19.0 255 506-785 11-269 (294)
70 4euu_A Serine/threonine-protei 100.0 8.4E-41 2.9E-45 355.7 24.0 259 506-785 9-303 (319)
71 3q4u_A Activin receptor type-1 100.0 3.9E-41 1.3E-45 355.3 20.8 253 505-786 7-297 (301)
72 3niz_A Rhodanese family protei 100.0 9.9E-41 3.4E-45 353.5 23.9 257 505-784 20-300 (311)
73 3cbl_A C-FES, proto-oncogene t 100.0 2.4E-41 8.1E-46 368.2 19.6 251 505-786 113-369 (377)
74 1o6v_A Internalin A; bacterial 100.0 2.2E-40 7.6E-45 371.5 28.1 344 2-375 47-390 (466)
75 3kn6_A Ribosomal protein S6 ki 100.0 3.3E-41 1.1E-45 359.3 20.1 250 511-784 16-270 (325)
76 1xjd_A Protein kinase C, theta 100.0 2.5E-41 8.4E-46 361.9 18.1 253 503-784 14-269 (345)
77 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.2E-40 4.1E-45 345.3 22.5 250 505-786 7-259 (268)
78 1kob_A Twitchin; kinase, intra 100.0 1.3E-40 4.3E-45 362.0 23.6 252 505-784 50-304 (387)
79 4hcu_A Tyrosine-protein kinase 100.0 6.8E-41 2.3E-45 347.3 20.5 250 505-786 9-261 (269)
80 2qol_A Ephrin receptor; recept 100.0 8.3E-41 2.9E-45 362.8 22.0 252 505-786 44-304 (373)
81 1fot_A TPK1 delta, CAMP-depend 100.0 1.2E-40 4E-45 353.2 21.8 248 505-784 5-258 (318)
82 3soc_A Activin receptor type-2 100.0 3.8E-41 1.3E-45 358.6 17.8 262 505-786 23-313 (322)
83 4g8a_A TOLL-like receptor 4; l 100.0 4.5E-40 1.5E-44 384.6 28.2 395 2-399 77-582 (635)
84 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.4E-40 4.8E-45 357.3 21.3 247 506-784 41-293 (350)
85 2x4f_A Myosin light chain kina 100.0 1.6E-40 5.6E-45 360.3 21.7 248 509-784 92-342 (373)
86 3h4j_B AMPK kdaid, SNF1-like p 100.0 3.5E-41 1.2E-45 359.4 16.1 249 505-784 8-258 (336)
87 2zv2_A Calcium/calmodulin-depe 100.0 9.8E-41 3.4E-45 351.6 19.3 253 505-784 12-292 (298)
88 2i0e_A Protein kinase C-beta I 100.0 8.9E-41 3E-45 358.8 19.2 252 504-784 18-276 (353)
89 2qr7_A Ribosomal protein S6 ki 100.0 1E-40 3.5E-45 357.4 19.6 251 505-784 21-277 (342)
90 3tki_A Serine/threonine-protei 100.0 1.8E-40 6E-45 353.3 21.2 252 505-784 6-261 (323)
91 2w4o_A Calcium/calmodulin-depe 100.0 1.5E-40 5E-45 357.8 20.5 250 505-784 52-305 (349)
92 4fr4_A YANK1, serine/threonine 100.0 1.9E-40 6.4E-45 359.3 21.3 256 505-784 14-271 (384)
93 1ob3_A PFPK5, cell division co 100.0 9.4E-41 3.2E-45 349.9 18.2 261 506-784 2-280 (288)
94 3ugc_A Tyrosine-protein kinase 100.0 7.7E-41 2.6E-45 351.9 17.4 259 505-786 9-286 (295)
95 3dtc_A Mitogen-activated prote 100.0 2.5E-40 8.6E-45 343.4 20.8 253 505-786 6-268 (271)
96 3lb7_A RAF proto-oncogene seri 100.0 3.7E-40 1.3E-44 348.3 22.4 254 505-786 35-295 (307)
97 2a2a_A Death-associated protei 100.0 4.7E-40 1.6E-44 350.2 23.3 255 505-784 11-272 (321)
98 1luf_A Muscle-specific tyrosin 100.0 2.4E-40 8.1E-45 356.2 21.1 255 504-786 45-330 (343)
99 3f3z_A Calcium/calmodulin-depe 100.0 4E-40 1.4E-44 343.1 22.0 250 505-784 8-261 (277)
100 3l9p_A Anaplastic lymphoma kin 100.0 2.1E-40 7.2E-45 359.2 20.3 254 505-786 70-340 (367)
101 2izr_A Casein kinase I isoform 100.0 8E-41 2.7E-45 357.7 16.6 254 506-786 9-276 (330)
102 3o0g_A Cell division protein k 100.0 3.5E-40 1.2E-44 346.4 21.1 254 506-784 2-282 (292)
103 3vhe_A Vascular endothelial gr 100.0 1.6E-40 5.5E-45 359.9 19.0 262 498-786 14-350 (359)
104 2pmi_A Negative RE, cyclin-dep 100.0 2.8E-40 9.4E-45 351.2 20.4 263 505-784 4-293 (317)
105 3gen_A Tyrosine-protein kinase 100.0 3.4E-40 1.2E-44 344.8 20.7 250 505-786 23-275 (283)
106 1qcf_A Haematopoetic cell kina 100.0 1.4E-40 4.7E-45 371.1 18.7 250 505-786 187-439 (454)
107 3tt0_A Basic fibroblast growth 100.0 5.6E-40 1.9E-44 358.2 23.0 254 505-786 68-347 (382)
108 2eue_A Carbon catabolite derep 100.0 5.5E-40 1.9E-44 341.7 21.7 248 506-784 13-262 (275)
109 3kk8_A Calcium/calmodulin depe 100.0 6.6E-40 2.3E-44 342.8 22.4 253 505-784 5-261 (284)
110 2y94_A 5'-AMP-activated protei 100.0 3.9E-40 1.3E-44 366.5 21.7 249 506-784 16-266 (476)
111 2rku_A Serine/threonine-protei 100.0 9.2E-40 3.1E-44 343.5 23.3 251 505-784 14-265 (294)
112 2r5t_A Serine/threonine-protei 100.0 1.3E-40 4.3E-45 360.1 17.2 247 505-780 37-285 (373)
113 1opk_A P150, C-ABL, proto-onco 100.0 3.6E-40 1.2E-44 371.2 21.4 250 505-786 219-473 (495)
114 3cok_A Serine/threonine-protei 100.0 3E-40 1E-44 344.3 19.1 252 505-784 10-262 (278)
115 1k9a_A Carboxyl-terminal SRC k 100.0 5.9E-40 2E-44 365.4 22.7 246 505-786 192-440 (450)
116 2ivs_A Proto-oncogene tyrosine 100.0 9.1E-40 3.1E-44 347.0 23.1 254 505-786 22-306 (314)
117 4ejn_A RAC-alpha serine/threon 100.0 1.4E-40 4.9E-45 370.5 17.5 251 505-784 147-404 (446)
118 3ork_A Serine/threonine protei 100.0 8.3E-41 2.9E-45 354.4 14.5 255 505-784 11-273 (311)
119 3gni_B Strad alpha; kinase fol 100.0 4.6E-40 1.6E-44 360.1 20.7 264 505-784 24-333 (389)
120 3hko_A Calcium/calmodulin-depe 100.0 2.7E-40 9.2E-45 356.1 18.5 261 503-784 23-330 (345)
121 3poz_A Epidermal growth factor 100.0 5.3E-40 1.8E-44 350.6 20.5 250 505-786 14-273 (327)
122 2owb_A Serine/threonine-protei 100.0 1.1E-39 3.7E-44 349.5 22.9 251 505-784 40-291 (335)
123 3v8s_A RHO-associated protein 100.0 4.3E-41 1.5E-45 367.7 12.0 256 501-784 64-329 (410)
124 4f0f_A Serine/threonine-protei 100.0 1.8E-39 6E-44 340.1 23.8 254 505-786 18-284 (287)
125 2id5_A Lingo-1, leucine rich r 100.0 1.2E-39 4.3E-44 367.0 24.3 320 52-374 13-334 (477)
126 2id5_A Lingo-1, leucine rich r 100.0 2.8E-39 9.6E-44 364.1 27.1 317 5-325 15-333 (477)
127 1mp8_A Focal adhesion kinase 1 100.0 1E-39 3.6E-44 340.7 21.6 251 505-786 14-271 (281)
128 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 3.7E-40 1.3E-44 367.2 19.2 250 505-786 183-435 (452)
129 3bz5_A Internalin-J, INLJ; leu 100.0 4.4E-39 1.5E-43 358.1 27.8 342 21-403 37-393 (457)
130 3fdn_A Serine/threonine-protei 100.0 6.1E-40 2.1E-44 342.1 19.5 249 505-784 8-257 (279)
131 2eva_A TAK1 kinase - TAB1 chim 100.0 7.6E-40 2.6E-44 346.1 20.4 250 505-786 7-258 (307)
132 3qup_A Tyrosine-protein kinase 100.0 1E-39 3.4E-44 348.2 21.2 255 505-786 22-293 (323)
133 3bhy_A Death-associated protei 100.0 1.6E-39 5.4E-44 339.7 22.2 254 506-784 5-265 (283)
134 3uc3_A Serine/threonine-protei 100.0 1.3E-39 4.6E-44 351.9 22.3 252 505-784 19-274 (361)
135 3dls_A PAS domain-containing s 100.0 8.5E-40 2.9E-44 349.8 20.5 246 504-784 22-274 (335)
136 2ac3_A MAP kinase-interacting 100.0 1.4E-39 4.7E-44 346.0 22.0 259 506-784 12-295 (316)
137 3llt_A Serine/threonine kinase 100.0 2.2E-39 7.5E-44 351.1 23.8 199 504-725 33-262 (360)
138 3p1a_A MYT1 kinase, membrane-a 100.0 1.4E-39 4.9E-44 344.7 21.8 246 506-784 57-304 (311)
139 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.1E-39 3.7E-44 366.9 22.0 258 505-784 184-448 (543)
140 4agu_A Cyclin-dependent kinase 100.0 1.9E-39 6.5E-44 344.0 22.7 261 506-784 3-284 (311)
141 2y7j_A Phosphorylase B kinase 100.0 3.1E-39 1.1E-43 349.7 24.7 261 499-784 87-359 (365)
142 3gxj_A TGF-beta receptor type- 100.0 3.5E-41 1.2E-45 355.9 9.1 253 506-786 3-292 (303)
143 3kfa_A Tyrosine-protein kinase 100.0 3.8E-40 1.3E-44 345.3 16.8 252 504-786 11-266 (288)
144 4e5w_A Tyrosine-protein kinase 100.0 1E-39 3.4E-44 344.7 20.0 259 506-786 21-297 (302)
145 1rjb_A FL cytokine receptor; k 100.0 1.3E-39 4.5E-44 350.5 21.3 255 504-786 43-329 (344)
146 2pvf_A Fibroblast growth facto 100.0 2.3E-39 7.9E-44 346.9 23.1 254 505-786 34-313 (334)
147 4eut_A Serine/threonine-protei 100.0 7E-40 2.4E-44 359.1 19.4 260 505-785 8-303 (396)
148 1nxk_A MAP kinase-activated pr 100.0 7.7E-40 2.6E-44 358.4 19.5 251 506-784 61-321 (400)
149 4aw2_A Serine/threonine-protei 100.0 1.1E-40 3.8E-45 367.2 12.9 261 499-784 67-338 (437)
150 2i1m_A Macrophage colony-stimu 100.0 3.4E-40 1.2E-44 353.4 16.3 255 504-786 44-321 (333)
151 3t9t_A Tyrosine-protein kinase 100.0 1.2E-39 4.2E-44 337.4 19.9 250 505-786 7-259 (267)
152 1t46_A HOMO sapiens V-KIT hard 100.0 1.9E-39 6.4E-44 344.4 21.7 254 505-786 22-302 (313)
153 3dbq_A Dual specificity protei 100.0 2.1E-39 7.3E-44 348.4 22.3 249 505-784 8-273 (343)
154 3kmu_A ILK, integrin-linked ki 100.0 1.9E-39 6.6E-44 336.6 21.1 248 505-786 9-265 (271)
155 3c1x_A Hepatocyte growth facto 100.0 1.1E-39 3.7E-44 353.6 19.7 251 506-786 89-350 (373)
156 2acx_A G protein-coupled recep 100.0 1.2E-39 4.3E-44 366.9 20.7 256 505-784 183-444 (576)
157 3mdy_A Bone morphogenetic prot 100.0 4.3E-39 1.5E-43 345.4 24.0 258 503-786 34-326 (337)
158 2clq_A Mitogen-activated prote 100.0 5.4E-39 1.8E-43 337.8 24.2 252 507-784 23-278 (295)
159 3g33_A Cell division protein k 100.0 1.8E-39 6.2E-44 343.7 20.2 256 505-784 8-296 (308)
160 1u5q_A Serine/threonine protei 100.0 2.4E-39 8.2E-44 347.8 21.3 247 506-784 54-305 (348)
161 2vd5_A DMPK protein; serine/th 100.0 2.6E-40 9E-45 361.6 14.0 260 499-784 54-327 (412)
162 3is5_A Calcium-dependent prote 100.0 1.2E-39 3.9E-44 341.0 18.2 252 506-784 22-278 (285)
163 3kex_A Receptor tyrosine-prote 100.0 8E-40 2.7E-44 349.0 17.3 250 506-786 13-271 (325)
164 1csn_A Casein kinase-1; phosph 100.0 1E-39 3.6E-44 343.8 18.0 255 505-786 9-278 (298)
165 1mqb_A Ephrin type-A receptor 100.0 3.8E-39 1.3E-43 344.8 22.6 251 506-786 44-304 (333)
166 3mtl_A Cell division protein k 100.0 4.2E-40 1.4E-44 350.9 14.9 260 506-784 2-281 (324)
167 2h34_A Serine/threonine-protei 100.0 1.1E-39 3.6E-44 345.4 17.7 257 504-786 32-291 (309)
168 3lm5_A Serine/threonine-protei 100.0 1.5E-39 5.1E-44 347.2 18.9 260 500-784 22-287 (327)
169 3nyv_A Calmodulin-domain prote 100.0 1.7E-39 6E-44 366.0 20.5 253 505-784 25-281 (484)
170 2zmd_A Dual specificity protei 100.0 3.2E-39 1.1E-43 352.5 22.0 248 506-784 56-320 (390)
171 2w5a_A Serine/threonine-protei 100.0 1.1E-39 3.7E-44 340.2 17.3 254 505-785 5-268 (279)
172 2wqm_A Serine/threonine-protei 100.0 2E-39 6.9E-44 343.7 19.5 260 505-786 31-292 (310)
173 3q5i_A Protein kinase; CDPK, m 100.0 4.2E-39 1.4E-43 364.3 23.3 254 505-784 35-301 (504)
174 2jam_A Calcium/calmodulin-depe 100.0 2E-39 7E-44 342.6 19.4 250 505-784 8-261 (304)
175 3a7i_A MST3 kinase, serine/thr 100.0 8.7E-39 3E-43 337.6 24.2 248 505-784 21-270 (303)
176 2vgo_A Serine/threonine-protei 100.0 3.2E-39 1.1E-43 337.5 20.5 249 505-784 13-262 (284)
177 3lij_A Calcium/calmodulin depe 100.0 3.9E-39 1.3E-43 363.6 22.7 252 505-784 36-291 (494)
178 4fvq_A Tyrosine-protein kinase 100.0 6.7E-40 2.3E-44 343.7 15.2 246 505-786 7-270 (289)
179 1u59_A Tyrosine-protein kinase 100.0 7.8E-39 2.7E-43 335.1 23.0 250 506-786 9-267 (287)
180 1p4o_A Insulin-like growth fac 100.0 1.7E-39 5.7E-44 346.3 18.2 257 502-786 21-294 (322)
181 4aaa_A Cyclin-dependent kinase 100.0 2.1E-39 7.2E-44 346.8 19.0 262 505-784 24-306 (331)
182 3lzb_A Epidermal growth factor 100.0 3.7E-39 1.3E-43 343.9 20.8 250 505-786 14-273 (327)
183 1qpc_A LCK kinase; alpha beta 100.0 3.5E-39 1.2E-43 336.4 20.0 250 505-786 12-264 (279)
184 3og7_A AKAP9-BRAF fusion prote 100.0 2.2E-39 7.4E-44 339.7 18.5 254 505-786 23-283 (289)
185 3lxl_A Tyrosine-protein kinase 100.0 3.3E-39 1.1E-43 344.7 20.1 259 505-786 22-298 (327)
186 3f66_A Hepatocyte growth facto 100.0 8.8E-39 3E-43 336.8 22.7 252 505-786 24-286 (298)
187 3oz6_A Mitogen-activated prote 100.0 3.4E-39 1.2E-43 353.0 20.3 203 504-726 7-235 (388)
188 1ua2_A CAK, cell division prot 100.0 2.3E-39 7.7E-44 348.6 18.5 258 503-784 7-291 (346)
189 3cc6_A Protein tyrosine kinase 100.0 7.1E-39 2.4E-43 334.4 21.8 251 505-786 11-268 (281)
190 1jl5_A Outer protein YOPM; leu 100.0 5.5E-39 1.9E-43 357.0 22.1 346 2-398 12-371 (454)
191 3i6u_A CDS1, serine/threonine- 100.0 1.9E-39 6.5E-44 357.8 18.0 259 504-784 133-399 (419)
192 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.5E-39 5.2E-44 347.4 16.6 262 504-784 32-318 (329)
193 1b6c_B TGF-B superfamily recep 100.0 8.5E-39 2.9E-43 343.9 22.6 257 502-786 38-331 (342)
194 3op5_A Serine/threonine-protei 100.0 7.9E-40 2.7E-44 354.8 14.5 261 505-786 34-324 (364)
195 3lxp_A Non-receptor tyrosine-p 100.0 6.7E-39 2.3E-43 340.8 21.4 255 508-786 33-305 (318)
196 3mwu_A Calmodulin-domain prote 100.0 3.2E-39 1.1E-43 363.7 19.9 252 505-784 21-276 (486)
197 3ttj_A Mitogen-activated prote 100.0 5.8E-39 2E-43 357.8 21.5 258 505-784 61-355 (464)
198 2yex_A Serine/threonine-protei 100.0 7.2E-39 2.5E-43 333.4 20.7 252 505-784 6-261 (276)
199 3com_A Serine/threonine-protei 100.0 6.7E-39 2.3E-43 340.4 20.8 250 505-784 28-278 (314)
200 3pls_A Macrophage-stimulating 100.0 1.1E-38 3.7E-43 336.0 22.3 250 507-786 22-282 (298)
201 1vzo_A Ribosomal protein S6 ki 100.0 1.6E-39 5.4E-44 350.8 16.0 256 505-784 53-321 (355)
202 2h8h_A Proto-oncogene tyrosine 100.0 1.6E-39 5.6E-44 369.3 16.6 250 505-786 266-518 (535)
203 3pfq_A PKC-B, PKC-beta, protei 100.0 5E-39 1.7E-43 373.8 21.0 252 504-784 339-597 (674)
204 2xir_A Vascular endothelial gr 100.0 6.1E-39 2.1E-43 341.0 19.9 261 499-786 20-305 (316)
205 4hgt_A Casein kinase I isoform 100.0 5.5E-39 1.9E-43 337.9 19.2 255 505-786 8-275 (296)
206 2ozo_A Tyrosine-protein kinase 100.0 8E-39 2.7E-43 368.7 22.2 249 507-786 336-593 (613)
207 3brb_A Proto-oncogene tyrosine 100.0 1.2E-38 4.1E-43 338.2 21.8 256 504-786 32-303 (313)
208 3rp9_A Mitogen-activated prote 100.0 7E-39 2.4E-43 358.5 21.0 194 506-718 53-280 (458)
209 1x8b_A WEE1HU, WEE1-like prote 100.0 1.3E-38 4.3E-43 333.7 21.6 246 505-784 10-279 (289)
210 1xbb_A Tyrosine-protein kinase 100.0 1.5E-38 5E-43 333.8 21.7 251 505-786 15-274 (291)
211 2yfx_A Tyrosine-protein kinase 100.0 1E-38 3.5E-43 340.9 20.8 254 505-786 29-299 (327)
212 1phk_A Phosphorylase kinase; g 100.0 2.2E-38 7.5E-43 333.7 23.0 255 505-784 16-283 (298)
213 2h6d_A 5'-AMP-activated protei 100.0 6.3E-39 2.2E-43 333.8 18.6 249 506-784 11-261 (276)
214 2j7t_A Serine/threonine-protei 100.0 3E-39 1E-43 341.1 16.3 252 505-784 18-275 (302)
215 3mi9_A Cell division protein k 100.0 1.6E-38 5.3E-43 343.1 22.1 262 505-784 16-311 (351)
216 2wtk_C Serine/threonine-protei 100.0 1.7E-38 5.9E-43 335.7 21.9 253 505-784 4-263 (305)
217 1fvr_A Tyrosine-protein kinase 100.0 1.2E-38 4E-43 340.5 20.7 252 506-786 25-295 (327)
218 3uzp_A CKI-delta, CKID, casein 100.0 8E-39 2.7E-43 336.7 19.2 255 505-786 8-275 (296)
219 1cm8_A Phosphorylated MAP kina 100.0 1.5E-38 5.3E-43 344.3 21.7 257 505-784 24-307 (367)
220 2ycf_A Serine/threonine-protei 100.0 7E-39 2.4E-43 341.4 18.7 255 505-784 9-274 (322)
221 3byv_A Rhoptry kinase; malaria 100.0 1.7E-39 6E-44 353.8 13.7 245 505-784 72-359 (377)
222 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.2E-38 4E-43 345.9 20.0 245 505-785 64-333 (365)
223 1t4h_A Serine/threonine-protei 100.0 2.1E-38 7.1E-43 332.5 21.1 248 507-784 27-282 (290)
224 1byg_A CSK, protein (C-termina 100.0 7.6E-39 2.6E-43 333.6 17.6 246 505-786 20-268 (278)
225 3n9x_A Phosphotransferase; mal 100.0 1.6E-38 5.5E-43 352.1 21.2 200 505-723 25-253 (432)
226 2r3i_A Cell division protein k 100.0 1.2E-38 4E-43 336.0 19.0 262 506-784 3-283 (299)
227 3g2f_A Bone morphogenetic prot 100.0 8.2E-39 2.8E-43 343.1 18.0 260 505-786 12-313 (336)
228 2v62_A Serine/threonine-protei 100.0 3.2E-39 1.1E-43 347.3 14.8 259 505-786 36-323 (345)
229 2w1i_A JAK2; chromosomal rearr 100.0 1.2E-38 4E-43 340.2 18.8 259 505-786 40-317 (326)
230 3eqc_A Dual specificity mitoge 100.0 8.6E-39 2.9E-43 346.3 17.6 257 505-784 32-324 (360)
231 3kvw_A DYRK2, dual specificity 100.0 3E-38 1E-42 349.1 21.8 198 505-725 96-302 (429)
232 2x7f_A TRAF2 and NCK-interacti 100.0 9.1E-39 3.1E-43 341.2 16.7 252 504-784 22-286 (326)
233 2xrw_A Mitogen-activated prote 100.0 6.9E-38 2.4E-42 340.2 23.7 258 505-784 24-318 (371)
234 2vwi_A Serine/threonine-protei 100.0 1.4E-38 4.7E-43 336.1 17.7 257 504-784 13-287 (303)
235 2a19_B Interferon-induced, dou 100.0 2.3E-38 7.8E-43 331.0 19.1 243 505-786 10-269 (284)
236 3bz5_A Internalin-J, INLJ; leu 100.0 1.4E-37 4.8E-42 346.0 26.3 333 3-377 44-391 (457)
237 4fl3_A Tyrosine-protein kinase 100.0 2.3E-38 7.9E-43 365.6 20.7 244 512-786 375-626 (635)
238 3q60_A ROP5B; pseudokinase, tr 100.0 4.9E-39 1.7E-43 349.5 14.1 257 505-784 61-352 (371)
239 2buj_A Serine/threonine-protei 100.0 1.5E-38 5.2E-43 338.1 17.3 259 505-786 28-301 (317)
240 1u46_A ACK-1, activated CDC42 100.0 3E-38 1E-42 331.4 19.1 253 505-786 17-279 (291)
241 2pml_X PFPK7, Ser/Thr protein 100.0 2.2E-38 7.5E-43 341.6 18.4 256 505-784 30-322 (348)
242 3ll6_A Cyclin G-associated kin 100.0 1.8E-38 6.3E-43 340.5 17.3 253 505-786 27-303 (337)
243 1zy4_A Serine/threonine-protei 100.0 3.6E-38 1.2E-42 332.8 19.2 250 505-784 5-283 (303)
244 2jii_A Serine/threonine-protei 100.0 2.6E-39 9E-44 349.1 10.7 254 506-786 42-331 (352)
245 2wei_A Calmodulin-domain prote 100.0 5.2E-38 1.8E-42 328.9 19.5 253 504-784 20-276 (287)
246 3pg1_A Mitogen-activated prote 100.0 4.8E-38 1.6E-42 340.8 19.4 271 497-784 13-316 (362)
247 4e7w_A Glycogen synthase kinas 100.0 3.9E-38 1.3E-42 344.6 18.7 258 505-784 39-321 (394)
248 3qyz_A Mitogen-activated prote 100.0 7.8E-38 2.7E-42 339.1 20.8 259 505-784 26-313 (364)
249 2fst_X Mitogen-activated prote 100.0 3E-38 1E-42 341.7 17.2 257 505-784 28-311 (367)
250 3nsz_A CK II alpha, casein kin 100.0 2.3E-37 7.8E-42 331.0 23.6 253 505-784 35-319 (330)
251 1wak_A Serine/threonine-protei 100.0 7.6E-38 2.6E-42 343.8 20.0 256 505-784 36-391 (397)
252 2i6l_A Mitogen-activated prote 100.0 9.8E-38 3.4E-42 332.2 20.2 258 505-784 10-305 (320)
253 3o6n_A APL1; leucine-rich repe 100.0 4.4E-37 1.5E-41 336.7 25.7 309 25-374 44-353 (390)
254 1z57_A Dual specificity protei 100.0 2.1E-37 7.3E-42 332.4 22.4 252 505-784 13-328 (339)
255 3e3p_A Protein kinase, putativ 100.0 1.1E-37 3.9E-42 337.6 19.6 266 499-784 16-314 (360)
256 3eb0_A Putative uncharacterize 100.0 1.4E-37 4.8E-42 339.4 20.2 259 503-784 4-321 (383)
257 2b9h_A MAP kinase FUS3, mitoge 100.0 1.4E-37 4.9E-42 335.9 20.0 259 505-784 10-305 (353)
258 3sv0_A Casein kinase I-like; t 100.0 1.2E-37 4.1E-42 347.1 19.9 255 505-786 6-273 (483)
259 3an0_A Dual specificity mitoge 100.0 5.7E-38 1.9E-42 337.1 16.8 253 505-784 50-310 (340)
260 3fme_A Dual specificity mitoge 100.0 1.4E-37 4.8E-42 326.1 19.1 254 505-784 6-266 (290)
261 2j0j_A Focal adhesion kinase 1 100.0 2.1E-37 7.3E-42 359.0 22.3 252 504-786 388-646 (656)
262 4exu_A Mitogen-activated prote 100.0 1.5E-37 5.1E-42 337.6 19.7 256 505-784 41-323 (371)
263 3fhr_A MAP kinase-activated pr 100.0 1.5E-37 5.1E-42 332.8 19.4 251 505-784 27-287 (336)
264 3cek_A Dual specificity protei 100.0 3.3E-37 1.1E-41 327.1 21.8 249 505-784 27-292 (313)
265 3rgf_A Cyclin-dependent kinase 100.0 2.6E-38 8.8E-43 348.0 13.7 199 506-724 20-238 (405)
266 1blx_A Cyclin-dependent kinase 100.0 1.6E-37 5.3E-42 331.7 18.7 255 504-784 9-296 (326)
267 4fmz_A Internalin; leucine ric 100.0 9.5E-37 3.3E-41 328.6 24.9 307 22-373 40-346 (347)
268 4fmz_A Internalin; leucine ric 100.0 1.1E-36 3.8E-41 328.1 25.3 307 46-397 40-346 (347)
269 2rio_A Serine/threonine-protei 100.0 2.2E-37 7.6E-42 342.9 20.0 247 507-784 16-295 (434)
270 2vx3_A Dual specificity tyrosi 100.0 6.5E-37 2.2E-41 334.1 22.8 200 505-725 53-261 (382)
271 1j1b_A Glycogen synthase kinas 100.0 2.5E-37 8.5E-42 341.0 19.4 256 506-784 54-336 (420)
272 3a99_A Proto-oncogene serine/t 100.0 1.4E-37 4.9E-42 330.8 16.1 245 504-784 41-293 (320)
273 1jl5_A Outer protein YOPM; leu 100.0 1E-35 3.6E-40 330.6 31.6 352 2-402 35-416 (454)
274 2iwi_A Serine/threonine-protei 100.0 3E-37 1E-41 327.3 18.0 246 503-784 28-283 (312)
275 3o6n_A APL1; leucine-rich repe 100.0 1.2E-36 4.1E-41 333.2 23.0 305 2-324 46-351 (390)
276 3coi_A Mitogen-activated prote 100.0 5.7E-37 1.9E-41 331.0 20.1 255 506-784 24-305 (353)
277 2y4i_B KSR2, HKSR2, kinase sup 100.0 7.7E-38 2.6E-42 333.0 12.5 252 505-786 32-297 (319)
278 2eu9_A Dual specificity protei 100.0 9.7E-37 3.3E-41 329.6 21.2 252 505-784 18-333 (355)
279 3oja_B Anopheles plasmodium-re 100.0 3.2E-36 1.1E-40 348.1 26.5 310 25-375 50-360 (597)
280 1q8y_A SR protein kinase; tran 100.0 7E-37 2.4E-41 333.2 19.8 252 505-784 18-333 (373)
281 3p23_A Serine/threonine-protei 100.0 3.2E-37 1.1E-41 340.6 16.8 251 505-784 23-283 (432)
282 3qa8_A MGC80376 protein; kinas 100.0 1.4E-37 4.8E-42 353.3 14.2 262 505-783 13-296 (676)
283 3aln_A Dual specificity mitoge 100.0 3.6E-37 1.2E-41 329.0 16.2 260 505-784 21-285 (327)
284 2dyl_A Dual specificity mitoge 100.0 1.2E-36 4E-41 323.6 18.1 252 505-784 24-283 (318)
285 3uqc_A Probable conserved tran 100.0 1.6E-36 5.3E-41 316.7 16.8 229 506-786 31-260 (286)
286 1xku_A Decorin; proteoglycan, 100.0 5.7E-35 1.9E-39 312.2 28.8 294 3-323 33-330 (330)
287 2ft3_A Biglycan; proteoglycan, 100.0 2.2E-35 7.7E-40 315.6 25.0 286 27-323 34-331 (332)
288 3m2w_A MAP kinase-activated pr 100.0 5.8E-36 2E-40 315.2 19.0 230 506-784 17-256 (299)
289 3oja_B Anopheles plasmodium-re 100.0 1.9E-35 6.5E-40 341.5 24.4 346 48-437 49-395 (597)
290 2ft3_A Biglycan; proteoglycan, 100.0 1.2E-34 4.2E-39 309.9 24.2 287 51-395 34-331 (332)
291 2pzi_A Probable serine/threoni 100.0 2.1E-35 7.3E-40 345.8 18.7 233 506-783 80-319 (681)
292 1xku_A Decorin; proteoglycan, 100.0 5.5E-34 1.9E-38 304.6 25.7 291 26-347 31-330 (330)
293 3dzo_A Rhoptry kinase domain; 100.0 4.1E-35 1.4E-39 322.6 15.7 245 505-784 77-363 (413)
294 2vuw_A Serine/threonine-protei 100.0 1.8E-35 6.1E-40 317.0 10.1 243 505-783 19-329 (336)
295 1ogq_A PGIP-2, polygalacturona 100.0 2E-33 6.7E-38 297.4 18.4 247 26-275 50-302 (313)
296 1z7x_W Ribonuclease inhibitor; 100.0 6.1E-37 2.1E-41 343.6 -10.2 155 3-157 5-182 (461)
297 1z7x_W Ribonuclease inhibitor; 100.0 2.4E-36 8.2E-41 338.8 -6.6 374 25-398 2-441 (461)
298 1ogq_A PGIP-2, polygalacturona 100.0 3.6E-33 1.2E-37 295.4 14.5 253 168-424 50-306 (313)
299 2z66_A Variable lymphocyte rec 100.0 1.9E-31 6.4E-36 281.7 18.2 278 53-357 10-295 (306)
300 2z66_A Variable lymphocyte rec 100.0 2.4E-31 8.1E-36 281.0 18.9 246 4-253 10-261 (306)
301 2z80_A TOLL-like receptor 2, v 100.0 2.5E-31 8.4E-36 286.8 17.5 189 188-376 120-317 (353)
302 3zyi_A Leucine-rich repeat-con 100.0 4.1E-30 1.4E-34 286.8 25.7 245 28-277 56-303 (452)
303 2z80_A TOLL-like receptor 2, v 100.0 2.7E-31 9.2E-36 286.5 15.4 280 96-401 30-318 (353)
304 3zyj_A Leucine-rich repeat-con 100.0 5.4E-30 1.8E-34 284.9 25.7 245 28-277 45-292 (440)
305 3zyi_A Leucine-rich repeat-con 100.0 3.9E-30 1.3E-34 287.1 21.5 248 147-398 56-304 (452)
306 3zyj_A Leucine-rich repeat-con 100.0 3.5E-30 1.2E-34 286.4 20.5 248 147-398 45-293 (440)
307 1ozn_A Reticulon 4 receptor; N 100.0 8.1E-30 2.8E-34 266.2 20.9 170 187-357 100-269 (285)
308 1ozn_A Reticulon 4 receptor; N 100.0 2.1E-29 7.2E-34 263.1 20.8 235 26-285 32-269 (285)
309 3g06_A SSPH2 (leucine-rich rep 100.0 5E-29 1.7E-33 285.0 24.2 94 27-134 41-134 (622)
310 3g06_A SSPH2 (leucine-rich rep 100.0 9.6E-29 3.3E-33 282.7 26.3 248 74-360 61-308 (622)
311 3o53_A Protein LRIM1, AGAP0063 100.0 7.1E-31 2.4E-35 278.5 7.7 256 3-272 12-270 (317)
312 4fcg_A Uncharacterized protein 100.0 3.3E-29 1.1E-33 266.5 17.7 234 26-277 81-314 (328)
313 3o53_A Protein LRIM1, AGAP0063 100.0 1.4E-30 4.7E-35 276.3 5.3 264 78-401 14-280 (317)
314 4fcg_A Uncharacterized protein 100.0 7.3E-29 2.5E-33 263.8 17.8 240 48-305 79-318 (328)
315 1wwl_A Monocyte differentiatio 100.0 4.4E-30 1.5E-34 271.7 5.8 252 115-398 37-310 (312)
316 1wwl_A Monocyte differentiatio 100.0 6.3E-30 2.2E-34 270.5 4.1 247 23-302 40-310 (312)
317 4azs_A Methyltransferase WBDD; 100.0 8.7E-30 3E-34 289.6 5.4 188 514-721 242-437 (569)
318 3ogk_B Coronatine-insensitive 100.0 1.7E-30 6E-35 300.7 -2.2 372 24-398 110-527 (592)
319 3oja_A Leucine-rich immune mol 100.0 1.4E-28 4.9E-33 275.9 11.4 237 24-296 32-270 (487)
320 3ogk_B Coronatine-insensitive 99.9 3.9E-30 1.3E-34 297.8 -4.8 390 2-394 113-548 (592)
321 3oja_A Leucine-rich immune mol 99.9 2E-28 7E-33 274.6 8.4 235 50-344 34-270 (487)
322 2z62_A TOLL-like receptor 4, v 99.9 7.2E-27 2.4E-31 242.6 19.2 209 193-402 29-242 (276)
323 2z62_A TOLL-like receptor 4, v 99.9 8.7E-27 3E-31 242.0 18.0 225 150-377 12-241 (276)
324 2p1m_B Transport inhibitor res 99.9 2.5E-29 8.5E-34 291.2 -7.5 369 23-396 102-518 (594)
325 2o6q_A Variable lymphocyte rec 99.9 1.4E-25 4.9E-30 231.9 19.6 201 169-372 17-217 (270)
326 2o6q_A Variable lymphocyte rec 99.9 1.8E-25 6E-30 231.2 19.9 204 146-351 17-220 (270)
327 1p9a_G Platelet glycoprotein I 99.9 2.7E-25 9.2E-30 231.8 20.1 203 70-301 6-208 (290)
328 1p9a_G Platelet glycoprotein I 99.9 6.3E-25 2.2E-29 229.0 20.9 203 21-252 5-207 (290)
329 3rfs_A Internalin B, repeat mo 99.9 8.9E-26 3E-30 233.6 13.6 207 166-383 39-245 (272)
330 3rfs_A Internalin B, repeat mo 99.9 1.1E-25 3.6E-30 233.0 13.8 228 122-361 20-247 (272)
331 2p1m_B Transport inhibitor res 99.9 2.9E-28 9.9E-33 282.2 -6.9 391 2-396 106-543 (594)
332 2xwt_C Thyrotropin receptor; s 99.9 4.1E-25 1.4E-29 224.0 13.5 199 169-394 32-236 (239)
333 3en9_A Glycoprotease, O-sialog 99.9 1.2E-25 4.2E-30 254.1 10.2 187 509-722 339-538 (540)
334 2xwt_C Thyrotropin receptor; s 99.9 1.6E-24 5.3E-29 219.8 15.1 193 192-413 31-232 (239)
335 4ay9_X Follicle-stimulating ho 99.9 3.7E-24 1.3E-28 230.0 16.4 242 148-396 12-258 (350)
336 3goz_A Leucine-rich repeat-con 99.9 1.1E-25 3.9E-30 243.1 3.4 128 6-134 3-151 (362)
337 3goz_A Leucine-rich repeat-con 99.9 4.6E-25 1.6E-29 238.4 8.0 250 30-279 2-299 (362)
338 4glp_A Monocyte differentiatio 99.9 1.4E-24 4.7E-29 229.3 11.2 225 169-398 65-308 (310)
339 1h6u_A Internalin H; cell adhe 99.9 6E-24 2.1E-28 223.8 15.2 194 23-254 38-231 (308)
340 1h6u_A Internalin H; cell adhe 99.9 8.1E-24 2.8E-28 222.9 15.6 213 28-280 21-233 (308)
341 4ay9_X Follicle-stimulating ho 99.9 5.8E-24 2E-28 228.5 14.8 239 29-275 12-257 (350)
342 3m19_A Variable lymphocyte rec 99.9 1.8E-23 6.2E-28 213.5 15.9 178 169-349 15-192 (251)
343 3m19_A Variable lymphocyte rec 99.9 7.1E-23 2.4E-27 209.1 17.9 180 146-327 15-194 (251)
344 4glp_A Monocyte differentiatio 99.9 1.3E-23 4.3E-28 221.9 12.7 223 2-230 65-308 (310)
345 2ast_B S-phase kinase-associat 99.9 8.6E-25 2.9E-29 233.9 2.0 101 52-155 49-152 (336)
346 2ca6_A RAN GTPase-activating p 99.9 1.7E-25 5.8E-30 244.2 -3.6 258 52-352 11-319 (386)
347 2ast_B S-phase kinase-associat 99.9 1.9E-24 6.6E-29 231.2 4.2 251 99-402 49-311 (336)
348 2ca6_A RAN GTPase-activating p 99.9 2.9E-25 9.9E-30 242.3 -2.7 235 164-398 28-317 (386)
349 1zar_A RIO2 kinase; serine kin 99.9 1.9E-22 6.4E-27 208.9 11.9 146 499-662 83-242 (282)
350 2o6s_A Variable lymphocyte rec 99.9 1.1E-21 3.9E-26 194.0 15.3 178 172-359 11-188 (208)
351 2o6s_A Variable lymphocyte rec 99.9 1.6E-21 5.3E-26 193.1 14.2 190 148-350 10-199 (208)
352 3cvr_A Invasion plasmid antige 99.9 8.9E-22 3E-26 222.3 13.8 186 51-262 60-252 (571)
353 3cvr_A Invasion plasmid antige 99.9 1E-21 3.5E-26 221.8 12.6 200 69-311 49-253 (571)
354 1h6t_A Internalin B; cell adhe 99.8 4.2E-21 1.4E-25 200.3 14.3 189 28-254 26-214 (291)
355 1h6t_A Internalin B; cell adhe 99.8 4.5E-21 1.6E-25 200.0 12.3 173 22-230 42-214 (291)
356 2xot_A Amphoterin-induced prot 99.8 1.2E-20 4E-25 203.5 14.1 162 149-312 22-187 (361)
357 1m9s_A Internalin B; cell inva 99.8 1.1E-20 3.6E-25 216.0 14.0 190 28-255 23-212 (605)
358 1m9s_A Internalin B; cell inva 99.8 1.4E-20 4.7E-25 215.1 14.4 205 51-293 22-226 (605)
359 2xot_A Amphoterin-induced prot 99.8 1.4E-20 4.9E-25 202.8 13.7 177 171-350 21-203 (361)
360 2v9t_B SLIT homolog 2 protein 99.8 4.3E-20 1.5E-24 184.1 15.0 150 149-300 15-164 (220)
361 2v9t_B SLIT homolog 2 protein 99.8 6.9E-20 2.3E-24 182.6 15.3 150 5-158 15-165 (220)
362 1xeu_A Internalin C; cellular 99.8 7.8E-21 2.7E-25 195.0 7.6 168 51-255 20-187 (263)
363 2v70_A SLIT-2, SLIT homolog 2 99.8 7E-20 2.4E-24 182.6 13.9 151 149-301 15-166 (220)
364 3sb4_A Hypothetical leucine ri 99.8 1.4E-20 4.6E-25 200.4 7.8 222 167-391 100-328 (329)
365 2v70_A SLIT-2, SLIT homolog 2 99.8 7.7E-20 2.6E-24 182.3 12.1 153 219-374 14-167 (220)
366 4fdw_A Leucine rich hypothetic 99.8 1.6E-18 5.4E-23 188.3 23.1 265 25-302 112-384 (401)
367 1xeu_A Internalin C; cellular 99.8 2.2E-20 7.5E-25 191.6 7.9 171 24-231 17-187 (263)
368 3sb4_A Hypothetical leucine ri 99.8 4.8E-20 1.6E-24 196.1 10.0 260 25-294 48-327 (329)
369 3e6j_A Variable lymphocyte rec 99.8 5.5E-19 1.9E-23 177.3 15.7 135 192-327 40-174 (229)
370 1dce_A Protein (RAB geranylger 99.8 4.2E-22 1.4E-26 226.3 -8.1 204 94-319 346-567 (567)
371 1dce_A Protein (RAB geranylger 99.8 1.4E-21 4.9E-26 221.9 -3.8 203 118-343 346-567 (567)
372 4fdw_A Leucine rich hypothetic 99.8 2.7E-18 9.1E-23 186.5 21.7 267 46-325 109-383 (401)
373 3e6j_A Variable lymphocyte rec 99.8 1E-18 3.4E-23 175.4 15.4 151 148-301 22-172 (229)
374 4ezg_A Putative uncharacterize 99.8 6.1E-19 2.1E-23 172.7 9.7 107 47-156 41-147 (197)
375 1zth_A RIO1 serine protein kin 99.8 1.4E-18 4.7E-23 177.7 11.4 143 506-663 47-220 (258)
376 4fs7_A Uncharacterized protein 99.8 2.1E-17 7.1E-22 180.4 21.4 331 17-389 62-393 (394)
377 4ezg_A Putative uncharacterize 99.8 1.8E-18 6.2E-23 169.3 11.5 152 189-348 41-193 (197)
378 4b8c_D Glucose-repressible alc 99.8 3.8E-19 1.3E-23 208.4 6.2 197 25-250 172-369 (727)
379 4fs7_A Uncharacterized protein 99.7 2.4E-17 8.1E-22 179.9 19.8 318 38-394 59-376 (394)
380 4b8c_D Glucose-repressible alc 99.7 5.4E-19 1.9E-23 207.1 7.1 189 199-398 208-405 (727)
381 1w8a_A SLIT protein; signaling 99.7 3.8E-17 1.3E-21 159.0 11.9 127 171-300 11-138 (192)
382 1w8a_A SLIT protein; signaling 99.7 1.8E-17 6.2E-22 161.3 9.5 128 195-325 11-139 (192)
383 2ell_A Acidic leucine-rich nuc 99.7 3.2E-17 1.1E-21 155.9 8.9 137 24-162 22-164 (168)
384 2wfh_A SLIT homolog 2 protein 99.7 3E-16 1E-20 152.6 13.8 125 5-134 14-139 (193)
385 2ell_A Acidic leucine-rich nuc 99.7 1.4E-16 4.9E-21 151.4 11.2 132 192-349 24-160 (168)
386 2je0_A Acidic leucine-rich nuc 99.7 8.5E-17 2.9E-21 149.6 9.0 129 24-154 15-149 (149)
387 2o6r_A Variable lymphocyte rec 99.7 4.6E-16 1.6E-20 149.3 13.3 129 4-136 10-139 (177)
388 2je0_A Acidic leucine-rich nuc 99.7 1.4E-16 4.7E-21 148.2 8.2 124 3-129 19-148 (149)
389 2wfh_A SLIT homolog 2 protein 99.6 6.3E-16 2.2E-20 150.3 12.7 126 172-301 14-139 (193)
390 4gt6_A Cell surface protein; l 99.6 5E-15 1.7E-19 161.4 20.8 333 16-372 53-390 (394)
391 4gyi_A RIO2 kinase; protein ki 99.6 1.6E-16 5.4E-21 168.2 7.6 152 500-665 89-268 (397)
392 2o6r_A Variable lymphocyte rec 99.6 1.2E-15 4.1E-20 146.4 13.0 111 192-302 28-138 (177)
393 1a9n_A U2A', U2A'; complex (nu 99.6 8.8E-16 3E-20 147.1 9.8 133 21-158 14-153 (176)
394 4gt6_A Cell surface protein; l 99.6 3.7E-14 1.3E-18 154.5 22.6 322 38-396 51-390 (394)
395 1a9n_A U2A', U2A'; complex (nu 99.6 1.1E-15 3.9E-20 146.3 8.1 137 44-206 13-154 (176)
396 1ds9_A Outer arm dynein; leuci 99.6 7.5E-17 2.6E-21 157.8 -3.3 130 191-325 17-153 (198)
397 1ds9_A Outer arm dynein; leuci 99.6 7E-17 2.4E-21 158.1 -3.8 153 214-397 16-185 (198)
398 3g39_A Variable lymphocyte rec 99.5 3.5E-14 1.2E-18 134.9 11.3 106 27-135 10-116 (170)
399 4h09_A Hypothetical leucine ri 99.5 1.1E-12 3.6E-17 142.3 23.1 302 22-336 42-356 (379)
400 2r9u_A Variable lymphocyte rec 99.5 7.8E-14 2.7E-18 132.9 11.5 104 28-134 14-118 (174)
401 3g39_A Variable lymphocyte rec 99.5 1.5E-13 5E-18 130.6 11.8 104 148-253 12-115 (170)
402 2r9u_A Variable lymphocyte rec 99.5 2.9E-13 9.9E-18 129.0 11.9 86 192-277 33-118 (174)
403 4h09_A Hypothetical leucine ri 99.4 2.9E-12 1E-16 138.8 20.5 303 45-360 41-356 (379)
404 2ifg_A High affinity nerve gro 99.3 3.6E-12 1.2E-16 136.3 12.1 102 6-110 13-116 (347)
405 3un9_A NLR family member X1; l 99.3 2E-14 6.9E-19 154.5 -5.5 165 191-375 71-254 (372)
406 3un9_A NLR family member X1; l 99.3 2.1E-14 7E-19 154.4 -5.7 165 167-351 71-254 (372)
407 2ifg_A High affinity nerve gro 99.3 6.1E-12 2.1E-16 134.5 10.8 103 149-253 12-116 (347)
408 3tm0_A Aminoglycoside 3'-phosp 99.2 2.6E-11 9E-16 124.0 11.8 147 501-660 9-212 (263)
409 1nd4_A Aminoglycoside 3'-phosp 99.1 1.2E-10 4.1E-15 118.9 9.9 137 507-661 21-214 (264)
410 3dxp_A Putative acyl-COA dehyd 99.0 1.6E-09 5.6E-14 116.1 12.5 144 510-662 42-249 (359)
411 2ra8_A Uncharacterized protein 98.9 3.7E-10 1.3E-14 120.1 2.8 58 70-129 168-227 (362)
412 3sg8_A APH(2'')-ID; antibiotic 98.9 1.7E-09 5.9E-14 113.0 7.5 191 511-722 25-287 (304)
413 2ra8_A Uncharacterized protein 98.9 6.6E-10 2.3E-14 118.2 3.0 83 311-395 251-341 (362)
414 3r70_A Aminoglycoside phosphot 98.7 2.2E-07 7.6E-12 97.6 14.6 138 507-663 38-239 (320)
415 3rw6_A Nuclear RNA export fact 98.6 3E-09 1E-13 107.1 -1.7 105 22-127 137-257 (267)
416 1io0_A Tropomodulin; LRR prote 98.6 9.8E-09 3.3E-13 98.4 1.9 113 22-134 32-164 (185)
417 3rw6_A Nuclear RNA export fact 98.5 3.6E-08 1.2E-12 99.3 3.0 105 284-390 137-257 (267)
418 1io0_A Tropomodulin; LRR prote 98.4 3.2E-08 1.1E-12 94.8 1.2 96 40-135 26-137 (185)
419 4gkh_A Aminoglycoside 3'-phosp 98.4 1.5E-06 5E-11 88.9 13.2 135 513-661 31-223 (272)
420 3d1u_A Putative fructosamine-3 98.4 1.3E-06 4.5E-11 89.8 11.5 142 509-660 18-215 (288)
421 3tdw_A Gentamicin resistance p 98.4 3.2E-06 1.1E-10 87.9 14.3 138 511-663 24-226 (306)
422 3ovc_A Hygromycin-B 4-O-kinase 98.2 6.7E-06 2.3E-10 87.6 11.9 146 508-663 43-245 (362)
423 3ats_A Putative uncharacterize 98.0 8.9E-06 3E-10 86.7 9.1 83 511-594 25-121 (357)
424 2olc_A MTR kinase, methylthior 97.9 4E-05 1.4E-09 82.9 11.9 79 511-591 35-120 (397)
425 2q83_A YTAA protein; 2635576, 97.9 6.2E-05 2.1E-09 79.5 11.7 141 512-661 38-252 (346)
426 3jr1_A Putative fructosamine-3 97.9 0.0001 3.6E-09 76.2 12.9 139 510-657 40-232 (312)
427 3e4g_A ATP synthase subunit S, 97.7 1.2E-05 4E-10 75.0 2.6 83 289-371 62-150 (176)
428 3e4g_A ATP synthase subunit S, 97.7 2.4E-05 8E-10 72.9 3.9 35 240-274 61-95 (176)
429 2pyw_A Uncharacterized protein 97.6 0.0004 1.4E-08 75.6 13.8 78 510-590 38-122 (420)
430 3f7w_A Putative fructosamine-3 97.6 0.00017 5.9E-09 74.0 9.7 79 507-593 16-97 (288)
431 1pgv_A TMD-1, tropomodulin TMD 97.5 3.7E-05 1.3E-09 73.0 3.3 83 25-107 40-136 (197)
432 3csv_A Aminoglycoside phosphot 97.2 0.0011 3.7E-08 69.6 10.6 142 513-663 25-219 (333)
433 3dxq_A Choline/ethanolamine ki 97.2 0.0016 5.6E-08 67.1 11.8 143 508-663 20-204 (301)
434 3rfe_A Platelet glycoprotein I 97.2 0.00046 1.6E-08 61.1 6.4 55 78-134 12-68 (130)
435 1pgv_A TMD-1, tropomodulin TMD 97.2 9.4E-05 3.2E-09 70.2 1.9 15 189-203 154-168 (197)
436 1zyl_A Hypothetical protein YI 97.1 0.0049 1.7E-07 64.3 14.0 143 512-662 32-224 (328)
437 2ppq_A HSK, HK, homoserine kin 97.0 0.0039 1.3E-07 64.9 12.2 157 498-661 9-217 (322)
438 3feg_A Choline/ethanolamine ki 96.9 0.0032 1.1E-07 66.8 10.7 142 512-662 56-255 (379)
439 3rfe_A Platelet glycoprotein I 96.9 0.0012 4E-08 58.5 6.1 55 172-229 12-68 (130)
440 1nw1_A Choline kinase (49.2 KD 96.9 0.0018 6.1E-08 70.4 8.5 73 511-593 78-159 (429)
441 2qg7_A Ethanolamine kinase PV0 96.6 0.011 3.7E-07 64.5 11.9 74 511-593 113-188 (458)
442 3i1a_A Spectinomycin phosphotr 96.5 0.015 5.3E-07 60.8 12.3 33 631-663 206-238 (339)
443 3c5i_A Choline kinase; choline 96.5 0.0046 1.6E-07 65.7 8.0 73 512-593 39-121 (369)
444 3f2s_A CK, chetk-alpha, cholin 95.7 0.03 1E-06 59.6 9.5 146 512-661 58-280 (401)
445 2yle_A Protein spire homolog 1 95.2 0.047 1.6E-06 52.0 7.8 103 591-721 33-135 (229)
446 3mes_A Choline kinase; malaria 95.0 0.15 5.1E-06 54.8 12.2 142 511-662 75-292 (424)
447 3g15_A CK, chetk-alpha, cholin 91.4 0.65 2.2E-05 49.5 9.9 31 632-662 245-281 (401)
448 2ks1_B Epidermal growth factor 89.4 0.33 1.1E-05 32.9 3.3 29 441-469 12-40 (44)
449 4ann_A ESSB; membrane protein, 88.0 1 3.5E-05 42.8 7.0 117 564-724 43-159 (215)
450 2l2t_A Receptor tyrosine-prote 82.4 0.8 2.7E-05 30.9 2.4 27 441-467 11-37 (44)
451 4ano_A ESSB; membrane protein, 79.9 4.7 0.00016 38.3 7.8 116 564-724 48-164 (219)
452 2lz0_A Uncharacterized protein 79.1 4.1 0.00014 33.4 6.3 48 178-226 6-53 (100)
453 3cxl_A N-chimerin; SH2, RHO-GA 76.0 0.38 1.3E-05 52.4 -1.2 61 511-576 147-214 (463)
454 2lz0_A Uncharacterized protein 68.7 10 0.00035 31.0 6.2 49 201-250 5-53 (100)
455 2jwa_A Receptor tyrosine-prote 61.7 4.5 0.00015 27.3 2.1 6 443-448 15-20 (44)
456 2k1k_A Ephrin type-A receptor 44.3 12 0.00041 24.4 1.9 10 442-451 13-22 (38)
457 2k9y_A Ephrin type-A receptor 41.5 16 0.00056 24.1 2.4 11 443-453 16-26 (41)
458 1zza_A Stannin, AG8_1; helix, 29.3 69 0.0023 23.7 4.1 29 445-473 19-47 (90)
459 3ls8_A Phosphatidylinositol 3- 27.0 6.5E+02 0.022 27.7 13.4 46 608-660 454-501 (614)
460 1cja_A Protein (actin-fragmin 26.6 1.8E+02 0.0062 29.4 8.1 138 511-662 74-238 (342)
461 2klu_A T-cell surface glycopro 25.3 73 0.0025 23.4 3.5 11 463-473 32-42 (70)
462 2x6h_A GH13170P, VPS34, phosph 23.8 6.4E+02 0.022 28.3 12.8 45 609-660 529-575 (696)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=9.3e-54 Score=509.02 Aligned_cols=418 Identities=36% Similarity=0.579 Sum_probs=329.9
Q ss_pred eEEEEcCCCCCcccCCcCccCCCCCCcEEECCCCCccccCchhccCC-CCCCEEeCcCCcccccCCccccCCCCCCEEeC
Q 047901 3 VNSINLTSTGLKGTLQEFSFSSFPHLAYLDLSINGFFGTLPPQVRNL-SKLKYLDLSENELSGKIPPEIGLLTHLFSLDL 81 (786)
Q Consensus 3 ~~~l~l~~~~l~~~l~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 81 (786)
++.|+|++|.+.+.++.. .+++|++|+|++|++++..|..+..+ ++|++|+|++|++++..|..|+.+++|++|+|
T Consensus 249 L~~L~Ls~n~l~~~~~~~---~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 325 (768)
T 3rgz_A 249 LKLLNISSNQFVGPIPPL---PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLAL 325 (768)
T ss_dssp CCEEECCSSCCEESCCCC---CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEEC
T ss_pred CCEEECCCCcccCccCcc---ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEEC
Confidence 344444444444444432 44555555555555554555555443 66666666666666666666666666666666
Q ss_pred CCccCcccCC-C-CCCCCCCcEEEccCCcCcccCchhhcccC-CcceeccccccccccCChhhhc--cCccceeeccccc
Q 047901 82 SLNQFSGTFP-P-ICNLSNLKYISLHNNKLSGSIPEEIGNLM-KLSYLMLDTNQFTGQLPRNICR--SGLLEILTVNDNH 156 (786)
Q Consensus 82 s~N~l~~~~~-~-~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~--~~~L~~L~l~~N~ 156 (786)
++|++++..+ . +..+++|++|+|++|++++..|..+.+++ +|++|++++|++++..|..++. +++|+.|++++|.
T Consensus 326 ~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~ 405 (768)
T 3rgz_A 326 SSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNG 405 (768)
T ss_dssp CSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSE
T ss_pred CCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCc
Confidence 6666653333 2 56666666666666666666666666665 6666666666666666666655 5667777777777
Q ss_pred ccCCCC-CcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCcc
Q 047901 157 FLGSIP-NLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPE 235 (786)
Q Consensus 157 l~~~~~-~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 235 (786)
+++.++ .+.++++|+.|++++|++++..|..|..+++|++|+|++|++.+..|..|..+++|++|+|++|++++..|..
T Consensus 406 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 485 (768)
T 3rgz_A 406 FTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSG 485 (768)
T ss_dssp EEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGG
T ss_pred cccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHH
Confidence 775444 4778888888888888888888888888888888888888888888888888888999999999888888888
Q ss_pred ccCCccccEEEeecccccccCCCCcccccccccccccccccCCCCccccccCCcCceeccccccccccchh---------
Q 047901 236 IGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSILE--------- 306 (786)
Q Consensus 236 ~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~--------- 306 (786)
+.++++|+.|+|++|++++.+|..|..+++|+.|+|++|++++..|..+..+++|+.|++++|++.+..+.
T Consensus 486 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~ 565 (768)
T 3rgz_A 486 LSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKI 565 (768)
T ss_dssp GGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCB
T ss_pred HhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchh
Confidence 88889999999999999888888888899999999999999888888888999999999999888743332
Q ss_pred -------------------------------------------------------------hhhcccCCcEEEecccccC
Q 047901 307 -------------------------------------------------------------ALGFMFKLFYLNFSHNQFS 325 (786)
Q Consensus 307 -------------------------------------------------------------~~~~l~~L~~L~L~~N~l~ 325 (786)
.|..+++|++|+|++|+++
T Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~ 645 (768)
T 3rgz_A 566 AANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLS 645 (768)
T ss_dssp CCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCB
T ss_pred hhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCccc
Confidence 2334577999999999999
Q ss_pred CCcchHHhhhcCcCeeeccCCccCCCCCcccccccccceeccccccccccCCcccccCCCceEEeccCCcccccCCCCCc
Q 047901 326 QEIPEDLALLAHLSELDLSHNLFKGSIPSRICNLESLEKLNLSHNNISGQIPACFIGMSGLLSIDISYNELRGPIPNSTV 405 (786)
Q Consensus 326 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 405 (786)
+.+|..|+.++.|+.|+|++|++++.+|..|.++++|+.|+|++|+++|.+|..|..+++|+.||+++|+++|.+|....
T Consensus 646 g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~ 725 (768)
T 3rgz_A 646 GYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQ 725 (768)
T ss_dssp SCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSS
T ss_pred ccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCccccCCCCCCCCCC
Q 047901 406 FRNAPRESFLGNNFSTFYGT 425 (786)
Q Consensus 406 ~~~~~~~~~~~n~~~~~~~~ 425 (786)
+..++..+|.||+. +||.
T Consensus 726 ~~~~~~~~~~gN~~--Lcg~ 743 (768)
T 3rgz_A 726 FETFPPAKFLNNPG--LCGY 743 (768)
T ss_dssp GGGSCGGGGCSCTE--EEST
T ss_pred hccCCHHHhcCCch--hcCC
Confidence 99999999999997 8875
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=9.1e-53 Score=438.05 Aligned_cols=252 Identities=25% Similarity=0.420 Sum_probs=208.6
Q ss_pred ccCccceeeccccCceEEEEEcC------CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCC
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKLP------SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVR 579 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~ 579 (786)
++|.+.+.||+|+||+||+|++. ++..||||+++. ......++|.+|+++|++++|||||+++|+|.+++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~----~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~ 88 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKD----ASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD 88 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECS----CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCC----CChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC
Confidence 46888999999999999999864 467899999975 23455678999999999999999999999999999
Q ss_pred eeeEEEeccCCCCHHHHhhcCC----------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCC
Q 047901 580 HSFVVYEYINRGSLATVLSNNF----------ASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEY 649 (786)
Q Consensus 580 ~~~lv~e~~~~g~L~~~l~~~~----------~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~ 649 (786)
..|+|||||++|+|.++++... ....++|.++..|+.|||.||+|||++ +|+||||||+|||++.++
T Consensus 89 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~ 165 (299)
T 4asz_A 89 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENL 165 (299)
T ss_dssp SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGG
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCC
Confidence 9999999999999999997542 245799999999999999999999999 999999999999999999
Q ss_pred cEEEeccccceecCCCCCc--ceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCccc
Q 047901 650 EARVSDFGTAKLLKPNSSN--WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFLS 726 (786)
Q Consensus 650 ~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~~ 726 (786)
.+||+|||+|+........ .....||+.|||| |++.+..|+.++|||||||++|||+| |+.||....
T Consensus 166 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAP----------E~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~ 235 (299)
T 4asz_A 166 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPP----------ESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS 235 (299)
T ss_dssp CEEECCCSCHHHHTGGGCEEETTTEEECGGGCCH----------HHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred cEEECCcccceecCCCCceeecCceecChhhcCH----------HHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC
Confidence 9999999999876543322 1235799999999 88889999999999999999999999 999987533
Q ss_pred cccCCCcchhhhhhhhccCC-CCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 727 LFSSSSSSINIEFNAMLDHR-LPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
..+....+.... ...|... +.++.++|.+||+.||++||||+||.+.|
T Consensus 236 --------~~~~~~~i~~~~~~~~p~~~----~~~~~~li~~cl~~dP~~RPs~~~i~~~L 284 (299)
T 4asz_A 236 --------NNEVIECITQGRVLQRPRTC----PQEVYELMLGCWQREPHMRKNIKGIHTLL 284 (299)
T ss_dssp --------HHHHHHHHHHTCCCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred --------HHHHHHHHHcCCCCCCCccc----hHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 122233333333 3334333 34589999999999999999999998754
No 3
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=3.6e-52 Score=439.66 Aligned_cols=252 Identities=25% Similarity=0.417 Sum_probs=203.4
Q ss_pred ccCccceeeccccCceEEEEEcC------CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCC
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKLP------SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVR 579 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~ 579 (786)
++|...++||+|+||+||+|+++ +++.||||+++. ......++|.+|+++|++++|||||+++|+|.+.+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~----~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~ 116 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE----ASESARQDFQREAELLTMLQHQHIVRFFGVCTEGR 116 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESC----CSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECc----CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC
Confidence 46788899999999999999864 467899999975 33456678999999999999999999999999999
Q ss_pred eeeEEEeccCCCCHHHHhhcCCC------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCC
Q 047901 580 HSFVVYEYINRGSLATVLSNNFA------------SEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDL 647 (786)
Q Consensus 580 ~~~lv~e~~~~g~L~~~l~~~~~------------~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~ 647 (786)
..|+|||||++|+|.++++.... ..+++|.+++.|+.|||.||+|||++ +|+||||||+|||++.
T Consensus 117 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~ 193 (329)
T 4aoj_A 117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQ 193 (329)
T ss_dssp SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEET
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECC
Confidence 99999999999999999976422 24689999999999999999999998 9999999999999999
Q ss_pred CCcEEEeccccceecCCCCC--cceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCc
Q 047901 648 EYEARVSDFGTAKLLKPNSS--NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDF 724 (786)
Q Consensus 648 ~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~ 724 (786)
++.+||+|||+|+....... ......||+.|||| |++.+..|+.++|||||||++|||+| |+.||..
T Consensus 194 ~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAP----------E~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~ 263 (329)
T 4aoj_A 194 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPP----------ESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQ 263 (329)
T ss_dssp TTEEEECCCC----------------CCCCGGGCCH----------HHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCS
T ss_pred CCcEEEcccccceeccCCCcceecCcccccccccCh----------hhhcCCCCCccccccchHHHHHHHHcCCCCCCCC
Confidence 99999999999987654332 22346799999999 88889999999999999999999999 9999875
Q ss_pred cccccCCCcchhhhhhhhccC-CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 725 LSLFSSSSSSINIEFNAMLDH-RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
... .+....+... +...|... +..+.++|.+||++||++||||+||++.|
T Consensus 264 ~~~--------~~~~~~i~~g~~~~~p~~~----~~~~~~li~~cl~~dP~~RPs~~ei~~~L 314 (329)
T 4aoj_A 264 LSN--------TEAIDCITQGRELERPRAC----PPEVYAIMRGCWQREPQQRHSIKDVHARL 314 (329)
T ss_dssp SCH--------HHHHHHHHHTCCCCCCTTC----CHHHHHHHHHHCCSSTTTSCCHHHHHHHH
T ss_pred CCH--------HHHHHHHHcCCCCCCcccc----cHHHHHHHHHHcCcChhHCcCHHHHHHHH
Confidence 331 2222333332 33444433 34589999999999999999999998764
No 4
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.5e-52 Score=436.68 Aligned_cols=253 Identities=19% Similarity=0.321 Sum_probs=208.0
Q ss_pred ccCccceeeccccCceEEEEEcC------CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCC
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKLP------SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVR 579 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~ 579 (786)
.+++..++||+|+||+||+|++. +++.||||+++... .....++|.+|+.++++++|||||+++|+|.+++
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~---~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~ 102 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA---EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQ 102 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C---CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc---ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECC
Confidence 35677889999999999999863 45789999997532 2334578999999999999999999999999999
Q ss_pred eeeEEEeccCCCCHHHHhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeC
Q 047901 580 HSFVVYEYINRGSLATVLSNNFA-------------SEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLD 646 (786)
Q Consensus 580 ~~~lv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~ 646 (786)
..++|||||++|+|.+++..... ...++|..+..|+.|||.||+|||++ +||||||||+|||++
T Consensus 103 ~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~ 179 (308)
T 4gt4_A 103 PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVY 179 (308)
T ss_dssp SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC
T ss_pred EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEEC
Confidence 99999999999999999965321 24589999999999999999999999 999999999999999
Q ss_pred CCCcEEEeccccceecCCCCC--cceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCC
Q 047901 647 LEYEARVSDFGTAKLLKPNSS--NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGD 723 (786)
Q Consensus 647 ~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~ 723 (786)
+++++||+|||+|+....... ......||+.|||| |++.++.|+.++|||||||++|||+| |+.||.
T Consensus 180 ~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAP----------E~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~ 249 (308)
T 4gt4_A 180 DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAP----------EAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYC 249 (308)
T ss_dssp GGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCH----------HHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred CCCCEEECCcccceeccCCCceeEecccccCCcccCH----------HHHhCCCCCccchhhhHHHHHHHHHhCCCCCCC
Confidence 999999999999987653322 23446899999999 88889999999999999999999998 899987
Q ss_pred ccccccCCCcchhhhhhhhccC-CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 724 FLSLFSSSSSSINIEFNAMLDH-RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
.... .+....+... +.+.|.. ++..+.++|.+||+.||++||||.||++.|
T Consensus 250 ~~~~--------~~~~~~i~~~~~~~~p~~----~~~~~~~li~~C~~~dP~~RPs~~ei~~~L 301 (308)
T 4gt4_A 250 GYSN--------QDVVEMIRNRQVLPCPDD----CPAWVYALMIECWNEFPSRRPRFKDIHSRL 301 (308)
T ss_dssp TCCH--------HHHHHHHHTTCCCCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCH--------HHHHHHHHcCCCCCCccc----chHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 5321 2222223332 2333433 334589999999999999999999999864
No 5
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=4.7e-52 Score=438.30 Aligned_cols=251 Identities=20% Similarity=0.321 Sum_probs=206.3
Q ss_pred ccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeEE
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVV 584 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 584 (786)
++|++.+.||+|+||+||+|+.. +++.||||++.... ......+.|.+|++++++++|||||++++++.+++..|+|
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiV 101 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISR--MSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIV 101 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTT--SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHH--CCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 57999999999999999999864 78999999997532 2334567899999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecCC
Q 047901 585 YEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKP 664 (786)
Q Consensus 585 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 664 (786)
||||+||+|.+++... ....+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+....
T Consensus 102 mEy~~gg~L~~~i~~~-~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 177 (350)
T 4b9d_A 102 MDYCEGGDLFKRINAQ-KGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177 (350)
T ss_dssp EECCTTCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCH
T ss_pred EeCCCCCcHHHHHHHc-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecC
Confidence 9999999999999764 345678999999999999999999999 999999999999999999999999999987754
Q ss_pred CCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhhcc
Q 047901 665 NSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAMLD 744 (786)
Q Consensus 665 ~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 744 (786)
........+||+.|||| |++.+..|+.++||||+||++|||+||+.||.... ....+..+..
T Consensus 178 ~~~~~~~~~GT~~YmAP----------E~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~--------~~~~~~~i~~ 239 (350)
T 4b9d_A 178 TVELARACIGTPYYLSP----------EICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS--------MKNLVLKIIS 239 (350)
T ss_dssp HHHHHHHHHSCCTTCCH----------HHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS--------HHHHHHHHHH
T ss_pred CcccccccCCCccccCH----------HHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--------HHHHHHHHHc
Confidence 33333456899999999 88888899999999999999999999999987432 2233344444
Q ss_pred CCCC-CCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 745 HRLP-HPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 745 ~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
...+ .+.. .+..+.++|.+||.+||++|||++|+++
T Consensus 240 ~~~~~~~~~----~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 240 GSFPPVSLH----YSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp TCCCCCCTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCCCCCcc----CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 4332 2222 2345889999999999999999999975
No 6
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-51 Score=429.73 Aligned_cols=254 Identities=23% Similarity=0.381 Sum_probs=200.5
Q ss_pred hccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeEE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVV 584 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 584 (786)
.+++++.++||+|+||+||+|+++ ..||||+++... ......+.|.+|++++++++|||||+++|++.+ +..++|
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~--~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iV 109 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVD--PTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIV 109 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSS--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecC--CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEE
Confidence 357888999999999999999975 369999986532 334556789999999999999999999999865 568999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecCC
Q 047901 585 YEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKP 664 (786)
Q Consensus 585 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 664 (786)
||||++|+|.+++... ...+++.++..|+.|||.||+|||++ +||||||||+|||+++++.+||+|||+|+....
T Consensus 110 mEy~~gGsL~~~l~~~--~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~ 184 (307)
T 3omv_A 110 TQWCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp EECCSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC---
T ss_pred EEcCCCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceeccc
Confidence 9999999999999754 35799999999999999999999999 999999999999999999999999999987653
Q ss_pred CC--CcceeeccCccccCCCCCCCCchHHHHhhh---cCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhh
Q 047901 665 NS--SNWTELVGTFGYVAPAHGNIGLHLAELAYT---MKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEF 739 (786)
Q Consensus 665 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~---~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~ 739 (786)
.. ......+||+.|||| |++.+ ..|+.++|||||||++|||+||+.||..... ....
T Consensus 185 ~~~~~~~~~~~GT~~ymAP----------E~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~--------~~~~ 246 (307)
T 3omv_A 185 WSGSQQVEQPTGSVLWMAP----------EVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN--------RDQI 246 (307)
T ss_dssp ---------CCCCTTSCCH----------HHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC--------HHHH
T ss_pred CCcceeecccccCCCccCH----------HHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCCh--------HHHH
Confidence 22 223456899999999 66653 4589999999999999999999999875321 1111
Q ss_pred hhhccCCCCCC--ChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 740 NAMLDHRLPHP--SLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 740 ~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
...+......| .....+++..+.++|.+||++||++||||.||++.|
T Consensus 247 ~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L 295 (307)
T 3omv_A 247 IFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSI 295 (307)
T ss_dssp HHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHH
T ss_pred HHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHH
Confidence 22222211111 111223345689999999999999999999998753
No 7
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=4.6e-52 Score=437.66 Aligned_cols=249 Identities=24% Similarity=0.352 Sum_probs=209.6
Q ss_pred ccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeEE
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVV 584 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 584 (786)
..|+..++||+|+||+||+|+.+ +|+.||||++.... ....+.+.+|+++|+.++|||||++++++.+++..|+|
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~----~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iv 149 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 149 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG----CSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCc----hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 45999999999999999999865 78999999996521 22345688999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecCC
Q 047901 585 YEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKP 664 (786)
Q Consensus 585 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 664 (786)
||||++|+|.+++.. +.+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+..
T Consensus 150 mEy~~gg~L~~~l~~----~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 222 (346)
T 4fih_A 150 MEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 222 (346)
T ss_dssp ECCCTTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EeCCCCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCC
Confidence 999999999999975 3589999999999999999999999 999999999999999999999999999998876
Q ss_pred CCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhhcc
Q 047901 665 NSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAMLD 744 (786)
Q Consensus 665 ~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 744 (786)
........+||+.|||| |++.+..|+.++||||+||++|||++|+.||..... ...+..+.+
T Consensus 223 ~~~~~~~~~GTp~YmAP----------Evl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--------~~~~~~i~~ 284 (346)
T 4fih_A 223 EVPRRKSLVGTPYWMAP----------ELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--------LKAMKMIRD 284 (346)
T ss_dssp SSCCBCCCCSCGGGCCH----------HHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHHHHHHH
T ss_pred CCCcccccccCcCcCCH----------HHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--------HHHHHHHHc
Confidence 55556678999999999 888888999999999999999999999999874321 122222222
Q ss_pred CCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 745 HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 745 ~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.... ........+.++.+++.+||.+||++|||++|+++
T Consensus 285 ~~~~-~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 285 NLPP-RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp SSCC-CCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCCC-CCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 2111 11112233456899999999999999999999975
No 8
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.8e-50 Score=479.04 Aligned_cols=414 Identities=31% Similarity=0.464 Sum_probs=326.3
Q ss_pred CeEEEEcCCCCCcccCCcCccCCCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeC
Q 047901 2 RVNSINLTSTGLKGTLQEFSFSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDL 81 (786)
Q Consensus 2 ~~~~l~l~~~~l~~~l~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 81 (786)
+++.|+|++|.+.+.++. |..+++|++|+|++|++++..|..|.++++|++|+|++|++++..|.. .+++|++|+|
T Consensus 201 ~L~~L~Ls~n~l~~~~~~--l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L 276 (768)
T 3rgz_A 201 NLEFLDVSSNNFSTGIPF--LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSL 276 (768)
T ss_dssp TCCEEECCSSCCCSCCCB--CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEEC
T ss_pred cCCEEECcCCcCCCCCcc--cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEEC
Confidence 467788888888776665 788888888888888888788888888888888888888877655543 5666666666
Q ss_pred CCccCccc-CCCCCC-CCCCcEEEccCCcCcccCchhhcccCCcceeccccccccccCChh-hhccCccceeeccccccc
Q 047901 82 SLNQFSGT-FPPICN-LSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRN-ICRSGLLEILTVNDNHFL 158 (786)
Q Consensus 82 s~N~l~~~-~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-~~~~~~L~~L~l~~N~l~ 158 (786)
++|++++. +..+.. +++|++|+|++|++++..|..|+++++|++|+|++|++++.+|.. +..+++|+.|++++|.++
T Consensus 277 ~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~ 356 (768)
T 3rgz_A 277 AENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFS 356 (768)
T ss_dssp CSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEE
T ss_pred cCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccC
Confidence 66666533 333443 366666666666666666666666666666666666665555543 555555555555555554
Q ss_pred CCC--------------------------CCcCC--CCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCc
Q 047901 159 GSI--------------------------PNLRN--CRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISS 210 (786)
Q Consensus 159 ~~~--------------------------~~l~~--l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~ 210 (786)
+.. +.+.. +++|+.|++++|++++..+..|..+++|++|+|++|++++..|.
T Consensus 357 ~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 436 (768)
T 3rgz_A 357 GELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPS 436 (768)
T ss_dssp ECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCG
T ss_pred ccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccH
Confidence 222 22222 56788888888888888888888899999999999999988899
Q ss_pred CccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCCCCcccccccccccccccccCCCCccccccCCcC
Q 047901 211 NWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTEL 290 (786)
Q Consensus 211 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 290 (786)
.|..+++|+.|+|++|++++.+|..+..+++|+.|+|++|++++.+|..|.++++|+.|+|++|++++..|..|+.+++|
T Consensus 437 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 516 (768)
T 3rgz_A 437 SLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENL 516 (768)
T ss_dssp GGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTC
T ss_pred HHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCC
Confidence 99999999999999999998889999999999999999999998899999999999999999999998999999999999
Q ss_pred ceeccccccccccchhhhhcccCCcEEEecccccCCCcchHHh-------------------------------------
Q 047901 291 EYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQEIPEDLA------------------------------------- 333 (786)
Q Consensus 291 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~------------------------------------- 333 (786)
+.|+|++|++.+..+..+..+++|++|++++|.+++.+|..+.
T Consensus 517 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (768)
T 3rgz_A 517 AILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEF 596 (768)
T ss_dssp CEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEEC
T ss_pred CEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccccccccccccccc
Confidence 9999999999988889999999999999999999877765442
Q ss_pred ---------------------------------hhcCcCeeeccCCccCCCCCcccccccccceeccccccccccCCccc
Q 047901 334 ---------------------------------LLAHLSELDLSHNLFKGSIPSRICNLESLEKLNLSHNNISGQIPACF 380 (786)
Q Consensus 334 ---------------------------------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~ 380 (786)
.+++|+.|||++|++++.+|..+.++++|+.|+|++|++++.+|..|
T Consensus 597 ~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l 676 (768)
T 3rgz_A 597 QGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEV 676 (768)
T ss_dssp TTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGG
T ss_pred ccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHH
Confidence 24678899999999999999999999999999999999999999999
Q ss_pred ccCCCceEEeccCCcccccCCCC-CccccCCCccccCCCC
Q 047901 381 IGMSGLLSIDISYNELRGPIPNS-TVFRNAPRESFLGNNF 419 (786)
Q Consensus 381 ~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~ 419 (786)
.++++|+.|||++|+++|.+|.. ..+.......+.+|+.
T Consensus 677 ~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l 716 (768)
T 3rgz_A 677 GDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNL 716 (768)
T ss_dssp GGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEE
T ss_pred hCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcc
Confidence 99999999999999999988864 2234444556666664
No 9
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.3e-51 Score=427.55 Aligned_cols=249 Identities=22% Similarity=0.321 Sum_probs=212.5
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|++.+.||+|+||+||+|+.. +++.||||++..... ......+.+.+|++++++++|||||++++++++++..|+
T Consensus 31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~-~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yi 109 (311)
T 4aw0_A 31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI-IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYF 109 (311)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHC-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 357999999999999999999864 789999999864110 112345679999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecC
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK 663 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 663 (786)
|||||+||+|.+++... +.+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+.
T Consensus 110 vmEy~~gG~L~~~i~~~---~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~ 183 (311)
T 4aw0_A 110 GLSYAKNGELLKYIRKI---GSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS 183 (311)
T ss_dssp EECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecC
Confidence 99999999999999864 5799999999999999999999999 99999999999999999999999999999875
Q ss_pred CCC--CcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhh
Q 047901 664 PNS--SNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNA 741 (786)
Q Consensus 664 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 741 (786)
... ......+||+.|||| |++.+..|+.++||||+||++|||+||+.||...+ .......
T Consensus 184 ~~~~~~~~~~~~GTp~YmAP----------Evl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--------~~~~~~~ 245 (311)
T 4aw0_A 184 PESKQARANSFVGTAQYVSP----------ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN--------EGLIFAK 245 (311)
T ss_dssp TTTTCCCBCCCCSCGGGCCH----------HHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHH
T ss_pred CCCCcccccCcccCcccCCH----------HHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHH
Confidence 432 234567899999999 88888999999999999999999999999987422 2334455
Q ss_pred hccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHH
Q 047901 742 MLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTV 782 (786)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev 782 (786)
+.......|.... .++.+++.+||.+||++|||++|+
T Consensus 246 i~~~~~~~p~~~s----~~~~dli~~lL~~dp~~R~t~~e~ 282 (311)
T 4aw0_A 246 IIKLEYDFPEKFF----PKARDLVEKLLVLDATKRLGCEEM 282 (311)
T ss_dssp HHHTCCCCCTTCC----HHHHHHHHHHSCSSGGGSTTSGGG
T ss_pred HHcCCCCCCcccC----HHHHHHHHHHccCCHhHCcChHHH
Confidence 5555555554333 348899999999999999999986
No 10
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=7.1e-50 Score=464.85 Aligned_cols=420 Identities=19% Similarity=0.160 Sum_probs=263.8
Q ss_pred CeEEEEcCCCCCcccCCcCccCCCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeC
Q 047901 2 RVNSINLTSTGLKGTLQEFSFSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDL 81 (786)
Q Consensus 2 ~~~~l~l~~~~l~~~l~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 81 (786)
.++.|+|++|.+. .++..+|.++++|++|+|++|+++++.|.+|.++++|++|+|++|+++++.|.+|+.+++|++|+|
T Consensus 34 ~l~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 34 STECLEFSFNVLP-TIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TCCEEECTTCCCS-EECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred cCcEEEccCCccC-cCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 3567777777776 344446777777777777777777777777777777777777777777666667777777777777
Q ss_pred CCccCcccC-CCCCCCCCCcEEEccCCcCcccCchhhcccCCcceeccccccccccCChhhhcc----------------
Q 047901 82 SLNQFSGTF-PPICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRS---------------- 144 (786)
Q Consensus 82 s~N~l~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~---------------- 144 (786)
++|+++++. ..+..+++|++|+|++|+++++....+.++++|++|++++|++++..|..+..+
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~ 192 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIA 192 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCC
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccC
Confidence 777666542 235555555555555555554433333334555555555554443333333333
Q ss_pred --------------------------------------------------------------------------------
Q 047901 145 -------------------------------------------------------------------------------- 144 (786)
Q Consensus 145 -------------------------------------------------------------------------------- 144 (786)
T Consensus 193 ~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~ 272 (606)
T 3t6q_A 193 GIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSN 272 (606)
T ss_dssp EECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTT
T ss_pred ccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHH
Confidence
Q ss_pred -----CccceeecccccccCCCCCcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCcccc-ccCcCccCCCCc
Q 047901 145 -----GLLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYG-EISSNWGKCHRL 218 (786)
Q Consensus 145 -----~~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~-~~~~~~~~l~~L 218 (786)
++|+.|++++|.++.++..+.++++|+.|++++|+++++.+..|..+++|++|++++|.+.+ +.+..|..+++|
T Consensus 273 ~~~~l~~L~~L~l~~n~l~~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L 352 (606)
T 3t6q_A 273 TFHCFSGLQELDLTATHLSELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENL 352 (606)
T ss_dssp TTTTCTTCSEEECTTSCCSCCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTC
T ss_pred HhccccCCCEEeccCCccCCCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcC
Confidence 34444444444444444444444445555555555544444444455555555555554442 223335555666
Q ss_pred cEEEccCcccCCCC--CccccCCccccEEEeecccccccCCCCcccccccccccccccccCCCCcc-ccccCCcCceecc
Q 047901 219 GTLIVSGNNITGRI--PPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPR-ALGLLTELEYFDL 295 (786)
Q Consensus 219 ~~L~L~~N~l~~~~--~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L 295 (786)
++|++++|++++.. +..+..+++|+.|++++|++.+..|..|..+++|+.|++++|++++..+. .|..+++|+.|++
T Consensus 353 ~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l 432 (606)
T 3t6q_A 353 RELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNL 432 (606)
T ss_dssp CEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEEC
T ss_pred CEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEEC
Confidence 66666666665443 45566666666666666666666666677777777777777777655443 3667777777777
Q ss_pred ccccccccchhhhhcccCCcEEEecccccCCC---cchHHhhhcCcCeeeccCCccCCCCCcccccccccceeccccccc
Q 047901 296 SSNRLNNSILEALGFMFKLFYLNFSHNQFSQE---IPEDLALLAHLSELDLSHNLFKGSIPSRICNLESLEKLNLSHNNI 372 (786)
Q Consensus 296 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 372 (786)
++|.+....+..|..+++|++|++++|.+++. .+..+..+++|+.|+|++|++++..|..|.++++|+.|+|++|++
T Consensus 433 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 512 (606)
T 3t6q_A 433 SHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRL 512 (606)
T ss_dssp TTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCcc
Confidence 77777776677777777777777777777652 224577777777777777777777777777777888888888888
Q ss_pred cccCCcccccCCCceEEeccCCcccccCCCC-CccccCCCccccCCCCCCCC
Q 047901 373 SGQIPACFIGMSGLLSIDISYNELRGPIPNS-TVFRNAPRESFLGNNFSTFY 423 (786)
Q Consensus 373 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~~~~~ 423 (786)
++..|..|.+++.| .|++++|++++.+|.. ..+.......+.+|++.|.|
T Consensus 513 ~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 563 (606)
T 3t6q_A 513 TSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTC 563 (606)
T ss_dssp CGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSG
T ss_pred CcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccC
Confidence 77777777777777 7888888877665542 23445566777888885554
No 11
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2e-50 Score=413.18 Aligned_cols=249 Identities=23% Similarity=0.331 Sum_probs=195.1
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|++.+.||+|+||+||+|+.. +++.||||++..... ......+.+.+|+++++.++|||||++++++.+++..|+
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~i 90 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVL-AKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIM 90 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHc-CCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 368999999999999999999865 789999999975332 223345679999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecC
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK 663 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 663 (786)
||||+ +|+|.+++..+ +.+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+|+...
T Consensus 91 vmEy~-~g~L~~~l~~~---~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~ 163 (275)
T 3hyh_A 91 VIEYA-GNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163 (275)
T ss_dssp EEECC-CEEHHHHHHHS---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC----
T ss_pred EEeCC-CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecC
Confidence 99999 67999999764 5799999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCcceeeccCccccCCCCCCCCchHHHHhhhcCc-CcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhh
Q 047901 664 PNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKI-TEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAM 742 (786)
Q Consensus 664 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~-~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 742 (786)
+. ......+||+.|||| |++.+..+ +.++||||+||++|||+||+.||.... .......+
T Consensus 164 ~~-~~~~~~~GT~~Y~AP----------E~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~--------~~~~~~~i 224 (275)
T 3hyh_A 164 DG-NFLKTSCGSPNYAAP----------EVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES--------IPVLFKNI 224 (275)
T ss_dssp ------------CTTSCH----------HHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHH
T ss_pred CC-CccCCeeECcccCCh----------hhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHH
Confidence 43 233457899999999 77777776 579999999999999999999987422 22333444
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 743 LDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.......|... +..+.+++.+||++||++|||++|+++
T Consensus 225 ~~~~~~~p~~~----s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 225 SNGVYTLPKFL----SPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp HHTCCCCCTTS----CHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HcCCCCCCCCC----CHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 44445444433 235889999999999999999999986
No 12
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=8.1e-51 Score=438.69 Aligned_cols=246 Identities=25% Similarity=0.363 Sum_probs=209.2
Q ss_pred ccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeEE
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVV 584 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 584 (786)
+.|+..++||+|+||+||+|+.+ +|+.||||++.... ....+.+.+|+++|+.++|||||++++++.+++..|+|
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~----~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iV 226 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 226 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTT----CSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccc----hhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEE
Confidence 46999999999999999999865 78999999997532 22345688999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecCC
Q 047901 585 YEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKP 664 (786)
Q Consensus 585 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 664 (786)
||||+||+|.+++.. +.+++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+..
T Consensus 227 mEy~~gG~L~~~i~~----~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~ 299 (423)
T 4fie_A 227 MEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 299 (423)
T ss_dssp EECCTTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCS
T ss_pred EeCCCCCcHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCC
Confidence 999999999999975 3589999999999999999999999 999999999999999999999999999998876
Q ss_pred CCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhhcc
Q 047901 665 NSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAMLD 744 (786)
Q Consensus 665 ~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 744 (786)
........+||+.|||| |++.+..|+.++||||+||++|||++|+.||..... ...+..+..
T Consensus 300 ~~~~~~~~~GTp~YmAP----------Evl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--------~~~~~~i~~ 361 (423)
T 4fie_A 300 EVPRRKSLVGTPYWMAP----------ELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--------LKAMKMIRD 361 (423)
T ss_dssp SCCCBCCCEECTTTCCH----------HHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHHHHHHH
T ss_pred CCccccccccCcCcCCH----------HHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--------HHHHHHHHc
Confidence 55556678999999999 888888999999999999999999999999874321 112222222
Q ss_pred C---CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 745 H---RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 745 ~---~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
. .+..+ ...+..+.+|+.+||.+||++|||++|+++
T Consensus 362 ~~~~~~~~~----~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 362 NLPPRLKNL----HKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp SCCCCCSCT----TSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCCCCCccc----ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1 22222 122345889999999999999999999975
No 13
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2.1e-50 Score=416.86 Aligned_cols=248 Identities=22% Similarity=0.345 Sum_probs=197.7
Q ss_pred ccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEec----CCeeeE
Q 047901 509 DAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSH----VRHSFV 583 (786)
Q Consensus 509 ~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~----~~~~~l 583 (786)
+..++||+|+||+||+|++. +++.||||++.... ......+.|.+|++++++++|||||++++++.. ++..|+
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~l 106 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRK--LTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGG--SCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhh--CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEE
Confidence 56678999999999999865 68899999986532 223456789999999999999999999999864 356799
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCC-CCcEEEeccccceec
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDL-EYEARVSDFGTAKLL 662 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~-~~~~kl~Dfg~a~~~ 662 (786)
|||||++|+|.+++.+. +.+++..+..++.||+.||+|||++ .++|+||||||+|||++. ++.+||+|||+|+..
T Consensus 107 vmEy~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~ 182 (290)
T 3fpq_A 107 VTELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeC
Confidence 99999999999999864 5789999999999999999999998 113999999999999984 799999999999864
Q ss_pred CCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhh
Q 047901 663 KPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAM 742 (786)
Q Consensus 663 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 742 (786)
.. ......+||+.|||| |++. +.|+.++|||||||++|||+||+.||..... .......+
T Consensus 183 ~~--~~~~~~~GTp~YmAP----------E~~~-~~y~~~~DiwSlGvilyelltg~~Pf~~~~~-------~~~~~~~i 242 (290)
T 3fpq_A 183 RA--SFAKAVIGTPEFMAP----------EMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQN-------AAQIYRRV 242 (290)
T ss_dssp CT--TSBEESCSSCCCCCG----------GGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-------HHHHHHHH
T ss_pred CC--CccCCcccCccccCH----------HHcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCc-------HHHHHHHH
Confidence 32 334567899999999 5554 4699999999999999999999999864221 11112222
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 743 LDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
..... |.......+.++.++|.+||.+||++|||++|+++
T Consensus 243 ~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 243 TSGVK--PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp TTTCC--CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HcCCC--CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 22211 11112222345889999999999999999999986
No 14
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.1e-50 Score=425.95 Aligned_cols=246 Identities=22% Similarity=0.230 Sum_probs=200.1
Q ss_pred ccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeEE
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVV 584 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 584 (786)
+.|+..++||+|+||+||+|+.+ +|+.||||+++.... ..+|+.+++.++|||||++++++.+++..|+|
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~---------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~iv 128 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF---------RVEELVACAGLSSPRIVPLYGAVREGPWVNIF 128 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh---------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 46888889999999999999865 689999999975211 23699999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCC-cEEEeccccceecC
Q 047901 585 YEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEY-EARVSDFGTAKLLK 663 (786)
Q Consensus 585 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~-~~kl~Dfg~a~~~~ 663 (786)
||||+||+|.++++.. +.+++..+..++.||+.||+|||++ +|+||||||+|||++.++ .+||+|||+|+...
T Consensus 129 mEy~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~ 202 (336)
T 4g3f_A 129 MELLEGGSLGQLIKQM---GCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQ 202 (336)
T ss_dssp ECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC-
T ss_pred EeccCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEcc
Confidence 9999999999999864 5799999999999999999999999 999999999999999987 69999999999876
Q ss_pred CCCC-----cceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhh
Q 047901 664 PNSS-----NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIE 738 (786)
Q Consensus 664 ~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~ 738 (786)
.... .....+||+.|||| |++.+..|+.++||||+||++|||+||+.||...... ..
T Consensus 203 ~~~~~~~~~~~~~~~GT~~YmAP----------E~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~--------~~ 264 (336)
T 4g3f_A 203 PDGLGKSLLTGDYIPGTETHMAP----------EVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG--------PL 264 (336)
T ss_dssp -----------CCCCCCGGGCCH----------HHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCS--------CC
T ss_pred CCCcccceecCCccccCccccCH----------HHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH--------HH
Confidence 4322 12345799999999 8888889999999999999999999999999753321 11
Q ss_pred hhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHh
Q 047901 739 FNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQL 785 (786)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 785 (786)
...+.....+. ...+...+..+.+++.+||.+||++|||+.|+++.
T Consensus 265 ~~~i~~~~~~~-~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~ 310 (336)
T 4g3f_A 265 CLKIASEPPPI-REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRK 310 (336)
T ss_dssp HHHHHHSCCGG-GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHcCCCCc-hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence 12222221110 00111233458899999999999999999999864
No 15
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=3.3e-49 Score=474.72 Aligned_cols=418 Identities=22% Similarity=0.222 Sum_probs=274.6
Q ss_pred CeEEEEcCCCCCcccCCcCccCCCCCCcEEECCCCCc-cccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEe
Q 047901 2 RVNSINLTSTGLKGTLQEFSFSSFPHLAYLDLSINGF-FGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLD 80 (786)
Q Consensus 2 ~~~~l~l~~~~l~~~l~~~~f~~l~~L~~L~L~~n~i-~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 80 (786)
+++.|+|++|.+. .+...+|.++++|++|||++|.+ ..+.|.+|.++++|++|+|++|+|+++.|.+|..+++|++|+
T Consensus 25 ~l~~LdLs~N~i~-~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 103 (844)
T 3j0a_A 25 TTERLLLSFNYIR-TVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELR 103 (844)
T ss_dssp TCCEEEEESCCCC-EECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEE
T ss_pred CcCEEECCCCcCC-ccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEee
Confidence 5789999999987 45555899999999999999954 445688999999999999999999988899999999999999
Q ss_pred CCCccCccc-CCC--CCCCCCCcEEEccCCcCcccCc-hhhcccCCcceeccccccccccCChhhhcc--Cccceeeccc
Q 047901 81 LSLNQFSGT-FPP--ICNLSNLKYISLHNNKLSGSIP-EEIGNLMKLSYLMLDTNQFTGQLPRNICRS--GLLEILTVND 154 (786)
Q Consensus 81 Ls~N~l~~~-~~~--~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~--~~L~~L~l~~ 154 (786)
|++|++++. +.. +..+++|++|+|++|++++..+ ..|+++++|++|+|++|.+++..+..+..+ ++|+.|+++.
T Consensus 104 Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~ 183 (844)
T 3j0a_A 104 LYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAA 183 (844)
T ss_dssp CTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECC
T ss_pred CcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCC
Confidence 999999873 333 8899999999999999987755 579999999999999999988888888776 6666666666
Q ss_pred ccccCCCC-CcCCC------------------------------------------------------------------
Q 047901 155 NHFLGSIP-NLRNC------------------------------------------------------------------ 167 (786)
Q Consensus 155 N~l~~~~~-~l~~l------------------------------------------------------------------ 167 (786)
|.+.+..+ .+..+
T Consensus 184 n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l 263 (844)
T 3j0a_A 184 NSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGL 263 (844)
T ss_dssp SBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTT
T ss_pred CccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhcc
Confidence 66654322 12222
Q ss_pred --CCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEE
Q 047901 168 --RSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVL 245 (786)
Q Consensus 168 --~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 245 (786)
++|+.|++++|.++++.+..|..+++|++|+|++|+|+++.+..|.++++|++|+|++|+++++.|..|.++++|+.|
T Consensus 264 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 343 (844)
T 3j0a_A 264 ARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYI 343 (844)
T ss_dssp TTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEE
T ss_pred ccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEE
Confidence 345555555555555555556666666666666666666556666666666666666666665555566666666666
Q ss_pred EeecccccccCCCCcccccccccccccccccCCCCc----------------------------------------cccc
Q 047901 246 DLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLP----------------------------------------RALG 285 (786)
Q Consensus 246 ~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~----------------------------------------~~~~ 285 (786)
+|++|.+.+..+..|..+++|+.|+|++|.++++.. ..+.
T Consensus 344 ~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~ 423 (844)
T 3j0a_A 344 DLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLL 423 (844)
T ss_dssp ECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHT
T ss_pred ECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhh
Confidence 666666655555556666666666666665553211 0011
Q ss_pred cCCcCceeccccccccccchh-hhhcccCCcEEEecccccC-----CCcchHHhhhcCcCeeeccCCccCCCCCcccccc
Q 047901 286 LLTELEYFDLSSNRLNNSILE-ALGFMFKLFYLNFSHNQFS-----QEIPEDLALLAHLSELDLSHNLFKGSIPSRICNL 359 (786)
Q Consensus 286 ~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~-----~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 359 (786)
.+++|+.|+|++|+++.+... .+..+++|+.|+|++|.++ +..+..|..+++|+.|+|++|+|++..|..|.++
T Consensus 424 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 503 (844)
T 3j0a_A 424 RVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHL 503 (844)
T ss_dssp TCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSC
T ss_pred cCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccch
Confidence 222333333333333222111 1222333333344444333 1222345556666666666666666666666666
Q ss_pred cccceeccccccccccCCcccccCCCceEEeccCCcccccCCCCCccccCCCccccCCCCCCCCC
Q 047901 360 ESLEKLNLSHNNISGQIPACFIGMSGLLSIDISYNELRGPIPNSTVFRNAPRESFLGNNFSTFYG 424 (786)
Q Consensus 360 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~~~~~ 424 (786)
++|+.|+|++|+|+++.|..+. ++|+.||+++|++++..|.. +.......+.+|++.|.|.
T Consensus 504 ~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 504 TALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV--FVSLSVLDITHNKFICECE 564 (844)
T ss_dssp CSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC--CSSCCEEEEEEECCCCSSS
T ss_pred hhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhH--hCCcCEEEecCCCcccccc
Confidence 6666666666666665555554 56666666666666666544 5566677888999977664
No 16
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=9.6e-51 Score=421.38 Aligned_cols=249 Identities=23% Similarity=0.300 Sum_probs=202.6
Q ss_pred ccCccceeeccccCceEEEEEcC----CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCee
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKLP----SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHS 581 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~ 581 (786)
++|++.+.||+|+||+||+|+.. .++.||||++..... .......+.+|++++++++|||||++++++.+++..
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~--~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 101 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATL--KVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKL 101 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEE--EEEECC------CCCCCCCCTTEECEEEEEEETTEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHc--ChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEE
Confidence 57999999999999999999752 467899999975321 112234678899999999999999999999999999
Q ss_pred eEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEecccccee
Q 047901 582 FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKL 661 (786)
Q Consensus 582 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~ 661 (786)
|+|||||+||+|.+++.+. +.+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+|+.
T Consensus 102 ~ivmEy~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~ 175 (304)
T 3ubd_A 102 YLILDFLRGGDLFTRLSKE---VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKE 175 (304)
T ss_dssp EEEECCCTTCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred EEEEEcCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEeccccccee
Confidence 9999999999999999865 5799999999999999999999999 999999999999999999999999999997
Q ss_pred cCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhh
Q 047901 662 LKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNA 741 (786)
Q Consensus 662 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 741 (786)
...........+||+.|||| |++.+..|+.++||||+||++|||+||+.||...+ ..+....
T Consensus 176 ~~~~~~~~~~~~GT~~YmAP----------E~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~--------~~~~~~~ 237 (304)
T 3ubd_A 176 SIDHEKKAYSFCGTVEYMAP----------EVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD--------RKETMTM 237 (304)
T ss_dssp -----CCCCSCCCCGGGCCH----------HHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHH
T ss_pred ccCCCccccccccCcccCCH----------HHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC--------HHHHHHH
Confidence 66554555567899999999 88888999999999999999999999999987432 2333444
Q ss_pred hccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCH-----HHHHH
Q 047901 742 MLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTM-----QTVCQ 784 (786)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~-----~ev~~ 784 (786)
+.......|... +.++.+++.+||.+||++|||+ +|+++
T Consensus 238 i~~~~~~~p~~~----s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 238 ILKAKLGMPQFL----SPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp HHHCCCCCCTTS----CHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred HHcCCCCCCCcC----CHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 555555555433 3358899999999999999995 57654
No 17
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1e-49 Score=424.16 Aligned_cols=262 Identities=23% Similarity=0.356 Sum_probs=212.0
Q ss_pred HHHHHHHhccCccceeeccccCceEEEEEcCC------CCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCC-Ccccc
Q 047901 498 YEEIIRRTKDFDAKYCIGKGEHRSVYRAKLPS------GDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH-RNIVK 570 (786)
Q Consensus 498 ~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-pniv~ 570 (786)
..+|+...++|++.+.||+|+||+||+|++.. ++.||||++... ......+.|.+|+++|++++| ||||+
T Consensus 56 ~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~---~~~~~~~~~~~E~~il~~l~hhpnIV~ 132 (353)
T 4ase_A 56 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG---ATHSEHRALMSELKILIHIGHHLNVVN 132 (353)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTT---CCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccc---cChHHHHHHHHHHHHHHHcCCCCcEEE
Confidence 34555556789999999999999999998542 357999999752 233456789999999999975 99999
Q ss_pred eeeEEec-CCeeeEEEeccCCCCHHHHhhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEc
Q 047901 571 FYGFCSH-VRHSFVVYEYINRGSLATVLSNNF-------------ASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHR 636 (786)
Q Consensus 571 l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~-------------~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHr 636 (786)
++|+|.. ++..++|||||++|+|.++++... ....+++.++..++.|||.||+|||++ +||||
T Consensus 133 l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHR 209 (353)
T 4ase_A 133 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 209 (353)
T ss_dssp EEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred EEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecC
Confidence 9999965 456899999999999999997532 134589999999999999999999999 99999
Q ss_pred CCCCCceeeCCCCcEEEeccccceecCCCCCc--ceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHH
Q 047901 637 DISSNNVLLDLEYEARVSDFGTAKLLKPNSSN--WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALE 714 (786)
Q Consensus 637 dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~e 714 (786)
||||+|||++.++.+||+|||+|+........ .....||+.|||| |++.+..|+.++|||||||++||
T Consensus 210 DLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAP----------E~l~~~~y~~ksDVwS~Gv~l~E 279 (353)
T 4ase_A 210 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP----------ETIFDRVYTIQSDVWSFGVLLWE 279 (353)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCH----------HHHHHCCCCHHHHHHHHHHHHHH
T ss_pred ccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCH----------HHHhcCCCCCcccEeehHHHHHH
Confidence 99999999999999999999999977654332 2346799999999 88889999999999999999999
Q ss_pred HHh-CCCCCCccccccCCCcchhhhhhhhcc-CCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 715 VIK-GKHPGDFLSLFSSSSSSINIEFNAMLD-HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 715 llt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
|+| |+.||..... .......+.+ .+...|.... .++.++|..||+.||++||||+||++.|
T Consensus 280 l~t~G~~Pf~~~~~-------~~~~~~~i~~g~~~~~p~~~~----~~~~~li~~c~~~dP~~RPt~~eil~~L 342 (353)
T 4ase_A 280 IFSLGASPYPGVKI-------DEEFCRRLKEGTRMRAPDYTT----PEMYQTMLDCWHGEPSQRPTFSELVEHL 342 (353)
T ss_dssp HTTTSCCSSTTCCC-------SHHHHHHHHHTCCCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHhCCCCCCCCCCH-------HHHHHHHHHcCCCCCCCccCC----HHHHHHHHHHcCcChhHCcCHHHHHHHH
Confidence 998 9999875321 1111122222 2334444333 3588999999999999999999999764
No 18
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.1e-48 Score=454.70 Aligned_cols=419 Identities=21% Similarity=0.136 Sum_probs=342.2
Q ss_pred CeEEEEcCCCCCcccCCcCccCCCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeC
Q 047901 2 RVNSINLTSTGLKGTLQEFSFSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDL 81 (786)
Q Consensus 2 ~~~~l~l~~~~l~~~l~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 81 (786)
+++.|+|++|.+. .++...|.++++|++|+|++|+++++.|.+|.++++|++|+|++|+|+++.|.+|+.+++|++|+|
T Consensus 33 ~l~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 33 STKNIDLSFNPLK-ILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CcCEEECCCCCcC-EeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 5889999999998 566668999999999999999999999999999999999999999999888999999999999999
Q ss_pred CCccCcccCC-CCCCCCCCcEEEccCCcCccc-CchhhcccCCcceeccccccccccCChhhhccCccc----eeecccc
Q 047901 82 SLNQFSGTFP-PICNLSNLKYISLHNNKLSGS-IPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLE----ILTVNDN 155 (786)
Q Consensus 82 s~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~----~L~l~~N 155 (786)
++|++++.++ .+.++++|++|+|++|+++++ .|..|+++++|++|++++|++++..|..+..+.+|+ .|++++|
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n 191 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLN 191 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTC
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCC
Confidence 9999998774 599999999999999999864 588999999999999999999988887777666544 4666666
Q ss_pred cccCCCCCcC----------------------------------------------------------------------
Q 047901 156 HFLGSIPNLR---------------------------------------------------------------------- 165 (786)
Q Consensus 156 ~l~~~~~~l~---------------------------------------------------------------------- 165 (786)
.++++++...
T Consensus 192 ~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~ 271 (606)
T 3vq2_A 192 PIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYT 271 (606)
T ss_dssp CCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCC
T ss_pred CcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheecccc
Confidence 5554333221
Q ss_pred -----------CCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCcccccc-------------------CcCccCC
Q 047901 166 -----------NCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEI-------------------SSNWGKC 215 (786)
Q Consensus 166 -----------~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~-------------------~~~~~~l 215 (786)
.+++|+.|++++|.++.+. .+..+++|++|++++|++..++ +..+..+
T Consensus 272 ~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~--~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l 349 (606)
T 3vq2_A 272 NDFSDDIVKFHCLANVSAMSLAGVSIKYLE--DVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVAL 349 (606)
T ss_dssp TTCCGGGGSCGGGTTCSEEEEESCCCCCCC--CCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCCC
T ss_pred ccccccccccccCCCCCEEEecCccchhhh--hccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchhhccC
Confidence 2233333333333333221 3444445555555555543221 1245677
Q ss_pred CCccEEEccCcccCCC--CCccccCCccccEEEeecccccccCCCCcccccccccccccccccCCCCc-cccccCCcCce
Q 047901 216 HRLGTLIVSGNNITGR--IPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLP-RALGLLTELEY 292 (786)
Q Consensus 216 ~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~ 292 (786)
++|++|++++|++++. .|..+..+++|+.|+|++|.+.+ .|..|..+++|+.|++++|++.+..+ ..|..+++|+.
T Consensus 350 ~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 428 (606)
T 3vq2_A 350 PSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLY 428 (606)
T ss_dssp TTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCE
T ss_pred CCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCE
Confidence 7888888888888765 37788888999999999999885 55889999999999999999998877 68999999999
Q ss_pred eccccccccccchhhhhcccCCcEEEecccccCC-CcchHHhhhcCcCeeeccCCccCCCCCcccccccccceecccccc
Q 047901 293 FDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQ-EIPEDLALLAHLSELDLSHNLFKGSIPSRICNLESLEKLNLSHNN 371 (786)
Q Consensus 293 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 371 (786)
|++++|.+....+..|..+++|++|++++|.+++ ..|..|..+++|+.|+|++|++++..|..|.++++|+.|++++|+
T Consensus 429 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 508 (606)
T 3vq2_A 429 LDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNN 508 (606)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCc
Confidence 9999999999999999999999999999999987 478889999999999999999998889999999999999999999
Q ss_pred ccccCCcccccCCCceEEeccCCcccccCCCCCccc-cCCCccccCCCCCCCCC
Q 047901 372 ISGQIPACFIGMSGLLSIDISYNELRGPIPNSTVFR-NAPRESFLGNNFSTFYG 424 (786)
Q Consensus 372 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~-~~~~~~~~~n~~~~~~~ 424 (786)
+++..|..|.++++|+.|++++|++++.++....+. ......+.+|++.|.|.
T Consensus 509 l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 509 LLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp CSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred CCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 999999999999999999999999996554433332 35567889999966664
No 19
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=4.1e-48 Score=449.97 Aligned_cols=389 Identities=20% Similarity=0.188 Sum_probs=284.8
Q ss_pred EEEcCCCCCcccCCcCccCCCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCc
Q 047901 5 SINLTSTGLKGTLQEFSFSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLN 84 (786)
Q Consensus 5 ~l~l~~~~l~~~l~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 84 (786)
.++.++.++. .+|.. + -+++++|||++|.|+++.|..|.++++|++|+|++|+|+++.|.+|+.+++|++|+|++|
T Consensus 16 ~~~c~~~~l~-~iP~~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n 91 (606)
T 3t6q_A 16 TYNCENLGLN-EIPGT-L--PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTAN 91 (606)
T ss_dssp EEECTTSCCS-SCCTT-S--CTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred eEECCCCCcc-cCcCC-C--CCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCC
Confidence 5778888887 67763 2 247999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCC-CCCCCCCCcEEEccCCcCcccCchhhcccCCcceeccccccccccCChhhhccCccceeecccccccCCCCC
Q 047901 85 QFSGTFP-PICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPN 163 (786)
Q Consensus 85 ~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~ 163 (786)
++++..+ .|..+++|++|+|++|+++++.+..|.++++|++|++++|++++..+..+..+++|+.|++++|.+++..+.
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 171 (606)
T 3t6q_A 92 PLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKE 171 (606)
T ss_dssp CCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHH
T ss_pred cccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChh
Confidence 9998765 599999999999999999998889999999999999999999976656666799999999999999876543
Q ss_pred -cCCCCCCc--EEEccCcccccccCcccCCC-------------------------------------------------
Q 047901 164 -LRNCRSLV--RAHLGRNNLTGNISEDFGIY------------------------------------------------- 191 (786)
Q Consensus 164 -l~~l~~L~--~L~L~~N~l~~~~~~~f~~l------------------------------------------------- 191 (786)
+..+++|+ .|++++|.++++.+..|...
T Consensus 172 ~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l 251 (606)
T 3t6q_A 172 DMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGL 251 (606)
T ss_dssp HHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGG
T ss_pred hhhhhcccceeEEecCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchh
Confidence 66777777 77788887777666555321
Q ss_pred --CCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCCCCcccccccccc
Q 047901 192 --PNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKL 269 (786)
Q Consensus 192 --~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L 269 (786)
.+|++|++++|+++++.+..|..+++|++|++++|+++ .+|..+..+++|++|++++|.+++..|..+..+++|+.|
T Consensus 252 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 330 (606)
T 3t6q_A 252 CEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHL 330 (606)
T ss_dssp GGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEE
T ss_pred hcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEE
Confidence 04566666666666666666666666666666666666 455566666666666666666666656666666666666
Q ss_pred cccccccCCC-CccccccCCcCceeccccccccccc--hhhhhcccCCcEEEecccccCCCcchHHhhhcCcCeeeccCC
Q 047901 270 ILRGNQLSGH-LPRALGLLTELEYFDLSSNRLNNSI--LEALGFMFKLFYLNFSHNQFSQEIPEDLALLAHLSELDLSHN 346 (786)
Q Consensus 270 ~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 346 (786)
++++|.+.+. .+..+..+++|+.|++++|.+..+. +..+..+++|++|++++|.+++..|..|..+++|+.|++++|
T Consensus 331 ~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 410 (606)
T 3t6q_A 331 SIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFT 410 (606)
T ss_dssp ECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTC
T ss_pred ECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCC
Confidence 6666666533 2334666666666666666666554 455566666666666666666555556666666666666666
Q ss_pred ccCCCCCc-ccccccccceeccccccccccCCcccccCCCceEEeccCCcccc
Q 047901 347 LFKGSIPS-RICNLESLEKLNLSHNNISGQIPACFIGMSGLLSIDISYNELRG 398 (786)
Q Consensus 347 ~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 398 (786)
++++..+. .|..+++|+.|++++|.+++..|..|.++++|+.|++++|++.+
T Consensus 411 ~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 463 (606)
T 3t6q_A 411 RLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPK 463 (606)
T ss_dssp CEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGG
T ss_pred cCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCc
Confidence 66544432 35556666666666666665556566666666666666666554
No 20
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.1e-49 Score=415.89 Aligned_cols=259 Identities=24% Similarity=0.356 Sum_probs=196.5
Q ss_pred ccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHH--HHHHHHhhcCCCcccceeeEEecCC----
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFL--NEIKALTKIRHRNIVKFYGFCSHVR---- 579 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~--~e~~~l~~l~hpniv~l~~~~~~~~---- 579 (786)
++|...++||+|+||+||+|++ +|+.||||++.. ...+.+. .|+..+.+++|||||+++|+|.+++
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~-------~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~ 74 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSS-------REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 74 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECG-------GGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECc-------cchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCce
Confidence 4688889999999999999998 488999999854 1223333 4555567889999999999997653
Q ss_pred eeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhC-----CCCCeEEcCCCCCceeeCCCCcEEEe
Q 047901 580 HSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHD-----CFPPIVHRDISSNNVLLDLEYEARVS 654 (786)
Q Consensus 580 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~-----~~~~ivHrdlk~~Nill~~~~~~kl~ 654 (786)
..|+|||||++|+|.++++.. .++|..+.+++.|+|.||+|||++ ..++|+||||||+|||++.++++||+
T Consensus 75 ~~~lV~Ey~~~gsL~~~l~~~----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~ 150 (303)
T 3hmm_A 75 QLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 150 (303)
T ss_dssp EEEEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEEC
T ss_pred EEEEEecCCCCCcHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEE
Confidence 579999999999999999753 589999999999999999999976 24589999999999999999999999
Q ss_pred ccccceecCCCCCc----ceeeccCccccCCCCCCCCchHHHHhhhc------CcCcccchHHHHHHHHHHHhCCCCCCc
Q 047901 655 DFGTAKLLKPNSSN----WTELVGTFGYVAPAHGNIGLHLAELAYTM------KITEKCDVYSFGVLALEVIKGKHPGDF 724 (786)
Q Consensus 655 Dfg~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~e~~~~~------~~~~~sDvwslGvil~elltg~~Pf~~ 724 (786)
|||+|+........ ....+||+.|||| |++.+. .++.|+|||||||++|||+||++||..
T Consensus 151 DFGla~~~~~~~~~~~~~~~~~~GT~~ymAP----------E~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~ 220 (303)
T 3hmm_A 151 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAP----------EVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 220 (303)
T ss_dssp CCTTCEEEETTTTEESCC-----CCGGGCCH----------HHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTB
T ss_pred eCCCCccccCCCCceeeecccccccccccCH----------HHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCc
Confidence 99999887644322 2345899999999 555432 478899999999999999999988754
Q ss_pred cccccC-------CCcchhhhhhhhccCCCC--CCChh-HHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 725 LSLFSS-------SSSSINIEFNAMLDHRLP--HPSLD-VQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 725 ~~~~~~-------~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
...... ...........+...... .|... ..+....+.++|.+||+.||++||||.||++.|
T Consensus 221 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L 292 (303)
T 3hmm_A 221 HEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTL 292 (303)
T ss_dssp CCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHH
T ss_pred cccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHH
Confidence 332111 011112222222333222 22221 224556789999999999999999999999864
No 21
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=3.9e-48 Score=456.37 Aligned_cols=217 Identities=24% Similarity=0.210 Sum_probs=156.0
Q ss_pred cCcCccCCCCccEEEccCcccCCCCC-ccccCCccccEEEeecccccccCCCCcccccccccccccccccC--CCCcccc
Q 047901 208 ISSNWGKCHRLGTLIVSGNNITGRIP-PEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLS--GHLPRAL 284 (786)
Q Consensus 208 ~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~--~~~~~~~ 284 (786)
.+.+|..+++|+.|+|++|++++.+| ..|.++++|++|++++|++.+..+..|..+++|+.|++++|.+. +..|..|
T Consensus 397 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~ 476 (680)
T 1ziw_A 397 ESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPF 476 (680)
T ss_dssp CTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTT
T ss_pred ChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCccc
Confidence 33344444444444444444433222 34444444444444444444444445555555555555555554 3466778
Q ss_pred ccCCcCceeccccccccccchhhhhcccCCcEEEecccccCCCcc--------hHHhhhcCcCeeeccCCccCCCCCccc
Q 047901 285 GLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQEIP--------EDLALLAHLSELDLSHNLFKGSIPSRI 356 (786)
Q Consensus 285 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--------~~~~~l~~L~~L~L~~N~l~~~~~~~~ 356 (786)
..+++|+.|++++|+++.+++..|..+++|++|+|++|++++..+ ..|..+++|+.|+|++|+++...+..|
T Consensus 477 ~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~ 556 (680)
T 1ziw_A 477 QPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVF 556 (680)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred ccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHc
Confidence 888899999999999999888889999999999999999986432 237888999999999999996666679
Q ss_pred ccccccceeccccccccccCCcccccCCCceEEeccCCcccccCCCCC--ccccCCCccccCCCCCCCCC
Q 047901 357 CNLESLEKLNLSHNNISGQIPACFIGMSGLLSIDISYNELRGPIPNST--VFRNAPRESFLGNNFSTFYG 424 (786)
Q Consensus 357 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~--~~~~~~~~~~~~n~~~~~~~ 424 (786)
.++++|+.|+|++|+|+++.+..|.++++|+.|++++|++++..|..- .+.......+.+|+|.|.|.
T Consensus 557 ~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 557 KDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred ccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 999999999999999998888889999999999999999998766432 34566778899999966664
No 22
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=5.6e-49 Score=410.34 Aligned_cols=251 Identities=20% Similarity=0.387 Sum_probs=193.9
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCC----
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVR---- 579 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~---- 579 (786)
.++|+..+.||+|+||+||+|+.+ +++.||||++... ......+.+.+|+++|++++|||||++++++.+.+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~ 80 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLP---NRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEK 80 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEEC---SSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEecc---CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccc
Confidence 356999999999999999999865 7899999998652 23345578999999999999999999999986543
Q ss_pred --------eeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcE
Q 047901 580 --------HSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEA 651 (786)
Q Consensus 580 --------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~ 651 (786)
..|+|||||++|+|.+++.........++..++.++.||+.||+|||++ +|+||||||+|||++.++.+
T Consensus 81 ~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~v 157 (299)
T 4g31_A 81 LQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVV 157 (299)
T ss_dssp ------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCE
T ss_pred ccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcE
Confidence 3689999999999999998765555667888999999999999999999 99999999999999999999
Q ss_pred EEeccccceecCCCCCc------------ceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCC
Q 047901 652 RVSDFGTAKLLKPNSSN------------WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGK 719 (786)
Q Consensus 652 kl~Dfg~a~~~~~~~~~------------~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~ 719 (786)
||+|||+|+........ ....+||+.|||| |++.+..|+.++||||+||++|||++
T Consensus 158 Kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAP----------E~~~~~~y~~~~DiwSlGvilyell~-- 225 (299)
T 4g31_A 158 KVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSP----------EQIHGNSYSHKVDIFSLGLILFELLY-- 225 (299)
T ss_dssp EECCCCCC--------------------------CCCTTSCH----------HHHTTCCCCTHHHHHHHHHHHHHHHS--
T ss_pred EEccCccceecCCCccccccccccccccccCCcccCccccCH----------HHHcCCCCCCHHHHHHHHHHHHHHcc--
Confidence 99999999877543221 2335799999999 88888899999999999999999996
Q ss_pred CCCCccccccCCCcchhhhhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 720 HPGDFLSLFSSSSSSINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 720 ~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
||.... ............. .|+ ..........+++.+||++||++|||+.|+++
T Consensus 226 -Pf~~~~-------~~~~~~~~~~~~~--~p~-~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 226 -PFSTQM-------ERVRTLTDVRNLK--FPP-LFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp -CCSSHH-------HHHHHHHHHHTTC--CCH-HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -CCCCcc-------HHHHHHHHHhcCC--CCC-CCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 765311 1111112222222 222 23344456788999999999999999999986
No 23
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.1e-48 Score=452.53 Aligned_cols=410 Identities=20% Similarity=0.257 Sum_probs=289.1
Q ss_pred CCeEEEEcCCCCCcccCCcCccCCCCCCcEEECCCCCcc------c---------------------------cCchhcc
Q 047901 1 GRVNSINLTSTGLKGTLQEFSFSSFPHLAYLDLSINGFF------G---------------------------TLPPQVR 47 (786)
Q Consensus 1 g~~~~l~l~~~~l~~~l~~~~f~~l~~L~~L~L~~n~i~------~---------------------------~~~~~~~ 47 (786)
|+|+.|+|+++++.|+++. +|..+++|++|||++|.+. + ..|..+.
T Consensus 81 ~~V~~L~L~~~~l~g~lp~-~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~ 159 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPD-AIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFS 159 (636)
T ss_dssp CCEEEEECTTSCCEEEECG-GGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSC
T ss_pred CCEEEEEecCcccCCcCCh-HHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHH
Confidence 7899999999999999997 8999999999999999651 1 0000000
Q ss_pred -------------------CCCCCCEEeCc--CCcccccCCccccCCCCCCEEeCCCccCcc------------------
Q 047901 48 -------------------NLSKLKYLDLS--ENELSGKIPPEIGLLTHLFSLDLSLNQFSG------------------ 88 (786)
Q Consensus 48 -------------------~l~~L~~L~L~--~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~------------------ 88 (786)
....++.+.+. +|++++ +|.+|+.+++|++|+|++|++++
T Consensus 160 ~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ 238 (636)
T 4eco_A 160 DLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQY 238 (636)
T ss_dssp HHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHH
T ss_pred HHHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhccc
Confidence 11122222222 567776 67777777777777777777777
Q ss_pred cCCCCC--CCCCCcEEEccCCcCcccCchhhcccCCcceecccccc-ccc-cCChhhhcc------Cccceeeccccccc
Q 047901 89 TFPPIC--NLSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQ-FTG-QLPRNICRS------GLLEILTVNDNHFL 158 (786)
Q Consensus 89 ~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~-~~~~~~~~~------~~L~~L~l~~N~l~ 158 (786)
++..+. ++++|++|+|++|++.+..|..|.++++|++|+|++|+ +++ .+|..+..+ ++|+.|++++|.++
T Consensus 239 ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~ 318 (636)
T 4eco_A 239 KTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK 318 (636)
T ss_dssp TTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS
T ss_pred CchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC
Confidence 566666 77777777777777777777777777777777777776 776 677777665 77777777777777
Q ss_pred CCCC--CcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCC-ccEEEccCcccCCCCCcc
Q 047901 159 GSIP--NLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHR-LGTLIVSGNNITGRIPPE 235 (786)
Q Consensus 159 ~~~~--~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~ 235 (786)
.++. .+.++++|+.|++++|++++..| .|..+++|++|+|++|+++ ..|..|..+++ |++|++++|+++ .+|..
T Consensus 319 ~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~ 395 (636)
T 4eco_A 319 TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNI 395 (636)
T ss_dssp SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSC
T ss_pred ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchh
Confidence 5555 57777777777777777775555 7777777777777777777 45556777777 777777777777 55666
Q ss_pred ccCCc--cccEEEeecccccccCCCCcc-------cccccccccccccccCCCCccccccCCcCceeccccccccccchh
Q 047901 236 IGNSS--QLHVLDLSSNHIAGEIPMELG-------RLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSILE 306 (786)
Q Consensus 236 ~~~l~--~L~~L~Ls~N~i~~~~~~~~~-------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 306 (786)
+..++ +|+.|+|++|.+.+..|..|. .+++|+.|+|++|+++.+++..+..+++|+.|+|++|+++.++..
T Consensus 396 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~ 475 (636)
T 4eco_A 396 FDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKN 475 (636)
T ss_dssp CCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSS
T ss_pred hhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHH
Confidence 65544 777777777777777777666 666777777777777766666666677777777777777766666
Q ss_pred hhhccc-------CCcEEEecccccCCCcchHHh--hhcCcCeeeccCCccCCCCCcccccccccceecc------cccc
Q 047901 307 ALGFMF-------KLFYLNFSHNQFSQEIPEDLA--LLAHLSELDLSHNLFKGSIPSRICNLESLEKLNL------SHNN 371 (786)
Q Consensus 307 ~~~~l~-------~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L------~~N~ 371 (786)
.+.... +|++|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+.++++|+.|+| ++|+
T Consensus 476 ~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~ 553 (636)
T 4eco_A 476 SLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNR 553 (636)
T ss_dssp SSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCB
T ss_pred HhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCc
Confidence 555443 7777777777777 4555554 77777777777777775 6777777777777777 4566
Q ss_pred ccccCCcccccCCCceEEeccCCcccccCCCCCccccCCCccccCCCC
Q 047901 372 ISGQIPACFIGMSGLLSIDISYNELRGPIPNSTVFRNAPRESFLGNNF 419 (786)
Q Consensus 372 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~ 419 (786)
+.+.+|..|..+++|+.|++++|++ +.+|.. .+.......+.+|++
T Consensus 554 l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~-~~~~L~~L~Ls~N~l 599 (636)
T 4eco_A 554 TLREWPEGITLCPSLTQLQIGSNDI-RKVNEK-ITPNISVLDIKDNPN 599 (636)
T ss_dssp CCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC-CCTTCCEEECCSCTT
T ss_pred ccccChHHHhcCCCCCEEECCCCcC-CccCHh-HhCcCCEEECcCCCC
Confidence 7777777777777777777777777 444543 224555566666665
No 24
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.9e-46 Score=440.40 Aligned_cols=396 Identities=25% Similarity=0.275 Sum_probs=264.9
Q ss_pred CeEEEEcCCCCCcccCCcCccCCCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeC
Q 047901 2 RVNSINLTSTGLKGTLQEFSFSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDL 81 (786)
Q Consensus 2 ~~~~l~l~~~~l~~~l~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 81 (786)
+|+.|+|++|++. .++...|.++++|++|||++|.++++.|..|.++++|++|+|++|+|+.+.+.+|+.+++|++|+|
T Consensus 26 ~l~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 26 NITVLNLTHNQLR-RLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TCSEEECCSSCCC-CCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCcEEECCCCCCC-CcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 5788999999887 466667899999999999999998888888999999999999999998777778899999999999
Q ss_pred CCccCcccCC-CCCCCCCCcEEEccCCcCcccCchhhcccCCcceeccccccccccCChhhh--ccCccceeeccccccc
Q 047901 82 SLNQFSGTFP-PICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNIC--RSGLLEILTVNDNHFL 158 (786)
Q Consensus 82 s~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~~~~L~~L~l~~N~l~ 158 (786)
++|+++++++ .|.++++|++|+|++|++++..+..|.++++|++|++++|++++..+..+. .+++|+.|++++|.++
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~ 184 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIK 184 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCC
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCccc
Confidence 9999888775 488889999999999998888888888888888888888888876666554 3467777777777776
Q ss_pred CCCCC----------------------------------------------------cCCCC--CCcEEEccCccccccc
Q 047901 159 GSIPN----------------------------------------------------LRNCR--SLVRAHLGRNNLTGNI 184 (786)
Q Consensus 159 ~~~~~----------------------------------------------------l~~l~--~L~~L~L~~N~l~~~~ 184 (786)
+..+. +.+++ +|+.|++++|+++++.
T Consensus 185 ~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~ 264 (680)
T 1ziw_A 185 EFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVG 264 (680)
T ss_dssp CBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEEC
T ss_pred ccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccC
Confidence 54432 22222 2666666666666666
Q ss_pred CcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCC---------CCCccccCCccccEEEeeccccccc
Q 047901 185 SEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITG---------RIPPEIGNSSQLHVLDLSSNHIAGE 255 (786)
Q Consensus 185 ~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~---------~~~~~~~~l~~L~~L~Ls~N~i~~~ 255 (786)
+..|..+++|++|+|++|++.++.+..|.++++|+.|++++|...+ +....|..+++|+.|++++|.+.+.
T Consensus 265 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~ 344 (680)
T 1ziw_A 265 NDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGI 344 (680)
T ss_dssp TTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCC
T ss_pred cccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCC
Confidence 6666666666666666666666555544444433333333322110 0011334444555555555555554
Q ss_pred CCCCccccccccc----------------------------ccccccccCCCCccccccCCcCceeccccccccc-cchh
Q 047901 256 IPMELGRLISLNK----------------------------LILRGNQLSGHLPRALGLLTELEYFDLSSNRLNN-SILE 306 (786)
Q Consensus 256 ~~~~~~~l~~L~~----------------------------L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~ 306 (786)
.+..|.++++|+. |++++|+++++.|..|..+++|+.|++++|.+.+ ++..
T Consensus 345 ~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 424 (680)
T 1ziw_A 345 KSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQ 424 (680)
T ss_dssp CTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSG
T ss_pred ChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcc
Confidence 4444444444333 3344445555556667777777777777777764 3445
Q ss_pred hhhcccCCcEEEecccccCCCcchHHhhhcCcCeeeccCCccC--CCCCcccccccccceeccccccccccCCcccccCC
Q 047901 307 ALGFMFKLFYLNFSHNQFSQEIPEDLALLAHLSELDLSHNLFK--GSIPSRICNLESLEKLNLSHNNISGQIPACFIGMS 384 (786)
Q Consensus 307 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 384 (786)
.|..+++|++|++++|++++..+..|..+++|+.|++++|.++ +..|..|.++++|+.|++++|+|+++.+..|.+++
T Consensus 425 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~ 504 (680)
T 1ziw_A 425 EWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLE 504 (680)
T ss_dssp GGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred cccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhcccc
Confidence 6667777777777777766655556666666666666666554 34455556666666666666666655555555666
Q ss_pred CceEEeccCCcccc
Q 047901 385 GLLSIDISYNELRG 398 (786)
Q Consensus 385 ~L~~L~l~~N~l~~ 398 (786)
+|+.|++++|++++
T Consensus 505 ~L~~L~Ls~N~l~~ 518 (680)
T 1ziw_A 505 KLEILDLQHNNLAR 518 (680)
T ss_dssp TCCEEECCSSCCGG
T ss_pred ccCEEeCCCCCccc
Confidence 66666666666554
No 25
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.8e-47 Score=437.14 Aligned_cols=417 Identities=21% Similarity=0.198 Sum_probs=334.8
Q ss_pred CeEEEEcCCCCCcccCCcCccCCCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeC
Q 047901 2 RVNSINLTSTGLKGTLQEFSFSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDL 81 (786)
Q Consensus 2 ~~~~l~l~~~~l~~~l~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 81 (786)
.++.|+|++|++. .++..+|.++++|++|||++|+++++.+..|.++++|++|+|++|+++.+.|.+|..+++|++|+|
T Consensus 29 ~l~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 29 STKNLDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SCCEEECCSCCCC-EECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred cccEEEccCCccC-ccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 4789999999998 566668999999999999999999999999999999999999999999888899999999999999
Q ss_pred CCccCcccCC-CCCCCCCCcEEEccCCcCccc-CchhhcccCCcceeccccccccccCChhhhccCcc----ceeecccc
Q 047901 82 SLNQFSGTFP-PICNLSNLKYISLHNNKLSGS-IPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLL----EILTVNDN 155 (786)
Q Consensus 82 s~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L----~~L~l~~N 155 (786)
++|+++++++ .+..+++|++|+|++|+++++ .|..|.++++|++|++++|++++..+..+..+.+| +.|++++|
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCC
Confidence 9999998876 589999999999999999975 58999999999999999999998888888888888 88899998
Q ss_pred cccCCCCCcCCCCCCcEEEccCc---------------------------------------------------------
Q 047901 156 HFLGSIPNLRNCRSLVRAHLGRN--------------------------------------------------------- 178 (786)
Q Consensus 156 ~l~~~~~~l~~l~~L~~L~L~~N--------------------------------------------------------- 178 (786)
.+.+..+......+|+.|++++|
T Consensus 188 ~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~ 267 (570)
T 2z63_A 188 PMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYL 267 (570)
T ss_dssp CCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEET
T ss_pred CceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcc
Confidence 88765544222224444444443
Q ss_pred -ccccccCcccCCCCCCCEEeccCCccccccCcCccC--------------------CCCccEEEccCcccCCCCCcccc
Q 047901 179 -NLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGK--------------------CHRLGTLIVSGNNITGRIPPEIG 237 (786)
Q Consensus 179 -~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~--------------------l~~L~~L~L~~N~l~~~~~~~~~ 237 (786)
.+.+..+..|..+++|++|++++|.+.. .|..+.. +++|+.|++++|.+.+..+. .
T Consensus 268 ~~~~~~~~~~~~~l~~L~~L~l~~~~l~~-l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~--~ 344 (570)
T 2z63_A 268 DYYLDDIIDLFNCLTNVSSFSLVSVTIER-VKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSE--V 344 (570)
T ss_dssp TEEESCSTTTTGGGTTCSEEEEESCEECS-CCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCC--C
T ss_pred hhhhhhchhhhcCcCcccEEEecCccchh-hhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCcccccccc--c
Confidence 2222233444445555555555555543 3333333 44455555555554433332 5
Q ss_pred CCccccEEEeecccccccC--CCCcccccccccccccccccCCCCccccccCCcCceeccccccccccch-hhhhcccCC
Q 047901 238 NSSQLHVLDLSSNHIAGEI--PMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSIL-EALGFMFKL 314 (786)
Q Consensus 238 ~l~~L~~L~Ls~N~i~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L 314 (786)
.+++|+.|++++|.+++.. +..+..+++|+.|++++|.+.+..+. +..+++|+.|++++|.+....+ ..|..+++|
T Consensus 345 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L 423 (570)
T 2z63_A 345 DLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNL 423 (570)
T ss_dssp BCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTC
T ss_pred cCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCC
Confidence 6788888888888887554 56778888999999999998866555 8889999999999999887755 578889999
Q ss_pred cEEEecccccCCCcchHHhhhcCcCeeeccCCccC-CCCCcccccccccceeccccccccccCCcccccCCCceEEeccC
Q 047901 315 FYLNFSHNQFSQEIPEDLALLAHLSELDLSHNLFK-GSIPSRICNLESLEKLNLSHNNISGQIPACFIGMSGLLSIDISY 393 (786)
Q Consensus 315 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 393 (786)
++|++++|.+++..|..|..+++|+.|+|++|.++ +.+|..|..+++|+.|++++|++++..|..|..+++|+.|++++
T Consensus 424 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 503 (570)
T 2z63_A 424 IYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMAS 503 (570)
T ss_dssp CEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCC
Confidence 99999999999888889999999999999999997 56888999999999999999999999899999999999999999
Q ss_pred CcccccCCCC-CccccCCCccccCCCCCCCC
Q 047901 394 NELRGPIPNS-TVFRNAPRESFLGNNFSTFY 423 (786)
Q Consensus 394 N~l~~~~p~~-~~~~~~~~~~~~~n~~~~~~ 423 (786)
|++++.+|.. ..+.......+.+|++.+.|
T Consensus 504 n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 534 (570)
T 2z63_A 504 NQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 534 (570)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred CcCCCCCHHHhhcccCCcEEEecCCcccCCC
Confidence 9999877653 34456666788899985555
No 26
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=8.9e-47 Score=445.51 Aligned_cols=409 Identities=21% Similarity=0.239 Sum_probs=308.8
Q ss_pred CCeEEEEcCCCCCcccCCcCccCCCCCCcEEEC-CCCCccccCchh----------------------------------
Q 047901 1 GRVNSINLTSTGLKGTLQEFSFSSFPHLAYLDL-SINGFFGTLPPQ---------------------------------- 45 (786)
Q Consensus 1 g~~~~l~l~~~~l~~~l~~~~f~~l~~L~~L~L-~~n~i~~~~~~~---------------------------------- 45 (786)
|+|+.|+|+++++.|.+|+ +|.++++|++||| ++|.+.+..+-.
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~-~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s 401 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPD-AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLS 401 (876)
T ss_dssp SCEEEEECTTTCCEEEECG-GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSC
T ss_pred CCEEEEECccCCCCCcCch-HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhh
Confidence 6899999999999999997 7999999999999 888775542211
Q ss_pred -----------------ccCCCCCCEEeCcC--CcccccCCccccCCCCCCEEeCCCccCcc------------------
Q 047901 46 -----------------VRNLSKLKYLDLSE--NELSGKIPPEIGLLTHLFSLDLSLNQFSG------------------ 88 (786)
Q Consensus 46 -----------------~~~l~~L~~L~L~~--N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~------------------ 88 (786)
......++.+.+.. |++++ +|..|+.+++|++|+|++|+|++
T Consensus 402 ~l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~ 480 (876)
T 4ecn_A 402 DLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQY 480 (876)
T ss_dssp HHHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHH
T ss_pred HHHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCccccccccccccccccc
Confidence 01122334444443 77776 67788888888888888888887
Q ss_pred cCCCCC--CCCCCcEEEccCCcCcccCchhhcccCCcceecccccc-ccc-cCChhhhccC-------ccceeecccccc
Q 047901 89 TFPPIC--NLSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQ-FTG-QLPRNICRSG-------LLEILTVNDNHF 157 (786)
Q Consensus 89 ~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~-~~~~~~~~~~-------~L~~L~l~~N~l 157 (786)
+|+.++ ++++|++|+|++|++.+..|..|.++++|++|+|++|+ +++ .+|..+..+. +|+.|+|++|.+
T Consensus 481 iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L 560 (876)
T 4ecn_A 481 ENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNL 560 (876)
T ss_dssp TTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCC
T ss_pred CChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcC
Confidence 666666 88888888888888887888888888888888888887 776 6777776665 888888888888
Q ss_pred cCCCC--CcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCC-ccEEEccCcccCCCCCc
Q 047901 158 LGSIP--NLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHR-LGTLIVSGNNITGRIPP 234 (786)
Q Consensus 158 ~~~~~--~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~ 234 (786)
+.++. .+.++++|+.|+|++|+|+.+ | .|..+++|++|+|++|+++ ..|..+..+++ |+.|+|++|+++ .+|.
T Consensus 561 ~~ip~~~~l~~L~~L~~L~Ls~N~l~~l-p-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~ 636 (876)
T 4ecn_A 561 EEFPASASLQKMVKLGLLDCVHNKVRHL-E-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPN 636 (876)
T ss_dssp CBCCCHHHHTTCTTCCEEECTTSCCCBC-C-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCS
T ss_pred CccCChhhhhcCCCCCEEECCCCCcccc-h-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCch
Confidence 86665 578888888888888888844 3 7888888888888888888 56666778887 888888888888 5677
Q ss_pred cccCCcc--ccEEEeecccccccCCCCc---c--cccccccccccccccCCCCccccccCCcCceeccccccccccchhh
Q 047901 235 EIGNSSQ--LHVLDLSSNHIAGEIPMEL---G--RLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSILEA 307 (786)
Q Consensus 235 ~~~~l~~--L~~L~Ls~N~i~~~~~~~~---~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 307 (786)
.+..++. |+.|+|++|++.+.+|... . .+++|+.|+|++|+++.+++..+..+++|+.|+|++|+++.++...
T Consensus 637 ~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~ 716 (876)
T 4ecn_A 637 IFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENS 716 (876)
T ss_dssp CCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTS
T ss_pred hhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHH
Confidence 7766654 8888888888876655322 2 3347888888888888666566667888888888888888776666
Q ss_pred hhcc-------cCCcEEEecccccCCCcchHHh--hhcCcCeeeccCCccCCCCCcccccccccceecccc------ccc
Q 047901 308 LGFM-------FKLFYLNFSHNQFSQEIPEDLA--LLAHLSELDLSHNLFKGSIPSRICNLESLEKLNLSH------NNI 372 (786)
Q Consensus 308 ~~~l-------~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~------N~l 372 (786)
+... ++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+|++ +|..+.++++|+.|+|++ |++
T Consensus 717 ~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l 794 (876)
T 4ecn_A 717 LKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRI 794 (876)
T ss_dssp SSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBC
T ss_pred hccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccc
Confidence 5543 37888888888887 5566665 78888888888888885 677777888888888865 777
Q ss_pred cccCCcccccCCCceEEeccCCcccccCCCCCccccCCCccccCCCC
Q 047901 373 SGQIPACFIGMSGLLSIDISYNELRGPIPNSTVFRNAPRESFLGNNF 419 (786)
Q Consensus 373 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~ 419 (786)
.+.+|..|.++++|+.|+|++|++ +.+|.. .+.......+.+|+.
T Consensus 795 ~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~-l~~~L~~LdLs~N~l 839 (876)
T 4ecn_A 795 LRQWPTGITTCPSLIQLQIGSNDI-RKVDEK-LTPQLYILDIADNPN 839 (876)
T ss_dssp CCCCCTTGGGCSSCCEEECCSSCC-CBCCSC-CCSSSCEEECCSCTT
T ss_pred cccChHHHhcCCCCCEEECCCCCC-CccCHh-hcCCCCEEECCCCCC
Confidence 778888888888888888888888 555554 234555556666665
No 27
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=8.5e-47 Score=438.94 Aligned_cols=388 Identities=18% Similarity=0.205 Sum_probs=319.0
Q ss_pred CCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCcccc----------------------------------
Q 047901 26 PHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIG---------------------------------- 71 (786)
Q Consensus 26 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~---------------------------------- 71 (786)
.+++.|+|++|++.+.+|.+|.+|++|++|+|++|.+. ..+..++
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~-~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~ 159 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEK-VNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFS 159 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGG-GTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSC
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccc-cCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHH
Confidence 57899999999999999999999999999999999762 1111111
Q ss_pred -------------------CCCCCCEEeCC--CccCcccCCCCCCCCCCcEEEccCCcCccc-----------------C
Q 047901 72 -------------------LLTHLFSLDLS--LNQFSGTFPPICNLSNLKYISLHNNKLSGS-----------------I 113 (786)
Q Consensus 72 -------------------~l~~L~~L~Ls--~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~-----------------~ 113 (786)
....++.+.+. .|++++++..++++++|++|+|++|++++. .
T Consensus 160 ~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~i 239 (636)
T 4eco_A 160 DLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITFVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYK 239 (636)
T ss_dssp HHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHHhhcCccccccccccccchhhhhhccccCCCccCCHHHhcccCCCEEECcCCccccccccccccccccchhcccC
Confidence 11123333333 578888777789999999999999999984 7
Q ss_pred chhhc--ccCCcceeccccccccccCChhhhccCccceeeccccc-ccC--CCCCcCCC------CCCcEEEccCccccc
Q 047901 114 PEEIG--NLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNH-FLG--SIPNLRNC------RSLVRAHLGRNNLTG 182 (786)
Q Consensus 114 ~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~-l~~--~~~~l~~l------~~L~~L~L~~N~l~~ 182 (786)
|..+. ++++|++|+|++|++.+.+|..+..+++|+.|++++|+ +++ ++..+.++ ++|+.|++++|+++.
T Consensus 240 p~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ 319 (636)
T 4eco_A 240 TEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKT 319 (636)
T ss_dssp TSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSS
T ss_pred chhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCc
Confidence 78888 99999999999999999999999999999999999998 876 44445554 899999999999994
Q ss_pred ccCc--ccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCcc-ccEEEeecccccccCCCC
Q 047901 183 NISE--DFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQ-LHVLDLSSNHIAGEIPME 259 (786)
Q Consensus 183 ~~~~--~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~Ls~N~i~~~~~~~ 259 (786)
.|. .|+.+++|++|+|++|++++..| .|..+++|++|+|++|+++ .+|..+..+++ |+.|+|++|.++ .+|..
T Consensus 320 -ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~ 395 (636)
T 4eco_A 320 -FPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNI 395 (636)
T ss_dssp -CCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSC
T ss_pred -cCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchh
Confidence 455 89999999999999999997777 8999999999999999999 67888999998 999999999998 67777
Q ss_pred ccccc--ccccccccccccCCCCccccc-------cCCcCceeccccccccccchhhhhcccCCcEEEecccccCCCcch
Q 047901 260 LGRLI--SLNKLILRGNQLSGHLPRALG-------LLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQEIPE 330 (786)
Q Consensus 260 ~~~l~--~L~~L~L~~N~l~~~~~~~~~-------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 330 (786)
+..+. +|+.|++++|++++..|..|. .+++|+.|+|++|+++.++...+..+++|++|+|++|+++.+.+.
T Consensus 396 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~ 475 (636)
T 4eco_A 396 FDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKN 475 (636)
T ss_dssp CCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSS
T ss_pred hhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHH
Confidence 77654 899999999999988888888 788999999999999988888888899999999999999855544
Q ss_pred HHhhhc-------CcCeeeccCCccCCCCCcccc--cccccceeccccccccccCCcccccCCCceEEec------cCCc
Q 047901 331 DLALLA-------HLSELDLSHNLFKGSIPSRIC--NLESLEKLNLSHNNISGQIPACFIGMSGLLSIDI------SYNE 395 (786)
Q Consensus 331 ~~~~l~-------~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l------~~N~ 395 (786)
.+.... +|+.|+|++|+++ .+|..+. .+++|+.|+|++|+|++ +|..+..+++|+.|++ ++|+
T Consensus 476 ~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~ 553 (636)
T 4eco_A 476 SLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNR 553 (636)
T ss_dssp SSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCB
T ss_pred HhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCc
Confidence 554433 8999999999998 6777776 89999999999999997 7888889999999999 5677
Q ss_pred ccccCCCC-CccccCCCccccCCCCC
Q 047901 396 LRGPIPNS-TVFRNAPRESFLGNNFS 420 (786)
Q Consensus 396 l~~~~p~~-~~~~~~~~~~~~~n~~~ 420 (786)
+.+.+|.. ..+.......+.+|...
T Consensus 554 l~~~~p~~l~~l~~L~~L~Ls~N~l~ 579 (636)
T 4eco_A 554 TLREWPEGITLCPSLTQLQIGSNDIR 579 (636)
T ss_dssp CCCCCCTTGGGCSSCCEEECCSSCCC
T ss_pred ccccChHHHhcCCCCCEEECCCCcCC
Confidence 77777743 23455566677777763
No 28
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=2.8e-46 Score=434.50 Aligned_cols=397 Identities=19% Similarity=0.129 Sum_probs=334.4
Q ss_pred CeEEEEcCCCCCcccCCcCccCCCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeC
Q 047901 2 RVNSINLTSTGLKGTLQEFSFSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDL 81 (786)
Q Consensus 2 ~~~~l~l~~~~l~~~l~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 81 (786)
+++.|+|++|.+. .++..+|.++++|++|+|++|.++++.|..|.++++|++|+|++|+++++.+..|+.+++|++|+|
T Consensus 57 ~L~~L~Ls~n~l~-~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 135 (606)
T 3vq2_A 57 ELQWLDLSRCEIE-TIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNV 135 (606)
T ss_dssp TCCEEECTTCCCC-EECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEEC
T ss_pred cCcEEeCCCCccc-ccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeC
Confidence 5789999999998 455558999999999999999999999999999999999999999999888889999999999999
Q ss_pred CCccCcc--cCCCCCCCCCCcEEEccCCcCcccCchhhcccCCcc----eeccccccccccCChhhhc------------
Q 047901 82 SLNQFSG--TFPPICNLSNLKYISLHNNKLSGSIPEEIGNLMKLS----YLMLDTNQFTGQLPRNICR------------ 143 (786)
Q Consensus 82 s~N~l~~--~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~----~L~L~~N~l~~~~~~~~~~------------ 143 (786)
++|++++ ++..+.++++|++|+|++|+++++.+..|+.+++|+ +|++++|++++..+..+..
T Consensus 136 ~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~ 215 (606)
T 3vq2_A 136 AHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNF 215 (606)
T ss_dssp CSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCC
T ss_pred CCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeeccCCc
Confidence 9999986 355699999999999999999999888888777665 6777777776544433322
Q ss_pred --------------------------------------------------------------------cCccceeecccc
Q 047901 144 --------------------------------------------------------------------SGLLEILTVNDN 155 (786)
Q Consensus 144 --------------------------------------------------------------------~~~L~~L~l~~N 155 (786)
+++|+.|++++|
T Consensus 216 ~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~ 295 (606)
T 3vq2_A 216 NSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGV 295 (606)
T ss_dssp SCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEESC
T ss_pred cchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEecCc
Confidence 222333333333
Q ss_pred cccCCCCCcCCCCCCcEEEccCccccccc-------------------CcccCCCCCCCEEeccCCcccccc--CcCccC
Q 047901 156 HFLGSIPNLRNCRSLVRAHLGRNNLTGNI-------------------SEDFGIYPNLKFLDLSHNNFYGEI--SSNWGK 214 (786)
Q Consensus 156 ~l~~~~~~l~~l~~L~~L~L~~N~l~~~~-------------------~~~f~~l~~L~~L~L~~N~i~~~~--~~~~~~ 214 (786)
.+...+ .+..+++|+.|++++|+++.++ +..+..+++|++|+|++|+++++. +..+..
T Consensus 296 ~~~~l~-~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~ 374 (606)
T 3vq2_A 296 SIKYLE-DVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLG 374 (606)
T ss_dssp CCCCCC-CCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEEEECCHHHHC
T ss_pred cchhhh-hccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchhhccCCCCCEEECcCCccCCCcchhhhhcc
Confidence 332222 4444445555555555443221 225667889999999999998774 788999
Q ss_pred CCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCC-CCcccccccccccccccccCCCCccccccCCcCcee
Q 047901 215 CHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIP-MELGRLISLNKLILRGNQLSGHLPRALGLLTELEYF 293 (786)
Q Consensus 215 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 293 (786)
+++|++|++++|.+++ .|..|..+++|+.|++++|++.+..+ ..|..+++|+.|++++|.+++..|..|..+++|+.|
T Consensus 375 ~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 453 (606)
T 3vq2_A 375 TNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTL 453 (606)
T ss_dssp CSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE
T ss_pred CCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEE
Confidence 9999999999999995 56899999999999999999998877 689999999999999999999999999999999999
Q ss_pred ccccccccc-cchhhhhcccCCcEEEecccccCCCcchHHhhhcCcCeeeccCCccCCCCCcccccccccceeccccccc
Q 047901 294 DLSSNRLNN-SILEALGFMFKLFYLNFSHNQFSQEIPEDLALLAHLSELDLSHNLFKGSIPSRICNLESLEKLNLSHNNI 372 (786)
Q Consensus 294 ~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 372 (786)
++++|++.+ +.+..|..+++|++|+|++|++++..|..|..+++|+.|+|++|++++..|..|.++++|+.|++++|+|
T Consensus 454 ~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l 533 (606)
T 3vq2_A 454 KMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRI 533 (606)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCC
T ss_pred ECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcC
Confidence 999999998 5788899999999999999999999999999999999999999999998899999999999999999999
Q ss_pred cccCCcccccCC-CceEEeccCCcccccCCC
Q 047901 373 SGQIPACFIGMS-GLLSIDISYNELRGPIPN 402 (786)
Q Consensus 373 ~~~~p~~~~~l~-~L~~L~l~~N~l~~~~p~ 402 (786)
+. +|..+..++ +|+.|++++|++.+..+.
T Consensus 534 ~~-~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 534 ET-SKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp CC-EESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred cc-cCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 95 555688887 599999999999876553
No 29
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=4.6e-46 Score=447.36 Aligned_cols=395 Identities=23% Similarity=0.230 Sum_probs=339.8
Q ss_pred CeEEEEcCCCCCcccCCcCccCCCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCcc--ccCCCCCCEE
Q 047901 2 RVNSINLTSTGLKGTLQEFSFSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPE--IGLLTHLFSL 79 (786)
Q Consensus 2 ~~~~l~l~~~~l~~~l~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~--~~~l~~L~~L 79 (786)
+++.|+|++|+..+.++..+|.++++|++|+|++|.+.++.|..|.++++|++|+|++|++++..|.. |..+++|++|
T Consensus 49 ~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L 128 (844)
T 3j0a_A 49 QLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRL 128 (844)
T ss_dssp SCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEE
T ss_pred cCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEE
Confidence 57899999998888998889999999999999999999999999999999999999999999765554 9999999999
Q ss_pred eCCCccCcccCC--CCCCCCCCcEEEccCCcCcccCchhhccc--CCcceeccccccccc--------------------
Q 047901 80 DLSLNQFSGTFP--PICNLSNLKYISLHNNKLSGSIPEEIGNL--MKLSYLMLDTNQFTG-------------------- 135 (786)
Q Consensus 80 ~Ls~N~l~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~~~~~l--~~L~~L~L~~N~l~~-------------------- 135 (786)
+|++|++++..+ .|.++++|++|+|++|+++++.+..|..+ ++|+.|+|++|.+++
T Consensus 129 ~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~ 208 (844)
T 3j0a_A 129 DLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEI 208 (844)
T ss_dssp EEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSE
T ss_pred ECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeE
Confidence 999999988754 48899999999999999998888877766 455555555544443
Q ss_pred ----------cCChhhhc--------------------------------------cCccceeecccccccCCCC-CcCC
Q 047901 136 ----------QLPRNICR--------------------------------------SGLLEILTVNDNHFLGSIP-NLRN 166 (786)
Q Consensus 136 ----------~~~~~~~~--------------------------------------~~~L~~L~l~~N~l~~~~~-~l~~ 166 (786)
..+..+.. .++|+.|++++|.+.+..+ .+.+
T Consensus 209 L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~ 288 (844)
T 3j0a_A 209 LDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFET 288 (844)
T ss_dssp EBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSS
T ss_pred EecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhc
Confidence 33333222 1467778888888776554 4788
Q ss_pred CCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEE
Q 047901 167 CRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLD 246 (786)
Q Consensus 167 l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 246 (786)
+++|+.|+|++|+|+++.+..|..+++|++|+|++|+++++.+..|..+++|+.|+|++|+++.+.+..|.++++|+.|+
T Consensus 289 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 368 (844)
T 3j0a_A 289 LKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLD 368 (844)
T ss_dssp CCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEE
T ss_pred CCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999988888999999999999
Q ss_pred eecccccccCC------------------C----------------------CcccccccccccccccccCCCCcc-ccc
Q 047901 247 LSSNHIAGEIP------------------M----------------------ELGRLISLNKLILRGNQLSGHLPR-ALG 285 (786)
Q Consensus 247 Ls~N~i~~~~~------------------~----------------------~~~~l~~L~~L~L~~N~l~~~~~~-~~~ 285 (786)
|++|.+++... . .+.++++|+.|+|++|++++..+. .+.
T Consensus 369 Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 448 (844)
T 3j0a_A 369 LRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPS 448 (844)
T ss_dssp EETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSC
T ss_pred CCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccc
Confidence 99999875321 0 123678999999999999876544 466
Q ss_pred cCCcCceeccccccccc-----cchhhhhcccCCcEEEecccccCCCcchHHhhhcCcCeeeccCCccCCCCCccccccc
Q 047901 286 LLTELEYFDLSSNRLNN-----SILEALGFMFKLFYLNFSHNQFSQEIPEDLALLAHLSELDLSHNLFKGSIPSRICNLE 360 (786)
Q Consensus 286 ~l~~L~~L~L~~N~l~~-----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 360 (786)
.+++|+.|+|++|.++. ..+..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..+. +
T Consensus 449 ~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~ 526 (844)
T 3j0a_A 449 ENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--A 526 (844)
T ss_dssp SCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--S
T ss_pred cCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--c
Confidence 78999999999999974 4456788999999999999999999999999999999999999999987777776 8
Q ss_pred ccceeccccccccccCCcccccCCCceEEeccCCcccccCC
Q 047901 361 SLEKLNLSHNNISGQIPACFIGMSGLLSIDISYNELRGPIP 401 (786)
Q Consensus 361 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 401 (786)
+|+.|+|++|+|++..|..|. +|+.|++++|++.+..+
T Consensus 527 ~L~~L~Ls~N~l~~~~~~~~~---~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 527 NLEILDISRNQLLAPNPDVFV---SLSVLDITHNKFICECE 564 (844)
T ss_dssp CCCEEEEEEECCCCCCSCCCS---SCCEEEEEEECCCCSSS
T ss_pred cccEEECCCCcCCCCChhHhC---CcCEEEecCCCcccccc
Confidence 999999999999999998764 78899999999987554
No 30
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-45 Score=425.36 Aligned_cols=395 Identities=21% Similarity=0.170 Sum_probs=334.5
Q ss_pred CeEEEEcCCCCCcccCCcCccCCCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeC
Q 047901 2 RVNSINLTSTGLKGTLQEFSFSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDL 81 (786)
Q Consensus 2 ~~~~l~l~~~~l~~~l~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 81 (786)
+++.|+|++|.+. .++...|.++++|++|+|++|+++++.+..|.++++|++|+|++|+++.+.+..|+.+++|++|+|
T Consensus 53 ~L~~L~Ls~n~i~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 131 (570)
T 2z63_A 53 ELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131 (570)
T ss_dssp SCCEEECTTCCCC-EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEEC
T ss_pred CceEEECCCCcCC-ccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEec
Confidence 5789999999988 566668999999999999999999999999999999999999999999877778999999999999
Q ss_pred CCccCccc--CCCCCCCCCCcEEEccCCcCcccCchhhcccCCc----ceeccccccccccCChhhhc------------
Q 047901 82 SLNQFSGT--FPPICNLSNLKYISLHNNKLSGSIPEEIGNLMKL----SYLMLDTNQFTGQLPRNICR------------ 143 (786)
Q Consensus 82 s~N~l~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L----~~L~L~~N~l~~~~~~~~~~------------ 143 (786)
++|++++. +..+.++++|++|++++|+++++.+..|+.+++| +.|++++|.+++..|..+..
T Consensus 132 ~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~ 211 (570)
T 2z63_A 132 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNF 211 (570)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCC
T ss_pred CCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceecCHHHhccCcceeEeccccc
Confidence 99999873 5568999999999999999999999999999998 88999999888666655443
Q ss_pred ---------------------------------------------------------------------cCccceeeccc
Q 047901 144 ---------------------------------------------------------------------SGLLEILTVND 154 (786)
Q Consensus 144 ---------------------------------------------------------------------~~~L~~L~l~~ 154 (786)
+++|+.|++++
T Consensus 212 ~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~ 291 (570)
T 2z63_A 212 DSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVS 291 (570)
T ss_dssp SCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEES
T ss_pred ccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecC
Confidence 34444444444
Q ss_pred ccccCCCCCcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCC--
Q 047901 155 NHFLGSIPNLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRI-- 232 (786)
Q Consensus 155 N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~-- 232 (786)
|.+..++..+..+ +|+.|++++|.++.++. ..+++|++|++++|.+....+. ..+++|++|++++|++++..
T Consensus 292 ~~l~~l~~~~~~~-~L~~L~l~~n~~~~l~~---~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~ 365 (570)
T 2z63_A 292 VTIERVKDFSYNF-GWQHLELVNCKFGQFPT---LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCC 365 (570)
T ss_dssp CEECSCCBCCSCC-CCSEEEEESCBCSSCCB---CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEE
T ss_pred ccchhhhhhhccC-CccEEeeccCcccccCc---ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccc
Confidence 4444443334444 55555555555553322 2455666666666666544443 67899999999999998654
Q ss_pred CccccCCccccEEEeecccccccCCCCcccccccccccccccccCCCCc-cccccCCcCceeccccccccccchhhhhcc
Q 047901 233 PPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLP-RALGLLTELEYFDLSSNRLNNSILEALGFM 311 (786)
Q Consensus 233 ~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 311 (786)
+..+.++++|+.|++++|.+.+..+. +..+++|+.|++++|.+.+..+ ..|..+++|+.|++++|.+....+..|..+
T Consensus 366 ~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 444 (570)
T 2z63_A 366 SQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGL 444 (570)
T ss_dssp EHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTC
T ss_pred cccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcC
Confidence 67888999999999999999976655 9999999999999999997766 578999999999999999999999999999
Q ss_pred cCCcEEEecccccC-CCcchHHhhhcCcCeeeccCCccCCCCCcccccccccceeccccccccccCCcccccCCCceEEe
Q 047901 312 FKLFYLNFSHNQFS-QEIPEDLALLAHLSELDLSHNLFKGSIPSRICNLESLEKLNLSHNNISGQIPACFIGMSGLLSID 390 (786)
Q Consensus 312 ~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 390 (786)
++|++|++++|.++ +..|..|..+++|+.|+|++|++++..|..|.++++|+.|++++|++++..|..|.++++|+.|+
T Consensus 445 ~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 524 (570)
T 2z63_A 445 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIW 524 (570)
T ss_dssp TTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred CcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEE
Confidence 99999999999997 56888999999999999999999988899999999999999999999999999999999999999
Q ss_pred ccCCcccccCCCCC
Q 047901 391 ISYNELRGPIPNST 404 (786)
Q Consensus 391 l~~N~l~~~~p~~~ 404 (786)
+++|++++..|...
T Consensus 525 l~~N~~~~~~~~~~ 538 (570)
T 2z63_A 525 LHTNPWDCSCPRID 538 (570)
T ss_dssp CCSSCBCCCTTTTH
T ss_pred ecCCcccCCCcchH
Confidence 99999999887654
No 31
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.5e-46 Score=401.53 Aligned_cols=260 Identities=22% Similarity=0.331 Sum_probs=199.8
Q ss_pred ccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEec------C
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSH------V 578 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~------~ 578 (786)
++|++.+.||+|+||+||+|+.+ +|+.||||++.... ......+.+.+|+++|+.++|||||++++++.. .
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~--~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 131 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAF--DVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEF 131 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTT--SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccc--cchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccC
Confidence 47999999999999999999864 78999999997532 233456788999999999999999999998753 3
Q ss_pred CeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEecccc
Q 047901 579 RHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGT 658 (786)
Q Consensus 579 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~ 658 (786)
+..|+|||||+ |+|.+++... +.+++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+
T Consensus 132 ~~~~ivmE~~~-g~L~~~i~~~---~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGl 204 (398)
T 4b99_A 132 KSVYVVLDLME-SDLHQIIHSS---QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGM 204 (398)
T ss_dssp CCEEEEEECCS-EEHHHHHTSS---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEEeCCC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecce
Confidence 67899999996 6899999754 6799999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCC----CCcceeeccCccccCCCCCCCCchHHHHhhhc-CcCcccchHHHHHHHHHHHhCCCCCCccccccCC--
Q 047901 659 AKLLKPN----SSNWTELVGTFGYVAPAHGNIGLHLAELAYTM-KITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSS-- 731 (786)
Q Consensus 659 a~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~-~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~-- 731 (786)
|+.+... .......+||+.|||| |++.+. .++.++||||+||++|||++|++||...+.....
T Consensus 205 a~~~~~~~~~~~~~~~~~~GT~~Y~AP----------Ev~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~ 274 (398)
T 4b99_A 205 ARGLCTSPAEHQYFMTEYVATRWYRAP----------ELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQL 274 (398)
T ss_dssp CBCC-------CCCCCSSCCCCTTCCH----------HHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHH
T ss_pred eeecccCccccccccccceeChHhcCH----------HHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence 9876432 1233457899999999 776654 5689999999999999999999999753321000
Q ss_pred -------------CcchhhhhhhhccCCCCCCChhHH----HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 732 -------------SSSINIEFNAMLDHRLPHPSLDVQ----EKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 732 -------------~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
........................ ..+..+.+|+.+||.+||++|||++|+++
T Consensus 275 I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 275 IMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp HHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 000000000000000000000011 12345789999999999999999999975
No 32
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.1e-44 Score=412.96 Aligned_cols=404 Identities=19% Similarity=0.187 Sum_probs=325.0
Q ss_pred EEEEcCCCCCcccCCcCccCCCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCC
Q 047901 4 NSINLTSTGLKGTLQEFSFSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSL 83 (786)
Q Consensus 4 ~~l~l~~~~l~~~l~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 83 (786)
+.||++++++. .+|...+ ++|++|||++|+++++.|..|.++++|++|+|++|+|+++.|.+|+.+++|++|+|++
T Consensus 3 ~~l~ls~n~l~-~ip~~~~---~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 78 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS---QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSH 78 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC---TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCS
T ss_pred ceEecCCCCcc-ccccccc---ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCC
Confidence 57999999998 6887433 8999999999999988889999999999999999999988899999999999999999
Q ss_pred ccCcccCCCCCCCCCCcEEEccCCcCccc-CchhhcccCCcceeccccccccccCChhhhccCcc--ceeecccccc--c
Q 047901 84 NQFSGTFPPICNLSNLKYISLHNNKLSGS-IPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLL--EILTVNDNHF--L 158 (786)
Q Consensus 84 N~l~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L--~~L~l~~N~l--~ 158 (786)
|+|++++.. .+++|++|+|++|+++++ .|..|+++++|++|++++|++++ ..+..+++| +.|++++|.+ .
T Consensus 79 N~l~~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 79 NKLVKISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp SCCCEEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred CceeecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 999987766 899999999999999974 67899999999999999999985 467777777 9999999988 3
Q ss_pred CCCC-CcC--------------------------CCCCCcEEEccCcc-------cccccCcccCC--------------
Q 047901 159 GSIP-NLR--------------------------NCRSLVRAHLGRNN-------LTGNISEDFGI-------------- 190 (786)
Q Consensus 159 ~~~~-~l~--------------------------~l~~L~~L~L~~N~-------l~~~~~~~f~~-------------- 190 (786)
+..+ .+. ++++|+.+++++|. +.+..+ .|..
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l 232 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIET 232 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEE
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcccccccc
Confidence 3222 222 24455555555553 222111 1222
Q ss_pred -------------CCCCCEEeccCCccccccCcCc-----cCCCCccEEEccCcccCCCCCccccCC---ccccEEEeec
Q 047901 191 -------------YPNLKFLDLSHNNFYGEISSNW-----GKCHRLGTLIVSGNNITGRIPPEIGNS---SQLHVLDLSS 249 (786)
Q Consensus 191 -------------l~~L~~L~L~~N~i~~~~~~~~-----~~l~~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~Ls~ 249 (786)
.++|++|++++|++++..|..+ ..+++|+.+++++|.+ .+.+..+..+ .+|+.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~-~~p~~~~~~~~~~~~L~~L~l~~ 311 (520)
T 2z7x_B 233 TWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF-GFPQSYIYEIFSNMNIKNFTVSG 311 (520)
T ss_dssp EHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC-CSCTHHHHHHHHTCCCSEEEEES
T ss_pred CHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce-ecchhhhhcccccCceeEEEcCC
Confidence 3478888889999987788877 8999999999999999 3333455544 6799999999
Q ss_pred ccccccCCCCcccccccccccccccccCCCCccccccCCcCceeccccccccccc--hhhhhcccCCcEEEecccccCCC
Q 047901 250 NHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSI--LEALGFMFKLFYLNFSHNQFSQE 327 (786)
Q Consensus 250 N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~ 327 (786)
|.+.... .+..+++|++|++++|++++..|..+..+++|+.|++++|+++++. +..+..+++|++|++++|.+++.
T Consensus 312 n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~ 389 (520)
T 2z7x_B 312 TRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYD 389 (520)
T ss_dssp SCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCC
T ss_pred Ccccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcc
Confidence 9886432 2367889999999999999888888999999999999999998754 36788999999999999999874
Q ss_pred cch-HHhhhcCcCeeeccCCccCCCCCcccccccccceeccccccccccCCcccccCCCceEEeccCCcccccCCC-CCc
Q 047901 328 IPE-DLALLAHLSELDLSHNLFKGSIPSRICNLESLEKLNLSHNNISGQIPACFIGMSGLLSIDISYNELRGPIPN-STV 405 (786)
Q Consensus 328 ~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~ 405 (786)
.|. .+..+++|++|+|++|++++..|..+. ++|+.|++++|+|+ .+|..+..+++|+.|++++|++++.++. ...
T Consensus 390 l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~ 466 (520)
T 2z7x_B 390 EKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDR 466 (520)
T ss_dssp GGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred cccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhcc
Confidence 554 588889999999999999877766654 68999999999998 5677667999999999999999865444 334
Q ss_pred cccCCCccccCCCCCCCC
Q 047901 406 FRNAPRESFLGNNFSTFY 423 (786)
Q Consensus 406 ~~~~~~~~~~~n~~~~~~ 423 (786)
+.......+.+|++.|.|
T Consensus 467 l~~L~~L~l~~N~~~c~c 484 (520)
T 2z7x_B 467 LTSLQKIWLHTNPWDCSC 484 (520)
T ss_dssp CTTCCEEECCSSCBCCCH
T ss_pred CCcccEEECcCCCCcccC
Confidence 556666788899985555
No 33
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.6e-45 Score=423.03 Aligned_cols=410 Identities=20% Similarity=0.176 Sum_probs=320.6
Q ss_pred CeEEEEcCCCCCcccCCcCccCCCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeC
Q 047901 2 RVNSINLTSTGLKGTLQEFSFSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDL 81 (786)
Q Consensus 2 ~~~~l~l~~~~l~~~l~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 81 (786)
+++.|+|++|++.+ ++...|.++++|++|+|++|+++++.|.+|.++++|++|+|++|+++++.|..|+.+++|++|+|
T Consensus 27 ~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 105 (549)
T 2z81_A 27 AMKSLDLSFNKITY-IGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNL 105 (549)
T ss_dssp TCCEEECCSSCCCE-ECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEEC
T ss_pred CccEEECcCCccCc-cChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEEC
Confidence 58899999999874 44457999999999999999999999999999999999999999999888888999999999999
Q ss_pred CCccCccc--CCCCCCCCCCcEEEccCCc-CcccCchhhcccCCcceeccccccccccCChhhhccCccceeeccccccc
Q 047901 82 SLNQFSGT--FPPICNLSNLKYISLHNNK-LSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFL 158 (786)
Q Consensus 82 s~N~l~~~--~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~ 158 (786)
++|++++. +..+..+++|++|+|++|+ +..+++..|.++++|++|++++|++++..|..+..+++|+.|+++.|.+.
T Consensus 106 s~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~ 185 (549)
T 2z81_A 106 MGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA 185 (549)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST
T ss_pred CCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCccc
Confidence 99999854 4568899999999999998 66666678999999999999999999888998888888888888877765
Q ss_pred CCCCC-cCCCCCCcEEEccCccccccc---CcccCCCCCCCEEeccCC----------------------------cccc
Q 047901 159 GSIPN-LRNCRSLVRAHLGRNNLTGNI---SEDFGIYPNLKFLDLSHN----------------------------NFYG 206 (786)
Q Consensus 159 ~~~~~-l~~l~~L~~L~L~~N~l~~~~---~~~f~~l~~L~~L~L~~N----------------------------~i~~ 206 (786)
..+.. +..+++|+.|++++|++++.. ......+++|++|++++| .+.+
T Consensus 186 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~ 265 (549)
T 2z81_A 186 FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNG 265 (549)
T ss_dssp THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEEC
T ss_pred ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccc
Confidence 44333 245677777777777777642 112223344444444443 3332
Q ss_pred ccC-----------------------------------cCccCCCCccEEEccCcccCCCCCccc-cCCccccEEEeecc
Q 047901 207 EIS-----------------------------------SNWGKCHRLGTLIVSGNNITGRIPPEI-GNSSQLHVLDLSSN 250 (786)
Q Consensus 207 ~~~-----------------------------------~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~Ls~N 250 (786)
+.. ..+...++|++|++++|++. .+|..+ ..+++|+.|+|++|
T Consensus 266 ~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N 344 (549)
T 2z81_A 266 LGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSEN 344 (549)
T ss_dssp CSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSS
T ss_pred cccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCC
Confidence 110 00122357899999999998 456555 57999999999999
Q ss_pred cccccCC---CCcccccccccccccccccCCCCc--cccccCCcCceeccccccccccchhhhhcccCCcEEEecccccC
Q 047901 251 HIAGEIP---MELGRLISLNKLILRGNQLSGHLP--RALGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFS 325 (786)
Q Consensus 251 ~i~~~~~---~~~~~l~~L~~L~L~~N~l~~~~~--~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 325 (786)
++++..| ..+..+++|+.|+|++|+++++.+ ..+..+++|+.|++++|+++.+ +..+..+++|++|++++|+++
T Consensus 345 ~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l-p~~~~~~~~L~~L~Ls~N~l~ 423 (549)
T 2z81_A 345 LMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHPM-PDSCQWPEKMRFLNLSSTGIR 423 (549)
T ss_dssp CCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCCCC-CSCCCCCTTCCEEECTTSCCS
T ss_pred ccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCccC-ChhhcccccccEEECCCCCcc
Confidence 9987653 457888999999999999987653 5688999999999999999865 456778899999999999997
Q ss_pred CCcchHHhhhcCcCeeeccCCccCCCCCcccccccccceeccccccccccCCcccccCCCceEEeccCCcccccCCC-CC
Q 047901 326 QEIPEDLALLAHLSELDLSHNLFKGSIPSRICNLESLEKLNLSHNNISGQIPACFIGMSGLLSIDISYNELRGPIPN-ST 404 (786)
Q Consensus 326 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~ 404 (786)
.. |..+ .++|+.|+|++|++++.+ ..+++|+.|+|++|+|+. +|. ...+++|+.|++++|++++.+|. ..
T Consensus 424 ~l-~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~~-ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~ 494 (549)
T 2z81_A 424 VV-KTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLKT-LPD-ASLFPVLLVMKISRNQLKSVPDGIFD 494 (549)
T ss_dssp CC-CTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCSS-CCC-GGGCTTCCEEECCSSCCCCCCTTGGG
T ss_pred cc-cchh--cCCceEEECCCCChhhhc----ccCChhcEEECCCCccCc-CCC-cccCccCCEEecCCCccCCcCHHHHh
Confidence 54 3332 268999999999998643 578899999999999984 454 45789999999999999987775 34
Q ss_pred ccccCCCccccCCCCCCCC
Q 047901 405 VFRNAPRESFLGNNFSTFY 423 (786)
Q Consensus 405 ~~~~~~~~~~~~n~~~~~~ 423 (786)
.+.......+.+|++.+.|
T Consensus 495 ~l~~L~~L~l~~N~~~~~~ 513 (549)
T 2z81_A 495 RLTSLQKIWLHTNPWDCSC 513 (549)
T ss_dssp GCTTCCEEECCSSCBCCCH
T ss_pred cCcccCEEEecCCCccCCC
Confidence 4566667788899985544
No 34
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.1e-44 Score=412.15 Aligned_cols=251 Identities=20% Similarity=0.296 Sum_probs=213.9
Q ss_pred ccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeEE
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVV 584 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 584 (786)
++|++.+.||+|+||+||+|+.+ +|+.||||++.. ......+.+.+|+++|+.++|||||++++++.+.+..|+|
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~----~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv 232 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMT----PHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMI 232 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC----CSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEec----cchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 57999999999999999999865 789999999875 2344567889999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCC--CcEEEeccccceec
Q 047901 585 YEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLE--YEARVSDFGTAKLL 662 (786)
Q Consensus 585 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~--~~~kl~Dfg~a~~~ 662 (786)
||||+||+|.+++... .+.+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.+
T Consensus 233 ~E~~~gg~L~~~i~~~--~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~ 307 (573)
T 3uto_A 233 YEFMSGGELFEKVADE--HNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL 307 (573)
T ss_dssp EECCCCCBHHHHHTCT--TSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEEC
T ss_pred EeecCCCcHHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEc
Confidence 9999999999999653 35689999999999999999999999 99999999999999854 89999999999988
Q ss_pred CCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhh
Q 047901 663 KPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAM 742 (786)
Q Consensus 663 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 742 (786)
... ......+||+.|||| |++.+..|+.++||||+||++|||++|+.||.... ..+.+..+
T Consensus 308 ~~~-~~~~~~~GT~~y~AP----------Ev~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~--------~~~~~~~i 368 (573)
T 3uto_A 308 DPK-QSVKVTTGTAEFAAP----------EVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN--------DDETLRNV 368 (573)
T ss_dssp CTT-SEEEEECSSGGGCCH----------HHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS--------HHHHHHHH
T ss_pred cCC-CceeeeEECccccCH----------HHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--------HHHHHHHH
Confidence 644 334567899999999 88888899999999999999999999999987432 22333444
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 743 LDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.......+.......+..+.+||.+||.+||++|||+.|+++
T Consensus 369 ~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 369 KSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp HTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 444444443333444556889999999999999999999986
No 35
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=5.9e-45 Score=390.50 Aligned_cols=200 Identities=25% Similarity=0.345 Sum_probs=170.2
Q ss_pred HHHHHhccCccceeeccccCceEEEEEcC----CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhc-CCCcccceeeE
Q 047901 500 EIIRRTKDFDAKYCIGKGEHRSVYRAKLP----SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGF 574 (786)
Q Consensus 500 ~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~ 574 (786)
.+....++|++.+.||+|+||+||+|+.+ .++.||||++... ....++.+|+++++.+ +|||||+++++
T Consensus 15 ~~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~------~~~~~~~~E~~~l~~~~~h~nIv~l~~~ 88 (361)
T 4f9c_A 15 AVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT------SHPIRIAAELQCLTVAGGQDNVMGVKYC 88 (361)
T ss_dssp HSGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT------SCHHHHHHHHHHHHHTCSBTTBCCCSEE
T ss_pred hcCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc------cCHHHHHHHHHHHHHhcCCCCCceEEEE
Confidence 33344678999999999999999999742 4678999998642 2345678999999998 69999999999
Q ss_pred EecCCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCC-CcEEE
Q 047901 575 CSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLE-YEARV 653 (786)
Q Consensus 575 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~-~~~kl 653 (786)
+.+.++.|+||||+++|+|.+++. .+++.++..++.|++.||+|||++ +|+||||||+|||++.+ +.+||
T Consensus 89 ~~~~~~~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl 159 (361)
T 4f9c_A 89 FRKNDHVVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYAL 159 (361)
T ss_dssp EEETTEEEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEE
T ss_pred EEECCEEEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEE
Confidence 999999999999999999999983 488999999999999999999999 99999999999999877 89999
Q ss_pred eccccceecCCCCC----------------------------cceeeccCccccCCCCCCCCchHHHHhhhc-CcCcccc
Q 047901 654 SDFGTAKLLKPNSS----------------------------NWTELVGTFGYVAPAHGNIGLHLAELAYTM-KITEKCD 704 (786)
Q Consensus 654 ~Dfg~a~~~~~~~~----------------------------~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~-~~~~~sD 704 (786)
+|||+|+...+... .....+||+.|||| |++.+. .|+.++|
T Consensus 160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP----------E~l~~~~~y~~~~D 229 (361)
T 4f9c_A 160 VDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAP----------EVLTKCPNQTTAID 229 (361)
T ss_dssp CCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCH----------HHHTTCSCCCTHHH
T ss_pred CcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCH----------HHHcCCCCCCCccc
Confidence 99999986643211 12335799999999 777654 5899999
Q ss_pred hHHHHHHHHHHHhCCCCCCc
Q 047901 705 VYSFGVLALEVIKGKHPGDF 724 (786)
Q Consensus 705 vwslGvil~elltg~~Pf~~ 724 (786)
|||+||++|||++|+.||..
T Consensus 230 iWSlG~il~ell~G~~Pf~~ 249 (361)
T 4f9c_A 230 MWSAGVIFLSLLSGRYPFYK 249 (361)
T ss_dssp HHHHHHHHHHHHHTCSSSSC
T ss_pred hhhhHHHHHHHHHCCCCCCC
Confidence 99999999999999999853
No 36
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.6e-44 Score=406.43 Aligned_cols=253 Identities=21% Similarity=0.198 Sum_probs=203.4
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCC--CCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCee
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFP--NDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHS 581 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~ 581 (786)
.++|++.+.||+|+||+||+|+.+ +|+.||||++..... ............++++++.++|||||++++++.+.+..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 357999999999999999999865 789999999864210 01111122233446677788999999999999999999
Q ss_pred eEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEecccccee
Q 047901 582 FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKL 661 (786)
Q Consensus 582 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~ 661 (786)
|+|||||+||+|.+++... +.+++..++.++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.
T Consensus 268 ylVmEy~~GGdL~~~l~~~---~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~ 341 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQH---GVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 341 (689)
T ss_dssp EEEECCCCSCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeee
Confidence 9999999999999999865 5699999999999999999999999 999999999999999999999999999998
Q ss_pred cCCCCCcceeeccCccccCCCCCCCCchHHHHhh-hcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhh
Q 047901 662 LKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAY-TMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFN 740 (786)
Q Consensus 662 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~-~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~ 740 (786)
..... ....+||+.|||| |++. +..|+.++||||+||++|||++|++||..... ........
T Consensus 342 ~~~~~--~~t~~GTp~YmAP----------Evl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~-----~~~~~i~~ 404 (689)
T 3v5w_A 342 FSKKK--PHASVGTHGYMAP----------EVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT-----KDKHEIDR 404 (689)
T ss_dssp CSSCC--CCSCCSCGGGCCH----------HHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGC-----CCHHHHHH
T ss_pred cCCCC--CCCccCCcCccCH----------HHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHH
Confidence 75432 3456999999999 7775 45799999999999999999999999974321 11122333
Q ss_pred hhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHH
Q 047901 741 AMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPT-----MQTVCQ 784 (786)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt-----~~ev~~ 784 (786)
.........|... +..+.++|..||.+||++|++ ++||++
T Consensus 405 ~i~~~~~~~p~~~----S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 405 MTLTMAVELPDSF----SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp HHHHCCCCCCTTS----CHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred hhcCCCCCCCccC----CHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 4444445444433 334889999999999999998 677754
No 37
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=4.1e-43 Score=410.33 Aligned_cols=419 Identities=22% Similarity=0.192 Sum_probs=329.9
Q ss_pred CeEEEEcCCCCCcccCCcCccCCCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeC
Q 047901 2 RVNSINLTSTGLKGTLQEFSFSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDL 81 (786)
Q Consensus 2 ~~~~l~l~~~~l~~~l~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 81 (786)
.++.|||++|.+. .++..+|.++++|++|||++|+|+++.+.+|.++++|++|+|++|+|+++.+.+|.++++|++|+|
T Consensus 53 ~~~~LdLs~N~i~-~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 53 STKNLDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred CCCEEEeeCCCCC-CCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 4789999999998 788889999999999999999999999999999999999999999999888889999999999999
Q ss_pred CCccCcccCCC-CCCCCCCcEEEccCCcCccc-CchhhcccCCcceeccccccccccCChhhhccCccc----eeecccc
Q 047901 82 SLNQFSGTFPP-ICNLSNLKYISLHNNKLSGS-IPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLE----ILTVNDN 155 (786)
Q Consensus 82 s~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~----~L~l~~N 155 (786)
++|+|+++++. |.++++|++|+|++|+++++ .|..+..+++|++|+|++|++++..+..+..+..++ .++++.|
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n 211 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 211 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccC
Confidence 99999988774 89999999999999999865 578889999999999999999988888877665443 4555666
Q ss_pred cccCCCCCcCCCC-------------------------------------------------------------------
Q 047901 156 HFLGSIPNLRNCR------------------------------------------------------------------- 168 (786)
Q Consensus 156 ~l~~~~~~l~~l~------------------------------------------------------------------- 168 (786)
.+..+.+......
T Consensus 212 ~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~ 291 (635)
T 4g8a_A 212 PMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYL 291 (635)
T ss_dssp CCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECC
T ss_pred cccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhh
Confidence 5544333222222
Q ss_pred ---------------CCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcC-------------------ccC
Q 047901 169 ---------------SLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSN-------------------WGK 214 (786)
Q Consensus 169 ---------------~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~-------------------~~~ 214 (786)
++..+.+.+|.+..+ ..+....+|+.|++++|.+..+.+.. +..
T Consensus 292 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~ 369 (635)
T 4g8a_A 292 DYYLDGIIDLFNCLTNVSSFSLVSVTIERV--KDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVD 369 (635)
T ss_dssp CSCEEECTTTTGGGTTCSEEEEESCEEEEC--GGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCB
T ss_pred cccccchhhhhhhhcccccccccccccccc--cccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCccccc
Confidence 222333333333222 12334456666666666655443322 223
Q ss_pred CCCccEEEccCcccCC--CCCccccCCccccEEEeecccccccCCCCcccccccccccccccccCCCC-ccccccCCcCc
Q 047901 215 CHRLGTLIVSGNNITG--RIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHL-PRALGLLTELE 291 (786)
Q Consensus 215 l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~ 291 (786)
+++|+.|++++|.+.. ..+..+..+.+|+.|+++.|.+. ..+..+..+++|+.+++++|...... ...|..+++++
T Consensus 370 l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~ 448 (635)
T 4g8a_A 370 LPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLI 448 (635)
T ss_dssp CTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEE-EECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCC
T ss_pred ccccccchhhccccccccccccchhhhhhhhhhhccccccc-cccccccccccccchhhhhccccccccccccccccccc
Confidence 5566666666666642 23444555666777777776665 34556788889999999888776543 45788999999
Q ss_pred eeccccccccccchhhhhcccCCcEEEeccccc-CCCcchHHhhhcCcCeeeccCCccCCCCCcccccccccceeccccc
Q 047901 292 YFDLSSNRLNNSILEALGFMFKLFYLNFSHNQF-SQEIPEDLALLAHLSELDLSHNLFKGSIPSRICNLESLEKLNLSHN 370 (786)
Q Consensus 292 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l-~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 370 (786)
.++++.|.+..+.+..+..++.|+.|+|++|.+ ....|..|..+++|+.|+|++|+|++..|..|.++++|++|+|++|
T Consensus 449 ~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N 528 (635)
T 4g8a_A 449 YLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHN 528 (635)
T ss_dssp EEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCC
Confidence 999999999999999999999999999999975 4457788999999999999999999988999999999999999999
Q ss_pred cccccCCcccccCCCceEEeccCCcccccCCCCCc-c-ccCCCccccCCCCCCCCC
Q 047901 371 NISGQIPACFIGMSGLLSIDISYNELRGPIPNSTV-F-RNAPRESFLGNNFSTFYG 424 (786)
Q Consensus 371 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-~-~~~~~~~~~~n~~~~~~~ 424 (786)
+|+++.|..|.++++|+.|||++|+|++.+|..-. + .......+.+|+|.|.|.
T Consensus 529 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 529 NFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp CCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred cCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 99999999999999999999999999998876421 2 345567889999977764
No 38
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1e-43 Score=398.10 Aligned_cols=381 Identities=21% Similarity=0.232 Sum_probs=285.0
Q ss_pred EEEcCCCCCcccCCcCccCCCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCccc-ccCCccccCCCCCCEEeCCC
Q 047901 5 SINLTSTGLKGTLQEFSFSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELS-GKIPPEIGLLTHLFSLDLSL 83 (786)
Q Consensus 5 ~l~l~~~~l~~~l~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~ 83 (786)
.++.+++++. .+|. + .++|++|||++|.++++.|..|.++++|++|+|++|++. .+.+..|..+++|++|+|++
T Consensus 14 ~~~c~~~~l~-~lp~--l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~ 88 (455)
T 3v47_A 14 NAICINRGLH-QVPE--L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDY 88 (455)
T ss_dssp EEECCSSCCS-SCCC--C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTT
T ss_pred ccCcCCCCcc-cCCC--C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCC
Confidence 4566777776 5665 2 267888888888888888888888888888888888886 35567788888888888888
Q ss_pred ccCcccCC-CCCCCCCCcEEEccCCcCcccCchh--hcccCCcceeccccccccccCChh-hhccCccceeecccccccC
Q 047901 84 NQFSGTFP-PICNLSNLKYISLHNNKLSGSIPEE--IGNLMKLSYLMLDTNQFTGQLPRN-ICRSGLLEILTVNDNHFLG 159 (786)
Q Consensus 84 N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~--~~~l~~L~~L~L~~N~l~~~~~~~-~~~~~~L~~L~l~~N~l~~ 159 (786)
|++++..+ .+..+++|++|+|++|++++..+.. |.++++|++|+|++|++++..|.. +..+++|+.|++++|.+.+
T Consensus 89 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~ 168 (455)
T 3v47_A 89 NQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKS 168 (455)
T ss_dssp CTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSC
T ss_pred CccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccc
Confidence 88887644 5788888888888888887644443 888888888888888888776665 6777788888888887776
Q ss_pred CCCC-cCCC--CCCcEEEccCcccccccCccc--------CCCCCCCEEeccCCccccccCcCccCC---CCccEEEccC
Q 047901 160 SIPN-LRNC--RSLVRAHLGRNNLTGNISEDF--------GIYPNLKFLDLSHNNFYGEISSNWGKC---HRLGTLIVSG 225 (786)
Q Consensus 160 ~~~~-l~~l--~~L~~L~L~~N~l~~~~~~~f--------~~l~~L~~L~L~~N~i~~~~~~~~~~l---~~L~~L~L~~ 225 (786)
..+. +.++ .+|+.|++++|.++.+.+..+ ..+++|++|+|++|++++..+..+... ++|+.|++++
T Consensus 169 ~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~ 248 (455)
T 3v47_A 169 ICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSN 248 (455)
T ss_dssp CCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTT
T ss_pred cChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeecc
Confidence 5543 4433 567777777777776554332 245667777777777666555554433 5666666666
Q ss_pred cccCCCCCccccCCccccEEEeecccccccCCCCcccc--cccccccccccccCCCCccccccCCcCceecccccccccc
Q 047901 226 NNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRL--ISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNS 303 (786)
Q Consensus 226 N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 303 (786)
|.+.+.. +..+.+....+..+..+ ++|+.|++++|.+++..|..|+.+++|+.|++++|++.++
T Consensus 249 ~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 314 (455)
T 3v47_A 249 SYNMGSS--------------FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKI 314 (455)
T ss_dssp CTTTSCC--------------TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEE
T ss_pred ccccccc--------------cchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCccccc
Confidence 6554321 11122222333334433 5788888888888888888888888888888888888888
Q ss_pred chhhhhcccCCcEEEecccccCCCcchHHhhhcCcCeeeccCCccCCCCCcccccccccceeccccccccccCCcccccC
Q 047901 304 ILEALGFMFKLFYLNFSHNQFSQEIPEDLALLAHLSELDLSHNLFKGSIPSRICNLESLEKLNLSHNNISGQIPACFIGM 383 (786)
Q Consensus 304 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 383 (786)
.+..|..+++|++|+|++|.+++..+..|..+++|+.|+|++|++++..|..|.++++|+.|++++|+|+++.+..|..+
T Consensus 315 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 394 (455)
T 3v47_A 315 DDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRL 394 (455)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTC
T ss_pred ChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccC
Confidence 88888888888888888888887778888888899999999999987778888889999999999999988877788888
Q ss_pred CCceEEeccCCcccccCCCCC
Q 047901 384 SGLLSIDISYNELRGPIPNST 404 (786)
Q Consensus 384 ~~L~~L~l~~N~l~~~~p~~~ 404 (786)
++|+.|++++|++++..|...
T Consensus 395 ~~L~~L~l~~N~l~~~~~~~~ 415 (455)
T 3v47_A 395 TSLQKIWLHTNPWDCSCPRID 415 (455)
T ss_dssp TTCCEEECCSSCBCCCTTTTH
T ss_pred CcccEEEccCCCcccCCCcch
Confidence 999999999999988777543
No 39
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=3.7e-44 Score=411.65 Aligned_cols=401 Identities=20% Similarity=0.199 Sum_probs=301.6
Q ss_pred EEcCCCCCcccCCcCccCCCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCcc
Q 047901 6 INLTSTGLKGTLQEFSFSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQ 85 (786)
Q Consensus 6 l~l~~~~l~~~l~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 85 (786)
.+.+++++. .+|...+ ++|++|||++|+++++.|..|.++++|++|+|++|+|+++.|.+|..+++|++|+|++|+
T Consensus 10 c~~~~~~l~-~ip~~~~---~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 85 (549)
T 2z81_A 10 CDGRSRSFT-SIPSGLT---AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNH 85 (549)
T ss_dssp EECTTSCCS-SCCSCCC---TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred EECCCCccc-cccccCC---CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCc
Confidence 678888887 7887433 789999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCC-CCCCCCCcEEEccCCcCccc-CchhhcccCCcceecccccc-ccccCChhhhccCccceeecccccccCCC-
Q 047901 86 FSGTFPP-ICNLSNLKYISLHNNKLSGS-IPEEIGNLMKLSYLMLDTNQ-FTGQLPRNICRSGLLEILTVNDNHFLGSI- 161 (786)
Q Consensus 86 l~~~~~~-~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~~~~L~~L~l~~N~l~~~~- 161 (786)
+++.++. +..+++|++|+|++|+++++ .+..|+++++|++|++++|+ ++...+..+..+++|+.|++++|.+++..
T Consensus 86 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 165 (549)
T 2z81_A 86 LSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQS 165 (549)
T ss_dssp CCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECT
T ss_pred cCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccCh
Confidence 9988876 89999999999999999974 46789999999999999998 55555578999999999999999999854
Q ss_pred CCcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCcccccc--C-cCccCCCCccEEEccCcccCCCCCc----
Q 047901 162 PNLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEI--S-SNWGKCHRLGTLIVSGNNITGRIPP---- 234 (786)
Q Consensus 162 ~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~--~-~~~~~l~~L~~L~L~~N~l~~~~~~---- 234 (786)
..+.++++|+.|+++.|.+..+....+..+++|++|++++|++++.. + .....+++|+.|++++|.+++..+.
T Consensus 166 ~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~ 245 (549)
T 2z81_A 166 QSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLK 245 (549)
T ss_dssp TTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHG
T ss_pred hhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHH
Confidence 46899999999999999998776666678999999999999998753 1 2223445555555555554321110
Q ss_pred c------------------------------cc-----------------------------CCccccEEEeeccccccc
Q 047901 235 E------------------------------IG-----------------------------NSSQLHVLDLSSNHIAGE 255 (786)
Q Consensus 235 ~------------------------------~~-----------------------------~l~~L~~L~Ls~N~i~~~ 255 (786)
. +. ...+|+.|++++|.+. .
T Consensus 246 ~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ 324 (549)
T 2z81_A 246 LLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-L 324 (549)
T ss_dssp GGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-C
T ss_pred HhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-c
Confidence 0 11 1234556666666665 3
Q ss_pred CCCCc-ccccccccccccccccCCCCc---cccccCCcCceeccccccccccch--hhhhcccCCcEEEecccccCCCcc
Q 047901 256 IPMEL-GRLISLNKLILRGNQLSGHLP---RALGLLTELEYFDLSSNRLNNSIL--EALGFMFKLFYLNFSHNQFSQEIP 329 (786)
Q Consensus 256 ~~~~~-~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~L~~N~l~~~~~--~~~~~l~~L~~L~L~~N~l~~~~~ 329 (786)
+|..+ ..+++|+.|+|++|++++..| ..++.+++|+.|++++|+++.++. ..+..+++|++|++++|+++ .+|
T Consensus 325 ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp 403 (549)
T 2z81_A 325 VPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMP 403 (549)
T ss_dssp CCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCC
T ss_pred CCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCC
Confidence 34333 456677777777777765442 235666777777777777766543 45666777777777777776 455
Q ss_pred hHHhhhcCcCeeeccCCccCCCCCcccccccccceeccccccccccCCcccccCCCceEEeccCCcccccCCCCCccccC
Q 047901 330 EDLALLAHLSELDLSHNLFKGSIPSRICNLESLEKLNLSHNNISGQIPACFIGMSGLLSIDISYNELRGPIPNSTVFRNA 409 (786)
Q Consensus 330 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~ 409 (786)
..+..+++|+.|+|++|++++ +|..+. ++|+.|++++|+|++.. ..+++|+.|++++|+++. +|....+...
T Consensus 404 ~~~~~~~~L~~L~Ls~N~l~~-l~~~~~--~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~~-ip~~~~l~~L 475 (549)
T 2z81_A 404 DSCQWPEKMRFLNLSSTGIRV-VKTCIP--QTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLKT-LPDASLFPVL 475 (549)
T ss_dssp SCCCCCTTCCEEECTTSCCSC-CCTTSC--TTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCSS-CCCGGGCTTC
T ss_pred hhhcccccccEEECCCCCccc-ccchhc--CCceEEECCCCChhhhc----ccCChhcEEECCCCccCc-CCCcccCccC
Confidence 566666777777777777763 333221 46777777777776542 478999999999999984 5655556666
Q ss_pred CCccccCCCCC
Q 047901 410 PRESFLGNNFS 420 (786)
Q Consensus 410 ~~~~~~~n~~~ 420 (786)
....+.+|...
T Consensus 476 ~~L~Ls~N~l~ 486 (549)
T 2z81_A 476 LVMKISRNQLK 486 (549)
T ss_dssp CEEECCSSCCC
T ss_pred CEEecCCCccC
Confidence 67777888764
No 40
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=2.6e-43 Score=405.09 Aligned_cols=404 Identities=19% Similarity=0.169 Sum_probs=291.3
Q ss_pred eEEEEcCCCCCcccCCcCccCCCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCC
Q 047901 3 VNSINLTSTGLKGTLQEFSFSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLS 82 (786)
Q Consensus 3 ~~~l~l~~~~l~~~l~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 82 (786)
.+.++++++++. .+|...+ ++|++|||++|+|+++.+..|.++++|++|+|++|+|+++.|++|..+++|++|+|+
T Consensus 33 ~~~l~ls~~~L~-~ip~~~~---~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 108 (562)
T 3a79_B 33 ESMVDYSNRNLT-HVPKDLP---PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVS 108 (562)
T ss_dssp CCEEECTTSCCC-SCCTTSC---TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECT
T ss_pred CcEEEcCCCCCc-cCCCCCC---CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECC
Confidence 367999999998 5887433 899999999999999999999999999999999999999999999999999999999
Q ss_pred CccCcccCCCCCCCCCCcEEEccCCcCcccC-chhhcccCCcceeccccccccccCChhhhccCcc--ceeecccccc--
Q 047901 83 LNQFSGTFPPICNLSNLKYISLHNNKLSGSI-PEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLL--EILTVNDNHF-- 157 (786)
Q Consensus 83 ~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L--~~L~l~~N~l-- 157 (786)
+|+|+.++.. .+++|++|+|++|+++++. |..|+++++|++|+|++|++++. .+..++.| +.|++++|.+
T Consensus 109 ~N~l~~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~ 183 (562)
T 3a79_B 109 HNRLQNISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHI 183 (562)
T ss_dssp TSCCCEECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCC
T ss_pred CCcCCccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccc
Confidence 9999987766 8999999999999999854 68999999999999999999853 45555666 9999999988
Q ss_pred cCCCCC-cC--------------------------CCCCCcEEEccCcc----------------------------cc-
Q 047901 158 LGSIPN-LR--------------------------NCRSLVRAHLGRNN----------------------------LT- 181 (786)
Q Consensus 158 ~~~~~~-l~--------------------------~l~~L~~L~L~~N~----------------------------l~- 181 (786)
++..+. +. ++++|+.+++++|+ ++
T Consensus 184 ~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~ 263 (562)
T 3a79_B 184 KGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTW 263 (562)
T ss_dssp CSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECH
T ss_pred cccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcH
Confidence 543332 32 34556666666653 11
Q ss_pred ----cccCcccCCCCCCCEEeccCCccccccCcCc-----cCCCCccEEEccCcccCCCCCccccCC---ccccEEEeec
Q 047901 182 ----GNISEDFGIYPNLKFLDLSHNNFYGEISSNW-----GKCHRLGTLIVSGNNITGRIPPEIGNS---SQLHVLDLSS 249 (786)
Q Consensus 182 ----~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~-----~~l~~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~Ls~ 249 (786)
++.+ ....++|++|++++|++++..|..+ ..++.|+.++++.|.+. +.+..+..+ .+|+.|++++
T Consensus 264 ~~~~~~~~--~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~-~p~~~~~~~~~~~~L~~L~l~~ 340 (562)
T 3a79_B 264 KCSVKLFQ--FFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFL-FSKEALYSVFAEMNIKMLSISD 340 (562)
T ss_dssp HHHHHHHH--HHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCS-SCHHHHHHHHHTCCCSEEEEES
T ss_pred HHHHHHHH--hhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceee-cChhhhhhhhccCcceEEEccC
Confidence 0000 1112488899999999987777766 66666666666666661 221222222 4577777777
Q ss_pred ccccccCCCCcccccccccccccccccCCCCccccccCCcCceeccccccccccc--hhhhhcccCCcEEEecccccCC-
Q 047901 250 NHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSI--LEALGFMFKLFYLNFSHNQFSQ- 326 (786)
Q Consensus 250 N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~- 326 (786)
|.+.... .+..+++|+.|++++|++++..|..|..+++|+.|++++|+++++. +..|..+++|++|++++|++++
T Consensus 341 n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~ 418 (562)
T 3a79_B 341 TPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSH 418 (562)
T ss_dssp SCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSC
T ss_pred CCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCc
Confidence 7765321 1256677777777777777767777777777777777777777654 3456777777777777777776
Q ss_pred CcchHHhhhcCcCeeeccCCccCCCCCcccccccccceeccccccccccCCcccccCCCceEEeccCCcccccCCC-CCc
Q 047901 327 EIPEDLALLAHLSELDLSHNLFKGSIPSRICNLESLEKLNLSHNNISGQIPACFIGMSGLLSIDISYNELRGPIPN-STV 405 (786)
Q Consensus 327 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~ 405 (786)
..+..+..+++|+.|+|++|++++..|..+. ++|+.|+|++|+|+. +|..+.++++|+.|++++|++++.++. ...
T Consensus 419 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~-ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~ 495 (562)
T 3a79_B 419 AYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMS-IPKDVTHLQALQELNVASNQLKSVPDGVFDR 495 (562)
T ss_dssp CSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCC-CCTTTTSSCCCSEEECCSSCCCCCCTTSTTT
T ss_pred cChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCcc-cChhhcCCCCCCEEECCCCCCCCCCHHHHhc
Confidence 3334566777777777777777655544433 577777777777774 444444777777777777777754443 333
Q ss_pred cccCCCccccCCCCCCCC
Q 047901 406 FRNAPRESFLGNNFSTFY 423 (786)
Q Consensus 406 ~~~~~~~~~~~n~~~~~~ 423 (786)
+.......+.+|++.|.|
T Consensus 496 l~~L~~L~l~~N~~~c~c 513 (562)
T 3a79_B 496 LTSLQYIWLHDNPWDCTC 513 (562)
T ss_dssp CTTCCCEECCSCCBCCCH
T ss_pred CCCCCEEEecCCCcCCCc
Confidence 445555667777775444
No 41
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=3.1e-43 Score=394.14 Aligned_cols=362 Identities=21% Similarity=0.194 Sum_probs=310.1
Q ss_pred CeEEEEcCCCCCcccCCcCccCCCCCCcEEECCCCCcc-ccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEe
Q 047901 2 RVNSINLTSTGLKGTLQEFSFSSFPHLAYLDLSINGFF-GTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLD 80 (786)
Q Consensus 2 ~~~~l~l~~~~l~~~l~~~~f~~l~~L~~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 80 (786)
+++.|+|++|.+.+ +....|.++++|++|+|++|.+. .+.+..|.++++|++|+|++|+++++.|..|+.+++|++|+
T Consensus 31 ~l~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 31 HVNYVDLSLNSIAE-LNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TCCEEECCSSCCCE-ECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred ccCEEEecCCccCc-CChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 58999999999985 54558999999999999999997 45678899999999999999999999999999999999999
Q ss_pred CCCccCccc-CCC--CCCCCCCcEEEccCCcCcccCchh-hcccCCcceeccccccccccCChhhhcc--Cccceeeccc
Q 047901 81 LSLNQFSGT-FPP--ICNLSNLKYISLHNNKLSGSIPEE-IGNLMKLSYLMLDTNQFTGQLPRNICRS--GLLEILTVND 154 (786)
Q Consensus 81 Ls~N~l~~~-~~~--~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~~--~~L~~L~l~~ 154 (786)
|++|++++. +.. +..+++|++|+|++|+++++.|.. |.++++|++|++++|++++..+..+..+ ..|+.|++++
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 999999863 223 889999999999999999987776 8999999999999999999999988887 7899999999
Q ss_pred ccccCCCCC---------cCCCCCCcEEEccCcccccccCcccCCC---CCCCEEeccCCccccccCcCccCCCCccEEE
Q 047901 155 NHFLGSIPN---------LRNCRSLVRAHLGRNNLTGNISEDFGIY---PNLKFLDLSHNNFYGEISSNWGKCHRLGTLI 222 (786)
Q Consensus 155 N~l~~~~~~---------l~~l~~L~~L~L~~N~l~~~~~~~f~~l---~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 222 (786)
|.+....+. +..+++|+.|++++|++++..+..|... ++|+.|++++|.+.+..
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~-------------- 255 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSS-------------- 255 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCC--------------
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccc--------------
Confidence 999876543 3467899999999999998877766544 89999999999876431
Q ss_pred ccCcccCCCCCccccCC--ccccEEEeecccccccCCCCcccccccccccccccccCCCCccccccCCcCceeccccccc
Q 047901 223 VSGNNITGRIPPEIGNS--SQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRL 300 (786)
Q Consensus 223 L~~N~l~~~~~~~~~~l--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 300 (786)
+..+.+.+..+..+.++ ++|+.|++++|.+.+..|..|..+++|+.|+|++|+++++.+..|.++++|+.|+|++|++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 335 (455)
T 3v47_A 256 FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFL 335 (455)
T ss_dssp TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred cchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCcc
Confidence 22333443444444443 6888888888888888888888888888888888888888888888889999999999999
Q ss_pred cccchhhhhcccCCcEEEecccccCCCcchHHhhhcCcCeeeccCCccCCCCCcccccccccceeccccccccccCCc
Q 047901 301 NNSILEALGFMFKLFYLNFSHNQFSQEIPEDLALLAHLSELDLSHNLFKGSIPSRICNLESLEKLNLSHNNISGQIPA 378 (786)
Q Consensus 301 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 378 (786)
..+.+..|..+++|++|+|++|++++..|..|..+++|++|+|++|+|++..+..|..+++|+.|++++|++++..|.
T Consensus 336 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 336 GSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp CEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCc
Confidence 888888888899999999999999888888899999999999999999977777888999999999999999887763
No 42
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.5e-43 Score=418.13 Aligned_cols=391 Identities=19% Similarity=0.203 Sum_probs=325.4
Q ss_pred CCcEEECCC--CCccccCchhccCCCCCCEEeCcCCcccc-----------------cCCcccc--CCCCCCEEeCCCcc
Q 047901 27 HLAYLDLSI--NGFFGTLPPQVRNLSKLKYLDLSENELSG-----------------KIPPEIG--LLTHLFSLDLSLNQ 85 (786)
Q Consensus 27 ~L~~L~L~~--n~i~~~~~~~~~~l~~L~~L~L~~N~l~~-----------------~~~~~~~--~l~~L~~L~Ls~N~ 85 (786)
.++.+.+.. |++++ +|..|.++++|++|+|++|+|++ .+|..++ .+++|++|+|++|+
T Consensus 424 ~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~ 502 (876)
T 4ecn_A 424 SLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCP 502 (876)
T ss_dssp CCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCT
T ss_pred chhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCC
Confidence 344445544 88887 78899999999999999999997 2788877 99999999999999
Q ss_pred CcccCC-CCCCCCCCcEEEccCCc-Ccc-cCchhhcccC-------CcceeccccccccccCCh--hhhccCccceeecc
Q 047901 86 FSGTFP-PICNLSNLKYISLHNNK-LSG-SIPEEIGNLM-------KLSYLMLDTNQFTGQLPR--NICRSGLLEILTVN 153 (786)
Q Consensus 86 l~~~~~-~~~~l~~L~~L~L~~N~-l~~-~~~~~~~~l~-------~L~~L~L~~N~l~~~~~~--~~~~~~~L~~L~l~ 153 (786)
+.+..+ .+.++++|++|+|++|+ +++ ..|..|..++ +|++|+|++|+++ .+|. .+..+++|+.|+|+
T Consensus 503 l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls 581 (876)
T 4ecn_A 503 NMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCV 581 (876)
T ss_dssp TCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECT
T ss_pred CCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECC
Confidence 877655 58999999999999998 887 6787777766 9999999999999 7888 99999999999999
Q ss_pred cccccCCCCCcCCCCCCcEEEccCcccccccCcccCCCCC-CCEEeccCCccccccCcCccCCCC--ccEEEccCcccCC
Q 047901 154 DNHFLGSIPNLRNCRSLVRAHLGRNNLTGNISEDFGIYPN-LKFLDLSHNNFYGEISSNWGKCHR--LGTLIVSGNNITG 230 (786)
Q Consensus 154 ~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~-L~~L~L~~N~i~~~~~~~~~~l~~--L~~L~L~~N~l~~ 230 (786)
+|.++.++ .+.++++|+.|+|++|+|+ ..|..|..+++ |++|+|++|+|+ ..|..+..++. |+.|+|++|++.+
T Consensus 582 ~N~l~~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g 658 (876)
T 4ecn_A 582 HNKVRHLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGS 658 (876)
T ss_dssp TSCCCBCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTT
T ss_pred CCCcccch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCC
Confidence 99999554 8999999999999999999 55667899999 999999999999 55777777654 9999999999987
Q ss_pred CCCccc---c--CCccccEEEeecccccccCCCCcccccccccccccccccCCCCccccccC-------CcCceeccccc
Q 047901 231 RIPPEI---G--NSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLL-------TELEYFDLSSN 298 (786)
Q Consensus 231 ~~~~~~---~--~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-------~~L~~L~L~~N 298 (786)
.+|... . .+++|+.|+|++|+++.+.+..+..+++|+.|+|++|+|+.+++..+... ++|+.|+|++|
T Consensus 659 ~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N 738 (876)
T 4ecn_A 659 EGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFN 738 (876)
T ss_dssp TSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSS
T ss_pred ccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCCccEEECCCC
Confidence 665332 2 34589999999999995444455689999999999999996666666543 39999999999
Q ss_pred cccccchhhh-hcccCCcEEEecccccCCCcchHHhhhcCcCeeeccC------CccCCCCCcccccccccceecccccc
Q 047901 299 RLNNSILEAL-GFMFKLFYLNFSHNQFSQEIPEDLALLAHLSELDLSH------NLFKGSIPSRICNLESLEKLNLSHNN 371 (786)
Q Consensus 299 ~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~------N~l~~~~~~~~~~l~~L~~L~L~~N~ 371 (786)
+++.++...+ ..+++|+.|+|++|++++ +|..+..+++|+.|+|++ |++.+.+|..|.++++|+.|+|++|+
T Consensus 739 ~L~~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~ 817 (876)
T 4ecn_A 739 KLTSLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSND 817 (876)
T ss_dssp CCCCCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSC
T ss_pred CCccchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCC
Confidence 9997654443 489999999999999997 688899999999999976 88888999999999999999999999
Q ss_pred ccccCCcccccCCCceEEeccCCcccccCCCCCc-cccCCCccccCCCCCCCCCCC
Q 047901 372 ISGQIPACFIGMSGLLSIDISYNELRGPIPNSTV-FRNAPRESFLGNNFSTFYGTS 426 (786)
Q Consensus 372 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-~~~~~~~~~~~n~~~~~~~~~ 426 (786)
| +.+|..+. ++|+.|||++|++....+..-. ........+..|+....++|+
T Consensus 818 L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~~I~gC~ 870 (876)
T 4ecn_A 818 I-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQDIRGCD 870 (876)
T ss_dssp C-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTSEEESCG
T ss_pred C-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchheeecCCCccccCCCC
Confidence 9 57777765 6999999999999865543211 122334556677776666663
No 43
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=2.7e-42 Score=362.93 Aligned_cols=250 Identities=26% Similarity=0.404 Sum_probs=208.1
Q ss_pred hccCccceeeccccCceEEEEEc-CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|+..+.||+|+||+||+|+. .+++.||||++... .....+.+.+|+.+++.++||||+++++++...+..++
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 94 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ----QQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV 94 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGG----GCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecc----cccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEE
Confidence 45799999999999999999985 47899999998652 22345678899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecC
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK 663 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 663 (786)
||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 95 v~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (297)
T 3fxz_A 95 VMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167 (297)
T ss_dssp EEECCTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEECCCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecC
Confidence 99999999999999753 588999999999999999999999 99999999999999999999999999998877
Q ss_pred CCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhhc
Q 047901 664 PNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAML 743 (786)
Q Consensus 664 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 743 (786)
..........||+.|+|| |...+..+++++||||+||++|||++|+.||...... ..........
T Consensus 168 ~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----~~~~~~~~~~ 232 (297)
T 3fxz_A 168 PEQSKRSTMVGTPYWMAP----------EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL-----RALYLIATNG 232 (297)
T ss_dssp STTCCBCCCCSCGGGCCH----------HHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHHHHHHC
T ss_pred CcccccCCccCCcCccCh----------hhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHhCC
Confidence 655555667899999999 8888889999999999999999999999998643211 0000111111
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 744 DHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 744 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
......+. ..+..+.+++.+||+.||++|||++|+++
T Consensus 233 ~~~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 233 TPELQNPE----KLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp SCCCSCGG----GSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCCCCCcc----ccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 11222222 23345889999999999999999999976
No 44
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.1e-42 Score=371.54 Aligned_cols=278 Identities=33% Similarity=0.598 Sum_probs=224.0
Q ss_pred ccccHHHHHHHhccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceee
Q 047901 494 GKIMYEEIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYG 573 (786)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~ 573 (786)
..++..++....++|+..+.||+|+||+||+|+..+++.||||++...... .....+.+|+++++.++||||+++++
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~ 94 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQ---GGELQFQTEVEMISMAVHRNLLRLRG 94 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC--------CCCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCc---hHHHHHHHHHHHHHhccCCCccceEE
Confidence 456778898999999999999999999999999888999999999763221 12236889999999999999999999
Q ss_pred EEecCCeeeEEEeccCCCCHHHHhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEE
Q 047901 574 FCSHVRHSFVVYEYINRGSLATVLSNNF-ASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEAR 652 (786)
Q Consensus 574 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~k 652 (786)
++...+..++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+.+.++|+||||||+||+++.++.+|
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~k 174 (326)
T 3uim_A 95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 174 (326)
T ss_dssp EECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEE
T ss_pred EEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEE
Confidence 9999999999999999999999998653 234589999999999999999999998777999999999999999999999
Q ss_pred EeccccceecCCCCCc-ceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCC
Q 047901 653 VSDFGTAKLLKPNSSN-WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSS 731 (786)
Q Consensus 653 l~Dfg~a~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~ 731 (786)
|+|||+++........ .....||+.|+|| |...+..++.++|||||||++|||++|+.||+........
T Consensus 175 l~Dfg~~~~~~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~ 244 (326)
T 3uim_A 175 VGDFGLAKLMDYKDTHVTTAVRGTIGHIAP----------EYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDD 244 (326)
T ss_dssp ECCCSSCEECCSSSSCEECCCCSCGGGCCH----------HHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTS
T ss_pred eccCccccccCcccccccccccCCcCccCH----------HHhccCCCCccccchhHHHHHHHHHhCCCccccccccccc
Confidence 9999999887544332 3345699999999 7888888999999999999999999999998632211111
Q ss_pred Ccchhhh---------hhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 732 SSSINIE---------FNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 732 ~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
....... ...+.+.... .....+....+.+++..||+.||++|||+.||++.|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L 306 (326)
T 3uim_A 245 DVMLLDWVKGLLKEKKLEALVDVDLQ--GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306 (326)
T ss_dssp CSBHHHHHTTTTSSCCSTTSSCTTCT--TSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHH
T ss_pred chhHHHHHHHHhhchhhhhhcChhhc--cccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHh
Confidence 1111111 1111122211 223455667899999999999999999999999864
No 45
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.2e-42 Score=394.05 Aligned_cols=379 Identities=19% Similarity=0.220 Sum_probs=315.0
Q ss_pred cEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCC-CCCCCCCCcEEEccCC
Q 047901 29 AYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFP-PICNLSNLKYISLHNN 107 (786)
Q Consensus 29 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N 107 (786)
++||+++|+++. +|..+. ++|++|+|++|+|+++.|.+|..+++|++|+|++|+|++..+ .|..+++|++|+|++|
T Consensus 3 ~~l~ls~n~l~~-ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLIH-VPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCSS-CCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCccc-cccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 589999999985 455454 899999999999998888999999999999999999998855 6999999999999999
Q ss_pred cCcccCchhhcccCCcceeccccccccc-cCChhhhccCccceeecccccccCCCCCcCCCCCC--cEEEccCccc--cc
Q 047901 108 KLSGSIPEEIGNLMKLSYLMLDTNQFTG-QLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSL--VRAHLGRNNL--TG 182 (786)
Q Consensus 108 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L--~~L~L~~N~l--~~ 182 (786)
+|+.+++. .+++|++|+|++|++++ ..|..|..+++|+.|++++|.+.+ ..+..+++| +.|++++|.+ ++
T Consensus 80 ~l~~lp~~---~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~--~~~~~l~~L~L~~L~l~~n~l~~~~ 154 (520)
T 2z7x_B 80 KLVKISCH---PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK--SSVLPIAHLNISKVLLVLGETYGEK 154 (520)
T ss_dssp CCCEEECC---CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG--GGGGGGTTSCEEEEEEEECTTTTSS
T ss_pred ceeecCcc---ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch--hhccccccceeeEEEeecccccccc
Confidence 99965544 89999999999999997 468999999999999999999986 356777888 9999999999 55
Q ss_pred ccCcccCC--------------------------CCCCCEEeccCCc-------cccccCcCccC---------------
Q 047901 183 NISEDFGI--------------------------YPNLKFLDLSHNN-------FYGEISSNWGK--------------- 214 (786)
Q Consensus 183 ~~~~~f~~--------------------------l~~L~~L~L~~N~-------i~~~~~~~~~~--------------- 214 (786)
..+..|.. +++|+.|++++|. +.+..+ .+..
T Consensus 155 ~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~ 233 (520)
T 2z7x_B 155 EDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETT 233 (520)
T ss_dssp CCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEE
T ss_pred cccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccccC
Confidence 55555544 6677777777775 322222 2222
Q ss_pred ------------CCCccEEEccCcccCCCCCccc-----cCCccccEEEeecccccccCCCCcccc---ccccccccccc
Q 047901 215 ------------CHRLGTLIVSGNNITGRIPPEI-----GNSSQLHVLDLSSNHIAGEIPMELGRL---ISLNKLILRGN 274 (786)
Q Consensus 215 ------------l~~L~~L~L~~N~l~~~~~~~~-----~~l~~L~~L~Ls~N~i~~~~~~~~~~l---~~L~~L~L~~N 274 (786)
.++|++|++++|++++.+|..+ ..+++|+.+++++|.+ ......+..+ .+|+.|++++|
T Consensus 234 ~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~-~~p~~~~~~~~~~~~L~~L~l~~n 312 (520)
T 2z7x_B 234 WNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF-GFPQSYIYEIFSNMNIKNFTVSGT 312 (520)
T ss_dssp HHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC-CSCTHHHHHHHHTCCCSEEEEESS
T ss_pred HHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce-ecchhhhhcccccCceeEEEcCCC
Confidence 2378888889999988888888 8999999999999999 2332455555 67999999999
Q ss_pred ccCCCCccccccCCcCceeccccccccccchhhhhcccCCcEEEecccccCC--CcchHHhhhcCcCeeeccCCccCCCC
Q 047901 275 QLSGHLPRALGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQ--EIPEDLALLAHLSELDLSHNLFKGSI 352 (786)
Q Consensus 275 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~ 352 (786)
.+.... .+..+++|+.|++++|++++..+..+..+++|++|+|++|++++ ..|..+..+++|+.|+|++|++++.+
T Consensus 313 ~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l 390 (520)
T 2z7x_B 313 RMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDE 390 (520)
T ss_dssp CCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCG
T ss_pred cccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCccc
Confidence 987543 23789999999999999999888999999999999999999987 45578999999999999999999745
Q ss_pred Cc-ccccccccceeccccccccccCCcccccCCCceEEeccCCcccccCCCCCccccCCCccccCCCCCC
Q 047901 353 PS-RICNLESLEKLNLSHNNISGQIPACFIGMSGLLSIDISYNELRGPIPNSTVFRNAPRESFLGNNFST 421 (786)
Q Consensus 353 ~~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~~ 421 (786)
|. .+..+++|+.|++++|++++..|..+. ++|+.|++++|+++..++....+.......+.+|....
T Consensus 391 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~L~~N~l~~ 458 (520)
T 2z7x_B 391 KKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIKSIPKQVVKLEALQELNVASNQLKS 458 (520)
T ss_dssp GGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCC
T ss_pred ccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCcccccchhhhcCCCCCEEECCCCcCCc
Confidence 54 588999999999999999988877664 79999999999999544444455666667788887753
No 46
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=2.3e-42 Score=365.37 Aligned_cols=255 Identities=32% Similarity=0.454 Sum_probs=200.9
Q ss_pred HhccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 504 RTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 504 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
...+|++.+.||+|+||+||+|+. +++.||||++.... ......+.+.+|++++++++||||+++++++...+..++
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQD--FHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSI 111 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCC--CSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEE
T ss_pred ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCC--CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEE
Confidence 356899999999999999999987 57899999987532 233456789999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEEcCCCCCceeeCCCCcEEEecccccee
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPP--IVHRDISSNNVLLDLEYEARVSDFGTAKL 661 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~--ivHrdlk~~Nill~~~~~~kl~Dfg~a~~ 661 (786)
||||+++|+|.+++........+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+|||+++.
T Consensus 112 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 188 (309)
T 3p86_A 112 VTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL 188 (309)
T ss_dssp EEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC----
T ss_pred EEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCcc
Confidence 999999999999998653334589999999999999999999998 8 99999999999999999999999999986
Q ss_pred cCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhh
Q 047901 662 LKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNA 741 (786)
Q Consensus 662 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 741 (786)
............||+.|+|| |...+..++.++|||||||++|||++|+.||..... ......
T Consensus 189 ~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~--------~~~~~~ 250 (309)
T 3p86_A 189 KASTFLSSKSAAGTPEWMAP----------EVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNP--------AQVVAA 250 (309)
T ss_dssp -------------CCTTSCH----------HHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCH--------HHHHHH
T ss_pred ccccccccccCCCCccccCh----------hhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHH
Confidence 65443334556899999999 788888899999999999999999999999874321 111111
Q ss_pred h--ccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 742 M--LDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 742 ~--~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
+ ...+...+... +..+.+++..||+.||++|||++++++.|
T Consensus 251 ~~~~~~~~~~~~~~----~~~l~~li~~~l~~dP~~Rps~~~ll~~L 293 (309)
T 3p86_A 251 VGFKCKRLEIPRNL----NPQVAAIIEGCWTNEPWKRPSFATIMDLL 293 (309)
T ss_dssp HHHSCCCCCCCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHhcCCCCCCCccC----CHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 1 22223333322 23588999999999999999999999864
No 47
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=4.1e-42 Score=366.04 Aligned_cols=249 Identities=22% Similarity=0.359 Sum_probs=210.2
Q ss_pred hccCccceeeccccCceEEEEEc-CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|++.+.||+|+||.||+|+. .+++.||||++.... ......+.+.+|+++++.++||||+++++++...+..|+
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 91 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQ--LNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYL 91 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGG--SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhc--CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEE
Confidence 45799999999999999999986 578999999986532 123456678899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecC
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK 663 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 663 (786)
||||+++|+|.+++... +.+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 92 v~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 165 (328)
T 3fe3_A 92 IMEYASGGEVFDYLVAH---GRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFT 165 (328)
T ss_dssp EECCCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred EEECCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence 99999999999999764 5689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcC-cccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhh
Q 047901 664 PNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKIT-EKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAM 742 (786)
Q Consensus 664 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~-~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 742 (786)
.. ......+||+.|+|| |.+.+..++ +++||||+||++|||++|+.||+... .......+
T Consensus 166 ~~-~~~~~~~gt~~y~aP----------E~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--------~~~~~~~i 226 (328)
T 3fe3_A 166 VG-GKLDAFCGAPPYAAP----------ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN--------LKELRERV 226 (328)
T ss_dssp SS-CGGGTTSSSGGGCCH----------HHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHH
T ss_pred CC-CccccccCCcceeCc----------ccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC--------HHHHHHHH
Confidence 43 234456899999999 777777765 79999999999999999999987532 22333444
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 743 LDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.......|.... ..+.+++.+||..||.+|||++|+++
T Consensus 227 ~~~~~~~p~~~s----~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 227 LRGKYRIPFYMS----TDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp HHCCCCCCTTSC----HHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred HhCCCCCCCCCC----HHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 444444444333 34789999999999999999999975
No 48
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.5e-42 Score=368.56 Aligned_cols=249 Identities=24% Similarity=0.351 Sum_probs=200.5
Q ss_pred hccCccceeeccccCceEEEEEc-CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|++.+.||+|+||+||+|+. .+++.||||++...... ...+.+.+|+++++.++||||+++++++...+..++
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~---~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l 85 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG---SDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFM 85 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC------CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc---hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEE
Confidence 46799999999999999999985 47899999998763322 233568899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecC
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK 663 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 663 (786)
||||+++|+|.+++... +.+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|....
T Consensus 86 v~E~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 159 (347)
T 3zgw_A 86 VLEYCPGGELFDYIISQ---DRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPK 159 (347)
T ss_dssp EEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC--
T ss_pred EEeCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCccccc
Confidence 99999999999999754 5689999999999999999999999 99999999999999999999999999998665
Q ss_pred CCC-CcceeeccCccccCCCCCCCCchHHHHhhhcCc-CcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhh
Q 047901 664 PNS-SNWTELVGTFGYVAPAHGNIGLHLAELAYTMKI-TEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNA 741 (786)
Q Consensus 664 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~-~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 741 (786)
... ......+||+.|+|| |...+..+ +.++||||+||++|||++|..||.... .......
T Consensus 160 ~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~--------~~~~~~~ 221 (347)
T 3zgw_A 160 GNKDYHLQTCCGSLAYAAP----------ELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN--------VMALYKK 221 (347)
T ss_dssp ------------CGGGCCH----------HHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHH
T ss_pred CCCCccccccCCccCccCH----------HHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC--------HHHHHHH
Confidence 432 233456899999999 77776665 889999999999999999999987432 2233344
Q ss_pred hccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 742 MLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
+.......|.... ..+.+++.+||..||++|||++|+++
T Consensus 222 i~~~~~~~p~~~s----~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 222 IMRGKYDVPKWLS----PSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp HHHTCCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHcCCCCCCCCCC----HHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 4444554444332 34789999999999999999999985
No 49
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.8e-41 Score=359.36 Aligned_cols=254 Identities=25% Similarity=0.420 Sum_probs=206.3
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|...+.||+|+||+||+|+.. +++.||+|++.. ......+.|.+|+++++.++||||+++++++.+++..++
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~----~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 84 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR----FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNF 84 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESC----CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEecc----CCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEE
Confidence 457999999999999999999865 688999999854 344567789999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecC
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK 663 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 663 (786)
||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 85 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 159 (310)
T 3s95_A 85 ITEYIKGGTLRGIIKSM--DSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMV 159 (310)
T ss_dssp EEECCTTCBHHHHHHHC--CTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC
T ss_pred EEEecCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecc
Confidence 99999999999999864 35689999999999999999999999 99999999999999999999999999998775
Q ss_pred CCCCcc--------------eeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCcccccc
Q 047901 664 PNSSNW--------------TELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFS 729 (786)
Q Consensus 664 ~~~~~~--------------~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~ 729 (786)
...... ....||+.|+|| |.+.+..++.++||||||+++|||++|..||.......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~ 229 (310)
T 3s95_A 160 DEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP----------EMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRT 229 (310)
T ss_dssp --------------------CCCCSCGGGCCH----------HHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBC
T ss_pred cccccccccccccccccccccccCCCcceeCH----------HHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhH
Confidence 432211 145799999999 78888889999999999999999999999976432211
Q ss_pred CCCcchhhhhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 730 SSSSSINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
..... ......+...+ .. .+..+.+++.+||+.||++|||+.|+++.|
T Consensus 230 ~~~~~---~~~~~~~~~~~--~~----~~~~l~~li~~~l~~dP~~Rps~~~l~~~L 277 (310)
T 3s95_A 230 MDFGL---NVRGFLDRYCP--PN----CPPSFFPITVRCCDLDPEKRPSFVKLEHWL 277 (310)
T ss_dssp TTSSB---CHHHHHHHTCC--TT----CCTTHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHhh---hhhccccccCC--CC----CCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 11111 11111111111 11 112488999999999999999999998764
No 50
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.1e-41 Score=367.02 Aligned_cols=255 Identities=18% Similarity=0.253 Sum_probs=212.9
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCc--hhhHHHHHHHHHHHhhcCCCcccceeeEEecCCee
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQ--MSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHS 581 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~ 581 (786)
.+.|++.+.||+|+||+||+|+.. +++.||||++........ ....+.+.+|+.+++.++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 357999999999999999999865 689999999976432211 12356889999999999999999999999999999
Q ss_pred eEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCC----cEEEeccc
Q 047901 582 FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEY----EARVSDFG 657 (786)
Q Consensus 582 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~----~~kl~Dfg 657 (786)
++||||+++|+|.+++... +.+++..+..++.|++.||.|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 91 ~lv~e~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG 164 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (361)
T ss_dssp EEEEECCCSCBHHHHHTTC---SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCS
T ss_pred EEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecC
Confidence 9999999999999999753 5789999999999999999999999 999999999999998876 79999999
Q ss_pred cceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhh
Q 047901 658 TAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINI 737 (786)
Q Consensus 658 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~ 737 (786)
+++...... ......||+.|+|| |+..+..++.++||||+||++|+|++|..||.... ...
T Consensus 165 ~a~~~~~~~-~~~~~~gt~~y~aP----------E~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~--------~~~ 225 (361)
T 2yab_A 165 LAHEIEDGV-EFKNIFGTPEFVAP----------EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--------KQE 225 (361)
T ss_dssp SCEECCTTC-CCCCCCSCGGGCCH----------HHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS--------HHH
T ss_pred CceEcCCCC-ccccCCCCccEECc----------hHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC--------HHH
Confidence 998876532 33456899999999 78888889999999999999999999999986422 223
Q ss_pred hhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 738 EFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
....+.......+...+...+..+.+++..||.+||++|||+.|+++
T Consensus 226 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 226 TLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 33444444444443333344556899999999999999999999985
No 51
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.3e-41 Score=362.42 Aligned_cols=266 Identities=31% Similarity=0.502 Sum_probs=214.8
Q ss_pred HHHhccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCee
Q 047901 502 IRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHS 581 (786)
Q Consensus 502 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~ 581 (786)
...+++|+..+.||+|+||+||+|+.++++.||||++... .....+.+.+|+++++.++||||+++++++...+..
T Consensus 35 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 110 (321)
T 2qkw_B 35 EEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPE----SSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEM 110 (321)
T ss_dssp CCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSC----CSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCC
T ss_pred HHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEeccc----ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeE
Confidence 3456789999999999999999999888999999998652 234567899999999999999999999999999999
Q ss_pred eEEEeccCCCCHHHHhhcCCC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccce
Q 047901 582 FVVYEYINRGSLATVLSNNFA-SEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAK 660 (786)
Q Consensus 582 ~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~ 660 (786)
++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 111 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~ 187 (321)
T 2qkw_B 111 ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISK 187 (321)
T ss_dssp EEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTCE
T ss_pred EEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeeccccc
Confidence 999999999999999975432 23689999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCC--cceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcch---
Q 047901 661 LLKPNSS--NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSI--- 735 (786)
Q Consensus 661 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~--- 735 (786)
....... ......||+.|+|| |...+..++.++|||||||++|||++|+.||.............
T Consensus 188 ~~~~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~ 257 (321)
T 2qkw_B 188 KGTELDQTHLSTVVKGTLGYIDP----------EYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257 (321)
T ss_dssp ECSSSSCCCCBCCCEEETTTCCH----------HHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTH
T ss_pred ccccccccccccccCCCccccCH----------HHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhh
Confidence 7643221 22345689999999 78888889999999999999999999999987533211110000
Q ss_pred ----hhhhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 736 ----NIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 736 ----~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
.......++.... .....+.+..+.+++.+||+.||++|||+.|+++.|
T Consensus 258 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L 310 (321)
T 2qkw_B 258 ESHNNGQLEQIVDPNLA--DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310 (321)
T ss_dssp HHHTTTCCCSSSSSSCT--TCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred hccccccHHHhcChhhc--cccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 0001111222221 122345667899999999999999999999999864
No 52
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.6e-42 Score=362.58 Aligned_cols=251 Identities=22% Similarity=0.290 Sum_probs=212.0
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|++.+.||+|+||+||+|+.. +++.||+|.+... ......+.+|+++++.++||||+++++++.+.+..++
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 78 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-----GTDQVLVKKEISILNIARHRNILHLHESFESMEELVM 78 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-----THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-----cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEE
Confidence 357999999999999999999865 6788999998642 2345678899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCC--CCcEEEecccccee
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDL--EYEARVSDFGTAKL 661 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~--~~~~kl~Dfg~a~~ 661 (786)
||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++.
T Consensus 79 v~e~~~g~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~ 153 (321)
T 1tki_A 79 IFEFISGLDIFERINTS--AFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQ 153 (321)
T ss_dssp EECCCCCCBHHHHHTSS--SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEE
T ss_pred EEEeCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeE
Confidence 99999999999999753 34689999999999999999999999 9999999999999987 78999999999998
Q ss_pred cCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhh
Q 047901 662 LKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNA 741 (786)
Q Consensus 662 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 741 (786)
.... .......||+.|+|| |...+..+++++||||+||++|||++|..||.... .......
T Consensus 154 ~~~~-~~~~~~~gt~~y~aP----------E~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~~~ 214 (321)
T 1tki_A 154 LKPG-DNFRLLFTAPEYYAP----------EVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET--------NQQIIEN 214 (321)
T ss_dssp CCTT-CEEEEEESCGGGSCH----------HHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHH
T ss_pred CCCC-CccccccCChhhcCc----------HHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCC--------HHHHHHH
Confidence 7643 334556899999999 77777788999999999999999999999986422 2333444
Q ss_pred hccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 742 MLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
+.......+.......+..+.+++.+||..||++|||+.|+++
T Consensus 215 i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 215 IMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 4444444443333344567899999999999999999999986
No 53
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.8e-41 Score=360.69 Aligned_cols=260 Identities=24% Similarity=0.353 Sum_probs=212.6
Q ss_pred cccHHHHHHHhcc----------CccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhc
Q 047901 495 KIMYEEIIRRTKD----------FDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI 563 (786)
Q Consensus 495 ~~~~~~~~~~~~~----------~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l 563 (786)
.++++++..+++. |+..+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|+.+++.+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l 99 (321)
T 2c30_A 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK----QQRRELLFNEVVIMRDY 99 (321)
T ss_dssp -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT----CCSHHHHHHHHHHHTTC
T ss_pred cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc----hhHHHHHHHHHHHHHhC
Confidence 4566777666653 677789999999999999876 79999999987522 23456788999999999
Q ss_pred CCCcccceeeEEecCCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCce
Q 047901 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNV 643 (786)
Q Consensus 564 ~hpniv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Ni 643 (786)
+||||+++++++...+..++||||+++|+|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+||
T Consensus 100 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NI 172 (321)
T 2c30_A 100 QHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ----VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSI 172 (321)
T ss_dssp CCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGE
T ss_pred CCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHE
Confidence 999999999999999999999999999999999864 4689999999999999999999999 999999999999
Q ss_pred eeCCCCcEEEeccccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCC
Q 047901 644 LLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGD 723 (786)
Q Consensus 644 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~ 723 (786)
+++.++.+||+|||+++.............||+.|+|| |...+..++.++|||||||++|||++|+.||.
T Consensus 173 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~Dv~slG~il~el~~g~~pf~ 242 (321)
T 2c30_A 173 LLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAP----------EVISRSLYATEVDIWSLGIMVIEMVDGEPPYF 242 (321)
T ss_dssp EECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCH----------HHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred EECCCCcEEEeeeeeeeecccCccccccccCCccccCH----------hhhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999998876544444556899999999 77888889999999999999999999999986
Q ss_pred ccccccCCCcchhhhhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 724 FLSLFSSSSSSINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.... ......+.....+.. ......+..+.+++.+||+.||++|||++|+++
T Consensus 243 ~~~~--------~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 243 SDSP--------VQAMKRLRDSPPPKL-KNSHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp TSCH--------HHHHHHHHHSSCCCC-TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCH--------HHHHHHHhcCCCCCc-CccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 4321 112222222211111 011122345889999999999999999999986
No 54
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.4e-41 Score=375.70 Aligned_cols=254 Identities=20% Similarity=0.287 Sum_probs=212.1
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|++.+.||+|+||+||+|... +++.||+|++.... ......+.+.+|+++++.++||||+++++++.+.+..|+
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~--~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKK--LSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCS--CHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEccc--CCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 567999999999999999999754 78899999987532 223445678999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeC---CCCcEEEeccccce
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLD---LEYEARVSDFGTAK 660 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~---~~~~~kl~Dfg~a~ 660 (786)
||||+++|+|.+++... +.+++..+..++.|++.||.|||+. +|+||||||+|||++ .++.+||+|||+|+
T Consensus 88 v~E~~~gg~L~~~i~~~---~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 88 IFDLVTGGELFEDIVAR---EYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp EECCCBCCBHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred EEEeCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 99999999999999864 5689999999999999999999999 999999999999998 46889999999998
Q ss_pred ecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhh
Q 047901 661 LLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFN 740 (786)
Q Consensus 661 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~ 740 (786)
.............||+.|+|| |+..+..++.++||||+||++|+|++|..||.... ......
T Consensus 162 ~~~~~~~~~~~~~gt~~Y~AP----------E~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~--------~~~~~~ 223 (444)
T 3soa_A 162 EVEGEQQAWFGFAGTPGYLSP----------EVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED--------QHRLYQ 223 (444)
T ss_dssp CCCTTCCBCCCSCSCGGGCCH----------HHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS--------HHHHHH
T ss_pred EecCCCceeecccCCcccCCH----------HHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCcc--------HHHHHH
Confidence 876655545567899999999 78888889999999999999999999999986422 223334
Q ss_pred hhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 741 AMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.+.......+...+...+..+.+++..||+.||++|||+.|+++
T Consensus 224 ~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 224 QIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp HHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 44444444333333334456899999999999999999999986
No 55
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1e-41 Score=363.95 Aligned_cols=251 Identities=23% Similarity=0.267 Sum_probs=209.3
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|+..+.||+|+||+||+|+.+ +++.||||++..... ........+.+|+.+++.++||||+++++++...+..|+
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 82 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVI-IAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF 82 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHh-hhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEE
Confidence 357999999999999999999865 689999999864210 012345678899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecC
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK 663 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 663 (786)
||||+++|+|.+++... +.+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+...
T Consensus 83 v~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 156 (337)
T 1o6l_A 83 VMEYANGGELFFHLSRE---RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156 (337)
T ss_dssp EEECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcc
Confidence 99999999999999764 5689999999999999999999999 99999999999999999999999999998755
Q ss_pred CCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhhc
Q 047901 664 PNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAML 743 (786)
Q Consensus 664 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 743 (786)
.........+||+.|+|| |+..+..++.++||||+||++|||++|+.||.... .......+.
T Consensus 157 ~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--------~~~~~~~i~ 218 (337)
T 1o6l_A 157 SDGATMKTFCGTPEYLAP----------EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--------HERLFELIL 218 (337)
T ss_dssp CTTCCBCCCEECGGGCCG----------GGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHH
T ss_pred cCCCcccccccChhhCCh----------hhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC--------HHHHHHHHH
Confidence 444445567899999999 66677789999999999999999999999986422 222333344
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 047901 744 DHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRP-----TMQTVCQ 784 (786)
Q Consensus 744 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RP-----t~~ev~~ 784 (786)
......|... +..+.+++..||++||++|| +++|+++
T Consensus 219 ~~~~~~p~~~----s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 219 MEEIRFPRTL----SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp HCCCCCCTTS----CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred cCCCCCCCCC----CHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 4444444332 23488999999999999999 8999875
No 56
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=2.9e-41 Score=366.12 Aligned_cols=254 Identities=23% Similarity=0.395 Sum_probs=207.4
Q ss_pred hccCccceeeccccCceEEEEEcC--------CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhc-CCCcccceeeEE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP--------SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGFC 575 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~ 575 (786)
.++|++.+.||+|+||+||+|+.. ++..||||++... ......+.+.+|+++++.+ +||||+++++++
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~ 156 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD---ATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 156 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTT---CBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEE
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCC---cCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence 357999999999999999999752 3457999999752 2344567899999999999 899999999999
Q ss_pred ecCCeeeEEEeccCCCCHHHHhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCc
Q 047901 576 SHVRHSFVVYEYINRGSLATVLSNNFA-------------SEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNN 642 (786)
Q Consensus 576 ~~~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~N 642 (786)
...+..|+||||+++|+|.+++..... ...+++..+..++.|++.||+|||++ +|+||||||+|
T Consensus 157 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~N 233 (370)
T 2psq_A 157 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARN 233 (370)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGG
T ss_pred ccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ceeccccchhh
Confidence 999999999999999999999986532 24589999999999999999999999 99999999999
Q ss_pred eeeCCCCcEEEeccccceecCCCCCc--ceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CC
Q 047901 643 VLLDLEYEARVSDFGTAKLLKPNSSN--WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GK 719 (786)
Q Consensus 643 ill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~ 719 (786)
||++.++.+||+|||+|+........ .....+|+.|+|| |+..+..++.++|||||||++|||++ |+
T Consensus 234 Ill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aP----------E~~~~~~~~~~~DvwslG~il~ellt~g~ 303 (370)
T 2psq_A 234 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP----------EALFDRVYTHQSDVWSFGVLMWEIFTLGG 303 (370)
T ss_dssp EEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCH----------HHHHTCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred EEECCCCCEEEccccCCcccCcccceecccCCCcccceECH----------hHhcCCCCCcHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999977543321 2234678899999 78888889999999999999999999 99
Q ss_pred CCCCccccccCCCcchhhhhhhhccC-CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 720 HPGDFLSLFSSSSSSINIEFNAMLDH-RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 720 ~Pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
.||..... ......+... +...+.. .+..+.+++..||+.||++|||+.|+++.|
T Consensus 304 ~p~~~~~~--------~~~~~~~~~~~~~~~~~~----~~~~l~~li~~~l~~dP~~Rpt~~ell~~L 359 (370)
T 2psq_A 304 SPYPGIPV--------EELFKLLKEGHRMDKPAN----CTNELYMMMRDCWHAVPSQRPTFKQLVEDL 359 (370)
T ss_dssp CSSTTCCG--------GGHHHHHHTTCCCCCCTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCCCCH--------HHHHHHHhcCCCCCCCCC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 99875321 1122222222 1222322 233588999999999999999999999864
No 57
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.3e-40 Score=352.46 Aligned_cols=275 Identities=31% Similarity=0.482 Sum_probs=221.6
Q ss_pred ccccHHHHHHHhccCccc------eeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCc
Q 047901 494 GKIMYEEIIRRTKDFDAK------YCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRN 567 (786)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~------~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpn 567 (786)
..+.++++...++.|... +.||+|+||+||+|.. +++.||||++............+.+.+|+.+++.++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 457788999999888877 8999999999999987 588999999976443334455678999999999999999
Q ss_pred ccceeeEEecCCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCC
Q 047901 568 IVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDL 647 (786)
Q Consensus 568 iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~ 647 (786)
|+++++++...+..++||||+++|+|.+++........+++..+..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDE 168 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECT
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcC
Confidence 9999999999999999999999999999997654456799999999999999999999999 9999999999999999
Q ss_pred CCcEEEeccccceecCCCCCc--ceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCcc
Q 047901 648 EYEARVSDFGTAKLLKPNSSN--WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFL 725 (786)
Q Consensus 648 ~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~ 725 (786)
++.+||+|||+++........ .....||+.|+|| |...+ .++.++||||||+++|||++|+.||...
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aP----------E~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~ 237 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAP----------EALRG-EITPKSDIYSFGVVLLEIITGLPAVDEH 237 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCH----------HHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTT
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCCh----------HHhcC-CCCccchhHHHHHHHHHHHHCCCCcccC
Confidence 999999999999876543222 2235789999999 65543 5789999999999999999999998754
Q ss_pred ccccCCCcc------hhhhhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 726 SLFSSSSSS------INIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 726 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
......... ........++..+.. .....+..+.+++..||+.||++|||+.+|++.|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L 301 (307)
T 2nru_A 238 REPQLLLDIKEEIEDEEKTIEDYIDKKMND---ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301 (307)
T ss_dssp BSSSBTTHHHHHHHTTSCCHHHHSCSSCSC---CCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHH
T ss_pred cchHHHHHHHHHhhhhhhhhhhhccccccc---cchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 321111000 001112223333321 2344556799999999999999999999999864
No 58
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=7e-42 Score=367.61 Aligned_cols=252 Identities=24% Similarity=0.333 Sum_probs=205.3
Q ss_pred HhccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhc-CCCcccceeeEEecCCee
Q 047901 504 RTKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHS 581 (786)
Q Consensus 504 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~ 581 (786)
..++|++.+.||+|+||+||+|+.+ +++.||||++..... ........+.+|..+++.+ +||||+++++++.+.+..
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~-~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 99 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVI-LQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL 99 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-HHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHh-cchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence 3568999999999999999999865 688999999864110 1123455678899999988 699999999999999999
Q ss_pred eEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEecccccee
Q 047901 582 FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKL 661 (786)
Q Consensus 582 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~ 661 (786)
|+||||+++|+|.+++... +.+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+|+.
T Consensus 100 ~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~ 173 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQKS---RRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKE 173 (353)
T ss_dssp EEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceee
Confidence 9999999999999999764 5689999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhh
Q 047901 662 LKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNA 741 (786)
Q Consensus 662 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 741 (786)
...........+||+.|+|| |++.+..++.++||||+||++|||++|+.||.... .......
T Consensus 174 ~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~--------~~~~~~~ 235 (353)
T 3txo_A 174 GICNGVTTATFCGTPDYIAP----------EILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN--------EDDLFEA 235 (353)
T ss_dssp SCC---------CCGGGCCH----------HHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHH
T ss_pred cccCCccccccCCCcCeECh----------hhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCC--------HHHHHHH
Confidence 55444445567899999999 78888889999999999999999999999987432 2334455
Q ss_pred hccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCH------HHHHH
Q 047901 742 MLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTM------QTVCQ 784 (786)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~------~ev~~ 784 (786)
+.......|.... ..+.+++..||.+||++||++ +|+++
T Consensus 236 i~~~~~~~p~~~~----~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 236 ILNDEVVYPTWLH----EDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp HHHCCCCCCTTSC----HHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred HHcCCCCCCCCCC----HHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 5555555554333 348899999999999999998 66654
No 59
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=6.2e-41 Score=385.30 Aligned_cols=383 Identities=18% Similarity=0.187 Sum_probs=308.0
Q ss_pred CCCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCC-CCCCCCCCcE
Q 047901 23 SSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFP-PICNLSNLKY 101 (786)
Q Consensus 23 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~ 101 (786)
..+...+++|+++|+++++ |..+. ++|++|+|++|+|+++.|.+|..+++|++|+|++|+|+++.+ .|..+++|++
T Consensus 28 ~~~~~~~~l~ls~~~L~~i-p~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 104 (562)
T 3a79_B 28 FSNELESMVDYSNRNLTHV-PKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEY 104 (562)
T ss_dssp -----CCEEECTTSCCCSC-CTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCE
T ss_pred cccCCCcEEEcCCCCCccC-CCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCE
Confidence 3445568999999999864 44443 799999999999998888999999999999999999998865 5899999999
Q ss_pred EEccCCcCcccCchhhcccCCcceecccccccccc-CChhhhccCccceeecccccccCCCCCcCCCCCC--cEEEccCc
Q 047901 102 ISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQ-LPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSL--VRAHLGRN 178 (786)
Q Consensus 102 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L--~~L~L~~N 178 (786)
|+|++|+|+.+++. .+++|++|+|++|++++. .|..|..+++|+.|++++|.++. ..+..+++| +.|++++|
T Consensus 105 L~Ls~N~l~~lp~~---~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~--~~~~~l~~L~L~~L~L~~n 179 (562)
T 3a79_B 105 LDVSHNRLQNISCC---PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ--LDLLPVAHLHLSCILLDLV 179 (562)
T ss_dssp EECTTSCCCEECSC---CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT--TTTGGGTTSCEEEEEEEES
T ss_pred EECCCCcCCccCcc---ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCcccc--CchhhhhhceeeEEEeecc
Confidence 99999999976655 899999999999999974 46899999999999999999986 345556666 99999999
Q ss_pred cc--ccccCcccCC--------------------------CCCCCEEeccCCcc--------------------------
Q 047901 179 NL--TGNISEDFGI--------------------------YPNLKFLDLSHNNF-------------------------- 204 (786)
Q Consensus 179 ~l--~~~~~~~f~~--------------------------l~~L~~L~L~~N~i-------------------------- 204 (786)
++ ++..+..|.. +++|+.|++++|+.
T Consensus 180 ~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~ 259 (562)
T 3a79_B 180 SYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHI 259 (562)
T ss_dssp SCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEE
T ss_pred cccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCC
Confidence 99 6666666554 44666667666631
Q ss_pred --c-----cccCcCccCCCCccEEEccCcccCCCCCccc-----cCCccccEEEeecccccccCC-CCcccc---ccccc
Q 047901 205 --Y-----GEISSNWGKCHRLGTLIVSGNNITGRIPPEI-----GNSSQLHVLDLSSNHIAGEIP-MELGRL---ISLNK 268 (786)
Q Consensus 205 --~-----~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-----~~l~~L~~L~Ls~N~i~~~~~-~~~~~l---~~L~~ 268 (786)
. ++.+ ....++|++|++++|++++.+|..+ ..++.|+.++++.|.+ .+| ..+..+ .+|+.
T Consensus 260 ~l~~~~~~~~~~--~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~ 335 (562)
T 3a79_B 260 ETTWKCSVKLFQ--FFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKM 335 (562)
T ss_dssp EECHHHHHHHHH--HHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSE
T ss_pred cCcHHHHHHHHH--hhhcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceE
Confidence 0 0000 1122489999999999998888877 7788888888888877 233 333332 57999
Q ss_pred ccccccccCCCCccccccCCcCceeccccccccccchhhhhcccCCcEEEecccccCCCc--chHHhhhcCcCeeeccCC
Q 047901 269 LILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQEI--PEDLALLAHLSELDLSHN 346 (786)
Q Consensus 269 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~N 346 (786)
|++++|.+.... ....+++|+.|++++|++++..+..+..+++|++|+|++|++++.. |..|..+++|+.|+|++|
T Consensus 336 L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N 413 (562)
T 3a79_B 336 LSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLN 413 (562)
T ss_dssp EEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTS
T ss_pred EEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCC
Confidence 999999987432 2378899999999999999988999999999999999999999744 466899999999999999
Q ss_pred ccCCCCC-cccccccccceeccccccccccCCcccccCCCceEEeccCCcccccCCCCCccccCCCccccCCCCCC
Q 047901 347 LFKGSIP-SRICNLESLEKLNLSHNNISGQIPACFIGMSGLLSIDISYNELRGPIPNSTVFRNAPRESFLGNNFST 421 (786)
Q Consensus 347 ~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~~ 421 (786)
++++.+| ..+..+++|+.|++++|++++..|..+. ++|+.|++++|+++..++............+.+|....
T Consensus 414 ~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~ 487 (562)
T 3a79_B 414 SLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQLKS 487 (562)
T ss_dssp CCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSSCCCC
T ss_pred cCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCcccChhhcCCCCCCEEECCCCCCCC
Confidence 9998344 5688999999999999999987776654 79999999999999765555555666677788888753
No 60
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.1e-41 Score=367.15 Aligned_cols=258 Identities=20% Similarity=0.245 Sum_probs=210.7
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCC-CCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeee
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPF-PNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSF 582 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~ 582 (786)
.++|++.+.||+|+||+||+|+.+ +++.||||++.... ........+.+.+|+++++.++||||+++++++...+..|
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 356999999999999999999864 78999999985311 0011123567899999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCc---EEEecccc
Q 047901 583 VVYEYINRGSLATVLSNNF-ASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYE---ARVSDFGT 658 (786)
Q Consensus 583 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~---~kl~Dfg~ 658 (786)
+||||+++|+|.+++.... ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 9999999999998886432 234589999999999999999999999 9999999999999986654 99999999
Q ss_pred ceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhh
Q 047901 659 AKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIE 738 (786)
Q Consensus 659 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~ 738 (786)
++.............||+.|+|| |...+..++.++||||+||++|||++|+.||.... ...
T Consensus 180 a~~~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~---------~~~ 240 (351)
T 3c0i_A 180 AIQLGESGLVAGGRVGTPHFMAP----------EVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK---------ERL 240 (351)
T ss_dssp CEECCTTSCBCCCCCSCGGGCCH----------HHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH---------HHH
T ss_pred eeEecCCCeeecCCcCCcCccCH----------HHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH---------HHH
Confidence 99876554444556899999999 78888889999999999999999999999986421 223
Q ss_pred hhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 739 FNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
...+.......+...+...+..+.+++.+||..||++|||+.|+++
T Consensus 241 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 241 FEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp HHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 3344444444333223334556899999999999999999999985
No 61
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.6e-41 Score=359.23 Aligned_cols=255 Identities=18% Similarity=0.266 Sum_probs=210.2
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCC--chhhHHHHHHHHHHHhhcCCCcccceeeEEecCCee
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPND--QMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHS 581 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~ 581 (786)
.+.|+..+.||+|+||+||+|+.. +++.||||++....... .....+.+.+|+++++.++||||+++++++......
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 346999999999999999999865 68999999987643221 112467899999999999999999999999999999
Q ss_pred eEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCC----cEEEeccc
Q 047901 582 FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEY----EARVSDFG 657 (786)
Q Consensus 582 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~----~~kl~Dfg 657 (786)
++||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 90 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 163 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163 (326)
T ss_dssp EEEEECCCSCBHHHHHTTS---SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEEcCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence 9999999999999999753 5689999999999999999999999 999999999999999887 89999999
Q ss_pred cceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhh
Q 047901 658 TAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINI 737 (786)
Q Consensus 658 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~ 737 (786)
+++...... ......||+.|+|| |+..+..++.++|||||||++|||++|+.||.... ...
T Consensus 164 ~a~~~~~~~-~~~~~~gt~~y~aP----------E~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~ 224 (326)
T 2y0a_A 164 LAHKIDFGN-EFKNIFGTPEFVAP----------EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--------KQE 224 (326)
T ss_dssp TCEECCTTS-CCCCCCSCTTTCCH----------HHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS--------HHH
T ss_pred CCeECCCCC-ccccccCCcCcCCc----------eeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC--------HHH
Confidence 998875432 23446799999999 77888889999999999999999999999986422 122
Q ss_pred hhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 738 EFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
....+.......+.......+..+.+++..||..||++|||+.|+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 225 TLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp HHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 22333333333332222333456889999999999999999999986
No 62
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2.4e-41 Score=367.47 Aligned_cols=259 Identities=22% Similarity=0.317 Sum_probs=208.7
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhc-CCCcccceeeEEecCCeee
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSF 582 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~ 582 (786)
.++|++.+.||+|+||+||+|+.+ +++.||||++...... .....+.+..|..++.++ +||||+++++++.+.+..|
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~-~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 129 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVN-DDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 129 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC-----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhcc-CHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence 457999999999999999999865 6788999998753221 122334677899999887 8999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceec
Q 047901 583 VVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLL 662 (786)
Q Consensus 583 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~ 662 (786)
+||||+++|+|.+++... +.+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|+..
T Consensus 130 lV~E~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~ 203 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 203 (396)
T ss_dssp EEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEcCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeec
Confidence 999999999999999864 5689999999999999999999999 9999999999999999999999999999875
Q ss_pred CCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCC-cchhhhhhh
Q 047901 663 KPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSS-SSINIEFNA 741 (786)
Q Consensus 663 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~-~~~~~~~~~ 741 (786)
..........+||+.|+|| |++.+..++.++||||+||++|||++|+.||.......... .........
T Consensus 204 ~~~~~~~~~~~gt~~Y~aP----------E~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~ 273 (396)
T 4dc2_A 204 LRPGDTTSTFCGTPNYIAP----------EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV 273 (396)
T ss_dssp CCTTCCBCCCCBCGGGCCH----------HHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHH
T ss_pred ccCCCccccccCCcccCCc----------hhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHH
Confidence 4444445567899999999 88888899999999999999999999999996432211111 111223344
Q ss_pred hccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCH------HHHHH
Q 047901 742 MLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTM------QTVCQ 784 (786)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~------~ev~~ 784 (786)
+.......|.... ..+.+++..||++||++||++ +|+++
T Consensus 274 i~~~~~~~p~~~s----~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~ 318 (396)
T 4dc2_A 274 ILEKQIRIPRSLS----VKAASVLKSFLNKDPKERLGCHPQTGFADIQG 318 (396)
T ss_dssp HHHCCCCCCTTSC----HHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH
T ss_pred HhccccCCCCcCC----HHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc
Confidence 4455555554333 348899999999999999996 56654
No 63
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=3.9e-41 Score=363.80 Aligned_cols=253 Identities=21% Similarity=0.324 Sum_probs=211.1
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|++.+.||+|+||+||+|..+ +++.||||++..... .....+.+.+|+++++.++||||+++++++.+.+..|+
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 105 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 467999999999999999999865 689999999975322 23455678999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCC---CcEEEeccccce
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLE---YEARVSDFGTAK 660 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~---~~~kl~Dfg~a~ 660 (786)
||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.+ +.+||+|||+++
T Consensus 106 v~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~ 179 (362)
T 2bdw_A 106 VFDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179 (362)
T ss_dssp EECCCCSCBHHHHHTTC---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCB
T ss_pred EEecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcce
Confidence 99999999999999754 5689999999999999999999999 99999999999999865 459999999998
Q ss_pred ecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhh
Q 047901 661 LLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFN 740 (786)
Q Consensus 661 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~ 740 (786)
...... ......||+.|+|| |+..+..++.++||||+||++|||++|+.||.... ......
T Consensus 180 ~~~~~~-~~~~~~gt~~y~aP----------E~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~--------~~~~~~ 240 (362)
T 2bdw_A 180 EVNDSE-AWHGFAGTPGYLSP----------EVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED--------QHRLYA 240 (362)
T ss_dssp CCTTCC-SCCCSCSCTTTCCH----------HHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHH
T ss_pred EecCCc-ccccCCCCccccCH----------HHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC--------HHHHHH
Confidence 776432 33456899999999 77888889999999999999999999999986422 122333
Q ss_pred hhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 741 AMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.+.......+...+...+..+.+++.+||..||++|||+.|+++
T Consensus 241 ~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 241 QIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp HHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 33444444343333344556899999999999999999999875
No 64
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.1e-40 Score=373.96 Aligned_cols=348 Identities=25% Similarity=0.351 Sum_probs=305.1
Q ss_pred CCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCCCCCCCCCCcEEE
Q 047901 24 SFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFPPICNLSNLKYIS 103 (786)
Q Consensus 24 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~ 103 (786)
.+++++.|++++|.+..+ | .+..+++|++|+|++|+++++.+ |..+++|++|+|++|++++.++ +..+++|++|+
T Consensus 44 ~l~~l~~L~l~~~~i~~l-~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~ 118 (466)
T 1o6v_A 44 DLDQVTTLQADRLGIKSI-D-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP-LANLTNLTGLT 118 (466)
T ss_dssp HHHTCCEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG-GTTCTTCCEEE
T ss_pred HhccccEEecCCCCCccC-c-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh-hcCCCCCCEEE
Confidence 467899999999999754 3 38889999999999999986654 8999999999999999987766 88999999999
Q ss_pred ccCCcCcccCchhhcccCCcceeccccccccccCChhhhccCccceeecccccccCCCCCcCCCCCCcEEEccCcccccc
Q 047901 104 LHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGN 183 (786)
Q Consensus 104 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~ 183 (786)
|++|+++++.+ |.++++|++|++++|++++. + .+..+++|+.|+++ |.+.... .+.++++|+.|++++|.++.+
T Consensus 119 L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~~-~~~~l~~L~~L~l~~n~l~~~ 192 (466)
T 1o6v_A 119 LFNNQITDIDP--LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDLK-PLANLTTLERLDISSNKVSDI 192 (466)
T ss_dssp CCSSCCCCCGG--GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCCG-GGTTCTTCCEEECCSSCCCCC
T ss_pred CCCCCCCCChH--HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-CcccCch-hhccCCCCCEEECcCCcCCCC
Confidence 99999997654 89999999999999999853 3 58889999999996 5555443 488999999999999999876
Q ss_pred cCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCCCCcccc
Q 047901 184 ISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRL 263 (786)
Q Consensus 184 ~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l 263 (786)
..+..+++|++|++++|++.++.+ +..+++|++|++++|+++++ +.+..+++|+.|++++|.+.+..+ +..+
T Consensus 193 --~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l 264 (466)
T 1o6v_A 193 --SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGL 264 (466)
T ss_dssp --GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTC
T ss_pred --hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcC
Confidence 358899999999999999998766 78899999999999999864 578899999999999999987655 8899
Q ss_pred cccccccccccccCCCCccccccCCcCceeccccccccccchhhhhcccCCcEEEecccccCCCcchHHhhhcCcCeeec
Q 047901 264 ISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQEIPEDLALLAHLSELDL 343 (786)
Q Consensus 264 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 343 (786)
++|+.|++++|.+++..+ +..+++|+.|++++|++.++.+ +..+++|++|++++|++++..| +..+++|+.|++
T Consensus 265 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l 338 (466)
T 1o6v_A 265 TKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFF 338 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEEC
T ss_pred CCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeEC
Confidence 999999999999997655 8899999999999999998765 8899999999999999998766 789999999999
Q ss_pred cCCccCCCCCcccccccccceeccccccccccCCcccccCCCceEEeccCCcccccC
Q 047901 344 SHNLFKGSIPSRICNLESLEKLNLSHNNISGQIPACFIGMSGLLSIDISYNELRGPI 400 (786)
Q Consensus 344 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 400 (786)
++|++++. ..+.++++|+.|++++|++++..| +..+++|+.|++++|++++.+
T Consensus 339 ~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~~p 391 (466)
T 1o6v_A 339 YNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAP 391 (466)
T ss_dssp CSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEECCC
T ss_pred CCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccCCc
Confidence 99999965 578999999999999999998887 889999999999999998743
No 65
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=3.3e-41 Score=359.71 Aligned_cols=252 Identities=20% Similarity=0.281 Sum_probs=198.5
Q ss_pred hccCccceeeccccCceEEEEEc----CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCe
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKL----PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRH 580 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~ 580 (786)
.++|++.+.||+|+||+||+|+. .+++.||+|++..............+.+|+++++.++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46799999999999999999986 47889999999764322233345568899999999999999999999999999
Q ss_pred eeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccce
Q 047901 581 SFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAK 660 (786)
Q Consensus 581 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~ 660 (786)
.|+||||+++|+|.+++... +.+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 169 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLERE---GIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCK 169 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred EEEEEeCCCCCcHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccc
Confidence 99999999999999999764 4688999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhh
Q 047901 661 LLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFN 740 (786)
Q Consensus 661 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~ 740 (786)
.............||+.|+|| |...+..++.++|||||||++|||++|+.||.... ......
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--------~~~~~~ 231 (327)
T 3a62_A 170 ESIHDGTVTHTFCGTIEYMAP----------EILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN--------RKKTID 231 (327)
T ss_dssp ---------CTTSSCCTTSCH----------HHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--------HHHHHH
T ss_pred ccccCCccccccCCCcCccCH----------hhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCC--------HHHHHH
Confidence 654443334456799999999 77878889999999999999999999999987432 223334
Q ss_pred hhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 047901 741 AMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRP-----TMQTVCQ 784 (786)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RP-----t~~ev~~ 784 (786)
.+.......|.... ..+.+++.+||..||++|| ++.|+++
T Consensus 232 ~i~~~~~~~p~~~~----~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 232 KILKCKLNLPPYLT----QEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp HHHHTCCCCCTTSC----HHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred HHHhCCCCCCCCCC----HHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 44444444443322 3488999999999999999 7778765
No 66
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=5.2e-41 Score=357.90 Aligned_cols=252 Identities=25% Similarity=0.422 Sum_probs=204.2
Q ss_pred hccCccceeeccccCceEEEEEcC----CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCe
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP----SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRH 580 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~ 580 (786)
.++|++.+.||+|+||+||+|+.. .+..||||++... ......+.|.+|+++++.++||||+++++++.+.+.
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 124 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAG---YTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRL 124 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTT---CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGC
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCC---CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCc
Confidence 357889999999999999999864 3345999999752 234456789999999999999999999999999999
Q ss_pred eeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccce
Q 047901 581 SFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAK 660 (786)
Q Consensus 581 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~ 660 (786)
.++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 199 (325)
T 3kul_A 125 AMIVTEYMENGSLDTFLRTH--DGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSR 199 (325)
T ss_dssp CEEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred cEEEeeCCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCccc
Confidence 99999999999999999754 35699999999999999999999999 99999999999999999999999999999
Q ss_pred ecCCCCCc---ceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCccccccCCCcchh
Q 047901 661 LLKPNSSN---WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFLSLFSSSSSSIN 736 (786)
Q Consensus 661 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~ 736 (786)
........ .....+|+.|+|| |...+..++.++|||||||++|||++ |+.||..... .
T Consensus 200 ~~~~~~~~~~~~~~~~~t~~y~aP----------E~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--------~ 261 (325)
T 3kul_A 200 VLEDDPDAAYTTTGGKIPIRWTAP----------EAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN--------R 261 (325)
T ss_dssp ECC----CCEECC---CCGGGSCH----------HHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH--------H
T ss_pred ccccCccceeeccCCCCcccccCH----------hHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH--------H
Confidence 87644322 1223567789999 78888889999999999999999999 9999864321 1
Q ss_pred hhhhhhccC-CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 737 IEFNAMLDH-RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 737 ~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
.....+... +...+.. .+..+.+++..||..||++|||+.||++.|
T Consensus 262 ~~~~~~~~~~~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~eil~~L 308 (325)
T 3kul_A 262 DVISSVEEGYRLPAPMG----CPHALHQLMLDCWHKDRAQRPRFSQIVSVL 308 (325)
T ss_dssp HHHHHHHTTCCCCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCC----cCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 222222222 2222222 234588999999999999999999999864
No 67
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=6.6e-41 Score=358.72 Aligned_cols=251 Identities=20% Similarity=0.370 Sum_probs=204.0
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCC----
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVR---- 579 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~---- 579 (786)
.++|+..+.||+|+||+||+|+.. +++.||||++.... .....+.+.+|++++++++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 81 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN---RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKW 81 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS---TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC---chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchh
Confidence 467999999999999999999876 78999999997532 2345678999999999999999999999885433
Q ss_pred -----------------------------------------------------eeeEEEeccCCCCHHHHhhcCCCCCCC
Q 047901 580 -----------------------------------------------------HSFVVYEYINRGSLATVLSNNFASEDF 606 (786)
Q Consensus 580 -----------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~~~~~~ 606 (786)
..++||||+++|+|.+++.........
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~ 161 (332)
T 3qd2_B 82 QEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDR 161 (332)
T ss_dssp HHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGS
T ss_pred hhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccch
Confidence 379999999999999999877655667
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecCCCCC------------cceeecc
Q 047901 607 DWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSS------------NWTELVG 674 (786)
Q Consensus 607 ~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~------------~~~~~~g 674 (786)
++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....... ......|
T Consensus 162 ~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~g 238 (332)
T 3qd2_B 162 EHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVG 238 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-
T ss_pred hhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCC
Confidence 8888999999999999999999 999999999999999999999999999998765421 1233579
Q ss_pred CccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhhccCCCCCCChhH
Q 047901 675 TFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAMLDHRLPHPSLDV 754 (786)
Q Consensus 675 t~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 754 (786)
|+.|+|| |...+..++.++|||||||++|||++|..|+.. ............. +...
T Consensus 239 t~~y~aP----------E~~~~~~~~~~~Di~slG~il~el~~~~~~~~~----------~~~~~~~~~~~~~---~~~~ 295 (332)
T 3qd2_B 239 TKLYMSP----------EQIHGNNYSHKVDIFSLGLILFELLYSFSTQME----------RVRIITDVRNLKF---PLLF 295 (332)
T ss_dssp CGGGSCH----------HHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH----------HHHHHHHHHTTCC---CHHH
T ss_pred CcCccCh----------HHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH----------HHHHHHHhhccCC---Cccc
Confidence 9999999 788888899999999999999999999887321 1111122222221 2233
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 755 QEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 755 ~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
......+.+++..||+.||++|||++|+++
T Consensus 296 ~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 296 TQKYPQEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred ccCChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence 444566889999999999999999999986
No 68
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=6.5e-41 Score=359.40 Aligned_cols=259 Identities=22% Similarity=0.314 Sum_probs=209.7
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhc-CCCcccceeeEEecCCeee
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSF 582 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~ 582 (786)
.++|+..+.||+|+||.||+|+.+ +++.||||++..... ......+.+.+|..+++++ +||||+++++++.+.+..|
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 86 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELV-NDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 86 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGS-CSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHh-cchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEE
Confidence 357999999999999999999865 688999999975322 2234456788999999988 8999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceec
Q 047901 583 VVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLL 662 (786)
Q Consensus 583 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~ 662 (786)
+||||+++|+|.+++... +.+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|+..
T Consensus 87 lv~e~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~ 160 (345)
T 3a8x_A 87 FVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 160 (345)
T ss_dssp EEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred EEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccc
Confidence 999999999999999764 4689999999999999999999999 9999999999999999999999999999875
Q ss_pred CCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCC-cchhhhhhh
Q 047901 663 KPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSS-SSINIEFNA 741 (786)
Q Consensus 663 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~-~~~~~~~~~ 741 (786)
..........+||+.|+|| |+..+..++.++||||+||++|||++|+.||.......... .........
T Consensus 161 ~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 230 (345)
T 3a8x_A 161 LRPGDTTSTFCGTPNYIAP----------EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV 230 (345)
T ss_dssp CCTTCCBCCCCSCGGGCCH----------HHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHH
T ss_pred cCCCCcccccCCCccccCc----------cccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHH
Confidence 4444445567899999999 78888889999999999999999999999996432111111 111222333
Q ss_pred hccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCH------HHHHH
Q 047901 742 MLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTM------QTVCQ 784 (786)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~------~ev~~ 784 (786)
+.......|... +..+.+++.+||+.||++||++ +|+++
T Consensus 231 i~~~~~~~p~~~----s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~ 275 (345)
T 3a8x_A 231 ILEKQIRIPRSL----SVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 275 (345)
T ss_dssp HHHCCCCCCTTS----CHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHT
T ss_pred HHcCCCCCCCCC----CHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhc
Confidence 444444444332 2348899999999999999996 56653
No 69
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.9e-41 Score=356.06 Aligned_cols=255 Identities=24% Similarity=0.319 Sum_probs=202.6
Q ss_pred ccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeEE
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVV 584 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 584 (786)
++|++.+.||+|+||+||+|+.. +++.||+|++..... ......+.+.+|+.++++++||||+++++++...+..|+|
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPR-EKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSS-CCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCcc-ccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 57999999999999999999854 788999999865332 3344567899999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecCC
Q 047901 585 YEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKP 664 (786)
Q Consensus 585 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 664 (786)
|||+++|+|.+++... +.+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 90 ~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 163 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESH---GPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE 163 (294)
T ss_dssp EECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC--
T ss_pred EeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCcccccc
Confidence 9999999999999765 4689999999999999999999999 999999999999999999999999999987654
Q ss_pred CCC-cceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhhc
Q 047901 665 NSS-NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAML 743 (786)
Q Consensus 665 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 743 (786)
... ......||+.|+|| |...+..++.++||||+|+++|||++|+.||..... ........
T Consensus 164 ~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~--------~~~~~~~~ 225 (294)
T 4eqm_A 164 TSLTQTNHVLGTVQYFSP----------EQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA--------VSIAIKHI 225 (294)
T ss_dssp -----------CCSSCCH----------HHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCH--------HHHHHHHH
T ss_pred ccccccCccccCccccCH----------hHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh--------HHHHHHHh
Confidence 322 22345799999999 788888899999999999999999999999875321 11112222
Q ss_pred cCCCCCC-ChhHHHHHHHHHHHHHhccCCCCCCCC-CHHHHHHh
Q 047901 744 DHRLPHP-SLDVQEKLISIMEVALLCLDGCPNSRP-TMQTVCQL 785 (786)
Q Consensus 744 ~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~RP-t~~ev~~~ 785 (786)
....+.. .......+..+.+++.+||.+||++|| +++++.+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~ 269 (294)
T 4eqm_A 226 QDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDD 269 (294)
T ss_dssp SSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHH
T ss_pred hccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHH
Confidence 2222110 001112234588999999999999999 88887764
No 70
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=8.4e-41 Score=355.74 Aligned_cols=259 Identities=21% Similarity=0.303 Sum_probs=207.4
Q ss_pred ccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCC--eee
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVR--HSF 582 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~--~~~ 582 (786)
++|.+.+.||+|+||+||+|+.. +++.||||++... ......+.+.+|++++++++||||+++++++.... ..+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 85 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNI---SFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGG---GGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccc---cccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEE
Confidence 57999999999999999999865 5899999998642 12234567889999999999999999999987655 779
Q ss_pred EEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceee----CCCCcEEEecccc
Q 047901 583 VVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLL----DLEYEARVSDFGT 658 (786)
Q Consensus 583 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill----~~~~~~kl~Dfg~ 658 (786)
+||||+++|+|.+++........+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+
T Consensus 86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~ 162 (319)
T 4euu_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (319)
T ss_dssp EEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCC
Confidence 9999999999999998764445599999999999999999999999 99999999999999 7888999999999
Q ss_pred ceecCCCCCcceeeccCccccCCCCCCCCchHHHHhh--------hcCcCcccchHHHHHHHHHHHhCCCCCCccccccC
Q 047901 659 AKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAY--------TMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSS 730 (786)
Q Consensus 659 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~--------~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~ 730 (786)
|+...... ......||+.|+|| |+.. +..++.++|||||||++|||++|+.||.......
T Consensus 163 a~~~~~~~-~~~~~~gt~~y~aP----------E~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~- 230 (319)
T 4euu_A 163 ARELEDDE-QFVSLYGTEEYLHP----------DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR- 230 (319)
T ss_dssp CEECCTTC-CBCCCCSCGGGCCH----------HHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGG-
T ss_pred ceecCCCC-ceeecccCCCccCH----------HHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccc-
Confidence 99876543 23445799999999 5554 4678999999999999999999999986432111
Q ss_pred CCcchhhhhhhhccC---------------------CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHh
Q 047901 731 SSSSINIEFNAMLDH---------------------RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQL 785 (786)
Q Consensus 731 ~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 785 (786)
........+... ..+.+..........+.+++..||+.||++|||++|+++.
T Consensus 231 ---~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h 303 (319)
T 4euu_A 231 ---RNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE 303 (319)
T ss_dssp ---GCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHH
T ss_pred ---hhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhc
Confidence 111111111111 1122222335566678999999999999999999999874
No 71
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=3.9e-41 Score=355.31 Aligned_cols=253 Identities=25% Similarity=0.389 Sum_probs=197.9
Q ss_pred hccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhh--cCCCcccceeeEEec----C
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTK--IRHRNIVKFYGFCSH----V 578 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~--l~hpniv~l~~~~~~----~ 578 (786)
.++|+..+.||+|+||+||+|+. +++.||||++.. .....+..|.+++.. ++||||+++++++.. .
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~-------~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~ 78 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSS-------RDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSS 78 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECG-------GGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecc-------ccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCC
Confidence 46799999999999999999988 588999999854 234566677777766 799999999998644 3
Q ss_pred CeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHh--------hCCCCCeEEcCCCCCceeeCCCCc
Q 047901 579 RHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH--------HDCFPPIVHRDISSNNVLLDLEYE 650 (786)
Q Consensus 579 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivHrdlk~~Nill~~~~~ 650 (786)
...++||||+++|+|.++++. ..+++..+..++.|++.||+||| +. +|+||||||+||+++.++.
T Consensus 79 ~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~ 151 (301)
T 3q4u_A 79 TQLWLITHYHEMGSLYDYLQL----TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQ 151 (301)
T ss_dssp EEEEEEECCCTTCBHHHHHTT----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSC
T ss_pred ceeEEehhhccCCCHHHHHhh----cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCC
Confidence 568999999999999999953 46899999999999999999999 77 9999999999999999999
Q ss_pred EEEeccccceecCCCCCc----ceeeccCccccCCCCCCCCchHHHHhhhc------CcCcccchHHHHHHHHHHHhC--
Q 047901 651 ARVSDFGTAKLLKPNSSN----WTELVGTFGYVAPAHGNIGLHLAELAYTM------KITEKCDVYSFGVLALEVIKG-- 718 (786)
Q Consensus 651 ~kl~Dfg~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~e~~~~~------~~~~~sDvwslGvil~elltg-- 718 (786)
+||+|||+|+........ .....||+.|+|| |...+. .+++++|||||||++|||+||
T Consensus 152 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~ 221 (301)
T 3q4u_A 152 CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP----------EVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMV 221 (301)
T ss_dssp EEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCH----------HHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred EEEeeCCCeeecccccccccccccccccccceeCh----------hhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhc
Confidence 999999999876544332 2234799999999 666554 456799999999999999999
Q ss_pred --------CCCCCccccccCCCcchhhhhhhhcc---CCCCCCCh-hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 719 --------KHPGDFLSLFSSSSSSINIEFNAMLD---HRLPHPSL-DVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 719 --------~~Pf~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
+.||....... ........... .+...+.. .....+..+.+++..||+.||++|||+.||++.|
T Consensus 222 ~~~~~~~~~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L 297 (301)
T 3q4u_A 222 SNGIVEDYKPPFYDVVPND----PSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTL 297 (301)
T ss_dssp BTTBCCCCCCTTTTTSCSS----CCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHH
T ss_pred CccccccccccccccCCCC----cchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHH
Confidence 77765322111 11111222211 11222221 2234566799999999999999999999999864
No 72
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=9.9e-41 Score=353.50 Aligned_cols=257 Identities=21% Similarity=0.267 Sum_probs=201.9
Q ss_pred hccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeEE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVV 584 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 584 (786)
.++|++.+.||+|+||+||+|+..+++.||||++.... ......+.+.+|+++++.++||||+++++++...+..++|
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 97 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDA--EDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLV 97 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC--------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEeccc--ccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEE
Confidence 36799999999999999999998889999999997532 2223456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecCC
Q 047901 585 YEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKP 664 (786)
Q Consensus 585 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 664 (786)
|||+++ +|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|+....
T Consensus 98 ~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 171 (311)
T 3niz_A 98 FEFMEK-DLKKVLDEN--KTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGI 171 (311)
T ss_dssp EECCSE-EHHHHHHTC--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTS
T ss_pred EcCCCC-CHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCC
Confidence 999985 888888754 35689999999999999999999999 999999999999999999999999999998765
Q ss_pred CCCcceeeccCccccCCCCCCCCchHHHHhhh-cCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhhc
Q 047901 665 NSSNWTELVGTFGYVAPAHGNIGLHLAELAYT-MKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAML 743 (786)
Q Consensus 665 ~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~-~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 743 (786)
.........||+.|+|| |...+ ..++.++||||+||++|||++|+.||....... .........
T Consensus 172 ~~~~~~~~~~t~~y~aP----------E~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-----~~~~i~~~~ 236 (311)
T 3niz_A 172 PVRSYTHEVVTLWYRAP----------DVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-----QLPKIFSIL 236 (311)
T ss_dssp CCC---CCCCCCTTCCH----------HHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-----HHHHHHHHH
T ss_pred CcccccCCcccCCcCCH----------HHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-----HHHHHHHHH
Confidence 54455566899999999 66654 568999999999999999999999987533210 000000000
Q ss_pred c------------------CCCCC-CChhH----HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 744 D------------------HRLPH-PSLDV----QEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 744 ~------------------~~~~~-~~~~~----~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
. ..... ..... .....++.+++.+||..||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 237 GTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp CCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred CCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0 00000 00000 112245889999999999999999999986
No 73
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=2.4e-41 Score=368.22 Aligned_cols=251 Identities=24% Similarity=0.398 Sum_probs=206.3
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|...+.||+|+||+||+|++. +++.||||++... ......+.|.+|++++++++||||+++++++...+..++
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 189 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET---LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTT---SCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEcccc---CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEE
Confidence 467999999999999999999976 7899999998752 223345578899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecC
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK 663 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 663 (786)
||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+...
T Consensus 190 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~ 264 (377)
T 3cbl_A 190 VMELVQGGDFLTFLRTE--GARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEA 264 (377)
T ss_dssp EEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECT
T ss_pred EEEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecC
Confidence 99999999999999754 34689999999999999999999999 99999999999999999999999999998754
Q ss_pred CCCCcc--eeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCccccccCCCcchhhhhh
Q 047901 664 PNSSNW--TELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFLSLFSSSSSSINIEFN 740 (786)
Q Consensus 664 ~~~~~~--~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~ 740 (786)
...... ....++..|+|| |......++.++|||||||++|||+| |..||..... ....
T Consensus 265 ~~~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~---------~~~~ 325 (377)
T 3cbl_A 265 DGVYAASGGLRQVPVKWTAP----------EALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN---------QQTR 325 (377)
T ss_dssp TSEEECCSSCCEEEGGGSCH----------HHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH---------HHHH
T ss_pred CCceeecCCCCCCCcCcCCH----------hHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH---------HHHH
Confidence 332111 122457789999 78888889999999999999999998 9999875321 1122
Q ss_pred hhcc--CCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 741 AMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 741 ~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
..+. .+.+.|... +..+.++|..||+.||++|||++++++.|
T Consensus 326 ~~~~~~~~~~~~~~~----~~~l~~li~~cl~~dP~~Rps~~~i~~~L 369 (377)
T 3cbl_A 326 EFVEKGGRLPCPELC----PDAVFRLMEQCWAYEPGQRPSFSTIYQEL 369 (377)
T ss_dssp HHHHTTCCCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHcCCCCCCCCCC----CHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence 2222 223333322 23588999999999999999999999864
No 74
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.2e-40 Score=371.46 Aligned_cols=344 Identities=26% Similarity=0.358 Sum_probs=308.1
Q ss_pred CeEEEEcCCCCCcccCCcCccCCCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeC
Q 047901 2 RVNSINLTSTGLKGTLQEFSFSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDL 81 (786)
Q Consensus 2 ~~~~l~l~~~~l~~~l~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 81 (786)
+|+.|+++++++. .++. |..+++|++|||++|.++++.+ |.++++|++|+|++|+++++.+ |..+++|++|+|
T Consensus 47 ~l~~L~l~~~~i~-~l~~--~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L 119 (466)
T 1o6v_A 47 QVTTLQADRLGIK-SIDG--VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL 119 (466)
T ss_dssp TCCEEECCSSCCC-CCTT--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred cccEEecCCCCCc-cCcc--hhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEEC
Confidence 5789999999987 5765 7889999999999999987765 9999999999999999997655 999999999999
Q ss_pred CCccCcccCCCCCCCCCCcEEEccCCcCcccCchhhcccCCcceeccccccccccCChhhhccCccceeecccccccCCC
Q 047901 82 SLNQFSGTFPPICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSI 161 (786)
Q Consensus 82 s~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~ 161 (786)
++|++++.++ +..+++|++|+|++|+++++. .+.++++|++|+++ |.+.+.. .+..+++|+.|++++|.+...
T Consensus 120 ~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~~- 192 (466)
T 1o6v_A 120 FNNQITDIDP-LKNLTNLNRLELSSNTISDIS--ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSDI- 192 (466)
T ss_dssp CSSCCCCCGG-GTTCTTCSEEEEEEEEECCCG--GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCCC-
T ss_pred CCCCCCCChH-HcCCCCCCEEECCCCccCCCh--hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCCC-
Confidence 9999998765 889999999999999999653 59999999999997 5665433 389999999999999999875
Q ss_pred CCcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCcc
Q 047901 162 PNLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQ 241 (786)
Q Consensus 162 ~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 241 (786)
+.+..+++|+.|++++|+++++.+ ++.+++|++|++++|+++++ ..+..+++|+.|++++|.+++..+ +..+++
T Consensus 193 ~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~ 266 (466)
T 1o6v_A 193 SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTK 266 (466)
T ss_dssp GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTT
T ss_pred hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCC
Confidence 458899999999999999998765 78899999999999999875 468899999999999999997644 899999
Q ss_pred ccEEEeecccccccCCCCcccccccccccccccccCCCCccccccCCcCceeccccccccccchhhhhcccCCcEEEecc
Q 047901 242 LHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSH 321 (786)
Q Consensus 242 L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 321 (786)
|+.|++++|.+++..+ +..+++|+.|++++|+++++.+ +..+++|+.|++++|+++++.+ +..+++|++|++++
T Consensus 267 L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~ 340 (466)
T 1o6v_A 267 LTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYN 340 (466)
T ss_dssp CSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCS
T ss_pred CCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCC
Confidence 9999999999997654 8899999999999999997655 8899999999999999998765 78999999999999
Q ss_pred cccCCCcchHHhhhcCcCeeeccCCccCCCCCcccccccccceecccccccccc
Q 047901 322 NQFSQEIPEDLALLAHLSELDLSHNLFKGSIPSRICNLESLEKLNLSHNNISGQ 375 (786)
Q Consensus 322 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 375 (786)
|++++. ..+..+++|+.|++++|++++..| +..+++|+.|++++|++++.
T Consensus 341 n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~~ 390 (466)
T 1o6v_A 341 NKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNA 390 (466)
T ss_dssp SCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEECC
T ss_pred CccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccCC
Confidence 999876 478999999999999999997766 89999999999999999974
No 75
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=3.3e-41 Score=359.29 Aligned_cols=250 Identities=24% Similarity=0.312 Sum_probs=189.0
Q ss_pred ceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcC-CCcccceeeEEecCCeeeEEEecc
Q 047901 511 KYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIR-HRNIVKFYGFCSHVRHSFVVYEYI 588 (786)
Q Consensus 511 ~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-hpniv~l~~~~~~~~~~~lv~e~~ 588 (786)
.+.||+|+||+||+|+.. +++.||||++.. .....+.+|+.+++.+. ||||+++++++.+....|+||||+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~-------~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~ 88 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISK-------RMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELL 88 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEG-------GGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEECh-------hhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEcc
Confidence 478999999999999865 689999999853 24467789999999997 999999999999999999999999
Q ss_pred CCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCC---cEEEeccccceecCCC
Q 047901 589 NRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEY---EARVSDFGTAKLLKPN 665 (786)
Q Consensus 589 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~---~~kl~Dfg~a~~~~~~ 665 (786)
++|+|.+++... +.+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++.....
T Consensus 89 ~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 162 (325)
T 3kn6_A 89 NGGELFERIKKK---KHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD 162 (325)
T ss_dssp CSCBHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-
T ss_pred CCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCC
Confidence 999999999864 5789999999999999999999999 999999999999997665 8999999999987655
Q ss_pred CCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhhccC
Q 047901 666 SSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAMLDH 745 (786)
Q Consensus 666 ~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 745 (786)
........||+.|+|| |...+..++.++||||+||++|||++|+.||....... ...........+...
T Consensus 163 ~~~~~~~~~t~~y~aP----------E~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~~~~~~~~i~~~ 231 (325)
T 3kn6_A 163 NQPLKTPCFTLHYAAP----------ELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSL-TCTSAVEIMKKIKKG 231 (325)
T ss_dssp -------------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC--------CCCHHHHHHHHTTT
T ss_pred CCcccccCCCcCccCH----------HHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcccc-ccccHHHHHHHHHcC
Confidence 5555567899999999 66667789999999999999999999999987543211 111223334445555
Q ss_pred CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 746 RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 746 ~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
....+...+...+..+.+++..||..||++|||++|+++
T Consensus 232 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 232 DFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp CCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred CCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 555555444555667999999999999999999999874
No 76
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.5e-41 Score=361.93 Aligned_cols=253 Identities=23% Similarity=0.310 Sum_probs=207.7
Q ss_pred HHhccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhc-CCCcccceeeEEecCCe
Q 047901 503 RRTKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRH 580 (786)
Q Consensus 503 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~ 580 (786)
...++|+..+.||+|+||+||+|+.+ +++.||||++..... ......+.+..|..++..+ +||||+++++++.+.+.
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVV-LMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHh-hhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 34578999999999999999999875 688999999864210 0112345678899999877 89999999999999999
Q ss_pred eeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccce
Q 047901 581 SFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAK 660 (786)
Q Consensus 581 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~ 660 (786)
.|+||||+++|+|.+++... +.+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+|+
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~ 166 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSC---HKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK 166 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhh
Confidence 99999999999999999764 4689999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhh
Q 047901 661 LLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFN 740 (786)
Q Consensus 661 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~ 740 (786)
............+||+.|+|| |+..+..++.++||||+||++|||++|+.||.... ......
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--------~~~~~~ 228 (345)
T 1xjd_A 167 ENMLGDAKTNTFCGTPDYIAP----------EILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD--------EEELFH 228 (345)
T ss_dssp CCCCTTCCBCCCCSCGGGCCH----------HHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHH
T ss_pred hcccCCCcccCCCCCcccCCh----------hhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCC--------HHHHHH
Confidence 755444445567899999999 78888889999999999999999999999987432 122333
Q ss_pred hhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHH-HHHH
Q 047901 741 AMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQ-TVCQ 784 (786)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~-ev~~ 784 (786)
.+.......|... +..+.+++.+||..||++||++. |+++
T Consensus 229 ~i~~~~~~~p~~~----s~~~~~li~~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 229 SIRMDNPFYPRWL----EKEAKDLLVKLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp HHHHCCCCCCTTS----CHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred HHHhCCCCCCccc----CHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence 3333333333322 23588999999999999999997 6653
No 77
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.2e-40 Score=345.27 Aligned_cols=250 Identities=26% Similarity=0.440 Sum_probs=206.8
Q ss_pred hccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeEE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVV 584 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 584 (786)
.++|+..+.||+|+||+||+|+.+++..||||++... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEG-----SMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIV 81 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBT-----TBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccC-----CCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEE
Confidence 4679999999999999999999988889999999652 12346789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecCC
Q 047901 585 YEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKP 664 (786)
Q Consensus 585 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 664 (786)
|||+++++|.+++... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++....
T Consensus 82 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 156 (268)
T 3sxs_A 82 TEYISNGCLLNYLRSH--GKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD 156 (268)
T ss_dssp EECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCT
T ss_pred EEccCCCcHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecch
Confidence 9999999999999764 34589999999999999999999999 999999999999999999999999999987754
Q ss_pred CCCc-ceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCccccccCCCcchhhhhhhh
Q 047901 665 NSSN-WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFLSLFSSSSSSINIEFNAM 742 (786)
Q Consensus 665 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~ 742 (786)
.... .....+|+.|+|| |...+..++.++||||+|+++|||++ |+.||+.... ......+
T Consensus 157 ~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~~ 218 (268)
T 3sxs_A 157 DQYVSSVGTKFPVKWSAP----------EVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN--------SEVVLKV 218 (268)
T ss_dssp TCEEECCSCCCCGGGCCH----------HHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCH--------HHHHHHH
T ss_pred hhhhcccCCCcCcccCCH----------HHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccCh--------HHHHHHH
Confidence 4321 2234567789999 78888889999999999999999999 9999874321 1122222
Q ss_pred ccCC-CCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 743 LDHR-LPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 743 ~~~~-~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
.... ...+... +..+.+++..||+.||++|||+.|+++.|
T Consensus 219 ~~~~~~~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~ll~~L 259 (268)
T 3sxs_A 219 SQGHRLYRPHLA----SDTIYQIMYSCWHELPEKRPTFQQLLSSI 259 (268)
T ss_dssp HTTCCCCCCTTS----CHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred HcCCCCCCCCcC----hHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 2222 2222222 23488999999999999999999999864
No 78
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-40 Score=361.98 Aligned_cols=252 Identities=19% Similarity=0.246 Sum_probs=208.1
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|++.+.||+|+||+||+|... +++.||+|++... .......+.+|+++++.++||||+++++++.+.+..++
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~----~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 125 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTP----YPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVL 125 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC----SHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEeccc----chhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEE
Confidence 357999999999999999999865 6889999998652 23345678899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCC--CCcEEEecccccee
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDL--EYEARVSDFGTAKL 661 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~--~~~~kl~Dfg~a~~ 661 (786)
||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+|+.
T Consensus 126 v~E~~~gg~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~ 200 (387)
T 1kob_A 126 ILEFLSGGELFDRIAAE--DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATK 200 (387)
T ss_dssp EEECCCCCBHHHHTTCT--TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEE
T ss_pred EEEcCCCCcHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEeccccee
Confidence 99999999999999753 34689999999999999999999999 9999999999999974 47899999999998
Q ss_pred cCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhh
Q 047901 662 LKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNA 741 (786)
Q Consensus 662 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 741 (786)
..... ......||+.|+|| |+..+..++.++|||||||++|||++|+.||..... ......
T Consensus 201 ~~~~~-~~~~~~gt~~y~aP----------E~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~--------~~~~~~ 261 (387)
T 1kob_A 201 LNPDE-IVKVTTATAEFAAP----------EIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD--------LETLQN 261 (387)
T ss_dssp CCTTS-CEEEECSSGGGCCH----------HHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--------HHHHHH
T ss_pred cCCCc-ceeeeccCCCccCc----------hhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH--------HHHHHH
Confidence 76432 33456899999999 788888899999999999999999999999874321 222233
Q ss_pred hccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 742 MLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
+.......+.......+..+.+++..||..||++|||+.|+++
T Consensus 262 i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 262 VKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp HHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 3333322222222233446899999999999999999999986
No 79
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=6.8e-41 Score=347.31 Aligned_cols=250 Identities=24% Similarity=0.414 Sum_probs=206.8
Q ss_pred hccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeEE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVV 584 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 584 (786)
.++|+..+.||+|+||+||+|+..+++.||+|++... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-----AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 83 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTT-----SBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEeccc-----ccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEE
Confidence 4579999999999999999999888899999999752 12346789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecCC
Q 047901 585 YEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKP 664 (786)
Q Consensus 585 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 664 (786)
|||+++|+|.+++... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 84 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 158 (269)
T 4hcu_A 84 FEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 158 (269)
T ss_dssp EECCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred EEeCCCCcHHHHHHhc--CcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccc
Confidence 9999999999999754 35689999999999999999999999 999999999999999999999999999986643
Q ss_pred CCC-cceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCccccccCCCcchhhhhhhh
Q 047901 665 NSS-NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFLSLFSSSSSSINIEFNAM 742 (786)
Q Consensus 665 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~ 742 (786)
... ......+|+.|+|| |......+++++||||+|+++|||++ |+.||.... .......+
T Consensus 159 ~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~--------~~~~~~~~ 220 (269)
T 4hcu_A 159 DQYTSSTGTKFPVKWASP----------EVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS--------NSEVVEDI 220 (269)
T ss_dssp HHHHSTTSTTCCGGGCCH----------HHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--------HHHHHHHH
T ss_pred cccccccCcccccccCCH----------HHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCC--------HHHHHHHH
Confidence 211 12234567889999 78888889999999999999999999 999987432 11222222
Q ss_pred ccC-CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 743 LDH-RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 743 ~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
... +...+... +..+.+++..||+.||++|||+.|+++.|
T Consensus 221 ~~~~~~~~~~~~----~~~~~~li~~~l~~~p~~Rps~~~ll~~l 261 (269)
T 4hcu_A 221 STGFRLYKPRLA----STHVYQIMNHCWRERPEDRPAFSRLLRQL 261 (269)
T ss_dssp HTTCCCCCCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred hcCccCCCCCcC----CHHHHHHHHHHccCCcccCcCHHHHHHHH
Confidence 222 22222222 23488999999999999999999999864
No 80
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=8.3e-41 Score=362.78 Aligned_cols=252 Identities=24% Similarity=0.435 Sum_probs=194.6
Q ss_pred hccCccceeeccccCceEEEEEcC----CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCe
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP----SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRH 580 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~ 580 (786)
..+|+..+.||+|+||+||+|+.. ++..||||++... ......+.|.+|+.++++++||||+++++++...+.
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 120 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG---YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 120 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTT---CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCc---cCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCc
Confidence 357999999999999999999864 5678999999753 233456789999999999999999999999999999
Q ss_pred eeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccce
Q 047901 581 SFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAK 660 (786)
Q Consensus 581 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~ 660 (786)
.++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 121 ~~lv~e~~~~~sL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 195 (373)
T 2qol_A 121 VMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGR 195 (373)
T ss_dssp CEEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC----
T ss_pred eEEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCcccc
Confidence 99999999999999999764 35689999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCCc---ceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCccccccCCCcchh
Q 047901 661 LLKPNSSN---WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFLSLFSSSSSSIN 736 (786)
Q Consensus 661 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~ 736 (786)
........ .....++..|+|| |...+..++.++|||||||++|||++ |+.||..... .
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~--------~ 257 (373)
T 2qol_A 196 VLEDDPEAAYTTRGGKIPIRWTSP----------EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN--------Q 257 (373)
T ss_dssp ------------------CTTSCH----------HHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH--------H
T ss_pred ccccCCccceeccCCCcCCCccCh----------hhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH--------H
Confidence 77543221 1122457789999 88888899999999999999999998 9999864321 1
Q ss_pred hhhhhhccC-CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 737 IEFNAMLDH-RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 737 ~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
.....+... +.+.+.. .+..+.+++..||+.||++|||+.+|++.|
T Consensus 258 ~~~~~i~~~~~~~~~~~----~~~~l~~li~~cl~~dp~~RPs~~~i~~~L 304 (373)
T 2qol_A 258 DVIKAVDEGYRLPPPMD----CPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304 (373)
T ss_dssp HHHHHHHTTEECCCCTT----CBHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCcc----ccHHHHHHHHHHhCcChhhCcCHHHHHHHH
Confidence 111222111 1222222 234588999999999999999999998864
No 81
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-40 Score=353.19 Aligned_cols=248 Identities=23% Similarity=0.344 Sum_probs=208.3
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|++.+.||+|+||+||+|+.. +++.||+|++..... ......+.+.+|+.+++.++||||+++++++.+.+..|+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 83 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIV-VRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFM 83 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEE
Confidence 357999999999999999999865 789999999864210 111235678899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecC
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK 663 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 663 (786)
||||+++|+|.+++... +.+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 84 v~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~ 157 (318)
T 1fot_A 84 IMDYIEGGELFSLLRKS---QRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVP 157 (318)
T ss_dssp EECCCCSCBHHHHHHHT---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred EEeCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecC
Confidence 99999999999999864 5689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhhc
Q 047901 664 PNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAML 743 (786)
Q Consensus 664 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 743 (786)
.. ....+||+.|+|| |+..+..++.++||||+||++|||++|+.||.... .......+.
T Consensus 158 ~~---~~~~~gt~~y~aP----------E~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--------~~~~~~~i~ 216 (318)
T 1fot_A 158 DV---TYTLCGTPDYIAP----------EVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN--------TMKTYEKIL 216 (318)
T ss_dssp SC---BCCCCSCTTTCCH----------HHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHH
T ss_pred Cc---cccccCCccccCH----------hHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC--------HHHHHHHHH
Confidence 32 2346899999999 78888889999999999999999999999986432 223344444
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 047901 744 DHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRP-----TMQTVCQ 784 (786)
Q Consensus 744 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RP-----t~~ev~~ 784 (786)
......|.... ..+.+++.+||..||++|| +++|+++
T Consensus 217 ~~~~~~p~~~~----~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 217 NAELRFPPFFN----EDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp HCCCCCCTTSC----HHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred hCCCCCCCCCC----HHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 55554444332 3488999999999999999 8888874
No 82
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=3.8e-41 Score=358.64 Aligned_cols=262 Identities=23% Similarity=0.320 Sum_probs=201.9
Q ss_pred hccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCC----e
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVR----H 580 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~----~ 580 (786)
.++|+..+.||+|+||+||+|+.. ++.||||++.. .......+..|+.++++++||||+++++++.... .
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~-----~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 96 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPI-----QDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVD 96 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECG-----GGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeec-----CchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCce
Confidence 468999999999999999999875 78999999864 2233445667888999999999999999997644 4
Q ss_pred eeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC-------CCCeEEcCCCCCceeeCCCCcEEE
Q 047901 581 SFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDC-------FPPIVHRDISSNNVLLDLEYEARV 653 (786)
Q Consensus 581 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~-------~~~ivHrdlk~~Nill~~~~~~kl 653 (786)
.++||||+++|+|.+++... .+++..+..++.|++.||+|||+.. .++|+||||||+||+++.++.+||
T Consensus 97 ~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL 172 (322)
T 3soc_A 97 LWLITAFHEKGSLSDFLKAN----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACI 172 (322)
T ss_dssp EEEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEE
T ss_pred EEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEE
Confidence 69999999999999999753 4899999999999999999999861 238999999999999999999999
Q ss_pred eccccceecCCCCCc--ceeeccCccccCCCCCCCCchHHHHhhh-----cCcCcccchHHHHHHHHHHHhCCCCCCccc
Q 047901 654 SDFGTAKLLKPNSSN--WTELVGTFGYVAPAHGNIGLHLAELAYT-----MKITEKCDVYSFGVLALEVIKGKHPGDFLS 726 (786)
Q Consensus 654 ~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~e~~~~-----~~~~~~sDvwslGvil~elltg~~Pf~~~~ 726 (786)
+|||+|+........ .....||+.|+|| |...+ ..++.++|||||||++|||+||+.||....
T Consensus 173 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~ 242 (322)
T 3soc_A 173 ADFGLALKFEAGKSAGDTHGQVGTRRYMAP----------EVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPV 242 (322)
T ss_dssp CCCTTCEEECTTSCCCCCTTCCCCGGGCCH----------HHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCC
T ss_pred ccCCcccccccccCccccccCccCccccCH----------hhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCc
Confidence 999999877643322 2335799999999 55554 356678999999999999999999987533
Q ss_pred cccCCC-------cchhhhhhhhc-cCCCC--CCCh-hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 727 LFSSSS-------SSINIEFNAML-DHRLP--HPSL-DVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 727 ~~~~~~-------~~~~~~~~~~~-~~~~~--~~~~-~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
...... ........... ..... .+.. .....+..+.+++.+||+.||++|||+.||++.|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L 313 (322)
T 3soc_A 243 DEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERI 313 (322)
T ss_dssp CCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred chhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 211000 00111111111 11111 1111 1123455699999999999999999999999864
No 83
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=4.5e-40 Score=384.56 Aligned_cols=395 Identities=21% Similarity=0.175 Sum_probs=327.4
Q ss_pred CeEEEEcCCCCCcccCCcCccCCCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeC
Q 047901 2 RVNSINLTSTGLKGTLQEFSFSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDL 81 (786)
Q Consensus 2 ~~~~l~l~~~~l~~~l~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 81 (786)
+++.|+|++|.+. .+++.+|.++++|++|+|++|+|+++.+..|.++++|++|+|++|+|+++.+..|+.+++|++|+|
T Consensus 77 ~L~~L~Ls~N~i~-~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~L 155 (635)
T 4g8a_A 77 ELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 155 (635)
T ss_dssp TCCEEECTTCCCC-EECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred CCCEEECCCCcCC-CcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeecc
Confidence 5889999999998 688889999999999999999999999999999999999999999999888889999999999999
Q ss_pred CCccCcccC--CCCCCCCCCcEEEccCCcCcccCchhhcccCCcc----eeccccccccccCChhhhc------------
Q 047901 82 SLNQFSGTF--PPICNLSNLKYISLHNNKLSGSIPEEIGNLMKLS----YLMLDTNQFTGQLPRNICR------------ 143 (786)
Q Consensus 82 s~N~l~~~~--~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~----~L~L~~N~l~~~~~~~~~~------------ 143 (786)
++|++++.. ..+..+++|++|+|++|+|+++.+..|..+.+++ .++++.|.++...+..+..
T Consensus 156 s~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~ 235 (635)
T 4g8a_A 156 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNF 235 (635)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCC
T ss_pred ccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhccc
Confidence 999998653 3478899999999999999999999988777655 5677777776433332211
Q ss_pred ------------cCc---------------------------------------------------------cceeeccc
Q 047901 144 ------------SGL---------------------------------------------------------LEILTVND 154 (786)
Q Consensus 144 ------------~~~---------------------------------------------------------L~~L~l~~ 154 (786)
+.. ++.+.+.+
T Consensus 236 ~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~ 315 (635)
T 4g8a_A 236 DSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVS 315 (635)
T ss_dssp SSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEES
T ss_pred ccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccc
Confidence 111 11111111
Q ss_pred ccccCCCCCcCCCCCCcEEEccCcccccccCc-------------------ccCCCCCCCEEeccCCcccc--ccCcCcc
Q 047901 155 NHFLGSIPNLRNCRSLVRAHLGRNNLTGNISE-------------------DFGIYPNLKFLDLSHNNFYG--EISSNWG 213 (786)
Q Consensus 155 N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~-------------------~f~~l~~L~~L~L~~N~i~~--~~~~~~~ 213 (786)
|.+... ..+....+|+.|++.+|.+..+... .+..+++|+.|++++|.+.. ..+..+.
T Consensus 316 ~~~~~~-~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~ 394 (635)
T 4g8a_A 316 VTIERV-KDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDF 394 (635)
T ss_dssp CEEEEC-GGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHH
T ss_pred cccccc-cccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhccccccccccccchh
Confidence 111111 1233345566666666665544332 23457899999999999864 3455667
Q ss_pred CCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCC-CCcccccccccccccccccCCCCccccccCCcCce
Q 047901 214 KCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIP-MELGRLISLNKLILRGNQLSGHLPRALGLLTELEY 292 (786)
Q Consensus 214 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 292 (786)
.+.+|+.|+++.|.+.. .+..+..+++|+.++++.|......+ ..|..+.+++.+++++|.+....+..+..+++|+.
T Consensus 395 ~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~ 473 (635)
T 4g8a_A 395 GTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEV 473 (635)
T ss_dssp SCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCE
T ss_pred hhhhhhhhhcccccccc-ccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhh
Confidence 88999999999999984 56678899999999999998776554 56899999999999999999999999999999999
Q ss_pred eccccccc-cccchhhhhcccCCcEEEecccccCCCcchHHhhhcCcCeeeccCCccCCCCCcccccccccceecccccc
Q 047901 293 FDLSSNRL-NNSILEALGFMFKLFYLNFSHNQFSQEIPEDLALLAHLSELDLSHNLFKGSIPSRICNLESLEKLNLSHNN 371 (786)
Q Consensus 293 L~L~~N~l-~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 371 (786)
|++++|.+ ..+.++.|..+++|++|+|++|+|+++.|..|.++++|++|+|++|+|++..|..|.++++|+.|+|++|+
T Consensus 474 L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~ 553 (635)
T 4g8a_A 474 LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNH 553 (635)
T ss_dssp EECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSC
T ss_pred hhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCc
Confidence 99999984 55678899999999999999999999999999999999999999999998889999999999999999999
Q ss_pred ccccCCcccccC-CCceEEeccCCccccc
Q 047901 372 ISGQIPACFIGM-SGLLSIDISYNELRGP 399 (786)
Q Consensus 372 l~~~~p~~~~~l-~~L~~L~l~~N~l~~~ 399 (786)
|++..|..|..+ ++|+.|++++|++.+.
T Consensus 554 l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 554 IMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp CCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred CCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 999999999998 6899999999999864
No 84
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.4e-40 Score=357.26 Aligned_cols=247 Identities=21% Similarity=0.252 Sum_probs=208.5
Q ss_pred ccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeEE
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVV 584 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 584 (786)
++|+..+.||+|+||.||+|+.. +++.||||++..... ......+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHh-ccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 57999999999999999999865 789999999854110 1123456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecCC
Q 047901 585 YEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKP 664 (786)
Q Consensus 585 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 664 (786)
|||+++|+|.+++... +.+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 120 ~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp EECCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EcCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccC
Confidence 9999999999999864 4689999999999999999999999 999999999999999999999999999987754
Q ss_pred CCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhhcc
Q 047901 665 NSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAMLD 744 (786)
Q Consensus 665 ~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 744 (786)
. ....+||+.|+|| |+..+..++.++|||||||++|||++|+.||.... .......+..
T Consensus 194 ~---~~~~~gt~~y~aP----------E~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--------~~~~~~~i~~ 252 (350)
T 1rdq_E 194 R---TWTLCGTPEALAP----------EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ--------PIQIYEKIVS 252 (350)
T ss_dssp C---BCCCEECGGGCCH----------HHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHH
T ss_pred C---cccccCCccccCH----------HHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC--------HHHHHHHHHc
Confidence 3 2346899999999 78888889999999999999999999999987422 2333444445
Q ss_pred CCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHH
Q 047901 745 HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPT-----MQTVCQ 784 (786)
Q Consensus 745 ~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt-----~~ev~~ 784 (786)
.....|.... ..+.+++.+||+.||++||+ ++|+++
T Consensus 253 ~~~~~p~~~~----~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 253 GKVRFPSHFS----SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp CCCCCCTTCC----HHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred CCCCCCCCCC----HHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 5555444332 34889999999999999998 888864
No 85
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.6e-40 Score=360.26 Aligned_cols=248 Identities=22% Similarity=0.290 Sum_probs=201.6
Q ss_pred ccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeEEEec
Q 047901 509 DAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEY 587 (786)
Q Consensus 509 ~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 587 (786)
...+.||+|+||.||+|+.. +++.||+|++.. ......+.+.+|++++++++||||+++++++...+..++||||
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~----~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~ 167 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKT----RGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEY 167 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEEC----CSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcc----cccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeC
Confidence 34678999999999999854 789999999975 2234567899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceee--CCCCcEEEeccccceecCCC
Q 047901 588 INRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLL--DLEYEARVSDFGTAKLLKPN 665 (786)
Q Consensus 588 ~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill--~~~~~~kl~Dfg~a~~~~~~ 665 (786)
+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 168 ~~~~~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~ 242 (373)
T 2x4f_A 168 VDGGELFDRIIDE--SYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR 242 (373)
T ss_dssp CTTCEEHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTT
T ss_pred CCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCc
Confidence 9999999998753 34689999999999999999999999 99999999999999 66789999999999987643
Q ss_pred CCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhhccC
Q 047901 666 SSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAMLDH 745 (786)
Q Consensus 666 ~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 745 (786)
. ......||+.|+|| |+.....++.++|||||||++|||++|+.||.... .......+...
T Consensus 243 ~-~~~~~~gt~~y~aP----------E~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~--------~~~~~~~i~~~ 303 (373)
T 2x4f_A 243 E-KLKVNFGTPEFLAP----------EVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN--------DAETLNNILAC 303 (373)
T ss_dssp C-BCCCCCSSCTTCCH----------HHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHHT
T ss_pred c-ccccccCCCcEeCh----------hhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhc
Confidence 3 23345799999999 77778889999999999999999999999987432 22333444444
Q ss_pred CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 746 RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 746 ~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
....+.......+..+.+++..||+.||++|||+.|+++
T Consensus 304 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 304 RWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp CCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred cCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 444333333334456899999999999999999999986
No 86
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.5e-41 Score=359.41 Aligned_cols=249 Identities=21% Similarity=0.300 Sum_probs=200.7
Q ss_pred hccCccceeeccccCceEEEEEc-CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|.+.+.||+|+||+||+|+. .+++.||||++..... ........+.+|+++++.++||||+++++++...+..++
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 86 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLL-KKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVM 86 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHc-cchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 35799999999999999999986 5789999999854110 011223578899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecC
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK 663 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 663 (786)
||||+ +|+|.+++... +.+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 87 v~E~~-~g~l~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~ 159 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVEK---KRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMT 159 (336)
T ss_dssp EECCC-CEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTT
T ss_pred EEECC-CCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceecc
Confidence 99999 67999998754 5689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCcceeeccCccccCCCCCCCCchHHHHhhhcCc-CcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhh
Q 047901 664 PNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKI-TEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAM 742 (786)
Q Consensus 664 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~-~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 742 (786)
.. ......+||+.|+|| |...+..+ ++++||||+||++|+|++|+.||+..... .....+
T Consensus 160 ~~-~~~~~~~gt~~y~aP----------E~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~--------~~~~~i 220 (336)
T 3h4j_B 160 DG-NFLKTSCGSPNYAAP----------EVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP--------NLFKKV 220 (336)
T ss_dssp TS-BTTCCCTTSTTTSCG----------GGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSST--------TCBCCC
T ss_pred CC-cccccccCCcCcCCH----------HHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHH--------HHHHHH
Confidence 43 233456899999999 45545454 68999999999999999999998753211 111111
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 743 LDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.......|... +..+.+++.+||..||.+|||++|+++
T Consensus 221 ~~~~~~~p~~~----s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 221 NSCVYVMPDFL----SPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp CSSCCCCCTTS----CHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred HcCCCCCcccC----CHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 12222223222 234889999999999999999999975
No 87
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=9.8e-41 Score=351.64 Aligned_cols=253 Identities=22% Similarity=0.297 Sum_probs=196.8
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCc----------------------hhhHHHHHHHHHHHh
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQ----------------------MSDQKEFLNEIKALT 561 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~----------------------~~~~~~~~~e~~~l~ 561 (786)
.++|++.+.||+|+||+||+|+.. +++.||||++........ ....+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 357999999999999999999854 688999999875321110 112356889999999
Q ss_pred hcCCCcccceeeEEec--CCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCC
Q 047901 562 KIRHRNIVKFYGFCSH--VRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDIS 639 (786)
Q Consensus 562 ~l~hpniv~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk 639 (786)
.++||||+++++++.+ .+..++||||+++|+|.+++. ...+++..+..++.|++.||+|||+. +|+|||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlk 164 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT----LKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIK 164 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC----SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCC
Confidence 9999999999999976 568899999999999988653 35789999999999999999999999 99999999
Q ss_pred CCceeeCCCCcEEEeccccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcC---cCcccchHHHHHHHHHHH
Q 047901 640 SNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMK---ITEKCDVYSFGVLALEVI 716 (786)
Q Consensus 640 ~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~---~~~~sDvwslGvil~ell 716 (786)
|+||+++.++.+||+|||+++.............||+.|+||| ...+.. ++.++|||||||++|||+
T Consensus 165 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE----------~~~~~~~~~~~~~~Di~slG~~l~~l~ 234 (298)
T 2zv2_A 165 PSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPE----------SLSETRKIFSGKALDVWAMGVTLYCFV 234 (298)
T ss_dssp GGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGG----------GCCTTCCCEESHHHHHHHHHHHHHHHH
T ss_pred HHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChh----------hhccCCCCCCCchhhhHhHHHHHHHHH
Confidence 9999999999999999999998765544445568999999995 443333 477899999999999999
Q ss_pred hCCCCCCccccccCCCcchhhhhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 717 KGKHPGDFLSLFSSSSSSINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 717 tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
+|+.||..... ......+.......+.. ...+..+.+++.+||+.||++|||+.|+++
T Consensus 235 ~g~~pf~~~~~--------~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 235 FGQCPFMDERI--------MCLHSKIKSQALEFPDQ--PDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HSSCSSCCSSH--------HHHHHHHHHCCCCCCSS--SCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HCCCCCCCccH--------HHHHHHHhcccCCCCCc--cccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 99999874321 11122222222222210 112235889999999999999999999975
No 88
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=8.9e-41 Score=358.79 Aligned_cols=252 Identities=21% Similarity=0.292 Sum_probs=209.1
Q ss_pred HhccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhc-CCCcccceeeEEecCCee
Q 047901 504 RTKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHS 581 (786)
Q Consensus 504 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~ 581 (786)
..++|+..+.||+|+||+||+|+.+ +++.||||++..... ......+.+..|..++..+ +||+|+++++++.+.+..
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~-~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~ 96 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVV-IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 96 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHH-HHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-hcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEE
Confidence 3568999999999999999999876 578899999864210 0123356788999999988 799999999999999999
Q ss_pred eEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEecccccee
Q 047901 582 FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKL 661 (786)
Q Consensus 582 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~ 661 (786)
|+||||+++|+|.+++... +.+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+.
T Consensus 97 ~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~ 170 (353)
T 2i0e_A 97 YFVMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 170 (353)
T ss_dssp EEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccc
Confidence 9999999999999999864 4689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhh
Q 047901 662 LKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNA 741 (786)
Q Consensus 662 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 741 (786)
...........+||+.|+|| |+..+..++.++|||||||++|||++|+.||.... .......
T Consensus 171 ~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~--------~~~~~~~ 232 (353)
T 2i0e_A 171 NIWDGVTTKTFCGTPDYIAP----------EIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED--------EDELFQS 232 (353)
T ss_dssp CCCTTCCBCCCCSCGGGCCH----------HHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHH
T ss_pred cccCCcccccccCCccccCh----------hhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC--------HHHHHHH
Confidence 54444444567899999999 78888889999999999999999999999987422 2334444
Q ss_pred hccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHH
Q 047901 742 MLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPT-----MQTVCQ 784 (786)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt-----~~ev~~ 784 (786)
+.......|... +..+.+++..||.+||++||+ ++|+++
T Consensus 233 i~~~~~~~p~~~----s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 233 IMEHNVAYPKSM----SKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp HHHCCCCCCTTS----CHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred HHhCCCCCCCCC----CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 555555544432 335889999999999999995 467654
No 89
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1e-40 Score=357.40 Aligned_cols=251 Identities=23% Similarity=0.290 Sum_probs=205.3
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhc-CCCcccceeeEEecCCeee
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSF 582 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~ 582 (786)
.++|++.+.||+|+||+||+|+.+ +++.||||++..... ...+|++++.++ +||||+++++++.+.+..|
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~ 92 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR--------DPTEEIEILLRYGQHPNIITLKDVYDDGKYVY 92 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC--------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEE
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC--------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEE
Confidence 567999999999999999999865 688999999975321 234688888888 7999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCC----CcEEEecccc
Q 047901 583 VVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLE----YEARVSDFGT 658 (786)
Q Consensus 583 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~----~~~kl~Dfg~ 658 (786)
+||||+++|+|.+++... +.+++..+..++.|++.||+|||+. +|+||||||+||++..+ +.+||+|||+
T Consensus 93 lv~E~~~gg~L~~~i~~~---~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~ 166 (342)
T 2qr7_A 93 VVTELMKGGELLDKILRQ---KFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGF 166 (342)
T ss_dssp EEECCCCSCBHHHHHHTC---TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTT
T ss_pred EEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCC
Confidence 999999999999999754 5689999999999999999999999 99999999999998543 3599999999
Q ss_pred ceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhh
Q 047901 659 AKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIE 738 (786)
Q Consensus 659 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~ 738 (786)
++............+||+.|+|| |+..+..++.++||||+||++|||++|+.||.... .....+.
T Consensus 167 a~~~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-----~~~~~~~ 231 (342)
T 2qr7_A 167 AKQLRAENGLLMTPCYTANFVAP----------EVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGP-----DDTPEEI 231 (342)
T ss_dssp CEECBCTTCCBCCSSCCSSCCCH----------HHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSST-----TSCHHHH
T ss_pred cccCcCCCCceeccCCCccccCH----------HHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCC-----cCCHHHH
Confidence 99876554445567899999999 77777778999999999999999999999987421 1122233
Q ss_pred hhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 739 FNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
...+.......+...+...+..+.+++..||..||++|||+.|+++
T Consensus 232 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 232 LARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp HHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 3344444444333223334456889999999999999999999875
No 90
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.8e-40 Score=353.32 Aligned_cols=252 Identities=24% Similarity=0.335 Sum_probs=202.0
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|++.+.||+|+||+||+|+.. +++.||||++..... ....+.+.+|+.+++.++||||+++++++.+.+..|+
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 82 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA---VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC----------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc---cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 357999999999999999999865 789999999865321 2234568899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecC
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK 663 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 663 (786)
||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 83 v~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 156 (323)
T 3tki_A 83 FLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (323)
T ss_dssp EEECCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred EEEcCCCCcHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceec
Confidence 99999999999999743 5689999999999999999999999 99999999999999999999999999998764
Q ss_pred CCC--CcceeeccCccccCCCCCCCCchHHHHhhhcCc-CcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhh
Q 047901 664 PNS--SNWTELVGTFGYVAPAHGNIGLHLAELAYTMKI-TEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFN 740 (786)
Q Consensus 664 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~-~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~ 740 (786)
... .......||+.|+|| |...+..+ +.++||||+||++|||++|+.||..... ......
T Consensus 157 ~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~~ 219 (323)
T 3tki_A 157 YNNRERLLNKMCGTLPYVAP----------ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD-------SCQEYS 219 (323)
T ss_dssp ETTEECCBCSCCSCGGGSCH----------HHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCT-------TSHHHH
T ss_pred cCCcccccCCCccCcCccCc----------HHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCch-------HHHHHH
Confidence 322 223456899999999 77766665 7789999999999999999999874321 111122
Q ss_pred hhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 741 AMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.........+. .......+.+++.+||..||++|||++|+++
T Consensus 220 ~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 220 DWKEKKTYLNP--WKKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp HHHTTCTTSTT--GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHhcccccCCc--cccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 22222221111 1223345789999999999999999999975
No 91
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=357.82 Aligned_cols=250 Identities=23% Similarity=0.332 Sum_probs=191.7
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|++.+.||+|+||+||+|+.. +++.||||++... ...+.+.+|++++++++||||+++++++...+..++
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 125 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT------VDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISL 125 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------------CHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccc------hhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEE
Confidence 457999999999999999999876 5789999999752 133567899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCC---CCcEEEeccccce
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDL---EYEARVSDFGTAK 660 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~---~~~~kl~Dfg~a~ 660 (786)
||||+++|+|.+++... +.+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||+++
T Consensus 126 v~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~ 199 (349)
T 2w4o_A 126 VLELVTGGELFDRIVEK---GYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSK 199 (349)
T ss_dssp EECCCCSCBHHHHHTTC---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC---
T ss_pred EEEeCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCcccc
Confidence 99999999999999754 5689999999999999999999999 9999999999999975 8999999999998
Q ss_pred ecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhh
Q 047901 661 LLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFN 740 (786)
Q Consensus 661 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~ 740 (786)
..... .......||+.|+|| |...+..++.++|||||||++|||++|+.||.... .......
T Consensus 200 ~~~~~-~~~~~~~gt~~y~aP----------E~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-------~~~~~~~ 261 (349)
T 2w4o_A 200 IVEHQ-VLMKTVCGTPGYCAP----------EILRGCAYGPEVDMWSVGIITYILLCGFEPFYDER-------GDQFMFR 261 (349)
T ss_dssp --------------CGGGSCH----------HHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTT-------CHHHHHH
T ss_pred ccCcc-cccccccCCCCccCH----------HHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCc-------ccHHHHH
Confidence 76533 223446799999999 78888889999999999999999999999986422 1122233
Q ss_pred hhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 741 AMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.+.......+.......+..+.+++.+||..||++|||+.|+++
T Consensus 262 ~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 262 RILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp HHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 33333333222222233456889999999999999999999986
No 92
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=1.9e-40 Score=359.32 Aligned_cols=256 Identities=22% Similarity=0.306 Sum_probs=205.3
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|++.+.||+|+||.||+|+.. +++.||+|++..... ......+.+.+|+++++.++||||+++++++.+.+..|+
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~-~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 92 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKC-VERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFM 92 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhc-ccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 357999999999999999999865 688999999854110 112335678899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecC
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK 663 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 663 (786)
||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+|+...
T Consensus 93 v~e~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 166 (384)
T 4fr4_A 93 VVDLLLGGDLRYHLQQN---VHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLP 166 (384)
T ss_dssp EECCCTTEEHHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeecc
Confidence 99999999999999854 5689999999999999999999999 99999999999999999999999999998775
Q ss_pred CCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhhc
Q 047901 664 PNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAML 743 (786)
Q Consensus 664 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 743 (786)
.. ......+||+.|+|||++.. ..+..++.++|||||||++|||++|+.||..... .........+.
T Consensus 167 ~~-~~~~~~~gt~~Y~aPE~~~~-------~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~-----~~~~~~~~~~~ 233 (384)
T 4fr4_A 167 RE-TQITTMAGTKPYMAPEMFSS-------RKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSS-----TSSKEIVHTFE 233 (384)
T ss_dssp TT-CCBCCCCSCGGGCCGGGTCC-------CSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTT-----SCHHHHHHHHH
T ss_pred CC-CceeccCCCccccCCeeecc-------CCCCCCCccceeechHHHHHHHHhCCCCCCCCCC-----ccHHHHHHHHh
Confidence 43 33455689999999953321 0134588999999999999999999999864221 11222233333
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCC-HHHHHH
Q 047901 744 DHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPT-MQTVCQ 784 (786)
Q Consensus 744 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt-~~ev~~ 784 (786)
......|.... ..+.+++..||..||++||+ ++++.+
T Consensus 234 ~~~~~~p~~~s----~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 234 TTVVTYPSAWS----QEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp HCCCCCCTTSC----HHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred hcccCCCCcCC----HHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 33344443322 34889999999999999998 777754
No 93
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=9.4e-41 Score=349.90 Aligned_cols=261 Identities=22% Similarity=0.313 Sum_probs=198.5
Q ss_pred ccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeEEE
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVY 585 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 585 (786)
++|+..+.||+|+||+||+|+..+++.||||++.... ......+.+.+|+++++.++||||+++++++...+..++||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEK--EDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVF 79 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSS--GGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccc--cccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEE
Confidence 4789999999999999999998889999999997532 12223467889999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecCCC
Q 047901 586 EYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPN 665 (786)
Q Consensus 586 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 665 (786)
||+++ +|.+++... .+.+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 80 e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 153 (288)
T 1ob3_A 80 EHLDQ-DLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIP 153 (288)
T ss_dssp ECCSE-EHHHHHHTS--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred EecCC-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCcc
Confidence 99986 999998754 35689999999999999999999999 9999999999999999999999999999877544
Q ss_pred CCcceeeccCccccCCCCCCCCchHHHHhhh-cCcCcccchHHHHHHHHHHHhCCCCCCccccccCC----------Ccc
Q 047901 666 SSNWTELVGTFGYVAPAHGNIGLHLAELAYT-MKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSS----------SSS 734 (786)
Q Consensus 666 ~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~-~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~----------~~~ 734 (786)
........||+.|+|| |...+ ..++.++||||+||++|||++|+.||......... ...
T Consensus 154 ~~~~~~~~~t~~y~aP----------E~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 223 (288)
T 1ob3_A 154 VRKYTHEIVTLWYRAP----------DVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSK 223 (288)
T ss_dssp --------CCCTTCCH----------HHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred ccccccccccccccCc----------hheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChh
Confidence 4444556789999999 66654 45899999999999999999999998753311000 000
Q ss_pred hhhhhhh--hccCCCC--CC---ChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 735 INIEFNA--MLDHRLP--HP---SLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 735 ~~~~~~~--~~~~~~~--~~---~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
....... ..+.... .+ .......+..+.+++.+||+.||++|||++|+++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 224 NWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp TSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000000 0000000 00 0000112345889999999999999999999986
No 94
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=7.7e-41 Score=351.92 Aligned_cols=259 Identities=25% Similarity=0.402 Sum_probs=201.1
Q ss_pred hccCccceeeccccCceEEEEEc-----CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEec--
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKL-----PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSH-- 577 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~-- 577 (786)
.++|++.+.||+|+||+||+|++ .+++.||||++.. ......+.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 84 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH----STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 84 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESC----CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHH
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEccc----CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 45799999999999999999983 3678999999875 234556789999999999999999999999854
Q ss_pred CCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccc
Q 047901 578 VRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFG 657 (786)
Q Consensus 578 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg 657 (786)
....++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 85 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg 159 (295)
T 3ugc_A 85 RRNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFG 159 (295)
T ss_dssp HTSCEEEEECCTTCBHHHHHHHC--GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCC
T ss_pred CCceEEEEEeCCCCCHHHHHHhc--ccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCc
Confidence 35689999999999999999764 34589999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCc---ceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccc-----c
Q 047901 658 TAKLLKPNSSN---WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLF-----S 729 (786)
Q Consensus 658 ~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~-----~ 729 (786)
+++........ .....++..|+|| |...+..++.++||||||+++|||+||..||...... .
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~ 229 (295)
T 3ugc_A 160 LTKVLPQDKEFFKVKEPGESPIFWYAP----------ESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 229 (295)
T ss_dssp SCC-------------CTTCGGGGCCH----------HHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHC
T ss_pred ccccccCCcceeeeccCCCCccceeCc----------HHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhc
Confidence 99877543221 2234577789999 8888889999999999999999999999997643210 0
Q ss_pred C--CCcchhhhhhhhcc--CCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 730 S--SSSSINIEFNAMLD--HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 730 ~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
. ............+. .+.+.+.. .+..+.+++..||+.||++|||+.|+++.|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~el~~~L 286 (295)
T 3ugc_A 230 NDKQGQMIVFHLIELLKNNGRLPRPDG----CPDEIYMIMTECWNNNVNQRPSFRDLALRV 286 (295)
T ss_dssp TTCCTHHHHHHHHHHHHTTCCCCCCTT----CCHHHHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred CccccchhHHHHHHHHhccCcCCCCcC----cCHHHHHHHHHHcCCChhhCCCHHHHHHHH
Confidence 0 00000001111111 12222322 234589999999999999999999999864
No 95
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=2.5e-40 Score=343.44 Aligned_cols=253 Identities=26% Similarity=0.408 Sum_probs=193.5
Q ss_pred hccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeEE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVV 584 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 584 (786)
.++|+..+.||+|+||+||+|++. ++.||||++............+.+.+|+++++.++||||+++++++...+..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 357999999999999999999975 8899999987643333334467899999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCC--------CCcEEEecc
Q 047901 585 YEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDL--------EYEARVSDF 656 (786)
Q Consensus 585 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~--------~~~~kl~Df 656 (786)
|||+++++|.+++.. ..+++..+..++.|++.|++|||+....+|+||||||+||+++. ++.+||+||
T Consensus 85 ~e~~~~~~L~~~~~~----~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 85 MEFARGGPLNRVLSG----KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp EECCTTEEHHHHHTS----SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred EEcCCCCCHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 999999999999853 46899999999999999999999992222999999999999986 678999999
Q ss_pred ccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchh
Q 047901 657 GTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSIN 736 (786)
Q Consensus 657 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~ 736 (786)
|.++...... .....||+.|+|| |...+..+++++||||||+++|||++|+.||..... .
T Consensus 161 g~~~~~~~~~--~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--------~ 220 (271)
T 3dtc_A 161 GLAREWHRTT--KMSAAGAYAWMAP----------EVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDG--------L 220 (271)
T ss_dssp CC---------------CCGGGSCH----------HHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCH--------H
T ss_pred Cccccccccc--ccCCCCccceeCH----------HHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------H
Confidence 9998765432 2245799999999 788888899999999999999999999999875321 1
Q ss_pred hhhhhhccCC--CCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 737 IEFNAMLDHR--LPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 737 ~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
.......... ...+.. .+..+.+++.+||+.||++|||+.|+++.|
T Consensus 221 ~~~~~~~~~~~~~~~~~~----~~~~~~~li~~~l~~~p~~Rps~~e~l~~L 268 (271)
T 3dtc_A 221 AVAYGVAMNKLALPIPST----CPEPFAKLMEDCWNPDPHSRPSFTNILDQL 268 (271)
T ss_dssp HHHHHHHTSCCCCCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHhhhcCCCCCCCCcc----cCHHHHHHHHHHhcCCcccCcCHHHHHHHH
Confidence 1112222222 222222 233588999999999999999999999864
No 96
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=3.7e-40 Score=348.31 Aligned_cols=254 Identities=23% Similarity=0.383 Sum_probs=198.1
Q ss_pred hccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeEE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVV 584 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 584 (786)
.++|.+.+.||+|+||+||+|+.. ..+|+|+++... ......+.+.+|++++++++||||+++++++.. +..++|
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv 109 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVD--PTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIV 109 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSS--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCC--CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEE
Confidence 457999999999999999999874 468999887532 234456789999999999999999999998754 568899
Q ss_pred EeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecCC
Q 047901 585 YEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKP 664 (786)
Q Consensus 585 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 664 (786)
|||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|+....
T Consensus 110 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~ 184 (307)
T 3lb7_A 110 TQWCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp EECCSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC---
T ss_pred EecCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceeccc
Confidence 9999999999999754 45789999999999999999999999 999999999999999999999999999986543
Q ss_pred C--CCcceeeccCccccCCCCCCCCchHHHHhh---hcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhh
Q 047901 665 N--SSNWTELVGTFGYVAPAHGNIGLHLAELAY---TMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEF 739 (786)
Q Consensus 665 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~---~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~ 739 (786)
. ........||+.|+|| |... ...++.++|||||||++|||++|+.||..... ....
T Consensus 185 ~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~--------~~~~ 246 (307)
T 3lb7_A 185 WSGSQQVEQPTGSVLWMAP----------EVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN--------RDQI 246 (307)
T ss_dssp ---------CCCCTTSCCH----------HHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC--------HHHH
T ss_pred ccccccccCCCCCcceECc----------ceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCc--------HHHH
Confidence 2 2223445799999999 6665 56688999999999999999999999874321 1111
Q ss_pred hhhccCCCCCC--ChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 740 NAMLDHRLPHP--SLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 740 ~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
..++......+ ......++..+.+++..||+.+|++|||+.|+++.|
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l 295 (307)
T 3lb7_A 247 IFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSI 295 (307)
T ss_dssp HHHHHHTCCCCCSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHH
T ss_pred HHHHhcCCCCcchhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHH
Confidence 11111111111 111112234589999999999999999999998763
No 97
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=4.7e-40 Score=350.22 Aligned_cols=255 Identities=18% Similarity=0.258 Sum_probs=210.4
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCc--hhhHHHHHHHHHHHhhcCCCcccceeeEEecCCee
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQ--MSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHS 581 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~--~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~ 581 (786)
.++|++.+.||+|+||+||+|+.. +++.||||++........ ....+.+.+|+.+++.++||||+++++++...+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 456999999999999999999865 688999999876432221 12467899999999999999999999999999999
Q ss_pred eEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCC----cEEEeccc
Q 047901 582 FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEY----EARVSDFG 657 (786)
Q Consensus 582 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~----~~kl~Dfg 657 (786)
++||||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg 164 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC---SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred EEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCc
Confidence 9999999999999999753 5689999999999999999999999 999999999999999887 79999999
Q ss_pred cceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhh
Q 047901 658 TAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINI 737 (786)
Q Consensus 658 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~ 737 (786)
+++...... ......||+.|+|| |...+..++.++||||||+++|||++|+.||.... ...
T Consensus 165 ~~~~~~~~~-~~~~~~gt~~y~aP----------E~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~~~ 225 (321)
T 2a2a_A 165 LAHEIEDGV-EFKNIFGTPEFVAP----------EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--------KQE 225 (321)
T ss_dssp TCEECCTTC-CCCCCCSCGGGCCH----------HHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS--------HHH
T ss_pred cceecCccc-cccccCCCCCccCc----------ccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCC--------HHH
Confidence 998776432 23445799999999 77888889999999999999999999999986422 122
Q ss_pred hhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 738 EFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
....+.......+.......+..+.+++..||..||++|||++|+++
T Consensus 226 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 226 TLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp HHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred HHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 23333333333332222233456899999999999999999999986
No 98
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-40 Score=356.21 Aligned_cols=255 Identities=21% Similarity=0.380 Sum_probs=207.9
Q ss_pred HhccCccceeeccccCceEEEEEcC------CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEec
Q 047901 504 RTKDFDAKYCIGKGEHRSVYRAKLP------SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSH 577 (786)
Q Consensus 504 ~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~ 577 (786)
..++|+..+.||+|+||.||+|+.. +++.||||++... ......+.+.+|+++++.++||||+++++++..
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE---ASADMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTT---CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccc---cCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 3578999999999999999999864 3478999999752 233456789999999999999999999999999
Q ss_pred CCeeeEEEeccCCCCHHHHhhcCCC---------------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEc
Q 047901 578 VRHSFVVYEYINRGSLATVLSNNFA---------------------SEDFDWRKRMNVITGVADALSYMHHDCFPPIVHR 636 (786)
Q Consensus 578 ~~~~~lv~e~~~~g~L~~~l~~~~~---------------------~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHr 636 (786)
.+..++||||+++|+|.+++..... ...+++..++.++.|++.||.|||+. +|+||
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~ 198 (343)
T 1luf_A 122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHR 198 (343)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecC
Confidence 9999999999999999999976421 25689999999999999999999999 99999
Q ss_pred CCCCCceeeCCCCcEEEeccccceecCCCCC--cceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHH
Q 047901 637 DISSNNVLLDLEYEARVSDFGTAKLLKPNSS--NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALE 714 (786)
Q Consensus 637 dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~e 714 (786)
||||+||+++.++.+||+|||+++....... ......+|+.|+|| |...+..++.++||||||+++||
T Consensus 199 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aP----------E~~~~~~~~~~~Di~slG~il~e 268 (343)
T 1luf_A 199 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPP----------ESIFYNRYTTESDVWAYGVVLWE 268 (343)
T ss_dssp CCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCH----------HHHHHCCCCHHHHHHHHHHHHHH
T ss_pred CCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecCh----------hhhccCCcCcccccHHHHHHHHH
Confidence 9999999999999999999999987643221 22345688999999 78888889999999999999999
Q ss_pred HHh-CCCCCCccccccCCCcchhhhhhhhccCCCC-CCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 715 VIK-GKHPGDFLSLFSSSSSSINIEFNAMLDHRLP-HPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 715 llt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
|++ |..||.... .......+.+.... .+.. .+..+.+++..||+.||++|||+.++++.|
T Consensus 269 l~t~g~~p~~~~~--------~~~~~~~~~~~~~~~~~~~----~~~~l~~li~~~l~~~p~~Rps~~~~~~~L 330 (343)
T 1luf_A 269 IFSYGLQPYYGMA--------HEEVIYYVRDGNILACPEN----CPLELYNLMRLCWSKLPADRPSFCSIHRIL 330 (343)
T ss_dssp HHTTTCCTTTTSC--------HHHHHHHHHTTCCCCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHhcCCCcCCCCC--------hHHHHHHHhCCCcCCCCCC----CCHHHHHHHHHHcccCcccCCCHHHHHHHH
Confidence 999 999986432 12222233333322 2222 223588999999999999999999998864
No 99
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=4e-40 Score=343.11 Aligned_cols=250 Identities=22% Similarity=0.307 Sum_probs=208.6
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|++.+.||+|+||+||+|+.. ++..||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF----VEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYL 83 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG----CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhc----cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEE
Confidence 457999999999999999999865 57789999986522 2345688999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceee---CCCCcEEEeccccce
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLL---DLEYEARVSDFGTAK 660 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill---~~~~~~kl~Dfg~a~ 660 (786)
||||+++++|.+++... ..+++..+..++.|++.|+.|||+. +|+||||||+||++ +.++.+||+|||.+.
T Consensus 84 v~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~ 157 (277)
T 3f3z_A 84 VMELCTGGELFERVVHK---RVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA 157 (277)
T ss_dssp EEECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEeccCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccce
Confidence 99999999999998764 4689999999999999999999999 99999999999999 788999999999998
Q ss_pred ecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhh
Q 047901 661 LLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFN 740 (786)
Q Consensus 661 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~ 740 (786)
...... ......||+.|+|| |...+ .+++++||||+|+++|||++|+.||.... ......
T Consensus 158 ~~~~~~-~~~~~~~t~~y~aP----------E~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~--------~~~~~~ 217 (277)
T 3f3z_A 158 RFKPGK-MMRTKVGTPYYVSP----------QVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPT--------DSEVML 217 (277)
T ss_dssp ECCTTS-CBCCCCSCTTTCCH----------HHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHH
T ss_pred eccCcc-chhccCCCCCccCh----------HHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCC--------HHHHHH
Confidence 776432 33456799999999 66544 48999999999999999999999987432 223334
Q ss_pred hhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 741 AMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.+.......+.......+..+.+++..||+.||++|||+.|+++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 218 KIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp HHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 44444444443333334566899999999999999999999975
No 100
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.1e-40 Score=359.16 Aligned_cols=254 Identities=23% Similarity=0.338 Sum_probs=204.6
Q ss_pred hccCccceeeccccCceEEEEEcC------CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecC
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP------SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHV 578 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~ 578 (786)
.++|++.+.||+|+||+||+|++. +++.||||++... ........+.+|+.++++++||||+++++++...
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~ 146 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV---CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 146 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSS---CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccc---cChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 357999999999999999999843 4568999998642 2334556788999999999999999999999999
Q ss_pred CeeeEEEeccCCCCHHHHhhcCC----CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCC---cE
Q 047901 579 RHSFVVYEYINRGSLATVLSNNF----ASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEY---EA 651 (786)
Q Consensus 579 ~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~---~~ 651 (786)
...++||||+++|+|.+++.... ....+++..++.++.|++.||+|||++ +|+||||||+|||++.++ .+
T Consensus 147 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~ 223 (367)
T 3l9p_A 147 LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA 223 (367)
T ss_dssp SSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCE
T ss_pred CCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceE
Confidence 99999999999999999997642 224589999999999999999999999 999999999999999554 59
Q ss_pred EEeccccceecCCCC--CcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCccccc
Q 047901 652 RVSDFGTAKLLKPNS--SNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFLSLF 728 (786)
Q Consensus 652 kl~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~~~~ 728 (786)
||+|||+|+...... .......||+.|+|| |.+.+..++.++|||||||++|||++ |..||....
T Consensus 224 kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aP----------E~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~-- 291 (367)
T 3l9p_A 224 KIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP----------EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-- 291 (367)
T ss_dssp EECCCHHHHHHHHHSSCTTCCGGGSCGGGCCH----------HHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--
T ss_pred EECCCccccccccccccccCCCcCCcccEECH----------HHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC--
Confidence 999999998653221 122345789999999 88888899999999999999999998 999987432
Q ss_pred cCCCcchhhhhhhhccCC-CCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 729 SSSSSSINIEFNAMLDHR-LPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
.......+.... ...+.. .+..+.+++..||+.||++|||+.||++.|
T Consensus 292 ------~~~~~~~i~~~~~~~~~~~----~~~~l~~li~~~l~~dP~~Rps~~eil~~l 340 (367)
T 3l9p_A 292 ------NQEVLEFVTSGGRMDPPKN----CPGPVYRIMTQCWQHQPEDRPNFAIILERI 340 (367)
T ss_dssp ------HHHHHHHHHTTCCCCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred ------HHHHHHHHHcCCCCCCCcc----CCHHHHHHHHHHcCCCHhHCcCHHHHHHHH
Confidence 122222222222 222222 223588999999999999999999999864
No 101
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=8e-41 Score=357.67 Aligned_cols=254 Identities=16% Similarity=0.206 Sum_probs=204.5
Q ss_pred ccCccceeeccccCceEEEEEc-CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhc-CCCcccceeeEEecCCeeeE
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~l 583 (786)
++|++.+.||+|+||+||+|+. .+++.||||++..... .+.+.+|+++++.+ +||||+++++++...+..++
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l 82 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR------APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAM 82 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS------SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc------hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEE
Confidence 5799999999999999999985 5788999999865321 23577999999999 89999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCc-----EEEecccc
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYE-----ARVSDFGT 658 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~-----~kl~Dfg~ 658 (786)
||||+ +++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+
T Consensus 83 v~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~ 156 (330)
T 2izr_A 83 VLELL-GPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFAL 156 (330)
T ss_dssp EEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTT
T ss_pred EEEeC-CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEccc
Confidence 99999 89999999864 35799999999999999999999999 9999999999999998887 99999999
Q ss_pred ceecCCCCCc-------ceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCC
Q 047901 659 AKLLKPNSSN-------WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSS 731 (786)
Q Consensus 659 a~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~ 731 (786)
|+........ .....||+.|+|| |.+.+..++.++|||||||++|||++|+.||.....
T Consensus 157 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~---- 222 (330)
T 2izr_A 157 AKEYIDPETKKHIPYREHKSLTGTARYMSI----------NTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKA---- 222 (330)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCH----------HHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC----
T ss_pred ceeeecCCCCccccccccCCcCCCccccCh----------HHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccc----
Confidence 9976543321 2356899999999 888888899999999999999999999999875321
Q ss_pred CcchhhhhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 732 SSSINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
.........+...+...+........+.+.+++..||+.||.+|||+++|.+.|
T Consensus 223 -~~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~~l 276 (330)
T 2izr_A 223 -DTLKERYQKIGDTKRATPIEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRKLF 276 (330)
T ss_dssp -SSHHHHHHHHHHHHHHSCHHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHHHH
T ss_pred -ccHHHHHHHHHhhhccCCHHHHhccChHHHHHHHHHHhCCCCCCCCHHHHHHHH
Confidence 111222222222222212111111112689999999999999999999998753
No 102
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=3.5e-40 Score=346.37 Aligned_cols=254 Identities=19% Similarity=0.277 Sum_probs=201.0
Q ss_pred ccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeEE
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVV 584 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 584 (786)
++|+..+.||+|+||+||+|+.. +++.||||++.... ......+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 79 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD--DDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLV 79 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSC--SSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccC--CcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEE
Confidence 47999999999999999999865 68899999997533 2334457788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecCC
Q 047901 585 YEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKP 664 (786)
Q Consensus 585 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 664 (786)
|||+++ ++.+++... .+.+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 80 ~e~~~~-~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 153 (292)
T 3o0g_A 80 FEFCDQ-DLKKYFDSC--NGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGI 153 (292)
T ss_dssp EECCSE-EHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred EecCCC-CHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence 999986 666666543 35799999999999999999999999 999999999999999999999999999998765
Q ss_pred CCCcceeeccCccccCCCCCCCCchHHHHhhhcC-cCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhhc
Q 047901 665 NSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMK-ITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAML 743 (786)
Q Consensus 665 ~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~-~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 743 (786)
.........||+.|+|| |...+.. ++.++||||+||++|||++|..||..... .......+.
T Consensus 154 ~~~~~~~~~~t~~y~aP----------E~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~-------~~~~~~~i~ 216 (292)
T 3o0g_A 154 PVRCYSAEVVTLWYRPP----------DVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND-------VDDQLKRIF 216 (292)
T ss_dssp CCSCCCSCCSCGGGCCH----------HHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS-------HHHHHHHHH
T ss_pred ccccccCCccccCCcCh----------HHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCC-------HHHHHHHHH
Confidence 55555566899999999 6666555 79999999999999999998888532111 000011100
Q ss_pred c------------------CC-C------CCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 744 D------------------HR-L------PHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 744 ~------------------~~-~------~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
. .. . ..........+..+.+++..||+.||++|||++|+++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 217 RLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp HHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0 00 0 0000001122345889999999999999999999986
No 103
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.6e-40 Score=359.89 Aligned_cols=262 Identities=23% Similarity=0.368 Sum_probs=208.2
Q ss_pred HHHHHHHhccCccceeeccccCceEEEEEc------CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhc-CCCcccc
Q 047901 498 YEEIIRRTKDFDAKYCIGKGEHRSVYRAKL------PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVK 570 (786)
Q Consensus 498 ~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~ 570 (786)
...+....++|++.+.||+|+||.||+|++ .+++.||||++... ......+.+.+|+++++++ +||||++
T Consensus 14 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 14 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG---ATHSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT---CCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred cccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCc---CCHHHHHHHHHHHHHHHhhcCCcceee
Confidence 345555678899999999999999999973 34578999999752 2334557899999999999 7999999
Q ss_pred eeeEEecCC-eeeEEEeccCCCCHHHHhhcCCC-----------------------------------------------
Q 047901 571 FYGFCSHVR-HSFVVYEYINRGSLATVLSNNFA----------------------------------------------- 602 (786)
Q Consensus 571 l~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~----------------------------------------------- 602 (786)
+++++...+ ..++||||+++|+|.+++.....
T Consensus 91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 3vhe_A 91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 170 (359)
T ss_dssp EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence 999987754 48999999999999999976422
Q ss_pred ----------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecCCCC
Q 047901 603 ----------------SEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNS 666 (786)
Q Consensus 603 ----------------~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 666 (786)
...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 247 (359)
T 3vhe_A 171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 247 (359)
T ss_dssp -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence 11288999999999999999999999 99999999999999999999999999998765433
Q ss_pred C--cceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCccccccCCCcchhhhhhhhc
Q 047901 667 S--NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFLSLFSSSSSSINIEFNAML 743 (786)
Q Consensus 667 ~--~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~ 743 (786)
. ......||+.|+|| |...+..++.++|||||||++|||+| |+.||..... .......+.
T Consensus 248 ~~~~~~~~~~t~~y~aP----------E~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-------~~~~~~~~~ 310 (359)
T 3vhe_A 248 DYVRKGDARLPLKWMAP----------ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-------DEEFCRRLK 310 (359)
T ss_dssp TCEEC--CEECGGGCCH----------HHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC-------SHHHHHHHH
T ss_pred cchhccccCCCceeECh----------hhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccch-------hHHHHHHHH
Confidence 2 22345789999999 88888899999999999999999998 9999874321 111111111
Q ss_pred cC-CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 744 DH-RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 744 ~~-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
.. ....+... +..+.+++..||+.||++|||+.|+++.|
T Consensus 311 ~~~~~~~~~~~----~~~l~~li~~~l~~dP~~Rps~~ell~~L 350 (359)
T 3vhe_A 311 EGTRMRAPDYT----TPEMYQTMLDCWHGEPSQRPTFSELVEHL 350 (359)
T ss_dssp HTCCCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred cCCCCCCCCCC----CHHHHHHHHHHccCChhhCCCHHHHHHHH
Confidence 11 22222222 23488999999999999999999999864
No 104
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=2.8e-40 Score=351.19 Aligned_cols=263 Identities=19% Similarity=0.293 Sum_probs=189.5
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|+..+.||+|+||+||+|+.. +++.||||++.... .....+.+.+|+++++.++||||+++++++..++..++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 80 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS---EEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTL 80 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCS---TTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc---ccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEE
Confidence 457999999999999999999865 68899999997532 22234578899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCC---CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccce
Q 047901 584 VYEYINRGSLATVLSNNF---ASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAK 660 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~ 660 (786)
||||++ |+|.+++.... ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 81 v~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~ 156 (317)
T 2pmi_A 81 VFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLAR 156 (317)
T ss_dssp EEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCE
T ss_pred EEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccce
Confidence 999998 59999986431 234689999999999999999999999 99999999999999999999999999999
Q ss_pred ecCCCCCcceeeccCccccCCCCCCCCchHHHHhhh-cCcCcccchHHHHHHHHHHHhCCCCCCccccccCC--------
Q 047901 661 LLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYT-MKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSS-------- 731 (786)
Q Consensus 661 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~-~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~-------- 731 (786)
.............||+.|+|| |+..+ ..++.++|||||||++|||++|+.||.........
T Consensus 157 ~~~~~~~~~~~~~~t~~y~aP----------E~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~ 226 (317)
T 2pmi_A 157 AFGIPVNTFSSEVVTLWYRAP----------DVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMG 226 (317)
T ss_dssp ETTSCCCCCCCCCSCCTTCCH----------HHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC
T ss_pred ecCCCcccCCCCcccccccCc----------hHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence 876544444556899999999 66654 46899999999999999999999998753321000
Q ss_pred --Ccchhhhhhhhcc--CCCC-CCChhH---------HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 732 --SSSINIEFNAMLD--HRLP-HPSLDV---------QEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 732 --~~~~~~~~~~~~~--~~~~-~~~~~~---------~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
............. .... .+.... ...+..+.+++.+||+.||++|||++|+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 227 TPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp SCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 0000000000000 0000 000000 012245889999999999999999999975
No 105
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=3.4e-40 Score=344.76 Aligned_cols=250 Identities=23% Similarity=0.420 Sum_probs=203.6
Q ss_pred hccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeEE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVV 584 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 584 (786)
.++|+..+.||+|+||+||+|++.++..||||++... ....+++.+|+++++.++||||+++++++.+.+..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 97 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-----SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 97 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTT-----SBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCC-----CCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEE
Confidence 4679999999999999999999988889999999752 12346789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecCC
Q 047901 585 YEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKP 664 (786)
Q Consensus 585 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 664 (786)
|||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 98 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 172 (283)
T 3gen_A 98 TEYMANGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172 (283)
T ss_dssp ECCCTTCBHHHHHHCG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCC
T ss_pred EeccCCCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccccc
Confidence 9999999999999763 35689999999999999999999999 999999999999999999999999999986643
Q ss_pred CCC-cceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCccccccCCCcchhhhhhhh
Q 047901 665 NSS-NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFLSLFSSSSSSINIEFNAM 742 (786)
Q Consensus 665 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~ 742 (786)
... ......+|+.|+|| |...+..++.++||||+|+++|||+| |+.||..... ......+
T Consensus 173 ~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~--------~~~~~~~ 234 (283)
T 3gen_A 173 DEYTSSVGSKFPVRWSPP----------EVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN--------SETAEHI 234 (283)
T ss_dssp HHHHSTTSTTSCGGGCCH----------HHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCH--------HHHHHHH
T ss_pred cccccccCCccCcccCCH----------HHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccCh--------hHHHHHH
Confidence 211 12234567889999 78888889999999999999999998 9999874321 1122222
Q ss_pred ccCC-CCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 743 LDHR-LPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 743 ~~~~-~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
.... ...+... +..+.+++..||+.||++|||++|+++.|
T Consensus 235 ~~~~~~~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~ll~~L 275 (283)
T 3gen_A 235 AQGLRLYRPHLA----SEKVYTIMYSCWHEKADERPTFKILLSNI 275 (283)
T ss_dssp HTTCCCCCCTTC----CHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred hcccCCCCCCcC----CHHHHHHHHHHccCChhHCcCHHHHHHHH
Confidence 2221 1122222 23488999999999999999999999864
No 106
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.4e-40 Score=371.14 Aligned_cols=250 Identities=22% Similarity=0.418 Sum_probs=205.3
Q ss_pred hccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeEE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVV 584 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 584 (786)
.++|+..+.||+|+||+||+|+++++..||||++... ....+.|.+|+.+++.++||||+++++++. .+..++|
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv 260 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-----SMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYII 260 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTT-----SBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCC-----CccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEE
Confidence 5679999999999999999999988889999999752 134678999999999999999999999987 5678999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecCC
Q 047901 585 YEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKP 664 (786)
Q Consensus 585 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 664 (786)
|||+++|+|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+|+....
T Consensus 261 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~ 336 (454)
T 1qcf_A 261 TEFMAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIED 336 (454)
T ss_dssp ECCCTTCBHHHHHHSH-HHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCC
T ss_pred EeecCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCC
Confidence 9999999999999754 223578999999999999999999999 999999999999999999999999999987653
Q ss_pred CCC-cceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCccccccCCCcchhhhhhhh
Q 047901 665 NSS-NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFLSLFSSSSSSINIEFNAM 742 (786)
Q Consensus 665 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~ 742 (786)
... ......++..|+|| |......++.++|||||||++|||+| |+.||..... .+....+
T Consensus 337 ~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~--------~~~~~~i 398 (454)
T 1qcf_A 337 NEYTAREGAKFPIKWTAP----------EAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN--------PEVIRAL 398 (454)
T ss_dssp HHHHTTCSSSSCGGGSCH----------HHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--------HHHHHHH
T ss_pred CceeccCCCcccccccCH----------HHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH--------HHHHHHH
Confidence 211 11233567899999 78888899999999999999999999 9999875321 1111222
Q ss_pred cc-CCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 743 LD-HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 743 ~~-~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
.. .+.+.|... +..+.++|..||+.||++|||+++|++.|
T Consensus 399 ~~~~~~~~~~~~----~~~l~~li~~cl~~dp~~RPt~~~i~~~L 439 (454)
T 1qcf_A 399 ERGYRMPRPENC----PEELYNIMMRCWKNRPEERPTFEYIQSVL 439 (454)
T ss_dssp HHTCCCCCCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HcCCCCCCCCCC----CHHHHHHHHHHccCChhHCcCHHHHHHHH
Confidence 11 223333322 34589999999999999999999998764
No 107
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.6e-40 Score=358.17 Aligned_cols=254 Identities=24% Similarity=0.397 Sum_probs=207.2
Q ss_pred hccCccceeeccccCceEEEEEcC--------CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhc-CCCcccceeeEE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP--------SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGFC 575 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~ 575 (786)
.++|.+.+.||+|+||+||+|+.. .+..||||++... ......+.+.+|+++++.+ +||||+++++++
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~ 144 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD---ATEKDLSDLISEMEMMKMIGKHKNIINLLGAC 144 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT---CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc---cCHHHHHHHHHHHHHHHHhcCCchhhhheeee
Confidence 457999999999999999999842 2357999999753 2344567899999999999 899999999999
Q ss_pred ecCCeeeEEEeccCCCCHHHHhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCc
Q 047901 576 SHVRHSFVVYEYINRGSLATVLSNNFA-------------SEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNN 642 (786)
Q Consensus 576 ~~~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~N 642 (786)
...+..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||+|
T Consensus 145 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~N 221 (382)
T 3tt0_A 145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARN 221 (382)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGG
T ss_pred ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcce
Confidence 999999999999999999999986532 24589999999999999999999999 99999999999
Q ss_pred eeeCCCCcEEEeccccceecCCCCC--cceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CC
Q 047901 643 VLLDLEYEARVSDFGTAKLLKPNSS--NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GK 719 (786)
Q Consensus 643 ill~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~ 719 (786)
|+++.++.+||+|||+|+....... ......+|+.|+|| |...+..++.++|||||||++|||++ |.
T Consensus 222 Ill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aP----------E~~~~~~~~~~~DiwslG~il~ellt~g~ 291 (382)
T 3tt0_A 222 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP----------EALFDRIYTHQSDVWSFGVLLWEIFTLGG 291 (382)
T ss_dssp EEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCH----------HHHHSCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred EEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCH----------HHhcCCCCCchhHHHHHHHHHHHHHhCCC
Confidence 9999999999999999987654322 22334678899999 78888889999999999999999999 99
Q ss_pred CCCCccccccCCCcchhhhhhhhccC-CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 720 HPGDFLSLFSSSSSSINIEFNAMLDH-RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 720 ~Pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
.||.... .......+... +...+... +..+.+++..||+.||++|||++||++.|
T Consensus 292 ~p~~~~~--------~~~~~~~~~~~~~~~~~~~~----~~~l~~li~~~l~~dP~~Rps~~ell~~L 347 (382)
T 3tt0_A 292 SPYPGVP--------VEELFKLLKEGHRMDKPSNC----TNELYMMMRDCWHAVPSQRPTFKQLVEDL 347 (382)
T ss_dssp CSSTTCC--------HHHHHHHHHTTCCCCCCSSC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCCCC--------HHHHHHHHHcCCCCCCCccC----CHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 9986432 11222222222 12222222 23588999999999999999999999864
No 108
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=5.5e-40 Score=341.67 Aligned_cols=248 Identities=23% Similarity=0.335 Sum_probs=183.4
Q ss_pred ccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeEE
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVV 584 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 584 (786)
++|++.+.||+|+||+||+|+.. +++.||+|++..... ......+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVL-AKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhc-chHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 57999999999999999999854 789999999976332 2233456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecCC
Q 047901 585 YEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKP 664 (786)
Q Consensus 585 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 664 (786)
|||+ ++++.+++... ..+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 92 ~e~~-~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 164 (275)
T 2eue_A 92 IEYA-GNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp EECC-CEEHHHHHHTS---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-----
T ss_pred ehhc-CCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccC
Confidence 9999 67888888754 5689999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCcceeeccCccccCCCCCCCCchHHHHhhhcCc-CcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhhc
Q 047901 665 NSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKI-TEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAML 743 (786)
Q Consensus 665 ~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~-~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 743 (786)
.. ......||+.|+|| |...+..+ ++++||||+|+++|||++|+.||.... .......+.
T Consensus 165 ~~-~~~~~~~t~~y~aP----------E~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~~~~~~~~~ 225 (275)
T 2eue_A 165 GN-FLKTSCGSPNYAAP----------EVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES--------IPVLFKNIS 225 (275)
T ss_dssp -----------CTTCCH----------HHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHH
T ss_pred cc-cccCCCCCcCcCCc----------eeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHH
Confidence 32 23445799999999 66665554 689999999999999999999987432 122233333
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 744 DHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 744 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
......+.... ..+.+++.+||+.||++|||++|+++
T Consensus 226 ~~~~~~~~~~~----~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 226 NGVYTLPKFLS----PGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp HTCCCCCTTSC----HHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hCCCCCCccCC----HHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 33444343322 34889999999999999999999975
No 109
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=6.6e-40 Score=342.77 Aligned_cols=253 Identities=21% Similarity=0.323 Sum_probs=208.3
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|++.+.||+|+||+||+|... +++.||+|++.... ......+.+.+|++++++++||||+++++++...+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 82 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK--LSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 82 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG--CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeeccc--CCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEE
Confidence 467999999999999999999865 68899999986532 123445678899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCc---EEEeccccce
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYE---ARVSDFGTAK 660 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~---~kl~Dfg~a~ 660 (786)
||||+++|+|.+++... ..+++..+..++.|++.|+.|||+. +|+||||||+||+++.++. +||+|||.+.
T Consensus 83 v~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~ 156 (284)
T 3kk8_A 83 VFDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156 (284)
T ss_dssp EECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeE
Confidence 99999999999998764 5689999999999999999999999 9999999999999986655 9999999998
Q ss_pred ecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhh
Q 047901 661 LLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFN 740 (786)
Q Consensus 661 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~ 740 (786)
...... ......||+.|+|| |...+..++.++||||+|+++|+|++|+.||.... ......
T Consensus 157 ~~~~~~-~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~--------~~~~~~ 217 (284)
T 3kk8_A 157 EVNDSE-AWHGFAGTPGYLSP----------EVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED--------QHRLYA 217 (284)
T ss_dssp ECCSSC-BCCCSCSCGGGCCH----------HHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHH
T ss_pred EcccCc-cccCCCCCcCCcCc----------hhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCc--------hhHHHH
Confidence 775432 23446799999999 78888889999999999999999999999986432 122223
Q ss_pred hhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 741 AMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.+.......+.......+..+.+++..||+.||++|||++|+++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 218 QIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp HHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 33333333232222233445889999999999999999999976
No 110
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=3.9e-40 Score=366.50 Aligned_cols=249 Identities=25% Similarity=0.374 Sum_probs=207.5
Q ss_pred ccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeEE
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVV 584 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 584 (786)
++|.+.+.||+|+||+||+|+.. +|+.||||++..... ........+.+|+++++.++||||+++++++...+..++|
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKI-RSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHH-HHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhc-cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 57999999999999999999865 789999999864110 1112356788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecCC
Q 047901 585 YEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKP 664 (786)
Q Consensus 585 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 664 (786)
|||+++|+|.+++... +.+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 95 ~E~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 95 MEYVSGGELFDYICKN---GRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168 (476)
T ss_dssp EECCSSEEHHHHTTSS---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred EeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence 9999999999999753 5699999999999999999999999 999999999999999999999999999988754
Q ss_pred CCCcceeeccCccccCCCCCCCCchHHHHhhhcCc-CcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhhc
Q 047901 665 NSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKI-TEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAML 743 (786)
Q Consensus 665 ~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~-~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 743 (786)
. ......+||+.|+|| |+..+..+ ++++||||+||++|||++|+.||+... .......+.
T Consensus 169 ~-~~~~~~~gt~~y~aP----------E~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~--------~~~~~~~i~ 229 (476)
T 2y94_A 169 G-EFLRTSCGSPNYAAP----------EVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH--------VPTLFKKIC 229 (476)
T ss_dssp T-CCBCCCCSCSTTCCH----------HHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS--------SHHHHHHHH
T ss_pred c-ccccccCCCcCeECh----------hhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC--------HHHHHHHHh
Confidence 3 233456899999999 77766655 689999999999999999999987432 122333444
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 744 DHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 744 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
+.....|.... ..+.+++..||..||++|||++|+++
T Consensus 230 ~~~~~~p~~~s----~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 230 DGIFYTPQYLN----PSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp TTCCCCCTTCC----HHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cCCcCCCccCC----HHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 44444443322 34889999999999999999999985
No 111
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=9.2e-40 Score=343.53 Aligned_cols=251 Identities=20% Similarity=0.321 Sum_probs=210.3
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|...+.||+|+||+||+|+.. +++.||+|++..... ......+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLL-LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 92 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-CSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhc-cCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEE
Confidence 457999999999999999999865 578899999865322 223456788999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecC
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK 663 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 663 (786)
||||+++++|.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++...
T Consensus 93 v~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 166 (294)
T 2rku_A 93 VLELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 166 (294)
T ss_dssp EEECCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecc
Confidence 99999999999998754 4689999999999999999999999 99999999999999999999999999998876
Q ss_pred CCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhhc
Q 047901 664 PNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAML 743 (786)
Q Consensus 664 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 743 (786)
..........||+.|+|| |...+..++.++||||+|+++|||++|+.||.... .......+.
T Consensus 167 ~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--------~~~~~~~~~ 228 (294)
T 2rku_A 167 YDGERKKVLCGTPNYIAP----------EVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC--------LKETYLRIK 228 (294)
T ss_dssp STTCCBCCCCSCCSSCCH----------HHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHH
T ss_pred cCccccccccCCCCcCCc----------chhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHh
Confidence 544444556799999999 77778889999999999999999999999987432 122233333
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 744 DHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 744 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
......+.... ..+.+++..||+.||++|||++|+++
T Consensus 229 ~~~~~~~~~~~----~~~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 229 KNEYSIPKHIN----PVAASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp TTCCCCCTTSC----HHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred hccCCCccccC----HHHHHHHHHHcccChhhCcCHHHHhh
Confidence 33333333222 34889999999999999999999986
No 112
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.3e-40 Score=360.10 Aligned_cols=247 Identities=23% Similarity=0.256 Sum_probs=197.6
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHH-HhhcCCCcccceeeEEecCCeee
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKA-LTKIRHRNIVKFYGFCSHVRHSF 582 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~-l~~l~hpniv~l~~~~~~~~~~~ 582 (786)
.++|+..+.||+|+||+||+|+.+ +++.||||++...... .......+..|..+ ++.++||||+++++++.+.+..|
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~-~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~ 115 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAIL-KKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY 115 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC--------------CCBCCCCCTTBCCEEEEEECSSEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhh-hhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE
Confidence 357999999999999999999865 6788999998753211 12234456677776 56789999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceec
Q 047901 583 VVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLL 662 (786)
Q Consensus 583 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~ 662 (786)
+||||+++|+|.+++... +.+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 116 lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~ 189 (373)
T 2r5t_A 116 FVLDYINGGELFYHLQRE---RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKEN 189 (373)
T ss_dssp EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGG
T ss_pred EEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCcccccc
Confidence 999999999999999764 4688999999999999999999999 9999999999999999999999999999875
Q ss_pred CCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhh
Q 047901 663 KPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAM 742 (786)
Q Consensus 663 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 742 (786)
..........+||+.|+|| |++.+..++.++|||||||++|||++|+.||.... .......+
T Consensus 190 ~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~--------~~~~~~~i 251 (373)
T 2r5t_A 190 IEHNSTTSTFCGTPEYLAP----------EVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN--------TAEMYDNI 251 (373)
T ss_dssp BCCCCCCCSBSCCCCCCCH----------HHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSB--------HHHHHHHH
T ss_pred ccCCCccccccCCccccCH----------HHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC--------HHHHHHHH
Confidence 4444445567899999999 78888889999999999999999999999987432 23334444
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHH
Q 047901 743 LDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQ 780 (786)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ 780 (786)
.......+.... ..+.+++..||++||++||++.
T Consensus 252 ~~~~~~~~~~~~----~~~~~li~~lL~~dp~~R~~~~ 285 (373)
T 2r5t_A 252 LNKPLQLKPNIT----NSARHLLEGLLQKDRTKRLGAK 285 (373)
T ss_dssp HHSCCCCCSSSC----HHHHHHHHHHTCSSGGGSTTTT
T ss_pred HhcccCCCCCCC----HHHHHHHHHHcccCHHhCCCCC
Confidence 554444443322 3488999999999999999984
No 113
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=3.6e-40 Score=371.24 Aligned_cols=250 Identities=24% Similarity=0.419 Sum_probs=207.0
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
..+|+..+.||+|+||.||+|+++ ++..||||++... ....+.|.+|++++++++||||++++++|...+..++
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 293 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 293 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSS-----SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCc-----ccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEE
Confidence 457899999999999999999876 4789999998642 2245789999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecC
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK 663 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 663 (786)
||||+++|+|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 294 v~E~~~~g~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 294 ITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369 (495)
T ss_dssp EEECCTTCBHHHHHHHS-CTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCT
T ss_pred EEEccCCCCHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceecc
Confidence 99999999999999865 345689999999999999999999999 99999999999999999999999999998775
Q ss_pred CCCCc-ceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCccccccCCCcchhhhhhh
Q 047901 664 PNSSN-WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFLSLFSSSSSSINIEFNA 741 (786)
Q Consensus 664 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~ 741 (786)
..... .....++..|+|| |.+....++.++|||||||++|||+| |..||..... .....
T Consensus 370 ~~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~---------~~~~~ 430 (495)
T 1opk_A 370 GDTYTAHAGAKFPIKWTAP----------ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---------SQVYE 430 (495)
T ss_dssp TCCEECCTTCCCCGGGCCH----------HHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG---------GGHHH
T ss_pred CCceeecCCCcCCcceeCH----------hHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCH---------HHHHH
Confidence 43221 1233567899999 78888889999999999999999999 9999875331 11112
Q ss_pred hccC--CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 742 MLDH--RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 742 ~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
.+.. +...+... +..+.++|..||+.||++|||+.+|++.|
T Consensus 431 ~~~~~~~~~~~~~~----~~~l~~li~~cl~~dP~~RPs~~el~~~L 473 (495)
T 1opk_A 431 LLEKDYRMERPEGC----PEKVYELMRACWQWNPSDRPSFAEIHQAF 473 (495)
T ss_dssp HHHTTCCCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHcCCCCCCCCCC----CHHHHHHHHHHcCcChhHCcCHHHHHHHH
Confidence 2222 22233322 33588999999999999999999998864
No 114
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=3e-40 Score=344.28 Aligned_cols=252 Identities=24% Similarity=0.398 Sum_probs=185.3
Q ss_pred hccCccceeeccccCceEEEEEc-CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|++.+.||+|+||+||+|+. .+++.||||++..... ......+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAM-YKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhh-hhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 45799999999999999999986 4789999999854110 111234678899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecC
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK 663 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 663 (786)
||||+++++|.+++... ...+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||.+....
T Consensus 89 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 163 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNR--VKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLK 163 (278)
T ss_dssp EEECCTTEEHHHHHHTC--SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEecCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence 99999999999999754 35689999999999999999999999 99999999999999999999999999998876
Q ss_pred CCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhhc
Q 047901 664 PNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAML 743 (786)
Q Consensus 664 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 743 (786)
..........||+.|+|| |...+..++.++||||||+++|||++|+.||...... .......
T Consensus 164 ~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~ 225 (278)
T 3cok_A 164 MPHEKHYTLCGTPNYISP----------EIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVK--------NTLNKVV 225 (278)
T ss_dssp --------------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------------CC
T ss_pred CCCCcceeccCCCCcCCc----------chhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHH--------HHHHHHh
Confidence 443333456799999999 5555667889999999999999999999998753321 1111122
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 744 DHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 744 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
......+... +..+.+++.+||+.||++|||++++++
T Consensus 226 ~~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 226 LADYEMPSFL----SIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp SSCCCCCTTS----CHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hcccCCcccc----CHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 2222223222 234889999999999999999999976
No 115
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=5.9e-40 Score=365.41 Aligned_cols=246 Identities=27% Similarity=0.409 Sum_probs=201.8
Q ss_pred hccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCC-eeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVR-HSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~-~~~l 583 (786)
.++|+..+.||+|+||.||+|.+. ++.||||+++.. ...+.|.+|++++++++||||+++++++...+ ..++
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~i 264 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND------ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 264 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSC------TTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCc------hHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEE
Confidence 467899999999999999999985 779999999752 13467999999999999999999999987654 7899
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecC
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK 663 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 663 (786)
||||+++|+|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 265 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 340 (450)
T 1k9a_A 265 VTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 340 (450)
T ss_dssp EEECCTTCBHHHHHHHH-CTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEecCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccc
Confidence 99999999999999865 233478999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCccccccCCCcchhhhhhhh
Q 047901 664 PNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFLSLFSSSSSSINIEFNAM 742 (786)
Q Consensus 664 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~ 742 (786)
.. .....++..|+|| |...+..++.++|||||||++|||+| |+.||..... ......+
T Consensus 341 ~~---~~~~~~~~~y~aP----------E~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~--------~~~~~~i 399 (450)
T 1k9a_A 341 ST---QDTGKLPVKWTAP----------EALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--------KDVVPRV 399 (450)
T ss_dssp ---------CCCTTTSCH----------HHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCT--------TTHHHHH
T ss_pred cc---ccCCCCCcceeCH----------HHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHH
Confidence 32 1233678899999 88888899999999999999999998 9999875432 1111122
Q ss_pred cc-CCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 743 LD-HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 743 ~~-~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
.. .+...|... +..+.++|..||+.||++|||+.++++.|
T Consensus 400 ~~~~~~~~p~~~----~~~l~~li~~cl~~dp~~Rpt~~~l~~~L 440 (450)
T 1k9a_A 400 EKGYKMDAPDGC----PPAVYDVMKNCWHLDAATRPTFLQLREQL 440 (450)
T ss_dssp HTTCCCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HcCCCCCCCCcC----CHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 12 123333322 34589999999999999999999998764
No 116
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=9.1e-40 Score=347.02 Aligned_cols=254 Identities=24% Similarity=0.398 Sum_probs=206.9
Q ss_pred hccCccceeeccccCceEEEEEc------CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecC
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKL------PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHV 578 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~ 578 (786)
.++|.+.+.||+|+||.||+|+. .+++.||||++... ......+.+.+|+++++.++||||+++++++...
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 98 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN---ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD 98 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTT---CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCC---CCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecC
Confidence 46799999999999999999975 24578999999752 2345567899999999999999999999999999
Q ss_pred CeeeEEEeccCCCCHHHHhhcCCC---------------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcC
Q 047901 579 RHSFVVYEYINRGSLATVLSNNFA---------------------SEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRD 637 (786)
Q Consensus 579 ~~~~lv~e~~~~g~L~~~l~~~~~---------------------~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrd 637 (786)
+..++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+. +|+|||
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~d 175 (314)
T 2ivs_A 99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRD 175 (314)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCC
T ss_pred CceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccc
Confidence 999999999999999999986532 13489999999999999999999999 999999
Q ss_pred CCCCceeeCCCCcEEEeccccceecCCCCCc--ceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHH
Q 047901 638 ISSNNVLLDLEYEARVSDFGTAKLLKPNSSN--WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV 715 (786)
Q Consensus 638 lk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~el 715 (786)
|||+||+++.++.+||+|||+++........ .....+|+.|+|| |...+..++.++||||+||++|||
T Consensus 176 ikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~il~el 245 (314)
T 2ivs_A 176 LAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAI----------ESLFDHIYTTQSDVWSFGVLLWEI 245 (314)
T ss_dssp CSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCH----------HHHHHCEECHHHHHHHHHHHHHHH
T ss_pred cchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccCh----------hhhcCCCcCchhhHHHHHHHHHHH
Confidence 9999999999999999999999877543322 2234678899999 778888899999999999999999
Q ss_pred Hh-CCCCCCccccccCCCcchhhhhhhhccC-CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 716 IK-GKHPGDFLSLFSSSSSSINIEFNAMLDH-RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 716 lt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
++ |+.||..... ......+... ....+.. .+..+.+++.+||+.||++|||+.|+++.|
T Consensus 246 ~t~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~l~~~l 306 (314)
T 2ivs_A 246 VTLGGNPYPGIPP--------ERLFNLLKTGHRMERPDN----CSEEMYRLMLQCWKQEPDKRPVFADISKDL 306 (314)
T ss_dssp HTTSCCSSTTCCG--------GGHHHHHHTTCCCCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HhCCCCCCCCCCH--------HHHHHHhhcCCcCCCCcc----CCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 99 9999874321 1111111111 1122222 234588999999999999999999998764
No 117
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.4e-40 Score=370.55 Aligned_cols=251 Identities=22% Similarity=0.260 Sum_probs=199.4
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|+..+.||+|+||.||+|+.. +++.||||++..... ........+.+|+.+++.++||||+++++++...+..++
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVI-VAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-C-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhh-hhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence 467999999999999999999854 789999999864211 112234567889999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEEcCCCCCceeeCCCCcEEEeccccceec
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHH-DCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLL 662 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~-~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~ 662 (786)
||||+++|+|.+++... ..+++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||+|+..
T Consensus 226 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 226 VMEYANGGELFFHLSRE---RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp EECCCSSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred EEeeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 99999999999999764 568999999999999999999998 7 9999999999999999999999999999875
Q ss_pred CCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhh
Q 047901 663 KPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAM 742 (786)
Q Consensus 663 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 742 (786)
..........+||+.|+|| |++.+..++.++|||||||++|||++|+.||.... .......+
T Consensus 300 ~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--------~~~~~~~i 361 (446)
T 4ejn_A 300 IKDGATMKTFCGTPEYLAP----------EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--------HEKLFELI 361 (446)
T ss_dssp CC-----CCSSSCGGGCCH----------HHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHH
T ss_pred cCCCcccccccCCccccCH----------hhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCC--------HHHHHHHH
Confidence 5444445567899999999 88888899999999999999999999999986432 22233333
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 047901 743 LDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRP-----TMQTVCQ 784 (786)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RP-----t~~ev~~ 784 (786)
.......|.... ..+.+++..||++||++|| |++|+++
T Consensus 362 ~~~~~~~p~~~~----~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 362 LMEEIRFPRTLG----PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp HHCCCCCCTTSC----HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred HhCCCCCCccCC----HHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 444444443322 3488999999999999999 9999975
No 118
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=8.3e-41 Score=354.36 Aligned_cols=255 Identities=22% Similarity=0.326 Sum_probs=197.4
Q ss_pred hccCccceeeccccCceEEEEEc-CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCe---
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRH--- 580 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~--- 580 (786)
.++|++.+.||+|+||+||+|+. .+++.||||++..... ........+.+|++++++++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 89 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLA-RDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP 89 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTT-TSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCcccc-CCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence 35799999999999999999985 5788999999976332 233456688999999999999999999999876543
Q ss_pred -eeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccc
Q 047901 581 -SFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTA 659 (786)
Q Consensus 581 -~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a 659 (786)
.|+||||+++|+|.+++... +.+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a 163 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIA 163 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred ccEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence 49999999999999999764 4689999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCC---cceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchh
Q 047901 660 KLLKPNSS---NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSIN 736 (786)
Q Consensus 660 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~ 736 (786)
+....... ......||+.|+|| |...+..++.++|||||||++|||++|+.||..... .
T Consensus 164 ~~~~~~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~--------~ 225 (311)
T 3ork_A 164 RAIADSGNSVTQTAAVIGTAQYLSP----------EQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP--------V 225 (311)
T ss_dssp ------------------CCTTCCH----------HHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--------H
T ss_pred ccccccccccccccccCcCcccCCH----------HHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh--------H
Confidence 87654322 22345799999999 788888899999999999999999999999874321 1
Q ss_pred hhhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 737 IEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.............+.......+..+.+++.+||+.||++||++.++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~ 273 (311)
T 3ork_A 226 SVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMR 273 (311)
T ss_dssp HHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred HHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHH
Confidence 112222222222111111123446889999999999999998877764
No 119
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=4.6e-40 Score=360.10 Aligned_cols=264 Identities=20% Similarity=0.281 Sum_probs=203.5
Q ss_pred hccCccceeeccc--cCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCee
Q 047901 505 TKDFDAKYCIGKG--EHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHS 581 (786)
Q Consensus 505 ~~~~~~~~~ig~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~ 581 (786)
.++|++.+.||+| +||+||+|+.. +++.||||++.... ......+.+.+|+.+++.++||||+++++++...+..
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 101 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEA--CSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNEL 101 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGG--SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccc--cChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEE
Confidence 4679999999999 99999999865 78999999997532 2234567788999999999999999999999999999
Q ss_pred eEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEecccccee
Q 047901 582 FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKL 661 (786)
Q Consensus 582 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~ 661 (786)
++||||+++|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||.+..
T Consensus 102 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~ 177 (389)
T 3gni_B 102 WVVTSFMAYGSAKDLICTH-FMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLS 177 (389)
T ss_dssp EEEEECCTTCBHHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEEEccCCCCHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEccccccee
Confidence 9999999999999999765 335689999999999999999999999 999999999999999999999999999876
Q ss_pred cCCCC-------CcceeeccCccccCCCCCCCCchHHHHhhh--cCcCcccchHHHHHHHHHHHhCCCCCCccccccCCC
Q 047901 662 LKPNS-------SNWTELVGTFGYVAPAHGNIGLHLAELAYT--MKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSS 732 (786)
Q Consensus 662 ~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~--~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~ 732 (786)
..... .......||+.|+|| |++.+ ..++.++||||+||++|||++|+.||..........
T Consensus 178 ~~~~~~~~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~ 247 (389)
T 3gni_B 178 MISHGQRQRVVHDFPKYSVKVLPWLSP----------EVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLL 247 (389)
T ss_dssp CEETTEECSCBCCCCTTCTTTGGGSCH----------HHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHH
T ss_pred eccccccccccccccccccccccccCH----------HHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence 53221 112234789999999 66665 578999999999999999999999997533211000
Q ss_pred cchhhhhhhhccC---------------------------CCCC-------CChhHHHHHHHHHHHHHhccCCCCCCCCC
Q 047901 733 SSINIEFNAMLDH---------------------------RLPH-------PSLDVQEKLISIMEVALLCLDGCPNSRPT 778 (786)
Q Consensus 733 ~~~~~~~~~~~~~---------------------------~~~~-------~~~~~~~~~~~l~~li~~cl~~~p~~RPt 778 (786)
...........+. .... ........+..+.+++.+||+.||++|||
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt 327 (389)
T 3gni_B 248 EKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPS 327 (389)
T ss_dssp HC--------------------------------------------------------CCHHHHHHHHHHTCSCTTTSCC
T ss_pred HHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCC
Confidence 0000000000000 0000 00011122346889999999999999999
Q ss_pred HHHHHH
Q 047901 779 MQTVCQ 784 (786)
Q Consensus 779 ~~ev~~ 784 (786)
++|+++
T Consensus 328 a~ell~ 333 (389)
T 3gni_B 328 ASTLLN 333 (389)
T ss_dssp HHHHTT
T ss_pred HHHHhc
Confidence 999975
No 120
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.7e-40 Score=356.07 Aligned_cols=261 Identities=23% Similarity=0.248 Sum_probs=204.7
Q ss_pred HHhccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCC-CCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCe
Q 047901 503 RRTKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFP-NDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRH 580 (786)
Q Consensus 503 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~ 580 (786)
...++|++.+.||+|+||+||+|+.. +++.||+|++..... .......+.+.+|+++++.++||||+++++++.+.+.
T Consensus 23 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 102 (345)
T 3hko_A 23 ELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQY 102 (345)
T ss_dssp HHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCe
Confidence 44667999999999999999999864 678999999854210 0122345789999999999999999999999999999
Q ss_pred eeEEEeccCCCCHHHHhhcCC-------------------------------------CCCCCCHHHHHHHHHHHHHHHH
Q 047901 581 SFVVYEYINRGSLATVLSNNF-------------------------------------ASEDFDWRKRMNVITGVADALS 623 (786)
Q Consensus 581 ~~lv~e~~~~g~L~~~l~~~~-------------------------------------~~~~~~~~~~~~i~~~ia~~l~ 623 (786)
.++||||+++|+|.+++.... ....+++..+..++.|++.||+
T Consensus 103 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~ 182 (345)
T 3hko_A 103 ICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALH 182 (345)
T ss_dssp EEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHH
Confidence 999999999999999985210 0112357778899999999999
Q ss_pred HHhhCCCCCeEEcCCCCCceeeCCCC--cEEEeccccceecCCCCC----cceeeccCccccCCCCCCCCchHHHHhhh-
Q 047901 624 YMHHDCFPPIVHRDISSNNVLLDLEY--EARVSDFGTAKLLKPNSS----NWTELVGTFGYVAPAHGNIGLHLAELAYT- 696 (786)
Q Consensus 624 ~LH~~~~~~ivHrdlk~~Nill~~~~--~~kl~Dfg~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~e~~~~- 696 (786)
|||+. +|+||||||+||+++.++ .+||+|||+++....... ......||+.|+|| |.+.+
T Consensus 183 ~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aP----------E~~~~~ 249 (345)
T 3hko_A 183 YLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAP----------EVLNTT 249 (345)
T ss_dssp HHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCH----------HHHTCS
T ss_pred HHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCc----------hhhccC
Confidence 99999 999999999999998776 899999999987643221 23456799999999 66654
Q ss_pred -cCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCC
Q 047901 697 -MKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNS 775 (786)
Q Consensus 697 -~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~ 775 (786)
..++.++|||||||++|||++|+.||.... .......+.......+.......+..+.+++..||..||++
T Consensus 250 ~~~~~~~~DiwslG~il~el~~g~~pf~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 321 (345)
T 3hko_A 250 NESYGPKCDAWSAGVLLHLLLMGAVPFPGVN--------DADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDE 321 (345)
T ss_dssp SSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTT
T ss_pred CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC--------hHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhH
Confidence 678899999999999999999999987432 22333444444444333333334456899999999999999
Q ss_pred CCCHHHHHH
Q 047901 776 RPTMQTVCQ 784 (786)
Q Consensus 776 RPt~~ev~~ 784 (786)
|||+.|+++
T Consensus 322 Rps~~~~l~ 330 (345)
T 3hko_A 322 RFDAMRALQ 330 (345)
T ss_dssp SCCHHHHHH
T ss_pred CCCHHHHhc
Confidence 999999986
No 121
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=5.3e-40 Score=350.63 Aligned_cols=250 Identities=22% Similarity=0.421 Sum_probs=197.7
Q ss_pred hccCccceeeccccCceEEEEEcC-CCC----EEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCC
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGD----KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVR 579 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~ 579 (786)
.++|+..+.||+|+||+||+|++. +++ +||+|.+... ......+.|.+|+.++++++||||+++++++....
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 90 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 90 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC----------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccc---cCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC
Confidence 357999999999999999999854 444 4688888642 22344578999999999999999999999998754
Q ss_pred eeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccc
Q 047901 580 HSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTA 659 (786)
Q Consensus 580 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a 659 (786)
.++|+||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|
T Consensus 91 -~~~v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a 164 (327)
T 3poz_A 91 -VQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA 164 (327)
T ss_dssp -EEEEEECCTTCBHHHHHHHS--TTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHH
T ss_pred -eEEEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcce
Confidence 78999999999999999864 35689999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCc--ceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCccccccCCCcchh
Q 047901 660 KLLKPNSSN--WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFLSLFSSSSSSIN 736 (786)
Q Consensus 660 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~ 736 (786)
+........ .....+|+.|+|| |...+..++.++|||||||++|||+| |+.||.....
T Consensus 165 ~~~~~~~~~~~~~~~~~t~~y~aP----------E~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--------- 225 (327)
T 3poz_A 165 KLLGAEEKEYHAEGGKVPIKWMAL----------ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--------- 225 (327)
T ss_dssp HHHTTTCC-------CCCGGGSCH----------HHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG---------
T ss_pred eEccCCcccccccCCCccccccCh----------HHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCH---------
Confidence 877544322 2234568899999 88888899999999999999999999 9999874321
Q ss_pred hhhhhhccC--CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 737 IEFNAMLDH--RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 737 ~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
......+.. +...+... ...+.+++..||+.||++|||+.|+++.|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~----~~~~~~li~~~l~~~p~~Rps~~ell~~l 273 (327)
T 3poz_A 226 SEISSILEKGERLPQPPIC----TIDVYMIMVKCWMIDADSRPKFRELIIEF 273 (327)
T ss_dssp GGHHHHHHTTCCCCCCTTB----CHHHHHHHHHHTCSCGGGSCCHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCccC----CHHHHHHHHHHcCCChhhCCCHHHHHHHH
Confidence 112222222 22223222 33588999999999999999999998753
No 122
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.1e-39 Score=349.46 Aligned_cols=251 Identities=20% Similarity=0.321 Sum_probs=210.3
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|.+.+.||+|+||.||+|+.. +++.||+|++..... ......+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 118 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLL-LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 118 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-CSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhh-cCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 457999999999999999999865 578899999865321 223456788999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecC
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK 663 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 663 (786)
||||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 119 v~e~~~~~~L~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 192 (335)
T 2owb_A 119 VLELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 192 (335)
T ss_dssp EECCCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEecCCCCCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence 99999999999998754 5689999999999999999999999 99999999999999999999999999999876
Q ss_pred CCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhhc
Q 047901 664 PNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAML 743 (786)
Q Consensus 664 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 743 (786)
..........||..|+|| |...+..++.++||||||+++|||++|+.||.... .......+.
T Consensus 193 ~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~~~~~~~~~ 254 (335)
T 2owb_A 193 YDGERKKVLCGTPNYIAP----------EVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC--------LKETYLRIK 254 (335)
T ss_dssp STTCCBCCCCSCCSSCCH----------HHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHH
T ss_pred cCcccccccCCCccccCH----------HHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCC--------HHHHHHHHh
Confidence 544444556899999999 77888889999999999999999999999987432 122223333
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 744 DHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 744 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
......+.... ..+.+++.+||+.||++|||++|+++
T Consensus 255 ~~~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 255 KNEYSIPKHIN----PVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp HTCCCCCTTSC----HHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred cCCCCCCccCC----HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 33333333222 34889999999999999999999986
No 123
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=4.3e-41 Score=367.66 Aligned_cols=256 Identities=22% Similarity=0.302 Sum_probs=204.2
Q ss_pred HHHHhccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCC
Q 047901 501 IIRRTKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVR 579 (786)
Q Consensus 501 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~ 579 (786)
+....++|+..+.||+|+||+||+|+.+ +++.||+|++..... ......+.+.+|+.+++.++||||+++++++.+.+
T Consensus 64 ~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~-~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 142 (410)
T 3v8s_A 64 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEM-IKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 142 (410)
T ss_dssp HSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-HHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred cccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhh-hhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence 3344678999999999999999999865 688999999853100 00112234788999999999999999999999999
Q ss_pred eeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccc
Q 047901 580 HSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTA 659 (786)
Q Consensus 580 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a 659 (786)
..|+||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|
T Consensus 143 ~~~lV~E~~~gg~L~~~l~~~----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a 215 (410)
T 3v8s_A 143 YLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTC 215 (410)
T ss_dssp EEEEEECCCTTEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEecccee
Confidence 999999999999999999753 588999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCC-cceeeccCccccCCCCCCCCchHHHHhhhcC----cCcccchHHHHHHHHHHHhCCCCCCccccccCCCcc
Q 047901 660 KLLKPNSS-NWTELVGTFGYVAPAHGNIGLHLAELAYTMK----ITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSS 734 (786)
Q Consensus 660 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~----~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~ 734 (786)
+....... .....+||+.|+|| |++.... ++.++|||||||++|||++|+.||....
T Consensus 216 ~~~~~~~~~~~~~~~gt~~Y~AP----------E~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~-------- 277 (410)
T 3v8s_A 216 MKMNKEGMVRCDTAVGTPDYISP----------EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS-------- 277 (410)
T ss_dssp EECCTTSEEECCSCCSCGGGCCH----------HHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSS--------
T ss_pred EeeccCCcccccCCcCCccccCH----------HHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCC--------
Confidence 87754432 22356899999999 6666544 7899999999999999999999987432
Q ss_pred hhhhhhhhccC--CCCCCChhHHHHHHHHHHHHHhccCCCCCC--CCCHHHHHH
Q 047901 735 INIEFNAMLDH--RLPHPSLDVQEKLISIMEVALLCLDGCPNS--RPTMQTVCQ 784 (786)
Q Consensus 735 ~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~~p~~--RPt~~ev~~ 784 (786)
.......+... ....|.. ...+..+.+++.+||..+|.+ ||+++||++
T Consensus 278 ~~~~~~~i~~~~~~~~~p~~--~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 278 LVGTYSKIMNHKNSLTFPDD--NDISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp HHHHHHHHHTHHHHCCCCTT--CCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred hhhHHHHHHhccccccCCCc--ccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 12222233221 1222210 112235889999999999988 999999975
No 124
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.8e-39 Score=340.12 Aligned_cols=254 Identities=27% Similarity=0.425 Sum_probs=200.2
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhh---HHHHHHHHHHHhhcCCCcccceeeEEecCCe
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSD---QKEFLNEIKALTKIRHRNIVKFYGFCSHVRH 580 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~---~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~ 580 (786)
.++|+..+.||+|+||+||+|+.. +++.||||++........... .+.+.+|+++++.++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 357999999999999999999864 789999999976433322222 267899999999999999999999987654
Q ss_pred eeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEEcCCCCCceeeCCCCc-----EEE
Q 047901 581 SFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPP--IVHRDISSNNVLLDLEYE-----ARV 653 (786)
Q Consensus 581 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~--ivHrdlk~~Nill~~~~~-----~kl 653 (786)
++||||+++|+|.+++... ...+++..+..++.|++.|++|||+. + |+||||||+||+++.++. +||
T Consensus 97 -~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl 170 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDK--AHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKV 170 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEE
T ss_pred -eEEEEecCCCCHHHHHhcc--cCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEe
Confidence 6999999999999998754 35789999999999999999999998 7 999999999999988776 999
Q ss_pred eccccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCc
Q 047901 654 SDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSS 733 (786)
Q Consensus 654 ~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~ 733 (786)
+|||+++.... ......||+.|+|||++.. ....+++++||||+||++|||++|+.||.....
T Consensus 171 ~Dfg~~~~~~~---~~~~~~g~~~y~aPE~~~~--------~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~------ 233 (287)
T 4f0f_A 171 ADFGLSQQSVH---SVSGLLGNFQWMAPETIGA--------EEESYTEKADTYSFAMILYTILTGEGPFDEYSY------ 233 (287)
T ss_dssp CCCTTCBCCSS---CEECCCCCCTTSCGGGSSC--------SSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCC------
T ss_pred CCCCccccccc---cccccCCCccccCchhhcc--------CCCCcCchhhHHHHHHHHHHHHcCCCCCccccc------
Confidence 99999985443 2345679999999953311 234578899999999999999999999874321
Q ss_pred chhhhhhhhccCCC--CCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 734 SINIEFNAMLDHRL--PHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 734 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
........+..... ..+.. .+..+.+++..||+.||++|||++|+++.|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~~L 284 (287)
T 4f0f_A 234 GKIKFINMIREEGLRPTIPED----CPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284 (287)
T ss_dssp CHHHHHHHHHHSCCCCCCCTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred cHHHHHHHHhccCCCCCCCcc----cCHHHHHHHHHHhcCChhhCcCHHHHHHHH
Confidence 11111122222221 22222 234589999999999999999999999864
No 125
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=366.98 Aligned_cols=320 Identities=20% Similarity=0.164 Sum_probs=206.7
Q ss_pred CCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCC-CCCCCCCCcEEEccCCcCcccCchhhcccCCcceecccc
Q 047901 52 LKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFP-PICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLDT 130 (786)
Q Consensus 52 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 130 (786)
-+.++.++++++ .+|..+ .++|+.|+|++|+|+++.+ .|..+++|++|+|++|+|+++.|..|.++++|++|+|++
T Consensus 13 ~~~v~c~~~~l~-~ip~~~--~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 89 (477)
T 2id5_A 13 DRAVLCHRKRFV-AVPEGI--PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRS 89 (477)
T ss_dssp TTEEECCSCCCS-SCCSCC--CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-cCCCCC--CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCC
Confidence 457888888887 445544 3578888888888887755 477888888888888888888888888888888888888
Q ss_pred ccccccCChhhhccCccceeecccccccCCCC-CcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccC
Q 047901 131 NQFTGQLPRNICRSGLLEILTVNDNHFLGSIP-NLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEIS 209 (786)
Q Consensus 131 N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~-~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~ 209 (786)
|+++...+..|..+++|+.|+|++|.+....+ .+.++++|+.|++++|.++++.+..|..+++|++|+|++|+++++.+
T Consensus 90 n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 169 (477)
T 2id5_A 90 NRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPT 169 (477)
T ss_dssp SCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCH
T ss_pred CcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccCh
Confidence 88886665666666666666666666665443 35566666666666666666666666666666666666666665555
Q ss_pred cCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCCCCcccccccccccccccccCCCCccccccCCc
Q 047901 210 SNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTE 289 (786)
Q Consensus 210 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 289 (786)
..|..+++|+.|+|++|.+.++.+..|..+++|+.|++++|.+.+.++.......+|+.|+|++|+++.+.+..|..+++
T Consensus 170 ~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 249 (477)
T 2id5_A 170 EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVY 249 (477)
T ss_dssp HHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTT
T ss_pred hHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccc
Confidence 55666666666666666666555556666666666666666555444444444445666666666665554455556666
Q ss_pred CceeccccccccccchhhhhcccCCcEEEecccccCCCcchHHhhhcCcCeeeccCCccCCCCCcccccccccceecccc
Q 047901 290 LEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQEIPEDLALLAHLSELDLSHNLFKGSIPSRICNLESLEKLNLSH 369 (786)
Q Consensus 290 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 369 (786)
|+.|+|++|+++.+.+..|..+++|++|+|++|++++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++
T Consensus 250 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 329 (477)
T 2id5_A 250 LRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDS 329 (477)
T ss_dssp CCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCS
T ss_pred cCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccC
Confidence 66666666666655555555555666666666666555555555555566666666655554445555555555555555
Q ss_pred ccccc
Q 047901 370 NNISG 374 (786)
Q Consensus 370 N~l~~ 374 (786)
|++.+
T Consensus 330 N~l~c 334 (477)
T 2id5_A 330 NPLAC 334 (477)
T ss_dssp SCEEC
T ss_pred CCccC
Confidence 55543
No 126
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.8e-39 Score=364.10 Aligned_cols=317 Identities=22% Similarity=0.190 Sum_probs=198.0
Q ss_pred EEEcCCCCCcccCCcCccCCCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCc
Q 047901 5 SINLTSTGLKGTLQEFSFSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLN 84 (786)
Q Consensus 5 ~l~l~~~~l~~~l~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 84 (786)
.++.+++++. .+|.. + .+++++|||++|+|+++.+..|.++++|++|+|++|+|+++.|.+|..+++|++|+|++|
T Consensus 15 ~v~c~~~~l~-~ip~~-~--~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 15 AVLCHRKRFV-AVPEG-I--PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp EEECCSCCCS-SCCSC-C--CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-cCCCC-C--CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 4566666665 56652 2 256788888888887777777888888888888888887777778888888888888888
Q ss_pred cCcccCCC-CCCCCCCcEEEccCCcCcccCchhhcccCCcceeccccccccccCChhhhccCccceeecccccccCCCCC
Q 047901 85 QFSGTFPP-ICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPN 163 (786)
Q Consensus 85 ~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~ 163 (786)
+++++++. |.++++|++|+|++|+++++.+..|.++++|++|+|++|++++..+..|..+++|+.|++++|.+++.++.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 88776664 67778888888888888777777777888888888888877766666666666666666666666554432
Q ss_pred -cCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccc
Q 047901 164 -LRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQL 242 (786)
Q Consensus 164 -l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 242 (786)
+.++++|+.|++++|.++++.+..|..+++|++|++++|.+.+..+.......+|++|+|++|+++.+.+..|..+++|
T Consensus 171 ~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L 250 (477)
T 2id5_A 171 ALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYL 250 (477)
T ss_dssp HHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTC
T ss_pred HhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCcccc
Confidence 4555555555555555555555555555555555555554444333333333455555555555554333445555555
Q ss_pred cEEEeecccccccCCCCcccccccccccccccccCCCCccccccCCcCceeccccccccccchhhhhcccCCcEEEeccc
Q 047901 243 HVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHN 322 (786)
Q Consensus 243 ~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 322 (786)
+.|+|++|.+++..+..|..+++|+.|+|++|+++++.+..|..+++|+.|+|++|+++.+++..|..+++|++|+|++|
T Consensus 251 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 330 (477)
T 2id5_A 251 RFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSN 330 (477)
T ss_dssp CEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSS
T ss_pred CeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCC
Confidence 55555555555554555555555555555555555555555555555555555555555555545555555555555555
Q ss_pred ccC
Q 047901 323 QFS 325 (786)
Q Consensus 323 ~l~ 325 (786)
.++
T Consensus 331 ~l~ 333 (477)
T 2id5_A 331 PLA 333 (477)
T ss_dssp CEE
T ss_pred Ccc
Confidence 544
No 127
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1e-39 Score=340.69 Aligned_cols=251 Identities=23% Similarity=0.351 Sum_probs=193.0
Q ss_pred hccCccceeeccccCceEEEEEcCC----CCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCe
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLPS----GDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRH 580 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~ 580 (786)
.++|++.+.||+|+||+||+|+... +..||+|++... ......+.+.+|+.++++++||||+++++++. ++.
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~ 89 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC---TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENP 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT---TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSS
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc---CCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCc
Confidence 4579999999999999999998643 346999998652 23345678999999999999999999999985 467
Q ss_pred eeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccce
Q 047901 581 SFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAK 660 (786)
Q Consensus 581 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~ 660 (786)
.++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 164 (281)
T 1mp8_A 90 VWIIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 164 (281)
T ss_dssp CEEEEECCTTEEHHHHHHHT--TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-----
T ss_pred cEEEEecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECcccccc
Confidence 89999999999999999764 34689999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCC-cceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCccccccCCCcchhhh
Q 047901 661 LLKPNSS-NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFLSLFSSSSSSINIE 738 (786)
Q Consensus 661 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~ 738 (786)
....... ......+++.|+|| |......++.++||||||+++|||++ |..||..... ...
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~--------~~~ 226 (281)
T 1mp8_A 165 YMEDSTYYKASKGKLPIKWMAP----------ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN--------NDV 226 (281)
T ss_dssp --------------CCGGGCCH----------HHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG--------GGH
T ss_pred ccCcccccccccCCCcccccCh----------hhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCH--------HHH
Confidence 7754322 12334577899999 78888889999999999999999997 9999874321 112
Q ss_pred hhhhccC-CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 739 FNAMLDH-RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 739 ~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
...+... ....+.. .+..+.+++..||+.||++|||+.|+++.|
T Consensus 227 ~~~i~~~~~~~~~~~----~~~~l~~li~~~l~~~p~~Rps~~~l~~~l 271 (281)
T 1mp8_A 227 IGRIENGERLPMPPN----CPPTLYSLMTKCWAYDPSRRPRFTELKAQL 271 (281)
T ss_dssp HHHHHTTCCCCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHHcCCCCCCCCC----CCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 2222222 1222222 234588999999999999999999999864
No 128
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=3.7e-40 Score=367.24 Aligned_cols=250 Identities=24% Similarity=0.426 Sum_probs=200.2
Q ss_pred hccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeEE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVV 584 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 584 (786)
.++|+..+.||+|+||+||+|.+.++..||||++.... ...+.|.+|++++++++||||+++++++.+ +..++|
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv 256 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 256 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-----CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEE
Confidence 45789999999999999999999888889999997522 234679999999999999999999999876 678999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecCC
Q 047901 585 YEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKP 664 (786)
Q Consensus 585 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 664 (786)
|||+++|+|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 257 ~e~~~~gsL~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 332 (452)
T 1fmk_A 257 TEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 332 (452)
T ss_dssp ECCCTTCBHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred ehhhcCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCC
Confidence 9999999999999753 224589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCC-cceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCccccccCCCcchhhhhhhh
Q 047901 665 NSS-NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFLSLFSSSSSSINIEFNAM 742 (786)
Q Consensus 665 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~ 742 (786)
... ......++..|+|| |......++.++|||||||++|||++ |+.||..... .+....+
T Consensus 333 ~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~--------~~~~~~i 394 (452)
T 1fmk_A 333 NEYTARQGAKFPIKWTAP----------EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--------REVLDQV 394 (452)
T ss_dssp ----------CCGGGSCH----------HHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--------HHHHHHH
T ss_pred CceecccCCcccccccCH----------hHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH--------HHHHHHH
Confidence 322 12234577899999 78888899999999999999999999 9999874321 1112222
Q ss_pred cc-CCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 743 LD-HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 743 ~~-~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
.. .+.+.|.. .+..+.++|..||+.||++|||++++++.|
T Consensus 395 ~~~~~~~~~~~----~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L 435 (452)
T 1fmk_A 395 ERGYRMPCPPE----CPESLHDLMCQCWRKEPEERPTFEYLQAFL 435 (452)
T ss_dssp HTTCCCCCCTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HcCCCCCCCCC----CCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 22 12333332 234588999999999999999999998764
No 129
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=4.4e-39 Score=358.12 Aligned_cols=342 Identities=19% Similarity=0.163 Sum_probs=258.9
Q ss_pred ccCCCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCCCCCCCCCCc
Q 047901 21 SFSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFPPICNLSNLK 100 (786)
Q Consensus 21 ~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~ 100 (786)
+|..+++|++|||++|.++++ | .|..+++|++|+|++|+|+++ | |+.+++|++|+|++|++++++ +..+++|+
T Consensus 37 ~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~~--~~~l~~L~ 109 (457)
T 3bz5_A 37 SEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNLD--VTPLTKLT 109 (457)
T ss_dssp EHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCCC--CTTCTTCC
T ss_pred ChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCceee--cCCCCcCC
Confidence 566778888888888888765 3 577788888888888888764 3 777888888888888887653 77788888
Q ss_pred EEEccCCcCcccCchhhcccCCcceeccccccccccCChhhhccCccceeecccccccCCCCCcCCCCCCcEEEccCccc
Q 047901 101 YISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNL 180 (786)
Q Consensus 101 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l 180 (786)
+|+|++|+++++ + |+.+++|++|++++|++++. + +..+++|+.|++++|...+.. .+..+++|+.|++++|+|
T Consensus 110 ~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~-~~~~l~~L~~L~ls~n~l 182 (457)
T 3bz5_A 110 YLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL-DVTPQTQLTTLDCSFNKI 182 (457)
T ss_dssp EEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC-CCTTCTTCCEEECCSSCC
T ss_pred EEECCCCcCCee-c--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc-ccccCCcCCEEECCCCcc
Confidence 888888888765 2 77788888888888888763 2 677778888888888544433 466778888888888888
Q ss_pred ccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCCCCc
Q 047901 181 TGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMEL 260 (786)
Q Consensus 181 ~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~ 260 (786)
+++. +..+++|++|++++|+++++ .+..+++|+.|++++|++++ +| +..+++|+.|++++|++++..+..+
T Consensus 183 ~~l~---l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l 253 (457)
T 3bz5_A 183 TELD---VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTL 253 (457)
T ss_dssp CCCC---CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTC
T ss_pred ceec---cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHC
Confidence 8753 77778888888888888765 37777888888888888886 34 7777888888888888887665555
Q ss_pred cccc-------ccccccccccccCCCCccccccCCcCceeccccccccccchh--------hhhcccCCcEEEecccccC
Q 047901 261 GRLI-------SLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSILE--------ALGFMFKLFYLNFSHNQFS 325 (786)
Q Consensus 261 ~~l~-------~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~--------~~~~l~~L~~L~L~~N~l~ 325 (786)
.++. +|+.|++++|.+.+..| ++.+++|+.|++++|...+..+. .+..+++|++|++++|+++
T Consensus 254 ~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~ 331 (457)
T 3bz5_A 254 SKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELT 331 (457)
T ss_dssp TTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCS
T ss_pred CCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCccc
Confidence 5554 55677777777665554 56778888888888874332221 3556688999999999999
Q ss_pred CCcchHHhhhcCcCeeeccCCccCCCCCcccccccccceeccccccccccCCcccccCCCceEEeccCCcccccCCCC
Q 047901 326 QEIPEDLALLAHLSELDLSHNLFKGSIPSRICNLESLEKLNLSHNNISGQIPACFIGMSGLLSIDISYNELRGPIPNS 403 (786)
Q Consensus 326 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 403 (786)
+. + +..+++|+.|++++|+|++ ++.|..|++++|.++|. ..+..|..+++++|+++|.+|..
T Consensus 332 ~l-~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 332 EL-D--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPD 393 (457)
T ss_dssp CC-C--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTT
T ss_pred cc-c--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChh
Confidence 75 3 8889999999999999984 35678889999999876 24566778899999999998864
No 130
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=6.1e-40 Score=342.10 Aligned_cols=249 Identities=27% Similarity=0.449 Sum_probs=202.7
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|++.+.||+|+||+||+|+.. +++.||||++.... .........+.+|+++++.++||||+++++++.+.+..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ-LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH-HHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccc-cchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 467999999999999999999865 67789999985411 0112234578899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecC
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK 663 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 663 (786)
||||+++|+|.+++... ..+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 87 v~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~ 160 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP 160 (279)
T ss_dssp EECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC-
T ss_pred EEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCC
Confidence 99999999999999764 5689999999999999999999998 99999999999999999999999999986554
Q ss_pred CCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhhc
Q 047901 664 PNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAML 743 (786)
Q Consensus 664 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 743 (786)
.. ......||+.|+|| |...+..++.++||||+|+++|+|++|+.||.... .......+.
T Consensus 161 ~~--~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~ 220 (279)
T 3fdn_A 161 SS--RRTDLCGTLDYLPP----------EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQETYKRIS 220 (279)
T ss_dssp ---------CCCCTTCCH----------HHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHH
T ss_pred cc--cccccCCCCCccCH----------hHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCc--------HHHHHHHHH
Confidence 32 22345789999999 77888888999999999999999999999987432 122233333
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 744 DHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 744 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
......+.... ..+.+++..||+.||++|||++|+++
T Consensus 221 ~~~~~~~~~~~----~~~~~li~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 221 RVEFTFPDFVT----EGARDLISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp HTCCCCCTTSC----HHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred hCCCCCCCcCC----HHHHHHHHHHhccChhhCCCHHHHhh
Confidence 33333333222 34889999999999999999999986
No 131
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.6e-40 Score=346.11 Aligned_cols=250 Identities=28% Similarity=0.456 Sum_probs=194.4
Q ss_pred hccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeEE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVV 584 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 584 (786)
.++|++.+.||+|+||+||+|++. ++.||||++.. ....+.|.+|++++++++||||+++++++.+ ..++|
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~------~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv 77 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIES------ESERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLV 77 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSS------TTHHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEE
T ss_pred HhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecC------hhHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEE
Confidence 357899999999999999999885 78899999864 2345789999999999999999999998874 47899
Q ss_pred EeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCc-EEEeccccceecC
Q 047901 585 YEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYE-ARVSDFGTAKLLK 663 (786)
Q Consensus 585 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~-~kl~Dfg~a~~~~ 663 (786)
|||+++|+|.+++........+++..++.++.|+++||+|||+....+|+||||||+||+++.++. +||+|||++....
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~ 157 (307)
T 2eva_A 78 MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ 157 (307)
T ss_dssp EECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-----
T ss_pred EEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccc
Confidence 999999999999986644446789999999999999999999932229999999999999988876 7999999997654
Q ss_pred CCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhhc
Q 047901 664 PNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAML 743 (786)
Q Consensus 664 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 743 (786)
.. .....||+.|+|| |...+..++.++||||||+++|||++|+.||+.... ..........
T Consensus 158 ~~---~~~~~gt~~y~aP----------E~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------~~~~~~~~~~ 218 (307)
T 2eva_A 158 TH---MTNNKGSAAWMAP----------EVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGG------PAFRIMWAVH 218 (307)
T ss_dssp ----------CCTTSSCH----------HHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCS------SHHHHHHHHH
T ss_pred cc---cccCCCCCceECh----------hhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCc------cHHHHHHHHh
Confidence 32 2334699999999 778888899999999999999999999999874321 1111111111
Q ss_pred cC-CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 744 DH-RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 744 ~~-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
.. +...+. ..+..+.+++.+||+.||++|||++|+++.|
T Consensus 219 ~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~ell~~L 258 (307)
T 2eva_A 219 NGTRPPLIK----NLPKPIESLMTRCWSKDPSQRPSMEEIVKIM 258 (307)
T ss_dssp TTCCCCCBT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred cCCCCCccc----ccCHHHHHHHHHHhcCChhhCcCHHHHHHHH
Confidence 11 111111 1233588999999999999999999998864
No 132
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1e-39 Score=348.19 Aligned_cols=255 Identities=23% Similarity=0.376 Sum_probs=190.1
Q ss_pred hccCccceeeccccCceEEEEEcCCCC----EEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCe
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLPSGD----KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRH 580 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~----~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~ 580 (786)
.++|+..+.||+|+||+||+|+..... .||||++..... .....+.+.+|++++++++||||+++++++.....
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADII--ASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC--------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEeccccc--CHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 457999999999999999999876432 799999975321 23456789999999999999999999999987665
Q ss_pred e------eEEEeccCCCCHHHHhhcCC---CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcE
Q 047901 581 S------FVVYEYINRGSLATVLSNNF---ASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEA 651 (786)
Q Consensus 581 ~------~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~ 651 (786)
. ++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCE
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCE
Confidence 5 99999999999999996432 122589999999999999999999999 99999999999999999999
Q ss_pred EEeccccceecCCCCC--cceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCccccc
Q 047901 652 RVSDFGTAKLLKPNSS--NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFLSLF 728 (786)
Q Consensus 652 kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~~~~ 728 (786)
||+|||+|+....... ......+++.|+|| |...+..++.++|||||||++|||++ |+.||.....
T Consensus 177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~- 245 (323)
T 3qup_A 177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLAL----------ESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN- 245 (323)
T ss_dssp EECCCCC-----------------CCGGGCCH----------HHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG-
T ss_pred EEeeccccccccccccccccccccCcccccCc----------hhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccCh-
Confidence 9999999987654322 12234578899999 78888889999999999999999999 9999875321
Q ss_pred cCCCcchhhhhhhhccCC-CCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 729 SSSSSSINIEFNAMLDHR-LPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
......+.... ...+.. .+..+.+++..||+.||++|||+.++++.|
T Consensus 246 -------~~~~~~~~~~~~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~l~~~l 293 (323)
T 3qup_A 246 -------AEIYNYLIGGNRLKQPPE----CMEEVYDLMYQCWSADPKQRPSFTCLRMEL 293 (323)
T ss_dssp -------GGHHHHHHTTCCCCCCTT----CCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred -------HHHHHHHhcCCCCCCCCc----cCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 12222222222 222222 223588999999999999999999998764
No 133
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.6e-39 Score=339.73 Aligned_cols=254 Identities=19% Similarity=0.291 Sum_probs=205.8
Q ss_pred ccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCC--chhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeee
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPND--QMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSF 582 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~ 582 (786)
++|++.+.||+|+||+||+|+.. +++.||||++....... .....+.+.+|+++++.++||||+++++++...+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 46999999999999999999876 68999999987543221 1224678999999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCC----cEEEecccc
Q 047901 583 VVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEY----EARVSDFGT 658 (786)
Q Consensus 583 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~----~~kl~Dfg~ 658 (786)
+||||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++ .+||+|||.
T Consensus 85 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~ 158 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEK---ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 158 (283)
T ss_dssp EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEeecCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEeccc
Confidence 999999999999999754 5689999999999999999999999 999999999999998877 899999999
Q ss_pred ceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhh
Q 047901 659 AKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIE 738 (786)
Q Consensus 659 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~ 738 (786)
+....... ......|++.|+|| |...+..++.++||||||+++|||++|+.||.... ....
T Consensus 159 ~~~~~~~~-~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~ 219 (283)
T 3bhy_A 159 AHKIEAGN-EFKNIFGTPEFVAP----------EIVNYEPLGLEADMWSIGVITYILLSGASPFLGET--------KQET 219 (283)
T ss_dssp CEECC---------CCCGGGCCH----------HHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHH
T ss_pred ceeccCCC-cccccCCCcCccCc----------ceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcc--------hHHH
Confidence 98775432 23345799999999 77778889999999999999999999999987432 1222
Q ss_pred hhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 739 FNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
...+.......+.......+..+.+++.+||..||++|||+.|+++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 220 LTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp HHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 2223333332222222233456889999999999999999999986
No 134
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.3e-39 Score=351.86 Aligned_cols=252 Identities=23% Similarity=0.263 Sum_probs=194.7
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|++.+.||+|+||+||+|+.. +++.||||++.... ...+.+.+|+.+++.++||||+++++++...+..++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 93 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-----AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAI 93 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-----TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-----cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEE
Confidence 457999999999999999999865 78899999997522 123567899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCc--EEEecccccee
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYE--ARVSDFGTAKL 661 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~--~kl~Dfg~a~~ 661 (786)
||||+++|+|.+++... +.+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||+|+.
T Consensus 94 v~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~ 167 (361)
T 3uc3_A 94 IMEYASGGELYERICNA---GRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKS 167 (361)
T ss_dssp EEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC--
T ss_pred EEEeCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccc
Confidence 99999999999999754 4689999999999999999999999 9999999999999987765 99999999975
Q ss_pred cCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcc-cchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhh
Q 047901 662 LKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEK-CDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFN 740 (786)
Q Consensus 662 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~-sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~ 740 (786)
.... .......||+.|+|| |.+.+..++.+ +||||+||++|||++|+.||...... ........
T Consensus 168 ~~~~-~~~~~~~gt~~y~aP----------E~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~----~~~~~~~~ 232 (361)
T 3uc3_A 168 SVLH-SQPKSTVGTPAYIAP----------EVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEP----RDYRKTIQ 232 (361)
T ss_dssp --------------CTTSCH----------HHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----C----CCHHHHHH
T ss_pred cccc-CCCCCCcCCCCcCCh----------hhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccH----HHHHHHHH
Confidence 4322 223345799999999 77777777655 99999999999999999998753321 11222233
Q ss_pred hhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 741 AMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.+.......+.. ...+..+.+++.+||..||++|||+.|+++
T Consensus 233 ~~~~~~~~~~~~--~~~s~~~~~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 233 RILSVKYSIPDD--IRISPECCHLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp HHHTTCCCCCTT--SCCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHhcCCCCCCCc--CCCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence 333333332221 011235889999999999999999999975
No 135
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=8.5e-40 Score=349.77 Aligned_cols=246 Identities=20% Similarity=0.312 Sum_probs=203.5
Q ss_pred HhccCccceeeccccCceEEEEEc-CCCCEEEEEEcCCCCCCCc----hhhHHHHHHHHHHHhhcCCCcccceeeEEecC
Q 047901 504 RTKDFDAKYCIGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQ----MSDQKEFLNEIKALTKIRHRNIVKFYGFCSHV 578 (786)
Q Consensus 504 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~----~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~ 578 (786)
..++|+..+.||+|+||+||+|+. .+++.||||++........ ....+.+.+|+++++.++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 356899999999999999999985 4788999999976432111 11234577899999999999999999999999
Q ss_pred CeeeEEEeccCCC-CHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccc
Q 047901 579 RHSFVVYEYINRG-SLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFG 657 (786)
Q Consensus 579 ~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg 657 (786)
+..++||||+.+| +|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg 175 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRH---PRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFG 175 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTC---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCT
T ss_pred CEEEEEEEeCCCCccHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecc
Confidence 9999999999777 999999754 5689999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCc-CcccchHHHHHHHHHHHhCCCCCCccccccCCCcchh
Q 047901 658 TAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKI-TEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSIN 736 (786)
Q Consensus 658 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~-~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~ 736 (786)
+++...... ......||+.|+|| |...+..+ +.++|||||||++|||++|+.||.....
T Consensus 176 ~a~~~~~~~-~~~~~~gt~~y~aP----------E~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------- 235 (335)
T 3dls_A 176 SAAYLERGK-LFYTFCGTIEYCAP----------EVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE--------- 235 (335)
T ss_dssp TCEECCTTC-CBCEECSCGGGCCH----------HHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG---------
T ss_pred cceECCCCC-ceeccCCCccccCh----------hhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH---------
Confidence 998876543 23456799999999 77776666 7899999999999999999999864221
Q ss_pred hhhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 737 IEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
........+... +..+.+++..||++||++|||++|+++
T Consensus 236 -----~~~~~~~~~~~~----~~~l~~li~~~L~~dP~~Rps~~ell~ 274 (335)
T 3dls_A 236 -----TVEAAIHPPYLV----SKELMSLVSGLLQPVPERRTTLEKLVT 274 (335)
T ss_dssp -----GTTTCCCCSSCC----CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -----HHhhccCCCccc----CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111222222222 234889999999999999999999986
No 136
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.4e-39 Score=346.00 Aligned_cols=259 Identities=21% Similarity=0.325 Sum_probs=200.0
Q ss_pred ccCccc-eeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhc-CCCcccceeeEEecCCeee
Q 047901 506 KDFDAK-YCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSF 582 (786)
Q Consensus 506 ~~~~~~-~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~ 582 (786)
+.|++. +.||+|+||+||+|+.. +++.||||++... .....+.+.+|++++.++ +||||+++++++.+.+..+
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~ 87 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQ----PGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFY 87 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECC----SSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeC----cchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEE
Confidence 467774 78999999999999854 7899999999753 223456788999999985 7999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCc---EEEeccccc
Q 047901 583 VVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYE---ARVSDFGTA 659 (786)
Q Consensus 583 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~---~kl~Dfg~a 659 (786)
+||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++
T Consensus 88 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~ 161 (316)
T 2ac3_A 88 LVFEKMRGGSILSHIHKR---RHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLG 161 (316)
T ss_dssp EEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCC
T ss_pred EEEEcCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCc
Confidence 999999999999999764 4689999999999999999999999 9999999999999998765 999999999
Q ss_pred eecCCCCC-------cceeeccCccccCCCCCCCCchHHHHhhh-----cCcCcccchHHHHHHHHHHHhCCCCCCcccc
Q 047901 660 KLLKPNSS-------NWTELVGTFGYVAPAHGNIGLHLAELAYT-----MKITEKCDVYSFGVLALEVIKGKHPGDFLSL 727 (786)
Q Consensus 660 ~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~e~~~~-----~~~~~~sDvwslGvil~elltg~~Pf~~~~~ 727 (786)
........ ......||+.|+|| |.... ..++.++|||||||++|||++|+.||.....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~ 231 (316)
T 2ac3_A 162 SGIKLNGDCSPISTPELLTPCGSAEYMAP----------EVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCG 231 (316)
T ss_dssp C-------------------CCSGGGCCH----------HHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCC
T ss_pred cccccCCccccccccccccccCCcCccCh----------HHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccc
Confidence 86542211 12234699999999 55543 5588999999999999999999999875432
Q ss_pred ccCCCc-------chhhhhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 728 FSSSSS-------SINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 728 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
...... ........+.......+.......+..+.+++.+||+.||++|||++|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 232 SDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp SCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ccccccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 110000 011122333334444443222233456899999999999999999999986
No 137
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.2e-39 Score=351.07 Aligned_cols=199 Identities=23% Similarity=0.299 Sum_probs=175.4
Q ss_pred HhccCccceeeccccCceEEEEEc-CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcC-----CCcccceeeEEec
Q 047901 504 RTKDFDAKYCIGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIR-----HRNIVKFYGFCSH 577 (786)
Q Consensus 504 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-----hpniv~l~~~~~~ 577 (786)
..++|++.+.||+|+||+||+|+. .+++.||||++.. .......+..|+++++.++ ||||+++++++..
T Consensus 33 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~-----~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~ 107 (360)
T 3llt_A 33 LNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN-----IKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMY 107 (360)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS-----CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEE
T ss_pred ecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc-----chhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeE
Confidence 356899999999999999999986 4788999999863 2344567788999999986 9999999999999
Q ss_pred CCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCC----------
Q 047901 578 VRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDL---------- 647 (786)
Q Consensus 578 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~---------- 647 (786)
.+..++||||+ +++|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+|||++.
T Consensus 108 ~~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~~ 182 (360)
T 3llt_A 108 YDHMCLIFEPL-GPSLYEIITRN-NYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITV 182 (360)
T ss_dssp TTEEEEEECCC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEEE
T ss_pred CCeeEEEEcCC-CCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccch
Confidence 99999999999 88999999865 334689999999999999999999999 9999999999999975
Q ss_pred ---------------CCcEEEeccccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHH
Q 047901 648 ---------------EYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLA 712 (786)
Q Consensus 648 ---------------~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil 712 (786)
++.+||+|||+|+..... .....||+.|+|| |+..+..++.++||||+||++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~---~~~~~gt~~y~aP----------E~~~~~~~~~~~DiwslG~il 249 (360)
T 3llt_A 183 RRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY---HGSIINTRQYRAP----------EVILNLGWDVSSDMWSFGCVL 249 (360)
T ss_dssp ECTTTCCEEEEEEESCCCEEECCCTTCEETTSC---CCSCCSCGGGCCH----------HHHTTCCCCTTHHHHHHHHHH
T ss_pred hcccccccccccccCCCCEEEEeccCceecCCC---CcCccCcccccCc----------HHHcCCCCCCccchHHHHHHH
Confidence 789999999999876532 2345799999999 788888899999999999999
Q ss_pred HHHHhCCCCCCcc
Q 047901 713 LEVIKGKHPGDFL 725 (786)
Q Consensus 713 ~elltg~~Pf~~~ 725 (786)
|||++|+.||...
T Consensus 250 ~ell~g~~pf~~~ 262 (360)
T 3llt_A 250 AELYTGSLLFRTH 262 (360)
T ss_dssp HHHHHSSCSCCCS
T ss_pred HHHHHCCCCCCCC
Confidence 9999999998753
No 138
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=344.69 Aligned_cols=246 Identities=21% Similarity=0.238 Sum_probs=195.1
Q ss_pred ccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhc-CCCcccceeeEEecCCeeeE
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~l 583 (786)
++|+..++||+|+||+||+|+.. +++.||||++..... .......+..|+..+..+ +||||+++++++.+.+..++
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFR--GPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCC--SHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEeccccc--ChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 57999999999999999999876 789999999865322 223344556666666655 89999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecC
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK 663 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 663 (786)
||||+ +++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 135 v~e~~-~~~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~ 208 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAW--GASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELG 208 (311)
T ss_dssp EEECC-CCBHHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred EEecc-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence 99999 66999988765 35699999999999999999999999 99999999999999999999999999998775
Q ss_pred CCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhhc
Q 047901 664 PNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAML 743 (786)
Q Consensus 664 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 743 (786)
... ......||+.|+|| |+..+ .++.++|||||||++|||++|..|+.... ....+.
T Consensus 209 ~~~-~~~~~~gt~~y~aP----------E~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~-----------~~~~~~ 265 (311)
T 3p1a_A 209 TAG-AGEVQEGDPRYMAP----------ELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE-----------GWQQLR 265 (311)
T ss_dssp -------CCCCCGGGCCG----------GGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH-----------HHHHHT
T ss_pred cCC-CCcccCCCccccCH----------hHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc-----------HHHHHh
Confidence 432 23345799999999 55544 68999999999999999999977654211 122222
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 744 DHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 744 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.... +.......+..+.+++..||++||++|||++|+++
T Consensus 266 ~~~~--~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 266 QGYL--PPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp TTCC--CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccCC--CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 2221 11122223456899999999999999999999986
No 139
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.1e-39 Score=366.85 Aligned_cols=258 Identities=22% Similarity=0.250 Sum_probs=210.7
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|...+.||+|+||+||+|+.+ +++.||||++..... ........+.+|+.+++.++||||+++++++...+..|+
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~-~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 262 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRL-KKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCL 262 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHh-hhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEE
Confidence 357899999999999999999875 689999999864210 111234678899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceec
Q 047901 584 VYEYINRGSLATVLSNNFA-SEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLL 662 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~ 662 (786)
||||+++|+|.+++..... ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 263 VmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~ 339 (543)
T 3c4z_A 263 VMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339 (543)
T ss_dssp EECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeec
Confidence 9999999999999976422 35699999999999999999999999 9999999999999999999999999999987
Q ss_pred CCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhh
Q 047901 663 KPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAM 742 (786)
Q Consensus 663 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 742 (786)
..........+||+.|+|| |++.+..++.++|||||||++|||++|+.||..... ..........+
T Consensus 340 ~~~~~~~~~~~GT~~Y~AP----------E~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~----~~~~~~~~~~i 405 (543)
T 3c4z_A 340 KAGQTKTKGYAGTPGFMAP----------ELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE----KVENKELKQRV 405 (543)
T ss_dssp CTTCCCBCCCCSCTTTSCH----------HHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTC----CCCHHHHHHHH
T ss_pred cCCCcccccccCCccccCh----------hhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCcc----chhHHHHHHHH
Confidence 6554444456899999999 788888899999999999999999999999875321 11122333344
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCH-----HHHHH
Q 047901 743 LDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTM-----QTVCQ 784 (786)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~-----~ev~~ 784 (786)
.......|... +..+.+++..||.+||++||++ +++++
T Consensus 406 ~~~~~~~p~~~----s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 406 LEQAVTYPDKF----SPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp HHCCCCCCTTS----CHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred hhcccCCCccc----CHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 44444444332 3358899999999999999975 56653
No 140
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.9e-39 Score=344.04 Aligned_cols=261 Identities=22% Similarity=0.316 Sum_probs=197.9
Q ss_pred ccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeEE
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVV 584 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 584 (786)
++|+..+.||+|+||+||+|+.. +++.||||++.... ......+.+.+|++++++++||||+++++++...+..++|
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE--DDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLV 80 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCC--C-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccc--cchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEE
Confidence 57999999999999999999865 58999999986532 2334466788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecCC
Q 047901 585 YEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKP 664 (786)
Q Consensus 585 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 664 (786)
|||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.++....
T Consensus 81 ~e~~~~~~l~~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 154 (311)
T 4agu_A 81 FEYCDHTVLHELDRYQ---RGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTG 154 (311)
T ss_dssp EECCSEEHHHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EEeCCCchHHHHHhhh---cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccC
Confidence 9999999999988743 5689999999999999999999999 999999999999999999999999999998765
Q ss_pred CCCcceeeccCccccCCCCCCCCchHHHHhhh-cCcCcccchHHHHHHHHHHHhCCCCCCccccccCCC----------c
Q 047901 665 NSSNWTELVGTFGYVAPAHGNIGLHLAELAYT-MKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSS----------S 733 (786)
Q Consensus 665 ~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~-~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~----------~ 733 (786)
.........||+.|+|| |...+ ..++.++||||+|+++|||++|+.||.......... .
T Consensus 155 ~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 224 (311)
T 4agu_A 155 PSDYYDDEVATRWYRSP----------ELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIP 224 (311)
T ss_dssp -----------GGGCCH----------HHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCH
T ss_pred cccccCCCcCCccccCh----------HHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccc
Confidence 54445566899999999 66654 668999999999999999999999987533210000 0
Q ss_pred chhhhh--hh-hccCCCCCCCh------hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 734 SINIEF--NA-MLDHRLPHPSL------DVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 734 ~~~~~~--~~-~~~~~~~~~~~------~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
...... .. ......+.+.. .....+..+.+++..||+.||++|||++|+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 225 RHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp HHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred ccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 000000 00 00001111100 00122345889999999999999999999985
No 141
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=3.1e-39 Score=349.68 Aligned_cols=261 Identities=23% Similarity=0.371 Sum_probs=210.7
Q ss_pred HHHHHHhccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCc----hhhHHHHHHHHHHHhhc-CCCccccee
Q 047901 499 EEIIRRTKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQ----MSDQKEFLNEIKALTKI-RHRNIVKFY 572 (786)
Q Consensus 499 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~----~~~~~~~~~e~~~l~~l-~hpniv~l~ 572 (786)
+......++|+..+.||+|+||.||+|+.. +|+.||||++........ ....+.+.+|+.+++++ +||||++++
T Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 344445678999999999999999999875 789999999876432211 12245788999999999 799999999
Q ss_pred eEEecCCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEE
Q 047901 573 GFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEAR 652 (786)
Q Consensus 573 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~k 652 (786)
+++...+..++||||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+|
T Consensus 167 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ik 240 (365)
T 2y7j_A 167 DSYESSSFMFLVFDLMRKGELFDYLTEK---VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIR 240 (365)
T ss_dssp EEEEBSSEEEEEECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEE
T ss_pred EEEeeCCEEEEEEEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEE
Confidence 9999999999999999999999999754 5689999999999999999999999 999999999999999999999
Q ss_pred EeccccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhh------cCcCcccchHHHHHHHHHHHhCCCCCCccc
Q 047901 653 VSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYT------MKITEKCDVYSFGVLALEVIKGKHPGDFLS 726 (786)
Q Consensus 653 l~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~------~~~~~~sDvwslGvil~elltg~~Pf~~~~ 726 (786)
|+|||++....... ......||+.|+|| |+..+ ..++.++|||||||++|||++|+.||....
T Consensus 241 l~DfG~~~~~~~~~-~~~~~~gt~~y~aP----------E~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~ 309 (365)
T 2y7j_A 241 LSDFGFSCHLEPGE-KLRELCGTPGYLAP----------EILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR 309 (365)
T ss_dssp ECCCTTCEECCTTC-CBCCCCSCGGGCCH----------HHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred EEecCcccccCCCc-ccccCCCCCCccCh----------hhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCC
Confidence 99999998876432 33456899999999 55542 358899999999999999999999986422
Q ss_pred cccCCCcchhhhhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 727 LFSSSSSSINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.......+.......+...+...+..+.+++..||..||++|||+.|+++
T Consensus 310 --------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 310 --------QILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp --------HHHHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred --------HHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 12222233333333222222233456899999999999999999999986
No 142
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.5e-41 Score=355.94 Aligned_cols=253 Identities=24% Similarity=0.358 Sum_probs=183.6
Q ss_pred ccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhh--cCCCcccceeeEEecCC----
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTK--IRHRNIVKFYGFCSHVR---- 579 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~--l~hpniv~l~~~~~~~~---- 579 (786)
++|++.+.||+|+||+||+|+.. ++.||||++.. .....+.+|.+++.. ++||||+++++++....
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~-------~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 74 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSS-------REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 74 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC--------TTHHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEecc-------cchhhHHHHHHHHHHHhccCcceeeeeeecccCCCccc
Confidence 57999999999999999999875 88999999864 234567788888887 78999999999998766
Q ss_pred eeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHh--------hCCCCCeEEcCCCCCceeeCCCCcE
Q 047901 580 HSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH--------HDCFPPIVHRDISSNNVLLDLEYEA 651 (786)
Q Consensus 580 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivHrdlk~~Nill~~~~~~ 651 (786)
..++||||+++|+|.+++... .+++..+..++.|++.|++||| +. +|+||||||+||+++.++.+
T Consensus 75 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~ 147 (303)
T 3gxj_A 75 QLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTC 147 (303)
T ss_dssp EEEEEEECCTTCCHHHHHHHC----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC
T ss_pred eeEEEEeccCCCCHHHHHhcc----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCE
Confidence 789999999999999999653 5778888999999999999999 77 99999999999999999999
Q ss_pred EEeccccceecCCCCCc----ceeeccCccccCCCCCCCCchHHHHhhhc------CcCcccchHHHHHHHHHHHhC---
Q 047901 652 RVSDFGTAKLLKPNSSN----WTELVGTFGYVAPAHGNIGLHLAELAYTM------KITEKCDVYSFGVLALEVIKG--- 718 (786)
Q Consensus 652 kl~Dfg~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~e~~~~~------~~~~~sDvwslGvil~elltg--- 718 (786)
||+|||+|+........ .....||+.|+|| |...+. .+++++|||||||++|||++|
T Consensus 148 kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~ 217 (303)
T 3gxj_A 148 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP----------EVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSI 217 (303)
T ss_dssp -BCCCCC-CCEETTTTEESCC-----CCGGGCCH----------HHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCB
T ss_pred EEeecCcceeccCCCcccccccCCCCcCccccCH----------hhhcCcccccccccCcchhHHHHHHHHHHHHhcCCC
Confidence 99999999876544322 2334799999999 555544 455789999999999999999
Q ss_pred -------CCCCCccccccCCCcchhhhhhhhccCCCC--CCCh-hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 719 -------KHPGDFLSLFSSSSSSINIEFNAMLDHRLP--HPSL-DVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 719 -------~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
..||........ ........+...... .+.. ...+....+.+++.+||+.||++|||++||++.|
T Consensus 218 ~~~~~~~~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L 292 (303)
T 3gxj_A 218 GGIHEDYQLPYYDLVPSDP---SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTL 292 (303)
T ss_dssp TTBC-CCCCTTTTTCC-CC---CCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHH
T ss_pred ccccceeeccccccCCCCc---cHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHH
Confidence 555543221111 111111222222221 1211 1124556799999999999999999999999864
No 143
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=3.8e-40 Score=345.32 Aligned_cols=252 Identities=23% Similarity=0.413 Sum_probs=208.0
Q ss_pred HhccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeee
Q 047901 504 RTKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSF 582 (786)
Q Consensus 504 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~ 582 (786)
..++|+..+.||+|+||+||+|+.. ++..||+|++.. .....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 85 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-----DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 85 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECS-----CSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCc-----CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEE
Confidence 3567999999999999999999876 578899999864 2235678999999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceec
Q 047901 583 VVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLL 662 (786)
Q Consensus 583 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~ 662 (786)
+||||+++++|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+...
T Consensus 86 ~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~ 161 (288)
T 3kfa_A 86 IITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 161 (288)
T ss_dssp EEEECCTTEEHHHHHHHC-CTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTS
T ss_pred EEEEcCCCCcHHHHHHhc-ccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceec
Confidence 999999999999999865 345689999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCC-cceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCccccccCCCcchhhhhh
Q 047901 663 KPNSS-NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFLSLFSSSSSSINIEFN 740 (786)
Q Consensus 663 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~ 740 (786)
..... ......+|+.|+|| |...+..++.++||||+|+++|+|++ |..||..... .....
T Consensus 162 ~~~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~--------~~~~~ 223 (288)
T 3kfa_A 162 TGDTYTAHAGAKFPIKWTAP----------ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--------SQVYE 223 (288)
T ss_dssp CSSSSEEETTEEECGGGCCH----------HHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--------GGHHH
T ss_pred cCCccccccCCccccCcCCh----------hhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHH
Confidence 54332 22334678899999 78888889999999999999999999 9999874321 11111
Q ss_pred hhccC-CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 741 AMLDH-RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 741 ~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
.+... +...+... +..+.+++..||+.||++|||++|+++.|
T Consensus 224 ~~~~~~~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~~~~~l 266 (288)
T 3kfa_A 224 LLEKDYRMERPEGC----PEKVYELMRACWQWNPSDRPSFAEIHQAF 266 (288)
T ss_dssp HHHTTCCCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHhccCCCCCCCCC----CHHHHHHHHHHhCCChhhCcCHHHHHHHH
Confidence 11111 12222222 33588999999999999999999998864
No 144
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1e-39 Score=344.68 Aligned_cols=259 Identities=22% Similarity=0.363 Sum_probs=203.4
Q ss_pred ccCccceeeccccCceEEEEEc-----CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecC--
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKL-----PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHV-- 578 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~-- 578 (786)
+.|+..+.||+|+||.||+|++ .+++.||||++.... .....+.+.+|+++++.++||||+++++++...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 97 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES---GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGG 97 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC--------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc---cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCC
Confidence 4588999999999999999983 367899999997532 223456789999999999999999999999876
Q ss_pred CeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEecccc
Q 047901 579 RHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGT 658 (786)
Q Consensus 579 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~ 658 (786)
...++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 98 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~ 172 (302)
T 4e5w_A 98 NGIKLIMEFLPSGSLKEYLPKN--KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGL 172 (302)
T ss_dssp CCEEEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTT
T ss_pred ceEEEEEEeCCCCcHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccc
Confidence 6689999999999999999654 35689999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCc---ceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccc------c
Q 047901 659 AKLLKPNSSN---WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLF------S 729 (786)
Q Consensus 659 a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~------~ 729 (786)
++........ .....||..|+|| |...+..++.++||||+|+++|||++|+.|+...... .
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 242 (302)
T 4e5w_A 173 TKAIETDKEYYTVKDDRDSPVFWYAP----------ECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGP 242 (302)
T ss_dssp CEECCTTCCEEECCCCTTCCGGGCCH----------HHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCS
T ss_pred cccccCCCcceeccCCCCCCccccCC----------eeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCC
Confidence 9887654321 2345688899999 8888888999999999999999999999986432110 0
Q ss_pred CCCcchhhhhhhhccC--CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 730 SSSSSINIEFNAMLDH--RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 730 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
................ +...+.. .+..+.+++..||+.||++|||+.|+++.|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~~L 297 (302)
T 4e5w_A 243 THGQMTVTRLVNTLKEGKRLPCPPN----CPDEVYQLMRKCWEFQPSNRTSFQNLIEGF 297 (302)
T ss_dssp CCGGGHHHHHHHHHHTTCCCCCCTT----CCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred cccccCHHHHHHHHhccCCCCCCCC----CCHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence 0011111111222221 1222222 234588999999999999999999999864
No 145
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-39 Score=350.54 Aligned_cols=255 Identities=22% Similarity=0.394 Sum_probs=204.4
Q ss_pred HhccCccceeeccccCceEEEEEc------CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhc-CCCcccceeeEEe
Q 047901 504 RTKDFDAKYCIGKGEHRSVYRAKL------PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGFCS 576 (786)
Q Consensus 504 ~~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~ 576 (786)
..++|+..+.||+|+||+||+|+. .++..||||++.... .....+.+.+|+.+++++ +||||+++++++.
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 119 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA---DSSEREALMSELKMMTQLGSHENIVNLLGACT 119 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC---------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc---CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 356899999999999999999985 245679999997532 223446789999999999 8999999999999
Q ss_pred cCCeeeEEEeccCCCCHHHHhhcCCCC--------------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEc
Q 047901 577 HVRHSFVVYEYINRGSLATVLSNNFAS--------------------EDFDWRKRMNVITGVADALSYMHHDCFPPIVHR 636 (786)
Q Consensus 577 ~~~~~~lv~e~~~~g~L~~~l~~~~~~--------------------~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHr 636 (786)
..+..++||||+++|+|.+++...... ..+++..++.++.|++.||+|||+. +|+||
T Consensus 120 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~ 196 (344)
T 1rjb_A 120 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHR 196 (344)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEET
T ss_pred eCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccC
Confidence 999999999999999999999765321 3479999999999999999999999 99999
Q ss_pred CCCCCceeeCCCCcEEEeccccceecCCCCCc--ceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHH
Q 047901 637 DISSNNVLLDLEYEARVSDFGTAKLLKPNSSN--WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALE 714 (786)
Q Consensus 637 dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~e 714 (786)
||||+||+++.++.+||+|||+++........ .....||+.|+|| |...+..++.++|||||||++||
T Consensus 197 Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aP----------E~~~~~~~~~~~Di~slG~il~e 266 (344)
T 1rjb_A 197 DLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAP----------ESLFEGIYTIKSDVWSYGILLWE 266 (344)
T ss_dssp TCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCH----------HHHHHCCCCHHHHHHHHHHHHHH
T ss_pred CCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCH----------HHhccCCCChhHhHHHHHHHHHH
Confidence 99999999999999999999999876543322 2345678899999 78888889999999999999999
Q ss_pred HHh-CCCCCCccccccCCCcchhhhhhhhccCC--CCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 715 VIK-GKHPGDFLSLFSSSSSSINIEFNAMLDHR--LPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 715 llt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
|+| |..||..... .......+... ...+... +..+.+++..||+.||.+|||+.|+++.|
T Consensus 267 l~t~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~l 329 (344)
T 1rjb_A 267 IFSLGVNPYPGIPV--------DANFYKLIQNGFKMDQPFYA----TEEIYIIMQSCWAFDSRKRPSFPNLTSFL 329 (344)
T ss_dssp HTTTSCCSSTTCCC--------SHHHHHHHHTTCCCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHcCCCCCcccCCc--------HHHHHHHHhcCCCCCCCCCC----CHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence 998 9999875321 11122222222 1222222 33588999999999999999999998864
No 146
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2.3e-39 Score=346.92 Aligned_cols=254 Identities=23% Similarity=0.399 Sum_probs=205.3
Q ss_pred hccCccceeeccccCceEEEEEcC--------CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhc-CCCcccceeeEE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP--------SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGFC 575 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~ 575 (786)
.++|++.+.||+|+||+||+|+.. ++..||||++... ......+.+.+|+++++++ +||||+++++++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 110 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD---ATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 110 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTT---CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccC---CcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEE
Confidence 468999999999999999999853 4678999999752 2334567899999999999 899999999999
Q ss_pred ecCCeeeEEEeccCCCCHHHHhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCc
Q 047901 576 SHVRHSFVVYEYINRGSLATVLSNNFA-------------SEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNN 642 (786)
Q Consensus 576 ~~~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~N 642 (786)
...+..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||+|
T Consensus 111 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~N 187 (334)
T 2pvf_A 111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARN 187 (334)
T ss_dssp CSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred ccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccce
Confidence 999999999999999999999986532 23489999999999999999999999 99999999999
Q ss_pred eeeCCCCcEEEeccccceecCCCCCc--ceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CC
Q 047901 643 VLLDLEYEARVSDFGTAKLLKPNSSN--WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GK 719 (786)
Q Consensus 643 ill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~ 719 (786)
|+++.++.+||+|||+++........ .....+|+.|+|| |...+..++.++||||||+++|||++ |+
T Consensus 188 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~il~ellt~g~ 257 (334)
T 2pvf_A 188 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP----------EALFDRVYTHQSDVWSFGVLMWEIFTLGG 257 (334)
T ss_dssp EEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCH----------HHHHHCEECHHHHHHHHHHHHHHHHTTSC
T ss_pred EEEcCCCCEEEccccccccccccccccccCCCCcccceeCh----------HHhcCCCcChHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999877643321 2234578899999 77788889999999999999999999 99
Q ss_pred CCCCccccccCCCcchhhhhhhhccC-CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 720 HPGDFLSLFSSSSSSINIEFNAMLDH-RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 720 ~Pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
.||..... ......+... +...+.. .+..+.+++..||+.||++|||+.|+++.|
T Consensus 258 ~p~~~~~~--------~~~~~~~~~~~~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~ell~~L 313 (334)
T 2pvf_A 258 SPYPGIPV--------EELFKLLKEGHRMDKPAN----CTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313 (334)
T ss_dssp CSSTTCCH--------HHHHHHHHHTCCCCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCcCcCCH--------HHHHHHHhcCCCCCCCcc----CCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 99864321 1111222221 1222222 223588999999999999999999999764
No 147
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=7e-40 Score=359.06 Aligned_cols=260 Identities=21% Similarity=0.303 Sum_probs=206.4
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCC--ee
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVR--HS 581 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~--~~ 581 (786)
.++|.+.+.||+|+||+||+|+.. +++.||||++... ......+.+.+|++++++++||||+++++++...+ ..
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 84 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNI---SFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHK 84 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGG---GGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccc---cccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCee
Confidence 357999999999999999999865 5899999998642 22234567889999999999999999999997654 77
Q ss_pred eEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceee----CCCCcEEEeccc
Q 047901 582 FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLL----DLEYEARVSDFG 657 (786)
Q Consensus 582 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill----~~~~~~kl~Dfg 657 (786)
++||||+++|+|.+++........+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||
T Consensus 85 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG 161 (396)
T 4eut_A 85 VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (396)
T ss_dssp EEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGG
T ss_pred EEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCC
Confidence 99999999999999998654444599999999999999999999999 99999999999999 778889999999
Q ss_pred cceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhh--------cCcCcccchHHHHHHHHHHHhCCCCCCcccccc
Q 047901 658 TAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYT--------MKITEKCDVYSFGVLALEVIKGKHPGDFLSLFS 729 (786)
Q Consensus 658 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~--------~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~ 729 (786)
+|+...... ......||+.|+|| |+... ..++.++|||||||++|||++|+.||.......
T Consensus 162 ~a~~~~~~~-~~~~~~gt~~y~aP----------E~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~ 230 (396)
T 4eut_A 162 AARELEDDE-QFVSLYGTEEYLHP----------DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR 230 (396)
T ss_dssp GCEECCCGG-GSSCSSSCCTTCCH----------HHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTT
T ss_pred CceEccCCC-ccccccCCccccCH----------HHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCccc
Confidence 998875432 23345799999999 55543 567889999999999999999999986432111
Q ss_pred CCCcchhhhhhhhccC---------------------CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHh
Q 047901 730 SSSSSINIEFNAMLDH---------------------RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQL 785 (786)
Q Consensus 730 ~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 785 (786)
.....+..+... ..+.+..........+.+++..||..||++|||++|+++.
T Consensus 231 ----~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~ 303 (396)
T 4eut_A 231 ----RNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE 303 (396)
T ss_dssp ----TCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHH
T ss_pred ----chHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHH
Confidence 111111111111 1111222235566778999999999999999999999875
No 148
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=7.7e-40 Score=358.44 Aligned_cols=251 Identities=21% Similarity=0.279 Sum_probs=191.8
Q ss_pred ccCccc-eeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhh-cCCCcccceeeEEec----C
Q 047901 506 KDFDAK-YCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTK-IRHRNIVKFYGFCSH----V 578 (786)
Q Consensus 506 ~~~~~~-~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~-l~hpniv~l~~~~~~----~ 578 (786)
++|... +.||+|+||+||+|+.. +++.||||++.. ...+.+|++++.+ .+||||+++++++.. .
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~---------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~ 131 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD---------CPKARREVELHWRASQCPHIVRIVDVYENLYAGR 131 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC---------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc---------chhHHHHHHHHHHhcCCCCcceEeEEEeecccCC
Confidence 457665 68999999999999865 688999999853 1356688888754 489999999998865 5
Q ss_pred CeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCC---CCcEEEec
Q 047901 579 RHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDL---EYEARVSD 655 (786)
Q Consensus 579 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~---~~~~kl~D 655 (786)
...|+||||+++|+|.+++... ....+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|
T Consensus 132 ~~~~lv~E~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~D 207 (400)
T 1nxk_A 132 KCLLIVMECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTD 207 (400)
T ss_dssp EEEEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECC
T ss_pred cEEEEEEEeCCCCcHHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEe
Confidence 6789999999999999999864 234689999999999999999999999 9999999999999998 78999999
Q ss_pred cccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcch
Q 047901 656 FGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSI 735 (786)
Q Consensus 656 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~ 735 (786)
||+++..... ......+||+.|+|| |++.+..++.++|||||||++|||++|+.||..........
T Consensus 208 FG~a~~~~~~-~~~~~~~gt~~y~aP----------E~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~--- 273 (400)
T 1nxk_A 208 FGFAKETTSH-NSLTTPCYTPYYVAP----------EVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP--- 273 (400)
T ss_dssp CTTCEECC------------CTTCCG----------GGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCC---
T ss_pred cccccccCCC-CccccCCCCCCccCH----------hhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccH---
Confidence 9999876533 223456899999999 66667789999999999999999999999997543221111
Q ss_pred hhhhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 736 NIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.....+.......+...+...+..+.+++..||..||++|||+.|+++
T Consensus 274 -~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (400)
T 1nxk_A 274 -GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 321 (400)
T ss_dssp -SHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -HHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111222222222222222233456899999999999999999999986
No 149
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.1e-40 Score=367.18 Aligned_cols=261 Identities=21% Similarity=0.297 Sum_probs=206.2
Q ss_pred HHHHHHhccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEec
Q 047901 499 EEIIRRTKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSH 577 (786)
Q Consensus 499 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~ 577 (786)
.++....++|+..+.||+|+||+||+|+.+ +++.||||++..... ........+.+|+.++..++||||+++++++.+
T Consensus 67 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEM-LKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHH-HHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHh-hhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 334445678999999999999999999876 578899999853100 011122347899999999999999999999999
Q ss_pred CCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccc
Q 047901 578 VRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFG 657 (786)
Q Consensus 578 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg 657 (786)
.+..|+||||+++|+|.+++... .+.+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~--~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFG 220 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKF--EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFG 220 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEecCCCCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchh
Confidence 99999999999999999999763 35689999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCc-ceeeccCccccCCCCCCCCchHHHHhh-----hcCcCcccchHHHHHHHHHHHhCCCCCCccccccCC
Q 047901 658 TAKLLKPNSSN-WTELVGTFGYVAPAHGNIGLHLAELAY-----TMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSS 731 (786)
Q Consensus 658 ~a~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~e~~~-----~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~ 731 (786)
+|+........ ....+||+.|+|| |++. ...++.++|||||||++|||++|+.||....
T Consensus 221 la~~~~~~~~~~~~~~~GT~~Y~AP----------E~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~----- 285 (437)
T 4aw2_A 221 SCLKLMEDGTVQSSVAVGTPDYISP----------EILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES----- 285 (437)
T ss_dssp TCEECCTTSCEECCSCCSCGGGCCH----------HHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSS-----
T ss_pred hhhhcccCCCcccccccCCcCeeCh----------HHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCC-----
Confidence 99877544332 2346899999999 6665 4568999999999999999999999987432
Q ss_pred CcchhhhhhhhccC--CCCCCChhHHHHHHHHHHHHHhccCCCCCC--CCCHHHHHH
Q 047901 732 SSSINIEFNAMLDH--RLPHPSLDVQEKLISIMEVALLCLDGCPNS--RPTMQTVCQ 784 (786)
Q Consensus 732 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~~p~~--RPt~~ev~~ 784 (786)
.......+... +...|.. ....+..+.+++.+|+..+|++ ||+++|+++
T Consensus 286 ---~~~~~~~i~~~~~~~~~p~~-~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 286 ---LVETYGKIMNHKERFQFPTQ-VTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp ---HHHHHHHHHTHHHHCCCCSS-CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred ---hhHHHHhhhhccccccCCcc-cccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 12222222221 1222221 0112335889999999988888 999999875
No 150
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=3.4e-40 Score=353.37 Aligned_cols=255 Identities=26% Similarity=0.450 Sum_probs=205.4
Q ss_pred HhccCccceeeccccCceEEEEEcCC-C-----CEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhc-CCCcccceeeEEe
Q 047901 504 RTKDFDAKYCIGKGEHRSVYRAKLPS-G-----DKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGFCS 576 (786)
Q Consensus 504 ~~~~~~~~~~ig~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~ 576 (786)
..++|+..+.||+|+||+||+|.... + ..||+|++... ......+.+.+|+.+++.+ +||||+++++++.
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 120 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST---AHADEKEALMSELKIMSHLGQHENIVNLLGACT 120 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTT---CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccc---cChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 35689999999999999999998542 2 47999999752 2334567899999999999 8999999999999
Q ss_pred cCCeeeEEEeccCCCCHHHHhhcCC-----------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceee
Q 047901 577 HVRHSFVVYEYINRGSLATVLSNNF-----------ASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLL 645 (786)
Q Consensus 577 ~~~~~~lv~e~~~~g~L~~~l~~~~-----------~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill 645 (786)
..+..++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||++
T Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~ 197 (333)
T 2i1m_A 121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLL 197 (333)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEE
T ss_pred cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEE
Confidence 9999999999999999999997531 134579999999999999999999999 99999999999999
Q ss_pred CCCCcEEEeccccceecCCCCCc--ceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCC
Q 047901 646 DLEYEARVSDFGTAKLLKPNSSN--WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPG 722 (786)
Q Consensus 646 ~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf 722 (786)
+.++.+||+|||+++........ .....+|+.|+|| |...+..++.++|||||||++|||+| |..||
T Consensus 198 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 267 (333)
T 2i1m_A 198 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAP----------ESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267 (333)
T ss_dssp EGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCH----------HHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred CCCCeEEECccccccccccccceeecCCCCCCccccCH----------HHhccCCCChHHHHHHHHHHHHHHHcCCCCCC
Confidence 99999999999999876543221 2334678899999 77888889999999999999999998 99998
Q ss_pred CccccccCCCcchhhhhhhhccCC--CCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 723 DFLSLFSSSSSSINIEFNAMLDHR--LPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
..... ........... ...+... +..+.+++..||+.||.+|||+.|+++.|
T Consensus 268 ~~~~~--------~~~~~~~~~~~~~~~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~l~~~L 321 (333)
T 2i1m_A 268 PGILV--------NSKFYKLVKDGYQMAQPAFA----PKNIYSIMQACWALEPTHRPTFQQICSFL 321 (333)
T ss_dssp TTCCS--------SHHHHHHHHHTCCCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred cccch--------hHHHHHHHhcCCCCCCCCCC----CHHHHHHHHHHhccChhhCcCHHHHHHHH
Confidence 74321 11112222211 1122222 23588999999999999999999998864
No 151
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.2e-39 Score=337.45 Aligned_cols=250 Identities=24% Similarity=0.403 Sum_probs=206.0
Q ss_pred hccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeEE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVV 584 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 584 (786)
.++|+..+.||+|+||.||+|+..+++.||+|++.... ...+.+.+|+++++.++||||+++++++...+..++|
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-----MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 81 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-----BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC-----CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEE
Confidence 45799999999999999999998888899999997522 2346789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecCC
Q 047901 585 YEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKP 664 (786)
Q Consensus 585 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 664 (786)
|||+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.++....
T Consensus 82 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 156 (267)
T 3t9t_A 82 TEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 156 (267)
T ss_dssp ECCCTTCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred EeCCCCCcHHHHHhhC--cccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccc
Confidence 9999999999999764 35689999999999999999999999 999999999999999999999999999986643
Q ss_pred CCC-cceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCccccccCCCcchhhhhhhh
Q 047901 665 NSS-NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFLSLFSSSSSSINIEFNAM 742 (786)
Q Consensus 665 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~ 742 (786)
... ......++..|+|| |...+..++.++||||+|+++|||++ |+.||.... .......+
T Consensus 157 ~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--------~~~~~~~i 218 (267)
T 3t9t_A 157 DQYTSSTGTKFPVKWASP----------EVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS--------NSEVVEDI 218 (267)
T ss_dssp HHHHSTTSTTCCGGGCCH----------HHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--------HHHHHHHH
T ss_pred ccccccccccccccccCh----------hhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCC--------HHHHHHHH
Confidence 211 11234577899999 78888889999999999999999999 899987432 11222222
Q ss_pred ccC-CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 743 LDH-RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 743 ~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
... +...+... +..+.+++..||+.||++|||+.|+++.|
T Consensus 219 ~~~~~~~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~ll~~L 259 (267)
T 3t9t_A 219 STGFRLYKPRLA----STHVYQIMNHCWRERPEDRPAFSRLLRQL 259 (267)
T ss_dssp HTTCCCCCCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred hcCCcCCCCccC----cHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 222 11222222 23588999999999999999999999864
No 152
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.9e-39 Score=344.41 Aligned_cols=254 Identities=23% Similarity=0.416 Sum_probs=207.1
Q ss_pred hccCccceeeccccCceEEEEEc------CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhc-CCCcccceeeEEec
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKL------PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGFCSH 577 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~ 577 (786)
.++|+..+.||+|+||+||+|+. .+++.||||++... ......+.+.+|+++++++ +||||+++++++..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 98 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS---AHLTEREALMSELKVLSYLGNHMNIVNLLGACTI 98 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT---CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcc---hhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec
Confidence 46799999999999999999974 35678999999752 2334567899999999999 89999999999999
Q ss_pred CCeeeEEEeccCCCCHHHHhhcCCC---------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCc
Q 047901 578 VRHSFVVYEYINRGSLATVLSNNFA---------------SEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNN 642 (786)
Q Consensus 578 ~~~~~lv~e~~~~g~L~~~l~~~~~---------------~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~N 642 (786)
.+..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||+|
T Consensus 99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~N 175 (313)
T 1t46_A 99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARN 175 (313)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGG
T ss_pred CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccce
Confidence 9999999999999999999976532 12589999999999999999999999 99999999999
Q ss_pred eeeCCCCcEEEeccccceecCCCCCc--ceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CC
Q 047901 643 VLLDLEYEARVSDFGTAKLLKPNSSN--WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GK 719 (786)
Q Consensus 643 ill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~ 719 (786)
|+++.++.+||+|||+++........ .....+|+.|+|| |...+..++.++||||||+++|||+| |+
T Consensus 176 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~il~ellt~g~ 245 (313)
T 1t46_A 176 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAP----------ESIFNCVYTFESDVWSYGIFLWELFSLGS 245 (313)
T ss_dssp EEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCH----------HHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred EEEcCCCCEEEccccccccccccccceeccCCCCcceeeCh----------HHhcCCCCChHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999877654332 2234678899999 77888889999999999999999999 99
Q ss_pred CCCCccccccCCCcchhhhhhhhccCCC--CCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 720 HPGDFLSLFSSSSSSINIEFNAMLDHRL--PHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 720 ~Pf~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
.||..... .......+.... ..+.. .+..+.+++..||+.||++|||+.|+++.|
T Consensus 246 ~p~~~~~~--------~~~~~~~~~~~~~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~ell~~L 302 (313)
T 1t46_A 246 SPYPGMPV--------DSKFYKMIKEGFRMLSPEH----APAEMYDIMKTCWDADPLKRPTFKQIVQLI 302 (313)
T ss_dssp CSSTTCCS--------SHHHHHHHHHTCCCCCCTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCcccc--------hhHHHHHhccCCCCCCccc----CCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence 99875321 111122222111 11221 233588999999999999999999999864
No 153
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.1e-39 Score=348.37 Aligned_cols=249 Identities=23% Similarity=0.352 Sum_probs=198.0
Q ss_pred hccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCC--CcccceeeEEecCCeee
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH--RNIVKFYGFCSHVRHSF 582 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h--pniv~l~~~~~~~~~~~ 582 (786)
.++|++.+.||+|+||+||+|...+++.||||++.... ......+.+.+|+++++.++| |||+++++++...+..+
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~ 85 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE--ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 85 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTT--CCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccc--cchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEE
Confidence 35699999999999999999998889999999987532 233456789999999999976 99999999999999999
Q ss_pred EEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceec
Q 047901 583 VVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLL 662 (786)
Q Consensus 583 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~ 662 (786)
+||| +.+|+|.+++... +.+++..+..++.|++.||+|||+. +|+||||||+|||++ ++.+||+|||+|+..
T Consensus 86 lv~e-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~ 157 (343)
T 3dbq_A 86 MVME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQM 157 (343)
T ss_dssp EEEC-CCSEEHHHHHHHS---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC
T ss_pred EEEe-CCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeeccccccc
Confidence 9999 5678999999864 5689999999999999999999999 999999999999997 688999999999877
Q ss_pred CCCCC--cceeeccCccccCCCCCCCCchHHHHhhh-----------cCcCcccchHHHHHHHHHHHhCCCCCCcccccc
Q 047901 663 KPNSS--NWTELVGTFGYVAPAHGNIGLHLAELAYT-----------MKITEKCDVYSFGVLALEVIKGKHPGDFLSLFS 729 (786)
Q Consensus 663 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~e~~~~-----------~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~ 729 (786)
..... ......||+.|+|| |++.+ ..++.++|||||||++|||++|+.||....
T Consensus 158 ~~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--- 224 (343)
T 3dbq_A 158 QPDTTSVVKDSQVGTVNYMPP----------EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII--- 224 (343)
T ss_dssp ------------CCCCSSCCH----------HHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC---
T ss_pred CcccccccCCCCcCCcCcCCH----------HHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh---
Confidence 54332 22356799999999 55543 678899999999999999999999986421
Q ss_pred CCCcchhhhhhhhccCCC--CCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 730 SSSSSINIEFNAMLDHRL--PHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.........++... ..+.... ..+.+++..||..||++|||+.|+++
T Consensus 225 ----~~~~~~~~~~~~~~~~~~~~~~~----~~l~~li~~~L~~dp~~Rpt~~e~l~ 273 (343)
T 3dbq_A 225 ----NQISKLHAIIDPNHEIEFPDIPE----KDLQDVLKCCLKRDPKQRISIPELLA 273 (343)
T ss_dssp ----SHHHHHHHHHCTTSCCCCCCCSC----HHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ----hHHHHHHHHhcCCcccCCcccCC----HHHHHHHHHHcCCChhHCCCHHHHHh
Confidence 11122333333222 2222222 34889999999999999999999985
No 154
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.9e-39 Score=336.64 Aligned_cols=248 Identities=19% Similarity=0.273 Sum_probs=201.2
Q ss_pred hccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecC--Ceee
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHV--RHSF 582 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~--~~~~ 582 (786)
.++|+..+.||+|+||+||+|+.+ ++.||||++.... ......+.+.+|+.++++++||||+++++++... +..+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 85 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRD--WSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPT 85 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTT--CCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccc--cCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeE
Confidence 357999999999999999999985 8899999997632 2334567899999999999999999999999876 7889
Q ss_pred EEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEEcCCCCCceeeCCCCcEEEeccccce
Q 047901 583 VVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPP--IVHRDISSNNVLLDLEYEARVSDFGTAK 660 (786)
Q Consensus 583 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~--ivHrdlk~~Nill~~~~~~kl~Dfg~a~ 660 (786)
+||||+++|+|.+++... ....+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||++.
T Consensus 86 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~ 161 (271)
T 3kmu_A 86 LITHWMPYGSLYNVLHEG-TNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKF 161 (271)
T ss_dssp EEEECCTTCBHHHHHHSC-SSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCC
T ss_pred eeecccCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEecccee
Confidence 999999999999999865 234689999999999999999999998 7 9999999999999999999999999876
Q ss_pred ecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcC---cccchHHHHHHHHHHHhCCCCCCccccccCCCcchhh
Q 047901 661 LLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKIT---EKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINI 737 (786)
Q Consensus 661 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~---~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~ 737 (786)
..... ...||+.|+|| |...+..++ .++||||||+++|||++|+.||..... ..
T Consensus 162 ~~~~~-----~~~~t~~y~aP----------E~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--------~~ 218 (271)
T 3kmu_A 162 SFQSP-----GRMYAPAWVAP----------EALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN--------ME 218 (271)
T ss_dssp TTSCT-----TCBSCGGGSCH----------HHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH--------HH
T ss_pred eeccc-----CccCCccccCh----------hhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh--------HH
Confidence 54322 34789999999 666654444 389999999999999999999874321 11
Q ss_pred hhhhhccC--CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 738 EFNAMLDH--RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 738 ~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
........ +...+.. .+..+.+++..||+.||++|||++|+++.|
T Consensus 219 ~~~~~~~~~~~~~~~~~----~~~~~~~li~~~l~~~p~~Rps~~~il~~L 265 (271)
T 3kmu_A 219 IGMKVALEGLRPTIPPG----ISPHVSKLMKICMNEDPAKRPKFDMIVPIL 265 (271)
T ss_dssp HHHHHHHSCCCCCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCCC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 11222221 1222222 233589999999999999999999999864
No 155
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-39 Score=353.61 Aligned_cols=251 Identities=27% Similarity=0.403 Sum_probs=191.5
Q ss_pred ccCccceeeccccCceEEEEEcC--CC--CEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEe-cCCe
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKLP--SG--DKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCS-HVRH 580 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~-~~~~ 580 (786)
..|+..+.||+|+||+||+|++. ++ ..||||.+... ......+.|.+|+.++++++||||+++++++. .++.
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~ 165 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS 165 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC---SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSC
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC---CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCC
Confidence 35777889999999999999853 22 36899998642 33455678999999999999999999999875 4567
Q ss_pred eeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccce
Q 047901 581 SFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAK 660 (786)
Q Consensus 581 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~ 660 (786)
.++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 166 ~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~ 240 (373)
T 3c1x_A 166 PLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 240 (373)
T ss_dssp CEEEEECCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC----
T ss_pred eEEEEECCCCCCHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccc
Confidence 89999999999999999754 35688999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCC----cceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCccccccCCCcch
Q 047901 661 LLKPNSS----NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFLSLFSSSSSSI 735 (786)
Q Consensus 661 ~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~~~~~~~~~~~ 735 (786)
....... ......+|+.|+|| |...+..++.++|||||||++|||+| |.+||......
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~------- 303 (373)
T 3c1x_A 241 DMYDKEFDSVHNKTGAKLPVKWMAL----------ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF------- 303 (373)
T ss_dssp -----------------CCGGGSCH----------HHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS-------
T ss_pred cccccccccccccCCCCCcccccCh----------HHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH-------
Confidence 7643321 12334678899999 88888899999999999999999999 67787643211
Q ss_pred hhhhhhhccC-CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 736 NIEFNAMLDH-RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 736 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
.....+... +...|... +..+.+++..||+.||++|||+.|+++.|
T Consensus 304 -~~~~~~~~~~~~~~p~~~----~~~l~~li~~cl~~dp~~RPs~~ell~~L 350 (373)
T 3c1x_A 304 -DITVYLLQGRRLLQPEYC----PDPLYEVMLKCWHPKAEMRPSFSELVSRI 350 (373)
T ss_dssp -CHHHHHHTTCCCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred -HHHHHHHcCCCCCCCCCC----CHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 111112222 22223222 23588999999999999999999999864
No 156
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.2e-39 Score=366.89 Aligned_cols=256 Identities=22% Similarity=0.232 Sum_probs=207.9
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|+..+.||+|+||.||+|+.+ +++.||||++..... ........+.+|+++++.++||||+++++++.+.+..|+
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~-~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRI-KKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhh-hhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 457999999999999999999865 789999999854110 112234568899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecC
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK 663 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 663 (786)
||||+++|+|.+++... ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|+...
T Consensus 262 VmEy~~gg~L~~~l~~~-~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~ 337 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHM-GQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVP 337 (576)
T ss_dssp EECCCCSCBHHHHHHSS-SSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEcCCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecc
Confidence 99999999999999765 234589999999999999999999999 99999999999999999999999999998875
Q ss_pred CCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhhc
Q 047901 664 PNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAML 743 (786)
Q Consensus 664 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 743 (786)
... .....+||+.|+|| |++.+..++.++|||||||++|||++|+.||..... ..........+.
T Consensus 338 ~~~-~~~~~~GT~~Y~AP----------Evl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~----~~~~~~i~~~i~ 402 (576)
T 2acx_A 338 EGQ-TIKGRVGTVGYMAP----------EVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKK----KIKREEVERLVK 402 (576)
T ss_dssp TTC-CEECCCSCGGGCCH----------HHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSS----CCCHHHHHHHHH
T ss_pred cCc-cccccCCCccccCH----------HHHcCCCCCccchHHHHHHHHHHHHhCCCCCccccc----chhHHHHHHHhh
Confidence 432 23446899999999 788888899999999999999999999999875321 011111222222
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 047901 744 DHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRP-----TMQTVCQ 784 (786)
Q Consensus 744 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RP-----t~~ev~~ 784 (786)
......+... +..+.+++..||.+||++|| +++|+++
T Consensus 403 ~~~~~~p~~~----s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 403 EVPEEYSERF----SPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp HCCCCCCTTS----CHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred cccccCCccC----CHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 2233333222 33588999999999999999 7888875
No 157
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.3e-39 Score=345.42 Aligned_cols=258 Identities=24% Similarity=0.358 Sum_probs=197.0
Q ss_pred HHhccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhc--CCCcccceeeEEecC--
Q 047901 503 RRTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI--RHRNIVKFYGFCSHV-- 578 (786)
Q Consensus 503 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l--~hpniv~l~~~~~~~-- 578 (786)
...++|++.+.||+|+||+||+|+.. ++.||||++.. .....+..|.+++... +||||+++++++...
T Consensus 34 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~-------~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~ 105 (337)
T 3mdy_A 34 TIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFT-------TEEASWFRETEIYQTVLMRHENILGFIAADIKGTG 105 (337)
T ss_dssp THHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEG-------GGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG
T ss_pred ccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEec-------cccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCC
Confidence 34568999999999999999999885 88999999853 2334556667766655 899999999999876
Q ss_pred --CeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC-----CCCeEEcCCCCCceeeCCCCcE
Q 047901 579 --RHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDC-----FPPIVHRDISSNNVLLDLEYEA 651 (786)
Q Consensus 579 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivHrdlk~~Nill~~~~~~ 651 (786)
...++||||+++|+|.+++... .+++..+..++.|++.||+|||+.. .++|+||||||+||+++.++.+
T Consensus 106 ~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 181 (337)
T 3mdy_A 106 SWTQLYLITDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTC 181 (337)
T ss_dssp GGCEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCE
T ss_pred CCCceEEEEeccCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCE
Confidence 6889999999999999999753 5899999999999999999999762 3489999999999999999999
Q ss_pred EEeccccceecCCCCCc----ceeeccCccccCCCCCCCCchHHHHhhhcCcCcc------cchHHHHHHHHHHHhC---
Q 047901 652 RVSDFGTAKLLKPNSSN----WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEK------CDVYSFGVLALEVIKG--- 718 (786)
Q Consensus 652 kl~Dfg~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~------sDvwslGvil~elltg--- 718 (786)
||+|||+|+........ .....||+.|+|| |...+..++.+ +|||||||++|||+||
T Consensus 182 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~ 251 (337)
T 3mdy_A 182 CIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPP----------EVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVS 251 (337)
T ss_dssp EECCCTTCEECC---------CCSSCSCGGGCCH----------HHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCB
T ss_pred EEEeCCCceeeccccccccCCCCCCccCcceeCh----------hhcccccCCccccCccccchHHHHHHHHHHHhccCc
Confidence 99999999876543322 1245799999999 66666555554 9999999999999999
Q ss_pred -------CCCCCccccccCCCcchhhhhhhhccC-C--CCCCCh-hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 719 -------KHPGDFLSLFSSSSSSINIEFNAMLDH-R--LPHPSL-DVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 719 -------~~Pf~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~-~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
+.||...... ............. . ...+.. ...+++..+.+++..||+.||++|||+.||++.|
T Consensus 252 ~~~~~~~~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L 326 (337)
T 3mdy_A 252 GGIVEEYQLPYHDLVPS----DPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTL 326 (337)
T ss_dssp TTBCCCCCCTTTTTSCS----SCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred ccccccccccHhhhcCC----CCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHH
Confidence 4454322111 1111122222211 1 112211 1235567799999999999999999999999864
No 158
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=5.4e-39 Score=337.82 Aligned_cols=252 Identities=24% Similarity=0.341 Sum_probs=198.5
Q ss_pred cCccceeeccccCceEEEEEc-CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeEEE
Q 047901 507 DFDAKYCIGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVY 585 (786)
Q Consensus 507 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 585 (786)
+|.....||+|+||+||+|+. .+++.||||++... .....+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 98 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER----DSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFM 98 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECC----CC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCC----chHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEE
Confidence 355566899999999999985 46889999998752 2234567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCC-CCcEEEeccccceecCC
Q 047901 586 EYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDL-EYEARVSDFGTAKLLKP 664 (786)
Q Consensus 586 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~-~~~~kl~Dfg~a~~~~~ 664 (786)
||+++++|.+++........+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||.++....
T Consensus 99 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~ 175 (295)
T 2clq_A 99 EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 175 (295)
T ss_dssp ECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC
T ss_pred EeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCC
Confidence 9999999999998764445678999999999999999999999 9999999999999987 89999999999988764
Q ss_pred CCCcceeeccCccccCCCCCCCCchHHHHhhhc--CcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhh
Q 047901 665 NSSNWTELVGTFGYVAPAHGNIGLHLAELAYTM--KITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAM 742 (786)
Q Consensus 665 ~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~--~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 742 (786)
.........||+.|+|| |...+. .++.++||||||+++|||++|+.||..... ..........
T Consensus 176 ~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~~~~~ 240 (295)
T 2clq_A 176 INPCTETFTGTLQYMAP----------EIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGE-----PQAAMFKVGM 240 (295)
T ss_dssp -----CCCCCCGGGCCH----------HHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSS-----HHHHHHHHHH
T ss_pred CCCcccccCCCccccCh----------hhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCc-----hhHHHHhhcc
Confidence 43334456799999999 666553 378999999999999999999999864221 0000011111
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 743 LDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.......+... +..+.+++.+||+.||++|||++|+++
T Consensus 241 ~~~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 241 FKVHPEIPESM----SAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp HCCCCCCCTTS----CHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ccccccccccC----CHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11122222222 235889999999999999999999985
No 159
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.8e-39 Score=343.66 Aligned_cols=256 Identities=24% Similarity=0.320 Sum_probs=197.8
Q ss_pred hccCccceeeccccCceEEEEEc-CCCCEEEEEEcCCCCCC-CchhhHHHHHHHHHHHhhc---CCCcccceeeEEecCC
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPN-DQMSDQKEFLNEIKALTKI---RHRNIVKFYGFCSHVR 579 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~~~e~~~l~~l---~hpniv~l~~~~~~~~ 579 (786)
.++|++.+.||+|+||+||+|+. .+++.||||++...... ........+.+|+++++.+ +||||+++++++....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~ 87 (308)
T 3g33_A 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR 87 (308)
T ss_dssp --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC
Confidence 56899999999999999999986 47889999998643211 1112234566777777766 4999999999997654
Q ss_pred -----eeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEe
Q 047901 580 -----HSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVS 654 (786)
Q Consensus 580 -----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~ 654 (786)
..++||||++ |+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 88 TDREIKVTLVFEHVD-QDLRTYLDKA-PPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp SSSEEEEEEEEECCC-CBHHHHHHTC-CTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCceeEEEEehhhh-cCHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEe
Confidence 5789999997 5999999865 234589999999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcc
Q 047901 655 DFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSS 734 (786)
Q Consensus 655 Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~ 734 (786)
|||+|+..... .......||+.|+|| |...+..++.++||||+||++|||++|+.||......
T Consensus 163 Dfg~a~~~~~~-~~~~~~~gt~~y~aP----------E~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~------ 225 (308)
T 3g33_A 163 DFGLARIYSYQ-MALTPVVVTLWYRAP----------EVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA------ 225 (308)
T ss_dssp SCSCTTTSTTC-CCSGGGGCCCSSCCH----------HHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHH------
T ss_pred eCccccccCCC-cccCCccccccccCc----------hHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH------
Confidence 99999866533 233456899999999 7888888999999999999999999999998753321
Q ss_pred hhhhhhhhcc----------------------CCCCCC-ChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 735 INIEFNAMLD----------------------HRLPHP-SLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 735 ~~~~~~~~~~----------------------~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.....+.+ .....+ .....+....+.+++.+||+.||++|||+.|+++
T Consensus 226 --~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 226 --DQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp --HHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred --HHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 01111100 000000 0000112346889999999999999999999986
No 160
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=2.4e-39 Score=347.82 Aligned_cols=247 Identities=25% Similarity=0.406 Sum_probs=200.6
Q ss_pred ccCccceeeccccCceEEEEEc-CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeEE
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVV 584 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 584 (786)
+.|+..+.||+|+||+||+|+. .+++.||||++..... ......+.+.+|+++++.++||||+++++++...+..++|
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK-QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSS-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccc-cchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 4589999999999999999985 5788999999875321 2334456889999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecCC
Q 047901 585 YEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKP 664 (786)
Q Consensus 585 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 664 (786)
|||++ |++.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 133 ~e~~~-g~l~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp EECCS-EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred EecCC-CCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence 99997 5888888643 35689999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCcceeeccCccccCCCCCCCCchHHHHhh---hcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhh
Q 047901 665 NSSNWTELVGTFGYVAPAHGNIGLHLAELAY---TMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNA 741 (786)
Q Consensus 665 ~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~---~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 741 (786)
. ....||+.|+|| |... ...++.++|||||||++|||++|+.||..... ......
T Consensus 207 ~----~~~~gt~~y~aP----------E~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~--------~~~~~~ 264 (348)
T 1u5q_A 207 A----NSFVGTPYWMAP----------EVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--------MSALYH 264 (348)
T ss_dssp B----CCCCSCGGGCCH----------HHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHHHH
T ss_pred C----CcccCCcceeCH----------hhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh--------HHHHHH
Confidence 2 345799999999 6653 46789999999999999999999999864321 111122
Q ss_pred hccCCCC-CCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 742 MLDHRLP-HPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 742 ~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
+.....+ ... ...+..+.+++..||+.||++|||++++++
T Consensus 265 ~~~~~~~~~~~---~~~~~~l~~li~~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 265 IAQNESPALQS---GHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp HHHSCCCCCCC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHhcCCCCCCC---CCCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 2222111 111 112335889999999999999999999975
No 161
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.6e-40 Score=361.64 Aligned_cols=260 Identities=24% Similarity=0.270 Sum_probs=205.1
Q ss_pred HHHHHHhccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEec
Q 047901 499 EEIIRRTKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSH 577 (786)
Q Consensus 499 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~ 577 (786)
+++....++|+..+.||+|+||+||+|+.+ +++.||||++..... ......+.+.+|..++..++||||+++++++.+
T Consensus 54 ~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~-~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDM-LKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-HHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHh-hhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 334444678999999999999999999875 789999999853100 011223457889999999999999999999999
Q ss_pred CCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccc
Q 047901 578 VRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFG 657 (786)
Q Consensus 578 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg 657 (786)
.+..|+||||+++|+|.+++.+. ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 133 ~~~~~lVmE~~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFG 207 (412)
T 2vd5_A 133 ENYLYLVMEYYVGGDLLTLLSKF--GERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFG 207 (412)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHH--SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEcCCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeech
Confidence 99999999999999999999764 24689999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCc-ceeeccCccccCCCCCCCCchHHHHhh-------hcCcCcccchHHHHHHHHHHHhCCCCCCcccccc
Q 047901 658 TAKLLKPNSSN-WTELVGTFGYVAPAHGNIGLHLAELAY-------TMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFS 729 (786)
Q Consensus 658 ~a~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~e~~~-------~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~ 729 (786)
+|+........ ....+||+.|+|| |++. ...++.++|||||||++|||++|+.||....
T Consensus 208 la~~~~~~~~~~~~~~~Gt~~Y~AP----------E~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~--- 274 (412)
T 2vd5_A 208 SCLKLRADGTVRSLVAVGTPDYLSP----------EILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADS--- 274 (412)
T ss_dssp TCEECCTTSCEECSSCCSCGGGCCH----------HHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSS---
T ss_pred hheeccCCCccccceeccccCcCCH----------HHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCC---
Confidence 99887644332 2345899999999 6665 3568999999999999999999999987432
Q ss_pred CCCcchhhhhhhhccC--CCCCCChhHHHHHHHHHHHHHhccCCCCCCC---CCHHHHHH
Q 047901 730 SSSSSINIEFNAMLDH--RLPHPSLDVQEKLISIMEVALLCLDGCPNSR---PTMQTVCQ 784 (786)
Q Consensus 730 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~~p~~R---Pt~~ev~~ 784 (786)
.......+... ....|. .....+..+.+++.+||. +|++| |+++|+++
T Consensus 275 -----~~~~~~~i~~~~~~~~~p~-~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 275 -----TAETYGKIVHYKEHLSLPL-VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp -----HHHHHHHHHTHHHHCCCC-----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred -----HHHHHHHHHhcccCcCCCc-cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 12222222221 122221 011223458899999999 99998 69999875
No 162
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.2e-39 Score=341.00 Aligned_cols=252 Identities=23% Similarity=0.317 Sum_probs=196.2
Q ss_pred ccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeEE
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVV 584 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 584 (786)
++|...+.||+|+||+||+|+.. ++..||+|++.... .....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 98 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR---SQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIV 98 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG---CCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccc---cchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEE
Confidence 56999999999999999999864 68899999987532 223457889999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceee---CCCCcEEEeccccce
Q 047901 585 YEYINRGSLATVLSNNF-ASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLL---DLEYEARVSDFGTAK 660 (786)
Q Consensus 585 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill---~~~~~~kl~Dfg~a~ 660 (786)
|||+++|+|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++
T Consensus 99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~ 175 (285)
T 3is5_A 99 METCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175 (285)
T ss_dssp ECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCC
T ss_pred EEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecce
Confidence 99999999999986431 235689999999999999999999999 99999999999999 456889999999998
Q ss_pred ecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhh
Q 047901 661 LLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFN 740 (786)
Q Consensus 661 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~ 740 (786)
...... ......||+.|+|| |... ..++.++||||+|+++|||++|+.||..... .....
T Consensus 176 ~~~~~~-~~~~~~~t~~y~aP----------E~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~--------~~~~~ 235 (285)
T 3is5_A 176 LFKSDE-HSTNAAGTALYMAP----------EVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL--------EEVQQ 235 (285)
T ss_dssp C-----------CTTGGGCCH----------HHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHH
T ss_pred ecCCcc-cCcCcccccCcCCh----------HHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCH--------HHHHh
Confidence 765432 23445799999999 6554 4688999999999999999999999874321 11111
Q ss_pred hhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 741 AMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.........+. .....+..+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 236 KATYKEPNYAV-ECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp HHHHCCCCCCC---CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred hhccCCccccc-ccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11111111110 00012235889999999999999999999985
No 163
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=8e-40 Score=349.04 Aligned_cols=250 Identities=24% Similarity=0.369 Sum_probs=197.4
Q ss_pred ccCccceeeccccCceEEEEEcC-CCCE----EEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCe
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKLP-SGDK----IAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRH 580 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~ 580 (786)
++|+..+.||+|+||+||+|++. +++. ||+|.+..... ......+.+|+.+++.++||||+++++++. ++.
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~ 88 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG---RQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSS 88 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTS---CSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSS
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEecccccc---HHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCc
Confidence 47999999999999999999864 4443 88888754321 122345678999999999999999999986 456
Q ss_pred eeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccce
Q 047901 581 SFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAK 660 (786)
Q Consensus 581 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~ 660 (786)
.++||||+++|+|.+++... .+.+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+
T Consensus 89 ~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 163 (325)
T 3kex_A 89 LQLVTQYLPLGSLLDHVRQH--RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVAD 163 (325)
T ss_dssp EEEEEECCTTCBSHHHHHSS--GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGG
T ss_pred cEEEEEeCCCCCHHHHHHHc--cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCccc
Confidence 88999999999999999764 35688999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCC--cceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCccccccCCCcchhh
Q 047901 661 LLKPNSS--NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFLSLFSSSSSSINI 737 (786)
Q Consensus 661 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~ 737 (786)
....... ......||..|+|| |...+..++.++|||||||++|||+| |+.||..... ..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--------~~ 225 (325)
T 3kex_A 164 LLPPDDKQLLYSEAKTPIKWMAL----------ESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL--------AE 225 (325)
T ss_dssp GSCCCTTCCC-----CCTTTSCH----------HHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCT--------TH
T ss_pred ccCcccccccccCCCCcccccCh----------HHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCH--------HH
Confidence 7754432 23445788899999 88888899999999999999999999 9999875321 11
Q ss_pred hhhhhccC-CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 738 EFNAMLDH-RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 738 ~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
....+... +...+... +..+.+++..||..||++|||+.|+++.|
T Consensus 226 ~~~~~~~~~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~el~~~l 271 (325)
T 3kex_A 226 VPDLLEKGERLAQPQIC----TIDVYMVMVKCWMIDENIRPTFKELANEF 271 (325)
T ss_dssp HHHHHHTTCBCCCCTTB----CTTTTHHHHHHTCSCTTTSCCHHHHHHHH
T ss_pred HHHHHHcCCCCCCCCcC----cHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 11111111 22222222 22478999999999999999999998864
No 164
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1e-39 Score=343.80 Aligned_cols=255 Identities=16% Similarity=0.220 Sum_probs=204.0
Q ss_pred hccCccceeeccccCceEEEEEc-CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhc-CCCcccceeeEEecCCeee
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSF 582 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~ 582 (786)
.++|++.+.||+|+||+||+|+. .+++.||||++.... ..+.+.+|+.+++.+ +|||++++++++......+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~ 82 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS------DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNV 82 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT------TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC------ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeE
Confidence 35799999999999999999985 578999999986522 123577899999999 7999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCc-----EEEeccc
Q 047901 583 VVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYE-----ARVSDFG 657 (786)
Q Consensus 583 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~-----~kl~Dfg 657 (786)
+||||+ +++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||
T Consensus 83 lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg 156 (298)
T 1csn_A 83 LVIDLL-GPSLEDLLDLC--GRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFG 156 (298)
T ss_dssp EEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCT
T ss_pred EEEEec-CCCHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECc
Confidence 999999 99999999864 34689999999999999999999999 9999999999999987766 9999999
Q ss_pred cceecCCCCC-------cceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccC
Q 047901 658 TAKLLKPNSS-------NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSS 730 (786)
Q Consensus 658 ~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~ 730 (786)
+++....... ......||+.|+|| |...+..+++++|||||||++|||++|+.||.....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--- 223 (298)
T 1csn_A 157 MVKFYRDPVTKQHIPYREKKNLSGTARYMSI----------NTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA--- 223 (298)
T ss_dssp TCEESBCTTTCCBCCCCCCCCCCSCTTTCCH----------HHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCS---
T ss_pred cccccccccccccccccCccCCCCCcccCCc----------hhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhc---
Confidence 9998765432 12345799999999 788888899999999999999999999999875321
Q ss_pred CCcchhhhhhhhccCCCCCC-ChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 731 SSSSINIEFNAMLDHRLPHP-SLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
.........+.......+ .......+..+.+++..||+.||++|||+++|++.|
T Consensus 224 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l 278 (298)
T 1csn_A 224 --ATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLF 278 (298)
T ss_dssp --CCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHH
T ss_pred --cccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHH
Confidence 111111222211111111 000112234689999999999999999999998764
No 165
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-39 Score=344.81 Aligned_cols=251 Identities=26% Similarity=0.446 Sum_probs=198.1
Q ss_pred ccCccceeeccccCceEEEEEcCC-----CCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCe
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKLPS-----GDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRH 580 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~ 580 (786)
.+|+..+.||+|+||+||+|+... +..||||++... ........+.+|+++++.++||||+++++++...+.
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 120 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG---YTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKP 120 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTT---CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCC---CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCC
Confidence 467888999999999999998542 235999999753 233455679999999999999999999999999999
Q ss_pred eeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccce
Q 047901 581 SFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAK 660 (786)
Q Consensus 581 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~ 660 (786)
.++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 121 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 195 (333)
T 1mqb_A 121 MMIITEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSR 195 (333)
T ss_dssp EEEEEECCTTEEHHHHHHHT--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred cEEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcch
Confidence 99999999999999999764 35689999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCCc---ceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCccccccCCCcchh
Q 047901 661 LLKPNSSN---WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFLSLFSSSSSSIN 736 (786)
Q Consensus 661 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~ 736 (786)
........ .....+|+.|+|| |...+..++.++|||||||++|||++ |+.||.... ..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~--------~~ 257 (333)
T 1mqb_A 196 VLEDDPEATYTTSGGKIPIRWTAP----------EAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS--------NH 257 (333)
T ss_dssp ---------------CCCGGGSCH----------HHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--------HH
T ss_pred hhccccccccccCCCCccccccCc----------hhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCC--------HH
Confidence 76543221 1223567899999 77888889999999999999999999 999986432 11
Q ss_pred hhhhhhccC-CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 737 IEFNAMLDH-RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 737 ~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
.....+.+. +.+.+.. .+..+.+++.+||+.||++|||+.++++.|
T Consensus 258 ~~~~~~~~~~~~~~~~~----~~~~l~~li~~~l~~~p~~Rps~~~l~~~L 304 (333)
T 1mqb_A 258 EVMKAINDGFRLPTPMD----CPSAIYQLMMQCWQQERARRPKFADIVSIL 304 (333)
T ss_dssp HHHHHHHTTCCCCCCTT----CBHHHHHHHHHHTCSSTTTSCCHHHHHHHH
T ss_pred HHHHHHHCCCcCCCccc----CCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 222222222 2222222 234588999999999999999999998764
No 166
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.2e-40 Score=350.91 Aligned_cols=260 Identities=17% Similarity=0.246 Sum_probs=192.1
Q ss_pred ccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeEE
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVV 584 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 584 (786)
++|...+.||+|+||+||+|+.. +++.||||++...... .....+.+|+++++.++||||+++++++...+..++|
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 78 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE---GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLV 78 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC---------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc---ccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEE
Confidence 47899999999999999999865 7889999999753211 1112345799999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecCC
Q 047901 585 YEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKP 664 (786)
Q Consensus 585 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 664 (786)
|||++ |+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 79 ~e~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 152 (324)
T 3mtl_A 79 FEYLD-KDLKQYLDDC--GNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSI 152 (324)
T ss_dssp EECCS-EEHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC--
T ss_pred ecccc-cCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccC
Confidence 99998 5999998764 35689999999999999999999999 999999999999999999999999999987665
Q ss_pred CCCcceeeccCccccCCCCCCCCchHHHHhhh-cCcCcccchHHHHHHHHHHHhCCCCCCccccccCC------------
Q 047901 665 NSSNWTELVGTFGYVAPAHGNIGLHLAELAYT-MKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSS------------ 731 (786)
Q Consensus 665 ~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~-~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~------------ 731 (786)
.........||+.|+|| |...+ ..++.++||||+||++|||++|+.||.........
T Consensus 153 ~~~~~~~~~~t~~y~aP----------E~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 222 (324)
T 3mtl_A 153 PTKTYDNEVVTLWYRPP----------DILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTE 222 (324)
T ss_dssp ----------CGGGCCH----------HHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred CccccccccCcccccCh----------hhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 44445556889999999 66654 56899999999999999999999998753311000
Q ss_pred ----CcchhhhhhhhccCCCCCCC--hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 732 ----SSSINIEFNAMLDHRLPHPS--LDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 732 ----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.................... .........+.+++.+||+.||++|||++|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 223 ETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp TTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 00000000000000000000 000112345789999999999999999999976
No 167
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.1e-39 Score=345.43 Aligned_cols=257 Identities=20% Similarity=0.280 Sum_probs=196.6
Q ss_pred HhccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeee
Q 047901 504 RTKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSF 582 (786)
Q Consensus 504 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~ 582 (786)
..++|++.+.||+|+||+||+|+.. +++.||||++..... ......+.+.+|+.+++.++||||+++++++...+..+
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~ 110 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLS-SDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLY 110 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGG-GSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccc-cCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEE
Confidence 3578999999999999999999865 688999999865221 22334578899999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceec
Q 047901 583 VVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLL 662 (786)
Q Consensus 583 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~ 662 (786)
+||||+++++|.+++... +.+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 111 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 184 (309)
T 2h34_A 111 VDMRLINGVDLAAMLRRQ---GPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASAT 184 (309)
T ss_dssp EEEECCCCEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC----
T ss_pred EEEEecCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCccc
Confidence 999999999999999864 4689999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCC-CcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhh
Q 047901 663 KPNS-SNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNA 741 (786)
Q Consensus 663 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 741 (786)
.... .......|++.|+|| |...+..++.++||||||+++|||++|+.||..... .....
T Consensus 185 ~~~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---------~~~~~ 245 (309)
T 2h34_A 185 TDEKLTQLGNTVGTLYYMAP----------ERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL---------SVMGA 245 (309)
T ss_dssp ------------CCGGGCCG----------GGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH---------HHHHH
T ss_pred cccccccccccCCCcCccCH----------HHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH---------HHHHH
Confidence 5432 223345799999999 556666788999999999999999999999874321 12222
Q ss_pred hccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCC-CHHHHHHhC
Q 047901 742 MLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRP-TMQTVCQLL 786 (786)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RP-t~~ev~~~L 786 (786)
.+......+.......+..+.+++.+||+.||++|| |++++++.|
T Consensus 246 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l 291 (309)
T 2h34_A 246 HINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAA 291 (309)
T ss_dssp HHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHH
T ss_pred HhccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHH
Confidence 222222212111222334588999999999999999 999998753
No 168
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.5e-39 Score=347.15 Aligned_cols=260 Identities=18% Similarity=0.255 Sum_probs=205.9
Q ss_pred HHHHHhccCccc-eeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcC-CCcccceeeEEe
Q 047901 500 EIIRRTKDFDAK-YCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIR-HRNIVKFYGFCS 576 (786)
Q Consensus 500 ~~~~~~~~~~~~-~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-hpniv~l~~~~~ 576 (786)
......++|.+. +.||+|+||+||+|+.. +++.||||++..... .......+.+|+.+++.+. ||||+++++++.
T Consensus 22 ~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~ 99 (327)
T 3lm5_A 22 SMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR--GQDCRAEILHEIAVLELAKSCPRVINLHEVYE 99 (327)
T ss_dssp CHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEET--TEECHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred HHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhc--chHHHHHHHHHHHHHHhccCCCCEEEEEEEEE
Confidence 334445678877 88999999999999865 689999999875322 2234568899999999995 699999999999
Q ss_pred cCCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCC---CCcEEE
Q 047901 577 HVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDL---EYEARV 653 (786)
Q Consensus 577 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~---~~~~kl 653 (786)
..+..++||||+++|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||
T Consensus 100 ~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL 175 (327)
T 3lm5_A 100 NTSEIILILEYAAGGEIFSLCLPE-LAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKI 175 (327)
T ss_dssp CSSEEEEEEECCTTEEGGGGGSSC-C-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEE
T ss_pred eCCeEEEEEEecCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEE
Confidence 999999999999999999998654 346789999999999999999999999 9999999999999998 789999
Q ss_pred eccccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCc
Q 047901 654 SDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSS 733 (786)
Q Consensus 654 ~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~ 733 (786)
+|||+++...... ......||+.|+|| |...+..++.++|||||||++|||++|+.||....
T Consensus 176 ~Dfg~a~~~~~~~-~~~~~~gt~~y~aP----------E~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~------- 237 (327)
T 3lm5_A 176 VDFGMSRKIGHAC-ELREIMGTPEYLAP----------EILNYDPITTATDMWNIGIIAYMLLTHTSPFVGED------- 237 (327)
T ss_dssp CCGGGCEEC----------CCCGGGCCH----------HHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-------
T ss_pred eeCccccccCCcc-ccccccCCcCccCC----------eeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-------
Confidence 9999998775432 23446799999999 78888889999999999999999999999986432
Q ss_pred chhhhhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 734 SINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 734 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.......+.......+.......+..+.+++..||+.||++|||++|+++
T Consensus 238 -~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 238 -NQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp -HHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -chHHHHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 12222222222222222222233445889999999999999999999975
No 169
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.7e-39 Score=366.02 Aligned_cols=253 Identities=25% Similarity=0.370 Sum_probs=210.8
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|+..+.||+|+||+||+|+.. +++.||||++..... ......+.+.+|++++++++||||+++++++...+..++
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQV-KQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-CBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhc-ccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 357999999999999999999865 789999999865322 223456789999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceee---CCCCcEEEeccccce
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLL---DLEYEARVSDFGTAK 660 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill---~~~~~~kl~Dfg~a~ 660 (786)
||||+++|+|.+++... +.+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||+|+
T Consensus 104 v~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 177 (484)
T 3nyv_A 104 VGEVYTGGELFDEIISR---KRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLST 177 (484)
T ss_dssp EECCCCSCBHHHHHHTC---SCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred EEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence 99999999999999754 5689999999999999999999999 99999999999999 567899999999998
Q ss_pred ecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhh
Q 047901 661 LLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFN 740 (786)
Q Consensus 661 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~ 740 (786)
...... ......||+.|+|| |+..+ .++.++||||+||++|+|++|++||.... ......
T Consensus 178 ~~~~~~-~~~~~~gt~~y~aP----------E~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~~ 237 (484)
T 3nyv_A 178 HFEASK-KMKDKIGTAYYIAP----------EVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN--------EYDILK 237 (484)
T ss_dssp HBCCCC-SHHHHTTGGGTCCH----------HHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHH
T ss_pred Eccccc-ccccCCCCccccCc----------eeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCC--------HHHHHH
Confidence 775443 33445799999999 66654 68999999999999999999999987432 223334
Q ss_pred hhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 741 AMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.+.......+...+...+..+.+++..||.+||++|||+.|+++
T Consensus 238 ~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 238 KVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp HHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 44444444333333444566899999999999999999999985
No 170
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=3.2e-39 Score=352.47 Aligned_cols=248 Identities=23% Similarity=0.350 Sum_probs=198.6
Q ss_pred ccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcC--CCcccceeeEEecCCeeeE
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIR--HRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~--hpniv~l~~~~~~~~~~~l 583 (786)
.+|++.+.||+|+||+||+|...+++.||||++.... ......+.+.+|+++++.++ ||||+++++++...+..|+
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~l 133 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE--ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 133 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTT--CCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEeccc--ccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEE
Confidence 4699999999999999999998889999999987532 23345678999999999996 5999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecC
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK 663 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 663 (786)
||| +.+++|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+|||++ ++.+||+|||+++...
T Consensus 134 v~E-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 134 VME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp EEE-CCSEEHHHHHHHC---SSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred EEe-cCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 999 5678999999865 4688999999999999999999999 999999999999996 6899999999998775
Q ss_pred CCCC--cceeeccCccccCCCCCCCCchHHHHhhh-----------cCcCcccchHHHHHHHHHHHhCCCCCCccccccC
Q 047901 664 PNSS--NWTELVGTFGYVAPAHGNIGLHLAELAYT-----------MKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSS 730 (786)
Q Consensus 664 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~e~~~~-----------~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~ 730 (786)
.... .....+||+.|+|| |++.+ ..++.++|||||||++|||++|+.||....
T Consensus 206 ~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~---- 271 (390)
T 2zmd_A 206 PDTTSVVKDSQVGAVNYMPP----------EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII---- 271 (390)
T ss_dssp --------CCSCCCGGGCCH----------HHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC----
T ss_pred CCCccccCCCCCcCCCccCh----------HHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh----
Confidence 4322 22345799999999 55543 468899999999999999999999986421
Q ss_pred CCcchhhhhhhhccCCCC--CCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 731 SSSSINIEFNAMLDHRLP--HPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
........+++.... .+... ...+.+++..||..||++|||+.|+++
T Consensus 272 ---~~~~~~~~~~~~~~~~~~~~~~----~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 272 ---NQISKLHAIIDPNHEIEFPDIP----EKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp ---CHHHHHHHHHCTTSCCCCCCCS----CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ---HHHHHHHHHhCccccCCCCccc----hHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 112223334433222 22222 234889999999999999999999985
No 171
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.1e-39 Score=340.20 Aligned_cols=254 Identities=24% Similarity=0.370 Sum_probs=204.4
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEe--cCCee
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCS--HVRHS 581 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~--~~~~~ 581 (786)
.++|+..+.||+|+||+||+|+.. +++.||+|++.... ......+.+.+|++++++++||||+++++++. .....
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 82 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGS--MTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTL 82 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTT--CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEccc--CCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceE
Confidence 468999999999999999999865 78999999997532 22345678999999999999999999999874 46788
Q ss_pred eEEEeccCCCCHHHHhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC-----eEEcCCCCCceeeCCCCcEEEec
Q 047901 582 FVVYEYINRGSLATVLSNNF-ASEDFDWRKRMNVITGVADALSYMHHDCFPP-----IVHRDISSNNVLLDLEYEARVSD 655 (786)
Q Consensus 582 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~-----ivHrdlk~~Nill~~~~~~kl~D 655 (786)
++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+|
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~d 159 (279)
T 2w5a_A 83 YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGD 159 (279)
T ss_dssp EEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECC
T ss_pred EEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEec
Confidence 99999999999999997532 234589999999999999999999998 7 99999999999999999999999
Q ss_pred cccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcch
Q 047901 656 FGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSI 735 (786)
Q Consensus 656 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~ 735 (786)
||.++.............||+.|+|| |...+..++.++||||||+++|||++|+.||.....
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------- 221 (279)
T 2w5a_A 160 FGLARILNHDTSFAKTFVGTPYYMSP----------EQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ-------- 221 (279)
T ss_dssp CCHHHHC---CHHHHHHHSCCTTCCH----------HHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH--------
T ss_pred CchheeeccccccccccCCCccccCh----------HHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH--------
Confidence 99998775443333445789999999 777788899999999999999999999999874321
Q ss_pred hhhhhhhccCCCC-CCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHh
Q 047901 736 NIEFNAMLDHRLP-HPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQL 785 (786)
Q Consensus 736 ~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~ 785 (786)
......+...... .+.. .+..+.+++.+||+.||++|||++|+++.
T Consensus 222 ~~~~~~i~~~~~~~~~~~----~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 268 (279)
T 2w5a_A 222 KELAGKIREGKFRRIPYR----YSDELNEIITRMLNLKDYHRPSVEEILEN 268 (279)
T ss_dssp HHHHHHHHHTCCCCCCTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHhhcccccCCcc----cCHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 1122222222221 2222 23358899999999999999999999874
No 172
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=2e-39 Score=343.67 Aligned_cols=260 Identities=22% Similarity=0.313 Sum_probs=195.8
Q ss_pred hccCccceeeccccCceEEEEEc-CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|++.+.||+|+||.||+|.. .+++.||||++.... .........+.+|+.+++.++||||+++++++...+..++
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFD-LMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTS-SCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhh-ccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 35799999999999999999985 478999999997522 2234456788999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceec
Q 047901 584 VYEYINRGSLATVLSNNF-ASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLL 662 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~ 662 (786)
||||+++|+|.+++.... ....+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 999999999999996421 245689999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhh
Q 047901 663 KPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAM 742 (786)
Q Consensus 663 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 742 (786)
...........|++.|+|| |...+..++.++||||||+++|||++|+.||..... ........+
T Consensus 187 ~~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~ 250 (310)
T 2wqm_A 187 SSKTTAAHSLVGTPYYMSP----------ERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM------NLYSLCKKI 250 (310)
T ss_dssp ------------CCSSCCH----------HHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C------CHHHHHHHH
T ss_pred cCCCccccccCCCeeEeCh----------HHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch------hHHHHHHHh
Confidence 6544334456799999999 777788899999999999999999999999864211 111112222
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 743 LDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
.....+.. .....+..+.+++..||+.||++|||+.+|++.|
T Consensus 251 ~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l 292 (310)
T 2wqm_A 251 EQCDYPPL--PSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVA 292 (310)
T ss_dssp HTTCSCCC--CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred hcccCCCC--cccccCHHHHHHHHHHcCCChhhCCCHHHHHHHH
Confidence 22222111 0111234588999999999999999999998764
No 173
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=4.2e-39 Score=364.31 Aligned_cols=254 Identities=24% Similarity=0.321 Sum_probs=206.7
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCc---------hhhHHHHHHHHHHHhhcCCCcccceeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQ---------MSDQKEFLNEIKALTKIRHRNIVKFYGF 574 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~---------~~~~~~~~~e~~~l~~l~hpniv~l~~~ 574 (786)
.++|.+.+.||+|+||+||+|+.. +++.||||++........ ....+.+.+|+++++.++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 467999999999999999999865 678999999875322110 1335678999999999999999999999
Q ss_pred EecCCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCC---cE
Q 047901 575 CSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEY---EA 651 (786)
Q Consensus 575 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~---~~ 651 (786)
+.+.+..++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~ 188 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINR---HKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNI 188 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSE
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccE
Confidence 99999999999999999999999764 5689999999999999999999999 999999999999998775 69
Q ss_pred EEeccccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCC
Q 047901 652 RVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSS 731 (786)
Q Consensus 652 kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~ 731 (786)
||+|||+|+..... .......||+.|+|| |+.. ..++.++||||+||++|+|++|..||....
T Consensus 189 kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aP----------E~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~----- 251 (504)
T 3q5i_A 189 KIVDFGLSSFFSKD-YKLRDRLGTAYYIAP----------EVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQN----- 251 (504)
T ss_dssp EECCCTTCEECCTT-SCBCCCCSCTTTCCH----------HHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----
T ss_pred EEEECCCCEEcCCC-CccccccCCcCCCCH----------HHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCC-----
Confidence 99999999877543 233456899999999 6655 468999999999999999999999987432
Q ss_pred CcchhhhhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 732 SSSINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.......+.......+...+...+..+.+++..||.+||.+|||++|+++
T Consensus 252 ---~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 252 ---DQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp ---HHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ---HHHHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 22334444444444333333334566899999999999999999999975
No 174
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2e-39 Score=342.60 Aligned_cols=250 Identities=24% Similarity=0.323 Sum_probs=202.0
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|...+.||+|+||+||+|+.. +++.||+|++.... ....+.+.+|+++++.++||||+++++++...+..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP----AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYL 83 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC----------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc----ccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEE
Confidence 457999999999999999999865 78999999997522 2234568899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceee---CCCCcEEEeccccce
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLL---DLEYEARVSDFGTAK 660 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill---~~~~~~kl~Dfg~a~ 660 (786)
||||+++++|.+++... +.+++..+..++.|++.||.|||+. +|+||||||+||++ +.++.+||+|||.++
T Consensus 84 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~ 157 (304)
T 2jam_A 84 VMQLVSGGELFDRILER---GVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSK 157 (304)
T ss_dssp EECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTC
T ss_pred EEEcCCCccHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcce
Confidence 99999999999999754 4689999999999999999999999 99999999999999 778999999999997
Q ss_pred ecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhh
Q 047901 661 LLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFN 740 (786)
Q Consensus 661 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~ 740 (786)
..... ......||+.|+||| ...+..++.++||||+|+++|||++|+.||.... ......
T Consensus 158 ~~~~~--~~~~~~~~~~y~aPE----------~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~~~~~~ 217 (304)
T 2jam_A 158 MEQNG--IMSTACGTPGYVAPE----------VLAQKPYSKAVDCWSIGVITYILLCGYPPFYEET--------ESKLFE 217 (304)
T ss_dssp CCCCB--TTHHHHSCCCBCCTT----------TBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSC--------HHHHHH
T ss_pred ecCCC--ccccccCCCCccChH----------HhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC--------HHHHHH
Confidence 65432 233457999999995 5556678999999999999999999999986422 112222
Q ss_pred hhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 741 AMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.+.......+.......+..+.+++..||..||++|||++|+++
T Consensus 218 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 218 KIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp HHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred HHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 33333222222222223446899999999999999999999975
No 175
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=8.7e-39 Score=337.62 Aligned_cols=248 Identities=24% Similarity=0.378 Sum_probs=206.5
Q ss_pred hccCccceeeccccCceEEEEEc-CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.+.|+..+.||+|+||+||+|+. .+++.||||++.... .....+.+.+|+.+++.++||||+++++++...+..++
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 97 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE---AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWI 97 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTT---CSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccc---cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEE
Confidence 34699999999999999999985 478899999997532 22346789999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecC
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK 663 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 663 (786)
||||+++++|.+++.. +.+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||.+....
T Consensus 98 v~e~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 170 (303)
T 3a7i_A 98 IMEYLGGGSALDLLEP----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 170 (303)
T ss_dssp EEECCTTEEHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECB
T ss_pred EEEeCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecC
Confidence 9999999999999964 4689999999999999999999999 99999999999999999999999999998876
Q ss_pred CCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhhc
Q 047901 664 PNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAML 743 (786)
Q Consensus 664 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 743 (786)
..........||+.|+|| |...+..++.++||||||+++|||++|+.||..... ......+.
T Consensus 171 ~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~ 232 (303)
T 3a7i_A 171 DTQIKRNTFVGTPFWMAP----------EVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP--------MKVLFLIP 232 (303)
T ss_dssp TTBCCBCCCCSCGGGCCH----------HHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHHHHHH
T ss_pred ccccccCccCCCcCccCH----------HHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH--------HHHHHHhh
Confidence 554444556899999999 778888899999999999999999999999874321 11111111
Q ss_pred cCCCC-CCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 744 DHRLP-HPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 744 ~~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
..... .+.. .+..+.+++..||+.||++|||+.|+++
T Consensus 233 ~~~~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~ 270 (303)
T 3a7i_A 233 KNNPPTLEGN----YSKPLKEFVEACLNKEPSFRPTAKELLK 270 (303)
T ss_dssp HSCCCCCCSS----CCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred cCCCCCCccc----cCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 11111 1111 2234889999999999999999999976
No 176
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=3.2e-39 Score=337.55 Aligned_cols=249 Identities=25% Similarity=0.400 Sum_probs=206.2
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|+..+.||+|+||+||+|+.. +++.||||++..... ......+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 91 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQL-EKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYL 91 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHH-HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEccccc-chHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEE
Confidence 357999999999999999999865 677899999854110 011234678899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecC
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK 663 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 663 (786)
||||+++|+|.+++... +.+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 92 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 165 (284)
T 2vgo_A 92 MLEFAPRGELYKELQKH---GRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAP 165 (284)
T ss_dssp EECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred EEEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence 99999999999999764 4689999999999999999999999 99999999999999999999999999997765
Q ss_pred CCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhhc
Q 047901 664 PNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAML 743 (786)
Q Consensus 664 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 743 (786)
.. ......|++.|+|| |...+..++.++||||||+++|||++|+.||.... .......+.
T Consensus 166 ~~--~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~~~~~~~~~ 225 (284)
T 2vgo_A 166 SL--RRRTMCGTLDYLPP----------EMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS--------HTETHRRIV 225 (284)
T ss_dssp SS--CBCCCCSCGGGCCH----------HHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHH
T ss_pred cc--ccccccCCCCcCCH----------HHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCC--------HhHHHHHHh
Confidence 32 22345799999999 77888889999999999999999999999987432 122233333
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 744 DHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 744 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
......+... +..+.+++..||+.||++|||++|+++
T Consensus 226 ~~~~~~~~~~----~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 226 NVDLKFPPFL----SDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp TTCCCCCTTS----CHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccCCCCcC----CHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 3333333322 234889999999999999999999985
No 177
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=3.9e-39 Score=363.62 Aligned_cols=252 Identities=23% Similarity=0.336 Sum_probs=204.3
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|++.+.||+|+||+||+|+.. ++..||||++...... ......+.+|+.+++.++||||+++++++.+.+..|+
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 113 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVS--TSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYL 113 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccC--chHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 346999999999999999999865 7889999999763221 2234678899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCC---CcEEEeccccce
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLE---YEARVSDFGTAK 660 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~---~~~kl~Dfg~a~ 660 (786)
||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.. +.+||+|||+|+
T Consensus 114 v~e~~~~g~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~ 187 (494)
T 3lij_A 114 VMECYKGGELFDEIIHR---MKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSA 187 (494)
T ss_dssp EEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCe
Confidence 99999999999998754 5689999999999999999999999 99999999999999764 569999999998
Q ss_pred ecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhh
Q 047901 661 LLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFN 740 (786)
Q Consensus 661 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~ 740 (786)
..... .......||+.|+|| |+.. ..++.++||||+||++|+|++|+.||.... ......
T Consensus 188 ~~~~~-~~~~~~~gt~~y~aP----------E~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~~ 247 (494)
T 3lij_A 188 VFENQ-KKMKERLGTAYYIAP----------EVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQT--------DQEILR 247 (494)
T ss_dssp ECBTT-BCBCCCCSCTTTCCH----------HHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHH
T ss_pred ECCCC-ccccccCCCcCeeCH----------HHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHH
Confidence 77643 233456899999999 6654 468999999999999999999999987432 223334
Q ss_pred hhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 741 AMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.+.......+...+...+..+.+++..||..||++|||+.|+++
T Consensus 248 ~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 248 KVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp HHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 44444444333333344556899999999999999999999975
No 178
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=6.7e-40 Score=343.65 Aligned_cols=246 Identities=21% Similarity=0.397 Sum_probs=198.1
Q ss_pred hccCccceeeccccCceEEEEEcCC-C-------CEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEe
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLPS-G-------DKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCS 576 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~ 576 (786)
.++|...+.||+|+||+||+|+... + ..||+|++.. ......+.+.+|+++++.++||||+++++++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 82 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDK----AHRNYSESFFEAASMMSKLSHKHLVLNYGVCV 82 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECG----GGGGGHHHHHHHHHHHHTSCCTTBCCEEEEEC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccc----ccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEE
Confidence 3579999999999999999998652 3 4699999864 23445678999999999999999999999999
Q ss_pred cCCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCc------
Q 047901 577 HVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYE------ 650 (786)
Q Consensus 577 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~------ 650 (786)
..+..++||||+++|+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.
T Consensus 83 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~ 157 (289)
T 4fvq_A 83 CGDENILVQEFVKFGSLDTYLKKN--KNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNP 157 (289)
T ss_dssp CTTCCEEEEECCTTCBHHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBC
T ss_pred eCCCCEEEEECCCCCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCccccccc
Confidence 999999999999999999999864 34489999999999999999999999 9999999999999998887
Q ss_pred --EEEeccccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhh-cCcCcccchHHHHHHHHHHHhCCC-CCCccc
Q 047901 651 --ARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYT-MKITEKCDVYSFGVLALEVIKGKH-PGDFLS 726 (786)
Q Consensus 651 --~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~-~~~~~~sDvwslGvil~elltg~~-Pf~~~~ 726 (786)
+||+|||.+...... ....||+.|+|| |...+ ..++.++|||||||++|||++|.. ||....
T Consensus 158 ~~~kl~Dfg~~~~~~~~----~~~~~~~~y~aP----------E~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~ 223 (289)
T 4fvq_A 158 PFIKLSDPGISITVLPK----DILQERIPWVPP----------ECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD 223 (289)
T ss_dssp CEEEECCCCSCTTTSCH----HHHHHTTTTSCH----------HHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred ceeeeccCcccccccCc----cccCCcCcccCH----------HHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccc
Confidence 999999998755322 335689999999 66665 678999999999999999999554 443211
Q ss_pred cccCCCcchhhhhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 727 LFSSSSSSINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
..............+... +..+.+++..||+.||++|||++|+++.|
T Consensus 224 ---------~~~~~~~~~~~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~l 270 (289)
T 4fvq_A 224 ---------SQRKLQFYEDRHQLPAPK----AAELANLINNCMDYEPDHRPSFRAIIRDL 270 (289)
T ss_dssp ---------HHHHHHHHHTTCCCCCCS----SCTTHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred ---------hHHHHHHhhccCCCCCCC----CHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 111111222222222211 12378999999999999999999999864
No 179
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.8e-39 Score=335.14 Aligned_cols=250 Identities=23% Similarity=0.323 Sum_probs=202.5
Q ss_pred ccCccce-eeccccCceEEEEEcC---CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCee
Q 047901 506 KDFDAKY-CIGKGEHRSVYRAKLP---SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHS 581 (786)
Q Consensus 506 ~~~~~~~-~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~ 581 (786)
++|.+.+ .||+|+||+||+|... ++..||||++... ......+.+.+|+++++.++||||+++++++ ..+..
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~ 84 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG---TEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEAL 84 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS---CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCc---cchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCc
Confidence 4566665 8999999999999753 5678999999753 2345567899999999999999999999999 45668
Q ss_pred eEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEecccccee
Q 047901 582 FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKL 661 (786)
Q Consensus 582 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~ 661 (786)
++||||+++++|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 85 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~ 159 (287)
T 1u59_A 85 MLVMEMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKA 159 (287)
T ss_dssp EEEEECCTTEEHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEEeCCCCCHHHHHHhC--CccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceee
Confidence 9999999999999999753 35689999999999999999999999 999999999999999999999999999988
Q ss_pred cCCCCCc---ceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCccccccCCCcchhh
Q 047901 662 LKPNSSN---WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFLSLFSSSSSSINI 737 (786)
Q Consensus 662 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~ 737 (786)
....... .....+|+.|+|| |...+..++.++||||||+++|||++ |+.||..... ..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--------~~ 221 (287)
T 1u59_A 160 LGADDSYYTARSAGKWPLKWYAP----------ECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--------PE 221 (287)
T ss_dssp CTTCSCEECCCCSSCCCGGGCCH----------HHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT--------HH
T ss_pred eccCcceeeccccccccccccCH----------HHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH--------HH
Confidence 7543322 1233568899999 77888889999999999999999998 9999874321 11
Q ss_pred hhhhhccC-CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 738 EFNAMLDH-RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 738 ~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
....+... +...+.. .+..+.+++..||+.||++|||+.++++.|
T Consensus 222 ~~~~i~~~~~~~~~~~----~~~~l~~li~~~l~~~p~~Rps~~~l~~~l 267 (287)
T 1u59_A 222 VMAFIEQGKRMECPPE----CPPELYALMSDCWIYKWEDRPDFLTVEQRM 267 (287)
T ss_dssp HHHHHHTTCCCCCCTT----CCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred HHHHHhcCCcCCCCCC----cCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 11222221 1222222 234588999999999999999999999864
No 180
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.7e-39 Score=346.33 Aligned_cols=257 Identities=21% Similarity=0.365 Sum_probs=207.5
Q ss_pred HHHhccCccceeeccccCceEEEEEcC------CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEE
Q 047901 502 IRRTKDFDAKYCIGKGEHRSVYRAKLP------SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFC 575 (786)
Q Consensus 502 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~ 575 (786)
....++|+..+.||+|+||+||+|+.. +++.||||++... ........+.+|+.+++.++||||+++++++
T Consensus 21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA---ASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTT---SCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccc---cCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 334678999999999999999999754 3678999998752 2334556789999999999999999999999
Q ss_pred ecCCeeeEEEeccCCCCHHHHhhcCC-------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCC
Q 047901 576 SHVRHSFVVYEYINRGSLATVLSNNF-------ASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLE 648 (786)
Q Consensus 576 ~~~~~~~lv~e~~~~g~L~~~l~~~~-------~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~ 648 (786)
.+.+..++||||+++|+|.+++.... ....+++..+..++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~ 174 (322)
T 1p4o_A 98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 174 (322)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTT
T ss_pred ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCC
Confidence 99999999999999999999997531 124578999999999999999999999 99999999999999999
Q ss_pred CcEEEeccccceecCCCCC--cceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCcc
Q 047901 649 YEARVSDFGTAKLLKPNSS--NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFL 725 (786)
Q Consensus 649 ~~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~ 725 (786)
+.+||+|||+++....... ......+|+.|+|| |...+..++.++||||||+++|||++ |+.||...
T Consensus 175 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~ 244 (322)
T 1p4o_A 175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP----------ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 244 (322)
T ss_dssp CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCH----------HHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS
T ss_pred CeEEECcCccccccccccccccccCCCCCCCccCh----------hhhccCCCCchhhHHHHHHHHHHHHhcCCCccccC
Confidence 9999999999986643321 12234678899999 78888889999999999999999999 89998643
Q ss_pred ccccCCCcchhhhhhhhccCCCC-CCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 726 SLFSSSSSSINIEFNAMLDHRLP-HPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
. .......+...... .+.. .+..+.+++..||+.||++|||+.|+++.|
T Consensus 245 ~--------~~~~~~~~~~~~~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~e~l~~L 294 (322)
T 1p4o_A 245 S--------NEQVLRFVMEGGLLDKPDN----CPDMLFELMRMCWQYNPKMRPSFLEIISSI 294 (322)
T ss_dssp C--------HHHHHHHHHTTCCCCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred C--------HHHHHHHHHcCCcCCCCCC----CCHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 2 12222222222222 2222 233588999999999999999999999864
No 181
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2.1e-39 Score=346.81 Aligned_cols=262 Identities=22% Similarity=0.336 Sum_probs=198.0
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|+..+.||+|+||+||+|+.. +++.||||++.... ......+.+.+|+++++.++||||+++++++...+..++
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 101 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD--DDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYL 101 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCS--SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCC--CchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEE
Confidence 457999999999999999999865 58899999986532 233445678899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecC
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK 663 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 663 (786)
||||+++++|.++.... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 102 v~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 175 (331)
T 4aaa_A 102 VFEFVDHTILDDLELFP---NGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLA 175 (331)
T ss_dssp EEECCSEEHHHHHHHST---TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred EEecCCcchHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeec
Confidence 99999999998887643 5689999999999999999999999 99999999999999999999999999998776
Q ss_pred CCCCcceeeccCccccCCCCCCCCchHHHHhhhc-CcCcccchHHHHHHHHHHHhCCCCCCccccccCCC----------
Q 047901 664 PNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTM-KITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSS---------- 732 (786)
Q Consensus 664 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~-~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~---------- 732 (786)
..........||+.|+|| |...+. .++.++||||+||++|||++|+.||..........
T Consensus 176 ~~~~~~~~~~~t~~y~aP----------E~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 245 (331)
T 4aaa_A 176 APGEVYDDEVATRWYRAP----------ELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLI 245 (331)
T ss_dssp --------CCCCCTTCCH----------HHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCC
T ss_pred CCccccCCCcCCccccCc----------ccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCC
Confidence 544444556899999999 666554 68899999999999999999999987533210000
Q ss_pred cchhhh------hhhhccCCCCCCCh---hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 733 SSINIE------FNAMLDHRLPHPSL---DVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 733 ~~~~~~------~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
...... .............. .....+..+.+++.+||+.||++|||++|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 246 PRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp HHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred hhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000000 00000000000000 00122356899999999999999999999986
No 182
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.7e-39 Score=343.89 Aligned_cols=250 Identities=22% Similarity=0.416 Sum_probs=195.8
Q ss_pred hccCccceeeccccCceEEEEEcC-CCC----EEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCC
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGD----KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVR 579 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~ 579 (786)
.++|+..+.||+|+||+||+|++. +++ +||+|.+... ......+.+.+|+.+++.++||||+++++++....
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~---~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 90 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA---TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 90 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCC---SSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccc---cCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC
Confidence 357999999999999999999854 444 3588877542 22345678999999999999999999999998754
Q ss_pred eeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccc
Q 047901 580 HSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTA 659 (786)
Q Consensus 580 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a 659 (786)
.++|+||+++|+|.+++... ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 91 -~~~v~~~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a 164 (327)
T 3lzb_A 91 -VQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA 164 (327)
T ss_dssp -EEEEECCCSSCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC-
T ss_pred -ceEEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcce
Confidence 78999999999999999864 35689999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCC--cceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCccccccCCCcchh
Q 047901 660 KLLKPNSS--NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFLSLFSSSSSSIN 736 (786)
Q Consensus 660 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~ 736 (786)
+....... ......+|+.|+|| |...+..++.++|||||||++|||++ |+.||.....
T Consensus 165 ~~~~~~~~~~~~~~~~~t~~y~aP----------E~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--------- 225 (327)
T 3lzb_A 165 KLLGAEEKEYHAEGGKVPIKWMAL----------ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--------- 225 (327)
T ss_dssp ---------------CCCGGGSCH----------HHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG---------
T ss_pred eEccCccccccccCCCccccccCH----------HHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCH---------
Confidence 87654322 22334568899999 88888899999999999999999999 9999875321
Q ss_pred hhhhhhccC--CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 737 IEFNAMLDH--RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 737 ~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
......+.. ....+... +..+.+++..||+.||++|||+.|+++.|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~ell~~L 273 (327)
T 3lzb_A 226 SEISSILEKGERLPQPPIC----TIDVYMIMRKCWMIDADSRPKFRELIIEF 273 (327)
T ss_dssp GGHHHHHHTTCCCCCCTTB----CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCccC----CHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 112222222 22223222 23488999999999999999999999864
No 183
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=3.5e-39 Score=336.39 Aligned_cols=250 Identities=22% Similarity=0.413 Sum_probs=203.3
Q ss_pred hccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeEE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVV 584 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 584 (786)
.++|+..+.||+|+||+||+|+..+++.||||++.... ...+.+.+|+++++.++||||+++++++.. +..++|
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v 85 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-----MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 85 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-----ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEE
Confidence 46799999999999999999998888899999986521 235678999999999999999999999874 568999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecCC
Q 047901 585 YEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKP 664 (786)
Q Consensus 585 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 664 (786)
|||+++++|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.++....
T Consensus 86 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 161 (279)
T 1qpc_A 86 TEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 161 (279)
T ss_dssp EECCTTCBHHHHTTSH-HHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EecCCCCCHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccC
Confidence 9999999999999753 123689999999999999999999999 999999999999999999999999999988764
Q ss_pred CCCc-ceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCccccccCCCcchhhhhhhh
Q 047901 665 NSSN-WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFLSLFSSSSSSINIEFNAM 742 (786)
Q Consensus 665 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~ 742 (786)
.... .....++..|+|| |...+..++.++||||||+++|||++ |+.||..... ......+
T Consensus 162 ~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--------~~~~~~~ 223 (279)
T 1qpc_A 162 NEYTAREGAKFPIKWTAP----------EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--------PEVIQNL 223 (279)
T ss_dssp SCEECCTTCCCCTTTSCH----------HHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH--------HHHHHHH
T ss_pred cccccccCCCCccCccCh----------hhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH--------HHHHHHH
Confidence 3221 1234567899999 77788889999999999999999999 9999864321 1122222
Q ss_pred ccC-CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 743 LDH-RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 743 ~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
... +...+.. .+..+.+++..||+.||++|||++++++.|
T Consensus 224 ~~~~~~~~~~~----~~~~l~~li~~~l~~~p~~Rps~~~l~~~l 264 (279)
T 1qpc_A 224 ERGYRMVRPDN----CPEELYQLMRLCWKERPEDRPTFDYLRSVL 264 (279)
T ss_dssp HTTCCCCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred hcccCCCCccc----ccHHHHHHHHHHhccChhhCCCHHHHHHHH
Confidence 221 1122222 233588999999999999999999998764
No 184
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=2.2e-39 Score=339.71 Aligned_cols=254 Identities=25% Similarity=0.408 Sum_probs=191.6
Q ss_pred hccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeEE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVV 584 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 584 (786)
.++|++.+.||+|+||+||+|+.. ..||||++.... ......+.|.+|++++++++||||+++++++ .....++|
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv 97 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTA--PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIV 97 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSS--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccC--CCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEE
Confidence 467999999999999999999874 369999997532 2344567899999999999999999999976 45668999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecCC
Q 047901 585 YEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKP 664 (786)
Q Consensus 585 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 664 (786)
|||+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 98 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 172 (289)
T 3og7_A 98 TQWCEGSSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR 172 (289)
T ss_dssp EECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred EEecCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceecccccc
Confidence 9999999999999654 35689999999999999999999999 999999999999999999999999999986643
Q ss_pred C--CCcceeeccCccccCCCCCCCCchHHHHhh---hcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhh
Q 047901 665 N--SSNWTELVGTFGYVAPAHGNIGLHLAELAY---TMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEF 739 (786)
Q Consensus 665 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~---~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~ 739 (786)
. ........||+.|+|| |... ...++.++||||||+++|||++|+.||..... ....
T Consensus 173 ~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--------~~~~ 234 (289)
T 3og7_A 173 WSGSHQFEQLSGSILWMAP----------EVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN--------RDQI 234 (289)
T ss_dssp -----------CCCTTCCH----------HHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCC--------HHHH
T ss_pred ccccccccccCCCccccCc----------hhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccch--------HHHH
Confidence 2 2223445799999999 6554 56688899999999999999999999874321 1111
Q ss_pred hhhc-cCCCCC-CChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 740 NAML-DHRLPH-PSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 740 ~~~~-~~~~~~-~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
...+ ...... ........+..+.+++..||+.||++|||+.|+++.|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L 283 (289)
T 3og7_A 235 IEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEI 283 (289)
T ss_dssp HHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHH
Confidence 1111 111111 1111122334589999999999999999999999864
No 185
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=3.3e-39 Score=344.73 Aligned_cols=259 Identities=24% Similarity=0.357 Sum_probs=205.6
Q ss_pred hccCccceeeccccCceEEEEEc-----CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEe--c
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKL-----PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCS--H 577 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~--~ 577 (786)
.++|+..+.||+|+||+||+|++ .+++.||||++.. ......+.+.+|++++++++||||+++++++. .
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 97 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQH----SGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPG 97 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESS----CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEecc----CCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCC
Confidence 45799999999999999999983 3678999999975 23455677999999999999999999999886 4
Q ss_pred CCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccc
Q 047901 578 VRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFG 657 (786)
Q Consensus 578 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg 657 (786)
....++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 98 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg 172 (327)
T 3lxl_A 98 RQSLRLVMEYLPSGCLRDFLQRH--RARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFG 172 (327)
T ss_dssp SCEEEEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGG
T ss_pred CceEEEEEeecCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccc
Confidence 56789999999999999999764 24689999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCc---ceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCcccccc-----
Q 047901 658 TAKLLKPNSSN---WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFS----- 729 (786)
Q Consensus 658 ~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~----- 729 (786)
+++........ .....||..|+|| |...+..+++++||||||+++|||++|+.||.......
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~ 242 (327)
T 3lxl_A 173 LAKLLPLDKDYYVVREPGQSPIFWYAP----------ESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMG 242 (327)
T ss_dssp GCEECCTTCSEEECSSCCCSCGGGSCH----------HHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC
T ss_pred cceecccCCccceeeccCCccccccCH----------HHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcc
Confidence 99987544321 2234688889999 78888889999999999999999999999976432100
Q ss_pred -CCCcchhhhhhhhccCC--CCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 730 -SSSSSINIEFNAMLDHR--LPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 730 -~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
.............+... ...+.. .+..+.+++..||+.||++|||++|+++.|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~li~~~l~~dP~~Rps~~ell~~L 298 (327)
T 3lxl_A 243 CERDVPALSRLLELLEEGQRLPAPPA----CPAEVHELMKLCWAPSPQDRPSFSALGPQL 298 (327)
T ss_dssp ----CCHHHHHHHHHHTTCCCCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred cccccccHHHHHHHhhcccCCCCCCc----ccHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 00000111112222221 122222 234589999999999999999999998764
No 186
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=8.8e-39 Score=336.75 Aligned_cols=252 Identities=26% Similarity=0.378 Sum_probs=199.2
Q ss_pred hccCccceeeccccCceEEEEEcCCC----CEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEe-cCC
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLPSG----DKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCS-HVR 579 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~-~~~ 579 (786)
..+|+..+.||+|+||+||+|+..+. ..||+|++.. .......+.+.+|+.++++++||||+++++++. .++
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~---~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 100 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR---ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 100 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETT---CCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEeccc---CCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCC
Confidence 35688899999999999999985422 2589999865 233455678999999999999999999999864 556
Q ss_pred eeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccc
Q 047901 580 HSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTA 659 (786)
Q Consensus 580 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a 659 (786)
..++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 101 ~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a 175 (298)
T 3f66_A 101 SPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLA 175 (298)
T ss_dssp CCEEEEECCTTCBHHHHHHCT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGG
T ss_pred ceEEEEeCCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccccc
Confidence 789999999999999999753 35689999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCC----cceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCccccccCCCcc
Q 047901 660 KLLKPNSS----NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFLSLFSSSSSS 734 (786)
Q Consensus 660 ~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~~~~~~~~~~ 734 (786)
+....... ......+|+.|+|| |...+..+++++||||+|+++|||++ |.+||.....
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~------- 238 (298)
T 3f66_A 176 RDMYDKEYYSVHNKTGAKLPVKWMAL----------ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT------- 238 (298)
T ss_dssp CCCSCGGGCBC-----CCBCGGGSCH----------HHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCT-------
T ss_pred ccccccchhccccccCCCCCccccCh----------HHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCH-------
Confidence 87654321 12344678899999 78888899999999999999999999 5566553221
Q ss_pred hhhhhhhhccCCC-CCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 735 INIEFNAMLDHRL-PHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 735 ~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
............ ..+... +..+.+++..||+.||++|||+.|+++.|
T Consensus 239 -~~~~~~~~~~~~~~~~~~~----~~~l~~li~~~l~~~p~~Rps~~ell~~L 286 (298)
T 3f66_A 239 -FDITVYLLQGRRLLQPEYC----PDPLYEVMLKCWHPKAEMRPSFSELVSRI 286 (298)
T ss_dssp -TTHHHHHHTTCCCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred -HHHHHHHhcCCCCCCCccC----CHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 111112222221 222222 23488999999999999999999999864
No 187
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.4e-39 Score=353.01 Aligned_cols=203 Identities=27% Similarity=0.428 Sum_probs=163.9
Q ss_pred HhccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcC-CCcccceeeEEecC--C
Q 047901 504 RTKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIR-HRNIVKFYGFCSHV--R 579 (786)
Q Consensus 504 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-hpniv~l~~~~~~~--~ 579 (786)
..++|++.+.||+|+||+||+|... +++.||||++.... ......+.+.+|+.+++.+. ||||+++++++... .
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~ 84 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAF--QNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDR 84 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC----CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSS
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccc--cChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCC
Confidence 3568999999999999999999854 78999999986532 23445667889999999997 99999999999654 3
Q ss_pred eeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccc
Q 047901 580 HSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTA 659 (786)
Q Consensus 580 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a 659 (786)
..|+|||||+ |+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|
T Consensus 85 ~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a 156 (388)
T 3oz6_A 85 DVYLVFDYME-TDLHAVIRA----NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLS 156 (388)
T ss_dssp CEEEEEECCS-EEHHHHHHH----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecccC-cCHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccc
Confidence 7899999998 599999875 3688999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCC---------------------CCcceeeccCccccCCCCCCCCchHHHHhhh-cCcCcccchHHHHHHHHHHHh
Q 047901 660 KLLKPN---------------------SSNWTELVGTFGYVAPAHGNIGLHLAELAYT-MKITEKCDVYSFGVLALEVIK 717 (786)
Q Consensus 660 ~~~~~~---------------------~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~-~~~~~~sDvwslGvil~ellt 717 (786)
+..... .......+||+.|+|| |++.+ ..++.++||||+||++|||++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~~DiwSlG~il~ell~ 226 (388)
T 3oz6_A 157 RSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAP----------EILLGSTKYTKGIDMWSLGCILGEILC 226 (388)
T ss_dssp EESSSCCCCCCCGGGCCC---------------CCCGGGGCCH----------HHHTTCCCCCTHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccCCcccCCcCCH----------HHhcCCCCCCChhhHHHHHHHHHHHHh
Confidence 876431 1112345899999999 66655 678999999999999999999
Q ss_pred CCCCCCccc
Q 047901 718 GKHPGDFLS 726 (786)
Q Consensus 718 g~~Pf~~~~ 726 (786)
|++||....
T Consensus 227 g~~pf~~~~ 235 (388)
T 3oz6_A 227 GKPIFPGSS 235 (388)
T ss_dssp SSCSCCCSS
T ss_pred CCCCCCCCC
Confidence 999997543
No 188
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-39 Score=348.63 Aligned_cols=258 Identities=22% Similarity=0.306 Sum_probs=196.7
Q ss_pred HHhccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCc-hhhHHHHHHHHHHHhhcCCCcccceeeEEecCCe
Q 047901 503 RRTKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQ-MSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRH 580 (786)
Q Consensus 503 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~ 580 (786)
...++|+..+.||+|+||+||+|+.. +++.||||++........ ....+.+.+|+++++.++||||+++++++...+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34578999999999999999999875 689999999975322111 1123467899999999999999999999999999
Q ss_pred eeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccce
Q 047901 581 SFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAK 660 (786)
Q Consensus 581 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~ 660 (786)
.++||||+++ +|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDN--SLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTC--CSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred eEEEEEcCCC-CHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccce
Confidence 9999999986 899988754 35688889999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCCcceeeccCccccCCCCCCCCchHHHHhhh-cCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhh
Q 047901 661 LLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYT-MKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEF 739 (786)
Q Consensus 661 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~-~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~ 739 (786)
.............||+.|+|| |...+ ..++.++|||||||++|||++|.+||...... ...
T Consensus 161 ~~~~~~~~~~~~~~t~~y~aP----------E~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~--------~~~ 222 (346)
T 1ua2_A 161 SFGSPNRAYTHQVVTRWYRAP----------ELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL--------DQL 222 (346)
T ss_dssp TTTSCCCCCCCSCCCCTTCCH----------HHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHH
T ss_pred eccCCcccCCcccccccccCc----------hHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH--------HHH
Confidence 776554445566899999999 66654 45889999999999999999999998753311 011
Q ss_pred hhhccC-------C----------C---CCCChh----HHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 740 NAMLDH-------R----------L---PHPSLD----VQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 740 ~~~~~~-------~----------~---~~~~~~----~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
..+... . . ..+... ....+..+.+++..||..||++|||++|+++
T Consensus 223 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 291 (346)
T 1ua2_A 223 TRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291 (346)
T ss_dssp HHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred HHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence 111000 0 0 000000 0112346899999999999999999999986
No 189
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=7.1e-39 Score=334.38 Aligned_cols=251 Identities=22% Similarity=0.355 Sum_probs=199.6
Q ss_pred hccCccceeeccccCceEEEEEcCC----CCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCe
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLPS----GDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRH 580 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~ 580 (786)
.++|+..+.||+|+||+||+|+... +..||||++... ......+.+.+|+.+++.++||||+++++++.+ +.
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~ 86 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKD---CTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EP 86 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTT---SCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SS
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccc---cCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CC
Confidence 4679999999999999999998532 235999998752 233456789999999999999999999999875 45
Q ss_pred eeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccce
Q 047901 581 SFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAK 660 (786)
Q Consensus 581 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~ 660 (786)
.++||||+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+.
T Consensus 87 ~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 161 (281)
T 3cc6_A 87 TWIIMELYPYGELGHYLERN--KNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSR 161 (281)
T ss_dssp CEEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGG
T ss_pred CEEEEecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCc
Confidence 68999999999999999764 34689999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCC-cceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCccccccCCCcchhhh
Q 047901 661 LLKPNSS-NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFLSLFSSSSSSINIE 738 (786)
Q Consensus 661 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~ 738 (786)
....... ......+++.|+|| |...+..++.++||||||+++|||++ |+.||..... ...
T Consensus 162 ~~~~~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~--------~~~ 223 (281)
T 3cc6_A 162 YIEDEDYYKASVTRLPIKWMSP----------ESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN--------KDV 223 (281)
T ss_dssp CC---------CCCCCGGGCCH----------HHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCG--------GGH
T ss_pred ccccccccccccCCCCcceeCc----------hhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCCh--------HHH
Confidence 7654322 22334678899999 77888889999999999999999998 9999864321 111
Q ss_pred hhhhcc-CCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 739 FNAMLD-HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 739 ~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
...+.. ...+.+... +..+.+++.+||+.||++|||+.|+++.|
T Consensus 224 ~~~~~~~~~~~~~~~~----~~~l~~li~~~l~~~p~~Rps~~ell~~L 268 (281)
T 3cc6_A 224 IGVLEKGDRLPKPDLC----PPVLYTLMTRCWDYDPSDRPRFTELVCSL 268 (281)
T ss_dssp HHHHHHTCCCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHhcCCCCCCCCCC----CHHHHHHHHHHccCCchhCcCHHHHHHHH
Confidence 111111 122222222 23488999999999999999999998764
No 190
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=5.5e-39 Score=357.02 Aligned_cols=346 Identities=24% Similarity=0.249 Sum_probs=213.7
Q ss_pred CeEEEEcCCCCCcccCCcCccCCCCCCcEEECCCCCccccCchhccCCCCC-------------CEEeCcCCcccccCCc
Q 047901 2 RVNSINLTSTGLKGTLQEFSFSSFPHLAYLDLSINGFFGTLPPQVRNLSKL-------------KYLDLSENELSGKIPP 68 (786)
Q Consensus 2 ~~~~l~l~~~~l~~~l~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L-------------~~L~L~~N~l~~~~~~ 68 (786)
++++|++++|++ +.+|+ +|..+++|++|++++|++.+..|..+..+.+| ++|++++|+++++ |.
T Consensus 12 ~L~~L~l~~n~l-~~iP~-~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~l-p~ 88 (454)
T 1jl5_A 12 FLQEPLRHSSNL-TEMPV-EAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSL-PE 88 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCC-CS
T ss_pred cchhhhcccCch-hhCCh-hHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccC-CC
Confidence 478899999999 79998 68999999999999999998999999988864 8999999998854 33
Q ss_pred cccCCCCCCEEeCCCccCcccCCCCCCCCCCcEEEccCCcCcccCchhhcccCCcceeccccccccccCChhhhccCccc
Q 047901 69 EIGLLTHLFSLDLSLNQFSGTFPPICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLE 148 (786)
Q Consensus 69 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~ 148 (786)
..++|++|+|++|++++++.. +++|++|++++|+++++... .++|++|++++|++++ +| .+..+++|+
T Consensus 89 ---~~~~L~~L~l~~n~l~~lp~~---~~~L~~L~l~~n~l~~l~~~----~~~L~~L~L~~n~l~~-lp-~~~~l~~L~ 156 (454)
T 1jl5_A 89 ---LPPHLESLVASCNSLTELPEL---PQSLKSLLVDNNNLKALSDL----PPLLEYLGVSNNQLEK-LP-ELQNSSFLK 156 (454)
T ss_dssp ---CCTTCSEEECCSSCCSSCCCC---CTTCCEEECCSSCCSCCCSC----CTTCCEEECCSSCCSS-CC-CCTTCTTCC
T ss_pred ---CcCCCCEEEccCCcCCccccc---cCCCcEEECCCCccCcccCC----CCCCCEEECcCCCCCC-Cc-ccCCCCCCC
Confidence 247888888888888875543 36788888888887754321 1578888888888875 55 477778888
Q ss_pred eeecccccccCCCCCcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCccc
Q 047901 149 ILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNI 228 (786)
Q Consensus 149 ~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l 228 (786)
.|++++|++++++..+ .+|+.|++++|++++++ .|..+++|++|++++|+++++.. . .++|++|++++|++
T Consensus 157 ~L~l~~N~l~~lp~~~---~~L~~L~L~~n~l~~l~--~~~~l~~L~~L~l~~N~l~~l~~-~---~~~L~~L~l~~n~l 227 (454)
T 1jl5_A 157 IIDVDNNSLKKLPDLP---PSLEFIAAGNNQLEELP--ELQNLPFLTAIYADNNSLKKLPD-L---PLSLESIVAGNNIL 227 (454)
T ss_dssp EEECCSSCCSCCCCCC---TTCCEEECCSSCCSSCC--CCTTCTTCCEEECCSSCCSSCCC-C---CTTCCEEECCSSCC
T ss_pred EEECCCCcCcccCCCc---ccccEEECcCCcCCcCc--cccCCCCCCEEECCCCcCCcCCC-C---cCcccEEECcCCcC
Confidence 8888888877644332 47778888888887743 57778888888888887776432 1 24777788888877
Q ss_pred CCCCCccccCCccccEEEeecccccccCCCCcccccccccccccccccCCCCccccccCCcCceeccccccccccchhhh
Q 047901 229 TGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSILEAL 308 (786)
Q Consensus 229 ~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 308 (786)
+ .+| .+..+++|+.|++++|++++ +|.. +++|+.|++++|++++++ .. +++|+.|++++|++++++..
T Consensus 228 ~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~l~-~~---~~~L~~L~ls~N~l~~l~~~-- 295 (454)
T 1jl5_A 228 E-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTDLP-EL---PQSLTFLDVSENIFSGLSEL-- 295 (454)
T ss_dssp S-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSCCC-CC---CTTCCEEECCSSCCSEESCC--
T ss_pred C-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccccC-cc---cCcCCEEECcCCccCcccCc--
Confidence 7 345 37777778888888777774 3332 257777777777777532 22 36677777777776654311
Q ss_pred hcccCCcEEEecccccCCCcchHHhhh-cCcCeeeccCCccCCCCCcccccccccceeccccccccccCCcccccCCCce
Q 047901 309 GFMFKLFYLNFSHNQFSQEIPEDLALL-AHLSELDLSHNLFKGSIPSRICNLESLEKLNLSHNNISGQIPACFIGMSGLL 387 (786)
Q Consensus 309 ~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 387 (786)
.++|++|++++|++++.. .+ ++|+.|++++|++++ +|.. +++|+.|++++|++++ +|. .+++|+
T Consensus 296 --~~~L~~L~l~~N~l~~i~-----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~ 360 (454)
T 1jl5_A 296 --PPNLYYLNASSNEIRSLC-----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPE---LPQNLK 360 (454)
T ss_dssp --CTTCCEEECCSSCCSEEC-----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCC
T ss_pred --CCcCCEEECcCCcCCccc-----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-ccc---hhhhcc
Confidence 145555555555554321 11 355555555555553 3322 3455555555555553 232 245555
Q ss_pred EEeccCCcccc
Q 047901 388 SIDISYNELRG 398 (786)
Q Consensus 388 ~L~l~~N~l~~ 398 (786)
.|++++|++++
T Consensus 361 ~L~L~~N~l~~ 371 (454)
T 1jl5_A 361 QLHVEYNPLRE 371 (454)
T ss_dssp EEECCSSCCSS
T ss_pred EEECCCCCCCc
Confidence 55555555555
No 191
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.9e-39 Score=357.81 Aligned_cols=259 Identities=21% Similarity=0.236 Sum_probs=193.4
Q ss_pred HhccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCC----CchhhHHHHHHHHHHHhhcCCCcccceeeEEecC
Q 047901 504 RTKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPN----DQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHV 578 (786)
Q Consensus 504 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~----~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~ 578 (786)
..++|.+.+.||+|+||+||+|... +++.||||++...... ........+.+|++++++++||||+++++++..
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 3568999999999999999999854 6889999998652111 111223357899999999999999999999864
Q ss_pred CeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCC---CcEEEec
Q 047901 579 RHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLE---YEARVSD 655 (786)
Q Consensus 579 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~---~~~kl~D 655 (786)
+..++||||+++|+|.+++... +.+++..+..++.|++.||+|||+. +|+||||||+|||++.+ +.+||+|
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~D 285 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVGN---KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 285 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECC
T ss_pred CceEEEEEcCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEee
Confidence 5579999999999999998754 5689999999999999999999999 99999999999999754 4599999
Q ss_pred cccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcch
Q 047901 656 FGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSI 735 (786)
Q Consensus 656 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~ 735 (786)
||+|+..... .......||+.|+|||++.. .....++.++|||||||++|||++|+.||..... .
T Consensus 286 FG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~-------~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~-------~ 350 (419)
T 3i6u_A 286 FGHSKILGET-SLMRTLCGTPTYLAPEVLVS-------VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT-------Q 350 (419)
T ss_dssp SSTTTSCC------------CTTCCTTTTC-----------CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSS-------S
T ss_pred cccceecCCC-ccccccCCCCCccCceeeec-------CCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcc-------h
Confidence 9999876533 22345689999999964321 1235678899999999999999999999874221 1
Q ss_pred hhhhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 736 NIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
......+.......+.......+..+.+++.+||+.||++|||++|+++
T Consensus 351 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 351 VSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp CCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 1111222223333222222334456899999999999999999999986
No 192
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.5e-39 Score=347.43 Aligned_cols=262 Identities=17% Similarity=0.258 Sum_probs=191.3
Q ss_pred HhccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeee
Q 047901 504 RTKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSF 582 (786)
Q Consensus 504 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~ 582 (786)
..++|++.+.||+|+||+||+|+.. +++.||||++.... ......+.+.+|+++++.++||||+++++++...+..+
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEH--EEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC----------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccc--cccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence 3568999999999999999999854 78899999997532 22233456789999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceee-----CCCCcEEEeccc
Q 047901 583 VVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLL-----DLEYEARVSDFG 657 (786)
Q Consensus 583 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill-----~~~~~~kl~Dfg 657 (786)
+||||+++ +|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||
T Consensus 110 lv~e~~~~-~L~~~~~~~---~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg 182 (329)
T 3gbz_A 110 LIFEYAEN-DLKKYMDKN---PDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFG 182 (329)
T ss_dssp EEEECCSE-EHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTT
T ss_pred EEEecCCC-CHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCC
Confidence 99999985 999999865 4689999999999999999999999 99999999999999 455669999999
Q ss_pred cceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhh-cCcCcccchHHHHHHHHHHHhCCCCCCccccccCCC----
Q 047901 658 TAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYT-MKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSS---- 732 (786)
Q Consensus 658 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~-~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~---- 732 (786)
+|+.............||+.|+|| |+..+ ..++.++|||||||++|||++|+.||..........
T Consensus 183 ~a~~~~~~~~~~~~~~~t~~y~aP----------E~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~ 252 (329)
T 3gbz_A 183 LARAFGIPIRQFTHEIITLWYRPP----------EILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFE 252 (329)
T ss_dssp HHHHHC-----------CCTTCCH----------HHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred CccccCCcccccCCCcCCccccCH----------HHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHH
Confidence 998776544445556889999999 66665 448999999999999999999999987533210000
Q ss_pred ------cchhhhhhhhc--cCCCC-CCChhHH-----HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 733 ------SSINIEFNAML--DHRLP-HPSLDVQ-----EKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 733 ------~~~~~~~~~~~--~~~~~-~~~~~~~-----~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
........... ....+ ....... .....+.+++.+||+.||++|||++|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 253 VLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp HHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 00000000000 00000 0000000 02345889999999999999999999986
No 193
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=8.5e-39 Score=343.92 Aligned_cols=257 Identities=23% Similarity=0.348 Sum_probs=201.6
Q ss_pred HHHhccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhh--cCCCcccceeeEEecCC
Q 047901 502 IRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTK--IRHRNIVKFYGFCSHVR 579 (786)
Q Consensus 502 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~--l~hpniv~l~~~~~~~~ 579 (786)
....++|++.+.||+|+||+||+|+. +++.||||++.. .....+.+|++++.. ++||||+++++++....
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~-------~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~ 109 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSS-------REERSWFREAEIYQTVMLRHENILGFIAADNKDN 109 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECG-------GGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCc-------hhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC
Confidence 34456899999999999999999988 488999999853 234677889999887 68999999999998765
Q ss_pred ----eeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHh--------hCCCCCeEEcCCCCCceeeCC
Q 047901 580 ----HSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMH--------HDCFPPIVHRDISSNNVLLDL 647 (786)
Q Consensus 580 ----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivHrdlk~~Nill~~ 647 (786)
..++||||+++|+|.+++... .+++..++.++.|++.||+||| +. +|+||||||+||+++.
T Consensus 110 ~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~ 182 (342)
T 1b6c_B 110 GTWTQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKK 182 (342)
T ss_dssp SSCCCEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECT
T ss_pred CccceeEEEEeecCCCcHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECC
Confidence 789999999999999999753 5899999999999999999999 66 9999999999999999
Q ss_pred CCcEEEeccccceecCCCCCc----ceeeccCccccCCCCCCCCchHHHHhhhc------CcCcccchHHHHHHHHHHHh
Q 047901 648 EYEARVSDFGTAKLLKPNSSN----WTELVGTFGYVAPAHGNIGLHLAELAYTM------KITEKCDVYSFGVLALEVIK 717 (786)
Q Consensus 648 ~~~~kl~Dfg~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~e~~~~~------~~~~~sDvwslGvil~ellt 717 (786)
++.+||+|||+++........ .....||+.|+|| |...+. .++.++|||||||++|||+|
T Consensus 183 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~~~~~~~Di~slG~il~el~t 252 (342)
T 1b6c_B 183 NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP----------EVLDDSINMKHFESFKRADIYAMGLVFWEIAR 252 (342)
T ss_dssp TSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCH----------HHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCceeccccccccccccccCCcCcccCCH----------hhhcccccccccccCCcccHHHHHHHHHHHHh
Confidence 999999999999877654322 2345799999999 555443 34478999999999999999
Q ss_pred C----------CCCCCccccccCCCcchhhhhhhhccCCCC--CCCh-hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 718 G----------KHPGDFLSLFSSSSSSINIEFNAMLDHRLP--HPSL-DVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 718 g----------~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
| ..||...... ..........+...... .+.. ...+....+.+++.+||+.||++|||+.||++
T Consensus 253 g~~~~~~~~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~ 329 (342)
T 1b6c_B 253 RCSIGGIHEDYQLPYYDLVPS---DPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 329 (342)
T ss_dssp TBCBTTBCCCCCCTTTTTSCS---SCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred ccCcCCcccccccCccccCcC---cccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 9 6676542211 11111112222222221 2211 12345567999999999999999999999998
Q ss_pred hC
Q 047901 785 LL 786 (786)
Q Consensus 785 ~L 786 (786)
.|
T Consensus 330 ~L 331 (342)
T 1b6c_B 330 TL 331 (342)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 194
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=7.9e-40 Score=354.79 Aligned_cols=261 Identities=17% Similarity=0.210 Sum_probs=195.5
Q ss_pred hccCccceeeccccCceEEEEEcCC------CCEEEEEEcCCCCCCCch-------hhHHHHHHHHHHHhhcCCCcccce
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLPS------GDKIAVKKFNSPFPNDQM-------SDQKEFLNEIKALTKIRHRNIVKF 571 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~-------~~~~~~~~e~~~l~~l~hpniv~l 571 (786)
.++|++.+.||+|+||+||+|.+.. ++.||||++......... .....+..|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4579999999999999999998754 478999998652110000 001123445666778889999999
Q ss_pred eeEEecC----CeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeC-
Q 047901 572 YGFCSHV----RHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLD- 646 (786)
Q Consensus 572 ~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~- 646 (786)
++++... ...++||||+ +++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~ 187 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN--AKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNY 187 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEES
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEec
Confidence 9998764 4579999999 99999999764 35799999999999999999999999 999999999999999
Q ss_pred -CCCcEEEeccccceecCCCCC-------cceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhC
Q 047901 647 -LEYEARVSDFGTAKLLKPNSS-------NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKG 718 (786)
Q Consensus 647 -~~~~~kl~Dfg~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg 718 (786)
.++.+||+|||+|+.+..... ......||+.|+|| |.+.+..++.++|||||||++|||+||
T Consensus 188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~Di~slG~~l~el~~g 257 (364)
T 3op5_A 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSI----------DAHNGVAPSRRGDLEILGYCMIQWLTG 257 (364)
T ss_dssp SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCH----------HHHTTCCCCHHHHHHHHHHHHHHHHHS
T ss_pred CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCH----------HHhCCCCCCchhhHHHHHHHHHHHHhC
Confidence 889999999999987653321 11334699999999 888888899999999999999999999
Q ss_pred CCCCCccccccCCCc----chhhhhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 719 KHPGDFLSLFSSSSS----SINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 719 ~~Pf~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
+.||........... ..........+..+.. ...+..+.+++..||+.+|++|||+++|++.|
T Consensus 258 ~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l 324 (364)
T 3op5_A 258 HLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPA-----ANAPGEIAKYMETVKLLDYTEKPLYENLRDIL 324 (364)
T ss_dssp CCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCT-----TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHH
T ss_pred CCCccccccCHHHHHHHHHHhhhhHHHHHHHhccc-----ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 999874221000000 0000111111111110 01134589999999999999999999998764
No 195
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=6.7e-39 Score=340.75 Aligned_cols=255 Identities=22% Similarity=0.358 Sum_probs=202.7
Q ss_pred CccceeeccccCceEEEEEcC-----CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEec--CCe
Q 047901 508 FDAKYCIGKGEHRSVYRAKLP-----SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSH--VRH 580 (786)
Q Consensus 508 ~~~~~~ig~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~--~~~ 580 (786)
|+..+.||+|+||+||++.+. +++.||||++... ......+.+.+|+++++.++||||+++++++.+ ...
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD---AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAAS 109 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT---CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc---cChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCce
Confidence 489999999999999988642 5788999999753 233456789999999999999999999999987 467
Q ss_pred eeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccce
Q 047901 581 SFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAK 660 (786)
Q Consensus 581 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~ 660 (786)
.++||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 182 (318)
T 3lxp_A 110 LQLVMEYVPLGSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAK 182 (318)
T ss_dssp EEEEECCCTTCBHHHHGGGS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCE
T ss_pred EEEEEecccCCcHHHHHhhC----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccc
Confidence 89999999999999999754 489999999999999999999999 99999999999999999999999999999
Q ss_pred ecCCCCCc---ceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccc-----cCC-
Q 047901 661 LLKPNSSN---WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLF-----SSS- 731 (786)
Q Consensus 661 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~-----~~~- 731 (786)
........ .....+|..|+|| |...+..++.++||||||+++|||++|+.||...... ...
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~ 252 (318)
T 3lxp_A 183 AVPEGHEYYRVREDGDSPVFWYAP----------ECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQ 252 (318)
T ss_dssp ECCTTCSEEEC---CCCCGGGCCH----------HHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCC
T ss_pred cccccccccccccCCCCCceeeCh----------HHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccc
Confidence 87654322 2334678899999 7888888999999999999999999999997642210 000
Q ss_pred CcchhhhhhhhccCCC--CCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 732 SSSINIEFNAMLDHRL--PHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 732 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
...........+.... ..+.. .+..+.+++..||+.||++|||++|+++.|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~li~~~l~~dP~~Rps~~ell~~L 305 (318)
T 3lxp_A 253 GQMTVLRLTELLERGERLPRPDK----CPAEVYHLMKNCWETEASFRPTFENLIPIL 305 (318)
T ss_dssp HHHHHHHHHHHHHTTCCCCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred cchhHHHHHHHHhcccCCCCCcc----ccHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 0001111222222222 22222 234589999999999999999999999864
No 196
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=3.2e-39 Score=363.70 Aligned_cols=252 Identities=24% Similarity=0.357 Sum_probs=205.7
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|++.+.||+|+||+||+|+.. +++.||||++.... ........+.+|++++++++||||+++++++.+....++
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 98 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKAS--AKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHH--HBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEeccc--ccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEE
Confidence 457999999999999999999865 78999999985421 112245678999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeC---CCCcEEEeccccce
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLD---LEYEARVSDFGTAK 660 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~---~~~~~kl~Dfg~a~ 660 (786)
||||+++|+|.+++... +.+++..+..++.|++.||.|||+. +|+||||||+||+++ .++.+||+|||+|+
T Consensus 99 v~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 172 (486)
T 3mwu_A 99 VGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (486)
T ss_dssp EECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred EEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence 99999999999998764 5689999999999999999999999 999999999999995 45689999999998
Q ss_pred ecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhh
Q 047901 661 LLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFN 740 (786)
Q Consensus 661 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~ 740 (786)
..... .......||+.|+|| |+..+ .++.++||||+||++|+|++|+.||.... ......
T Consensus 173 ~~~~~-~~~~~~~gt~~y~aP----------E~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~~ 232 (486)
T 3mwu_A 173 CFQQN-TKMKDRIGTAYYIAP----------EVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN--------EYDILK 232 (486)
T ss_dssp TBCCC-----CCTTGGGGCCG----------GGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHH
T ss_pred ECCCC-CccCCCcCCCCCCCH----------HHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHH
Confidence 76543 233456899999999 55443 58999999999999999999999986432 223333
Q ss_pred hhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 741 AMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.+.......+...+...+..+.+++..||..||++|||+.|+++
T Consensus 233 ~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 233 RVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp HHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 44444444333333344556899999999999999999999986
No 197
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=5.8e-39 Score=357.85 Aligned_cols=258 Identities=20% Similarity=0.282 Sum_probs=195.8
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecC-----
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHV----- 578 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~----- 578 (786)
.++|+..+.||+|+||+||+|+.. +++.||||++.... ......+.+.+|+.+++.++||||+++++++...
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~ 138 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 138 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGG--GSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTT
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccc--cChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCcccc
Confidence 467999999999999999999854 68899999997532 2334567888999999999999999999999654
Q ss_pred -CeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccc
Q 047901 579 -RHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFG 657 (786)
Q Consensus 579 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg 657 (786)
...|+||||+++ ++.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 139 ~~~~~lv~E~~~~-~l~~~~~-----~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG 209 (464)
T 3ttj_A 139 FQDVYLVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 209 (464)
T ss_dssp CCEEEEEEECCSE-EHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCC
T ss_pred CCeEEEEEeCCCC-CHHHHHh-----hcCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEE
Confidence 457999999986 5777664 2488999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCC-----
Q 047901 658 TAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSS----- 732 (786)
Q Consensus 658 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~----- 732 (786)
+|+..... ......+||+.|+|| |++.+..++.++||||+||++|||++|+.||...+......
T Consensus 210 ~a~~~~~~-~~~~~~~gt~~y~aP----------E~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~ 278 (464)
T 3ttj_A 210 LARTAGTS-FMMTPYVVTRYYRAP----------EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 278 (464)
T ss_dssp CC-----C-CCC----CCCTTCCH----------HHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred eeeecCCC-cccCCCcccccccCH----------HHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 99876543 234556899999999 78888899999999999999999999999997543210000
Q ss_pred ---------cchhhhhhhhccCCCC----------------CCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 733 ---------SSINIEFNAMLDHRLP----------------HPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 733 ---------~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
..........+..... ............+.+++.+||..||++|||++|+++
T Consensus 279 lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 279 LGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp HCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000011111111111 111112223556899999999999999999999986
No 198
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=7.2e-39 Score=333.37 Aligned_cols=252 Identities=24% Similarity=0.334 Sum_probs=202.8
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|++.+.||+|+||.||+|+.. +++.||||++.... .....+.+.+|+.+++.++||||+++++++...+..++
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 82 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGG---CTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeecc---chhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEE
Confidence 467999999999999999999865 78999999986422 22345788999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecC
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK 663 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 663 (786)
||||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||.+....
T Consensus 83 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 156 (276)
T 2yex_A 83 FLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (276)
T ss_dssp EEECCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred EEEecCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccC
Confidence 99999999999998643 5689999999999999999999999 99999999999999999999999999998764
Q ss_pred CCC--CcceeeccCccccCCCCCCCCchHHHHhhhcCc-CcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhh
Q 047901 664 PNS--SNWTELVGTFGYVAPAHGNIGLHLAELAYTMKI-TEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFN 740 (786)
Q Consensus 664 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~-~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~ 740 (786)
... .......||+.|+|| |...+..+ +.++||||||+++|||++|+.||..... ......
T Consensus 157 ~~~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~ 219 (276)
T 2yex_A 157 YNNRERLLNKMCGTLPYVAP----------ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD-------SCQEYS 219 (276)
T ss_dssp ETTEECCBCCCCSCGGGCCG----------GGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCT-------TSHHHH
T ss_pred CCcchhcccCCccccCccCh----------HHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCch-------HHHHHH
Confidence 322 123445799999999 55555444 6789999999999999999999875321 011112
Q ss_pred hhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 741 AMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.........+. ....+..+.+++..||+.||++|||++|+++
T Consensus 220 ~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 220 DWKEKKTYLNP--WKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp HHHTTCTTSTT--GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HhhhcccccCc--hhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 22221111111 1223345889999999999999999999975
No 199
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.7e-39 Score=340.37 Aligned_cols=250 Identities=25% Similarity=0.399 Sum_probs=200.8
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|+..+.||+|+||.||+|... +++.||||++... ...+.+.+|+.+++.++||||+++++++...+..++
T Consensus 28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 101 (314)
T 3com_A 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE------SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI 101 (314)
T ss_dssp --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT------SCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch------HHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence 567999999999999999999865 6899999999752 123578899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecC
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK 663 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 663 (786)
||||+++|+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||.+....
T Consensus 102 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 176 (314)
T 3com_A 102 VMEYCGAGSVSDIIRLR--NKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLT 176 (314)
T ss_dssp EEECCTTEEHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECB
T ss_pred EeecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhh
Confidence 99999999999999743 35689999999999999999999999 99999999999999999999999999998876
Q ss_pred CCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhhc
Q 047901 664 PNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAML 743 (786)
Q Consensus 664 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 743 (786)
..........||+.|+|| |...+..++.++||||||+++|||++|+.||....... .........
T Consensus 177 ~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~~~~ 241 (314)
T 3com_A 177 DTMAKRNTVIGTPFWMAP----------EVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR-----AIFMIPTNP 241 (314)
T ss_dssp TTBSCBCCCCSCGGGCCH----------HHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH-----HHHHHHHSC
T ss_pred hhccccCccCCCCCccCh----------hhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH-----HHHHHhcCC
Confidence 544444556899999999 77777889999999999999999999999987432110 000001111
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 744 DHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 744 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
......+. ..+..+.+++..||..||++|||+.++++
T Consensus 242 ~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 242 PPTFRKPE----LWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp CCCCSSGG----GSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CcccCCcc----cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 11111111 12345889999999999999999999975
No 200
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-38 Score=335.99 Aligned_cols=250 Identities=24% Similarity=0.355 Sum_probs=198.3
Q ss_pred cCccceeeccccCceEEEEEcC-CC---CEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCee-
Q 047901 507 DFDAKYCIGKGEHRSVYRAKLP-SG---DKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHS- 581 (786)
Q Consensus 507 ~~~~~~~ig~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~- 581 (786)
.|...+.||+|+||+||+|++. ++ ..||+|++.. .......+.+.+|+.+++.++||||+++++++...+..
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~---~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSR---ITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLP 98 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETT---CCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccc---cccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCc
Confidence 5667789999999999999853 22 2699999865 23344567899999999999999999999999766555
Q ss_pred eEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEecccccee
Q 047901 582 FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKL 661 (786)
Q Consensus 582 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~ 661 (786)
++||||+.+|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 99 ~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 173 (298)
T 3pls_A 99 HVLLPYMCHGDLLQFIRSP--QRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARD 173 (298)
T ss_dssp EEEECCCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCT
T ss_pred EEEEecccCCCHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCccc
Confidence 9999999999999999763 35689999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCC----CcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCC-CCccccccCCCcchh
Q 047901 662 LKPNS----SNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP-GDFLSLFSSSSSSIN 736 (786)
Q Consensus 662 ~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~P-f~~~~~~~~~~~~~~ 736 (786)
..... .......+++.|+|| |...+..+++++||||||+++|||++|..| |..... .
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~--------~ 235 (298)
T 3pls_A 174 ILDREYYSVQQHRHARLPVKWTAL----------ESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP--------F 235 (298)
T ss_dssp TTTGGGGCSCCSSCTTCGGGGSCH----------HHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG--------G
T ss_pred ccCCcccccccCcCCCCCccccCh----------hhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH--------H
Confidence 64321 122345678999999 788888899999999999999999996555 432211 1
Q ss_pred hhhhhhccC-CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 737 IEFNAMLDH-RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 737 ~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
.....+... ....+... +..+.+++..||+.||.+|||+.++++.|
T Consensus 236 ~~~~~~~~~~~~~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~ll~~l 282 (298)
T 3pls_A 236 DLTHFLAQGRRLPQPEYC----PDSLYQVMQQCWEADPAVRPTFRVLVGEV 282 (298)
T ss_dssp GHHHHHHTTCCCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHHhhcCCCCCCCccc----hHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 111111111 12222222 23588999999999999999999999864
No 201
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-39 Score=350.76 Aligned_cols=256 Identities=22% Similarity=0.273 Sum_probs=202.1
Q ss_pred hccCccceeeccccCceEEEEEc----CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhc-CCCcccceeeEEecCC
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKL----PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVR 579 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~ 579 (786)
.++|++.+.||+|+||+||+|+. .+++.||||++............+.+.+|+++++.+ .||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 35799999999999999999986 368899999986422111122334567899999999 6999999999999999
Q ss_pred eeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccc
Q 047901 580 HSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTA 659 (786)
Q Consensus 580 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a 659 (786)
..++||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a 206 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQR---ERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLS 206 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred eEEEEeecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCC
Confidence 999999999999999999764 4689999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCC-cceeeccCccccCCCCCCCCchHHHHhhh--cCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchh
Q 047901 660 KLLKPNSS-NWTELVGTFGYVAPAHGNIGLHLAELAYT--MKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSIN 736 (786)
Q Consensus 660 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~e~~~~--~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~ 736 (786)
+....... ......||+.|+|| |+..+ ..++.++|||||||++|||++|+.||..... .....
T Consensus 207 ~~~~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~----~~~~~ 272 (355)
T 1vzo_A 207 KEFVADETERAYDFCGTIEYMAP----------DIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGE----KNSQA 272 (355)
T ss_dssp EECCGGGGGGGCGGGSCCTTCCH----------HHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTS----CCCHH
T ss_pred eecccCCCCcccCcccCcCccCh----------hhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCc----cchHH
Confidence 87643322 23345799999999 66654 3478899999999999999999999864321 11112
Q ss_pred hhhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 047901 737 IEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRP-----TMQTVCQ 784 (786)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RP-----t~~ev~~ 784 (786)
.............+... +..+.+++.+||..||++|| |++|+++
T Consensus 273 ~~~~~~~~~~~~~~~~~----~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~ 321 (355)
T 1vzo_A 273 EISRRILKSEPPYPQEM----SALAKDLIQRLLMKDPKKRLGCGPRDADEIKE 321 (355)
T ss_dssp HHHHHHHHCCCCCCTTS----CHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred HHHHHHhccCCCCCccc----CHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHc
Confidence 22223333333333222 23488999999999999999 9999976
No 202
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.6e-39 Score=369.26 Aligned_cols=250 Identities=24% Similarity=0.427 Sum_probs=204.6
Q ss_pred hccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeEE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVV 584 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 584 (786)
.++|++.+.||+|+||+||+|++.++..||||++.... ...+.|.+|+++|++++||||+++++++.+ +..++|
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv 339 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 339 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-----CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEe
Confidence 46789999999999999999999888889999997522 234679999999999999999999999876 678999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecCC
Q 047901 585 YEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKP 664 (786)
Q Consensus 585 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 664 (786)
|||+++|+|.+++... ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 340 ~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 415 (535)
T 2h8h_A 340 TEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 415 (535)
T ss_dssp ECCCTTEEHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCC
T ss_pred eehhcCCcHHHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCC
Confidence 9999999999999753 224589999999999999999999999 999999999999999999999999999986643
Q ss_pred CCC-cceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCccccccCCCcchhhhhhhh
Q 047901 665 NSS-NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFLSLFSSSSSSINIEFNAM 742 (786)
Q Consensus 665 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~ 742 (786)
... ......++..|+|| |.+....++.++|||||||++|||++ |+.||..... .+....+
T Consensus 416 ~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~--------~~~~~~i 477 (535)
T 2h8h_A 416 NEYTARQGAKFPIKWTAP----------EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--------REVLDQV 477 (535)
T ss_dssp HHHHTTCSTTSCGGGSCH----------HHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH--------HHHHHHH
T ss_pred CceecccCCcCcccccCH----------HHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHH
Confidence 211 11233567899999 78888899999999999999999999 9999874321 1122222
Q ss_pred ccC-CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 743 LDH-RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 743 ~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
... +...+... +..+.++|..||+.||++|||+++|++.|
T Consensus 478 ~~~~~~~~~~~~----~~~l~~li~~cl~~dP~~RPt~~~l~~~L 518 (535)
T 2h8h_A 478 ERGYRMPCPPEC----PESLHDLMCQCWRKEPEERPTFEYLQAFL 518 (535)
T ss_dssp HTTCCCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HcCCCCCCCCCC----CHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 221 22333322 34588999999999999999999998864
No 203
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=5e-39 Score=373.77 Aligned_cols=252 Identities=21% Similarity=0.295 Sum_probs=211.9
Q ss_pred HhccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhc-CCCcccceeeEEecCCee
Q 047901 504 RTKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHS 581 (786)
Q Consensus 504 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~ 581 (786)
..++|++.+.||+|+||+||+|+.+ +++.||||++..... ......+.+..|..++..+ +||+|+++++++.+.+..
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~-~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~ 417 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVV-IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 417 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHH-HHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEecccc-ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEE
Confidence 4568999999999999999999865 678899999864210 0122345678899999988 699999999999999999
Q ss_pred eEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEecccccee
Q 047901 582 FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKL 661 (786)
Q Consensus 582 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~ 661 (786)
|+||||+++|+|.+++... +.+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|+.
T Consensus 418 ~lV~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~ 491 (674)
T 3pfq_A 418 YFVMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 491 (674)
T ss_dssp EEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEE
T ss_pred EEEEeCcCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeec
Confidence 9999999999999999864 5689999999999999999999999 999999999999999999999999999997
Q ss_pred cCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhh
Q 047901 662 LKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNA 741 (786)
Q Consensus 662 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 741 (786)
...........+||+.|+|| |++.+..++.++|||||||++|||++|+.||.... ..+....
T Consensus 492 ~~~~~~~~~~~~GT~~Y~AP----------E~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~--------~~~~~~~ 553 (674)
T 3pfq_A 492 NIWDGVTTKTFCGTPDYIAP----------EIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED--------EDELFQS 553 (674)
T ss_dssp CCCTTCCBCCCCSCSSSCCH----------HHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHH
T ss_pred cccCCcccccccCCCcccCH----------hhhcCCCCCccceEechHHHHHHHHcCCCCCCCCC--------HHHHHHH
Confidence 65444455667899999999 88888899999999999999999999999987432 3344555
Q ss_pred hccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCH-----HHHHH
Q 047901 742 MLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTM-----QTVCQ 784 (786)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~-----~ev~~ 784 (786)
+.......|.... ..+.+++..||.+||++||++ +||++
T Consensus 554 i~~~~~~~p~~~s----~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 554 IMEHNVAYPKSMS----KEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp HHSSCCCCCTTSC----HHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred HHhCCCCCCccCC----HHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 6666665554333 358899999999999999998 77654
No 204
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=6.1e-39 Score=340.99 Aligned_cols=261 Identities=23% Similarity=0.370 Sum_probs=207.6
Q ss_pred HHHHHHhccCccceeeccccCceEEEEEc------CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhc-CCCcccce
Q 047901 499 EEIIRRTKDFDAKYCIGKGEHRSVYRAKL------PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKF 571 (786)
Q Consensus 499 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l 571 (786)
.++....++|++.+.||+|+||+||+|+. .+++.||||++... ......+.+.+|+.+++.+ +||||+++
T Consensus 20 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 20 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG---ATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT---CCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred cceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccC---CCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 34444567899999999999999999973 35678999999753 2334556889999999999 69999999
Q ss_pred eeEEecCC-eeeEEEeccCCCCHHHHhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcC
Q 047901 572 YGFCSHVR-HSFVVYEYINRGSLATVLSNNFA-------------SEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRD 637 (786)
Q Consensus 572 ~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrd 637 (786)
++++...+ ..++||||+++|+|.+++..... ...+++..+..++.|++.||.|||+. +|+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Cccccc
Confidence 99987654 58999999999999999986532 12378999999999999999999999 999999
Q ss_pred CCCCceeeCCCCcEEEeccccceecCCCCCc--ceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHH
Q 047901 638 ISSNNVLLDLEYEARVSDFGTAKLLKPNSSN--WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEV 715 (786)
Q Consensus 638 lk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~el 715 (786)
|||+||+++.++.+||+|||+++........ .....||+.|+|| |...+..++.++||||||+++|||
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aP----------E~~~~~~~~~~~Di~slG~il~~l 243 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP----------ETIFDRVYTIQSDVWSFGVLLWEI 243 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCH----------HHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCc----------hhhccccccchhHHHHHHHHHHHH
Confidence 9999999999999999999999876543322 2345688999999 788888899999999999999999
Q ss_pred Hh-CCCCCCccccccCCCcchhhhhhhhccC-CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 716 IK-GKHPGDFLSLFSSSSSSINIEFNAMLDH-RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 716 lt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
+| |+.||..... .......+... ....+... +..+.+++..||+.||++|||+.|+++.|
T Consensus 244 ~t~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~ell~~L 305 (316)
T 2xir_A 244 FSLGASPYPGVKI-------DEEFCRRLKEGTRMRAPDYT----TPEMYQTMLDCWHGEPSQRPTFSELVEHL 305 (316)
T ss_dssp HTTSCCSSTTCCC-------SHHHHHHHHHTCCCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HhCCCCCCcccch-------hHHHHHHhccCccCCCCCCC----CHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 98 9999864321 11111111111 12222222 23488999999999999999999999864
No 205
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=5.5e-39 Score=337.90 Aligned_cols=255 Identities=17% Similarity=0.250 Sum_probs=198.5
Q ss_pred hccCccceeeccccCceEEEEEc-CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEE-ecCCeee
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFC-SHVRHSF 582 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~-~~~~~~~ 582 (786)
.++|+..+.||+|+||+||+|+. .+++.||||++..... .+.+.+|+++++.++|++++..++++ ...+..+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (296)
T 4hgt_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK------HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 81 (296)
T ss_dssp ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEE
T ss_pred CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc------chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceE
Confidence 56899999999999999999985 5788999998754221 23477899999999988877777665 6677889
Q ss_pred EEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceee---CCCCcEEEeccccc
Q 047901 583 VVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLL---DLEYEARVSDFGTA 659 (786)
Q Consensus 583 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill---~~~~~~kl~Dfg~a 659 (786)
+||||+ +++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++
T Consensus 82 lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a 155 (296)
T 4hgt_A 82 MVMELL-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155 (296)
T ss_dssp EEEECC-CCBHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTC
T ss_pred EEEEcc-CCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccc
Confidence 999999 89999999753 35689999999999999999999999 99999999999999 78899999999999
Q ss_pred eecCCCCC-------cceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCC
Q 047901 660 KLLKPNSS-------NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSS 732 (786)
Q Consensus 660 ~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~ 732 (786)
+....... ......||+.|+|| |...+..++.++|||||||++|||++|+.||.........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~- 224 (296)
T 4hgt_A 156 KKYRDARTHQHIPYRENKNLTGTARYASI----------NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR- 224 (296)
T ss_dssp EECBCTTTCCBCCCCCSCCCCSCGGGCCH----------HHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS-
T ss_pred eeccCcccCccCCCCcccccCCCccccch----------HHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhh-
Confidence 88764432 12345799999999 7888888999999999999999999999999754322111
Q ss_pred cchhhhhhhhccCCCCCCCh-hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 733 SSINIEFNAMLDHRLPHPSL-DVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
.............+.. .....+..+.+++..||+.||++|||++++++.|
T Consensus 225 ----~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l 275 (296)
T 4hgt_A 225 ----QKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLF 275 (296)
T ss_dssp ----SHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHH
T ss_pred ----hhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHH
Confidence 1111111111111100 0011234589999999999999999999999864
No 206
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=8e-39 Score=368.71 Aligned_cols=249 Identities=22% Similarity=0.324 Sum_probs=197.3
Q ss_pred cCccce-eeccccCceEEEEEcC---CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeee
Q 047901 507 DFDAKY-CIGKGEHRSVYRAKLP---SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSF 582 (786)
Q Consensus 507 ~~~~~~-~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~ 582 (786)
++...+ .||+|+||+||+|.++ ++..||||+++.. ......+.|.+|++++++++|||||++++++.. +..+
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~ 411 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG---TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALM 411 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCC---CSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEE
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCC---CChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeE
Confidence 344444 7999999999999753 4567999999753 223456789999999999999999999999976 5689
Q ss_pred EEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceec
Q 047901 583 VVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLL 662 (786)
Q Consensus 583 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~ 662 (786)
+||||+++|+|.+++... ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+..
T Consensus 412 lv~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~ 486 (613)
T 2ozo_A 412 LVMEMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKAL 486 (613)
T ss_dssp EEEECCTTCBHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTC
T ss_pred EEEEeCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccc
Confidence 999999999999999754 45689999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCcc---eeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCccccccCCCcchhhh
Q 047901 663 KPNSSNW---TELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFLSLFSSSSSSINIE 738 (786)
Q Consensus 663 ~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~ 738 (786)
....... ....+++.|+|| |++....++.++|||||||++|||++ |+.||..... .+.
T Consensus 487 ~~~~~~~~~~~~~~~~~~y~AP----------E~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~--------~~~ 548 (613)
T 2ozo_A 487 GADDSYYTARSAGKWPLKWYAP----------ECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--------PEV 548 (613)
T ss_dssp C--------------CCTTSCH----------HHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS--------HHH
T ss_pred cCCCceeeeccCCCCccceeCH----------hhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH--------HHH
Confidence 5432211 223456899999 88888899999999999999999998 9999875331 111
Q ss_pred hhhhccC-CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 739 FNAMLDH-RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 739 ~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
...+... +...|... +..+.++|..||+.||++|||+.+|++.|
T Consensus 549 ~~~i~~~~~~~~p~~~----~~~l~~li~~cl~~dP~~RPs~~~l~~~L 593 (613)
T 2ozo_A 549 MAFIEQGKRMECPPEC----PPELYALMSDCWIYKWEDRPDFLTVEQRM 593 (613)
T ss_dssp HHHHHTTCCCCCCTTC----CHHHHHHHHHTTCSSTTTSCCHHHHHHHH
T ss_pred HHHHHcCCCCCCCCcC----CHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 2222222 23333322 34589999999999999999999998764
No 207
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.2e-38 Score=338.21 Aligned_cols=256 Identities=23% Similarity=0.361 Sum_probs=194.8
Q ss_pred HhccCccceeeccccCceEEEEEcC----CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCC
Q 047901 504 RTKDFDAKYCIGKGEHRSVYRAKLP----SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVR 579 (786)
Q Consensus 504 ~~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~ 579 (786)
..++|...+.||+|+||+||+|+.. .+..||||++.... ......+.+.+|+.++++++||||+++++++...+
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 109 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDN--SSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---C--CCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC--
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccc--cchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecc
Confidence 3568999999999999999999753 34479999987532 23345678999999999999999999999997654
Q ss_pred -----eeeEEEeccCCCCHHHHhhcC---CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcE
Q 047901 580 -----HSFVVYEYINRGSLATVLSNN---FASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEA 651 (786)
Q Consensus 580 -----~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~ 651 (786)
..++||||+++|+|.+++... .....+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+
T Consensus 110 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~ 186 (313)
T 3brb_A 110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTV 186 (313)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCE
T ss_pred ccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcE
Confidence 349999999999999998532 1345689999999999999999999999 99999999999999999999
Q ss_pred EEeccccceecCCCCC--cceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCccccc
Q 047901 652 RVSDFGTAKLLKPNSS--NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFLSLF 728 (786)
Q Consensus 652 kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~~~~ 728 (786)
||+|||+++....... ......+++.|+|| |...+..+++++||||||+++|||++ |..||.....
T Consensus 187 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~- 255 (313)
T 3brb_A 187 CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI----------ESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN- 255 (313)
T ss_dssp EECSCSCC----------------CCGGGSCH----------HHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG-
T ss_pred EEeecCcceecccccccCcccccCCCccccCc----------hhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCH-
Confidence 9999999987654322 12334678899999 78888889999999999999999999 8899864321
Q ss_pred cCCCcchhhhhhhhccC-CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 729 SSSSSSINIEFNAMLDH-RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 729 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
......+... +...+.. .+..+.+++..||..||++|||+.++++.|
T Consensus 256 -------~~~~~~~~~~~~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~l~~~L 303 (313)
T 3brb_A 256 -------HEMYDYLLHGHRLKQPED----CLDELYEIMYSCWRTDPLDRPTFSVLRLQL 303 (313)
T ss_dssp -------GGHHHHHHTTCCCCCBTT----CCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred -------HHHHHHHHcCCCCCCCcc----ccHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 1122222222 2222222 233589999999999999999999998864
No 208
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=7e-39 Score=358.46 Aligned_cols=194 Identities=25% Similarity=0.374 Sum_probs=155.2
Q ss_pred ccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEec-----CC
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSH-----VR 579 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~-----~~ 579 (786)
++|++.+.||+|+||+||+|+.. +++.||||++.... ......+.+.+|+++++.++||||+++++++.. ..
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 130 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVF--EDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD 130 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhh--cCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence 57999999999999999999865 78999999996532 334556789999999999999999999999843 35
Q ss_pred eeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccc
Q 047901 580 HSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTA 659 (786)
Q Consensus 580 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a 659 (786)
..|+||||+. |+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|
T Consensus 131 ~~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 131 ELYVVLEIAD-SDFKKLFRTP---VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp CEEEEECCCS-EEHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEeccc-cchhhhcccC---CCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccc
Confidence 7899999985 6999999753 5699999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCC---------------------------cceeeccCccccCCCCCCCCchHHHHh-hhcCcCcccchHHHHHH
Q 047901 660 KLLKPNSS---------------------------NWTELVGTFGYVAPAHGNIGLHLAELA-YTMKITEKCDVYSFGVL 711 (786)
Q Consensus 660 ~~~~~~~~---------------------------~~~~~~gt~~y~aPE~~~~~~~~~e~~-~~~~~~~~sDvwslGvi 711 (786)
+....... .....+||+.|+|| |++ ....++.++|||||||+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aP----------E~~~~~~~~~~~~DiwSlG~i 273 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAP----------ELILLQENYTEAIDVWSIGCI 273 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCH----------HHHTTCCCCCTHHHHHHHHHH
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccCh----------HHhhCCCCCCcHhHHHHHHHH
Confidence 87653211 22345789999999 654 55679999999999999
Q ss_pred HHHHHhC
Q 047901 712 ALEVIKG 718 (786)
Q Consensus 712 l~elltg 718 (786)
+|||++|
T Consensus 274 l~elltg 280 (458)
T 3rp9_A 274 FAELLNM 280 (458)
T ss_dssp HHHHHTT
T ss_pred HHHHHHh
Confidence 9999993
No 209
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.3e-38 Score=333.68 Aligned_cols=246 Identities=22% Similarity=0.360 Sum_probs=199.7
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhc-CCCcccceeeEEecCCeee
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSF 582 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~ 582 (786)
.++|+..+.||+|+||+||+|+.. +++.||||++..... .......+.+|+.++..+ +||||+++++++.+.+..+
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~ 87 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLA--GSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHML 87 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCT--TSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEeccccc--ccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEE
Confidence 567999999999999999999865 789999999976432 233456788999999999 8999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcCCC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCC-------------
Q 047901 583 VVYEYINRGSLATVLSNNFA-SEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLE------------- 648 (786)
Q Consensus 583 lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~------------- 648 (786)
+||||+++|+|.+++..... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~ 164 (289)
T 1x8b_A 88 IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDED 164 (289)
T ss_dssp EEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC---------------
T ss_pred EEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccc
Confidence 99999999999999975421 25689999999999999999999999 99999999999999844
Q ss_pred ------CcEEEeccccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhc-CcCcccchHHHHHHHHHHHhCCCC
Q 047901 649 ------YEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTM-KITEKCDVYSFGVLALEVIKGKHP 721 (786)
Q Consensus 649 ------~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~-~~~~~sDvwslGvil~elltg~~P 721 (786)
..+||+|||.+....... ...||+.|+|| |...+. .+++++|||||||++|||++|.+|
T Consensus 165 ~~~~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~aP----------E~~~~~~~~~~~~Di~slG~il~~l~~~~~~ 230 (289)
T 1x8b_A 165 DWASNKVMFKIGDLGHVTRISSPQ----VEEGDSRFLAN----------EVLQENYTHLPKADIFALALTVVCAAGAEPL 230 (289)
T ss_dssp -----CCCEEECCCTTCEETTCSC----CCCCCGGGCCH----------HHHTTCCTTHHHHHHHHHHHHHHHHTTCCCC
T ss_pred cccCCceEEEEcccccccccCCcc----ccCCCccccCh----------hHhcCCCCCCchhhHHHHHHHHHHHhcCCCC
Confidence 479999999998876432 24699999999 665544 566899999999999999999988
Q ss_pred CCccccccCCCcchhhhhhhhccCCCC-CCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 722 GDFLSLFSSSSSSINIEFNAMLDHRLP-HPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 722 f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
+.... ....+.....+ .+... +..+.+++..||+.||++|||+.|+++
T Consensus 231 ~~~~~-----------~~~~~~~~~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 231 PRNGD-----------QWHEIRQGRLPRIPQVL----SQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp CSSSH-----------HHHHHHTTCCCCCSSCC----CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred Ccchh-----------HHHHHHcCCCCCCCccc----CHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 54321 12222222222 22222 235889999999999999999999986
No 210
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.5e-38 Score=333.81 Aligned_cols=251 Identities=24% Similarity=0.353 Sum_probs=200.5
Q ss_pred hccCccce-eeccccCceEEEEEc---CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCe
Q 047901 505 TKDFDAKY-CIGKGEHRSVYRAKL---PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRH 580 (786)
Q Consensus 505 ~~~~~~~~-~ig~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~ 580 (786)
.++|++.+ .||+|+||+||+|.+ .+++.||||++.... ......+.+.+|+++++.++||||+++++++ ..+.
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~ 91 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA--NDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAES 91 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSS
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccc--cCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCC
Confidence 45788887 999999999999953 246789999997532 2233467899999999999999999999999 5567
Q ss_pred eeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccce
Q 047901 581 SFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAK 660 (786)
Q Consensus 581 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~ 660 (786)
.++||||+++++|.+++... +.+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 92 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 165 (291)
T 1xbb_A 92 WMLVMEMAELGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSK 165 (291)
T ss_dssp EEEEEECCTTEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred cEEEEEeCCCCCHHHHHHhC---cCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcce
Confidence 89999999999999999864 4689999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCCcc---eeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCccccccCCCcchh
Q 047901 661 LLKPNSSNW---TELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFLSLFSSSSSSIN 736 (786)
Q Consensus 661 ~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~ 736 (786)
......... ....+++.|+|| |...+..++.++||||||+++|||++ |+.||..... .
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~ 227 (291)
T 1xbb_A 166 ALRADENYYKAQTHGKWPVKWYAP----------ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--------S 227 (291)
T ss_dssp ECCTTCSEEEC----CCCGGGCCH----------HHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH--------H
T ss_pred eeccCCCcccccccCCCCceeeCh----------HHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH--------H
Confidence 876543321 223467899999 77778889999999999999999999 9999874321 1
Q ss_pred hhhhhhccC-CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 737 IEFNAMLDH-RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 737 ~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
.....+... +...+.. .+..+.+++..||+.||++|||+.++++.|
T Consensus 228 ~~~~~~~~~~~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~l~~~L 274 (291)
T 1xbb_A 228 EVTAMLEKGERMGCPAG----CPREMYDLMNLCWTYDVENRPGFAAVELRL 274 (291)
T ss_dssp HHHHHHHTTCCCCCCTT----CCHHHHHHHHHHTCSSTTTSCCHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 111112121 1222222 234589999999999999999999999864
No 211
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1e-38 Score=340.88 Aligned_cols=254 Identities=24% Similarity=0.351 Sum_probs=200.8
Q ss_pred hccCccceeeccccCceEEEEEc------CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecC
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKL------PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHV 578 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~ 578 (786)
.++|++.+.||+|+||+||+|++ .+++.||||++... ........+.+|+.++++++||||+++++++...
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 105 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV---CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 105 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSS---CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccc---cchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCC
Confidence 46799999999999999999984 24678999999642 2334566889999999999999999999999999
Q ss_pred CeeeEEEeccCCCCHHHHhhcCCC----CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCC---CCcE
Q 047901 579 RHSFVVYEYINRGSLATVLSNNFA----SEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDL---EYEA 651 (786)
Q Consensus 579 ~~~~lv~e~~~~g~L~~~l~~~~~----~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~---~~~~ 651 (786)
+..++||||+++|+|.+++..... ...+++..++.++.|++.||.|||+. +|+||||||+||+++. +..+
T Consensus 106 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~ 182 (327)
T 2yfx_A 106 LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA 182 (327)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCE
T ss_pred CCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceE
Confidence 999999999999999999986532 24589999999999999999999999 9999999999999984 4569
Q ss_pred EEeccccceecCCCCC--cceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCccccc
Q 047901 652 RVSDFGTAKLLKPNSS--NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFLSLF 728 (786)
Q Consensus 652 kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~~~~ 728 (786)
||+|||+++....... ......||+.|+|| |...+..++.++||||||+++|||+| |+.||....
T Consensus 183 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~-- 250 (327)
T 2yfx_A 183 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPP----------EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-- 250 (327)
T ss_dssp EECCCHHHHHHHC------CCGGGSCGGGCCH----------HHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--
T ss_pred EECccccccccccccccccCCCcCCCcceeCH----------hHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcC--
Confidence 9999999986543322 22345688999999 77888889999999999999999998 999986422
Q ss_pred cCCCcchhhhhhhhccCC-CCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 729 SSSSSSINIEFNAMLDHR-LPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
.......+.... ...+.. .+..+.+++..||+.||++|||+.|+++.|
T Consensus 251 ------~~~~~~~~~~~~~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~~l 299 (327)
T 2yfx_A 251 ------NQEVLEFVTSGGRMDPPKN----CPGPVYRIMTQCWQHQPEDRPNFAIILERI 299 (327)
T ss_dssp ------HHHHHHHHHTTCCCCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred ------HHHHHHHHhcCCCCCCCCC----CCHHHHHHHHHHhcCChhhCcCHHHHHHHH
Confidence 111222222221 122222 223588999999999999999999999763
No 212
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=2.2e-38 Score=333.70 Aligned_cols=255 Identities=21% Similarity=0.328 Sum_probs=207.0
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCC-----chhhHHHHHHHHHHHhhcC-CCcccceeeEEec
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPND-----QMSDQKEFLNEIKALTKIR-HRNIVKFYGFCSH 577 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~~~~e~~~l~~l~-hpniv~l~~~~~~ 577 (786)
.++|+..+.||+|+||.||+|+.. +++.||||++....... .....+.+.+|+++++++. ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 467999999999999999999865 68899999987532111 1123567889999999996 9999999999999
Q ss_pred CCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccc
Q 047901 578 VRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFG 657 (786)
Q Consensus 578 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg 657 (786)
.+..++||||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 169 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEK---VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFG 169 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred CCeEEEEEeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEeccc
Confidence 99999999999999999999764 5689999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCcceeeccCccccCCCCCCCCchHHHHhh------hcCcCcccchHHHHHHHHHHHhCCCCCCccccccCC
Q 047901 658 TAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAY------TMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSS 731 (786)
Q Consensus 658 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~------~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~ 731 (786)
.+....... ......|++.|+|| |... ...++.++||||||+++|||++|+.||....
T Consensus 170 ~~~~~~~~~-~~~~~~~~~~y~aP----------E~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~----- 233 (298)
T 1phk_A 170 FSCQLDPGE-KLREVCGTPSYLAP----------EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK----- 233 (298)
T ss_dssp TCEECCTTC-CBCCCCSCGGGCCH----------HHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----
T ss_pred chhhcCCCc-ccccccCCccccCH----------HHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc-----
Confidence 998775432 23445799999999 5553 4568899999999999999999999986422
Q ss_pred CcchhhhhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 732 SSSINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.......+.......+.......+..+.+++..||+.||++|||+.|+++
T Consensus 234 ---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 234 ---QMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp ---HHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred ---HHHHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 12222333333333222222334456899999999999999999999975
No 213
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=6.3e-39 Score=333.85 Aligned_cols=249 Identities=24% Similarity=0.354 Sum_probs=195.0
Q ss_pred ccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeEE
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVV 584 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 584 (786)
++|.+.+.||+|+||.||+|+.. +++.||||++.... .......+.+.+|+++++.++||||+++++++...+..++|
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQK-IRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH-HHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEecccc-ccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 57999999999999999999865 78999999985411 01122356788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecCC
Q 047901 585 YEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKP 664 (786)
Q Consensus 585 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 664 (786)
|||+++++|.+++... +.+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 90 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 163 (276)
T 2h6d_A 90 MEYVSGGELFDYICKH---GRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163 (276)
T ss_dssp EECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred EeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCC
Confidence 9999999999999764 4689999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCcceeeccCccccCCCCCCCCchHHHHhhhcCc-CcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhhc
Q 047901 665 NSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKI-TEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAML 743 (786)
Q Consensus 665 ~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~-~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 743 (786)
.. ......|++.|+|| |...+..+ +.++||||||+++|+|++|+.||.... .......+.
T Consensus 164 ~~-~~~~~~~~~~y~aP----------E~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--------~~~~~~~~~ 224 (276)
T 2h6d_A 164 GE-FLRTSCGSPNYAAP----------EVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH--------VPTLFKKIR 224 (276)
T ss_dssp --------------CCT----------GGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHH
T ss_pred Cc-ceecccCCccccCH----------HHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc--------HHHHHHHhh
Confidence 32 23345789999999 55555444 689999999999999999999986422 112222233
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 744 DHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 744 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
......+... ...+.+++..||+.||++|||++|+++
T Consensus 225 ~~~~~~~~~~----~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 225 GGVFYIPEYL----NRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp HCCCCCCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cCcccCchhc----CHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 3333333322 234889999999999999999999986
No 214
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=3e-39 Score=341.05 Aligned_cols=252 Identities=22% Similarity=0.361 Sum_probs=197.9
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|++.+.||+|+||+||+|+.. +++.||+|++... .....+.+.+|+++++.++||||+++++++...+..++
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 93 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK----SEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWI 93 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC--------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCC----CHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEE
Confidence 457999999999999999999875 5889999998652 23345788999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecC
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK 663 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 663 (786)
||||+++++|.+++... ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 94 v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (302)
T 2j7t_A 94 MIEFCPGGAVDAIMLEL--DRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNL 168 (302)
T ss_dssp EEECCTTEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHH
T ss_pred EEEeCCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccc
Confidence 99999999999998753 35689999999999999999999999 99999999999999999999999999986432
Q ss_pred CCCCcceeeccCccccCCCCCCCCchHHHHh-----hhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhh
Q 047901 664 PNSSNWTELVGTFGYVAPAHGNIGLHLAELA-----YTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIE 738 (786)
Q Consensus 664 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~-----~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~ 738 (786)
..........||+.|+|| |.. ....++.++||||||+++|||++|+.||..... ...
T Consensus 169 ~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~ 230 (302)
T 2j7t_A 169 KTLQKRDSFIGTPYWMAP----------EVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP--------MRV 230 (302)
T ss_dssp HHHHC-----CCGGGCCH----------HHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH--------HHH
T ss_pred ccccccccccCChhhcCC----------eeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH--------HHH
Confidence 221122345799999999 555 356788999999999999999999999874321 111
Q ss_pred hhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 739 FNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
............ ......+..+.+++..||+.||++|||+.++++
T Consensus 231 ~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 231 LLKIAKSDPPTL-LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp HHHHHHSCCCCC-SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred HHHHhccCCccc-CCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 122222211110 011122345889999999999999999999975
No 215
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.6e-38 Score=343.06 Aligned_cols=262 Identities=22% Similarity=0.285 Sum_probs=198.1
Q ss_pred hccCccceeeccccCceEEEEEc-CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEec------
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSH------ 577 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~------ 577 (786)
.++|++.+.||+|+||+||+|+. .+++.||||++..... .......+.+|+++++.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 93 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE--KEGFPITALREIKILQLLKHENVVNLIEICRTKASPYN 93 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSC--SSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-----
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccc--cccchHHHHHHHHHHHhccCCCcccHhheeeccccccc
Confidence 35799999999999999999986 4789999999866432 22234567899999999999999999999876
Q ss_pred --CCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEec
Q 047901 578 --VRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSD 655 (786)
Q Consensus 578 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~D 655 (786)
.+..++||||+++ +|.+.+... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 94 ~~~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~D 167 (351)
T 3mi9_A 94 RCKGSIYLVFDFCEH-DLAGLLSNV--LVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLAD 167 (351)
T ss_dssp ---CEEEEEEECCSE-EHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred cCCceEEEEEeccCC-CHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEcc
Confidence 4568999999985 888877654 35689999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCC----CcceeeccCccccCCCCCCCCchHHHHhhh-cCcCcccchHHHHHHHHHHHhCCCCCCccccccC
Q 047901 656 FGTAKLLKPNS----SNWTELVGTFGYVAPAHGNIGLHLAELAYT-MKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSS 730 (786)
Q Consensus 656 fg~a~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~-~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~ 730 (786)
||+|+...... .......||+.|+|| |...+ ..++.++|||||||++|||++|+.||........
T Consensus 168 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~ 237 (351)
T 3mi9_A 168 FGLARAFSLAKNSQPNRYTNRVVTLWYRPP----------ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ 237 (351)
T ss_dssp CTTCEECCCCSSSSCCCCCSSCSCGGGCCH----------HHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred chhcccccccccccccccCCcccccCccCc----------hhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 99998765321 223445789999999 66654 4589999999999999999999999875321000
Q ss_pred ----------CC-----cchhhhhhhhccCCCCCCChhHHH-----HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 731 ----------SS-----SSINIEFNAMLDHRLPHPSLDVQE-----KLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 731 ----------~~-----~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.. ........................ ....+.+++.+||+.||++|||++|+++
T Consensus 238 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 238 LALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp HHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 00 000000000000000000000000 1245889999999999999999999986
No 216
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=335.71 Aligned_cols=253 Identities=21% Similarity=0.277 Sum_probs=200.0
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEE--ecCCee
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFC--SHVRHS 581 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~--~~~~~~ 581 (786)
.++|++.+.||+|+||.||+|... +++.||||++............+.+.+|+++++.++||||+++++++ ......
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 468999999999999999999865 68899999986421111123456899999999999999999999998 445678
Q ss_pred eEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEecccccee
Q 047901 582 FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKL 661 (786)
Q Consensus 582 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~ 661 (786)
++||||++++ |.+++... ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||.+..
T Consensus 84 ~lv~e~~~~~-l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSV-PEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEECCSEE-HHHHHHHS-TTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEehhccCC-HHHHHHhC-cccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccc
Confidence 9999999886 77777654 346789999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCC--CcceeeccCccccCCCCCCCCchHHHHhhhcC--cCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhh
Q 047901 662 LKPNS--SNWTELVGTFGYVAPAHGNIGLHLAELAYTMK--ITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINI 737 (786)
Q Consensus 662 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~--~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~ 737 (786)
..... .......||+.|+|| |...+.. ++.++||||||+++|||++|+.||.... ...
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~ 220 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPP----------EIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN--------IYK 220 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCH----------HHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS--------HHH
T ss_pred cCccccccccccCCCCCCCcCh----------hhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch--------HHH
Confidence 75432 222345799999999 6665433 4779999999999999999999987432 122
Q ss_pred hhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 738 EFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
....+.......+.... ..+.+++.+||+.||++|||++|+++
T Consensus 221 ~~~~i~~~~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~ 263 (305)
T 2wtk_C 221 LFENIGKGSYAIPGDCG----PPLSDLLKGMLEYEPAKRFSIRQIRQ 263 (305)
T ss_dssp HHHHHHHCCCCCCSSSC----HHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHHhcCCCCCCCccC----HHHHHHHHHHccCChhhCCCHHHHhc
Confidence 22333333333333322 34889999999999999999999986
No 217
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.2e-38 Score=340.46 Aligned_cols=252 Identities=23% Similarity=0.401 Sum_probs=199.6
Q ss_pred ccCccceeeccccCceEEEEEcC-CCCE--EEEEEcCCCCCCCchhhHHHHHHHHHHHhhc-CCCcccceeeEEecCCee
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKLP-SGDK--IAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHS 581 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~--vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~ 581 (786)
++|+..+.||+|+||.||+|+.. ++.. ||||++.... .....+.+.+|+++++++ +||||+++++++.+.+..
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 101 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA---SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 101 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC---------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc---chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCce
Confidence 57999999999999999999865 4554 4999886422 223445788999999999 899999999999999999
Q ss_pred eEEEeccCCCCHHHHhhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCC
Q 047901 582 FVVYEYINRGSLATVLSNNF-------------ASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLE 648 (786)
Q Consensus 582 ~lv~e~~~~g~L~~~l~~~~-------------~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~ 648 (786)
++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~ 178 (327)
T 1fvr_A 102 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGEN 178 (327)
T ss_dssp EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGG
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCC
Confidence 99999999999999997642 234789999999999999999999999 99999999999999999
Q ss_pred CcEEEeccccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCcccc
Q 047901 649 YEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFLSL 727 (786)
Q Consensus 649 ~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~~~ 727 (786)
+.+||+|||+++..... .......+++.|+|| |...+..++.++|||||||++|||++ |+.||.....
T Consensus 179 ~~~kL~Dfg~~~~~~~~-~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~ 247 (327)
T 1fvr_A 179 YVAKIADFGLSRGQEVY-VKKTMGRLPVRWMAI----------ESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC 247 (327)
T ss_dssp GCEEECCTTCEESSCEE-CCC----CCTTTCCH----------HHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH
T ss_pred CeEEEcccCcCcccccc-ccccCCCCCccccCh----------hhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH
Confidence 99999999999754321 112334678899999 77788889999999999999999998 9999874321
Q ss_pred ccCCCcchhhhhhhhccC-CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 728 FSSSSSSINIEFNAMLDH-RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
......+... +...+... +..+.+++.+||..||++|||++|+++.|
T Consensus 248 --------~~~~~~~~~~~~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~ell~~L 295 (327)
T 1fvr_A 248 --------AELYEKLPQGYRLEKPLNC----DDEVYDLMRQCWREKPYERPSFAQILVSL 295 (327)
T ss_dssp --------HHHHHHGGGTCCCCCCTTB----CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred --------HHHHHHhhcCCCCCCCCCC----CHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 1122222222 12222222 23588999999999999999999998764
No 218
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=8e-39 Score=336.67 Aligned_cols=255 Identities=17% Similarity=0.258 Sum_probs=200.9
Q ss_pred hccCccceeeccccCceEEEEEc-CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEE-ecCCeee
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFC-SHVRHSF 582 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~-~~~~~~~ 582 (786)
.++|+..+.||+|+||+||+|+. .+++.||||++.... ..+.+.+|+.+++.++|++++..++++ ...+..+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT------KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 81 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS------SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc------chhHHHHHHHHHHHhhcCCCCCccccccCCCCceE
Confidence 45799999999999999999985 578999999986532 123578999999999998877766655 5677889
Q ss_pred EEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeC---CCCcEEEeccccc
Q 047901 583 VVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLD---LEYEARVSDFGTA 659 (786)
Q Consensus 583 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~---~~~~~kl~Dfg~a 659 (786)
+||||+ +++|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++ .++.+||+|||++
T Consensus 82 lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 155 (296)
T 3uzp_A 82 MVMELL-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155 (296)
T ss_dssp EEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTC
T ss_pred EEEEec-CCCHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCc
Confidence 999999 89999999753 35689999999999999999999999 999999999999994 7899999999999
Q ss_pred eecCCCCC-------cceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCC
Q 047901 660 KLLKPNSS-------NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSS 732 (786)
Q Consensus 660 ~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~ 732 (786)
+....... ......||+.|+|| |...+..++.++|||||||++|||++|+.||........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-- 223 (296)
T 3uzp_A 156 KKYRDARTHQHIPYRENKNLTGTARYASI----------NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK-- 223 (296)
T ss_dssp EECBCTTTCCBCCCCCSCCCCSCTTTCCH----------HHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSS--
T ss_pred ccccccccccccccccccccccccccCCh----------hhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhh--
Confidence 88765432 12345799999999 788888899999999999999999999999875432111
Q ss_pred cchhhhhhhhccCCCCCCC-hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 733 SSINIEFNAMLDHRLPHPS-LDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
......+.......+. ......+..+.+++..||+.||++|||+++|++.|
T Consensus 224 ---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l 275 (296)
T 3uzp_A 224 ---RQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLF 275 (296)
T ss_dssp ---SSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHH
T ss_pred ---hhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHH
Confidence 1111111111111110 00111234589999999999999999999999864
No 219
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-38 Score=344.33 Aligned_cols=257 Identities=21% Similarity=0.277 Sum_probs=193.8
Q ss_pred hccCccceeeccccCceEEEEEc-CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCC----
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVR---- 579 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~---- 579 (786)
.++|+..+.||+|+||+||+|.. .+++.||||++.... ......+.+.+|+++++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~ 101 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF--QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDD 101 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT--SSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTT
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccc--cCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCcccc
Confidence 35799999999999999999986 478999999996533 23345678899999999999999999999997653
Q ss_pred --eeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccc
Q 047901 580 --HSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFG 657 (786)
Q Consensus 580 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg 657 (786)
..|+||||+ +++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg 173 (367)
T 1cm8_A 102 FTDFYLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFG 173 (367)
T ss_dssp CCCCEEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred CceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeee
Confidence 459999999 7899999975 3588999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhh-cCcCcccchHHHHHHHHHHHhCCCCCCccccccCCC----
Q 047901 658 TAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYT-MKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSS---- 732 (786)
Q Consensus 658 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~-~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~---- 732 (786)
+|+..... .....+|+.|+|| |...+ ..++.++||||+||++|||++|+.||..........
T Consensus 174 ~a~~~~~~---~~~~~~t~~y~aP----------E~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~ 240 (367)
T 1cm8_A 174 LARQADSE---MTGYVVTRWYRAP----------EVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMK 240 (367)
T ss_dssp TCEECCSS---CCSSCSCGGGCCT----------HHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred cccccccc---cCcCcCCCCcCCH----------HHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 99876532 3345789999999 66655 679999999999999999999999987543210000
Q ss_pred --------------cchhhhhhhhccCCCCCC-ChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 733 --------------SSINIEFNAMLDHRLPHP-SLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 733 --------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
......+..........+ ..........+.+++.+||..||++|||++|+++
T Consensus 241 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 241 VTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 000000000000000000 0001112345889999999999999999999986
No 220
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=7e-39 Score=341.39 Aligned_cols=255 Identities=22% Similarity=0.267 Sum_probs=197.8
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCC----CchhhHHHHHHHHHHHhhcCCCcccceeeEEecCC
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPN----DQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVR 579 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~----~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~ 579 (786)
.++|.+.+.||+|+||.||+|+.. +++.||||++...... ........+.+|+++++.++||||+++++++....
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 457999999999999999999865 6789999998753211 11223346889999999999999999999987655
Q ss_pred eeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCc---EEEecc
Q 047901 580 HSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYE---ARVSDF 656 (786)
Q Consensus 580 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~---~kl~Df 656 (786)
.++||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++. +||+||
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Df 161 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGN---KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDF 161 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECCC
T ss_pred -eEEEEecCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEccC
Confidence 89999999999999999753 5789999999999999999999999 9999999999999987654 999999
Q ss_pred ccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhh---hcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCc
Q 047901 657 GTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAY---TMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSS 733 (786)
Q Consensus 657 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~---~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~ 733 (786)
|+++..... .......||+.|+|| |... ...++.++|||||||++|||++|+.||......
T Consensus 162 g~~~~~~~~-~~~~~~~gt~~y~aP----------E~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----- 225 (322)
T 2ycf_A 162 GHSKILGET-SLMRTLCGTPTYLAP----------EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ----- 225 (322)
T ss_dssp TTCEECCCC-HHHHHHHSCCTTCCH----------HHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS-----
T ss_pred ccceecccc-cccccccCCcCccCc----------hhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH-----
Confidence 999877532 222345799999999 5543 466889999999999999999999998743211
Q ss_pred chhhhhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 734 SINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 734 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
......+...............+..+.+++.+||..||++|||++|+++
T Consensus 226 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 226 --VSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp --SCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --HHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 0111112222222222222233456899999999999999999999985
No 221
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.7e-39 Score=353.75 Aligned_cols=245 Identities=14% Similarity=0.124 Sum_probs=189.3
Q ss_pred hccCccceeeccccCceEEEEEc-CCCCEEEEEEcCCCCCCCchhhHHHHHHHHH---HHhhcCCCccccee-------e
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIK---ALTKIRHRNIVKFY-------G 573 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~---~l~~l~hpniv~l~-------~ 573 (786)
.++|+..+.||+|+||+||+|+. .+++.||||++..... ......+.+.+|++ +++.++||||++++ +
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~ 150 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTER-PPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 150 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC--CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccc-cchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence 45788999999999999999996 4689999999975322 22345678999994 55556899999998 6
Q ss_pred EEecCC-----------------eeeEEEeccCCCCHHHHhhcCCC----CCCCCHHHHHHHHHHHHHHHHHHhhCCCCC
Q 047901 574 FCSHVR-----------------HSFVVYEYINRGSLATVLSNNFA----SEDFDWRKRMNVITGVADALSYMHHDCFPP 632 (786)
Q Consensus 574 ~~~~~~-----------------~~~lv~e~~~~g~L~~~l~~~~~----~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ 632 (786)
++...+ ..|+||||+ +|+|.+++..... ...+++..+..++.|++.||+|||+. +
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ 226 (377)
T 3byv_A 151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---G 226 (377)
T ss_dssp EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---C
Confidence 665543 278999999 5799999975411 12344688889999999999999999 9
Q ss_pred eEEcCCCCCceeeCCCCcEEEeccccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhc-----------CcCc
Q 047901 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTM-----------KITE 701 (786)
Q Consensus 633 ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~-----------~~~~ 701 (786)
|+||||||+|||++.++.+||+|||+|+.... ......| +.|+|| |+..+. .++.
T Consensus 227 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~g-~~y~aP----------E~~~~~~~~~~~~~~~~~~~~ 292 (377)
T 3byv_A 227 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA---RVVSSVS-RGFEPP----------ELEARRATISYHRDRRTLMTF 292 (377)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTC---EEECCCC-TTCCCH----------HHHHHHTSTHHHHCCEEECCH
T ss_pred eecCCCCHHHEEEcCCCCEEEEechhheecCC---cccCCCC-cCccCh----------hhhcccccccccccccccCCh
Confidence 99999999999999999999999999986432 2344567 999999 777766 7999
Q ss_pred ccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHH
Q 047901 702 KCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQT 781 (786)
Q Consensus 702 ~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~e 781 (786)
++|||||||++|||++|+.||....... ....+... .. . .+..+.+++.+||..||++|||+.|
T Consensus 293 ~~DvwSlG~il~elltg~~Pf~~~~~~~--------~~~~~~~~-~~---~----~~~~~~~li~~~L~~dp~~Rpt~~e 356 (377)
T 3byv_A 293 SFDAWALGLVIYWIWCADLPITKDAALG--------GSEWIFRS-CK---N----IPQPVRALLEGFLRYPKEDRLLPLQ 356 (377)
T ss_dssp HHHHHHHHHHHHHHHHSSCCC------C--------CSGGGGSS-CC---C----CCHHHHHHHHHHTCSSGGGCCCHHH
T ss_pred hhhHHHHHHHHHHHHHCCCCCccccccc--------chhhhhhh-cc---C----CCHHHHHHHHHHcCCCchhCCCHHH
Confidence 9999999999999999999987533211 11111111 11 1 1234889999999999999999999
Q ss_pred HHH
Q 047901 782 VCQ 784 (786)
Q Consensus 782 v~~ 784 (786)
+++
T Consensus 357 ~l~ 359 (377)
T 3byv_A 357 AME 359 (377)
T ss_dssp HHT
T ss_pred Hhh
Confidence 985
No 222
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=345.86 Aligned_cols=245 Identities=16% Similarity=0.144 Sum_probs=196.9
Q ss_pred hccCccceeeccccCceEEEEE------cCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcC---CCcccceeeEE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAK------LPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIR---HRNIVKFYGFC 575 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~---hpniv~l~~~~ 575 (786)
.++|.+.+.||+|+||+||+|. ..+++.||||++.. ....++..|+++++.++ |+||+++++++
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~-------~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~ 136 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKP-------ANPWEFYIGTQLMERLKPSMQHMFMKFYSAH 136 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESS-------CCHHHHHHHHHHHHHSCGGGGGGBCCEEEEE
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCC-------CChhHHHHHHHHHHHhhhhhhhhhhhhheee
Confidence 4679999999999999999994 44688999999864 23456778888888886 99999999999
Q ss_pred ecCCeeeEEEeccCCCCHHHHhhcCC--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCC------
Q 047901 576 SHVRHSFVVYEYINRGSLATVLSNNF--ASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDL------ 647 (786)
Q Consensus 576 ~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~------ 647 (786)
...+..++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+. +|+||||||+|||++.
T Consensus 137 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~ 213 (365)
T 3e7e_A 137 LFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQD 213 (365)
T ss_dssp ECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC-
T ss_pred ecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCcc
Confidence 99999999999999999999997431 245799999999999999999999999 9999999999999998
Q ss_pred -----CCcEEEeccccceecCC--CCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCC
Q 047901 648 -----EYEARVSDFGTAKLLKP--NSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKH 720 (786)
Q Consensus 648 -----~~~~kl~Dfg~a~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~ 720 (786)
++.+||+|||+|+.+.. ........+||+.|+|| |+..+..++.++|||||||++|||+||+.
T Consensus 214 ~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~DiwslG~il~elltg~~ 283 (365)
T 3e7e_A 214 DEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCV----------EMLSNKPWNYQIDYFGVAATVYCMLFGTY 283 (365)
T ss_dssp -----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCH----------HHHTTCCBSTHHHHHHHHHHHHHHHHSSC
T ss_pred ccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCCh----------HHhcCCCCCccccHHHHHHHHHHHHhCCC
Confidence 89999999999986542 22234456899999999 88888889999999999999999999999
Q ss_pred CCCccccccCCCcchhhhhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCC-CCHHHHHHh
Q 047901 721 PGDFLSLFSSSSSSINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSR-PTMQTVCQL 785 (786)
Q Consensus 721 Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~R-Pt~~ev~~~ 785 (786)
||...... ............ . ...+.+++..|++.+|.+| |+++++.+.
T Consensus 284 pf~~~~~~-----------~~~~~~~~~~~~--~---~~~~~~~~~~~l~~~p~~r~~~~~~l~~~ 333 (365)
T 3e7e_A 284 MKVKNEGG-----------ECKPEGLFRRLP--H---LDMWNEFFHVMLNIPDCHHLPSLDLLRQK 333 (365)
T ss_dssp CCEEEETT-----------EEEECSCCTTCS--S---HHHHHHHHHHHHCCCCTTCCCCHHHHHHH
T ss_pred ccccCCCC-----------ceeechhccccC--c---HHHHHHHHHHHcCCCCCCcchHHHHHHHH
Confidence 97532210 000111111111 1 2247788999999999999 566666553
No 223
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=2.1e-38 Score=332.49 Aligned_cols=248 Identities=21% Similarity=0.326 Sum_probs=197.6
Q ss_pred cCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEec----CCee
Q 047901 507 DFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSH----VRHS 581 (786)
Q Consensus 507 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~----~~~~ 581 (786)
.|...+.||+|+||+||+|... ++..||+|++.... ......+.+.+|+.+++.++||||+++++++.. ....
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 104 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRK--LTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI 104 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGG--SCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchh--hCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceE
Confidence 4778889999999999999864 67889999986422 223456789999999999999999999998864 4568
Q ss_pred eEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEEcCCCCCceeeC-CCCcEEEecccc
Q 047901 582 FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPP--IVHRDISSNNVLLD-LEYEARVSDFGT 658 (786)
Q Consensus 582 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~--ivHrdlk~~Nill~-~~~~~kl~Dfg~ 658 (786)
++||||+++|+|.+++... ..+++..+..++.|++.||.|||+. + |+||||||+||+++ .++.+||+|||+
T Consensus 105 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~ 178 (290)
T 1t4h_A 105 VLVTELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGL 178 (290)
T ss_dssp EEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred EEEEEecCCCCHHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence 9999999999999999764 5689999999999999999999998 7 99999999999998 789999999999
Q ss_pred ceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhh
Q 047901 659 AKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIE 738 (786)
Q Consensus 659 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~ 738 (786)
+...... ......||+.|+|| |... ..++.++||||+|+++|+|++|+.||..... ....
T Consensus 179 ~~~~~~~--~~~~~~~t~~y~aP----------E~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-------~~~~ 238 (290)
T 1t4h_A 179 ATLKRAS--FAKAVIGTPEFMAP----------EMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQN-------AAQI 238 (290)
T ss_dssp GGGCCTT--SBEESCSSCCCCCG----------GGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-------HHHH
T ss_pred ccccccc--ccccccCCcCcCCH----------HHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCc-------HHHH
Confidence 9755432 33456799999999 5444 4589999999999999999999999864221 1111
Q ss_pred hhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 739 FNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
...+..... +.......+..+.+++..||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 239 YRRVTSGVK--PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HHHHTTTCC--CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHhccCC--ccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 222222111 11111122245899999999999999999999986
No 224
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=7.6e-39 Score=333.60 Aligned_cols=246 Identities=27% Similarity=0.402 Sum_probs=193.5
Q ss_pred hccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecC-CeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHV-RHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~-~~~~l 583 (786)
.++|+..+.||+|+||+||+|+.. ++.||||++... ...+.+.+|++++++++||||+++++++... +..++
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~l 92 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND------ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 92 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC------C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEE
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecch------hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEE
Confidence 467999999999999999999875 789999998642 2456789999999999999999999987544 57899
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecC
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK 663 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 663 (786)
||||+++|+|.+++... ....+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 93 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 168 (278)
T 1byg_A 93 VTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 168 (278)
T ss_dssp EECCCTTEEHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-----
T ss_pred EEecCCCCCHHHHHHhc-ccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccc
Confidence 99999999999999754 122378999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCccccccCCCcchhhhhhhh
Q 047901 664 PNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFLSLFSSSSSSINIEFNAM 742 (786)
Q Consensus 664 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~ 742 (786)
.. .....+++.|+|| |...+..+++++||||||+++|||+| |+.||..... ......+
T Consensus 169 ~~---~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~--------~~~~~~~ 227 (278)
T 1byg_A 169 ST---QDTGKLPVKWTAP----------EALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--------KDVVPRV 227 (278)
T ss_dssp ----------CCTTTSCH----------HHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG--------GGHHHHH
T ss_pred cc---ccCCCccccccCH----------HHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHH
Confidence 32 2234678899999 78888889999999999999999998 9999874321 1111112
Q ss_pred ccC-CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 743 LDH-RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 743 ~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
... +...+.. .+..+.+++..||+.||++|||+.|+++.|
T Consensus 228 ~~~~~~~~~~~----~~~~l~~li~~~l~~~p~~Rps~~~l~~~L 268 (278)
T 1byg_A 228 EKGYKMDAPDG----CPPAVYEVMKNCWHLDAAMRPSFLQLREQL 268 (278)
T ss_dssp TTTCCCCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred hcCCCCCCccc----CCHHHHHHHHHHhcCChhhCCCHHHHHHHH
Confidence 111 1222222 234588999999999999999999998864
No 225
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.6e-38 Score=352.07 Aligned_cols=200 Identities=25% Similarity=0.383 Sum_probs=168.6
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecC-----
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHV----- 578 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~----- 578 (786)
.++|++.+.||+|+||+||+|+.. +++.||||++.... ......+.+.+|+++++.++||||+++++++...
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 102 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMF--EDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKF 102 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTT--TSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchh--cChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcC
Confidence 457999999999999999999865 67889999997532 3345567899999999999999999999998765
Q ss_pred CeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEecccc
Q 047901 579 RHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGT 658 (786)
Q Consensus 579 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~ 658 (786)
...|+||||++ |+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 103 ~~~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGl 175 (432)
T 3n9x_A 103 DELYIVLEIAD-SDLKKLFKTP---IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGL 175 (432)
T ss_dssp CCEEEEEECCS-EEHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred CeEEEEEecCC-cCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCC
Confidence 57899999997 5999999753 5689999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCC----------------------cceeeccCccccCCCCCCCCchHHHHh-hhcCcCcccchHHHHHHHHHH
Q 047901 659 AKLLKPNSS----------------------NWTELVGTFGYVAPAHGNIGLHLAELA-YTMKITEKCDVYSFGVLALEV 715 (786)
Q Consensus 659 a~~~~~~~~----------------------~~~~~~gt~~y~aPE~~~~~~~~~e~~-~~~~~~~~sDvwslGvil~el 715 (786)
|+....... .....+||++|+|| |++ ....++.++||||+||++|||
T Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP----------E~~~~~~~~~~~~DiwSlG~il~el 245 (432)
T 3n9x_A 176 ARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAP----------ELILLQENYTKSIDIWSTGCIFAEL 245 (432)
T ss_dssp CEEC-------------------------------CCCCCTTCCH----------HHHTTCSCCCTHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccchhccccCCCCCccccCH----------HHHhcCCCCCcccccchHHHHHHHH
Confidence 997754321 12456899999999 654 556799999999999999999
Q ss_pred HhCCCCCC
Q 047901 716 IKGKHPGD 723 (786)
Q Consensus 716 ltg~~Pf~ 723 (786)
++|..||.
T Consensus 246 l~g~~p~~ 253 (432)
T 3n9x_A 246 LNMLQSHI 253 (432)
T ss_dssp HTTCTTTC
T ss_pred Hhcccccc
Confidence 98766654
No 226
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.2e-38 Score=335.97 Aligned_cols=262 Identities=21% Similarity=0.287 Sum_probs=200.0
Q ss_pred ccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeEE
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVV 584 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 584 (786)
++|+..+.||+|+||+||+|+.. +++.||||++..... .....+.+.+|++++++++||||+++++++...+..++|
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE--TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 80 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCcc--chhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEE
Confidence 57899999999999999999865 789999999865321 122346788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecCC
Q 047901 585 YEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKP 664 (786)
Q Consensus 585 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 664 (786)
|||++ |+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+.....
T Consensus 81 ~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 155 (299)
T 2r3i_A 81 FEFLH-QDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 155 (299)
T ss_dssp EECCS-EEHHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred EEccc-CCHHHHHHhh-hccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccC
Confidence 99998 5999999765 335689999999999999999999999 999999999999999999999999999987754
Q ss_pred CCCcceeeccCccccCCCCCCCCchHHHHhhhcC-cCcccchHHHHHHHHHHHhCCCCCCccccccCCC----------c
Q 047901 665 NSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMK-ITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSS----------S 733 (786)
Q Consensus 665 ~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~-~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~----------~ 733 (786)
.........+|+.|+|| |...+.. ++.++|||||||++|||++|+.||.......... .
T Consensus 156 ~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 225 (299)
T 2r3i_A 156 PVRTYTHEVVTLWYRAP----------EILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225 (299)
T ss_dssp CSBCTTSCBCCCTTCCH----------HHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred CccccCcccccccccCc----------HHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCch
Confidence 44444456789999999 6665544 7899999999999999999999987533210000 0
Q ss_pred chhhhhhhhccCCCCCCC---h----hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 734 SINIEFNAMLDHRLPHPS---L----DVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 734 ~~~~~~~~~~~~~~~~~~---~----~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
........+.+.....+. . .....+..+.+++.+||+.||++|||+.|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 226 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp TTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000000000000000000 0 00112345889999999999999999999986
No 227
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=8.2e-39 Score=343.13 Aligned_cols=260 Identities=25% Similarity=0.342 Sum_probs=191.6
Q ss_pred hccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHH--hhcCCCcccceeeEEe-----c
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKAL--TKIRHRNIVKFYGFCS-----H 577 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l--~~l~hpniv~l~~~~~-----~ 577 (786)
.++|++.+.||+|+||+||+|+. +++.||||++.. .....+..|.+++ ..++||||+++++++. .
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~-------~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 83 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSF-------ANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADG 83 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEG-------GGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTS
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeec-------cchhhHHHHHHHHHHHhccCcchhhheecccccccCC
Confidence 45799999999999999999987 588999999864 2334455555554 4579999999998553 2
Q ss_pred CCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC------CCCeEEcCCCCCceeeCCCCcE
Q 047901 578 VRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDC------FPPIVHRDISSNNVLLDLEYEA 651 (786)
Q Consensus 578 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~------~~~ivHrdlk~~Nill~~~~~~ 651 (786)
....++||||+++|+|.+++... ..++..+..++.|++.||+|||+.. .++|+||||||+|||++.++.+
T Consensus 84 ~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 159 (336)
T 3g2f_A 84 RMEYLLVMEYYPNGSLXKYLSLH----TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTC 159 (336)
T ss_dssp CEEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCE
T ss_pred CceEEEEEecCCCCcHHHHHhhc----ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcE
Confidence 33568999999999999999754 3588999999999999999999863 2389999999999999999999
Q ss_pred EEeccccceecCCCCC--------cceeeccCccccCCCCCCCCchHHHHhhh-------cCcCcccchHHHHHHHHHHH
Q 047901 652 RVSDFGTAKLLKPNSS--------NWTELVGTFGYVAPAHGNIGLHLAELAYT-------MKITEKCDVYSFGVLALEVI 716 (786)
Q Consensus 652 kl~Dfg~a~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~e~~~~-------~~~~~~sDvwslGvil~ell 716 (786)
||+|||+|+....... ......||+.|+|| |...+ ..+++++|||||||++|||+
T Consensus 160 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~~~~~~~~DiwslG~il~ell 229 (336)
T 3g2f_A 160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAP----------EVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229 (336)
T ss_dssp EECCCTTCEECSSSSCC---------CCTTSCGGGCCH----------HHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeeccceeecccccccCccccccccccCCCccceeCc----------hhhcCCcccccccccccccchHHHHHHHHHHH
Confidence 9999999987754321 12234799999999 55544 45678999999999999999
Q ss_pred hCCCCCCccccccCCCcc---------hhhhhhhhccC---CCCCCCh--hHHHHHHHHHHHHHhccCCCCCCCCCHHHH
Q 047901 717 KGKHPGDFLSLFSSSSSS---------INIEFNAMLDH---RLPHPSL--DVQEKLISIMEVALLCLDGCPNSRPTMQTV 782 (786)
Q Consensus 717 tg~~Pf~~~~~~~~~~~~---------~~~~~~~~~~~---~~~~~~~--~~~~~~~~l~~li~~cl~~~p~~RPt~~ev 782 (786)
+|..||............ ........+.. +...+.. .....+..+.+++.+||+.||++|||++|+
T Consensus 230 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~ 309 (336)
T 3g2f_A 230 MRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXA 309 (336)
T ss_dssp TTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred hcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHH
Confidence 997775432211111000 01111111111 1111111 112345569999999999999999999999
Q ss_pred HHhC
Q 047901 783 CQLL 786 (786)
Q Consensus 783 ~~~L 786 (786)
++.|
T Consensus 310 l~~L 313 (336)
T 3g2f_A 310 EERM 313 (336)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8864
No 228
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=3.2e-39 Score=347.29 Aligned_cols=259 Identities=19% Similarity=0.215 Sum_probs=194.2
Q ss_pred hccCccceeeccccCceEEEEEcC----CCCEEEEEEcCCCCCCCch-------hhHHHHHHHHHHHhhcCCCcccceee
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP----SGDKIAVKKFNSPFPNDQM-------SDQKEFLNEIKALTKIRHRNIVKFYG 573 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~-------~~~~~~~~e~~~l~~l~hpniv~l~~ 573 (786)
.++|++.+.||+|+||+||+|+.. ++..||||++......... .....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 357999999999999999999865 5678999998753211000 01224667888999999999999999
Q ss_pred EEec----CCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCC
Q 047901 574 FCSH----VRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEY 649 (786)
Q Consensus 574 ~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~ 649 (786)
++.. ....|+||||+ +++|.+++... +.+++..+..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~ 188 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQN---GTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKN 188 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGG---GBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCC
Confidence 9877 67889999999 99999999765 3789999999999999999999999 999999999999998887
Q ss_pred --cEEEeccccceecCCCCC-------cceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCC
Q 047901 650 --EARVSDFGTAKLLKPNSS-------NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKH 720 (786)
Q Consensus 650 --~~kl~Dfg~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~ 720 (786)
.+||+|||+|+....... ......||+.|+|| |...+..++.++|||||||++|||++|+.
T Consensus 189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~Di~slG~il~ell~g~~ 258 (345)
T 2v62_A 189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSL----------DAHKGVALSRRSDVEILGYCMLRWLCGKL 258 (345)
T ss_dssp TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCH----------HHHHTCCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred CCcEEEEeCCCceecccccccccchhccccccCCCccccCH----------HHhcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence 999999999987643211 12345799999999 88888889999999999999999999999
Q ss_pred CCCccccccCCCcchhhhhhhhccCCCCCCChhHH-----HHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 721 PGDFLSLFSSSSSSINIEFNAMLDHRLPHPSLDVQ-----EKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 721 Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
||..... ...............+ +..... ..+..+.+++..||..||++|||+++|++.|
T Consensus 259 pf~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L 323 (345)
T 2v62_A 259 PWEQNLK----DPVAVQTAKTNLLDEL--PQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKIL 323 (345)
T ss_dssp TTGGGTT----CHHHHHHHHHHHHHTT--THHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHH
T ss_pred Ccccccc----ccHHHHHHHHhhcccc--cHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHH
Confidence 9853211 0000001111111111 110000 1234689999999999999999999999864
No 229
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=340.23 Aligned_cols=259 Identities=25% Similarity=0.417 Sum_probs=203.9
Q ss_pred hccCccceeeccccCceEEEEEc-----CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCC
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKL-----PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVR 579 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~ 579 (786)
.++|++.+.||+|+||.||+|++ .+++.||||++.. ......+.+.+|+++++.++||||+++++++...+
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 115 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH----STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 115 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESS----CCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC--
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEecc----CCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecC
Confidence 45689999999999999999983 3688999999975 23345678999999999999999999999986544
Q ss_pred --eeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccc
Q 047901 580 --HSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFG 657 (786)
Q Consensus 580 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg 657 (786)
..++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 116 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg 190 (326)
T 2w1i_A 116 RRNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFG 190 (326)
T ss_dssp --CCEEEECCCTTCBHHHHHHHS--TTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCT
T ss_pred CCceEEEEECCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCc
Confidence 789999999999999999865 34689999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCc---ceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCcccc-c----c
Q 047901 658 TAKLLKPNSSN---WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSL-F----S 729 (786)
Q Consensus 658 ~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~-~----~ 729 (786)
+++........ .....++..|+|| |...+..++.++||||||+++|||+||..||..... + .
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~ 260 (326)
T 2w1i_A 191 LTKVLPQDKEYYKVKEPGESPIFWYAP----------ESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 260 (326)
T ss_dssp TCEECCSSCSEEECSSCCSCCGGGCCH----------HHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHC
T ss_pred chhhccccccccccccCCCCceeEECc----------hhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhc
Confidence 99987654322 1234577889999 777888899999999999999999999999753210 0 0
Q ss_pred CCC--cchhhhhhhhccC--CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 730 SSS--SSINIEFNAMLDH--RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 730 ~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
... ..........+.. +.+.+.. .+..+.+++..||+.||++|||+.|+++.|
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~li~~cl~~dP~~Rps~~el~~~L 317 (326)
T 2w1i_A 261 NDKQGQMIVFHLIELLKNNGRLPRPDG----CPDEIYMIMTECWNNNVNQRPSFRDLALRV 317 (326)
T ss_dssp TTCCTHHHHHHHHHHHHTTCCCCCCTT----CCHHHHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred cccchhhhHHHHHHHhhcCCCCCCCCc----ccHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 000 0000111122221 2222222 234589999999999999999999999864
No 230
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=8.6e-39 Score=346.35 Aligned_cols=257 Identities=22% Similarity=0.313 Sum_probs=202.7
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|+..+.||+|+||+||+|+.. +++.||+|++... ......+.+.+|+.+++.++||||+++++++..++..++
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 108 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE---IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI 108 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECC---CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccc---cCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEE
Confidence 357999999999999999999865 7889999999753 233456789999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecC
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK 663 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 663 (786)
||||+++|+|.+++... +.+++..+..++.|++.|++|||+.. +|+||||||+||+++.++.+||+|||++....
T Consensus 109 v~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 183 (360)
T 3eqc_A 109 CMEHMDGGSLDQVLKKA---GRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 183 (360)
T ss_dssp EECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHH
T ss_pred EEECCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccc
Confidence 99999999999999764 46899999999999999999999831 89999999999999999999999999997653
Q ss_pred CCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccC-------------
Q 047901 664 PNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSS------------- 730 (786)
Q Consensus 664 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~------------- 730 (786)
.. ......||+.|+|| |...+..++.++|||||||++|||++|+.||........
T Consensus 184 ~~--~~~~~~gt~~y~aP----------E~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 251 (360)
T 3eqc_A 184 DS--MANSFVGTRSYMSP----------ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAA 251 (360)
T ss_dssp HH--C----CCCCTTCCH----------HHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------
T ss_pred cc--cccCCCCCCCeECH----------HHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCC
Confidence 22 12345799999999 788888899999999999999999999999875321000
Q ss_pred ---------------------CCcchhhhhhhhccCCCC-CCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 731 ---------------------SSSSINIEFNAMLDHRLP-HPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 731 ---------------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.................. .+. ...+..+.+++..||+.||++|||++|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 252 ETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPS---GVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp ----------------------CCCHHHHHHHHHHSCCCCCCT---TTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCc---ccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 000000001111111111 111 112335889999999999999999999986
No 231
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=3e-38 Score=349.14 Aligned_cols=198 Identities=19% Similarity=0.286 Sum_probs=172.5
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhc------CCCcccceeeEEec
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI------RHRNIVKFYGFCSH 577 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l------~hpniv~l~~~~~~ 577 (786)
..+|++.+.||+|+||+||+|+.. +++.||||++.. .......+.+|+.+++.+ .||||+++++++..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~-----~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~ 170 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRN-----EKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF 170 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECS-----CHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECC-----ccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc
Confidence 346999999999999999999755 688999999964 233456777888888877 57799999999999
Q ss_pred CCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCc--EEEec
Q 047901 578 VRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYE--ARVSD 655 (786)
Q Consensus 578 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~--~kl~D 655 (786)
.+..++||||++ ++|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|
T Consensus 171 ~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~D 245 (429)
T 3kvw_A 171 RNHICMTFELLS-MNLYELIKKN-KFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVID 245 (429)
T ss_dssp TTEEEEEECCCC-CBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECC
T ss_pred CCeEEEEEeccC-CCHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEee
Confidence 999999999996 5999999865 334589999999999999999999999 9999999999999999887 99999
Q ss_pred cccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCcc
Q 047901 656 FGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFL 725 (786)
Q Consensus 656 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~ 725 (786)
||+|+..... .....||+.|+|| |++.+..++.++|||||||++|||++|++||...
T Consensus 246 FG~a~~~~~~---~~~~~gt~~y~aP----------E~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 246 FGSSCYEHQR---VYTYIQSRFYRAP----------EVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp CTTCEETTCC---CCSSCSCGGGCCH----------HHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccceecCCc---ccccCCCCCccCh----------HHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 9999876433 2345899999999 8888888999999999999999999999998754
No 232
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=9.1e-39 Score=341.24 Aligned_cols=252 Identities=23% Similarity=0.360 Sum_probs=193.8
Q ss_pred HhccCccceeeccccCceEEEEEc-CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhc-CCCcccceeeEEec----
Q 047901 504 RTKDFDAKYCIGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGFCSH---- 577 (786)
Q Consensus 504 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~---- 577 (786)
..++|++.+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|+.+++++ +||||+++++++..
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 96 (326)
T 2x7f_A 22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 96 (326)
T ss_dssp CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-----STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-----ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCc
Confidence 356899999999999999999986 478899999986521 2345788999999999 79999999999876
Q ss_pred --CCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEec
Q 047901 578 --VRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSD 655 (786)
Q Consensus 578 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~D 655 (786)
.+..++||||+++|+|.+++... ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~D 172 (326)
T 2x7f_A 97 GMDDQLWLVMEFCGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVD 172 (326)
T ss_dssp CCCCEEEEEEECCTTEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECC
T ss_pred cccceEEEEEEcCCCCcHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEee
Confidence 46789999999999999999864 235689999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhh-----hcCcCcccchHHHHHHHHHHHhCCCCCCccccccC
Q 047901 656 FGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAY-----TMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSS 730 (786)
Q Consensus 656 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~-----~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~ 730 (786)
||++..............||+.|+|| |... ...++.++|||||||++|||++|+.||.....
T Consensus 173 fg~~~~~~~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--- 239 (326)
T 2x7f_A 173 FGVSAQLDRTVGRRNTFIGTPYWMAP----------EVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP--- 239 (326)
T ss_dssp CTTTC-------------CCGGGCCH----------HHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCH---
T ss_pred CcCceecCcCccccccccCCccccCh----------hhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcH---
Confidence 99998765443334456799999999 5554 46688999999999999999999999864321
Q ss_pred CCcchhhhhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 731 SSSSINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
......+.....+.. .....+..+.+++.+||..||++|||++++++
T Consensus 240 -----~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 240 -----MRALFLIPRNPAPRL--KSKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp -----HHHHHHHHHSCCCCC--SCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred -----HHHHHHhhcCccccC--CccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 111111111111100 00111235889999999999999999999986
No 233
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=6.9e-38 Score=340.21 Aligned_cols=258 Identities=21% Similarity=0.299 Sum_probs=192.4
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCC----
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVR---- 579 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~---- 579 (786)
.++|+..+.||+|+||+||+|+.. +++.||||++.... ......+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 101 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 101 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTT--SSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTT
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEecccc--CChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccc
Confidence 357999999999999999999854 68899999997532 23345677889999999999999999999997654
Q ss_pred --eeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccc
Q 047901 580 --HSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFG 657 (786)
Q Consensus 580 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg 657 (786)
..++||||+++ +|.+++. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 172 (371)
T 2xrw_A 102 FQDVYIVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 172 (371)
T ss_dssp CCEEEEEEECCSE-EHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred ccceEEEEEcCCC-CHHHHHh-----hccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEee
Confidence 78999999975 7888885 3488999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCC------
Q 047901 658 TAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSS------ 731 (786)
Q Consensus 658 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~------ 731 (786)
+|+..... .......||+.|+|| |+..+..++.++||||+||++|||++|+.||.........
T Consensus 173 ~a~~~~~~-~~~~~~~gt~~y~aP----------E~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~ 241 (371)
T 2xrw_A 173 LARTAGTS-FMMTPYVVTRYYRAP----------EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 241 (371)
T ss_dssp C-----------------CTTCCH----------HHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-
T ss_pred cccccccc-cccCCceecCCccCH----------HHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 99876532 223446899999999 7888888999999999999999999999998754321000
Q ss_pred -Ccc-------hhhhhhhhccCC----------------CCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 732 -SSS-------INIEFNAMLDHR----------------LPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 732 -~~~-------~~~~~~~~~~~~----------------~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
... ............ .+............+.+++.+||..||++|||++|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 242 LGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred hCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 000 000000000000 01111112233567899999999999999999999986
No 234
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.4e-38 Score=336.08 Aligned_cols=257 Identities=25% Similarity=0.403 Sum_probs=185.0
Q ss_pred HhccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeee
Q 047901 504 RTKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSF 582 (786)
Q Consensus 504 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~ 582 (786)
..++|++.+.||+|+||+||+|+.. +++.||||++.... .....+.+.+|++++++++||||+++++++...+..+
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 89 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEK---CQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELW 89 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-------------------CCCCCCCTTBCCEEEEEESSSCEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhh---cchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcE
Confidence 3568999999999999999999864 68899999986532 1234567889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcC-----CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccc
Q 047901 583 VVYEYINRGSLATVLSNN-----FASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFG 657 (786)
Q Consensus 583 lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg 657 (786)
+||||+++|+|.+++... .....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||
T Consensus 90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 166 (303)
T 2vwi_A 90 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFG 166 (303)
T ss_dssp EEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCH
T ss_pred EEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEecc
Confidence 999999999999998641 1245689999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCC-----cceeeccCccccCCCCCCCCchHHHHhhh-cCcCcccchHHHHHHHHHHHhCCCCCCccccccCC
Q 047901 658 TAKLLKPNSS-----NWTELVGTFGYVAPAHGNIGLHLAELAYT-MKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSS 731 (786)
Q Consensus 658 ~a~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~e~~~~-~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~ 731 (786)
.+........ ......||+.|+|| |.... ..++.++||||||+++|||++|+.||......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--- 233 (303)
T 2vwi_A 167 VSAFLATGGDITRNKVRKTFVGTPCWMAP----------EVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM--- 233 (303)
T ss_dssp HHHHCC---------------CCCTTCCH----------HHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGG---
T ss_pred chheeccCCCccchhhhcccCCCccccCH----------HHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchh---
Confidence 9976643211 12345799999999 66654 56899999999999999999999998753321
Q ss_pred CcchhhhhhhhccCCCCC-CC-----hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 732 SSSINIEFNAMLDHRLPH-PS-----LDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
............. +. ......+..+.+++.+||+.||++|||+.|+++
T Consensus 234 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 234 -----KVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp -----GHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred -----hHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 0111111111100 00 000112235889999999999999999999986
No 235
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=2.3e-38 Score=331.02 Aligned_cols=243 Identities=22% Similarity=0.378 Sum_probs=200.2
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEec------
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSH------ 577 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~------ 577 (786)
..+|+..+.||+|+||.||+|+.. +++.||||++.... +.+.+|+++++.++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN--------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPE 81 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS--------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc--------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcc
Confidence 457999999999999999999875 78999999997521 246689999999999999999998854
Q ss_pred ----------CCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCC
Q 047901 578 ----------VRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDL 647 (786)
Q Consensus 578 ----------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~ 647 (786)
....++||||+++|+|.+++... ....+++..+..++.|++.||.|||+. +|+||||||+||+++.
T Consensus 82 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~ 157 (284)
T 2a19_B 82 TSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR-RGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVD 157 (284)
T ss_dssp -------CCEEEEEEEEECCCCSCBHHHHHHHG-GGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEE
T ss_pred cccccccccCcceEEEEEeccCCCCHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcC
Confidence 44579999999999999999754 235689999999999999999999999 9999999999999999
Q ss_pred CCcEEEeccccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCcccc
Q 047901 648 EYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSL 727 (786)
Q Consensus 648 ~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~ 727 (786)
++.+||+|||++....... ......||+.|+|| |...+..++.++||||||+++|||++|..||...
T Consensus 158 ~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-- 224 (284)
T 2a19_B 158 TKQVKIGDFGLVTSLKNDG-KRTRSKGTLRYMSP----------EQISSQDYGKEVDLYALGLILAELLHVCDTAFET-- 224 (284)
T ss_dssp TTEEEECCCTTCEESSCCS-CCCCCCSCCTTSCH----------HHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH--
T ss_pred CCCEEECcchhheeccccc-cccccCCcccccCh----------hhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH--
Confidence 9999999999998876542 23345799999999 7788888999999999999999999999985421
Q ss_pred ccCCCcchhhhhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 728 FSSSSSSINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
...........+. ... +..+.+++..||+.||++|||+.|+++.|
T Consensus 225 --------~~~~~~~~~~~~~--~~~----~~~~~~li~~~l~~dp~~Rps~~e~l~~l 269 (284)
T 2a19_B 225 --------SKFFTDLRDGIIS--DIF----DKKEKTLLQKLLSKKPEDRPNTSEILRTL 269 (284)
T ss_dssp --------HHHHHHHHTTCCC--TTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred --------HHHHHHhhccccc--ccC----CHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 1111222222222 111 23478999999999999999999998763
No 236
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.4e-37 Score=345.96 Aligned_cols=333 Identities=18% Similarity=0.186 Sum_probs=146.8
Q ss_pred eEEEEcCCCCCcccCCcCccCCCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCC
Q 047901 3 VNSINLTSTGLKGTLQEFSFSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLS 82 (786)
Q Consensus 3 ~~~l~l~~~~l~~~l~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 82 (786)
++.|++++|++.+ ++ .|..+++|++|+|++|+++++ | +..+++|++|+|++|+|+++ + |+.+++|++|+|+
T Consensus 44 L~~L~Ls~n~l~~-~~--~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~ 114 (457)
T 3bz5_A 44 LTSLDCHNSSITD-MT--GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCD 114 (457)
T ss_dssp CCEEECCSSCCCC-CT--TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECC
T ss_pred CCEEEccCCCccc-Ch--hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECC
Confidence 4445555554442 22 244445555555555554433 1 44445555555555555432 1 4445555555555
Q ss_pred CccCcccCCCCCCCCCCcEEEccCCcCcccCchhhcccCCcceeccccccccccCChhhhccCccceeecccccccCCCC
Q 047901 83 LNQFSGTFPPICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIP 162 (786)
Q Consensus 83 ~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~ 162 (786)
+|++++++ +..+++|++|+|++|+++++ .++++++|++|++++|+..+.+ .+..+++|+.|++++|++++++
T Consensus 115 ~N~l~~l~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l~- 186 (457)
T 3bz5_A 115 TNKLTKLD--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITELD- 186 (457)
T ss_dssp SSCCSCCC--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCCC-
T ss_pred CCcCCeec--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccceec-
Confidence 55544431 44445555555555555443 1444445555555555322222 2444444555555555544432
Q ss_pred CcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCc--
Q 047901 163 NLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSS-- 240 (786)
Q Consensus 163 ~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-- 240 (786)
+..+++|+.|++++|+++++ .|..+++|++|+|++|+++++ | +..+++|+.|++++|++++..+..+..+.
T Consensus 187 -l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~i-p--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L 259 (457)
T 3bz5_A 187 -VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEI-D--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTL 259 (457)
T ss_dssp -CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEE
T ss_pred -cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCccccc-C--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEE
Confidence 44444555555555554443 244445555555555555442 2 44444555555555555443322222222
Q ss_pred -----cccEEEeecccccccCCCCcccccccccccccccccCCCCcc--------ccccCCcCceeccccccccccchhh
Q 047901 241 -----QLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPR--------ALGLLTELEYFDLSSNRLNNSILEA 307 (786)
Q Consensus 241 -----~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~--------~~~~l~~L~~L~L~~N~l~~~~~~~ 307 (786)
+|+.|++++|.+.+.+| +..+++|+.|++++|...+..|. .++++++|+.|++++|+++++ .
T Consensus 260 ~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l---~ 334 (457)
T 3bz5_A 260 HCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTEL---D 334 (457)
T ss_dssp ECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCC---C
T ss_pred eccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCccccc---c
Confidence 22223333333222222 23344455555555443322221 133334445555555555443 1
Q ss_pred hhcccCCcEEEecccccCCCcchHHhhhcCcCeeeccCCccCCCCCcccccccccceeccccccccccCC
Q 047901 308 LGFMFKLFYLNFSHNQFSQEIPEDLALLAHLSELDLSHNLFKGSIPSRICNLESLEKLNLSHNNISGQIP 377 (786)
Q Consensus 308 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 377 (786)
+..+++|+.|++++|++++ ++.|..|++++|.+++. ..+..|+.+++++|+++|.+|
T Consensus 335 l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip 391 (457)
T 3bz5_A 335 VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVS 391 (457)
T ss_dssp CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECC
T ss_pred cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcC
Confidence 4444445555555555443 13344444555544432 233444444555555544444
No 237
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.3e-38 Score=365.64 Aligned_cols=244 Identities=25% Similarity=0.352 Sum_probs=195.0
Q ss_pred eeeccccCceEEEEEcC---CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeEEEecc
Q 047901 512 YCIGKGEHRSVYRAKLP---SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVVYEYI 588 (786)
Q Consensus 512 ~~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 588 (786)
+.||+|+||+||+|.+. .++.||||+++... ......+++.+|++++++++|||||++++++.. +..++||||+
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~ 451 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA--NDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMA 451 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGG--GCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECC
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEcc
Confidence 47999999999999642 45789999997521 223446789999999999999999999999975 5578999999
Q ss_pred CCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecCCCCCc
Q 047901 589 NRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSN 668 (786)
Q Consensus 589 ~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 668 (786)
++|+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+........
T Consensus 452 ~~g~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 525 (635)
T 4fl3_A 452 ELGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525 (635)
T ss_dssp TTEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred CCCCHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc
Confidence 999999999754 5689999999999999999999999 9999999999999999999999999999877544321
Q ss_pred ---ceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCccccccCCCcchhhhhhhhcc
Q 047901 669 ---WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFLSLFSSSSSSINIEFNAMLD 744 (786)
Q Consensus 669 ---~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~ 744 (786)
.....+|+.|+|| |++....++.++|||||||++|||++ |+.||..... ......+..
T Consensus 526 ~~~~~~~~~t~~y~AP----------E~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~--------~~~~~~i~~ 587 (635)
T 4fl3_A 526 YKAQTHGKWPVKWYAP----------ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--------SEVTAMLEK 587 (635)
T ss_dssp ---------CGGGSCH----------HHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--------HHHHHHHHT
T ss_pred cccccCCCCceeeeCh----------hhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHc
Confidence 2234567899999 88888899999999999999999998 9999875321 111222222
Q ss_pred C-CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 745 H-RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 745 ~-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
. +...+.. .+..+.++|..||+.||++|||+++|++.|
T Consensus 588 ~~~~~~p~~----~~~~l~~li~~cl~~dP~~RPs~~~l~~~L 626 (635)
T 4fl3_A 588 GERMGCPAG----CPREMYDLMNLCWTYDVENRPGFAAVELRL 626 (635)
T ss_dssp TCCCCCCTT----CCHHHHHHHHHHTCSSTTTSCCHHHHHHHH
T ss_pred CCCCCCCCC----CCHHHHHHHHHHcCCCHhHCcCHHHHHHHH
Confidence 2 2223332 234589999999999999999999998864
No 238
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=4.9e-39 Score=349.49 Aligned_cols=257 Identities=10% Similarity=0.023 Sum_probs=182.1
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhc--CCCccccee-------eE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI--RHRNIVKFY-------GF 574 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l--~hpniv~l~-------~~ 574 (786)
..+|+..+.||+|+||+||+|+.. +++.||||++..... ......+.+.+|+.+++.+ +||||++++ ++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~ 139 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAE-NSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDA 139 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCST-THHHHHHHHHHHHHHHHHHHC----------CBCCCCEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEeccc-ccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehh
Confidence 345899999999999999999865 788999999986422 2334556778885554444 699988754 44
Q ss_pred EecC-----------------CeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHH------HHHHHHHHHHHHHHhhCCCC
Q 047901 575 CSHV-----------------RHSFVVYEYINRGSLATVLSNNFASEDFDWRKR------MNVITGVADALSYMHHDCFP 631 (786)
Q Consensus 575 ~~~~-----------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~------~~i~~~ia~~l~~LH~~~~~ 631 (786)
+... ...|+||||++ |+|.+++.... ..+++..+ ..++.|++.||+|||++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~--- 213 (371)
T 3q60_A 140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD--FVYVFRGDEGILALHILTAQLIRLAANLQSK--- 213 (371)
T ss_dssp EEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH--HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred eecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc--cccchhhhhhhhhHHHHHHHHHHHHHHHHHC---
Confidence 4332 33799999999 89999997641 23344445 67889999999999999
Q ss_pred CeEEcCCCCCceeeCCCCcEEEeccccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhh--cCcCcccchHHHH
Q 047901 632 PIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYT--MKITEKCDVYSFG 709 (786)
Q Consensus 632 ~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~--~~~~~~sDvwslG 709 (786)
+|+||||||+|||++.++.+||+|||+|+..... .....+|+.|+|| |...+ ..++.++||||||
T Consensus 214 ~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~---~~~~~~t~~y~aP----------E~~~~~~~~~~~~~DiwSlG 280 (371)
T 3q60_A 214 GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR---GPASSVPVTYAPR----------EFLNASTATFTHALNAWQLG 280 (371)
T ss_dssp TEEETTCSGGGEEECTTSCEEECCGGGEEETTCE---EEGGGSCGGGCCH----------HHHTCSEEECCHHHHHHHHH
T ss_pred CCccCcCCHHHEEECCCCCEEEEecceeeecCCC---ccCccCCcCCcCh----------hhccCCCCCcCccccHHHHH
Confidence 9999999999999999999999999999876432 2245678999999 77766 6789999999999
Q ss_pred HHHHHHHhCCCCCCccccccCCCcchhhhhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 710 VLALEVIKGKHPGDFLSLFSSSSSSINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 710 vil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
|++|||++|+.||............ ..............+. ....+..+.+++.+||+.||++|||+.|+++
T Consensus 281 ~il~elltg~~Pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 281 LSIYRVWCLFLPFGLVTPGIKGSWK-RPSLRVPGTDSLAFGS--CTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp HHHHHHHHSSCSTTBCCTTCTTCCC-BCCTTSCCCCSCCCTT--SSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred HHHHHHHhCCCCCCCcCcccccchh-hhhhhhccccccchhh--ccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 9999999999998754321100000 0000111111111111 1122345889999999999999999999975
No 239
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=338.07 Aligned_cols=259 Identities=19% Similarity=0.299 Sum_probs=197.9
Q ss_pred hccCccceeeccccCceEEEEEc-CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEe----cCC
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCS----HVR 579 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~----~~~ 579 (786)
.++|++.+.||+|+||.||+|+. .+++.||||++.. ......+.+.+|+++++.++||||+++++++. ...
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILC----HEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKH 103 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEE----SSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEec----CCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCc
Confidence 46799999999999999999986 5789999999864 23455678999999999999999999999986 345
Q ss_pred eeeEEEeccCCCCHHHHhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEecccc
Q 047901 580 HSFVVYEYINRGSLATVLSNNF-ASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGT 658 (786)
Q Consensus 580 ~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~ 658 (786)
..++||||+++|+|.+++.... ....+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||.
T Consensus 104 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~ 180 (317)
T 2buj_A 104 EAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGS 180 (317)
T ss_dssp EEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSS
T ss_pred eeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCc
Confidence 7899999999999999997531 245789999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCc---------ceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCcccccc
Q 047901 659 AKLLKPNSSN---------WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFS 729 (786)
Q Consensus 659 a~~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~ 729 (786)
+......... .....||+.|+|||.+... ....+++++||||||+++|||++|+.||.......
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~ 253 (317)
T 2buj_A 181 MNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQ-------SHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG 253 (317)
T ss_dssp CEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCC-------SEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTT
T ss_pred chhcccccccccccccccccccccCCcccCCHhHhccC-------CCcCCCchhhHHHHHHHHHHHHhCCCChhhhhccc
Confidence 8865421110 1234579999999533211 12236889999999999999999999986321100
Q ss_pred CCCcchhhhhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 730 SSSSSINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
......... ....+.+.. .+..+.+++.+||+.||++|||+.|+++.|
T Consensus 254 ---~~~~~~~~~--~~~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~~L 301 (317)
T 2buj_A 254 ---DSVALAVQN--QLSIPQSPR----HSSALWQLLNSMMTVDPHQRPHIPLLLSQL 301 (317)
T ss_dssp ---SCHHHHHHC--C--CCCCTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred ---chhhHHhhc--cCCCCcccc----CCHHHHHHHHHHhhcChhhCCCHHHHHHHh
Confidence 000111111 111121111 233588999999999999999999999864
No 240
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=3e-38 Score=331.43 Aligned_cols=253 Identities=26% Similarity=0.391 Sum_probs=194.6
Q ss_pred hccCccceeeccccCceEEEEEcC--CCC--EEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCe
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP--SGD--KIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRH 580 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~ 580 (786)
.++|++.+.||+|+||+||+|++. +++ .||||++..... ......+.+.+|+++++.++||||+++++++....
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~- 94 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVL-SQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP- 94 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC---------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCcc-CCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-
Confidence 357999999999999999999853 333 689999875322 22345678999999999999999999999998755
Q ss_pred eeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccce
Q 047901 581 SFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAK 660 (786)
Q Consensus 581 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~ 660 (786)
.++||||+++|+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 95 ~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~ 169 (291)
T 1u46_A 95 MKMVTELAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMR 169 (291)
T ss_dssp CEEEEECCTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred ceeeEecccCCCHHHHHHhc--cCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccc
Confidence 88999999999999999764 35689999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCCc---ceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCccccccCCCcchh
Q 047901 661 LLKPNSSN---WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFLSLFSSSSSSIN 736 (786)
Q Consensus 661 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~ 736 (786)
........ .....+|..|+|| |...+..++.++||||||+++|||++ |+.||.... ..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--------~~ 231 (291)
T 1u46_A 170 ALPQNDDHYVMQEHRKVPFAWCAP----------ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN--------GS 231 (291)
T ss_dssp ECCC-CCEEEC-----CCGGGCCH----------HHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC--------HH
T ss_pred cccccccchhhhccCCCCceeeCc----------hhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCC--------HH
Confidence 87654322 2234678899999 77888889999999999999999999 999987432 12
Q ss_pred hhhhhhccCC--CCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 737 IEFNAMLDHR--LPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 737 ~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
.....+.... ...+.. .+..+.+++..||+.||++|||+.++++.|
T Consensus 232 ~~~~~~~~~~~~~~~~~~----~~~~l~~li~~~l~~~p~~Rps~~~l~~~l 279 (291)
T 1u46_A 232 QILHKIDKEGERLPRPED----CPQDIYNVMVQCWAHKPEDRPTFVALRDFL 279 (291)
T ss_dssp HHHHHHHTSCCCCCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHHHHccCCCCCCCcC----cCHHHHHHHHHHccCCcccCcCHHHHHHHH
Confidence 2222222222 222222 234589999999999999999999998864
No 241
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.2e-38 Score=341.56 Aligned_cols=256 Identities=20% Similarity=0.334 Sum_probs=203.5
Q ss_pred hccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCc-------------hhhHHHHHHHHHHHhhcCCCcccce
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQ-------------MSDQKEFLNEIKALTKIRHRNIVKF 571 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-------------~~~~~~~~~e~~~l~~l~hpniv~l 571 (786)
.++|++.+.||+|+||+||+|+. +++.||||++........ ....+.+.+|+++++.++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 35799999999999999999998 899999999864211110 0112789999999999999999999
Q ss_pred eeEEecCCeeeEEEeccCCCCHHHH------hhcCCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEEcCCCCCcee
Q 047901 572 YGFCSHVRHSFVVYEYINRGSLATV------LSNNFASEDFDWRKRMNVITGVADALSYMHH-DCFPPIVHRDISSNNVL 644 (786)
Q Consensus 572 ~~~~~~~~~~~lv~e~~~~g~L~~~------l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~-~~~~~ivHrdlk~~Nil 644 (786)
++++.+.+..++||||+++|+|.++ +... ....+++..+..++.|++.||.|||+ . +|+||||||+||+
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil 184 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN-YTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNIL 184 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSS-SCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhc-cccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEE
Confidence 9999999999999999999999999 5432 24679999999999999999999999 8 9999999999999
Q ss_pred eCCCCcEEEeccccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhc-CcCc-ccchHHHHHHHHHHHhCCCCC
Q 047901 645 LDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTM-KITE-KCDVYSFGVLALEVIKGKHPG 722 (786)
Q Consensus 645 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~-~~~~-~sDvwslGvil~elltg~~Pf 722 (786)
++.++.+||+|||.+...... ......||..|+|| |...+. .++. ++||||||+++|||++|+.||
T Consensus 185 ~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aP----------E~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf 252 (348)
T 2pml_X 185 MDKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPP----------EFFSNESSYNGAKVDIWSLGICLYVMFYNVVPF 252 (348)
T ss_dssp ECTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCG----------GGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSS
T ss_pred EcCCCcEEEeccccccccccc--cccCCCCCcCccCc----------hhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCC
Confidence 999999999999999876543 33445799999999 555544 5655 999999999999999999998
Q ss_pred CccccccCCCcchhhhhhhhccCCCCCCCh---------------hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 723 DFLSLFSSSSSSINIEFNAMLDHRLPHPSL---------------DVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
..... .......+.......+.. .....+..+.+++.+||+.||++|||++|+++
T Consensus 253 ~~~~~-------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 253 SLKIS-------LVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp CCSSC-------SHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCCCc-------HHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 74321 012222222222222210 00223346899999999999999999999986
No 242
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=340.46 Aligned_cols=253 Identities=21% Similarity=0.297 Sum_probs=184.6
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcC-CCcccceeeEEe------
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIR-HRNIVKFYGFCS------ 576 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-hpniv~l~~~~~------ 576 (786)
..+|++.+.||+|+||+||+|+.. +++.||||++.. ......+.+.+|+.+++++. ||||+++++++.
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~----~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~ 102 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLS----NEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEES 102 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEE----SSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecC----CchHHHHHHHHHHHHHHHhccCCChhhcccccccccccc
Confidence 357999999999999999999864 789999999854 23445678899999999996 999999999983
Q ss_pred --cCCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEEcCCCCCceeeCCCCcEE
Q 047901 577 --HVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPP--IVHRDISSNNVLLDLEYEAR 652 (786)
Q Consensus 577 --~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~--ivHrdlk~~Nill~~~~~~k 652 (786)
.....++||||++ |+|.+++......+.+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+|
T Consensus 103 ~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~k 178 (337)
T 3ll6_A 103 DTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIK 178 (337)
T ss_dssp TTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEE
T ss_pred ccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEE
Confidence 3445789999996 69999987643456799999999999999999999998 7 99999999999999999999
Q ss_pred EeccccceecCCCCCc------------ceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCC
Q 047901 653 VSDFGTAKLLKPNSSN------------WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKH 720 (786)
Q Consensus 653 l~Dfg~a~~~~~~~~~------------~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~ 720 (786)
|+|||+++........ .....||+.|+|||++. ...+..+++++|||||||++|||++|+.
T Consensus 179 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~-------~~~~~~~~~~~Dv~slG~il~el~~g~~ 251 (337)
T 3ll6_A 179 LCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIID-------LYSNFPIGEKQDIWALGCILYLLCFRQH 251 (337)
T ss_dssp BCCCTTCBCCSSCC--------------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSC
T ss_pred EecCccceeccccCcccccccccccchhhccccCCCCcCChhhhh-------ccccCCCChHHhHHHHHHHHHHHHhCCC
Confidence 9999999876543221 11346899999995431 1145678899999999999999999999
Q ss_pred CCCccccccCCCcchhhhhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 721 PGDFLSLFSSSSSSINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 721 Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
||...... .........+.. ......+.+++..||+.||++|||+.|+++.|
T Consensus 252 p~~~~~~~------------~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l 303 (337)
T 3ll6_A 252 PFEDGAKL------------RIVNGKYSIPPH--DTQYTVFHSLIRAMLQVNPEERLSIAEVVHQL 303 (337)
T ss_dssp CC------------------------CCCCTT--CCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred CCcchhHH------------HhhcCcccCCcc--cccchHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 98743221 111111111100 01112378999999999999999999999864
No 243
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=3.6e-38 Score=332.77 Aligned_cols=250 Identities=25% Similarity=0.387 Sum_probs=193.7
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEec------
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSH------ 577 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~------ 577 (786)
.++|+..+.||+|+||+||+|+.. +++.||||++.. .....+.+.+|+++++.++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 79 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-----TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVK 79 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE-----EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec-----cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhh
Confidence 567999999999999999999864 789999999853 23456788999999999999999999998754
Q ss_pred -------CCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCc
Q 047901 578 -------VRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYE 650 (786)
Q Consensus 578 -------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~ 650 (786)
.+..++||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 80 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~ 154 (303)
T 1zy4_A 80 PMTAVKKKSTLFIQMEYCENGTLYDLIHSE--NLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRN 154 (303)
T ss_dssp ------CEEEEEEEEECCCSCBHHHHHHHS--CGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSC
T ss_pred hhcccccCCceEEEEecCCCCCHHHhhhcc--ccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCC
Confidence 45679999999999999999864 35678899999999999999999999 9999999999999999999
Q ss_pred EEEeccccceecCCCC--------------CcceeeccCccccCCCCCCCCchHHHHhhh-cCcCcccchHHHHHHHHHH
Q 047901 651 ARVSDFGTAKLLKPNS--------------SNWTELVGTFGYVAPAHGNIGLHLAELAYT-MKITEKCDVYSFGVLALEV 715 (786)
Q Consensus 651 ~kl~Dfg~a~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~-~~~~~~sDvwslGvil~el 715 (786)
+||+|||.++...... .......||+.|+|| |...+ ..++.++|||||||++|||
T Consensus 155 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~~Di~slG~il~~l 224 (303)
T 1zy4_A 155 VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVAT----------EVLDGTGHYNEKIDMYSLGIIFFEM 224 (303)
T ss_dssp EEECCCCCCSCTTC-------------------------CTTSCH----------HHHTSCSCCCTHHHHHHHHHHHHHH
T ss_pred EEEeeCcchhhcccccchhccccccccccccccccCCCcccccCc----------ccccCCCCCcchhhHHHHHHHHHHH
Confidence 9999999998764321 122345789999999 66654 3688999999999999999
Q ss_pred HhCCCCCCccccccCCCcchhhhhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 716 IKGKHPGDFLSLFSSSSSSINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 716 ltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
++ ||.... ........+.......+.......+..+.+++..||+.||++|||++|+++
T Consensus 225 ~~---p~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 225 IY---PFSTGM-------ERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HS---CCSSHH-------HHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred Hh---ccCCch-------hHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 98 543211 111122222222222232222333445889999999999999999999986
No 244
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.6e-39 Score=349.08 Aligned_cols=254 Identities=17% Similarity=0.226 Sum_probs=197.7
Q ss_pred ccCccceeeccccCceEEEEEcCC---------CCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccc------
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKLPS---------GDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVK------ 570 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~------ 570 (786)
++|++.+.||+|+||+||+|+... ++.||||++... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~---------~~~~~E~~~l~~l~h~niv~~~~~~~ 112 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD---------GRLFNEQNFFQRAAKPLQVNKWKKLY 112 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT---------STHHHHHHHHHHHCCHHHHHHHHHHT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc---------chHHHHHHHHHHhcccchhhhhhhhc
Confidence 579999999999999999998763 789999998642 35779999999999999998
Q ss_pred ---------eeeEEec-CCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCC
Q 047901 571 ---------FYGFCSH-VRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISS 640 (786)
Q Consensus 571 ---------l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~ 640 (786)
+++++.. ++..++||||+ +++|.+++... ....+++..+..++.|++.||+|||+. +|+||||||
T Consensus 113 ~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp 187 (352)
T 2jii_A 113 STPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS-PKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTA 187 (352)
T ss_dssp TCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCG
T ss_pred cCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC-CcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCH
Confidence 5677765 77889999999 99999999864 235799999999999999999999999 999999999
Q ss_pred CceeeCCCC--cEEEeccccceecCCCCC-------cceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHH
Q 047901 641 NNVLLDLEY--EARVSDFGTAKLLKPNSS-------NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVL 711 (786)
Q Consensus 641 ~Nill~~~~--~~kl~Dfg~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvi 711 (786)
+||+++.++ .+||+|||+++....... ......||+.|+|| |...+..++.++|||||||+
T Consensus 188 ~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~Di~slG~i 257 (352)
T 2jii_A 188 ENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISM----------DLHKGCGPSRRSDLQSLGYC 257 (352)
T ss_dssp GGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCH----------HHHTTCCCCHHHHHHHHHHH
T ss_pred HHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCH----------HHHccCCCCchhhHHHHHHH
Confidence 999999998 999999999987653221 12334799999999 78888889999999999999
Q ss_pred HHHHHhCCCCCCccccccCCCcchhhhhhhhccCCCCCCC--hhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 712 ALEVIKGKHPGDFLSLFSSSSSSINIEFNAMLDHRLPHPS--LDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 712 l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
+|||++|+.||...... ..................+. ......+..+.+++..||+.||++|||++++++.|
T Consensus 258 l~el~~g~~pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L 331 (352)
T 2jii_A 258 MLKWLYGFLPWTNCLPN---TEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNL 331 (352)
T ss_dssp HHHHHHSCCTTGGGTTC---HHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHH
T ss_pred HHHHHhCCCCcccCCcC---HHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHH
Confidence 99999999998753210 00011111111111111000 00011124589999999999999999999998864
No 245
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=5.2e-38 Score=328.86 Aligned_cols=253 Identities=24% Similarity=0.350 Sum_probs=204.9
Q ss_pred HhccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeee
Q 047901 504 RTKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSF 582 (786)
Q Consensus 504 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~ 582 (786)
..++|++.+.||+|+||+||+|+.. +++.||||++..... .....+.+.+|++++++++||||+++++++...+..+
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 97 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA--KNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGB--SSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEeccccc--chHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEE
Confidence 3568999999999999999999865 788999999865321 1234568899999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCC---CcEEEeccccc
Q 047901 583 VVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLE---YEARVSDFGTA 659 (786)
Q Consensus 583 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~---~~~kl~Dfg~a 659 (786)
+||||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.+ +.+||+|||++
T Consensus 98 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~ 171 (287)
T 2wei_A 98 IVGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (287)
T ss_dssp EEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred EEEEccCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcc
Confidence 999999999999998754 4689999999999999999999999 99999999999999754 47999999999
Q ss_pred eecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhh
Q 047901 660 KLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEF 739 (786)
Q Consensus 660 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~ 739 (786)
....... ......||+.|+|| |...+ .++.++||||||+++|+|++|+.||..... ....
T Consensus 172 ~~~~~~~-~~~~~~~~~~y~aP----------E~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--------~~~~ 231 (287)
T 2wei_A 172 TCFQQNT-KMKDRIGTAYYIAP----------EVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE--------YDIL 231 (287)
T ss_dssp GTBCCCS-SCSCHHHHHTTCCH----------HHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHH
T ss_pred eeecCCC-ccccccCcccccCh----------HHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCH--------HHHH
Confidence 8765432 22345689999999 65544 488999999999999999999999874321 1222
Q ss_pred hhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 740 NAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
..+.......+.......+..+.+++.+||+.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 232 KRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp HHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 233333333222222233456899999999999999999999986
No 246
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=4.8e-38 Score=340.81 Aligned_cols=271 Identities=20% Similarity=0.242 Sum_probs=199.2
Q ss_pred cHHHHHHHhccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCC-------chhhHHHHHHHHHHHhhcCCCccc
Q 047901 497 MYEEIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPND-------QMSDQKEFLNEIKALTKIRHRNIV 569 (786)
Q Consensus 497 ~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-------~~~~~~~~~~e~~~l~~l~hpniv 569 (786)
...++....++|+..+.||+|+||+||+|...+++.||||++....... .....+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 4566777789999999999999999999998889999999986533221 112247899999999999999999
Q ss_pred ceeeEEec-----CCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCcee
Q 047901 570 KFYGFCSH-----VRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVL 644 (786)
Q Consensus 570 ~l~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nil 644 (786)
++++++.. ....|+||||++ |+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+||+
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl 166 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ--RIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNIL 166 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEE
Confidence 99999843 346799999998 5898888753 35789999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEeccccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhh-cCcCcccchHHHHHHHHHHHhCCCCCC
Q 047901 645 LDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYT-MKITEKCDVYSFGVLALEVIKGKHPGD 723 (786)
Q Consensus 645 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~-~~~~~~sDvwslGvil~elltg~~Pf~ 723 (786)
++.++.+||+|||+++...... ......||+.|+|| |...+ ..++.++||||+||++|||++|+.||.
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~t~~y~aP----------E~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~ 235 (362)
T 3pg1_A 167 LADNNDITICDFNLAREDTADA-NKTHYVTHRWYRAP----------ELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFR 235 (362)
T ss_dssp ECTTCCEEECCTTC----------------CGGGCCH----------HHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred EcCCCCEEEEecCccccccccc-ccceecccceecCc----------HHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCC
Confidence 9999999999999998654332 23445789999999 66655 678999999999999999999999987
Q ss_pred ccccccCCCc--------c-------hhhhhhhhccCCCC-CCChhH----HHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 047901 724 FLSLFSSSSS--------S-------INIEFNAMLDHRLP-HPSLDV----QEKLISIMEVALLCLDGCPNSRPTMQTVC 783 (786)
Q Consensus 724 ~~~~~~~~~~--------~-------~~~~~~~~~~~~~~-~~~~~~----~~~~~~l~~li~~cl~~~p~~RPt~~ev~ 783 (786)
.......... . .............. .+.... ......+.+++..||+.||++|||+.|++
T Consensus 236 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 315 (362)
T 3pg1_A 236 GSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQAL 315 (362)
T ss_dssp CSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHH
Confidence 5331100000 0 00000001111111 111111 11234588999999999999999999998
Q ss_pred H
Q 047901 784 Q 784 (786)
Q Consensus 784 ~ 784 (786)
+
T Consensus 316 ~ 316 (362)
T 3pg1_A 316 R 316 (362)
T ss_dssp T
T ss_pred c
Confidence 6
No 247
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=3.9e-38 Score=344.61 Aligned_cols=258 Identities=21% Similarity=0.270 Sum_probs=191.4
Q ss_pred hccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCC-----
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVR----- 579 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~----- 579 (786)
..+|+..+.||+|+||+||+|+...+..||+|++...... ..+|+++++.++||||+++++++...+
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~--------~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~ 110 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF--------KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDE 110 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS--------CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSC
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch--------HHHHHHHHHhCCCCCcceEEEEEEecCCCCCc
Confidence 3579999999999999999999877777999998652211 126999999999999999999985433
Q ss_pred -eeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeC-CCCcEEEeccc
Q 047901 580 -HSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLD-LEYEARVSDFG 657 (786)
Q Consensus 580 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~-~~~~~kl~Dfg 657 (786)
..++||||++++.+............+++..+..++.|++.||+|||+. +|+||||||+|||++ .++.+||+|||
T Consensus 111 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG 187 (394)
T 4e7w_A 111 VFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFG 187 (394)
T ss_dssp EEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred eEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCC
Confidence 3789999998754433332222346789999999999999999999999 999999999999999 78999999999
Q ss_pred cceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhh-cCcCcccchHHHHHHHHHHHhCCCCCCccccccCCC----
Q 047901 658 TAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYT-MKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSS---- 732 (786)
Q Consensus 658 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~-~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~---- 732 (786)
+|+....... .....||+.|+|| |.+.+ ..++.++||||+||++|||++|+.||..........
T Consensus 188 ~a~~~~~~~~-~~~~~~t~~y~aP----------E~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~ 256 (394)
T 4e7w_A 188 SAKILIAGEP-NVSYICSRYYRAP----------ELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIK 256 (394)
T ss_dssp TCEECCTTCC-CCSSCSCGGGCCH----------HHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred CcccccCCCC-CcccccCcCccCH----------HHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 9988754332 2345789999999 66654 458999999999999999999999997543210000
Q ss_pred ---cchhhhhhh----hccCCCCC-CChhH-----HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 733 ---SSINIEFNA----MLDHRLPH-PSLDV-----QEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 733 ---~~~~~~~~~----~~~~~~~~-~~~~~-----~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
....+.... ......+. ..... ...+..+.+++.+||..||++|||+.|+++
T Consensus 257 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 257 VLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp HHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 000000000 00111110 00000 112346899999999999999999999975
No 248
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=7.8e-38 Score=339.12 Aligned_cols=259 Identities=20% Similarity=0.303 Sum_probs=198.8
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecC-----
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHV----- 578 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~----- 578 (786)
.++|+..+.||+|+||+||+|+.. +++.||||++.. .......+.+.+|++++++++||||+++++++...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 102 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP---FEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQM 102 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---TTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecc---ccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCcccc
Confidence 457999999999999999999854 678899999964 22344557889999999999999999999998654
Q ss_pred CeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEecccc
Q 047901 579 RHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGT 658 (786)
Q Consensus 579 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~ 658 (786)
...++||||+++ +|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~iv~e~~~~-~L~~~l~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 174 (364)
T 3qyz_A 103 KDVYIVQDLMET-DLYKLLKT----QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGL 174 (364)
T ss_dssp CCEEEEEECCSE-EHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEcccCc-CHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcc
Confidence 468999999985 99999875 3589999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCC---cceeeccCccccCCCCCCCCchHHHHhh-hcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCc-
Q 047901 659 AKLLKPNSS---NWTELVGTFGYVAPAHGNIGLHLAELAY-TMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSS- 733 (786)
Q Consensus 659 a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~e~~~-~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~- 733 (786)
++....... ......||+.|+|| |... ...++.++||||+||++|||++|+.||...........
T Consensus 175 a~~~~~~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i 244 (364)
T 3qyz_A 175 ARVADPDHDHTGFLTEYVATRWYRAP----------EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244 (364)
T ss_dssp CEECCGGGCBCCTTCCCCSCGGGCCH----------HHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHH
T ss_pred eEecCCCCCccccccccccccCCCCC----------HHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHH
Confidence 987754322 12445899999999 6544 44589999999999999999999999875432110000
Q ss_pred ------chhhhh--------hhhcc---CCCCCC-ChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 734 ------SINIEF--------NAMLD---HRLPHP-SLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 734 ------~~~~~~--------~~~~~---~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
...... ..... .....+ ..........+.+++.+||+.||++|||+.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 245 LGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000000 00000 000000 0000112345889999999999999999999986
No 249
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=3e-38 Score=341.72 Aligned_cols=257 Identities=19% Similarity=0.301 Sum_probs=182.2
Q ss_pred hccCccceeeccccCceEEEEEc-CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecC-----
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHV----- 578 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~----- 578 (786)
.++|+..+.||+|+||+||+|.. .+++.||||++.... ......+.+.+|+.+++.++||||+++++++...
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 105 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 105 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccc--cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCcccc
Confidence 46799999999999999999985 478899999997532 2334567888999999999999999999998654
Q ss_pred -CeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccc
Q 047901 579 -RHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFG 657 (786)
Q Consensus 579 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg 657 (786)
...++||||+ +++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 106 ~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG 177 (367)
T 2fst_X 106 FNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 177 (367)
T ss_dssp CCCCEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC--
T ss_pred CCeEEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecc
Confidence 5679999999 6799998864 4689999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhh-cCcCcccchHHHHHHHHHHHhCCCCCCccccccCCC----
Q 047901 658 TAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYT-MKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSS---- 732 (786)
Q Consensus 658 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~-~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~---- 732 (786)
+++..... .....||+.|+|| |...+ ..++.++||||+||++|||++|+.||..........
T Consensus 178 ~a~~~~~~---~~~~~~t~~y~aP----------E~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~ 244 (367)
T 2fst_X 178 LARHTADE---MTGYVATRWYRAP----------EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 244 (367)
T ss_dssp ----------------CCCTTCCH----------HHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred cccccccc---CCCcCcCcCccCh----------HHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 99876432 3346899999999 66655 678999999999999999999999997543210000
Q ss_pred ---cc--------hhhhhhhhccCCCCCCChhHH----HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 733 ---SS--------INIEFNAMLDHRLPHPSLDVQ----EKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 733 ---~~--------~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.. ........+..-...+..... .....+.+++.+||..||++|||+.|+++
T Consensus 245 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 245 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp HHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 00 000000111100011111111 12345889999999999999999999985
No 250
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=2.3e-37 Score=331.01 Aligned_cols=253 Identities=21% Similarity=0.256 Sum_probs=196.6
Q ss_pred hccCccceeeccccCceEEEEEc-CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcC-CCcccceeeEEec--CCe
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIR-HRNIVKFYGFCSH--VRH 580 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-hpniv~l~~~~~~--~~~ 580 (786)
.++|++.+.||+|+||+||+|+. .+++.||||++.. ...+.+.+|+++++.++ ||||+++++++.. ...
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~-------~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~ 107 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP-------VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRT 107 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS-------CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCC
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc-------cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCc
Confidence 36799999999999999999975 5789999999864 23467889999999997 9999999999987 667
Q ss_pred eeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCC-cEEEeccccc
Q 047901 581 SFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEY-EARVSDFGTA 659 (786)
Q Consensus 581 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~-~~kl~Dfg~a 659 (786)
.++||||+++++|.+++. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+|
T Consensus 108 ~~lv~e~~~~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a 178 (330)
T 3nsz_A 108 PALVFEHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLA 178 (330)
T ss_dssp EEEEEECCCCCCHHHHGG------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred eEEEEeccCchhHHHHHH------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCc
Confidence 899999999999999884 378899999999999999999999 999999999999999776 8999999999
Q ss_pred eecCCCCCcceeeccCccccCCCCCCCCchHHHHhhh-cCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcc----
Q 047901 660 KLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYT-MKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSS---- 734 (786)
Q Consensus 660 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~-~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~---- 734 (786)
+...... ......||..|+|| |...+ ..++.++||||+||++|||++|+.||............
T Consensus 179 ~~~~~~~-~~~~~~~~~~y~aP----------E~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~ 247 (330)
T 3nsz_A 179 EFYHPGQ-EYNVRVASRYFKGP----------ELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 247 (330)
T ss_dssp EECCTTC-CCCSCCSCGGGCCH----------HHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHH
T ss_pred eEcCCCC-ccccccccccccCh----------hhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHh
Confidence 8775433 23455799999999 66655 67899999999999999999999998432110000000
Q ss_pred -hhhhhhhhc-cCCCCC--------------------CChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 735 -INIEFNAML-DHRLPH--------------------PSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 735 -~~~~~~~~~-~~~~~~--------------------~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
........+ ...... +.......+..+.+++.+||+.||++|||++|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 248 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred cCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000000000 000000 00001112456899999999999999999999986
No 251
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=7.6e-38 Score=343.77 Aligned_cols=256 Identities=20% Similarity=0.273 Sum_probs=199.3
Q ss_pred hccCccceeeccccCceEEEEEc-CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcC--------CCcccceeeEE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIR--------HRNIVKFYGFC 575 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~--------hpniv~l~~~~ 575 (786)
.++|++.+.||+|+||+||+|+. .+++.||||++.. .....+.+.+|+++++.++ ||||+++++++
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~-----~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~ 110 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKS-----AEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDF 110 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS-----CHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEec-----CCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecce
Confidence 36799999999999999999985 4688999999964 2345567889999999985 78899999998
Q ss_pred e----cCCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCC--
Q 047901 576 S----HVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEY-- 649 (786)
Q Consensus 576 ~----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~-- 649 (786)
. .....++||||+ ++++.+++... ....+++..++.++.|++.||+|||+++ +|+||||||+|||++.++
T Consensus 111 ~~~~~~~~~~~lv~e~~-~~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~ 186 (397)
T 1wak_A 111 KISGVNGTHICMVFEVL-GHHLLKWIIKS-NYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQY 186 (397)
T ss_dssp EEEETTEEEEEEEECCC-CCBHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHH
T ss_pred eecCCCCceEEEEEecc-CccHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchh
Confidence 7 566889999999 56777777654 2356899999999999999999999853 899999999999999775
Q ss_pred -----------------------------------------------cEEEeccccceecCCCCCcceeeccCccccCCC
Q 047901 650 -----------------------------------------------EARVSDFGTAKLLKPNSSNWTELVGTFGYVAPA 682 (786)
Q Consensus 650 -----------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE 682 (786)
.+||+|||.|+..... .....||+.|+||
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~aP- 262 (397)
T 1wak_A 187 IRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRSL- 262 (397)
T ss_dssp HHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCCH-
T ss_pred hhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---CccCCCCCcccCC-
Confidence 7999999999877533 3345799999999
Q ss_pred CCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhhcc--CC--------------
Q 047901 683 HGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAMLD--HR-------------- 746 (786)
Q Consensus 683 ~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~--~~-------------- 746 (786)
|++.+..++.++|||||||++|||++|+.||.......... .......+.. ..
T Consensus 263 ---------E~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 331 (397)
T 1wak_A 263 ---------EVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTR--DEDHIALIIELLGKVPRKLIVAGKYSKE 331 (397)
T ss_dssp ---------HHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCH--HHHHHHHHHHHHCSCCHHHHHHCTTGGG
T ss_pred ---------hhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCc--hHHHHHHHHHhcCCCChHHhhccccccc
Confidence 88888889999999999999999999999997533211000 0000000000 00
Q ss_pred ----------CC--CC----------ChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 747 ----------LP--HP----------SLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 747 ----------~~--~~----------~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
+. .+ .....+....+.+++.+||+.||++|||++|+++
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 332 FFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp TBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred ccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 00 00 0012345567899999999999999999999986
No 252
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=9.8e-38 Score=332.20 Aligned_cols=258 Identities=21% Similarity=0.298 Sum_probs=190.3
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEe-------
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCS------- 576 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~------- 576 (786)
.++|+..+.||+|+||+||+|+.. +++.||||++.. ......+.+.+|+++++.++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 85 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVL----TDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLT 85 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEEC----CSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCC
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEec----CChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccc
Confidence 357999999999999999999876 588999999865 23455678899999999999999999999873
Q ss_pred -------cCCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeC-CC
Q 047901 577 -------HVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLD-LE 648 (786)
Q Consensus 577 -------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~-~~ 648 (786)
.....++||||++ |+|.+++.. +.+++..+..++.|++.||+|||+. +|+||||||+||+++ .+
T Consensus 86 ~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~ 157 (320)
T 2i6l_A 86 DDVGSLTELNSVYIVQEYME-TDLANVLEQ----GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTED 157 (320)
T ss_dssp C----CCSCSEEEEEEECCS-EEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTT
T ss_pred cccccccccCceeEEeeccC-CCHHHHhhc----CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCC
Confidence 3467899999998 599999963 4689999999999999999999999 999999999999997 56
Q ss_pred CcEEEeccccceecCCCC---CcceeeccCccccCCCCCCCCchHHHHhhh-cCcCcccchHHHHHHHHHHHhCCCCCCc
Q 047901 649 YEARVSDFGTAKLLKPNS---SNWTELVGTFGYVAPAHGNIGLHLAELAYT-MKITEKCDVYSFGVLALEVIKGKHPGDF 724 (786)
Q Consensus 649 ~~~kl~Dfg~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~-~~~~~~sDvwslGvil~elltg~~Pf~~ 724 (786)
+.+||+|||+++...... .......+|..|+|| |.... ..++.++|||||||++|||++|+.||..
T Consensus 158 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP----------E~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 227 (320)
T 2i6l_A 158 LVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSP----------RLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAG 227 (320)
T ss_dssp TEEEECCCTTCBCC--------CCCGGGSCCTTCCH----------HHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CeEEEccCccccccCCCcccccccccccccccccCc----------HHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCC
Confidence 799999999998765321 122345679999999 55543 6789999999999999999999999875
Q ss_pred cccccCC-------Ccchhhhhhhhcc-------CCCCCCCh----hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 725 LSLFSSS-------SSSINIEFNAMLD-------HRLPHPSL----DVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 725 ~~~~~~~-------~~~~~~~~~~~~~-------~~~~~~~~----~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
....... .........++.. .....+.. .....+..+.+++.+||+.||++|||++|+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 228 AHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp SSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 4321000 0000000000000 00000000 00112346899999999999999999999986
No 253
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=4.4e-37 Score=336.67 Aligned_cols=309 Identities=19% Similarity=0.178 Sum_probs=205.0
Q ss_pred CCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCCC-CCCCCCCcEEE
Q 047901 25 FPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFPP-ICNLSNLKYIS 103 (786)
Q Consensus 25 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~ 103 (786)
++++++|++++|.++.+.+..|.++++|++|+|++|+|+.+.+.+|..+++|++|+|++|+++++++. +..+++|++|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 46777777777777766666677777777777777777777667777777777777777777766554 66777777777
Q ss_pred ccCCcCcccCchhhcccCCcceeccccccccccCChhhhccCccceeecccccccCCCCCcCCCCCCcEEEccCcccccc
Q 047901 104 LHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGN 183 (786)
Q Consensus 104 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~ 183 (786)
|++|+++.+++..|.++++|++|++++|++++..|..+..+++|+.|++++|.++. +
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-----------------------~ 180 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH-----------------------V 180 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSB-----------------------C
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCc-----------------------c
Confidence 77777776666667777777777777777776555555555555555555555543 3
Q ss_pred cCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCCCCcccc
Q 047901 184 ISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRL 263 (786)
Q Consensus 184 ~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l 263 (786)
.+..+++|++|++++|.++++ ...++|++|++++|.+... |.. ..++|+.|++++|.+++. ..+..+
T Consensus 181 ---~~~~l~~L~~L~l~~n~l~~~-----~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l 247 (390)
T 3o6n_A 181 ---DLSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLNY 247 (390)
T ss_dssp ---CGGGCTTCSEEECCSSCCSEE-----ECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGC
T ss_pred ---ccccccccceeeccccccccc-----CCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcCC
Confidence 133345555555555555432 1223555566666655533 221 135666666666666643 456666
Q ss_pred cccccccccccccCCCCccccccCCcCceeccccccccccchhhhhcccCCcEEEecccccCCCcchHHhhhcCcCeeec
Q 047901 264 ISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQEIPEDLALLAHLSELDL 343 (786)
Q Consensus 264 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 343 (786)
++|+.|+|++|.++++.|..|..+++|+.|+|++|+++.++. .+..+++|++|+|++|+++ ..|..+..+++|+.|+|
T Consensus 248 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L 325 (390)
T 3o6n_A 248 PGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNL-YGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYL 325 (390)
T ss_dssp TTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEEEC-SSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEEC
T ss_pred CCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcccCc-ccCCCCCCCEEECCCCcce-ecCccccccCcCCEEEC
Confidence 777777777777776667777777777777777777766432 3355677777777777776 44556777788888888
Q ss_pred cCCccCCCCCcccccccccceeccccccccc
Q 047901 344 SHNLFKGSIPSRICNLESLEKLNLSHNNISG 374 (786)
Q Consensus 344 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 374 (786)
++|+++.. + +..+++|+.|++++|++.+
T Consensus 326 ~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 326 DHNSIVTL-K--LSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp CSSCCCCC-C--CCTTCCCSEEECCSSCEEH
T ss_pred CCCcccee-C--chhhccCCEEEcCCCCccc
Confidence 88888743 2 5566677777777777764
No 254
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=2.1e-37 Score=332.38 Aligned_cols=252 Identities=20% Similarity=0.291 Sum_probs=199.6
Q ss_pred hccCccceeeccccCceEEEEEc--CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCC------cccceeeEEe
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKL--PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHR------NIVKFYGFCS 576 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hp------niv~l~~~~~ 576 (786)
.++|++.+.||+|+||+||+|.. .+++.||||++.. .....+.+.+|+++++.++|+ +++++++++.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~-----~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~ 87 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKN-----VDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFE 87 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS-----SHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEec-----CCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccc
Confidence 35799999999999999999985 3678999999864 234456788999999988665 4999999999
Q ss_pred cCCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCC---------
Q 047901 577 HVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDL--------- 647 (786)
Q Consensus 577 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~--------- 647 (786)
..+..++||||+ +++|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 88 ~~~~~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~ 162 (339)
T 1z57_A 88 HHGHICIVFELL-GLSTYDFIKEN-GFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNP 162 (339)
T ss_dssp ETTEEEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC-
T ss_pred cCCcEEEEEcCC-CCCHHHHHHhc-CCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCC
Confidence 999999999999 88999999865 234689999999999999999999999 9999999999999987
Q ss_pred ----------CCcEEEeccccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh
Q 047901 648 ----------EYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK 717 (786)
Q Consensus 648 ----------~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt 717 (786)
++.+||+|||.++..... .....||+.|+|| |...+..++.++|||||||++|||++
T Consensus 163 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aP----------E~~~~~~~~~~~Di~slG~il~el~~ 229 (339)
T 1z57_A 163 KIKRDERTLINPDIKVVDFGSATYDDEH---HSTLVSTRHYRAP----------EVILALGWSQPCDVWSIGCILIEYYL 229 (339)
T ss_dssp ---CEEEEESCCCEEECCCSSCEETTSC---CCSSCSCGGGCCH----------HHHTTSCCCTHHHHHHHHHHHHHHHH
T ss_pred ccccccccccCCCceEeeCcccccCccc---cccccCCccccCh----------HHhhCCCCCcchhhHHHHHHHHHHHh
Confidence 668999999999875432 2345799999999 78888889999999999999999999
Q ss_pred CCCCCCccccccCCCcchhhhhhhhcc------------------CCCCCC-------------------ChhHHHHHHH
Q 047901 718 GKHPGDFLSLFSSSSSSINIEFNAMLD------------------HRLPHP-------------------SLDVQEKLIS 760 (786)
Q Consensus 718 g~~Pf~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~-------------------~~~~~~~~~~ 760 (786)
|+.||....... .......... .....+ ..........
T Consensus 230 g~~pf~~~~~~~-----~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (339)
T 1z57_A 230 GFTVFPTHDSKE-----HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHER 304 (339)
T ss_dssp SSCSCCCSCHHH-----HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHH
T ss_pred CCCCCCCCChHH-----HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHH
Confidence 999987532100 0000000000 000000 0001223456
Q ss_pred HHHHHHhccCCCCCCCCCHHHHHH
Q 047901 761 IMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 761 l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
+.+++.+||+.||++|||++|+++
T Consensus 305 l~~li~~~L~~dP~~Rpt~~ell~ 328 (339)
T 1z57_A 305 LFDLIQKMLEYDPAKRITLREALK 328 (339)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHhCcCcccccCHHHHhc
Confidence 899999999999999999999975
No 255
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.1e-37 Score=337.62 Aligned_cols=266 Identities=19% Similarity=0.205 Sum_probs=186.3
Q ss_pred HHHHHHhccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEec
Q 047901 499 EEIIRRTKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSH 577 (786)
Q Consensus 499 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~ 577 (786)
++.....++|++.+.||+|+||+||+|+.. +++.||||++.... .....+.++++.++.++||||+++++++..
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~l~~l~h~niv~~~~~~~~ 90 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-----RFRNRELQIMQDLAVLHHPNIVQLQSYFYT 90 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-----TCCCHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-----cccHHHHHHHHHHHhcCCCCcccHHHhhhc
Confidence 455667789999999999999999999864 68999999986522 122345678888888999999999999865
Q ss_pred CCe-------eeEEEeccCCCCHHHHhhc-CCCCCCCCHHHHHHHHHHHHHHHHHHh--hCCCCCeEEcCCCCCceeeCC
Q 047901 578 VRH-------SFVVYEYINRGSLATVLSN-NFASEDFDWRKRMNVITGVADALSYMH--HDCFPPIVHRDISSNNVLLDL 647 (786)
Q Consensus 578 ~~~-------~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~i~~~ia~~l~~LH--~~~~~~ivHrdlk~~Nill~~ 647 (786)
.+. .++||||+++ +|.+.+.. ......+++..+..++.|++.|+.||| +. +|+||||||+||+++.
T Consensus 91 ~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~ 166 (360)
T 3e3p_A 91 LGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNE 166 (360)
T ss_dssp ECSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEET
T ss_pred cccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeC
Confidence 333 7899999987 55544432 223467899999999999999999999 77 9999999999999997
Q ss_pred -CCcEEEeccccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhh-cCcCcccchHHHHHHHHHHHhCCCCCCcc
Q 047901 648 -EYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYT-MKITEKCDVYSFGVLALEVIKGKHPGDFL 725 (786)
Q Consensus 648 -~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~-~~~~~~sDvwslGvil~elltg~~Pf~~~ 725 (786)
++.+||+|||+++...... ......||+.|+|| |...+ ..++.++|||||||++|||++|+.||...
T Consensus 167 ~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aP----------E~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~ 235 (360)
T 3e3p_A 167 ADGTLKLCDFGSAKKLSPSE-PNVAYICSRYYRAP----------ELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGD 235 (360)
T ss_dssp TTTEEEECCCTTCBCCCTTS-CCCSTTSCGGGCCH----------HHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCCcEEEeeCCCceecCCCC-CcccccCCcceeCH----------HHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCC
Confidence 8999999999998775432 23345789999999 66654 44899999999999999999999998753
Q ss_pred ccccCCC-------cchhhhhhhhccCCCC-----CCChhHH--------HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 726 SLFSSSS-------SSINIEFNAMLDHRLP-----HPSLDVQ--------EKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 726 ~~~~~~~-------~~~~~~~~~~~~~~~~-----~~~~~~~--------~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
....... .........+...... .....+. ..+..+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 236 NSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp SHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 3210000 0000000000000000 0000000 12446899999999999999999999975
No 256
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.4e-37 Score=339.44 Aligned_cols=259 Identities=22% Similarity=0.245 Sum_probs=192.1
Q ss_pred HHhccCccceeeccccCceEEEEEc-CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEec----
Q 047901 503 RRTKDFDAKYCIGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSH---- 577 (786)
Q Consensus 503 ~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~---- 577 (786)
...++|+..+.||+|+||+||+|+. .+++.||||++..... ...+|+++++.++||||+++++++..
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~--------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 75 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR--------YKNRELDIMKVLDHVNIIKLVDYFYTTGDE 75 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT--------SCCHHHHHHTTCCCTTBCCEEEEEEEC---
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc--------hHHHHHHHHHHcCCCCccchhheeeecCcc
Confidence 3456899999999999999999985 5789999999865221 12379999999999999999999843
Q ss_pred ----------------------------------CCeeeEEEeccCCCCHHHHhhcC-CCCCCCCHHHHHHHHHHHHHHH
Q 047901 578 ----------------------------------VRHSFVVYEYINRGSLATVLSNN-FASEDFDWRKRMNVITGVADAL 622 (786)
Q Consensus 578 ----------------------------------~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~ia~~l 622 (786)
....++||||+++ +|.+.+... .....+++..+..++.|++.||
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL 154 (383)
T 3eb0_A 76 EPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAV 154 (383)
T ss_dssp ----------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 3347899999984 887777532 1345789999999999999999
Q ss_pred HHHhhCCCCCeEEcCCCCCceeeC-CCCcEEEeccccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhh-cCcC
Q 047901 623 SYMHHDCFPPIVHRDISSNNVLLD-LEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYT-MKIT 700 (786)
Q Consensus 623 ~~LH~~~~~~ivHrdlk~~Nill~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~-~~~~ 700 (786)
+|||+. +|+||||||+||+++ .++.+||+|||+|+...... ......||+.|+|| |...+ ..++
T Consensus 155 ~~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~t~~y~aP----------E~~~~~~~~~ 220 (383)
T 3eb0_A 155 GFIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE-PSVAYICSRFYRAP----------ELMLGATEYT 220 (383)
T ss_dssp HHHHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS-CCCCCCCCSSCCCH----------HHHTTCSSCC
T ss_pred HHHHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC-CCcCcccCCCccCH----------HHhcCCCCCC
Confidence 999999 999999999999997 68999999999999775433 23345789999999 66655 4589
Q ss_pred cccchHHHHHHHHHHHhCCCCCCccccccCCC-------cchhhhhhhhc----cCCCC-CCChhH-----HHHHHHHHH
Q 047901 701 EKCDVYSFGVLALEVIKGKHPGDFLSLFSSSS-------SSINIEFNAML----DHRLP-HPSLDV-----QEKLISIME 763 (786)
Q Consensus 701 ~~sDvwslGvil~elltg~~Pf~~~~~~~~~~-------~~~~~~~~~~~----~~~~~-~~~~~~-----~~~~~~l~~ 763 (786)
.++||||+||++|||++|+.||.......... ....+....+. ....+ .....+ ...+..+.+
T Consensus 221 ~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (383)
T 3eb0_A 221 PSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAID 300 (383)
T ss_dssp THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHH
T ss_pred cchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHH
Confidence 99999999999999999999987533210000 00000000000 00000 000000 112345889
Q ss_pred HHHhccCCCCCCCCCHHHHHH
Q 047901 764 VALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 764 li~~cl~~~p~~RPt~~ev~~ 784 (786)
++.+||..||++|||+.|+++
T Consensus 301 li~~~L~~dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 301 LLEQILRYEPDLRINPYEAMA 321 (383)
T ss_dssp HHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHHccCChhhCCCHHHHhc
Confidence 999999999999999999985
No 257
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.4e-37 Score=335.91 Aligned_cols=259 Identities=21% Similarity=0.275 Sum_probs=197.7
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecC-----
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHV----- 578 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~----- 578 (786)
.++|+..+.||+|+||+||+|+.. +++.||||++.. .........+.+|+++++.++||||+++++++...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 86 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEP---FDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENF 86 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---CSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecc---cccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCcc
Confidence 357999999999999999999865 688999999964 23334566788999999999999999999988654
Q ss_pred CeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEecccc
Q 047901 579 RHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGT 658 (786)
Q Consensus 579 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~ 658 (786)
...++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 87 ~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (353)
T 2b9h_A 87 NEVYIIQELMQ-TDLHRVIST----QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGL 158 (353)
T ss_dssp CCEEEEECCCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEeccC-ccHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccc
Confidence 67899999997 599999875 3689999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCc----------ceeeccCccccCCCCCCCCchHHHHhh-hcCcCcccchHHHHHHHHHHHhCCCCCCcccc
Q 047901 659 AKLLKPNSSN----------WTELVGTFGYVAPAHGNIGLHLAELAY-TMKITEKCDVYSFGVLALEVIKGKHPGDFLSL 727 (786)
Q Consensus 659 a~~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~e~~~-~~~~~~~sDvwslGvil~elltg~~Pf~~~~~ 727 (786)
++........ .....||+.|+|| |... ...++.++|||||||++|||++|+.||.....
T Consensus 159 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 228 (353)
T 2b9h_A 159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAP----------EVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY 228 (353)
T ss_dssp CEECC----------------CCCCCCGGGCCH----------HHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccccccccccccCccccccchhhccccccccCC----------eeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCc
Confidence 9877532211 1234789999999 6554 46789999999999999999999999875431
Q ss_pred ccC----------------CCcchhhhhhhhccCCCCCCCh----hHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 728 FSS----------------SSSSINIEFNAMLDHRLPHPSL----DVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 728 ~~~----------------~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
... ...................+.. .....+..+.+++.+||+.||++|||++|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 229 RHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp HHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000 0000000011111110000100 00122345889999999999999999999986
No 258
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.2e-37 Score=347.15 Aligned_cols=255 Identities=17% Similarity=0.264 Sum_probs=200.5
Q ss_pred hccCccceeeccccCceEEEEEc-CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCC-CcccceeeEEecCCeee
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH-RNIVKFYGFCSHVRHSF 582 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-pniv~l~~~~~~~~~~~ 582 (786)
.++|++.+.||+|+||.||+|+. .+++.||||++..... ...+.+|+++++.++| ++|..+..++...+..+
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~------~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~ 79 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK------HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNV 79 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS------SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc------cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEE
Confidence 35799999999999999999985 5789999998765321 1247789999999987 55666666777888899
Q ss_pred EEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceee---CCCCcEEEeccccc
Q 047901 583 VVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLL---DLEYEARVSDFGTA 659 (786)
Q Consensus 583 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill---~~~~~~kl~Dfg~a 659 (786)
+||||+ +++|.+++... ...+++..++.++.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||++
T Consensus 80 lvme~~-g~sL~~ll~~~--~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla 153 (483)
T 3sv0_A 80 LVMDLL-GPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 153 (483)
T ss_dssp EEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTC
T ss_pred EEEECC-CCCHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcc
Confidence 999999 89999999753 35699999999999999999999999 99999999999999 57899999999999
Q ss_pred eecCCCCCc-------ceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCC
Q 047901 660 KLLKPNSSN-------WTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSS 732 (786)
Q Consensus 660 ~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~ 732 (786)
+........ .....||+.|+|| |.+.+..++.++|||||||++|||++|+.||.....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aP----------E~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~----- 218 (483)
T 3sv0_A 154 KKYRDTSTHQHIPYRENKNLTGTARYASV----------NTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKA----- 218 (483)
T ss_dssp EECBCTTTCCBCCCCCCCCCCSCTTTCCH----------HHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCC-----
T ss_pred eeccCCccccccccccccccCCCccccCH----------HHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccc-----
Confidence 987654321 1256799999999 888888899999999999999999999999875332
Q ss_pred cchhhhhhhhccCCCCCC-ChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 733 SSINIEFNAMLDHRLPHP-SLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
......+..+........ .......+.++.+++..||+.+|++||++++|++.|
T Consensus 219 ~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L 273 (483)
T 3sv0_A 219 GTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLF 273 (483)
T ss_dssp SSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHH
T ss_pred hhHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHH
Confidence 111111222211111111 001112234689999999999999999999998764
No 259
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=5.7e-38 Score=337.12 Aligned_cols=253 Identities=21% Similarity=0.344 Sum_probs=198.3
Q ss_pred hccCccceeeccccCceEEEEEc-CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHH-HhhcCCCcccceeeEEecCCeee
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKA-LTKIRHRNIVKFYGFCSHVRHSF 582 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~-l~~l~hpniv~l~~~~~~~~~~~ 582 (786)
.++|+..+.||+|+||+||+|+. .+++.||||++..... ......+..|..+ ++.++||||+++++++...+..+
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 126 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN---SQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVW 126 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCC---CHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccC---cHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEE
Confidence 45788999999999999999985 4788999999975322 2334556666665 77789999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEecccccee
Q 047901 583 VVYEYINRGSLATVLSNN-FASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKL 661 (786)
Q Consensus 583 lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~ 661 (786)
+||||+++ +|.+++... .....+++..+..++.|++.||+|||+. .+|+||||||+||+++.++.+||+|||+++.
T Consensus 127 lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~--~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 203 (340)
T 3an0_A 127 ICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGY 203 (340)
T ss_dssp EEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCSCCSTTEEECSTTCEEECCCSHHHH
T ss_pred EEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeeCCCcee
Confidence 99999986 999888642 1245789999999999999999999973 2899999999999999999999999999987
Q ss_pred cCCCCCcceeeccCccccCCCCCCCCchHHHHh----hhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhh
Q 047901 662 LKPNSSNWTELVGTFGYVAPAHGNIGLHLAELA----YTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINI 737 (786)
Q Consensus 662 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~----~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~ 737 (786)
.... .......||+.|+|| |.. ....++.++|||||||++|||++|+.||.... ....
T Consensus 204 ~~~~-~~~~~~~gt~~y~aP----------E~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~-------~~~~ 265 (340)
T 3an0_A 204 LVDS-VAKTIDAGCKPYMAP----------ERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG-------TPFQ 265 (340)
T ss_dssp HSCH-HHHHHSSCCCCCCCH----------HHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCS-------CHHH
T ss_pred cccc-cccccCCCCccccCc----------cccccccccCCCCchhhHHHHHHHHHHHHHCCCCCcccc-------chHH
Confidence 6532 112234799999999 554 33468899999999999999999999987421 1112
Q ss_pred hhhhhccCCCC-CCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 738 EFNAMLDHRLP-HPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 738 ~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.....+..... .+. ...+..+.+++..||..||++|||+.|+++
T Consensus 266 ~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 266 QLKQVVEEPSPQLPA---DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp HHHHHHHSCCCCCCG---GGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHhcCCCCCCCc---ccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 22233332222 121 122345899999999999999999999975
No 260
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.4e-37 Score=326.11 Aligned_cols=254 Identities=20% Similarity=0.325 Sum_probs=187.1
Q ss_pred hccCccceeeccccCceEEEEEc-CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|+..+.||+|+||+||+|+. .+++.||||++.... ......+.+.++...++.++||||+++++++.+.+..++
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~l 83 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATV--NSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 83 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC-----CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeeccc--CcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEE
Confidence 46799999999999999999986 478899999997532 222233344455556888899999999999999999999
Q ss_pred EEeccCCCCHHHHhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceec
Q 047901 584 VYEYINRGSLATVLSNN-FASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLL 662 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~ 662 (786)
||||+++ +|.+++... .....+++..+..++.|++.|++|||++ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 84 v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 84 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp EEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH--SCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred EEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 9999985 888877542 1245799999999999999999999984 28999999999999999999999999999876
Q ss_pred CCCCCcceeeccCccccCCCCCCCCchHHHHh----hhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhh
Q 047901 663 KPNSSNWTELVGTFGYVAPAHGNIGLHLAELA----YTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIE 738 (786)
Q Consensus 663 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~----~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~ 738 (786)
.... ......||+.|+|| |.. ....++.++||||+||++|||++|+.||.... .....
T Consensus 161 ~~~~-~~~~~~~t~~y~aP----------E~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-------~~~~~ 222 (290)
T 3fme_A 161 VDDV-AKDIDAGCKPYMAP----------ERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG-------TPFQQ 222 (290)
T ss_dssp ----------CCCCCCSCH----------HHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCS-------CHHHH
T ss_pred cccc-cccccCCCccccCh----------hhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccC-------chHHH
Confidence 5432 22334799999999 553 45678899999999999999999999986421 11222
Q ss_pred hhhhccCCCC-CCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 739 FNAMLDHRLP-HPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 739 ~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.......... .+. ...+..+.+++..||+.||++|||+.|+++
T Consensus 223 ~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 223 LKQVVEEPSPQLPA---DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp HHHHHHSCCCCCCT---TTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHhccCCCCccc---ccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 2222222222 111 112345889999999999999999999976
No 261
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2.1e-37 Score=358.96 Aligned_cols=252 Identities=23% Similarity=0.354 Sum_probs=201.0
Q ss_pred HhccCccceeeccccCceEEEEEcCC----CCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCC
Q 047901 504 RTKDFDAKYCIGKGEHRSVYRAKLPS----GDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVR 579 (786)
Q Consensus 504 ~~~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~ 579 (786)
..++|++.+.||+|+||+||+|.+.. +..||||++... ......+.|.+|+.++++++||||+++++++.+ +
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~ 463 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC---TSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-N 463 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST---TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-S
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc---CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-C
Confidence 34678899999999999999998642 457999998652 233455789999999999999999999999854 5
Q ss_pred eeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccc
Q 047901 580 HSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTA 659 (786)
Q Consensus 580 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a 659 (786)
..++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 464 ~~~lv~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a 538 (656)
T 2j0j_A 464 PVWIIMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLS 538 (656)
T ss_dssp SCEEEEECCTTCBHHHHHHHT--TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCC
T ss_pred ceEEEEEcCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCC
Confidence 689999999999999999764 34689999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCC-cceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCccccccCCCcchhh
Q 047901 660 KLLKPNSS-NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFLSLFSSSSSSINI 737 (786)
Q Consensus 660 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~~~~~~~~~~~~~ 737 (786)
+....... ......+|+.|+|| |...+..++.++|||||||++|||++ |..||..... ..
T Consensus 539 ~~~~~~~~~~~~~~~~t~~y~aP----------E~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~--------~~ 600 (656)
T 2j0j_A 539 RYMEDSTYYKASKGKLPIKWMAP----------ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN--------ND 600 (656)
T ss_dssp CSCCC----------CCGGGCCH----------HHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HH
T ss_pred eecCCCcceeccCCCCCcceeCH----------HHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH--------HH
Confidence 87754322 12234577899999 78888899999999999999999997 9999874321 12
Q ss_pred hhhhhccC-CCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 738 EFNAMLDH-RLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 738 ~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
....+... +...+... +..+.+++..||+.||++|||+.|+++.|
T Consensus 601 ~~~~i~~~~~~~~~~~~----~~~l~~li~~~l~~dP~~RPs~~el~~~L 646 (656)
T 2j0j_A 601 VIGRIENGERLPMPPNC----PPTLYSLMTKCWAYDPSRRPRFTELKAQL 646 (656)
T ss_dssp HHHHHHHTCCCCCCTTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHHHcCCCCCCCccc----cHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 22222222 22233322 34588999999999999999999998864
No 262
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.5e-37 Score=337.60 Aligned_cols=256 Identities=21% Similarity=0.321 Sum_probs=194.6
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCee--
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHS-- 581 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~-- 581 (786)
.++|...+.||+|+||+||+|+.. +++.||||++.... ......+.+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 118 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF--QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRN 118 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTT
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccc--cchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccc
Confidence 457999999999999999999854 68899999997532 2334567889999999999999999999999876654
Q ss_pred ----eEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccc
Q 047901 582 ----FVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFG 657 (786)
Q Consensus 582 ----~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg 657 (786)
++||||++ ++|.+++. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 119 ~~~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg 189 (371)
T 4exu_A 119 FYDFYLVMPFMQ-TDLQKIMG-----MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFG 189 (371)
T ss_dssp CCCCEEEEECCC-EEHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTT
T ss_pred ceeEEEEEcccc-ccHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecC
Confidence 99999998 58888874 3489999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhh-cCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcc--
Q 047901 658 TAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYT-MKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSS-- 734 (786)
Q Consensus 658 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~-~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~-- 734 (786)
+++..... .....||+.|+|| |...+ ..++.++|||||||++|||++|+.||............
T Consensus 190 ~a~~~~~~---~~~~~~t~~y~aP----------E~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~ 256 (371)
T 4exu_A 190 LARHADAE---MTGYVVTRWYRAP----------EVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILK 256 (371)
T ss_dssp CC-----------CTTCCCTTSCH----------HHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred cccccccC---cCCcccCccccCH----------HHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence 99866432 2345789999999 66655 67899999999999999999999999754321000000
Q ss_pred -------------hhhhhhhhccCCCCCCChhH----HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 735 -------------INIEFNAMLDHRLPHPSLDV----QEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 735 -------------~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
...............+.... ...+..+.+++..||+.||++|||++|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 257 VTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp HHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 00000000000000010001 112356899999999999999999999985
No 263
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.5e-37 Score=332.76 Aligned_cols=251 Identities=22% Similarity=0.275 Sum_probs=172.3
Q ss_pred hccCccce-eeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHH-HHHhhcCCCcccceeeEEec----
Q 047901 505 TKDFDAKY-CIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEI-KALTKIRHRNIVKFYGFCSH---- 577 (786)
Q Consensus 505 ~~~~~~~~-~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~-~~l~~l~hpniv~l~~~~~~---- 577 (786)
.++|.+.+ .||+|+||+||+|+.. +++.||||++.. .. ...+|+ ..++.+.||||+++++++..
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~-----~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~ 97 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYD-----SP----KARQEVDHHWQASGGPHIVCILDVYENMHHG 97 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEES-----SH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecC-----cH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCC
Confidence 46788854 6999999999999866 789999999854 11 122333 33566789999999999865
Q ss_pred CCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCC---CCcEEEe
Q 047901 578 VRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDL---EYEARVS 654 (786)
Q Consensus 578 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~---~~~~kl~ 654 (786)
....++||||+++|+|.+++... ....+++..++.++.|++.||.|||+. +|+||||||+||+++. ++.+||+
T Consensus 98 ~~~~~lv~e~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~ 173 (336)
T 3fhr_A 98 KRCLLIIMECMEGGELFSRIQER-GDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLT 173 (336)
T ss_dssp EEEEEEEEECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred CceEEEEEeccCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEe
Confidence 45589999999999999999865 335799999999999999999999999 9999999999999976 4569999
Q ss_pred ccccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcc
Q 047901 655 DFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSS 734 (786)
Q Consensus 655 Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~ 734 (786)
|||+++..... ......||+.|+|| |......++.++|||||||++|+|++|+.||.........
T Consensus 174 Dfg~~~~~~~~--~~~~~~~t~~y~aP----------E~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--- 238 (336)
T 3fhr_A 174 DFGFAKETTQN--ALQTPCYTPYYVAP----------EVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAIS--- 238 (336)
T ss_dssp CCTTCEEC----------------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC------------
T ss_pred ccccceecccc--ccccCCCCcCccCh----------hhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhh---
Confidence 99999876533 23345789999999 5555667888999999999999999999998653321100
Q ss_pred hhhhhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 735 INIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 735 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
......+.......+.......+..+.+++..||+.||++|||++|+++
T Consensus 239 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 239 -PGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp -------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -hhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0001111111111121111223445889999999999999999999986
No 264
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=3.3e-37 Score=327.08 Aligned_cols=249 Identities=23% Similarity=0.349 Sum_probs=196.3
Q ss_pred hccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcC--CCcccceeeEEecCCeee
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIR--HRNIVKFYGFCSHVRHSF 582 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~--hpniv~l~~~~~~~~~~~ 582 (786)
.++|++.+.||+|+||.||+|+..+++.||||++.... ......+.+.+|++++++++ ||||+++++++...+..+
T Consensus 27 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~ 104 (313)
T 3cek_A 27 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE--ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 104 (313)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSS--CCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEE
T ss_pred cceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEecccc--ccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEE
Confidence 56799999999999999999998889999999997532 23345678999999999997 599999999999999999
Q ss_pred EEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceec
Q 047901 583 VVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLL 662 (786)
Q Consensus 583 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~ 662 (786)
+||| +.+++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++ ++.+||+|||+++..
T Consensus 105 lv~e-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~ 176 (313)
T 3cek_A 105 MVME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQM 176 (313)
T ss_dssp EEEC-CCSEEHHHHHHHC---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCC-
T ss_pred EEEe-cCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEE-CCeEEEeeccccccc
Confidence 9999 5678999999864 5689999999999999999999999 999999999999996 589999999999876
Q ss_pred CCCCC--cceeeccCccccCCCCCCCCchHHHHhhh-----------cCcCcccchHHHHHHHHHHHhCCCCCCcccccc
Q 047901 663 KPNSS--NWTELVGTFGYVAPAHGNIGLHLAELAYT-----------MKITEKCDVYSFGVLALEVIKGKHPGDFLSLFS 729 (786)
Q Consensus 663 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~e~~~~-----------~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~ 729 (786)
..... ......||+.|+|| |.... ..++.++||||||+++|||++|+.||....
T Consensus 177 ~~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~--- 243 (313)
T 3cek_A 177 QPDTTSVVKDSQVGTVNYMPP----------EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII--- 243 (313)
T ss_dssp -------------CCGGGCCH----------HHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCC---
T ss_pred cCccccccccCCCCCCCcCCH----------HHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHH---
Confidence 54322 12345799999999 55443 468889999999999999999999986422
Q ss_pred CCCcchhhhhhhhccCCC--CCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 730 SSSSSINIEFNAMLDHRL--PHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
..........+... ..+... +..+.+++..||+.||++|||+.|+++
T Consensus 244 ----~~~~~~~~~~~~~~~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 244 ----NQISKLHAIIDPNHEIEFPDIP----EKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp ----SHHHHHHHHHCTTSCCCCCCCS----CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ----HHHHHHHHHHhcccccCCcccc----hHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 11122233333222 222222 234889999999999999999999986
No 265
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.6e-38 Score=347.98 Aligned_cols=199 Identities=21% Similarity=0.363 Sum_probs=153.3
Q ss_pred ccCcc-ceeeccccCceEEEEEcC---CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEe--cCC
Q 047901 506 KDFDA-KYCIGKGEHRSVYRAKLP---SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCS--HVR 579 (786)
Q Consensus 506 ~~~~~-~~~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~--~~~ 579 (786)
+.|+. +++||+|+||+||+|+.+ +++.||||++... .....+.+|+++++.++||||+++++++. ...
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~------~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 93 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT------GISMSACREIALLRELKHPNVISLQKVFLSHADR 93 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS------SCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTT
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC------CCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCC
Confidence 34666 457999999999999865 5788999999642 12246789999999999999999999994 467
Q ss_pred eeeEEEeccCCCCHHHHhhcC------CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceee----CCCC
Q 047901 580 HSFVVYEYINRGSLATVLSNN------FASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLL----DLEY 649 (786)
Q Consensus 580 ~~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill----~~~~ 649 (786)
..++||||+++ +|.+++... .....+++..++.++.|++.||+|||+. +|+||||||+|||+ +.++
T Consensus 94 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~ 169 (405)
T 3rgf_A 94 KVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERG 169 (405)
T ss_dssp EEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTT
T ss_pred eEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCC
Confidence 89999999975 888887532 1223589999999999999999999999 99999999999999 6779
Q ss_pred cEEEeccccceecCCCC---CcceeeccCccccCCCCCCCCchHHHHhhh-cCcCcccchHHHHHHHHHHHhCCCCCCc
Q 047901 650 EARVSDFGTAKLLKPNS---SNWTELVGTFGYVAPAHGNIGLHLAELAYT-MKITEKCDVYSFGVLALEVIKGKHPGDF 724 (786)
Q Consensus 650 ~~kl~Dfg~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~-~~~~~~sDvwslGvil~elltg~~Pf~~ 724 (786)
.+||+|||+|+...... ......+||+.|+|| |++.+ ..++.++||||+||++|||++|+.||..
T Consensus 170 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 238 (405)
T 3rgf_A 170 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP----------ELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 238 (405)
T ss_dssp CEEECCTTCCC----------------CCCTTCCH----------HHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred cEEEEECCCceecCCCCcccccCCCceecCcccCc----------hhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCC
Confidence 99999999998765432 223456899999999 66665 4589999999999999999999999964
No 266
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.6e-37 Score=331.67 Aligned_cols=255 Identities=20% Similarity=0.321 Sum_probs=197.3
Q ss_pred HhccCccceeeccccCceEEEEEc--CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhc---CCCcccceeeEEe--
Q 047901 504 RTKDFDAKYCIGKGEHRSVYRAKL--PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI---RHRNIVKFYGFCS-- 576 (786)
Q Consensus 504 ~~~~~~~~~~ig~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l---~hpniv~l~~~~~-- 576 (786)
..++|++.+.||+|+||+||+|+. .+++.||||++....... .....+.+|+++++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~ 86 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE--GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS 86 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT--SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEE
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccc--cCCchhhHHHHHHHhhhccCCCCeEeeeeeeeec
Confidence 356899999999999999999986 467889999986532211 1122455777776666 8999999999987
Q ss_pred ---cCCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEE
Q 047901 577 ---HVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARV 653 (786)
Q Consensus 577 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl 653 (786)
.....++||||++ |+|.+++... ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl 161 (326)
T 1blx_A 87 RTDRETKLTLVFEHVD-QDLTTYLDKV-PEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKL 161 (326)
T ss_dssp ECSSEEEEEEEEECCS-CBHHHHHHHS-CTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEE
T ss_pred ccCCCceEEEEEecCC-CCHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEE
Confidence 5567899999998 5999999865 234589999999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCc
Q 047901 654 SDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSS 733 (786)
Q Consensus 654 ~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~ 733 (786)
+|||.++..... .......||+.|+|| |...+..++.++|||||||++|||++|+.||......
T Consensus 162 ~Dfg~~~~~~~~-~~~~~~~~~~~y~aP----------E~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----- 225 (326)
T 1blx_A 162 ADFGLARIYSFQ-MALTSVVVTLWYRAP----------EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV----- 225 (326)
T ss_dssp CSCCSCCCCCGG-GGGCCCCCCCTTCCH----------HHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-----
T ss_pred ecCcccccccCC-CCccccccccceeCH----------HHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH-----
Confidence 999999866432 223446789999999 7777888999999999999999999999998753321
Q ss_pred chhhhhhhhc----------------------cCCCCCC-ChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 734 SINIEFNAML----------------------DHRLPHP-SLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 734 ~~~~~~~~~~----------------------~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.....+. ......+ .......+..+.+++.+||..||++|||+.|+++
T Consensus 226 ---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 226 ---DQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp ---HHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---HHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000000 0000000 0001122345889999999999999999999985
No 267
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=9.5e-37 Score=328.58 Aligned_cols=307 Identities=23% Similarity=0.314 Sum_probs=204.4
Q ss_pred cCCCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCCCCCCCCCCcE
Q 047901 22 FSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFPPICNLSNLKY 101 (786)
Q Consensus 22 f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~ 101 (786)
+..+++|++|++++|.+..+ + .+..+++|++|+|++|+++.+.+ |..+++|++|+|++|+++.+ +.+..+++|++
T Consensus 40 ~~~l~~L~~L~l~~~~i~~~-~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~-~~~~~l~~L~~ 114 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVASI-Q-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI-SALQNLTNLRE 114 (347)
T ss_dssp HHHHTTCSEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-GGGTTCTTCSE
T ss_pred chhcccccEEEEeCCccccc-h-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc-hHHcCCCcCCE
Confidence 34556666666666666543 2 26666666666666666664433 66666666666666666543 34556666666
Q ss_pred EEccCCcCcccCchhhcccCCcceeccccccccccCChhhhccCccceeecccccccCCCCCcCCCCCCcEEEccCcccc
Q 047901 102 ISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLT 181 (786)
Q Consensus 102 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~ 181 (786)
|+|++|+++++.+ +..+++|++|++++|... ..++.+..+++|+.|++++|.++
T Consensus 115 L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~------------------------~~~~~~~~l~~L~~L~l~~~~~~ 168 (347)
T 4fmz_A 115 LYLNEDNISDISP--LANLTKMYSLNLGANHNL------------------------SDLSPLSNMTGLNYLTVTESKVK 168 (347)
T ss_dssp EECTTSCCCCCGG--GTTCTTCCEEECTTCTTC------------------------CCCGGGTTCTTCCEEECCSSCCC
T ss_pred EECcCCcccCchh--hccCCceeEEECCCCCCc------------------------ccccchhhCCCCcEEEecCCCcC
Confidence 6666666664433 556666666666666433 22333455566666666666665
Q ss_pred cccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCCCCcc
Q 047901 182 GNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELG 261 (786)
Q Consensus 182 ~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~ 261 (786)
++.+ +..+++|++|++++|++.++.+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++..+ +.
T Consensus 169 ~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~ 240 (347)
T 4fmz_A 169 DVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LA 240 (347)
T ss_dssp CCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GT
T ss_pred Cchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hh
Confidence 5433 6666777777777777765544 6667777777777777765433 6667777777777777765433 67
Q ss_pred cccccccccccccccCCCCccccccCCcCceeccccccccccchhhhhcccCCcEEEecccccCCCcchHHhhhcCcCee
Q 047901 262 RLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQEIPEDLALLAHLSEL 341 (786)
Q Consensus 262 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 341 (786)
.+++|+.|++++|.++++ ..+..+++|+.|++++|+++.+ ..+..+++|++|++++|.+++..+..|..+++|+.|
T Consensus 241 ~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 316 (347)
T 4fmz_A 241 NLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTL 316 (347)
T ss_dssp TCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEE
T ss_pred cCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEE
Confidence 777777777777777754 4577778888888888888775 457778888888888888887777888888888888
Q ss_pred eccCCccCCCCCcccccccccceecccccccc
Q 047901 342 DLSHNLFKGSIPSRICNLESLEKLNLSHNNIS 373 (786)
Q Consensus 342 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 373 (786)
+|++|++++..| +..+++|+.|++++|+|+
T Consensus 317 ~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 317 FLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp ECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred EccCCccccccC--hhhhhccceeehhhhccc
Confidence 888888886555 777888888888888875
No 268
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.1e-36 Score=328.07 Aligned_cols=307 Identities=24% Similarity=0.343 Sum_probs=252.0
Q ss_pred ccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCCCCCCCCCCcEEEccCCcCcccCchhhcccCCcce
Q 047901 46 VRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFPPICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSY 125 (786)
Q Consensus 46 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 125 (786)
+..+++|++|++++|.++.+ + .|..+++|++|+|++|+++++++ +..+++|++|+|++|+++.+ ..|.++++|++
T Consensus 40 ~~~l~~L~~L~l~~~~i~~~-~-~~~~~~~L~~L~l~~n~i~~~~~-~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~~ 114 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVASI-Q-GIEYLTNLEYLNLNGNQITDISP-LSNLVKLTNLYIGTNKITDI--SALQNLTNLRE 114 (347)
T ss_dssp HHHHTTCSEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCSE
T ss_pred chhcccccEEEEeCCccccc-h-hhhhcCCccEEEccCCccccchh-hhcCCcCCEEEccCCcccCc--hHHcCCCcCCE
Confidence 45667777777777777643 2 36777777777777777776554 66777777777777777653 24666777777
Q ss_pred eccccccccccCChhhhccCccceeecccccccCCCCCcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccc
Q 047901 126 LMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFY 205 (786)
Q Consensus 126 L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~ 205 (786)
|++++|++++ .++ +.++++|+.|++++|...... ..+..+++|++|++++|.+.
T Consensus 115 L~l~~n~i~~------------------------~~~-~~~l~~L~~L~l~~n~~~~~~-~~~~~l~~L~~L~l~~~~~~ 168 (347)
T 4fmz_A 115 LYLNEDNISD------------------------ISP-LANLTKMYSLNLGANHNLSDL-SPLSNMTGLNYLTVTESKVK 168 (347)
T ss_dssp EECTTSCCCC------------------------CGG-GTTCTTCCEEECTTCTTCCCC-GGGTTCTTCCEEECCSSCCC
T ss_pred EECcCCcccC------------------------chh-hccCCceeEEECCCCCCcccc-cchhhCCCCcEEEecCCCcC
Confidence 7777766652 222 567788999999999655433 34899999999999999998
Q ss_pred cccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCCCCcccccccccccccccccCCCCccccc
Q 047901 206 GEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALG 285 (786)
Q Consensus 206 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 285 (786)
.+.+ +..+++|++|++++|.+.+..+ +..+++|+.|++++|.+.+..+ +..+++|+.|++++|++++..+ +.
T Consensus 169 ~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~ 240 (347)
T 4fmz_A 169 DVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LA 240 (347)
T ss_dssp CCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GT
T ss_pred Cchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hh
Confidence 7655 8899999999999999996543 8899999999999999986554 8899999999999999997655 89
Q ss_pred cCCcCceeccccccccccchhhhhcccCCcEEEecccccCCCcchHHhhhcCcCeeeccCCccCCCCCccccccccccee
Q 047901 286 LLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQEIPEDLALLAHLSELDLSHNLFKGSIPSRICNLESLEKL 365 (786)
Q Consensus 286 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 365 (786)
.+++|+.|++++|.++.+ ..+..+++|++|++++|.+++. ..+..+++|+.|++++|++++..+..|.++++|+.|
T Consensus 241 ~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 316 (347)
T 4fmz_A 241 NLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTL 316 (347)
T ss_dssp TCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEE
T ss_pred cCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEE
Confidence 999999999999999986 5688999999999999999875 468999999999999999998888999999999999
Q ss_pred ccccccccccCCcccccCCCceEEeccCCccc
Q 047901 366 NLSHNNISGQIPACFIGMSGLLSIDISYNELR 397 (786)
Q Consensus 366 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 397 (786)
++++|++++..| +..+++|+.|++++|+++
T Consensus 317 ~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 317 FLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp ECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred EccCCccccccC--hhhhhccceeehhhhccc
Confidence 999999998877 889999999999999986
No 269
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=2.2e-37 Score=342.93 Aligned_cols=247 Identities=23% Similarity=0.324 Sum_probs=185.1
Q ss_pred cCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhc-CCCcccceeeEEecCCeeeEEE
Q 047901 507 DFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSFVVY 585 (786)
Q Consensus 507 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~lv~ 585 (786)
.|...+.||+|+||+||.+...+|+.||||++.. ...+.+.+|+++++++ +||||+++++++.+.+..++||
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~-------~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~ 88 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLI-------DFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIAL 88 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEG-------GGHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcH-------HHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEE
Confidence 3555688999999999877666799999999854 2345678999999886 8999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCCCCC----CCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCC-------------
Q 047901 586 EYINRGSLATVLSNNFASED----FDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLE------------- 648 (786)
Q Consensus 586 e~~~~g~L~~~l~~~~~~~~----~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~------------- 648 (786)
||++ |+|.+++........ .++..++.++.|++.||+|||+. +|+||||||+|||++.+
T Consensus 89 E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~ 164 (434)
T 2rio_A 89 ELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAEN 164 (434)
T ss_dssp CCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCS
T ss_pred ecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCc
Confidence 9996 599999976522111 13334578999999999999999 99999999999999654
Q ss_pred CcEEEeccccceecCCCCCc----ceeeccCccccCCCCCCCCchHHHHhhh-------cCcCcccchHHHHHHHHHHHh
Q 047901 649 YEARVSDFGTAKLLKPNSSN----WTELVGTFGYVAPAHGNIGLHLAELAYT-------MKITEKCDVYSFGVLALEVIK 717 (786)
Q Consensus 649 ~~~kl~Dfg~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~e~~~~-------~~~~~~sDvwslGvil~ellt 717 (786)
+.+||+|||+|+........ .....||+.|+|| |+..+ ..++.++|||||||++|||+|
T Consensus 165 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aP----------E~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt 234 (434)
T 2rio_A 165 LRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAP----------ELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234 (434)
T ss_dssp CEEEECCCTTCEECCC--------------CCTTSCH----------HHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHT
T ss_pred eEEEEcccccceecCCCCccceeeecCCCCCCCccCH----------HHhccccccccccCcchhhhhHhHHHHHHHHHh
Confidence 48999999999987654321 2345799999999 55543 678999999999999999999
Q ss_pred -CCCCCCccccccCCCcchhhhhhhhccCCCCC---CChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 718 -GKHPGDFLSLFSSSSSSINIEFNAMLDHRLPH---PSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 718 -g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
|+.||..... .. ..+....... +.......+..+.+++.+||+.||++|||+.||++
T Consensus 235 ~g~~Pf~~~~~------~~----~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 235 KGKHPFGDKYS------RE----SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp TSCCTTCSTTT------HH----HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCCCCCCchh------hH----HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 9999864211 11 1111111111 11112344567899999999999999999999985
No 270
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=6.5e-37 Score=334.08 Aligned_cols=200 Identities=20% Similarity=0.265 Sum_probs=170.7
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcC-CC-----cccceeeEEec
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIR-HR-----NIVKFYGFCSH 577 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-hp-----niv~l~~~~~~ 577 (786)
.++|++.+.||+|+||+||+|+.. +++.||||++.. .......+..|+.+++.++ |+ +|+++++++..
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~ 127 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKN-----KKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF 127 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECS-----SHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEec-----cHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc
Confidence 468999999999999999999865 678899999964 2334567788999888885 55 49999999999
Q ss_pred CCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeC--CCCcEEEec
Q 047901 578 VRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLD--LEYEARVSD 655 (786)
Q Consensus 578 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~--~~~~~kl~D 655 (786)
.+..++||||+++ +|.+++... ....+++..+..++.|++.||.|||++ ..+|+||||||+|||++ .++.+||+|
T Consensus 128 ~~~~~lv~e~~~~-~L~~~l~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~D 204 (382)
T 2vx3_A 128 RNHLCLVFEMLSY-NLYDLLRNT-NFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVD 204 (382)
T ss_dssp TTEEEEEEECCCC-BHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECC
T ss_pred CCceEEEEecCCC-CHHHHHhhc-CcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEe
Confidence 9999999999964 999999865 235689999999999999999999952 12999999999999995 468899999
Q ss_pred cccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCcc
Q 047901 656 FGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFL 725 (786)
Q Consensus 656 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~ 725 (786)
||+|+..... .....||+.|+|| |+..+..++.++|||||||++|||++|+.||...
T Consensus 205 FG~a~~~~~~---~~~~~~t~~y~aP----------E~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 205 FGSSCQLGQR---IYQYIQSRFYRSP----------EVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CTTCEETTCC---CCSSCSCGGGCCH----------HHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccCceecccc---cccccCCccccCh----------HHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999887533 2345799999999 7888888999999999999999999999999753
No 271
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=2.5e-37 Score=341.01 Aligned_cols=256 Identities=24% Similarity=0.279 Sum_probs=190.3
Q ss_pred ccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecC------
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHV------ 578 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~------ 578 (786)
.+|+..+.||+|+||+||+|+.. +++.||||++..... .+.+|+++++.++||||+++++++...
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~--------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~ 125 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR--------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDE 125 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT--------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch--------hHHHHHHHHHHcCCCCccceeeEEeccCCCCcc
Confidence 46999999999999999999875 689999999865211 123799999999999999999988432
Q ss_pred CeeeEEEeccCCCCHHHHhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCC-CcEEEecc
Q 047901 579 RHSFVVYEYINRGSLATVLSNN-FASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLE-YEARVSDF 656 (786)
Q Consensus 579 ~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~-~~~kl~Df 656 (786)
...++||||+++ ++.+.+... .....+++..+..++.|++.||+|||+. +|+||||||+|||++.+ +.+||+||
T Consensus 126 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DF 201 (420)
T 1j1b_A 126 VYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDF 201 (420)
T ss_dssp EEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCC
T ss_pred eeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccc
Confidence 236799999986 676665431 1346789999999999999999999999 99999999999999965 67899999
Q ss_pred ccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhh-cCcCcccchHHHHHHHHHHHhCCCCCCccccccCCC---
Q 047901 657 GTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYT-MKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSS--- 732 (786)
Q Consensus 657 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~-~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~--- 732 (786)
|+|+....... .....||+.|+|| |++.+ ..++.++|||||||++|||++|+.||..........
T Consensus 202 G~a~~~~~~~~-~~~~~~t~~y~aP----------E~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~ 270 (420)
T 1j1b_A 202 GSAKQLVRGEP-NVSYICSRYYRAP----------ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 270 (420)
T ss_dssp TTCEECCTTCC-CCSCCSCTTSCCH----------HHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred hhhhhcccCCC-ceeeeeCCCcCCH----------HHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 99997754322 2345789999999 66655 478999999999999999999999987543210000
Q ss_pred ----cchhhhhhhhcc--CCCCCC---ChhHH-----HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 733 ----SSINIEFNAMLD--HRLPHP---SLDVQ-----EKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 733 ----~~~~~~~~~~~~--~~~~~~---~~~~~-----~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
....+.+..+.. .....+ ...+. ..+..+.+++.+||..||++|||+.|+++
T Consensus 271 ~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 271 KVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 000001111100 000111 00011 12345889999999999999999999975
No 272
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.4e-37 Score=330.75 Aligned_cols=245 Identities=20% Similarity=0.299 Sum_probs=198.7
Q ss_pred HhccCccceeeccccCceEEEEEc-CCCCEEEEEEcCCCCCCCc--hhhHHHHHHHHHHHhhcC--CCcccceeeEEecC
Q 047901 504 RTKDFDAKYCIGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQ--MSDQKEFLNEIKALTKIR--HRNIVKFYGFCSHV 578 (786)
Q Consensus 504 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~--~~~~~~~~~e~~~l~~l~--hpniv~l~~~~~~~ 578 (786)
..++|++.+.||+|+||+||+|+. .+++.||||++........ ....+.+.+|+.++++++ ||||+++++++...
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 356799999999999999999985 4788999999875322110 112245668999999996 59999999999999
Q ss_pred CeeeEEEeccCC-CCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeC-CCCcEEEecc
Q 047901 579 RHSFVVYEYINR-GSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLD-LEYEARVSDF 656 (786)
Q Consensus 579 ~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~-~~~~~kl~Df 656 (786)
+..++|||++.+ ++|.+++... +.+++..+..++.|++.||+|||+. +|+||||||+||+++ .++.+||+||
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Df 194 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITER---GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDF 194 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCC
T ss_pred CcEEEEEEcCCCCccHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeC
Confidence 999999999976 8999999764 5689999999999999999999999 999999999999999 7799999999
Q ss_pred ccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCc-CcccchHHHHHHHHHHHhCCCCCCccccccCCCcch
Q 047901 657 GTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKI-TEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSI 735 (786)
Q Consensus 657 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~-~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~ 735 (786)
|+++..... ......||+.|+|| |...+..+ +.++|||||||++|||++|+.||....
T Consensus 195 g~~~~~~~~--~~~~~~gt~~y~aP----------E~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~--------- 253 (320)
T 3a99_A 195 GSGALLKDT--VYTDFDGTRVYSPP----------EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--------- 253 (320)
T ss_dssp TTCEECCSS--CBCCCCSCGGGSCH----------HHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH---------
T ss_pred ccccccccc--cccCCCCCccCCCh----------HHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh---------
Confidence 999877543 23345799999999 66666665 688999999999999999999986421
Q ss_pred hhhhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 736 NIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
. ........+... +..+.+++.+||+.||++|||++|+++
T Consensus 254 -~----~~~~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 254 -E----IIRGQVFFRQRV----SSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp -H----HHHCCCCCSSCC----CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -h----hhcccccccccC----CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1 111112222211 234889999999999999999999986
No 273
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1e-35 Score=330.61 Aligned_cols=352 Identities=22% Similarity=0.222 Sum_probs=264.3
Q ss_pred CeEEEEcCCCCCcccCCcCccCCCCCC-------------cEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCc
Q 047901 2 RVNSINLTSTGLKGTLQEFSFSSFPHL-------------AYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPP 68 (786)
Q Consensus 2 ~~~~l~l~~~~l~~~l~~~~f~~l~~L-------------~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 68 (786)
+++.|+++.|.+.|.+|. +|..+.+| ++|++++|+++++.. -.++|++|+|++|++++ .|.
T Consensus 35 ~L~~L~l~~n~~~~~~p~-~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp~----~~~~L~~L~l~~n~l~~-lp~ 108 (454)
T 1jl5_A 35 SKTEYYNAWSEWERNAPP-GNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPE----LPPHLESLVASCNSLTE-LPE 108 (454)
T ss_dssp CHHHHHHHHHHHHHTSCT-TSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCCS----CCTTCSEEECCSSCCSS-CCC
T ss_pred chhhhhccCCcccccCCc-ccccchhcchhhhhhhhccCCCEEEecCCccccCCC----CcCCCCEEEccCCcCCc-ccc
Confidence 355678888888888887 57777764 999999999976443 23789999999999986 554
Q ss_pred cccCCCCCCEEeCCCccCcccCCCCCCCCCCcEEEccCCcCcccCchhhcccCCcceeccccccccccCChhhhccCccc
Q 047901 69 EIGLLTHLFSLDLSLNQFSGTFPPICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLE 148 (786)
Q Consensus 69 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~ 148 (786)
. +++|++|++++|++++++.. .++|++|+|++|+++++ | .|+++++|++|++++|++++ +|..+ .+|+
T Consensus 109 ~---~~~L~~L~l~~n~l~~l~~~---~~~L~~L~L~~n~l~~l-p-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~ 176 (454)
T 1jl5_A 109 L---PQSLKSLLVDNNNLKALSDL---PPLLEYLGVSNNQLEKL-P-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLE 176 (454)
T ss_dssp C---CTTCCEEECCSSCCSCCCSC---CTTCCEEECCSSCCSSC-C-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCC
T ss_pred c---cCCCcEEECCCCccCcccCC---CCCCCEEECcCCCCCCC-c-ccCCCCCCCEEECCCCcCcc-cCCCc---cccc
Confidence 3 48899999999999875432 26899999999999974 4 59999999999999999985 55433 5899
Q ss_pred eeecccccccCCCCCcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCccc
Q 047901 149 ILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNI 228 (786)
Q Consensus 149 ~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l 228 (786)
.|++++|++++.+ .+.++++|+.|++++|++++++. ..++|++|++++|+++.+ | .|..+++|++|++++|++
T Consensus 177 ~L~L~~n~l~~l~-~~~~l~~L~~L~l~~N~l~~l~~----~~~~L~~L~l~~n~l~~l-p-~~~~l~~L~~L~l~~N~l 249 (454)
T 1jl5_A 177 FIAAGNNQLEELP-ELQNLPFLTAIYADNNSLKKLPD----LPLSLESIVAGNNILEEL-P-ELQNLPFLTTIYADNNLL 249 (454)
T ss_dssp EEECCSSCCSSCC-CCTTCTTCCEEECCSSCCSSCCC----CCTTCCEEECCSSCCSSC-C-CCTTCTTCCEEECCSSCC
T ss_pred EEECcCCcCCcCc-cccCCCCCCEEECCCCcCCcCCC----CcCcccEEECcCCcCCcc-c-ccCCCCCCCEEECCCCcC
Confidence 9999999998854 78899999999999999987543 236899999999999854 4 488999999999999999
Q ss_pred CCCCCccccCCccccEEEeecccccccCCCCcccccccccccccccccCCCCccccccCCcCceeccccccccccchhhh
Q 047901 229 TGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSILEAL 308 (786)
Q Consensus 229 ~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 308 (786)
++ +|.. +++|+.|++++|++++ +|.. .++|+.|++++|+++++.. -.++|+.|++++|+++++..
T Consensus 250 ~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~~----~~~~L~~L~l~~N~l~~i~~--- 314 (454)
T 1jl5_A 250 KT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLSE----LPPNLYYLNASSNEIRSLCD--- 314 (454)
T ss_dssp SS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEESC----CCTTCCEEECCSSCCSEECC---
T ss_pred Cc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcccC----cCCcCCEEECcCCcCCcccC---
Confidence 85 4432 4789999999999986 4443 3689999999999986321 12689999999999887431
Q ss_pred hcccCCcEEEecccccCCCcchHHhhhcCcCeeeccCCccCCCCCcccccccccceeccccccccc--cCCcccccC---
Q 047901 309 GFMFKLFYLNFSHNQFSQEIPEDLALLAHLSELDLSHNLFKGSIPSRICNLESLEKLNLSHNNISG--QIPACFIGM--- 383 (786)
Q Consensus 309 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l--- 383 (786)
..++|++|++++|++++ +|.. +++|+.|++++|++++ +|. .+++|+.|++++|++++ .+|..+..+
T Consensus 315 -~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n 385 (454)
T 1jl5_A 315 -LPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVEDLRMN 385 (454)
T ss_dssp -CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCEEECC
T ss_pred -CcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHhhhhc
Confidence 12589999999999986 4433 5889999999999984 555 46889999999999998 678888777
Q ss_pred ----------CCceEEeccCCcccc--cCCC
Q 047901 384 ----------SGLLSIDISYNELRG--PIPN 402 (786)
Q Consensus 384 ----------~~L~~L~l~~N~l~~--~~p~ 402 (786)
++|+.||+++|++++ .+|.
T Consensus 386 ~~~~~i~~~~~~L~~L~ls~N~l~~~~~iP~ 416 (454)
T 1jl5_A 386 SHLAEVPELPQNLKQLHVETNPLREFPDIPE 416 (454)
T ss_dssp C------------------------------
T ss_pred ccccccccccCcCCEEECCCCcCCccccchh
Confidence 889999999999997 5554
No 274
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=3e-37 Score=327.27 Aligned_cols=246 Identities=22% Similarity=0.308 Sum_probs=191.9
Q ss_pred HHhccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCc--hhhHHHHHHHHHHHhhc----CCCcccceeeEE
Q 047901 503 RRTKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQ--MSDQKEFLNEIKALTKI----RHRNIVKFYGFC 575 (786)
Q Consensus 503 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~--~~~~~~~~~e~~~l~~l----~hpniv~l~~~~ 575 (786)
...++|+..+.||+|+||.||+|+.. +++.||||++........ ......+.+|+.++.++ +||||+++++++
T Consensus 28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~ 107 (312)
T 2iwi_A 28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF 107 (312)
T ss_dssp -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence 34568999999999999999999864 788999999975322111 11233456789999888 899999999999
Q ss_pred ecCCeeeEEEec-cCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeC-CCCcEEE
Q 047901 576 SHVRHSFVVYEY-INRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLD-LEYEARV 653 (786)
Q Consensus 576 ~~~~~~~lv~e~-~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~-~~~~~kl 653 (786)
...+..++|||| +++++|.+++... +.+++..+..++.|++.||+|||+. +|+||||||+||+++ .++.+||
T Consensus 108 ~~~~~~~~v~e~~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl 181 (312)
T 2iwi_A 108 ETQEGFMLVLERPLPAQDLFDYITEK---GPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKL 181 (312)
T ss_dssp -----CEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEE
T ss_pred ecCCeEEEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEE
Confidence 999999999999 7899999999864 4689999999999999999999999 999999999999999 8899999
Q ss_pred eccccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcC-cccchHHHHHHHHHHHhCCCCCCccccccCCC
Q 047901 654 SDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKIT-EKCDVYSFGVLALEVIKGKHPGDFLSLFSSSS 732 (786)
Q Consensus 654 ~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~-~~sDvwslGvil~elltg~~Pf~~~~~~~~~~ 732 (786)
+|||+++..... ......||..|+|| |...+..+. .++||||||+++|||++|+.||....
T Consensus 182 ~dfg~~~~~~~~--~~~~~~~~~~y~aP----------E~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------ 243 (312)
T 2iwi_A 182 IDFGSGALLHDE--PYTDFDGTRVYSPP----------EWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------ 243 (312)
T ss_dssp CCCSSCEECCSS--CBCCCCSCTTTSCH----------HHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------
T ss_pred EEcchhhhcccC--cccccCCcccccCc----------eeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH------
Confidence 999999877543 23445799999999 666666654 58999999999999999999986421
Q ss_pred cchhhhhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 733 SSINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.........+... ...+.+++.+||+.||++|||++|+++
T Consensus 244 --------~~~~~~~~~~~~~----~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 244 --------EILEAELHFPAHV----SPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp --------HHHHTCCCCCTTS----CHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred --------HHhhhccCCcccC----CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1112222222222 234889999999999999999999986
No 275
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.2e-36 Score=333.22 Aligned_cols=305 Identities=19% Similarity=0.139 Sum_probs=210.1
Q ss_pred CeEEEEcCCCCCcccCCcCccCCCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeC
Q 047901 2 RVNSINLTSTGLKGTLQEFSFSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDL 81 (786)
Q Consensus 2 ~~~~l~l~~~~l~~~l~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 81 (786)
+++.|+++.+.+. .++...|..+++|++|+|++|.++++.+..|.++++|++|+|++|+|+++.|..|+.+++|++|+|
T Consensus 46 ~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 46 NQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCSEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEecCCchh-hCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 5788999999876 788878999999999999999999999999999999999999999999998999999999999999
Q ss_pred CCccCcccCCC-CCCCCCCcEEEccCCcCcccCchhhcccCCcceeccccccccccCChhhhccCccceeecccccccCC
Q 047901 82 SLNQFSGTFPP-ICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGS 160 (786)
Q Consensus 82 s~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~ 160 (786)
++|+++.+++. |..+++|++|+|++|+++++.+..|.++++|++|++++|++++. .+..+++|+.|++++|.+.+.
T Consensus 125 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~~ 201 (390)
T 3o6n_A 125 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLSTL 201 (390)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSEE
T ss_pred CCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccccc
Confidence 99999988876 68999999999999999999999999999999999999999864 245566777777777766532
Q ss_pred CCCcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCc
Q 047901 161 IPNLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSS 240 (786)
Q Consensus 161 ~~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 240 (786)
...++|+.|++++|.++.+... ..++|++|+|++|++++. ..+..+++|++|+|++|.++++.|..|..++
T Consensus 202 ----~~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 272 (390)
T 3o6n_A 202 ----AIPIAVEELDASHNSINVVRGP---VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQ 272 (390)
T ss_dssp ----ECCSSCSEEECCSSCCCEEECC---CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCS
T ss_pred ----CCCCcceEEECCCCeeeecccc---ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccc
Confidence 2234555666666665554322 134555555555555543 3445555555555555555554455555555
Q ss_pred cccEEEeecccccccCCCCcccccccccccccccccCCCCccccccCCcCceeccccccccccchhhhhcccCCcEEEec
Q 047901 241 QLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFS 320 (786)
Q Consensus 241 ~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 320 (786)
+|+.|+|++|++++ +|..+..+++|+.|+|++|+++. .|..+..+++|+.|++++|+++.++ +..+++|++|+++
T Consensus 273 ~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~N~i~~~~---~~~~~~L~~L~l~ 347 (390)
T 3o6n_A 273 RLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLS 347 (390)
T ss_dssp SCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECC
T ss_pred cCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCccee-cCccccccCcCCEEECCCCccceeC---chhhccCCEEEcC
Confidence 55555555555543 23333444445555555554442 2223344444444444444444332 2333344444444
Q ss_pred cccc
Q 047901 321 HNQF 324 (786)
Q Consensus 321 ~N~l 324 (786)
+|.+
T Consensus 348 ~N~~ 351 (390)
T 3o6n_A 348 HNDW 351 (390)
T ss_dssp SSCE
T ss_pred CCCc
Confidence 4444
No 276
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=5.7e-37 Score=331.02 Aligned_cols=255 Identities=21% Similarity=0.305 Sum_probs=193.4
Q ss_pred ccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCe----
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRH---- 580 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~---- 580 (786)
++|...+.||+|+||+||+|+.. +++.||||++.... ......+.+.+|+.+++.++||||+++++++...+.
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 101 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF--QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 101 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccc--cchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence 57999999999999999999864 68899999997532 233456788999999999999999999999977654
Q ss_pred --eeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEecccc
Q 047901 581 --SFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGT 658 (786)
Q Consensus 581 --~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~ 658 (786)
.++||||++ |+|.+++. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 102 YDFYLVMPFMQ-TDLQKIMG-----LKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CCCEEEEECCS-EEGGGTTT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred eeEEEEecccc-CCHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeeccc
Confidence 499999998 58888774 3489999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhh-cCcCcccchHHHHHHHHHHHhCCCCCCccccccCC------
Q 047901 659 AKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYT-MKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSS------ 731 (786)
Q Consensus 659 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~-~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~------ 731 (786)
++..... .....||+.|+|| |...+ ..++.++||||+||++|||++|+.||.........
T Consensus 173 ~~~~~~~---~~~~~~t~~y~aP----------E~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~ 239 (353)
T 3coi_A 173 ARHADAE---MTGYVVTRWYRAP----------EVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKV 239 (353)
T ss_dssp TTC-----------CCSBCCSCH----------HHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHH
T ss_pred ccCCCCC---ccccccCcCcCCH----------HHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 9865432 2345789999999 66655 67889999999999999999999998754321000
Q ss_pred ------------Ccchhhhh-hhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 732 ------------SSSINIEF-NAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 732 ------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
........ ..+...............+..+.+++.+||..||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 240 TGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00000000 000000000000011122345899999999999999999999985
No 277
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=7.7e-38 Score=332.97 Aligned_cols=252 Identities=22% Similarity=0.335 Sum_probs=194.6
Q ss_pred hccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeEE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVV 584 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 584 (786)
.++|++.+.||+|+||+||+|+.++ .||+|++...... ....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv 107 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDN--EDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII 107 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCC--CCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCC--HHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEE
Confidence 5679999999999999999998753 5999998754321 22334577899999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecCC
Q 047901 585 YEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKP 664 (786)
Q Consensus 585 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 664 (786)
|||+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++ ++.+||+|||+++....
T Consensus 108 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~ 181 (319)
T 2y4i_B 108 TSLCKGRTLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGV 181 (319)
T ss_dssp CBCCCSEEHHHHTTSS--CCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC----
T ss_pred eecccCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccccc
Confidence 9999999999999764 34688999999999999999999999 999999999999998 78999999999876532
Q ss_pred C-----CCcceeeccCccccCCCCCCCCchHHHHhhh---------cCcCcccchHHHHHHHHHHHhCCCCCCccccccC
Q 047901 665 N-----SSNWTELVGTFGYVAPAHGNIGLHLAELAYT---------MKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSS 730 (786)
Q Consensus 665 ~-----~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~---------~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~ 730 (786)
. ........||+.|+|| |.... ..++.++||||||+++|||++|+.||.....
T Consensus 182 ~~~~~~~~~~~~~~g~~~y~aP----------E~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--- 248 (319)
T 2y4i_B 182 LQAGRREDKLRIQNGWLCHLAP----------EIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPA--- 248 (319)
T ss_dssp ------CCSCBCCSGGGGTSCH----------HHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCH---
T ss_pred ccccccccccccCCCcccccCh----------HHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---
Confidence 1 1122345689999999 55442 4578899999999999999999999874321
Q ss_pred CCcchhhhhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 731 SSSSINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
......+.....+... ....+..+.+++..||..||++|||+.++++.|
T Consensus 249 -----~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l 297 (319)
T 2y4i_B 249 -----EAIIWQMGTGMKPNLS--QIGMGKEISDILLFCWAFEQEERPTFTKLMDML 297 (319)
T ss_dssp -----HHHHHHHHTTCCCCCC--CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHH
T ss_pred -----HHHHHHhccCCCCCCC--cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHH
Confidence 1111222221111100 001123488999999999999999999999864
No 278
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=9.7e-37 Score=329.58 Aligned_cols=252 Identities=19% Similarity=0.290 Sum_probs=197.3
Q ss_pred hccCccceeeccccCceEEEEEcC-CC-CEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCc------ccceeeEEe
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SG-DKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRN------IVKFYGFCS 576 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpn------iv~l~~~~~ 576 (786)
.++|++.+.||+|+||+||+|+.. ++ +.||||++.. .....+.+.+|+++++.++|++ ++.+++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~-----~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~ 92 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN-----VGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFN 92 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS-----CHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcc-----cccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeee
Confidence 357999999999999999999864 34 6899999864 2344567889999999997765 899999999
Q ss_pred cCCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceee-----------
Q 047901 577 HVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLL----------- 645 (786)
Q Consensus 577 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill----------- 645 (786)
..+..++||||+ ++++.+++... ....+++..+..++.|++.||+|||+. +|+||||||+|||+
T Consensus 93 ~~~~~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~ 167 (355)
T 2eu9_A 93 FHGHMCIAFELL-GKNTFEFLKEN-NFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNE 167 (355)
T ss_dssp ETTEEEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECC
T ss_pred eCCeEEEEEecc-CCChHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccc
Confidence 999999999999 66788877654 235689999999999999999999999 99999999999999
Q ss_pred --------CCCCcEEEeccccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh
Q 047901 646 --------DLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK 717 (786)
Q Consensus 646 --------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt 717 (786)
+.++.+||+|||+++..... .....||+.|+|| |...+..++.++|||||||++|||++
T Consensus 168 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aP----------E~~~~~~~~~~~Di~slG~il~el~~ 234 (355)
T 2eu9_A 168 HKSCEEKSVKNTSIRVADFGSATFDHEH---HTTIVATRHYRPP----------EVILELGWAQPCDVWSIGCILFEYYR 234 (355)
T ss_dssp C-CCCEEEESCCCEEECCCTTCEETTSC---CCSSCSCGGGCCH----------HHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred cccccccccCCCcEEEeecCcccccccc---ccCCcCCCcccCC----------eeeecCCCCCccchHHHHHHHHHHHh
Confidence 56789999999999875433 2345799999999 78888889999999999999999999
Q ss_pred CCCCCCccccccCCCcchhhhhhhhcc------------------CCCCCCC-------------------hhHHHHHHH
Q 047901 718 GKHPGDFLSLFSSSSSSINIEFNAMLD------------------HRLPHPS-------------------LDVQEKLIS 760 (786)
Q Consensus 718 g~~Pf~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~-------------------~~~~~~~~~ 760 (786)
|+.||....... .......... .....+. .........
T Consensus 235 g~~pf~~~~~~~-----~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (355)
T 2eu9_A 235 GFTLFQTHENRE-----HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQ 309 (355)
T ss_dssp SSCSCCCSSHHH-----HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHH
T ss_pred CCCCCCCCCHHH-----HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHH
Confidence 999987533110 0000000000 0000000 001122446
Q ss_pred HHHHHHhccCCCCCCCCCHHHHHH
Q 047901 761 IMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 761 l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
+.+++.+||+.||++|||++|+++
T Consensus 310 l~~li~~~L~~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 310 LFDLMRRMLEFDPAQRITLAEALL 333 (355)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHhcCChhhCcCHHHHhc
Confidence 889999999999999999999975
No 279
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=3.2e-36 Score=348.05 Aligned_cols=310 Identities=20% Similarity=0.175 Sum_probs=192.8
Q ss_pred CCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCCC-CCCCCCCcEEE
Q 047901 25 FPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFPP-ICNLSNLKYIS 103 (786)
Q Consensus 25 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~ 103 (786)
+++++.|++++|.+..+++..|.++++|++|+|++|+|+++.|..|..+++|++|+|++|.|+++++. |.++++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 34566666666666655555566666666666666666665555666666666666666666655543 45666666666
Q ss_pred ccCCcCcccCchhhcccCCcceeccccccccccCChhhhccCccceeecccccccCCCCCcCCCCCCcEEEccCcccccc
Q 047901 104 LHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGN 183 (786)
Q Consensus 104 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~ 183 (786)
|++|+|+++++..|.++++|++|+|++|.+++..|..|..+++|+.|++++|. |+++
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~-----------------------l~~~ 186 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNR-----------------------LTHV 186 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSC-----------------------CSBC
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCC-----------------------CCCc
Confidence 66666665555556666666666666666665555555555555555555554 4443
Q ss_pred cCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCCCCcccc
Q 047901 184 ISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRL 263 (786)
Q Consensus 184 ~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l 263 (786)
. +..+++|++|++++|.++++ ...++|+.|++++|.++.+.+.. .++|+.|+|++|.+++ +..+..+
T Consensus 187 ~---~~~l~~L~~L~l~~n~l~~l-----~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l 253 (597)
T 3oja_B 187 D---LSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLNY 253 (597)
T ss_dssp C---GGGCTTCSEEECCSSCCSEE-----ECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGGC
T ss_pred C---hhhhhhhhhhhcccCccccc-----cCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--ChhhccC
Confidence 2 33345555666666555532 22345666666666665332221 1466777777777664 3556677
Q ss_pred cccccccccccccCCCCccccccCCcCceeccccccccccchhhhhcccCCcEEEecccccCCCcchHHhhhcCcCeeec
Q 047901 264 ISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQEIPEDLALLAHLSELDL 343 (786)
Q Consensus 264 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 343 (786)
++|+.|+|++|.++++.|..|..+++|+.|+|++|.+++++ ..+..+++|+.|+|++|.++ .+|..+..+++|+.|+|
T Consensus 254 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~-~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L 331 (597)
T 3oja_B 254 PGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALN-LYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYL 331 (597)
T ss_dssp TTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCEEE-CSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEEC
T ss_pred CCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCCCC-cccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEEC
Confidence 77777777777777777777777777777777777777653 33455677777777777776 45666777788888888
Q ss_pred cCCccCCCCCcccccccccceecccccccccc
Q 047901 344 SHNLFKGSIPSRICNLESLEKLNLSHNNISGQ 375 (786)
Q Consensus 344 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 375 (786)
++|++++. + +..+++|+.|++++|++.+.
T Consensus 332 ~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 332 DHNSIVTL-K--LSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp CSSCCCCC-C--CCTTCCCSEEECCSSCEEHH
T ss_pred CCCCCCCc-C--hhhcCCCCEEEeeCCCCCCh
Confidence 88887743 2 45556677777777776543
No 280
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=7e-37 Score=333.15 Aligned_cols=252 Identities=19% Similarity=0.267 Sum_probs=197.0
Q ss_pred hccCccceeeccccCceEEEEEc-CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcC-----------CCccccee
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIR-----------HRNIVKFY 572 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-----------hpniv~l~ 572 (786)
.++|++.+.||+|+||+||+|+. .+++.||||++.. .....+.+.+|+.++++++ ||||++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~ 92 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG-----DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLL 92 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS-----CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCC
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecC-----CccchhhhhHHHHHHHHhhcccccchhccccchHHHHH
Confidence 35799999999999999999985 4788999999864 2334567889999999886 89999999
Q ss_pred eEEecCC----eeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeC--
Q 047901 573 GFCSHVR----HSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLD-- 646 (786)
Q Consensus 573 ~~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~-- 646 (786)
+++...+ ..++||||+ +++|.+++... ....+++..+..++.|++.||+|||+++ +|+||||||+|||++
T Consensus 93 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~ 168 (373)
T 1q8y_A 93 DHFNHKGPNGVHVVMVFEVL-GENLLALIKKY-EHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIV 168 (373)
T ss_dssp EEEEEEETTEEEEEEEECCC-CEEHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEE
T ss_pred HHhhccCCCCceEEEEEecC-CCCHHHHHHHh-hccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEecc
Confidence 9987544 789999999 88999999865 2356899999999999999999999952 899999999999994
Q ss_pred ----CCCcEEEeccccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCC
Q 047901 647 ----LEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPG 722 (786)
Q Consensus 647 ----~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf 722 (786)
..+.+||+|||+++..... .....||+.|+|| |...+..++.++|||||||++|||++|+.||
T Consensus 169 ~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aP----------E~~~~~~~~~~~Di~slG~il~el~~g~~pf 235 (373)
T 1q8y_A 169 DSPENLIQIKIADLGNACWYDEH---YTNSIQTREYRSP----------EVLLGAPWGCGADIWSTACLIFELITGDFLF 235 (373)
T ss_dssp ETTTTEEEEEECCCTTCEETTBC---CCSCCSCGGGCCH----------HHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC
T ss_pred CCCcCcceEEEcccccccccCCC---CCCCCCCccccCc----------HHHhCCCCCchHhHHHHHHHHHHHHhCCCCC
Confidence 4458999999999877533 2345799999999 7888888999999999999999999999999
Q ss_pred CccccccCCCcchhhhhhhhc------------------------------------------cCCCCCCChhHHHHHHH
Q 047901 723 DFLSLFSSSSSSINIEFNAML------------------------------------------DHRLPHPSLDVQEKLIS 760 (786)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~~~~~~~~~~ 760 (786)
......... ........+. ..... ........
T Consensus 236 ~~~~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 309 (373)
T 1q8y_A 236 EPDEGHSYT--KDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYK----FSKDEAKE 309 (373)
T ss_dssp -----------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTC----CCHHHHHH
T ss_pred CCCcccccC--ChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhccc----CCcchHHH
Confidence 753321100 0001111110 00111 12345567
Q ss_pred HHHHHHhccCCCCCCCCCHHHHHH
Q 047901 761 IMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 761 l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
+.+++..||+.||++|||++|+++
T Consensus 310 ~~~li~~~L~~dP~~Rpt~~ell~ 333 (373)
T 1q8y_A 310 ISDFLSPMLQLDPRKRADAGGLVN 333 (373)
T ss_dssp HHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred HHHHHHHHhccCccccCCHHHHhh
Confidence 899999999999999999999986
No 281
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.2e-37 Score=340.57 Aligned_cols=251 Identities=20% Similarity=0.259 Sum_probs=183.8
Q ss_pred hccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhc-CCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~l 583 (786)
..+|...+.||+|+||+||.....+++.||||++.... ...+.+|+++++.+ +||||+++++++.+....|+
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~-------~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~l 95 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC-------FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYI 95 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT-------EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEE
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH-------HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEE
Confidence 34688999999999999765555678999999996521 11345899999999 79999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCC-----CCcEEEecccc
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDL-----EYEARVSDFGT 658 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~-----~~~~kl~Dfg~ 658 (786)
||||++ |+|.+++.... ....+..+..++.|++.||+|||+. +|+||||||+||+++. ...+||+|||+
T Consensus 96 v~E~~~-g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~ 169 (432)
T 3p23_A 96 AIELCA-ATLQEYVEQKD--FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGL 169 (432)
T ss_dssp EEECCS-EEHHHHHHSSS--CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTE
T ss_pred EEECCC-CCHHHHHHhcC--CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccc
Confidence 999997 59999998652 2344445678999999999999999 9999999999999953 24688999999
Q ss_pred ceecCCCCC---cceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHh-CCCCCCccccccCCCcc
Q 047901 659 AKLLKPNSS---NWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIK-GKHPGDFLSLFSSSSSS 734 (786)
Q Consensus 659 a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~ellt-g~~Pf~~~~~~~~~~~~ 734 (786)
|+....... ......||+.|+|||++... ....++.++||||+||++|||++ |..||....
T Consensus 170 a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~-------~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~-------- 234 (432)
T 3p23_A 170 CKKLAVGRHSFSRRSGVPGTEGWIAPEMLSED-------CKENPTYTVDIFSAGCVFYYVISEGSHPFGKSL-------- 234 (432)
T ss_dssp EECC------------CCSCTTSCCGGGTSCC----------CCCTHHHHHHHHHHHHHHHTTSCBTTBSTT--------
T ss_pred eeeccCCCcceeeccccCCCcCccChhhhhcc-------cccCCCcHHHHHHHHHHHHHHHcCCCCCcchhh--------
Confidence 987754321 23346799999999533210 13567789999999999999999 999975321
Q ss_pred hhhhhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 735 INIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 735 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.........................+.+++.+||+.||++|||++|+++
T Consensus 235 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 235 -QRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp -THHHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -HHHHHHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 1111111111111000111223345789999999999999999999985
No 282
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.4e-37 Score=353.29 Aligned_cols=262 Identities=24% Similarity=0.283 Sum_probs=198.2
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEec------
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSH------ 577 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~------ 577 (786)
.++|++.+.||+|+||+||+|... +++.||||++... ......+.+.+|+++++.++||||+++++++..
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~---~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~ 89 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE---LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAP 89 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC---CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCT
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc---CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccC
Confidence 367999999999999999999864 6889999998652 234456789999999999999999999998765
Q ss_pred CCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCc---EEEe
Q 047901 578 VRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYE---ARVS 654 (786)
Q Consensus 578 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~---~kl~ 654 (786)
.+..++||||+++|+|.+++........+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+
T Consensus 90 ~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~ 166 (676)
T 3qa8_A 90 NDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKII 166 (676)
T ss_dssp TSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEEC
T ss_pred CCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEc
Confidence 677899999999999999998764445788999999999999999999999 9999999999999997664 9999
Q ss_pred ccccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCcccc---ccCC
Q 047901 655 DFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSL---FSSS 731 (786)
Q Consensus 655 Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~---~~~~ 731 (786)
|||.++...... ......||+.|+||| ...+..++.++||||+||++|||++|+.||..... +...
T Consensus 167 DFG~a~~~~~~~-~~~~~~gt~~Y~APE----------~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~ 235 (676)
T 3qa8_A 167 DLGYAKELDQGE-LCTEFVGTLQYLAPE----------LLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGK 235 (676)
T ss_dssp SCCCCCBTTSCC-CCCCCCSCCTTCSSC----------SSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTT
T ss_pred cccccccccccc-ccccccCCcccCChH----------HhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhh
Confidence 999998775443 234468999999995 44566789999999999999999999999864211 0000
Q ss_pred Ccc---hhhhhhh------hccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 047901 732 SSS---INIEFNA------MLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVC 783 (786)
Q Consensus 732 ~~~---~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~ 783 (786)
... ....... ......+.+.......+..+.+++..||.+||++|||+.|++
T Consensus 236 i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL 296 (676)
T 3qa8_A 236 VREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP 296 (676)
T ss_dssp CC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred hhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence 000 0000000 011111222222333456799999999999999999998754
No 283
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=3.6e-37 Score=328.97 Aligned_cols=260 Identities=22% Similarity=0.307 Sum_probs=179.1
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHH-HHhhcCCCcccceeeEEecCCeee
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIK-ALTKIRHRNIVKFYGFCSHVRHSF 582 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~-~l~~l~hpniv~l~~~~~~~~~~~ 582 (786)
.++|+..+.||+|+||.||+|... +++.||||++.... .......+..|+. +++.++||||+++++++...+..+
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~ 97 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV---DEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCW 97 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC---CHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc---CchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceE
Confidence 357999999999999999999865 78899999997532 2234455666666 677789999999999999999999
Q ss_pred EEEeccCCCCHHHHhhcC--CCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccce
Q 047901 583 VVYEYINRGSLATVLSNN--FASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAK 660 (786)
Q Consensus 583 lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~ 660 (786)
+||||+++ +|.+++... .....+++..+..++.|++.|+.|||+. ++|+||||||+||+++.++.+||+|||+++
T Consensus 98 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~ 174 (327)
T 3aln_A 98 ICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISG 174 (327)
T ss_dssp EEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCCSSSC
T ss_pred EEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccCCCce
Confidence 99999986 888877531 1246789999999999999999999985 389999999999999999999999999998
Q ss_pred ecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhh
Q 047901 661 LLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFN 740 (786)
Q Consensus 661 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~ 740 (786)
...... ......||+.|+|||.+... ..+..++.++|||||||++|||++|+.||...... .....
T Consensus 175 ~~~~~~-~~~~~~gt~~y~aPE~~~~~------~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~ 240 (327)
T 3aln_A 175 QLVDSI-AKTRDAGCRPYMAPERIDPS------ASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV-------FDQLT 240 (327)
T ss_dssp C-------------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------------C
T ss_pred eccccc-ccccCCCCccccCceeeccc------cCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH-------HHHHH
Confidence 765432 22334799999999643210 13556889999999999999999999998753211 01111
Q ss_pred hhccCCCC-CCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 741 AMLDHRLP-HPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 741 ~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
........ .+.......+..+.+++..||+.||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 241 QVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 11111111 111011112345889999999999999999999975
No 284
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=323.63 Aligned_cols=252 Identities=19% Similarity=0.288 Sum_probs=179.0
Q ss_pred hccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeE
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~l 583 (786)
.++|+..+.||+|+||+||+|+.. +++.||||++.... ......+.+..+..+++.++||||+++++++...+..++
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~l 101 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSG--NKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFI 101 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTS--CHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccc--cchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEE
Confidence 457999999999999999999875 78999999997532 122223344455557888899999999999999999999
Q ss_pred EEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEEcCCCCCceeeCCCCcEEEeccccceec
Q 047901 584 VYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHH-DCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLL 662 (786)
Q Consensus 584 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~-~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~ 662 (786)
||||+ ++.+..+.... ...+++..+..++.|++.||.|||+ . +|+||||||+||+++.++.+||+|||++...
T Consensus 102 v~e~~-~~~~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 175 (318)
T 2dyl_A 102 AMELM-GTCAEKLKKRM--QGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRL 175 (318)
T ss_dssp EECCC-SEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC---
T ss_pred EEecc-CCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhc
Confidence 99999 44555555432 3568999999999999999999998 5 8999999999999999999999999999776
Q ss_pred CCCCCcceeeccCccccCCCCCCCCchHHHHh-----hhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhh
Q 047901 663 KPNSSNWTELVGTFGYVAPAHGNIGLHLAELA-----YTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINI 737 (786)
Q Consensus 663 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~-----~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~ 737 (786)
.... ......||+.|+|| |.. ....++.++|||||||++|||++|+.||.... ....
T Consensus 176 ~~~~-~~~~~~~~~~y~aP----------E~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~~~~ 237 (318)
T 2dyl_A 176 VDDK-AKDRSAGCAAYMAP----------ERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCK-------TDFE 237 (318)
T ss_dssp ------------CCTTCCH----------HHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCC-------SHHH
T ss_pred cCCc-cccccCCCccccCh----------hhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCC-------ccHH
Confidence 5432 22345799999999 555 35568899999999999999999999987422 1122
Q ss_pred hhhhhccCCCC-CCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 738 EFNAMLDHRLP-HPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 738 ~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
....+...... .+.. ...+..+.+++..||+.||.+|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~--~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 238 VLTKVLQEEPPLLPGH--MGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp HHHHHHHSCCCCCCSS--SCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHhccCCCCCCcc--CCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 22222222221 1110 012235889999999999999999999975
No 285
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.6e-36 Score=316.67 Aligned_cols=229 Identities=14% Similarity=0.095 Sum_probs=181.4
Q ss_pred ccCccceeeccccCceEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeEE
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVV 584 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 584 (786)
++|++.+.||+|+||.||+|+.. +++.||||++..... ......+.+.+|+.+++.++||||+++++++...+..|+|
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGV-LPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCC-SCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccc-cCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 57999999999999999999865 588999999976432 2234567899999999999999999999999999999999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecCC
Q 047901 585 YEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKP 664 (786)
Q Consensus 585 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 664 (786)
|||+++++|.+++... ....++..++.|++.||+|||++ +|+||||||+||+++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~------- 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA------- 174 (286)
T ss_dssp EECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC-------
T ss_pred EEecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc-------
Confidence 9999999999999532 35567889999999999999999 99999999999999999999998543
Q ss_pred CCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhhcc
Q 047901 665 NSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAMLD 744 (786)
Q Consensus 665 ~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 744 (786)
|++| ++.++|||||||++|||+||+.||............ .....
T Consensus 175 -------------~~~~-----------------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~-----~~~~~ 219 (286)
T 3uqc_A 175 -------------TMPD-----------------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA-----ERDTA 219 (286)
T ss_dssp -------------CCTT-----------------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC-----CBCTT
T ss_pred -------------ccCC-----------------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH-----HHHhc
Confidence 4444 577999999999999999999999864432111000 00011
Q ss_pred CCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHhC
Q 047901 745 HRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQLL 786 (786)
Q Consensus 745 ~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~~L 786 (786)
.....+.......+..+.+++.+||++||++| |+.|+++.|
T Consensus 220 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L 260 (286)
T 3uqc_A 220 GQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLM 260 (286)
T ss_dssp SCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHH
T ss_pred cCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHH
Confidence 11111111111223458999999999999999 999999864
No 286
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=5.7e-35 Score=312.23 Aligned_cols=294 Identities=19% Similarity=0.184 Sum_probs=169.9
Q ss_pred eEEEEcCCCCCcccCCcCccCCCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCC
Q 047901 3 VNSINLTSTGLKGTLQEFSFSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLS 82 (786)
Q Consensus 3 ~~~l~l~~~~l~~~l~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 82 (786)
++.++++++++. .+|.. + .++|++|+|++|+++++.+..|.++++|++|+|++|+|+++.|..|..+++|++|+|+
T Consensus 33 l~~l~~~~~~l~-~lp~~-~--~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 33 LRVVQCSDLGLE-KVPKD-L--PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp TTEEECTTSCCC-SCCCS-C--CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CeEEEecCCCcc-ccCcc-C--CCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 455666666665 44442 1 2566677777777766666666777777777777777766666667777777777777
Q ss_pred CccCcccCCCCCCCCCCcEEEccCCcCcccCchhhcccCCcceeccccccccc--cCChhhhccCccceeecccccccCC
Q 047901 83 LNQFSGTFPPICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTG--QLPRNICRSGLLEILTVNDNHFLGS 160 (786)
Q Consensus 83 ~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~~~~L~~L~l~~N~l~~~ 160 (786)
+|+++.++..+. ++|++|++++|+++++.+..|.++++|++|++++|+++. ..+..+..+++|+.|++++|.++.+
T Consensus 109 ~n~l~~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l 186 (330)
T 1xku_A 109 KNQLKELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTI 186 (330)
T ss_dssp SSCCSBCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSC
T ss_pred CCcCCccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccC
Confidence 777665555443 567777777777766666666677777777777776642 4555566666666666666666554
Q ss_pred CCCcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCc
Q 047901 161 IPNLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSS 240 (786)
Q Consensus 161 ~~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 240 (786)
+..+. ++|+.|++++|+++++.+..|..+++|++|+|++|+++++.+..|..+++|++|+|++|+++ .+|..+..++
T Consensus 187 ~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~ 263 (330)
T 1xku_A 187 PQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHK 263 (330)
T ss_dssp CSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCS
T ss_pred Ccccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCC
Confidence 44332 45555555555555555555555555555555555555555555555555555555555555 3444455555
Q ss_pred cccEEEeecccccccCCCCcccccccccccccccccCCCCccccccCCcCceeccccccccc--cchhhhhcccCCcEEE
Q 047901 241 QLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNN--SILEALGFMFKLFYLN 318 (786)
Q Consensus 241 ~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~ 318 (786)
+|+.|+|++|+|+++.+..|+... .....+.|+.|++++|++.. +.+..|..+.+++.++
T Consensus 264 ~L~~L~l~~N~i~~~~~~~f~~~~------------------~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~ 325 (330)
T 1xku_A 264 YIQVVYLHNNNISAIGSNDFCPPG------------------YNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQ 325 (330)
T ss_dssp SCCEEECCSSCCCCCCTTSSSCSS------------------CCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEE
T ss_pred CcCEEECCCCcCCccChhhcCCcc------------------cccccccccceEeecCcccccccCccccccccceeEEE
Confidence 555555555555544444443220 00012455566666666543 4455666666666666
Q ss_pred ecccc
Q 047901 319 FSHNQ 323 (786)
Q Consensus 319 L~~N~ 323 (786)
|++|+
T Consensus 326 L~~N~ 330 (330)
T 1xku_A 326 LGNYK 330 (330)
T ss_dssp C----
T ss_pred ecccC
Confidence 66653
No 287
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.2e-35 Score=315.58 Aligned_cols=286 Identities=18% Similarity=0.169 Sum_probs=156.9
Q ss_pred CCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCC-CCCCCCCCcEEEcc
Q 047901 27 HLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFP-PICNLSNLKYISLH 105 (786)
Q Consensus 27 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~ 105 (786)
+++.+++++|.++.+ |..+. ++|++|+|++|+|+.+.|..|..+++|++|+|++|+++++.+ .+..+++|++|+|+
T Consensus 34 ~l~~l~~~~~~l~~i-p~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLKAV-PKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCSSC-CSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcccc-CCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 455555555555322 22221 345555555555554444455555555555555555554432 34455555555555
Q ss_pred CCcCcccCchhhcccCCcceeccccccccccCChhhhccCccceeecccccccC--C-CCCcCCCCCCcEEEccCccccc
Q 047901 106 NNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLG--S-IPNLRNCRSLVRAHLGRNNLTG 182 (786)
Q Consensus 106 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~--~-~~~l~~l~~L~~L~L~~N~l~~ 182 (786)
+|+++.+++..+ ++|++|++++|+++...+..|..+++|+.|++++|.++. . +..+..+ +|+.|++++|++++
T Consensus 111 ~n~l~~l~~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 111 KNHLVEIPPNLP---SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 186 (332)
T ss_dssp SSCCCSCCSSCC---TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS
T ss_pred CCcCCccCcccc---ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc
Confidence 555553333222 455555555555554444445555555555555555532 2 1223444 55555666666555
Q ss_pred ccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCCCCccc
Q 047901 183 NISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGR 262 (786)
Q Consensus 183 ~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~ 262 (786)
++...+ ++|++|+|++|+++++.+..|..+++|+.|+|++|+++++.+..|..+++|+.|+|++|+++ .+|..+..
T Consensus 187 l~~~~~---~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 262 (332)
T 2ft3_A 187 IPKDLP---ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPD 262 (332)
T ss_dssp CCSSSC---SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGG
T ss_pred cCcccc---CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhc
Confidence 433222 46666666666666666666666666666666666666555556666666666666666666 45555666
Q ss_pred ccccccccccccccCCCCcccccc------CCcCceecccccccc--ccchhhhhcccCCcEEEecccc
Q 047901 263 LISLNKLILRGNQLSGHLPRALGL------LTELEYFDLSSNRLN--NSILEALGFMFKLFYLNFSHNQ 323 (786)
Q Consensus 263 l~~L~~L~L~~N~l~~~~~~~~~~------l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~L~~N~ 323 (786)
+++|+.|++++|+|+++.+..|.. ..+|+.|++++|++. .+.+..|..+++|+.|++++|+
T Consensus 263 l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 263 LKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred CccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 666666666666666655555543 355777777777776 5666777777777777777764
No 288
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=5.8e-36 Score=315.22 Aligned_cols=230 Identities=20% Similarity=0.280 Sum_probs=179.6
Q ss_pred ccCccc-eeeccccCceEEEEEc-CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHH-hhcCCCcccceeeEEec----C
Q 047901 506 KDFDAK-YCIGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKAL-TKIRHRNIVKFYGFCSH----V 578 (786)
Q Consensus 506 ~~~~~~-~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l-~~l~hpniv~l~~~~~~----~ 578 (786)
++|.+. +.||+|+||+||+|.. .+++.||||++.. ...+.+|++++ +..+||||+++++++.. .
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~ 87 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD---------CPKARREVELHWRASQCPHIVRIVDVYENLYAGR 87 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC---------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc---------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCC
Confidence 467776 7799999999999986 4788999999853 13566888887 55689999999999876 6
Q ss_pred CeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCC---CCcEEEec
Q 047901 579 RHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDL---EYEARVSD 655 (786)
Q Consensus 579 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~---~~~~kl~D 655 (786)
...++||||+++|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~D 163 (299)
T 3m2w_A 88 KCLLIVMECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTD 163 (299)
T ss_dssp EEEEEEECCCCSCBHHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred ceEEEEEeecCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEec
Confidence 7789999999999999999875 335689999999999999999999999 9999999999999998 78999999
Q ss_pred cccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcch
Q 047901 656 FGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSI 735 (786)
Q Consensus 656 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~ 735 (786)
||++..... ..++.++||||+||++|||++|+.||..........
T Consensus 164 fg~a~~~~~--------------------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~--- 208 (299)
T 3m2w_A 164 FGFAKETTG--------------------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP--- 208 (299)
T ss_dssp CTTCEECTT--------------------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------C---
T ss_pred ccccccccc--------------------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhH---
Confidence 999865431 235678999999999999999999986533211000
Q ss_pred hhhhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 047901 736 NIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVCQ 784 (786)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~~ 784 (786)
.............+.......+..+.+++..||+.||++|||++|+++
T Consensus 209 -~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 209 -GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp -CSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -HHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 000111111222222112233456899999999999999999999986
No 289
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.9e-35 Score=341.50 Aligned_cols=346 Identities=21% Similarity=0.167 Sum_probs=278.1
Q ss_pred CCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCC-CCCCCCCCcEEEccCCcCcccCchhhcccCCccee
Q 047901 48 NLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFP-PICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYL 126 (786)
Q Consensus 48 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 126 (786)
.+.+++.|++++|.++.+.+..|..+++|++|+|++|.|+++++ .|..+++|++|+|++|.|++++|..|+++++|++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 35678888888888887777777888888888888888887765 57778888888888888887777777888888888
Q ss_pred ccccccccccCChhhhccCccceeecccccccCCCCCcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCcccc
Q 047901 127 MLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYG 206 (786)
Q Consensus 127 ~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~ 206 (786)
+|++|.+++.++.. +.++++|+.|+|++|.|+++.+..|..+++|++|+|++|++++
T Consensus 129 ~L~~n~l~~l~~~~-----------------------~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 185 (597)
T 3oja_B 129 VLERNDLSSLPRGI-----------------------FHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 185 (597)
T ss_dssp ECCSSCCCCCCTTT-----------------------TTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSB
T ss_pred EeeCCCCCCCCHHH-----------------------hccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCC
Confidence 88887776433332 3566777888888888888888899999999999999999997
Q ss_pred ccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCCCCcccccccccccccccccCCCCcccccc
Q 047901 207 EISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGL 286 (786)
Q Consensus 207 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 286 (786)
+. +..+++|+.|++++|.+++. ...++|+.|++++|.+....+..+ ++|+.|+|++|.+++. ..+..
T Consensus 186 ~~---~~~l~~L~~L~l~~n~l~~l-----~~~~~L~~L~ls~n~l~~~~~~~~---~~L~~L~L~~n~l~~~--~~l~~ 252 (597)
T 3oja_B 186 VD---LSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVVRGPVN---VELTILKLQHNNLTDT--AWLLN 252 (597)
T ss_dssp CC---GGGCTTCSEEECCSSCCSEE-----ECCTTCSEEECCSSCCCEEECSCC---SCCCEEECCSSCCCCC--GGGGG
T ss_pred cC---hhhhhhhhhhhcccCccccc-----cCCchhheeeccCCcccccccccC---CCCCEEECCCCCCCCC--hhhcc
Confidence 63 56788999999999999853 345789999999999986554433 5899999999999864 67899
Q ss_pred CCcCceeccccccccccchhhhhcccCCcEEEecccccCCCcchHHhhhcCcCeeeccCCccCCCCCcccccccccceec
Q 047901 287 LTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQEIPEDLALLAHLSELDLSHNLFKGSIPSRICNLESLEKLN 366 (786)
Q Consensus 287 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 366 (786)
+++|+.|+|++|.+.++.+..|..+++|++|+|++|.+++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+
T Consensus 253 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~ 330 (597)
T 3oja_B 253 YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLY 330 (597)
T ss_dssp CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEE
T ss_pred CCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEE
Confidence 9999999999999999999999999999999999999986 5666778999999999999999 6778889999999999
Q ss_pred cccccccccCCcccccCCCceEEeccCCcccccCCCCCccccCCCccccCCCCCCCCCCCccccccccccC
Q 047901 367 LSHNNISGQIPACFIGMSGLLSIDISYNELRGPIPNSTVFRNAPRESFLGNNFSTFYGTSDLLSHKEASKK 437 (786)
Q Consensus 367 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 437 (786)
|++|+|++.. +..+++|+.|++++|++.+..+. ..+.......+.++.. .|+.........|++.
T Consensus 331 L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~--~C~~~~~~~~~~cc~~ 395 (597)
T 3oja_B 331 LDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQ--HCKIDYQLEHGLCCKE 395 (597)
T ss_dssp CCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCC--CCCTTCEEETTEEEEC
T ss_pred CCCCCCCCcC---hhhcCCCCEEEeeCCCCCChhHH-HHHHHHhhhccccccc--cCCcchhccCCccccC
Confidence 9999998763 66788999999999999864321 2244455555666665 5654333334444443
No 290
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=1.2e-34 Score=309.86 Aligned_cols=287 Identities=24% Similarity=0.282 Sum_probs=168.0
Q ss_pred CCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCC-CCCCCCCCcEEEccCCcCcccCchhhcccCCcceeccc
Q 047901 51 KLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFP-PICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLD 129 (786)
Q Consensus 51 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 129 (786)
+++.+++++|.++ .+|..+ .++|+.|+|++|+++++++ .|.++++|++|+|++|+|+++.|..|.++++|++|+|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEI--SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCC--CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCC--CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 5677777777766 344433 2466666666666665544 36666666666666666666666666666666666666
Q ss_pred cccccccCChhhhccCccceeecccccccCCCCCcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCcccc--c
Q 047901 130 TNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYG--E 207 (786)
Q Consensus 130 ~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~--~ 207 (786)
+|+++ .++..+. ++|+.|++++|+|+.+.+..|..+++|++|++++|.++. +
T Consensus 111 ~n~l~------------------------~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 164 (332)
T 2ft3_A 111 KNHLV------------------------EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGF 164 (332)
T ss_dssp SSCCC------------------------SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGS
T ss_pred CCcCC------------------------ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCC
Confidence 66655 2222222 455566666666665555556666666666666666642 4
Q ss_pred cCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCCCCcccccccccccccccccCCCCccccccC
Q 047901 208 ISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLL 287 (786)
Q Consensus 208 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 287 (786)
.+..|..+ +|+.|++++|++++ +|.. +. ++|+.|++++|+++++.+..|..+
T Consensus 165 ~~~~~~~l-~L~~L~l~~n~l~~-l~~~------------------------~~--~~L~~L~l~~n~i~~~~~~~l~~l 216 (332)
T 2ft3_A 165 EPGAFDGL-KLNYLRISEAKLTG-IPKD------------------------LP--ETLNELHLDHNKIQAIELEDLLRY 216 (332)
T ss_dssp CTTSSCSC-CCSCCBCCSSBCSS-CCSS------------------------SC--SSCSCCBCCSSCCCCCCTTSSTTC
T ss_pred CcccccCC-ccCEEECcCCCCCc-cCcc------------------------cc--CCCCEEECCCCcCCccCHHHhcCC
Confidence 44444444 55555555555543 2222 21 345555555555555555555555
Q ss_pred CcCceeccccccccccchhhhhcccCCcEEEecccccCCCcchHHhhhcCcCeeeccCCccCCCCCccccc------ccc
Q 047901 288 TELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQEIPEDLALLAHLSELDLSHNLFKGSIPSRICN------LES 361 (786)
Q Consensus 288 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~------l~~ 361 (786)
++|+.|++++|+++.+.+..|..+++|++|+|++|+++ .+|..+..+++|+.|++++|+|++..+..|.. ..+
T Consensus 217 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~ 295 (332)
T 2ft3_A 217 SKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAY 295 (332)
T ss_dssp TTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCC
T ss_pred CCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHcccccccccccc
Confidence 55555666666555555555566666666666666665 44555666666777777777666555555544 255
Q ss_pred cceecccccccc--ccCCcccccCCCceEEeccCCc
Q 047901 362 LEKLNLSHNNIS--GQIPACFIGMSGLLSIDISYNE 395 (786)
Q Consensus 362 L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~l~~N~ 395 (786)
|+.|++++|++. ++.|..|..+++|+.+++++|.
T Consensus 296 l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 296 YNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp BSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 777777777776 5666777777777777777764
No 291
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.1e-35 Score=345.78 Aligned_cols=233 Identities=23% Similarity=0.319 Sum_probs=188.0
Q ss_pred ccCccceeeccccCceEEEEEcC--CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEecCCe---
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKLP--SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRH--- 580 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~--- 580 (786)
++|++.+.||+|+||+||+|... +++.||||++... ........+.+|++++++++||||+++++++...+.
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~---~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 156 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS---GDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGD 156 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS---CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSC
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc---CCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCC
Confidence 57999999999999999999864 5889999998642 233456688999999999999999999999987655
Q ss_pred --eeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEecccc
Q 047901 581 --SFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGT 658 (786)
Q Consensus 581 --~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~ 658 (786)
.|+||||+++++|.+++.. .+++..+..++.|++.||.|||++ +|+||||||+|||++.+ .+||+|||+
T Consensus 157 ~~~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~ 227 (681)
T 2pzi_A 157 PVGYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGA 227 (681)
T ss_dssp EEEEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTT
T ss_pred ceeEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEeccc
Confidence 6999999999999987643 689999999999999999999999 99999999999999975 999999999
Q ss_pred ceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCCccccccCCCcchhhh
Q 047901 659 AKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIE 738 (786)
Q Consensus 659 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~ 738 (786)
++..... ....||+.|+|| |...+. ++.++|||||||++|||++|..||.....
T Consensus 228 a~~~~~~----~~~~gt~~y~aP----------E~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~----------- 281 (681)
T 2pzi_A 228 VSRINSF----GYLYGTPGFQAP----------EIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYV----------- 281 (681)
T ss_dssp CEETTCC----SCCCCCTTTSCT----------THHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEEC-----------
T ss_pred chhcccC----CccCCCccccCH----------HHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccc-----------
Confidence 9877543 345799999999 455443 48899999999999999999998663211
Q ss_pred hhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 047901 739 FNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTVC 783 (786)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev~ 783 (786)
..+. ...........+.+++.+||++||++||+..+.+
T Consensus 282 ------~~~~-~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l 319 (681)
T 2pzi_A 282 ------DGLP-EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEM 319 (681)
T ss_dssp ------SSCC-TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHH
T ss_pred ------cccc-ccccccccCHHHHHHHhhhccCChhhCCCHHHHH
Confidence 0011 0111222345688999999999999999655443
No 292
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=5.5e-34 Score=304.59 Aligned_cols=291 Identities=19% Similarity=0.159 Sum_probs=190.7
Q ss_pred CCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCC-CCCCCCCCcEEEc
Q 047901 26 PHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFP-PICNLSNLKYISL 104 (786)
Q Consensus 26 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L 104 (786)
.+++.++++++.++.+ |..+. ++|++|+|++|+|+++.+..|..+++|++|+|++|+++++.+ .+..+++|++|+|
T Consensus 31 c~l~~l~~~~~~l~~l-p~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 31 CHLRVVQCSDLGLEKV-PKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp EETTEEECTTSCCCSC-CCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCCeEEEecCCCcccc-CccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 3567777777766533 33332 466677777777766666666677777777777777666533 4666667777777
Q ss_pred cCCcCcccCchhhcccCCcceeccccccccccCChhhhccCccceeecccccccCCCCCcCCCCCCcEEEccCccccccc
Q 047901 105 HNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNI 184 (786)
Q Consensus 105 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~ 184 (786)
++|+++.++...+ ++|++|++++|++++..+..+..+++|+.|++++|.+.. .++.
T Consensus 108 s~n~l~~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~---------------------~~~~ 163 (330)
T 1xku_A 108 SKNQLKELPEKMP---KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKS---------------------SGIE 163 (330)
T ss_dssp CSSCCSBCCSSCC---TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCG---------------------GGBC
T ss_pred CCCcCCccChhhc---ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCc---------------------cCcC
Confidence 7776664433332 466666666666665555555555555555554444431 1244
Q ss_pred CcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCCCCccccc
Q 047901 185 SEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLI 264 (786)
Q Consensus 185 ~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~ 264 (786)
+..|..+++|++|++++|+++.+....+ ++|++|++++|++++..|..|..+++|+.|+|++|.+++..+..|..++
T Consensus 164 ~~~~~~l~~L~~L~l~~n~l~~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 240 (330)
T 1xku_A 164 NGAFQGMKKLSYIRIADTNITTIPQGLP---PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTP 240 (330)
T ss_dssp TTGGGGCTTCCEEECCSSCCCSCCSSCC---TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGST
T ss_pred hhhccCCCCcCEEECCCCccccCCcccc---ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCC
Confidence 5566666677777777776665433322 5677777777777766666777777777777777777766666777777
Q ss_pred ccccccccccccCCCCccccccCCcCceeccccccccccchhhhhc------ccCCcEEEecccccCC--CcchHHhhhc
Q 047901 265 SLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSILEALGF------MFKLFYLNFSHNQFSQ--EIPEDLALLA 336 (786)
Q Consensus 265 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~------l~~L~~L~L~~N~l~~--~~~~~~~~l~ 336 (786)
+|+.|+|++|+++ ..|..+..+++|+.|++++|+++.++...|.. ...|+.|++++|.+.. +.|..|..+.
T Consensus 241 ~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~ 319 (330)
T 1xku_A 241 HLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVY 319 (330)
T ss_dssp TCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCC
T ss_pred CCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCcccccccc
Confidence 7777777777776 44556777777777777777777777766654 3678999999999964 6778999999
Q ss_pred CcCeeeccCCc
Q 047901 337 HLSELDLSHNL 347 (786)
Q Consensus 337 ~L~~L~L~~N~ 347 (786)
+++.++|++|+
T Consensus 320 ~l~~l~L~~N~ 330 (330)
T 1xku_A 320 VRAAVQLGNYK 330 (330)
T ss_dssp CGGGEEC----
T ss_pred ceeEEEecccC
Confidence 99999999985
No 293
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=4.1e-35 Score=322.56 Aligned_cols=245 Identities=14% Similarity=0.128 Sum_probs=181.2
Q ss_pred hccCccceeeccccCceEEEEEc-CCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCC-Cccccee----------
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKL-PSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH-RNIVKFY---------- 572 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-pniv~l~---------- 572 (786)
...|...+.||+|+||+||+|++ .+++.||||++..... ......+.+.+|+.+++.++| +|.....
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~-~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~ 155 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTER-PPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 155 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC-----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCC-ccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence 34578889999999999999984 5789999999874322 222345679999999999987 3222111
Q ss_pred -----------eEEec-----CCeeeEEEeccCCCCHHHHhhc----CCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC
Q 047901 573 -----------GFCSH-----VRHSFVVYEYINRGSLATVLSN----NFASEDFDWRKRMNVITGVADALSYMHHDCFPP 632 (786)
Q Consensus 573 -----------~~~~~-----~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ 632 (786)
.++.. ....+++|+++ +++|.++++. ......+++..+..++.|++.||+|||++ +
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ 231 (413)
T 3dzo_A 156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---G 231 (413)
T ss_dssp EEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred hcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---C
Confidence 11111 22356777765 5799998852 11245678889999999999999999999 9
Q ss_pred eEEcCCCCCceeeCCCCcEEEeccccceecCCCCCcceeeccCccccCCCCCCCCchHHHHh----------hhcCcCcc
Q 047901 633 IVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELA----------YTMKITEK 702 (786)
Q Consensus 633 ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~----------~~~~~~~~ 702 (786)
|+||||||+|||++.++.+||+|||+++..... ....+| +.|+|| |+. ....++.+
T Consensus 232 iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aP----------E~~~~~~~~~~~~~~~~~~~~ 297 (413)
T 3dzo_A 232 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPP----------ETTAERMLPFGQHHPTLMTFA 297 (413)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCH----------HHHHHHTSTTGGGCCEEECHH
T ss_pred cccCCcccceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCc----------hhhhccccccccccCcCCCch
Confidence 999999999999999999999999999876432 344577 999999 555 44568889
Q ss_pred cchHHHHHHHHHHHhCCCCCCccccccCCCcchhhhhhhhccCCCCCCChhHHHHHHHHHHHHHhccCCCCCCCCCHHHH
Q 047901 703 CDVYSFGVLALEVIKGKHPGDFLSLFSSSSSSINIEFNAMLDHRLPHPSLDVQEKLISIMEVALLCLDGCPNSRPTMQTV 782 (786)
Q Consensus 703 sDvwslGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~ev 782 (786)
+|||||||++|||++|+.||....... ....+.......+ ..+.+++..||+.||++|||+.++
T Consensus 298 ~DvwSlGvil~elltg~~Pf~~~~~~~--------~~~~~~~~~~~~~--------~~~~~li~~~l~~dP~~Rpt~~~~ 361 (413)
T 3dzo_A 298 FDTWTLGLAIYWIWCADLPNTDDAALG--------GSEWIFRSCKNIP--------QPVRALLEGFLRYPKEDRLLPLQA 361 (413)
T ss_dssp HHHHHHHHHHHHHHHSSCCCCTTGGGS--------CSGGGGSSCCCCC--------HHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred hhHHHHHHHHHHHHHCCCCCCCcchhh--------hHHHHHhhcccCC--------HHHHHHHHHHccCChhhCcCHHHH
Confidence 999999999999999999987543211 1111222111111 348899999999999999999888
Q ss_pred HH
Q 047901 783 CQ 784 (786)
Q Consensus 783 ~~ 784 (786)
++
T Consensus 362 l~ 363 (413)
T 3dzo_A 362 ME 363 (413)
T ss_dssp TT
T ss_pred Hh
Confidence 64
No 294
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=1.8e-35 Score=316.97 Aligned_cols=243 Identities=15% Similarity=0.143 Sum_probs=185.7
Q ss_pred hccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCC----CchhhHHHHHHHHHHHhhcC---------CCcccce
Q 047901 505 TKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPN----DQMSDQKEFLNEIKALTKIR---------HRNIVKF 571 (786)
Q Consensus 505 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~~e~~~l~~l~---------hpniv~l 571 (786)
.++|++.+.||+|+||+||+|+. +++.||||++...... ......+.+.+|+.+++.++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35799999999999999999988 6899999999764321 12234577889999998886 6666665
Q ss_pred eeE-----------------Eec-------------CCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHH
Q 047901 572 YGF-----------------CSH-------------VRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADA 621 (786)
Q Consensus 572 ~~~-----------------~~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~ 621 (786)
.++ +.. .+..|+||||+++|++.+.+.+ ..+++..+..++.|++.|
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTAS 173 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHH
Confidence 554 332 6789999999999987777643 458999999999999999
Q ss_pred HHHHh-hCCCCCeEEcCCCCCceeeCCCC--------------------cEEEeccccceecCCCCCcceeeccCccccC
Q 047901 622 LSYMH-HDCFPPIVHRDISSNNVLLDLEY--------------------EARVSDFGTAKLLKPNSSNWTELVGTFGYVA 680 (786)
Q Consensus 622 l~~LH-~~~~~~ivHrdlk~~Nill~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~a 680 (786)
|+||| +. +|+||||||+|||++.++ .+||+|||+|+..... ...||+.|+|
T Consensus 174 L~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-----~~~gt~~y~a 245 (336)
T 2vuw_A 174 LAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-----IVVFCDVSMD 245 (336)
T ss_dssp HHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----EEECCCCTTC
T ss_pred HHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----cEEEeecccC
Confidence 99999 88 999999999999999887 9999999999877532 3589999999
Q ss_pred CCCCCCCchHHHHhhhcCcCcccchHHHHHH-HHHHHhCCCCCCccccccCCCcchhhhhhhhc---cCCCCCCChhHHH
Q 047901 681 PAHGNIGLHLAELAYTMKITEKCDVYSFGVL-ALEVIKGKHPGDFLSLFSSSSSSINIEFNAML---DHRLPHPSLDVQE 756 (786)
Q Consensus 681 PE~~~~~~~~~e~~~~~~~~~~sDvwslGvi-l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 756 (786)
| |++.+.. +.++||||+|++ .+++++|..||..... .......+. ......+......
T Consensus 246 P----------E~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (336)
T 2vuw_A 246 E----------DLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLW-------LHYLTDKMLKQMTFKTKCNTPAMKQ 307 (336)
T ss_dssp S----------GGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHH-------HHHHHHHHHHTCCCSSCCCSHHHHH
T ss_pred h----------hhhcCCC-ccceehhhhhCCCCcccccccCCCcchhh-------hhHHHHhhhhhhccCcccchhhhhh
Confidence 9 5555444 789999998776 7888899999753110 000111111 1122223334556
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHH
Q 047901 757 KLISIMEVALLCLDGCPNSRPTMQTVC 783 (786)
Q Consensus 757 ~~~~l~~li~~cl~~~p~~RPt~~ev~ 783 (786)
.+..+.+++.+||.+| |++|++
T Consensus 308 ~s~~~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 308 IKRKIQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred cCHHHHHHHHHHhccC-----CHHHHH
Confidence 6778999999999865 999998
No 295
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=2e-33 Score=297.37 Aligned_cols=247 Identities=30% Similarity=0.464 Sum_probs=184.0
Q ss_pred CCCcEEECCCCCccc--cCchhccCCCCCCEEeCcC-CcccccCCccccCCCCCCEEeCCCccCcccCC-CCCCCCCCcE
Q 047901 26 PHLAYLDLSINGFFG--TLPPQVRNLSKLKYLDLSE-NELSGKIPPEIGLLTHLFSLDLSLNQFSGTFP-PICNLSNLKY 101 (786)
Q Consensus 26 ~~L~~L~L~~n~i~~--~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~ 101 (786)
.+++.|+|++|++.+ ..|..|.++++|++|+|++ |++.+..|..|..+++|++|+|++|++++..+ .+..+++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 578888888888887 7888888888899999985 88888888888888889999998888885444 5888888999
Q ss_pred EEccCCcCcccCchhhcccCCcceeccccccccccCChhhhccC-ccceeecccccccCCCC-CcCCCCCCcEEEccCcc
Q 047901 102 ISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSG-LLEILTVNDNHFLGSIP-NLRNCRSLVRAHLGRNN 179 (786)
Q Consensus 102 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~-~L~~L~l~~N~l~~~~~-~l~~l~~L~~L~L~~N~ 179 (786)
|+|++|++++..|..|.++++|++|+|++|++++..|..+..+. .|+.|++++|.+++..+ .+..++ |+.|++++|+
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 99999988888888888889999999999988888888777776 67777777776664333 345454 6666666666
Q ss_pred cccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCCCC
Q 047901 180 LTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPME 259 (786)
Q Consensus 180 l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~ 259 (786)
+++..+..|..+++|++|+|++|++++..+. +..+++|++|+|++|+|++..|..|..+++|+.|+|++|++++.+|..
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 6666666666777777777777776655444 556666666666666666666666666666666666666666665554
Q ss_pred cccccccccccccccc
Q 047901 260 LGRLISLNKLILRGNQ 275 (786)
Q Consensus 260 ~~~l~~L~~L~L~~N~ 275 (786)
..+++|+.|++++|.
T Consensus 288 -~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 288 -GNLQRFDVSAYANNK 302 (313)
T ss_dssp -TTGGGSCGGGTCSSS
T ss_pred -ccccccChHHhcCCC
Confidence 556666666666665
No 296
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=6.1e-37 Score=343.60 Aligned_cols=155 Identities=17% Similarity=0.169 Sum_probs=72.9
Q ss_pred eEEEEcCCCCCcccCCcCccCCCCCCcEEECCCCCccc----cCchhccCCCCCCEEeCcCCcccccCCccc-cCCC---
Q 047901 3 VNSINLTSTGLKGTLQEFSFSSFPHLAYLDLSINGFFG----TLPPQVRNLSKLKYLDLSENELSGKIPPEI-GLLT--- 74 (786)
Q Consensus 3 ~~~l~l~~~~l~~~l~~~~f~~l~~L~~L~L~~n~i~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~--- 74 (786)
++.|+|+++++...-....|..+++|++|+|++|+++. ..+..+..+++|++|+|++|+|+...+..+ ..++
T Consensus 5 l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~ 84 (461)
T 1z7x_W 5 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPS 84 (461)
T ss_dssp EEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTT
T ss_pred ceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCC
Confidence 45555555555432222224555555555555555542 224445555555555555555553322222 2233
Q ss_pred -CCCEEeCCCccCcc-----cCCCCCCCCCCcEEEccCCcCcccCchhhc-----ccCCcceeccccccccccC----Ch
Q 047901 75 -HLFSLDLSLNQFSG-----TFPPICNLSNLKYISLHNNKLSGSIPEEIG-----NLMKLSYLMLDTNQFTGQL----PR 139 (786)
Q Consensus 75 -~L~~L~Ls~N~l~~-----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-----~l~~L~~L~L~~N~l~~~~----~~ 139 (786)
+|++|+|++|+++. ++..+..+++|++|+|++|++++..+..+. ..++|++|+|++|++++.. +.
T Consensus 85 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 164 (461)
T 1z7x_W 85 CKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLAS 164 (461)
T ss_dssp CCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred CceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHH
Confidence 45555555555542 122344555555555555555433232222 1334555555555555322 23
Q ss_pred hhhccCccceeecccccc
Q 047901 140 NICRSGLLEILTVNDNHF 157 (786)
Q Consensus 140 ~~~~~~~L~~L~l~~N~l 157 (786)
.+..+++|+.|++++|.+
T Consensus 165 ~l~~~~~L~~L~L~~n~i 182 (461)
T 1z7x_W 165 VLRAKPDFKELTVSNNDI 182 (461)
T ss_dssp HHHHCTTCCEEECCSSBC
T ss_pred HHhhCCCCCEEECcCCCc
Confidence 333344444444444444
No 297
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=2.4e-36 Score=338.80 Aligned_cols=374 Identities=19% Similarity=0.140 Sum_probs=296.7
Q ss_pred CCCCcEEECCCCCccccCchh-ccCCCCCCEEeCcCCccccc----CCccccCCCCCCEEeCCCccCcccCC-C-CCCCC
Q 047901 25 FPHLAYLDLSINGFFGTLPPQ-VRNLSKLKYLDLSENELSGK----IPPEIGLLTHLFSLDLSLNQFSGTFP-P-ICNLS 97 (786)
Q Consensus 25 l~~L~~L~L~~n~i~~~~~~~-~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~-~-~~~l~ 97 (786)
.++|++|||++|+++...... |..+++|++|+|++|+++.. .+..+..+++|++|+|++|+++.... . +..++
T Consensus 2 ~~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~ 81 (461)
T 1z7x_W 2 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQ 81 (461)
T ss_dssp CEEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTC
T ss_pred CccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHh
Confidence 367999999999997665444 88999999999999999853 46678889999999999999975322 1 22334
Q ss_pred ----CCcEEEccCCcCcc----cCchhhcccCCcceeccccccccccCChhhhc-----cCccceeecccccccCCC---
Q 047901 98 ----NLKYISLHNNKLSG----SIPEEIGNLMKLSYLMLDTNQFTGQLPRNICR-----SGLLEILTVNDNHFLGSI--- 161 (786)
Q Consensus 98 ----~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-----~~~L~~L~l~~N~l~~~~--- 161 (786)
+|++|+|++|+|+. ..+..|..+++|++|+|++|+++...+..++. .++|+.|++++|.++...
T Consensus 82 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~ 161 (461)
T 1z7x_W 82 TPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEP 161 (461)
T ss_dssp STTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHH
T ss_pred hCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHH
Confidence 79999999999985 45888999999999999999998665555544 457999999999998632
Q ss_pred --CCcCCCCCCcEEEccCcccccccCcccC-----CCCCCCEEeccCCccccc----cCcCccCCCCccEEEccCcccCC
Q 047901 162 --PNLRNCRSLVRAHLGRNNLTGNISEDFG-----IYPNLKFLDLSHNNFYGE----ISSNWGKCHRLGTLIVSGNNITG 230 (786)
Q Consensus 162 --~~l~~l~~L~~L~L~~N~l~~~~~~~f~-----~l~~L~~L~L~~N~i~~~----~~~~~~~l~~L~~L~L~~N~l~~ 230 (786)
..+..+++|+.|++++|.++......+. ..++|++|+|++|+++.. .+..+..+++|++|+|++|.+++
T Consensus 162 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~ 241 (461)
T 1z7x_W 162 LASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD 241 (461)
T ss_dssp HHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHH
T ss_pred HHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCCh
Confidence 2356789999999999999876554443 367999999999999874 36667789999999999999875
Q ss_pred CC-----CccccCCccccEEEeeccccccc----CCCCcccccccccccccccccCCCCcccccc-----CCcCceeccc
Q 047901 231 RI-----PPEIGNSSQLHVLDLSSNHIAGE----IPMELGRLISLNKLILRGNQLSGHLPRALGL-----LTELEYFDLS 296 (786)
Q Consensus 231 ~~-----~~~~~~l~~L~~L~Ls~N~i~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-----l~~L~~L~L~ 296 (786)
.. +..+..+++|+.|+|++|.++.. ++..+..+++|+.|+|++|.++...+..+.. .++|+.|+++
T Consensus 242 ~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~ 321 (461)
T 1z7x_W 242 VGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVK 321 (461)
T ss_dssp HHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECT
T ss_pred HHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcC
Confidence 32 23344689999999999999864 5667778999999999999997544444432 3799999999
Q ss_pred cccccccc----hhhhhcccCCcEEEecccccCCCcchHHhh-----hcCcCeeeccCCccCC----CCCcccccccccc
Q 047901 297 SNRLNNSI----LEALGFMFKLFYLNFSHNQFSQEIPEDLAL-----LAHLSELDLSHNLFKG----SIPSRICNLESLE 363 (786)
Q Consensus 297 ~N~l~~~~----~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-----l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~ 363 (786)
+|.++... +..+..+++|++|+|++|.++...+..+.. .++|+.|+|++|.+++ .+|..+..+++|+
T Consensus 322 ~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~ 401 (461)
T 1z7x_W 322 SCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLR 401 (461)
T ss_dssp TSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCC
T ss_pred CCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCcc
Confidence 99998764 455667899999999999998765655554 5699999999999985 6788888899999
Q ss_pred eeccccccccccCCcccc-----cCCCceEEeccCCcccc
Q 047901 364 KLNLSHNNISGQIPACFI-----GMSGLLSIDISYNELRG 398 (786)
Q Consensus 364 ~L~L~~N~l~~~~p~~~~-----~l~~L~~L~l~~N~l~~ 398 (786)
.|++++|++++.-...+. ...+|+.|++.++....
T Consensus 402 ~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~~ 441 (461)
T 1z7x_W 402 ELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSE 441 (461)
T ss_dssp EEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCH
T ss_pred EEECCCCCCCHHHHHHHHHHhccCCcchhheeecccccCH
Confidence 999999999864222221 23467777777776653
No 298
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=3.6e-33 Score=295.37 Aligned_cols=253 Identities=24% Similarity=0.394 Sum_probs=184.6
Q ss_pred CCCcEEEccCccccc--ccCcccCCCCCCCEEeccC-CccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccE
Q 047901 168 RSLVRAHLGRNNLTG--NISEDFGIYPNLKFLDLSH-NNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHV 244 (786)
Q Consensus 168 ~~L~~L~L~~N~l~~--~~~~~f~~l~~L~~L~L~~-N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 244 (786)
.+++.|+|++|++++ ..+..|..+++|++|+|++ |.+.+..|..|..+++|++|+|++|++++..|..|..+++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 456667777777766 5666777777777777774 7777677777777777777777777777667777777777777
Q ss_pred EEeecccccccCCCCcccccccccccccccccCCCCccccccCC-cCceeccccccccccchhhhhcccCCcEEEecccc
Q 047901 245 LDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLT-ELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQ 323 (786)
Q Consensus 245 L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 323 (786)
|+|++|.+++..|..|..+++|++|+|++|++++..|..+..++ +|+.|++++|++++..+..|..+. |++|++++|.
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 77777777777777777777777777777777766677777776 777777777777766667777665 7777777777
Q ss_pred cCCCcchHHhhhcCcCeeeccCCccCCCCCcccccccccceeccccccccccCCcccccCCCceEEeccCCcccccCCCC
Q 047901 324 FSQEIPEDLALLAHLSELDLSHNLFKGSIPSRICNLESLEKLNLSHNNISGQIPACFIGMSGLLSIDISYNELRGPIPNS 403 (786)
Q Consensus 324 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 403 (786)
+++..|..|..+++|+.|+|++|++++.+|. +..+++|++|++++|+|++..|..|..+++|+.|++++|++++.+|..
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 7777777777777777777777777755444 667777777777777777777777777777777777777777777776
Q ss_pred CccccCCCccccCCCCCCCCC
Q 047901 404 TVFRNAPRESFLGNNFSTFYG 424 (786)
Q Consensus 404 ~~~~~~~~~~~~~n~~~~~~~ 424 (786)
..+.......+.+|++ .||
T Consensus 288 ~~l~~L~~l~l~~N~~--lc~ 306 (313)
T 1ogq_A 288 GNLQRFDVSAYANNKC--LCG 306 (313)
T ss_dssp TTGGGSCGGGTCSSSE--EES
T ss_pred ccccccChHHhcCCCC--ccC
Confidence 6666666677777775 665
No 299
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=1.9e-31 Score=281.73 Aligned_cols=278 Identities=22% Similarity=0.229 Sum_probs=149.3
Q ss_pred CEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCCC-CCCCCCCcEEEccCCcCcccC--chhhcccCCcceeccc
Q 047901 53 KYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFPP-ICNLSNLKYISLHNNKLSGSI--PEEIGNLMKLSYLMLD 129 (786)
Q Consensus 53 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~ 129 (786)
+.++++++.++. .|..+ .++|++|+|++|+++.+++. |..+++|++|+|++|+++.+. +..+.++++|++|+|+
T Consensus 10 ~~l~c~~~~l~~-ip~~~--~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCSS-CCSCC--CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCccc-CCCCC--CCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 456667776663 34333 24666666666666655554 556666666666666665332 4455556666666666
Q ss_pred cccccccCChhhhccCccceeecccccccCCCCCcCCCCCCcEEEccCcccccccC-cccCCCCCCCEEeccCCcccccc
Q 047901 130 TNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNIS-EDFGIYPNLKFLDLSHNNFYGEI 208 (786)
Q Consensus 130 ~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~~f~~l~~L~~L~L~~N~i~~~~ 208 (786)
+|.++. +|..+ .++++|+.|++++|+++++.+ ..|..+++|++|++++|++.++.
T Consensus 87 ~n~i~~-l~~~~-----------------------~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 142 (306)
T 2z66_A 87 FNGVIT-MSSNF-----------------------LGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAF 142 (306)
T ss_dssp SCSEEE-EEEEE-----------------------ETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECS
T ss_pred CCcccc-Chhhc-----------------------CCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccc
Confidence 666552 23333 334444444455555444433 34555555666666666555555
Q ss_pred CcCccCCCCccEEEccCcccCC-CCCccccCCccccEEEeecccccccCCCCcccccccccccccccccCCCCccccccC
Q 047901 209 SSNWGKCHRLGTLIVSGNNITG-RIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLL 287 (786)
Q Consensus 209 ~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 287 (786)
+..|..+++|++|+|++|.+++ ..|..+..+++|+.|+|++|.+++..|..|..+++|+.|+|++|+++++.+..|..+
T Consensus 143 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 222 (306)
T 2z66_A 143 NGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCL 222 (306)
T ss_dssp TTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTC
T ss_pred hhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCc
Confidence 5555555555555555555554 345555555556666666665555555555555555555555555555555555555
Q ss_pred CcCceeccccccccccchhhhhccc-CCcEEEecccccCCCcc--hHHhhhcCcCeeeccCCccCCCCCcccc
Q 047901 288 TELEYFDLSSNRLNNSILEALGFMF-KLFYLNFSHNQFSQEIP--EDLALLAHLSELDLSHNLFKGSIPSRIC 357 (786)
Q Consensus 288 ~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~--~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 357 (786)
++|+.|++++|++.+..+..+..++ +|++|+|++|.+++..+ .....+...+.+.+..+.+....|..+.
T Consensus 223 ~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~~ 295 (306)
T 2z66_A 223 NSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQ 295 (306)
T ss_dssp TTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGGGT
T ss_pred ccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchhhC
Confidence 5555555555555555555555442 55555555555543321 1122333344444444444444444443
No 300
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=2.4e-31 Score=280.98 Aligned_cols=246 Identities=24% Similarity=0.203 Sum_probs=168.6
Q ss_pred EEEEcCCCCCcccCCcCccCCCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccC--CccccCCCCCCEEeC
Q 047901 4 NSINLTSTGLKGTLQEFSFSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKI--PPEIGLLTHLFSLDL 81 (786)
Q Consensus 4 ~~l~l~~~~l~~~l~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L 81 (786)
+.++.+++++. .+|... .++|++|+|++|+++.+.+..|.++++|++|+|++|+|+.+. +..+..+++|++|+|
T Consensus 10 ~~l~c~~~~l~-~ip~~~---~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 85 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGI---PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL 85 (306)
T ss_dssp TEEECCSSCCS-SCCSCC---CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEEC
T ss_pred CEEEcCCCCcc-cCCCCC---CCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEEC
Confidence 35777777776 566532 267888888888887777777888888888888888887432 566777888888888
Q ss_pred CCccCcccCCCCCCCCCCcEEEccCCcCcccCc-hhhcccCCcceeccccccccccCChhhhccCccceeecccccccC-
Q 047901 82 SLNQFSGTFPPICNLSNLKYISLHNNKLSGSIP-EEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLG- 159 (786)
Q Consensus 82 s~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~- 159 (786)
++|++++++..+..+++|++|+|++|+++++.+ ..|.++++|++|++++|++++..+..+..+++|+.|++++|.+.+
T Consensus 86 s~n~i~~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 165 (306)
T 2z66_A 86 SFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 165 (306)
T ss_dssp CSCSEEEEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGG
T ss_pred CCCccccChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccc
Confidence 888888776667788888888888888887665 678888888888888888887777766666666666666666654
Q ss_pred -CCCCcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccC
Q 047901 160 -SIPNLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGN 238 (786)
Q Consensus 160 -~~~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 238 (786)
.+..+..+++|+.|++++|+|+++.+..|..+++|++|+|++|+++++.+..|..+++|+.|+|++|++++..|..+..
T Consensus 166 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 245 (306)
T 2z66_A 166 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQH 245 (306)
T ss_dssp EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCC
T ss_pred cchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHh
Confidence 2334555555666666666555555555555555666666655555555555555555555555555555555555555
Q ss_pred Cc-cccEEEeeccccc
Q 047901 239 SS-QLHVLDLSSNHIA 253 (786)
Q Consensus 239 l~-~L~~L~Ls~N~i~ 253 (786)
++ +|+.|+|++|.+.
T Consensus 246 ~~~~L~~L~L~~N~~~ 261 (306)
T 2z66_A 246 FPSSLAFLNLTQNDFA 261 (306)
T ss_dssp CCTTCCEEECTTCCEE
T ss_pred hhccCCEEEccCCCee
Confidence 53 5555555555554
No 301
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=2.5e-31 Score=286.80 Aligned_cols=189 Identities=20% Similarity=0.218 Sum_probs=84.4
Q ss_pred cCCCCCCCEEeccCCccccccC-cCccCCCCccEEEccCc-ccCCCCCccccCCccccEEEeecccccccCCCCcccccc
Q 047901 188 FGIYPNLKFLDLSHNNFYGEIS-SNWGKCHRLGTLIVSGN-NITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLIS 265 (786)
Q Consensus 188 f~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~ 265 (786)
|..+++|++|+|++|+++.+.+ ..|..+++|++|++++| .+..+.+..|.++++|+.|++++|.+++..|..|..+++
T Consensus 120 ~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~ 199 (353)
T 2z80_A 120 FKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQN 199 (353)
T ss_dssp HTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSE
T ss_pred hCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhcccc
Confidence 3334444444444444443333 23444444444444444 233333334444444444444444444444444444444
Q ss_pred cccccccccccCCCCccccccCCcCceeccccccccccchhhhh---cccCCcEEEecccccCC----CcchHHhhhcCc
Q 047901 266 LNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSILEALG---FMFKLFYLNFSHNQFSQ----EIPEDLALLAHL 338 (786)
Q Consensus 266 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~---~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L 338 (786)
|+.|++++|++..+....+..+++|+.|++++|++++.....+. ....++.++|++|.+++ .+|..+..+++|
T Consensus 200 L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L 279 (353)
T 2z80_A 200 VSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGL 279 (353)
T ss_dssp EEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTC
T ss_pred CCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCC
Confidence 44444444444333222333344444444444444433322211 23344555555555443 234455556666
Q ss_pred CeeeccCCccCCCCCcccccccccceeccccccccccC
Q 047901 339 SELDLSHNLFKGSIPSRICNLESLEKLNLSHNNISGQI 376 (786)
Q Consensus 339 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 376 (786)
+.|+|++|+++...+..|.++++|+.|++++|++.+..
T Consensus 280 ~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~ 317 (353)
T 2z80_A 280 LELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 317 (353)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred CEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcC
Confidence 66666666666333333455666666666666655443
No 302
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=4.1e-30 Score=286.83 Aligned_cols=245 Identities=20% Similarity=0.161 Sum_probs=161.7
Q ss_pred CcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCC-CCCCCCCCcEEEccC
Q 047901 28 LAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFP-PICNLSNLKYISLHN 106 (786)
Q Consensus 28 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~ 106 (786)
...++.+++.++.+ |..+. ++|++|+|++|+|+++.+..|..+++|++|+|++|+|+++++ .|.++++|++|+|++
T Consensus 56 ~~~v~c~~~~l~~i-P~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 56 FSKVVCTRRGLSEV-PQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp SCEEECCSSCCSSC-CSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CcEEEECCCCcCcc-CCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 45566666665433 32222 456666666666665556666666666666666666665543 355566666666666
Q ss_pred CcCcccCchhhcccCCcceeccccccccccCChhhhccCccceeecccc-cccCCCC-CcCCCCCCcEEEccCccccccc
Q 047901 107 NKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDN-HFLGSIP-NLRNCRSLVRAHLGRNNLTGNI 184 (786)
Q Consensus 107 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N-~l~~~~~-~l~~l~~L~~L~L~~N~l~~~~ 184 (786)
|+|+.+++..|.++++|++|+|++|+++...+..|..+++|+.|++++| .+..+.+ .+.++++|+.|+|++|+|+++.
T Consensus 133 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~ 212 (452)
T 3zyi_A 133 NWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMP 212 (452)
T ss_dssp SCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCC
T ss_pred CcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccccc
Confidence 6666555555666666666666666666555555666666666666653 3333333 2566777777777777777652
Q ss_pred CcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCCCCccccc
Q 047901 185 SEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLI 264 (786)
Q Consensus 185 ~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~ 264 (786)
.+..+++|++|+|++|+|+++.+..|.++++|+.|+|++|+++++.+..|.++++|+.|+|++|+|++..+..|..++
T Consensus 213 --~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 290 (452)
T 3zyi_A 213 --NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLR 290 (452)
T ss_dssp --CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCT
T ss_pred --cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcccc
Confidence 466777777778877777777777777777788888888877777777777778888888888888777777777788
Q ss_pred ccccccccccccC
Q 047901 265 SLNKLILRGNQLS 277 (786)
Q Consensus 265 ~L~~L~L~~N~l~ 277 (786)
+|+.|+|++|.+.
T Consensus 291 ~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 291 YLVELHLHHNPWN 303 (452)
T ss_dssp TCCEEECCSSCEE
T ss_pred CCCEEEccCCCcC
Confidence 8888888888775
No 303
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=2.7e-31 Score=286.47 Aligned_cols=280 Identities=15% Similarity=0.136 Sum_probs=233.0
Q ss_pred CCCCcEEEccCCcCcccCchhhcccCCcceeccccccccccCChhhhccCccceeecccccccCCCCCcCCCCCCcEEEc
Q 047901 96 LSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSLVRAHL 175 (786)
Q Consensus 96 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L 175 (786)
++.....++++|.++.++.. +. ++|++|++++|++++..+. .+.++++|+.|++
T Consensus 30 C~~~~~c~~~~~~l~~iP~~-~~--~~L~~L~l~~n~i~~~~~~-----------------------~~~~l~~L~~L~L 83 (353)
T 2z80_A 30 CDRNGICKGSSGSLNSIPSG-LT--EAVKSLDLSNNRITYISNS-----------------------DLQRCVNLQALVL 83 (353)
T ss_dssp ECTTSEEECCSTTCSSCCTT-CC--TTCCEEECTTSCCCEECTT-----------------------TTTTCTTCCEEEC
T ss_pred CCCCeEeeCCCCCccccccc-cc--ccCcEEECCCCcCcccCHH-----------------------HhccCCCCCEEEC
Confidence 44555567777777754432 22 3566666666666643332 3566778888888
Q ss_pred cCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCC-ccccCCccccEEEeecc-ccc
Q 047901 176 GRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIP-PEIGNSSQLHVLDLSSN-HIA 253 (786)
Q Consensus 176 ~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N-~i~ 253 (786)
++|+|+++.+..|..+++|++|+|++|+|+++.+..|..+++|++|+|++|+++++.+ ..|..+++|+.|++++| .+.
T Consensus 84 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~ 163 (353)
T 2z80_A 84 TSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFT 163 (353)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCC
T ss_pred CCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCcccc
Confidence 8888888888899999999999999999998888789999999999999999996655 58999999999999999 588
Q ss_pred ccCCCCcccccccccccccccccCCCCccccccCCcCceeccccccccccchhhhhcccCCcEEEecccccCCCcchHHh
Q 047901 254 GEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQEIPEDLA 333 (786)
Q Consensus 254 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 333 (786)
...+..|.++++|+.|++++|++++..|..|..+++|+.|++++|++..++...+..+++|++|++++|.+++..+..+.
T Consensus 164 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~ 243 (353)
T 2z80_A 164 KIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELS 243 (353)
T ss_dssp EECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC---
T ss_pred ccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccc
Confidence 77788999999999999999999999899999999999999999999988888888899999999999999987655443
Q ss_pred ---hhcCcCeeeccCCccCC----CCCcccccccccceeccccccccccCCcccccCCCceEEeccCCcccccCC
Q 047901 334 ---LLAHLSELDLSHNLFKG----SIPSRICNLESLEKLNLSHNNISGQIPACFIGMSGLLSIDISYNELRGPIP 401 (786)
Q Consensus 334 ---~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 401 (786)
....++.++|++|.+++ .+|..+..+++|+.|++++|+|+.+.+..|.++++|+.|++++|++.+..|
T Consensus 244 ~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 244 TGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp ---CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 35678888898888875 367788899999999999999997666667999999999999999988665
No 304
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=5.4e-30 Score=284.86 Aligned_cols=245 Identities=20% Similarity=0.142 Sum_probs=158.2
Q ss_pred CcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCC-CCCCCCCCcEEEccC
Q 047901 28 LAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFP-PICNLSNLKYISLHN 106 (786)
Q Consensus 28 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~ 106 (786)
...++.++++++.+ |..+. ++++.|+|++|+|+.+.+..|..+++|++|+|++|+|+++.+ .|.++++|++|+|++
T Consensus 45 ~~~v~c~~~~l~~i-P~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 45 FSKVICVRKNLREV-PDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp SCEEECCSCCCSSC-CSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCS
T ss_pred CCEEEeCCCCcCcC-CCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCC
Confidence 44555655555433 32222 355666666666665555566666666666666666655443 355566666666666
Q ss_pred CcCcccCchhhcccCCcceeccccccccccCChhhhccCccceeecccc-cccCCCC-CcCCCCCCcEEEccCccccccc
Q 047901 107 NKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDN-HFLGSIP-NLRNCRSLVRAHLGRNNLTGNI 184 (786)
Q Consensus 107 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N-~l~~~~~-~l~~l~~L~~L~L~~N~l~~~~ 184 (786)
|+|+.+.+..|.++++|++|+|++|+++...+..|..+++|+.|++++| .+..+.+ .+.++++|+.|+|++|+|+.++
T Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~ 201 (440)
T 3zyj_A 122 NRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP 201 (440)
T ss_dssp SCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSCC
T ss_pred CcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcccc
Confidence 6666555555666666666666666666555555666666666666653 2333332 3566677777777777776553
Q ss_pred CcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCCCCccccc
Q 047901 185 SEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLI 264 (786)
Q Consensus 185 ~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~ 264 (786)
.+..+++|++|+|++|+|+++.+..|.++++|+.|+|++|+|+++.+..|.++++|+.|+|++|+|++..+..|..++
T Consensus 202 --~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 279 (440)
T 3zyj_A 202 --NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLH 279 (440)
T ss_dssp --CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCT
T ss_pred --ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhcccc
Confidence 466777777777777777777777777777777777777777777777777777788888888877777777777777
Q ss_pred ccccccccccccC
Q 047901 265 SLNKLILRGNQLS 277 (786)
Q Consensus 265 ~L~~L~L~~N~l~ 277 (786)
+|+.|+|++|.+.
T Consensus 280 ~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 280 HLERIHLHHNPWN 292 (440)
T ss_dssp TCCEEECCSSCEE
T ss_pred CCCEEEcCCCCcc
Confidence 8888888888775
No 305
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=3.9e-30 Score=287.06 Aligned_cols=248 Identities=21% Similarity=0.175 Sum_probs=189.7
Q ss_pred cceeecccccccCCCCCcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCc
Q 047901 147 LEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGN 226 (786)
Q Consensus 147 L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N 226 (786)
...++++++.++.++..+. ++++.|+|++|+|+++.+..|..+++|++|+|++|+|+++.+..|.++++|++|+|++|
T Consensus 56 ~~~v~c~~~~l~~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 133 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDN 133 (452)
T ss_dssp SCEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CcEEEECCCCcCccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCC
Confidence 3455666666665555444 56777788888887777777888888888888888888777777888888888888888
Q ss_pred ccCCCCCccccCCccccEEEeecccccccCCCCcccccccccccccc-cccCCCCccccccCCcCceeccccccccccch
Q 047901 227 NITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRG-NQLSGHLPRALGLLTELEYFDLSSNRLNNSIL 305 (786)
Q Consensus 227 ~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 305 (786)
+|+.+.+..|.++++|+.|+|++|+|+.+.+..|.++++|+.|+|++ |.+..+.+..|.++++|+.|+|++|+++.++
T Consensus 134 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~- 212 (452)
T 3zyi_A 134 WLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMP- 212 (452)
T ss_dssp CCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCC-
T ss_pred cCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccccc-
Confidence 88776666777788888888888888777777777888888888877 5555555667777888888888888877653
Q ss_pred hhhhcccCCcEEEecccccCCCcchHHhhhcCcCeeeccCCccCCCCCcccccccccceeccccccccccCCcccccCCC
Q 047901 306 EALGFMFKLFYLNFSHNQFSQEIPEDLALLAHLSELDLSHNLFKGSIPSRICNLESLEKLNLSHNNISGQIPACFIGMSG 385 (786)
Q Consensus 306 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 385 (786)
.+..+++|++|+|++|.+++..|..|..+++|+.|+|++|++++..+..|.++++|+.|+|++|+|++..+..|..+++
T Consensus 213 -~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 291 (452)
T 3zyi_A 213 -NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRY 291 (452)
T ss_dssp -CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTT
T ss_pred -cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccC
Confidence 4667778888888888888777778888888888888888888777777888888888888888888777777777888
Q ss_pred ceEEeccCCcccc
Q 047901 386 LLSIDISYNELRG 398 (786)
Q Consensus 386 L~~L~l~~N~l~~ 398 (786)
|+.|+|++|++.+
T Consensus 292 L~~L~L~~Np~~C 304 (452)
T 3zyi_A 292 LVELHLHHNPWNC 304 (452)
T ss_dssp CCEEECCSSCEEC
T ss_pred CCEEEccCCCcCC
Confidence 8888888887754
No 306
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=3.5e-30 Score=286.40 Aligned_cols=248 Identities=23% Similarity=0.195 Sum_probs=192.3
Q ss_pred cceeecccccccCCCCCcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCc
Q 047901 147 LEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGN 226 (786)
Q Consensus 147 L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N 226 (786)
...++++++.++.++..+. ++++.|+|++|+|+.+.+..|..+++|++|+|++|+|+++.+..|.++++|++|+|++|
T Consensus 45 ~~~v~c~~~~l~~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp SCEEECCSCCCSSCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred CCEEEeCCCCcCcCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 4456666666666655554 56777888888888777777888888888888888888777777888888888888888
Q ss_pred ccCCCCCccccCCccccEEEeecccccccCCCCcccccccccccccc-cccCCCCccccccCCcCceeccccccccccch
Q 047901 227 NITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRG-NQLSGHLPRALGLLTELEYFDLSSNRLNNSIL 305 (786)
Q Consensus 227 ~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 305 (786)
+|+.+.+..|..+++|+.|+|++|.|+.+.+..|.++++|+.|+|++ |.+..+.+..|.++++|+.|+|++|.++.++
T Consensus 123 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~- 201 (440)
T 3zyj_A 123 RLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP- 201 (440)
T ss_dssp CCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSCC-
T ss_pred cCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcccc-
Confidence 88876666778888888888888888777777788888888888877 4555555667788888888888888887664
Q ss_pred hhhhcccCCcEEEecccccCCCcchHHhhhcCcCeeeccCCccCCCCCcccccccccceeccccccccccCCcccccCCC
Q 047901 306 EALGFMFKLFYLNFSHNQFSQEIPEDLALLAHLSELDLSHNLFKGSIPSRICNLESLEKLNLSHNNISGQIPACFIGMSG 385 (786)
Q Consensus 306 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 385 (786)
.+..+++|++|+|++|++++..|..|..+++|+.|+|++|+|++..+..|.++++|+.|+|++|+|+++.+..|..+++
T Consensus 202 -~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 280 (440)
T 3zyj_A 202 -NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHH 280 (440)
T ss_dssp -CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTT
T ss_pred -ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccC
Confidence 4677778888888888888777778888888888888888888777778888888888888888888777777888888
Q ss_pred ceEEeccCCcccc
Q 047901 386 LLSIDISYNELRG 398 (786)
Q Consensus 386 L~~L~l~~N~l~~ 398 (786)
|+.|+|++|++.+
T Consensus 281 L~~L~L~~Np~~C 293 (440)
T 3zyj_A 281 LERIHLHHNPWNC 293 (440)
T ss_dssp CCEEECCSSCEEC
T ss_pred CCEEEcCCCCccC
Confidence 8888888888754
No 307
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=8.1e-30 Score=266.24 Aligned_cols=170 Identities=23% Similarity=0.218 Sum_probs=78.8
Q ss_pred ccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCCCCccccccc
Q 047901 187 DFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISL 266 (786)
Q Consensus 187 ~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L 266 (786)
.|..+++|++|+|++|+++++.+..|..+++|++|++++|+++++.+..|..+++|+.|+|++|++++..+..|..+++|
T Consensus 100 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 179 (285)
T 1ozn_A 100 TFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSL 179 (285)
T ss_dssp TTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTC
T ss_pred HhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCcccc
Confidence 34444444444444444444444444444444444444444444333344444444444444444444444444444444
Q ss_pred ccccccccccCCCCccccccCCcCceeccccccccccchhhhhcccCCcEEEecccccCCCcchHHhhhcCcCeeeccCC
Q 047901 267 NKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQEIPEDLALLAHLSELDLSHN 346 (786)
Q Consensus 267 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 346 (786)
+.|+|++|++++..|..|..+++|+.|++++|+++.+++..|..+++|++|++++|.+....+.. ..+..++.+..+.|
T Consensus 180 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~~l~~~~~~~~ 258 (285)
T 1ozn_A 180 DRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSS 258 (285)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHHHHHHCCSEEC
T ss_pred CEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHHHHHHhcccccC
Confidence 44444444444444444444555555555555555444444444555555555555554322211 11223444445555
Q ss_pred ccCCCCCcccc
Q 047901 347 LFKGSIPSRIC 357 (786)
Q Consensus 347 ~l~~~~~~~~~ 357 (786)
.+....|..+.
T Consensus 259 ~~~c~~p~~l~ 269 (285)
T 1ozn_A 259 EVPCSLPQRLA 269 (285)
T ss_dssp CCBEEESGGGT
T ss_pred ccccCCchHhC
Confidence 55555555443
No 308
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=2.1e-29 Score=263.06 Aligned_cols=235 Identities=22% Similarity=0.175 Sum_probs=144.6
Q ss_pred CCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCcc-CcccCC-CCCCCCCCcEEE
Q 047901 26 PHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQ-FSGTFP-PICNLSNLKYIS 103 (786)
Q Consensus 26 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~-~~~~l~~L~~L~ 103 (786)
++|++|+|++|+++++.+..|..+++|++|+|++|+|+++.|.+|..+++|++|+|++|+ ++.+.+ .+..+++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 445555555555555444555555555555555555554445555555555555555554 444422 244455555555
Q ss_pred ccCCcCcccCchhhcccCCcceeccccccccccCChhhhccCccceeecccccccCCCCC-cCCCCCCcEEEccCccccc
Q 047901 104 LHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPN-LRNCRSLVRAHLGRNNLTG 182 (786)
Q Consensus 104 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~-l~~l~~L~~L~L~~N~l~~ 182 (786)
|++|+++++.+..|.++++|++|++++|+++ ..++. +.++++|+.|++++|+|++
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~------------------------~~~~~~~~~l~~L~~L~l~~n~l~~ 167 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQ------------------------ALPDDTFRDLGNLTHLFLHGNRISS 167 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCC------------------------CCCTTTTTTCTTCCEEECCSSCCCE
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCCccc------------------------ccCHhHhccCCCccEEECCCCcccc
Confidence 5555555444444445555555555544444 43333 5566777777777777777
Q ss_pred ccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCCCCccc
Q 047901 183 NISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGR 262 (786)
Q Consensus 183 ~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~ 262 (786)
+.+..|..+++|++|+|++|+++++.|..|..+++|+.|+|++|+++++.+..+..+++|+.|+|++|.+....+. ..-
T Consensus 168 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~-~~~ 246 (285)
T 1ozn_A 168 VPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA-RPL 246 (285)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGG-HHH
T ss_pred cCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCc-HHH
Confidence 7777788888888888888888888888888888888888888888876666788888888888888887633221 112
Q ss_pred ccccccccccccccCCCCccccc
Q 047901 263 LISLNKLILRGNQLSGHLPRALG 285 (786)
Q Consensus 263 l~~L~~L~L~~N~l~~~~~~~~~ 285 (786)
...++.+..+.+.+....|..+.
T Consensus 247 ~~~l~~~~~~~~~~~c~~p~~l~ 269 (285)
T 1ozn_A 247 WAWLQKFRGSSSEVPCSLPQRLA 269 (285)
T ss_dssp HHHHHHCCSEECCCBEEESGGGT
T ss_pred HHHHHhcccccCccccCCchHhC
Confidence 23456666666766655555544
No 309
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=5e-29 Score=285.05 Aligned_cols=94 Identities=26% Similarity=0.251 Sum_probs=47.9
Q ss_pred CCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCCCCCCCCCCcEEEccC
Q 047901 27 HLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFPPICNLSNLKYISLHN 106 (786)
Q Consensus 27 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~ 106 (786)
+++.|++++|.++. +|..+. ++|++|+|++|+|+.+ |. .+++|++|+|++|+|++++. .+++|++|+|++
T Consensus 41 ~l~~L~ls~n~L~~-lp~~l~--~~L~~L~L~~N~l~~l-p~---~l~~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~ 110 (622)
T 3g06_A 41 GNAVLNVGESGLTT-LPDCLP--AHITTLVIPDNNLTSL-PA---LPPELRTLEVSGNQLTSLPV---LPPGLLELSIFS 110 (622)
T ss_dssp CCCEEECCSSCCSC-CCSCCC--TTCSEEEECSCCCSCC-CC---CCTTCCEEEECSCCCSCCCC---CCTTCCEEEECS
T ss_pred CCcEEEecCCCcCc-cChhhC--CCCcEEEecCCCCCCC-CC---cCCCCCEEEcCCCcCCcCCC---CCCCCCEEECcC
Confidence 35566666666542 233332 4556666666665532 22 34555555555555554443 345555555555
Q ss_pred CcCcccCchhhcccCCcceecccccccc
Q 047901 107 NKLSGSIPEEIGNLMKLSYLMLDTNQFT 134 (786)
Q Consensus 107 N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 134 (786)
|+|++++. .+++|++|++++|+++
T Consensus 111 N~l~~l~~----~l~~L~~L~L~~N~l~ 134 (622)
T 3g06_A 111 NPLTHLPA----LPSGLCKLWIFGNQLT 134 (622)
T ss_dssp CCCCCCCC----CCTTCCEEECCSSCCS
T ss_pred CcCCCCCC----CCCCcCEEECCCCCCC
Confidence 55554332 3344555555555544
No 310
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=9.6e-29 Score=282.74 Aligned_cols=248 Identities=22% Similarity=0.186 Sum_probs=116.8
Q ss_pred CCCCEEeCCCccCcccCCCCCCCCCCcEEEccCCcCcccCchhhcccCCcceeccccccccccCChhhhccCccceeecc
Q 047901 74 THLFSLDLSLNQFSGTFPPICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVN 153 (786)
Q Consensus 74 ~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~ 153 (786)
++|++|+|++|+|+.++. .+++|++|+|++|+|+++++ .+++|++|+|++|++++. |. .+++|+.|+++
T Consensus 61 ~~L~~L~L~~N~l~~lp~---~l~~L~~L~Ls~N~l~~lp~----~l~~L~~L~Ls~N~l~~l-~~---~l~~L~~L~L~ 129 (622)
T 3g06_A 61 AHITTLVIPDNNLTSLPA---LPPELRTLEVSGNQLTSLPV----LPPGLLELSIFSNPLTHL-PA---LPSGLCKLWIF 129 (622)
T ss_dssp TTCSEEEECSCCCSCCCC---CCTTCCEEEECSCCCSCCCC----CCTTCCEEEECSCCCCCC-CC---CCTTCCEEECC
T ss_pred CCCcEEEecCCCCCCCCC---cCCCCCEEEcCCCcCCcCCC----CCCCCCEEECcCCcCCCC-CC---CCCCcCEEECC
Confidence 344444444444443332 23444444444444443222 334444444444444422 11 23344444444
Q ss_pred cccccCCCCCcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCC
Q 047901 154 DNHFLGSIPNLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIP 233 (786)
Q Consensus 154 ~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 233 (786)
+|+++.++.. +++|+.|++++|+|++++. .+++|+.|++++|+|+++. ..+++|+.|+|++|+|+++ |
T Consensus 130 ~N~l~~lp~~---l~~L~~L~Ls~N~l~~l~~----~~~~L~~L~L~~N~l~~l~----~~~~~L~~L~Ls~N~l~~l-~ 197 (622)
T 3g06_A 130 GNQLTSLPVL---PPGLQELSVSDNQLASLPA----LPSELCKLWAYNNQLTSLP----MLPSGLQELSVSDNQLASL-P 197 (622)
T ss_dssp SSCCSCCCCC---CTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSCCC----CCCTTCCEEECCSSCCSCC-C
T ss_pred CCCCCcCCCC---CCCCCEEECcCCcCCCcCC----ccCCCCEEECCCCCCCCCc----ccCCCCcEEECCCCCCCCC-C
Confidence 4444433321 2344444444444443221 2234444455554444332 2234455555555555432 2
Q ss_pred ccccCCccccEEEeecccccccCCCCcccccccccccccccccCCCCccccccCCcCceeccccccccccchhhhhcccC
Q 047901 234 PEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSILEALGFMFK 313 (786)
Q Consensus 234 ~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 313 (786)
.. +++|+.|++++|.++. +|.. +++|+.|+|++|+|++++ ..+++|+.|+|++|+|+.++. .+++
T Consensus 198 ~~---~~~L~~L~L~~N~l~~-l~~~---~~~L~~L~Ls~N~L~~lp----~~l~~L~~L~Ls~N~L~~lp~----~~~~ 262 (622)
T 3g06_A 198 TL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTSLP----VLPSELKELMVSGNRLTSLPM----LPSG 262 (622)
T ss_dssp CC---CTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCCC----CCCTTCCEEECCSSCCSCCCC----CCTT
T ss_pred Cc---cchhhEEECcCCcccc-cCCC---CCCCCEEEccCCccCcCC----CCCCcCcEEECCCCCCCcCCc----cccc
Confidence 21 2445555555555542 2221 245555555555555432 334556666666666665443 3456
Q ss_pred CcEEEecccccCCCcchHHhhhcCcCeeeccCCccCCCCCccccccc
Q 047901 314 LFYLNFSHNQFSQEIPEDLALLAHLSELDLSHNLFKGSIPSRICNLE 360 (786)
Q Consensus 314 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 360 (786)
|+.|+|++|+|+ .+|..|..+++|+.|+|++|++++..|..+..++
T Consensus 263 L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 263 LLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp CCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 666666666666 4455666677777777777777665555554443
No 311
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=7.1e-31 Score=278.47 Aligned_cols=256 Identities=20% Similarity=0.139 Sum_probs=167.6
Q ss_pred eEEEEcCCCCCcccCCcCccCCCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCC
Q 047901 3 VNSINLTSTGLKGTLQEFSFSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLS 82 (786)
Q Consensus 3 ~~~l~l~~~~l~~~l~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 82 (786)
++.++++.+++...+ ...|..+++|++|+|++|+++++.|..|.++++|++|+|++|++++..+ |..+++|++|+|+
T Consensus 12 l~i~~ls~~~l~~~~-~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 12 YKIEKVTDSSLKQAL-ASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEESCCTTTHHHHH-HHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred eeEeeccccchhhhH-HHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 455667777766333 3356777788888888888887777888888888888888888876544 7888888888888
Q ss_pred CccCcccCCCCCCCCCCcEEEccCCcCcccCchhhcccCCcceeccccccccccCChhhhccCccceeecccccccCCCC
Q 047901 83 LNQFSGTFPPICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIP 162 (786)
Q Consensus 83 ~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~ 162 (786)
+|++++++. .++|++|++++|+++++.+.. +++|++|++++|++++..+..+..+++|+.|++++|.+++..+
T Consensus 89 ~n~l~~l~~----~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 161 (317)
T 3o53_A 89 NNYVQELLV----GPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNF 161 (317)
T ss_dssp SSEEEEEEE----CTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEG
T ss_pred CCccccccC----CCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccH
Confidence 888876543 378888888888888765543 5678888888888877666667667777777777766665433
Q ss_pred C-c-CCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCc
Q 047901 163 N-L-RNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSS 240 (786)
Q Consensus 163 ~-l-~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 240 (786)
. + ..+++|+.|+|++|+|+++.. ...+++|++|+|++|+|+++.+. |..+++|+.|+|++|+|++ +|..+..++
T Consensus 162 ~~~~~~l~~L~~L~L~~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~l~~~-~~~l~~L~~L~L~~N~l~~-l~~~~~~l~ 237 (317)
T 3o53_A 162 AELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLVL-IEKALRFSQ 237 (317)
T ss_dssp GGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCCE-ECTTCCCCT
T ss_pred HHHhhccCcCCEEECCCCcCccccc--ccccccCCEEECCCCcCCcchhh-hcccCcccEEECcCCcccc-hhhHhhcCC
Confidence 2 2 345666666666666665522 22356666666666666554333 5555666666666666653 344555555
Q ss_pred cccEEEeeccccc-ccCCCCccccccccccccc
Q 047901 241 QLHVLDLSSNHIA-GEIPMELGRLISLNKLILR 272 (786)
Q Consensus 241 ~L~~L~Ls~N~i~-~~~~~~~~~l~~L~~L~L~ 272 (786)
+|+.|+|++|.+. +..+..+..+++|+.|+++
T Consensus 238 ~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 238 NLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp TCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHH
T ss_pred CCCEEEccCCCccCcCHHHHHhccccceEEECC
Confidence 6666666666555 4444455555555555555
No 312
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=3.3e-29 Score=266.52 Aligned_cols=234 Identities=18% Similarity=0.192 Sum_probs=135.2
Q ss_pred CCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCCCCCCCCCCcEEEcc
Q 047901 26 PHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFPPICNLSNLKYISLH 105 (786)
Q Consensus 26 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~ 105 (786)
++++.|+|++|+++ .+|..+..+++|++|+|++|+|+ .+|..|+.+++|++|+|++|+++.++..+..+++|++|+|+
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~~lp~~l~~l~~L~~L~L~ 158 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLRALPASIASLNRLRELSIR 158 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCCCCCGGGGGCTTCCEEEEE
T ss_pred cceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccccCcHHHhcCcCCCEEECC
Confidence 45556666666654 33444555556666666666655 45555555556666666666555444445555555555555
Q ss_pred CCcCcccCchhhcccCCcceeccccccccccCChhhhccCccceeecccccccCCCCCcCCCCCCcEEEccCcccccccC
Q 047901 106 NNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNIS 185 (786)
Q Consensus 106 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~ 185 (786)
+|++.+..|..+... ..+..+..+++|+.|++++|.++.++..+.++++|+.|++++|++++++
T Consensus 159 ~n~~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~~l~- 222 (328)
T 4fcg_A 159 ACPELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLSALG- 222 (328)
T ss_dssp EETTCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCCCCC-
T ss_pred CCCCccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCCcCc-
Confidence 555554444443320 0000011244455555555555444444555555666666666666433
Q ss_pred cccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCCCCcccccc
Q 047901 186 EDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLIS 265 (786)
Q Consensus 186 ~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~ 265 (786)
..|..+++|++|+|++|++.+..|..|..+++|++|+|++|++.+.+|..+.++++|+.|+|++|++.+.+|..+.++++
T Consensus 223 ~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~ 302 (328)
T 4fcg_A 223 PAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPA 302 (328)
T ss_dssp GGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCT
T ss_pred hhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccC
Confidence 34666666666666666666666666666666777777666666666666666777777777776666666777777777
Q ss_pred cccccccccccC
Q 047901 266 LNKLILRGNQLS 277 (786)
Q Consensus 266 L~~L~L~~N~l~ 277 (786)
|+.+++..|.+.
T Consensus 303 L~~l~l~~~~~~ 314 (328)
T 4fcg_A 303 NCIILVPPHLQA 314 (328)
T ss_dssp TCEEECCGGGSC
T ss_pred ceEEeCCHHHHH
Confidence 777766666554
No 313
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=1.4e-30 Score=276.26 Aligned_cols=264 Identities=20% Similarity=0.199 Sum_probs=132.4
Q ss_pred EEeCCCccCcccCCC-CCCCCCCcEEEccCCcCcccCchhhcccCCcceeccccccccccCChhhhccCccceeeccccc
Q 047901 78 SLDLSLNQFSGTFPP-ICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNH 156 (786)
Q Consensus 78 ~L~Ls~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~ 156 (786)
.++++.+.+...+.. +..+++|++|+|++|+|+++.+..|.++++|++|+|++|++++..+
T Consensus 14 i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~------------------ 75 (317)
T 3o53_A 14 IEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD------------------ 75 (317)
T ss_dssp EESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE------------------
T ss_pred EeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh------------------
Confidence 345555555433322 2344556666666666665555556666666666666665553221
Q ss_pred ccCCCCCcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccc
Q 047901 157 FLGSIPNLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEI 236 (786)
Q Consensus 157 l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 236 (786)
+..+++|+.|++++|+|+++.+ .++|++|++++|+|+++.+.. +++|++|++++|+++++.+..+
T Consensus 76 -------~~~l~~L~~L~Ls~n~l~~l~~-----~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~ 140 (317)
T 3o53_A 76 -------LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDE 140 (317)
T ss_dssp -------ETTCTTCCEEECCSSEEEEEEE-----CTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCT
T ss_pred -------hhhcCCCCEEECcCCccccccC-----CCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhh
Confidence 3333444444444444443321 245555555555555443322 2344444444444444333344
Q ss_pred cCCccccEEEeecccccccCCCCcccccccccccccccccCCCCccccccCCcCceeccccccccccchhhhhcccCCcE
Q 047901 237 GNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSILEALGFMFKLFY 316 (786)
Q Consensus 237 ~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 316 (786)
..+++|+.|+|++|.+++..+..+. ..+++|+.|+|++|.++.++.. ..+++|++
T Consensus 141 ~~l~~L~~L~Ls~N~l~~~~~~~~~-----------------------~~l~~L~~L~L~~N~l~~~~~~--~~l~~L~~ 195 (317)
T 3o53_A 141 GCRSRVQYLDLKLNEIDTVNFAELA-----------------------ASSDTLEHLNLQYNFIYDVKGQ--VVFAKLKT 195 (317)
T ss_dssp GGGSSEEEEECTTSCCCEEEGGGGG-----------------------GGTTTCCEEECTTSCCCEEECC--CCCTTCCE
T ss_pred hccCCCCEEECCCCCCCcccHHHHh-----------------------hccCcCCEEECCCCcCcccccc--cccccCCE
Confidence 4444444444444444433333321 2344455555555554444221 12455555
Q ss_pred EEecccccCCCcchHHhhhcCcCeeeccCCccCCCCCcccccccccceecccccccc-ccCCcccccCCCceEEeccC-C
Q 047901 317 LNFSHNQFSQEIPEDLALLAHLSELDLSHNLFKGSIPSRICNLESLEKLNLSHNNIS-GQIPACFIGMSGLLSIDISY-N 394 (786)
Q Consensus 317 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~l~~-N 394 (786)
|+|++|++++.. ..|..+++|+.|+|++|+|+ .+|..+..+++|+.|++++|+++ +..|..+..+++|+.+++++ +
T Consensus 196 L~Ls~N~l~~l~-~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~ 273 (317)
T 3o53_A 196 LDLSSNKLAFMG-PEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVK 273 (317)
T ss_dssp EECCSSCCCEEC-GGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred EECCCCcCCcch-hhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCch
Confidence 555555555333 23556666666666666666 34555666666666666666666 45556666666666666663 3
Q ss_pred cccccCC
Q 047901 395 ELRGPIP 401 (786)
Q Consensus 395 ~l~~~~p 401 (786)
.+++..|
T Consensus 274 ~l~~~~~ 280 (317)
T 3o53_A 274 KLTGQNE 280 (317)
T ss_dssp HHHSSSS
T ss_pred hccCCch
Confidence 3444433
No 314
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=7.3e-29 Score=263.85 Aligned_cols=240 Identities=19% Similarity=0.226 Sum_probs=206.6
Q ss_pred CCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCCCCCCCCCCcEEEccCCcCcccCchhhcccCCcceec
Q 047901 48 NLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFPPICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYLM 127 (786)
Q Consensus 48 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 127 (786)
...+++.|+|++|+|+ .+|..+..+++|++|+|++|+++.++..+..+++|++|+|++|+++ ..|..|.++++|++|+
T Consensus 79 ~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLMELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp TSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCCCCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred cccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCccchhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 3478899999999998 5677788899999999999998877777888899999999999988 5577788889999999
Q ss_pred cccccccccCChhhhccCccceeecccccccCCCCCcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccc
Q 047901 128 LDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGE 207 (786)
Q Consensus 128 L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~ 207 (786)
|++|++.+.+|..+... . ....+.++++|+.|++++|+|+. .|..|..+++|++|+|++|+++++
T Consensus 157 L~~n~~~~~~p~~~~~~-----------~---~~~~~~~l~~L~~L~L~~n~l~~-lp~~l~~l~~L~~L~L~~N~l~~l 221 (328)
T 4fcg_A 157 IRACPELTELPEPLAST-----------D---ASGEHQGLVNLQSLRLEWTGIRS-LPASIANLQNLKSLKIRNSPLSAL 221 (328)
T ss_dssp EEEETTCCCCCSCSEEE-----------C----CCCEEESTTCCEEEEEEECCCC-CCGGGGGCTTCCEEEEESSCCCCC
T ss_pred CCCCCCccccChhHhhc-----------c---chhhhccCCCCCEEECcCCCcCc-chHhhcCCCCCCEEEccCCCCCcC
Confidence 99888777777755431 1 12236678999999999999994 567799999999999999999975
Q ss_pred cCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCCCCcccccccccccccccccCCCCccccccC
Q 047901 208 ISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLL 287 (786)
Q Consensus 208 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 287 (786)
|..|..+++|++|+|++|++.+.+|..|.++++|+.|+|++|.+.+.+|..+.++++|+.|+|++|.+.+.+|..+..+
T Consensus 222 -~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L 300 (328)
T 4fcg_A 222 -GPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQL 300 (328)
T ss_dssp -CGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGS
T ss_pred -chhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhc
Confidence 4569999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCceeccccccccccch
Q 047901 288 TELEYFDLSSNRLNNSIL 305 (786)
Q Consensus 288 ~~L~~L~L~~N~l~~~~~ 305 (786)
++|+.+++..|.+..+..
T Consensus 301 ~~L~~l~l~~~~~~~l~~ 318 (328)
T 4fcg_A 301 PANCIILVPPHLQAQLDQ 318 (328)
T ss_dssp CTTCEEECCGGGSCC---
T ss_pred cCceEEeCCHHHHHHHhh
Confidence 999999999888765443
No 315
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=4.4e-30 Score=271.74 Aligned_cols=252 Identities=18% Similarity=0.171 Sum_probs=185.2
Q ss_pred hhhcccCCcceeccccccccccCChhhhccCccceeecccccccCCCCCcCCCCCCcEEEccCcccccccCcccC-----
Q 047901 115 EEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNISEDFG----- 189 (786)
Q Consensus 115 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~f~----- 189 (786)
+.+.+.++|++|++++|.+ .+|..+... |+.|++++|.+... ..+..+.
T Consensus 37 ~~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~----------------------~~~~~~~~~~~~ 90 (312)
T 1wwl_A 37 ELYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAA----------------------RIPSRILFGALR 90 (312)
T ss_dssp EEEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEE----------------------ECBHHHHHHHHH
T ss_pred EEEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCC----------------------CcCHHHHHHHHH
Confidence 3456777888888888888 566666554 77777777766421 1112221
Q ss_pred --CCCCCCEEeccCCccccccCcCc--cCCCCccEEEccCcccCCCCCccccCC-----ccccEEEeecccccccCCCCc
Q 047901 190 --IYPNLKFLDLSHNNFYGEISSNW--GKCHRLGTLIVSGNNITGRIPPEIGNS-----SQLHVLDLSSNHIAGEIPMEL 260 (786)
Q Consensus 190 --~l~~L~~L~L~~N~i~~~~~~~~--~~l~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~Ls~N~i~~~~~~~~ 260 (786)
.+++|++|+|++|++++..|..+ ..+++|++|+|++|++++. |..+..+ ++|++|+|++|+|.+..+..|
T Consensus 91 ~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~ 169 (312)
T 1wwl_A 91 VLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQV 169 (312)
T ss_dssp HHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTC
T ss_pred hcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHh
Confidence 46667777777777766666554 6677777777777777755 6666665 777777777777777666777
Q ss_pred ccccccccccccccccCCC--Ccccc--ccCCcCceeccccccccc---cchhhhhcccCCcEEEecccccCCCcc-hHH
Q 047901 261 GRLISLNKLILRGNQLSGH--LPRAL--GLLTELEYFDLSSNRLNN---SILEALGFMFKLFYLNFSHNQFSQEIP-EDL 332 (786)
Q Consensus 261 ~~l~~L~~L~L~~N~l~~~--~~~~~--~~l~~L~~L~L~~N~l~~---~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~ 332 (786)
.++++|+.|+|++|++.+. .+..+ ..+++|+.|+|++|+++. +....+..+++|++|+|++|++++..| ..+
T Consensus 170 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 249 (312)
T 1wwl_A 170 RVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSC 249 (312)
T ss_dssp CCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCC
T ss_pred ccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhh
Confidence 7777777777777776543 22233 778888888888888884 334556678899999999999987664 456
Q ss_pred hhhcCcCeeeccCCccCCCCCcccccccccceeccccccccccCCcccccCCCceEEeccCCcccc
Q 047901 333 ALLAHLSELDLSHNLFKGSIPSRICNLESLEKLNLSHNNISGQIPACFIGMSGLLSIDISYNELRG 398 (786)
Q Consensus 333 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 398 (786)
..+++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|+.|++++|++++
T Consensus 250 ~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 250 DWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred hhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 67899999999999998 6677666 8999999999999977 65 8899999999999999875
No 316
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=6.3e-30 Score=270.49 Aligned_cols=247 Identities=22% Similarity=0.227 Sum_probs=131.3
Q ss_pred CCCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccc-cCCcccc-------CCCCCCEEeCCCccCcccCC-CC
Q 047901 23 SSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSG-KIPPEIG-------LLTHLFSLDLSLNQFSGTFP-PI 93 (786)
Q Consensus 23 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~-------~l~~L~~L~Ls~N~l~~~~~-~~ 93 (786)
.+.++|++|++++|.+ ..|..+... |+.|+|++|+++. ..|..+. .+++|++|+|++|++++..+ .+
T Consensus 40 ~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 115 (312)
T 1wwl_A 40 GGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPL 115 (312)
T ss_dssp EEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCS
T ss_pred ccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHH
Confidence 3444555555555555 333333322 5555555555532 2333333 45555555555555554322 22
Q ss_pred --CCCCCCcEEEccCCcCcccCchhhccc-----CCcceeccccccccccCChhhhccCccceeecccccccCCCCCcCC
Q 047901 94 --CNLSNLKYISLHNNKLSGSIPEEIGNL-----MKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRN 166 (786)
Q Consensus 94 --~~l~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~ 166 (786)
..+++|++|+|++|+++++ |..|.++ ++|++|+|++|++++..|..|. +
T Consensus 116 ~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~-----------------------~ 171 (312)
T 1wwl_A 116 LEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVR-----------------------V 171 (312)
T ss_dssp SSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCC-----------------------C
T ss_pred HHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhc-----------------------c
Confidence 4555555555555555544 4555554 5555555555555544444444 4
Q ss_pred CCCCcEEEccCcccccc--cCcc--cCCCCCCCEEeccCCcccc---ccCcCccCCCCccEEEccCcccCCCCC-ccccC
Q 047901 167 CRSLVRAHLGRNNLTGN--ISED--FGIYPNLKFLDLSHNNFYG---EISSNWGKCHRLGTLIVSGNNITGRIP-PEIGN 238 (786)
Q Consensus 167 l~~L~~L~L~~N~l~~~--~~~~--f~~l~~L~~L~L~~N~i~~---~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~ 238 (786)
+++|+.|+|++|++.+. .+.. |..+++|++|+|++|+|++ +....+..+++|++|+|++|++++..| ..+..
T Consensus 172 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 251 (312)
T 1wwl_A 172 FPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDW 251 (312)
T ss_dssp CSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCC
T ss_pred CCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhh
Confidence 45555555555554332 1112 2555666666666666652 222334455666666666666665443 34445
Q ss_pred CccccEEEeecccccccCCCCcccccccccccccccccCCCCccccccCCcCceeccccccccc
Q 047901 239 SSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNN 302 (786)
Q Consensus 239 l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 302 (786)
+++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|+.|++++|++++
T Consensus 252 l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 252 PSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred cCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 566666666666666 4444444 5666666666666655 33 6666667777777766654
No 317
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=8.7e-30 Score=289.61 Aligned_cols=188 Identities=21% Similarity=0.209 Sum_probs=132.8
Q ss_pred eccccCceEEEEE-cCCCCEEEEEEcCCCCCCC------chhhHHHHHHHHHHHhhc-CCCcccceeeEEecCCeeeEEE
Q 047901 514 IGKGEHRSVYRAK-LPSGDKIAVKKFNSPFPND------QMSDQKEFLNEIKALTKI-RHRNIVKFYGFCSHVRHSFVVY 585 (786)
Q Consensus 514 ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~------~~~~~~~~~~e~~~l~~l-~hpniv~l~~~~~~~~~~~lv~ 585 (786)
.+.|++|.+..++ ..-|+.+|||++....... .....++|.+|+++|+++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4566666666554 2358899999997643211 122345799999999999 6999999999999999999999
Q ss_pred eccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecCCC
Q 047901 586 EYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPN 665 (786)
Q Consensus 586 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 665 (786)
||++|++|.++|.+. ++++.. +|+.||+.||+|+|++ |||||||||+|||++.++.+||+|||+|+.....
T Consensus 322 Eyv~G~~L~d~i~~~---~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 322 EKLPGRLLSDMLAAG---EEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp ECCCSEEHHHHHHTT---CCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred ecCCCCcHHHHHHhC---CCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence 999999999999864 455554 4889999999999999 9999999999999999999999999999987665
Q ss_pred CCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCC
Q 047901 666 SSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721 (786)
Q Consensus 666 ~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~P 721 (786)
.......+||+.|||| |...+ .+..++|+||+|++++++.++..|
T Consensus 393 ~~~~~t~vGTp~YmAP----------E~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 393 CSWPTNLVQSFFVFVN----------ELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp -CCSHHHHHHHHHHHH----------HHC------------------CCCCTTHHH
T ss_pred CccccCceechhhccH----------HHhCC-CCCCcccccccccchhhhccccch
Confidence 5555667899999999 55543 456789999999998888766544
No 318
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=1.7e-30 Score=300.74 Aligned_cols=372 Identities=14% Similarity=0.034 Sum_probs=277.0
Q ss_pred CCCCCcEEECCCCCccccCchhccCC--CCCCEEeCcCCc-ccc-cCCccccCCCCCCEEeCCCccCcccCC-----CCC
Q 047901 24 SFPHLAYLDLSINGFFGTLPPQVRNL--SKLKYLDLSENE-LSG-KIPPEIGLLTHLFSLDLSLNQFSGTFP-----PIC 94 (786)
Q Consensus 24 ~l~~L~~L~L~~n~i~~~~~~~~~~l--~~L~~L~L~~N~-l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~-----~~~ 94 (786)
.+++|++|+|++|.+++..+..+... .+|++|+|++|. ++. ..+.....+++|++|+|++|.+++... .+.
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~ 189 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQ 189 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHh
Confidence 68899999999998877666666653 459999999987 221 122233478999999999998865421 134
Q ss_pred CCCCCcEEEccCCcCcccC----chhhcccCCcceeccccccccccCChhhhccCccceeeccccccc----CCCCCcCC
Q 047901 95 NLSNLKYISLHNNKLSGSI----PEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFL----GSIPNLRN 166 (786)
Q Consensus 95 ~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~----~~~~~l~~ 166 (786)
.+++|++|+|++|.++++. +..+.++++|++|+|++|.+.+ +|..+..+++|+.|+++.+... .....+..
T Consensus 190 ~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~ 268 (592)
T 3ogk_B 190 HNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVF 268 (592)
T ss_dssp HCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCC
T ss_pred cCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhc
Confidence 6889999999999997433 4456788999999999999885 6788999999999999864332 12335778
Q ss_pred CCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccC-cCccCCCCccEEEccCcccCC-CCCccccCCccccE
Q 047901 167 CRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEIS-SNWGKCHRLGTLIVSGNNITG-RIPPEIGNSSQLHV 244 (786)
Q Consensus 167 l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~ 244 (786)
+++|+.|.+.++... ..+..+..+++|++|+|++|.++.... ..+..+++|++|+++ |.+.+ ..+..+..+++|+.
T Consensus 269 ~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~ 346 (592)
T 3ogk_B 269 PRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKR 346 (592)
T ss_dssp CTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCE
T ss_pred cccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCE
Confidence 889999999886544 345677888999999999999765433 336789999999999 44442 23334466789999
Q ss_pred EEee-----------cccccccCCC-CcccccccccccccccccCCCCcccccc-CCcCceeccc----cccccccc---
Q 047901 245 LDLS-----------SNHIAGEIPM-ELGRLISLNKLILRGNQLSGHLPRALGL-LTELEYFDLS----SNRLNNSI--- 304 (786)
Q Consensus 245 L~Ls-----------~N~i~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~L~----~N~l~~~~--- 304 (786)
|+|+ .|.++..... .+..+++|+.|+++.|.+++..+..+.. +++|+.|+++ .|.+++.+
T Consensus 347 L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~ 426 (592)
T 3ogk_B 347 LRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDN 426 (592)
T ss_dssp EEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHH
T ss_pred EEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHH
Confidence 9999 3666643222 2455789999999999998665555654 8899999996 67787642
Q ss_pred --hhhhhcccCCcEEEeccc--ccCCCcchHHhh-hcCcCeeeccCCccCC-CCCcccccccccceecccccccccc-CC
Q 047901 305 --LEALGFMFKLFYLNFSHN--QFSQEIPEDLAL-LAHLSELDLSHNLFKG-SIPSRICNLESLEKLNLSHNNISGQ-IP 377 (786)
Q Consensus 305 --~~~~~~l~~L~~L~L~~N--~l~~~~~~~~~~-l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~-~p 377 (786)
...+..+++|++|++++| .++......+.. +++|+.|+|++|.+++ .++..+.++++|+.|++++|++++. ++
T Consensus 427 ~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 506 (592)
T 3ogk_B 427 GVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIA 506 (592)
T ss_dssp HHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHH
T ss_pred HHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHH
Confidence 334677899999999854 366555555544 7899999999999875 3345567889999999999998754 34
Q ss_pred cccccCCCceEEeccCCcccc
Q 047901 378 ACFIGMSGLLSIDISYNELRG 398 (786)
Q Consensus 378 ~~~~~l~~L~~L~l~~N~l~~ 398 (786)
..+..+++|+.|++++|+++.
T Consensus 507 ~~~~~l~~L~~L~ls~n~it~ 527 (592)
T 3ogk_B 507 AAVTKLPSLRYLWVQGYRASM 527 (592)
T ss_dssp HHHHHCSSCCEEEEESCBCCT
T ss_pred HHHHhcCccCeeECcCCcCCH
Confidence 445678999999999999875
No 319
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=1.4e-28 Score=275.88 Aligned_cols=237 Identities=21% Similarity=0.173 Sum_probs=146.7
Q ss_pred CCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCCCCCCCCCCcEEE
Q 047901 24 SFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFPPICNLSNLKYIS 103 (786)
Q Consensus 24 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~ 103 (786)
.+++|++|+|++|.++++.|..|.++++|++|+|++|+|++..| |..+++|++|+|++|+|+++++. ++|++|+
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~----~~L~~L~ 105 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVG----PSIETLH 105 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEEC----TTCCEEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCC----CCcCEEE
Confidence 44578888888888888878888888888888888888876554 88888888888888888766542 7888888
Q ss_pred ccCCcCcccCchhhcccCCcceeccccccccccCChhhhccCccceeecccccccCCCCCcCCCCCCcEEEccCcccccc
Q 047901 104 LHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGN 183 (786)
Q Consensus 104 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~ 183 (786)
|++|+|+++++. .+++|++|+|++|.+++..|..+..+++|+.|+|++|.+++ +
T Consensus 106 L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-----------------------~ 159 (487)
T 3oja_A 106 AANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDT-----------------------V 159 (487)
T ss_dssp CCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCE-----------------------E
T ss_pred CcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCC-----------------------c
Confidence 888888876654 34678888888888877666666666666666666665554 3
Q ss_pred cCcccC-CCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCCCCccc
Q 047901 184 ISEDFG-IYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGR 262 (786)
Q Consensus 184 ~~~~f~-~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~ 262 (786)
.+..|. .+++|++|+|++|.|+++.+ +..+++|+.|+|++|+|+++ |+.|..+++|+.|+|++|.|++ +|..+..
T Consensus 160 ~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~ 235 (487)
T 3oja_A 160 NFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRF 235 (487)
T ss_dssp EGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCC
T ss_pred ChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhcc
Confidence 333332 34444444444444444422 12244455555555555432 2224445555555555555543 3344455
Q ss_pred ccccccccccccccC-CCCccccccCCcCceeccc
Q 047901 263 LISLNKLILRGNQLS-GHLPRALGLLTELEYFDLS 296 (786)
Q Consensus 263 l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~ 296 (786)
+++|+.|++++|.+. +..|..+..++.|+.++++
T Consensus 236 l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 236 SQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp CTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 555555555555554 3344445555555555554
No 320
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=3.9e-30 Score=297.82 Aligned_cols=390 Identities=15% Similarity=0.066 Sum_probs=289.3
Q ss_pred CeEEEEcCCCCCcccCCcCccCC-CCC-CcEEECCCCC-ccc-cCchhccCCCCCCEEeCcCCcccccC----CccccCC
Q 047901 2 RVNSINLTSTGLKGTLQEFSFSS-FPH-LAYLDLSING-FFG-TLPPQVRNLSKLKYLDLSENELSGKI----PPEIGLL 73 (786)
Q Consensus 2 ~~~~l~l~~~~l~~~l~~~~f~~-l~~-L~~L~L~~n~-i~~-~~~~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l 73 (786)
+++.|+|++|.+.+.... .+.. ++. |++|+|++|. +.. ..+..+.++++|++|+|++|.+++.. +..+..+
T Consensus 113 ~L~~L~L~~~~i~~~~~~-~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~ 191 (592)
T 3ogk_B 113 QLKSVHFRRMIVSDLDLD-RLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHN 191 (592)
T ss_dssp TCCEEEEESCBCCHHHHH-HHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHC
T ss_pred CCCeEEeeccEecHHHHH-HHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcC
Confidence 477888888866543322 2333 445 9999999987 221 12334458899999999999987653 3345788
Q ss_pred CCCCEEeCCCccCcccC-----CCCCCCCCCcEEEccCCcCcccCchhhcccCCcceecccccccc---ccCChhhhccC
Q 047901 74 THLFSLDLSLNQFSGTF-----PPICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQFT---GQLPRNICRSG 145 (786)
Q Consensus 74 ~~L~~L~Ls~N~l~~~~-----~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~---~~~~~~~~~~~ 145 (786)
++|++|+|++|++++.. ..+.++++|++|+|++|.+.+ .+..+.++++|++|+++++... ...+..+..++
T Consensus 192 ~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~ 270 (592)
T 3ogk_B 192 TSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPR 270 (592)
T ss_dssp CCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCT
T ss_pred CCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccc
Confidence 99999999999997332 224578999999999999986 5688999999999999864433 23445677788
Q ss_pred ccceeecccccccCCCCCcCCCCCCcEEEccCcccccccC-cccCCCCCCCEEeccCCcccc-ccCcCccCCCCccEEEc
Q 047901 146 LLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNIS-EDFGIYPNLKFLDLSHNNFYG-EISSNWGKCHRLGTLIV 223 (786)
Q Consensus 146 ~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~~f~~l~~L~~L~L~~N~i~~-~~~~~~~~l~~L~~L~L 223 (786)
+|+.|+++++.....+..+..+++|+.|++++|.++.... ..+..+++|++|+|+ |.+.. ..+..+..+++|++|+|
T Consensus 271 ~L~~L~l~~~~~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L 349 (592)
T 3ogk_B 271 KLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRI 349 (592)
T ss_dssp TCCEEEETTCCTTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEE
T ss_pred cccccCccccchhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEe
Confidence 9999999987555555557789999999999999875443 346889999999999 54443 33334467899999999
Q ss_pred c-----------CcccCCCC-CccccCCccccEEEeecccccccCCCCccc-cccccccccc----ccccCCC-----Cc
Q 047901 224 S-----------GNNITGRI-PPEIGNSSQLHVLDLSSNHIAGEIPMELGR-LISLNKLILR----GNQLSGH-----LP 281 (786)
Q Consensus 224 ~-----------~N~l~~~~-~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~-l~~L~~L~L~----~N~l~~~-----~~ 281 (786)
+ .|.+++.. +..+..+++|+.|+++.|.+++..+..+.. +++|+.|+++ .|.+++. .+
T Consensus 350 ~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~ 429 (592)
T 3ogk_B 350 ERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVR 429 (592)
T ss_dssp ECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHH
T ss_pred ecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHH
Confidence 9 36666332 222456899999999999998776666665 8899999996 7788764 33
Q ss_pred cccccCCcCceeccccc--cccccchhhhh-cccCCcEEEecccccCCC-cchHHhhhcCcCeeeccCCccCCC-CCccc
Q 047901 282 RALGLLTELEYFDLSSN--RLNNSILEALG-FMFKLFYLNFSHNQFSQE-IPEDLALLAHLSELDLSHNLFKGS-IPSRI 356 (786)
Q Consensus 282 ~~~~~l~~L~~L~L~~N--~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~ 356 (786)
..+.++++|+.|+++.+ .++......+. .+++|++|++++|++++. .+..+..+++|+.|+|++|.+++. ++..+
T Consensus 430 ~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~ 509 (592)
T 3ogk_B 430 SLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAV 509 (592)
T ss_dssp HHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHH
T ss_pred HHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHH
Confidence 34678999999999753 36655444444 488999999999999753 344567889999999999998744 34445
Q ss_pred ccccccceeccccccccccCCccc-ccCCCceEEeccCC
Q 047901 357 CNLESLEKLNLSHNNISGQIPACF-IGMSGLLSIDISYN 394 (786)
Q Consensus 357 ~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~l~~N 394 (786)
..+++|+.|++++|+++..-...+ ..++.+....+..+
T Consensus 510 ~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 510 TKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp HHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred HhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 678999999999999986533333 35677766655554
No 321
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=2e-28 Score=274.62 Aligned_cols=235 Identities=24% Similarity=0.203 Sum_probs=137.4
Q ss_pred CCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCCCCCCCCCCcEEEccCCcCcccCchhhcccCCcceeccc
Q 047901 50 SKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFPPICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLD 129 (786)
Q Consensus 50 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 129 (786)
++|++|+|++|+|+++.|..|..+++|++|+|++|.+++.++ +..+++|++|+|++|+|+++++ .++|++|+++
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~ 107 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA 107 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE-CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc-cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECc
Confidence 377888888888877777777777777777777777776554 6667777777777777765432 2556666666
Q ss_pred cccccccCChhhhccCccceeecccccccCCCCCcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccC
Q 047901 130 TNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEIS 209 (786)
Q Consensus 130 ~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~ 209 (786)
+|.+++..+. .+++|+.|+|++|.|+++.+..|+.+++|++|+|++|.|+++.|
T Consensus 108 ~N~l~~~~~~--------------------------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 161 (487)
T 3oja_A 108 NNNISRVSCS--------------------------RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNF 161 (487)
T ss_dssp SSCCCCEEEC--------------------------CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEG
T ss_pred CCcCCCCCcc--------------------------ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcCh
Confidence 6655532111 12455566666666665555566666666666666666666555
Q ss_pred cCcc-CCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCCCCcccccccccccccccccCCCCccccccCC
Q 047901 210 SNWG-KCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLT 288 (786)
Q Consensus 210 ~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 288 (786)
..|. .+++|+.|+|++|.|+++. .+..+++|+.|+|++|.|++.+| .|..+++|+.|+|++|.|++ +|..+
T Consensus 162 ~~l~~~l~~L~~L~Ls~N~l~~~~--~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l---- 233 (487)
T 3oja_A 162 AELAASSDTLEHLNLQYNFIYDVK--GQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKAL---- 233 (487)
T ss_dssp GGGGGGTTTCCEEECTTSCCCEEE--CCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTC----
T ss_pred HHHhhhCCcccEEecCCCcccccc--ccccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhh----
Confidence 5554 4566666666666665441 12235555555555555553322 24455555555555555543 23334
Q ss_pred cCceeccccccccccchhhhhcccCCcEEEecccccC-CCcchHHhhhcCcCeeecc
Q 047901 289 ELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFS-QEIPEDLALLAHLSELDLS 344 (786)
Q Consensus 289 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~ 344 (786)
..+++|+.|++++|.+. +..|..+..++.|+.|+++
T Consensus 234 --------------------~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 234 --------------------RFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp --------------------CCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred --------------------ccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 44445555555555554 3445556666667777765
No 322
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.95 E-value=7.2e-27 Score=242.62 Aligned_cols=209 Identities=24% Similarity=0.198 Sum_probs=136.4
Q ss_pred CCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCCCCccccccccccccc
Q 047901 193 NLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILR 272 (786)
Q Consensus 193 ~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~ 272 (786)
+|++|+|++|+++++.+..|..+++|++|+|++|+++++.+..|.++++|+.|+|++|.+++..+..|.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 45555555555555555555555555555555555554444455555555555555555555555555555566666666
Q ss_pred ccccCCCCccccccCCcCceeccccccccccc-hhhhhcccCCcEEEecccccCCCcchHHhhhcCcC----eeeccCCc
Q 047901 273 GNQLSGHLPRALGLLTELEYFDLSSNRLNNSI-LEALGFMFKLFYLNFSHNQFSQEIPEDLALLAHLS----ELDLSHNL 347 (786)
Q Consensus 273 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~----~L~L~~N~ 347 (786)
+|.+.++.+..+..+++|+.|++++|.++.+. +..|..+++|++|+|++|++++..+..|..+++|+ .|++++|+
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 66665555555666666666666666666543 55666666777777777777666666676666666 78888888
Q ss_pred cCCCCCcccccccccceeccccccccccCCcccccCCCceEEeccCCcccccCCC
Q 047901 348 FKGSIPSRICNLESLEKLNLSHNNISGQIPACFIGMSGLLSIDISYNELRGPIPN 402 (786)
Q Consensus 348 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 402 (786)
+++..+..+.. .+|+.|++++|++++..+..|..+++|+.|++++|++.+..|.
T Consensus 189 l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 242 (276)
T 2z62_A 189 MNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 242 (276)
T ss_dssp CCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTT
T ss_pred ccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCc
Confidence 88655555544 4788999999998888777788889999999999998876554
No 323
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=8.7e-27 Score=241.99 Aligned_cols=225 Identities=27% Similarity=0.280 Sum_probs=191.3
Q ss_pred eecccccccCCCCCcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccC
Q 047901 150 LTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNIT 229 (786)
Q Consensus 150 L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 229 (786)
.+..+..+..++..+. ++|+.|++++|+|+++.+..|..+++|++|+|++|+++++.+..|..+++|++|+|++|+++
T Consensus 12 ~~c~~~~l~~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 89 (276)
T 2z62_A 12 YQCMELNFYKIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 89 (276)
T ss_dssp EECTTSCCSSCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred EEecCCCccccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccC
Confidence 3445555555555554 57888999999999888888999999999999999999888888999999999999999998
Q ss_pred CCCCccccCCccccEEEeecccccccCCCCcccccccccccccccccCCC-CccccccCCcCceeccccccccccchhhh
Q 047901 230 GRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGH-LPRALGLLTELEYFDLSSNRLNNSILEAL 308 (786)
Q Consensus 230 ~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 308 (786)
++.+..|.++++|+.|++++|.+.+..+..+..+++|++|++++|++++. .|..|..+++|+.|++++|+++.+.+..|
T Consensus 90 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 169 (276)
T 2z62_A 90 SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDL 169 (276)
T ss_dssp EECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGG
T ss_pred ccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHh
Confidence 88888899999999999999999877777889999999999999999875 48889999999999999999999888888
Q ss_pred hcccCCc----EEEecccccCCCcchHHhhhcCcCeeeccCCccCCCCCcccccccccceeccccccccccCC
Q 047901 309 GFMFKLF----YLNFSHNQFSQEIPEDLALLAHLSELDLSHNLFKGSIPSRICNLESLEKLNLSHNNISGQIP 377 (786)
Q Consensus 309 ~~l~~L~----~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 377 (786)
..+.+|+ .|++++|.+++..+..+.. .+|+.|+|++|++++..+..|.++++|+.|++++|++++..|
T Consensus 170 ~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 170 RVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp HHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred hhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 8888777 8999999998766665554 489999999999997777778999999999999999986544
No 324
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=2.5e-29 Score=291.19 Aligned_cols=369 Identities=15% Similarity=0.105 Sum_probs=211.0
Q ss_pred CCCCCCcEEECCCCCccccCchhcc-CCCCCCEEeCcCC-ccccc-CCccccCCCCCCEEeCCCccCcccCC-----CCC
Q 047901 23 SSFPHLAYLDLSINGFFGTLPPQVR-NLSKLKYLDLSEN-ELSGK-IPPEIGLLTHLFSLDLSLNQFSGTFP-----PIC 94 (786)
Q Consensus 23 ~~l~~L~~L~L~~n~i~~~~~~~~~-~l~~L~~L~L~~N-~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~-----~~~ 94 (786)
..+++|++|+|++|.+++..+..+. .+++|++|+|++| .++.. .+..+..+++|++|+|++|.+++... ...
T Consensus 102 ~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~ 181 (594)
T 2p1m_B 102 SSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPD 181 (594)
T ss_dssp HHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCT
T ss_pred HhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhh
Confidence 3567778888887777665555554 5777888888777 45432 33334467788888888877654221 123
Q ss_pred CCCCCcEEEccCCcCcccCchhh----cccCCcceeccccc-cccccCChhhhccCccceeecccc-------cccCCCC
Q 047901 95 NLSNLKYISLHNNKLSGSIPEEI----GNLMKLSYLMLDTN-QFTGQLPRNICRSGLLEILTVNDN-------HFLGSIP 162 (786)
Q Consensus 95 ~l~~L~~L~L~~N~l~~~~~~~~----~~l~~L~~L~L~~N-~l~~~~~~~~~~~~~L~~L~l~~N-------~l~~~~~ 162 (786)
.+++|++|+|++|. ..+....+ .++++|++|+|++| .++ .++..+..+++|+.|++..+ .+.+.++
T Consensus 182 ~~~~L~~L~l~~~~-~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~ 259 (594)
T 2p1m_B 182 TYTSLVSLNISCLA-SEVSFSALERLVTRCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSV 259 (594)
T ss_dssp TCCCCCEEECTTCC-SCCCHHHHHHHHHHCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHH
T ss_pred cCCcCcEEEecccC-CcCCHHHHHHHHHhCCCCcEEecCCCCcHH-HHHHHHhcCCcceEcccccccCccchhhHHHHHH
Confidence 56778888887776 22222223 34577888888777 444 36666777777777774433 3333333
Q ss_pred CcCCCCCCcEE-EccCcccccccCcccCCCCCCCEEeccCCccccccC-cCccCCCCccEEEccCcccCCC-CCccccCC
Q 047901 163 NLRNCRSLVRA-HLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEIS-SNWGKCHRLGTLIVSGNNITGR-IPPEIGNS 239 (786)
Q Consensus 163 ~l~~l~~L~~L-~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l 239 (786)
.+.++++|+.| .+.+.... ..+..+..+++|++|+|++|.++.... ..+..+++|++|++++| +.+. .+.....+
T Consensus 260 ~l~~~~~L~~Ls~~~~~~~~-~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~ 337 (594)
T 2p1m_B 260 ALSGCKELRCLSGFWDAVPA-YLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTC 337 (594)
T ss_dssp HHHTCTTCCEEECCBTCCGG-GGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHC
T ss_pred HHhcCCCcccccCCcccchh-hHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhC
Confidence 45566666666 23222211 122233356777777777777553222 12446677777777766 3311 11122246
Q ss_pred ccccEEEeec---------ccccccCCCCcc-cccccccccccccccCCCCccccc-cCCcCceeccc--c----ccccc
Q 047901 240 SQLHVLDLSS---------NHIAGEIPMELG-RLISLNKLILRGNQLSGHLPRALG-LLTELEYFDLS--S----NRLNN 302 (786)
Q Consensus 240 ~~L~~L~Ls~---------N~i~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~L~--~----N~l~~ 302 (786)
++|+.|+|++ |.+++.....+. .+++|+.|.+..|.++......+. .+++|+.|+++ + |.++.
T Consensus 338 ~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~ 417 (594)
T 2p1m_B 338 KDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTL 417 (594)
T ss_dssp TTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTC
T ss_pred CCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccC
Confidence 6777777733 344322222222 356677777777776644333333 46777777777 3 44543
Q ss_pred cch-----hhhhcccCCcEEEecccccCCCcchHHhh-hcCcCeeeccCCccCCCCCccc-ccccccceecccccccccc
Q 047901 303 SIL-----EALGFMFKLFYLNFSHNQFSQEIPEDLAL-LAHLSELDLSHNLFKGSIPSRI-CNLESLEKLNLSHNNISGQ 375 (786)
Q Consensus 303 ~~~-----~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~ 375 (786)
.+. ..+..+++|+.|+|++ .++......+.. +++|+.|+|++|.+++..+..+ .++++|+.|+|++|++++.
T Consensus 418 ~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~ 496 (594)
T 2p1m_B 418 EPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDK 496 (594)
T ss_dssp CCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHH
T ss_pred CchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHH
Confidence 221 1245566777777765 555444444444 6677777777777654433333 4567777777777777543
Q ss_pred CCc-ccccCCCceEEeccCCcc
Q 047901 376 IPA-CFIGMSGLLSIDISYNEL 396 (786)
Q Consensus 376 ~p~-~~~~l~~L~~L~l~~N~l 396 (786)
... ....+++|+.|++++|++
T Consensus 497 ~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 497 ALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp HHHHTGGGGGGSSEEEEESSCC
T ss_pred HHHHHHHhCCCCCEEeeeCCCC
Confidence 332 334467777777777766
No 325
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=1.4e-25 Score=231.85 Aligned_cols=201 Identities=23% Similarity=0.238 Sum_probs=115.0
Q ss_pred CCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEee
Q 047901 169 SLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLS 248 (786)
Q Consensus 169 ~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 248 (786)
..+.+++++|+++.++.. + .++|++|+|++|+|+++.+..|..+++|++|+|++|+++.+.+..|.++++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~~ip~~-~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLTAIPSN-I--PADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCSSCCSC-C--CTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCCccCCC-C--CCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 456677777777764432 2 2567777777777776666667777777777777777765555556666666666666
Q ss_pred cccccccCCCCcccccccccccccccccCCCCccccccCCcCceeccccccccccchhhhhcccCCcEEEecccccCCCc
Q 047901 249 SNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQEI 328 (786)
Q Consensus 249 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 328 (786)
+|++++..+..|..+++|+.|+|++|+++++.+..|..+++|+.|+|++|+++.+++..|..+++|++|+|++|+++...
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 173 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVP 173 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeC
Confidence 66666555555666666666666666666555555555555555555555555555444555555555555555544444
Q ss_pred chHHhhhcCcCeeeccCCccCCCCCcccccccccceeccccccc
Q 047901 329 PEDLALLAHLSELDLSHNLFKGSIPSRICNLESLEKLNLSHNNI 372 (786)
Q Consensus 329 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 372 (786)
+..|..+++|+.|+|++|++++..+..|..+++|+.|++++|++
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 217 (270)
T 2o6q_A 174 EGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPW 217 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred hhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCe
Confidence 44444444444444444444433333344444444444444444
No 326
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=1.8e-25 Score=231.17 Aligned_cols=204 Identities=21% Similarity=0.200 Sum_probs=171.1
Q ss_pred ccceeecccccccCCCCCcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccC
Q 047901 146 LLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSG 225 (786)
Q Consensus 146 ~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 225 (786)
..+.+++++|.++.++..+. ++++.|++++|+|+++.+..|..+++|++|+|++|+|+.+.+..|..+++|++|+|++
T Consensus 17 ~~~~l~~~~~~l~~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~ 94 (270)
T 2o6q_A 17 NKNSVDCSSKKLTAIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTD 94 (270)
T ss_dssp TTTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCS
T ss_pred CCCEEEccCCCCCccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCC
Confidence 34556666666665554444 5788888888888888888888888899999988888888888888888899999998
Q ss_pred cccCCCCCccccCCccccEEEeecccccccCCCCcccccccccccccccccCCCCccccccCCcCceeccccccccccch
Q 047901 226 NNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSIL 305 (786)
Q Consensus 226 N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 305 (786)
|+++++.+..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|+++++.+..|..+++|+.|+|++|+++.+++
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 174 (270)
T 2o6q_A 95 NKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPE 174 (270)
T ss_dssp SCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeCh
Confidence 88887777788888899999999998888888888888899999999999988887788888999999999999988888
Q ss_pred hhhhcccCCcEEEecccccCCCcchHHhhhcCcCeeeccCCccCCC
Q 047901 306 EALGFMFKLFYLNFSHNQFSQEIPEDLALLAHLSELDLSHNLFKGS 351 (786)
Q Consensus 306 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 351 (786)
..|..+++|++|+|++|++++..+..|..+++|+.|+|++|++...
T Consensus 175 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 175 GAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred hHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 8888889999999999999877777788899999999999988754
No 327
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.93 E-value=2.7e-25 Score=231.83 Aligned_cols=203 Identities=19% Similarity=0.167 Sum_probs=117.0
Q ss_pred ccCCCCCCEEeCCCccCcccCCCCCCCCCCcEEEccCCcCcccCchhhcccCCcceeccccccccccCChhhhccCccce
Q 047901 70 IGLLTHLFSLDLSLNQFSGTFPPICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEI 149 (786)
Q Consensus 70 ~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~ 149 (786)
++.+++|+++++++|+++.++..+. ++|++|+|++|+|+++.+..|.++++|++|+|++|+|++..+. ..+++
T Consensus 6 ~~~l~~l~~l~~~~~~l~~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~--- 78 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPV--- 78 (290)
T ss_dssp EECSTTCCEEECTTSCCSSCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTT---
T ss_pred ccccCCccEEECCCCCCCcCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCc---
Confidence 4556666666666666666655543 5677777777777766667777777777777777776643221 23333
Q ss_pred eecccccccCCCCCcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccC
Q 047901 150 LTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNIT 229 (786)
Q Consensus 150 L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 229 (786)
|+.|++++|+|+.+ +..+..+++|++|+|++|+|+++.+..|.++++|++|+|++|+|+
T Consensus 79 --------------------L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~ 137 (290)
T 1p9a_G 79 --------------------LGTLDLSHNQLQSL-PLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK 137 (290)
T ss_dssp --------------------CCEEECCSSCCSSC-CCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCC
T ss_pred --------------------CCEEECCCCcCCcC-chhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCC
Confidence 44444444444422 234445555555555555555555555555555555555555555
Q ss_pred CCCCccccCCccccEEEeecccccccCCCCcccccccccccccccccCCCCccccccCCcCceecccccccc
Q 047901 230 GRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLN 301 (786)
Q Consensus 230 ~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 301 (786)
++.+..|..+++|+.|+|++|+|+++.+..|.++++|+.|+|++|+|+.+ |..+..+.+|+.|+|++|++.
T Consensus 138 ~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~i-p~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 138 TLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTI-PKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCC-CTTTTTTCCCSEEECCSCCBC
T ss_pred ccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCcc-ChhhcccccCCeEEeCCCCcc
Confidence 55445555555566666666666555555555566666666666666533 333444556777777777665
No 328
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.93 E-value=6.3e-25 Score=229.01 Aligned_cols=203 Identities=22% Similarity=0.164 Sum_probs=127.9
Q ss_pred ccCCCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCCCCCCCCCCc
Q 047901 21 SFSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFPPICNLSNLK 100 (786)
Q Consensus 21 ~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~ 100 (786)
.+.++++++.+++++|+++.+++. +. +++++|+|++|+|+++.+..|..+++|++|+|++|+|++++.. ..+++|+
T Consensus 5 ~~~~l~~l~~l~~~~~~l~~ip~~-~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~l~~L~ 80 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLTALPPD-LP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD-GTLPVLG 80 (290)
T ss_dssp EEECSTTCCEEECTTSCCSSCCSC-CC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC-SCCTTCC
T ss_pred cccccCCccEEECCCCCCCcCCCC-CC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC-CCCCcCC
Confidence 466788888899988888755443 32 5788888888888888888888888888888888888876543 6777888
Q ss_pred EEEccCCcCcccCchhhcccCCcceeccccccccccCChhhhccCccceeecccccccCCCCCcCCCCCCcEEEccCccc
Q 047901 101 YISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNL 180 (786)
Q Consensus 101 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l 180 (786)
+|+|++|+|+ ..|..+.++++|++|+|++|+|++..+..| .++++|+.|+|++|+|
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~-----------------------~~l~~L~~L~L~~N~l 136 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGAL-----------------------RGLGELQELYLKGNEL 136 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTT-----------------------TTCTTCCEEECTTSCC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHH-----------------------cCCCCCCEEECCCCCC
Confidence 8888888877 344566666777777777666664333322 3334444444444444
Q ss_pred ccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccc
Q 047901 181 TGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHI 252 (786)
Q Consensus 181 ~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i 252 (786)
+++++..|..+++|++|+|++|+|+++.+..|..+++|+.|+|++|+|+ .+|..+..+.+|+.|+|++|.+
T Consensus 137 ~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~ 207 (290)
T 1p9a_G 137 KTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207 (290)
T ss_dssp CCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCB
T ss_pred CccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCc
Confidence 4444445555555555555555555555555555555555555555555 3344444444555555555544
No 329
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=8.9e-26 Score=233.61 Aligned_cols=207 Identities=21% Similarity=0.194 Sum_probs=129.3
Q ss_pred CCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEE
Q 047901 166 NCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVL 245 (786)
Q Consensus 166 ~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 245 (786)
.+++|+.|++.+|.++.+ ..+..+++|++|+|++|+++++ ..+..+++|++|+|++|.++++.+..|..+++|++|
T Consensus 39 ~l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 114 (272)
T 3rfs_A 39 ELNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKEL 114 (272)
T ss_dssp HHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred cccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEE
Confidence 344555555555555533 2355566666666666666543 245566666666666666665555556666666666
Q ss_pred EeecccccccCCCCcccccccccccccccccCCCCccccccCCcCceeccccccccccchhhhhcccCCcEEEecccccC
Q 047901 246 DLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFS 325 (786)
Q Consensus 246 ~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 325 (786)
+|++|++++..+..|.++++|+.|+|++|+++++.+..|..+++|+.|++++|+++.+++..|..+++|++|++++|+++
T Consensus 115 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 194 (272)
T 3rfs_A 115 VLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLK 194 (272)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred ECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCC
Confidence 66666666555555666666666666666666666656666666666666666666666666666666666666666666
Q ss_pred CCcchHHhhhcCcCeeeccCCccCCCCCcccccccccceeccccccccccCCcccccC
Q 047901 326 QEIPEDLALLAHLSELDLSHNLFKGSIPSRICNLESLEKLNLSHNNISGQIPACFIGM 383 (786)
Q Consensus 326 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 383 (786)
+..+..|..+++|+.|+|++|.+.+. +++|+.|++..|.++|.+|..+..+
T Consensus 195 ~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~ 245 (272)
T 3rfs_A 195 SVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSV 245 (272)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCB
T ss_pred ccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCccccc
Confidence 66666666677777777777766532 3456777777777777777665544
No 330
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=1.1e-25 Score=233.02 Aligned_cols=228 Identities=17% Similarity=0.175 Sum_probs=180.1
Q ss_pred CcceeccccccccccCChhhhccCccceeecccccccCCCCCcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccC
Q 047901 122 KLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSH 201 (786)
Q Consensus 122 ~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~ 201 (786)
++..+++.++.+... ..+..+++|+.|++++|.+.. ++.+..+++|+.|++++|+++++ ..+..+++|++|+|++
T Consensus 20 ~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~-~~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~ 94 (272)
T 3rfs_A 20 ETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKS-VQGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTG 94 (272)
T ss_dssp HHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCC-CTTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTT
T ss_pred HHHHHHhcCcccccc--cccccccceeeeeeCCCCccc-ccccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCC
Confidence 344555555555432 234455566666666666553 33466777888888888888764 4678888888888888
Q ss_pred CccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCCCCcccccccccccccccccCCCCc
Q 047901 202 NNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLP 281 (786)
Q Consensus 202 N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 281 (786)
|+++++.+..|..+++|++|+|++|+++++.+..|..+++|+.|+|++|++++..+..|..+++|+.|++++|+++++.+
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 174 (272)
T 3rfs_A 95 NQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPE 174 (272)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCH
Confidence 88888888888888888888888888887777778888888888888888887777778888889999999998888888
Q ss_pred cccccCCcCceeccccccccccchhhhhcccCCcEEEecccccCCCcchHHhhhcCcCeeeccCCccCCCCCcccccccc
Q 047901 282 RALGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQEIPEDLALLAHLSELDLSHNLFKGSIPSRICNLES 361 (786)
Q Consensus 282 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 361 (786)
..|..+++|+.|++++|+++++++..|..+++|++|++++|.+.+. +++|+.|+++.|.+++.+|..++.+..
T Consensus 175 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 175 GVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred HHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccccCC
Confidence 8888889999999999999888888888899999999999988754 457889999999999999988877655
No 331
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=2.9e-28 Score=282.22 Aligned_cols=391 Identities=18% Similarity=0.126 Sum_probs=281.4
Q ss_pred CeEEEEcCCCCCcccCCcCccCCCCCCcEEECCCC-Ccccc-CchhccCCCCCCEEeCcCCcccccCCcccc----CCCC
Q 047901 2 RVNSINLTSTGLKGTLQEFSFSSFPHLAYLDLSIN-GFFGT-LPPQVRNLSKLKYLDLSENELSGKIPPEIG----LLTH 75 (786)
Q Consensus 2 ~~~~l~l~~~~l~~~l~~~~f~~l~~L~~L~L~~n-~i~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~----~l~~ 75 (786)
+++.|+|+++.+.+.....-...+++|++|+|++| .++.. .+..+.++++|++|+|++|.+++..+..+. .+++
T Consensus 106 ~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~ 185 (594)
T 2p1m_B 106 WLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTS 185 (594)
T ss_dssp TCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCC
T ss_pred CCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCc
Confidence 57889999988765444322226899999999999 55432 455566899999999999999876555454 6779
Q ss_pred CCEEeCCCcc--Cccc-CCC-CCCCCCCcEEEccCC-cCcccCchhhcccCCcceecccc-------ccccccCChhhhc
Q 047901 76 LFSLDLSLNQ--FSGT-FPP-ICNLSNLKYISLHNN-KLSGSIPEEIGNLMKLSYLMLDT-------NQFTGQLPRNICR 143 (786)
Q Consensus 76 L~~L~Ls~N~--l~~~-~~~-~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~L~~-------N~l~~~~~~~~~~ 143 (786)
|++|+|++|. ++.. ... +..+++|++|+|++| .+.+ .+..+..+++|++|+++. |.+.+ ++..+.+
T Consensus 186 L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~ 263 (594)
T 2p1m_B 186 LVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALSG 263 (594)
T ss_dssp CCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHT
T ss_pred CcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHH-HHHHHhc
Confidence 9999999997 3210 111 235799999999999 4544 778889999999999554 44553 4457888
Q ss_pred cCcccee-ecccccccCCCCCcCCCCCCcEEEccCcccccccC-cccCCCCCCCEEeccCCcccccc-CcCccCCCCccE
Q 047901 144 SGLLEIL-TVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNIS-EDFGIYPNLKFLDLSHNNFYGEI-SSNWGKCHRLGT 220 (786)
Q Consensus 144 ~~~L~~L-~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~~f~~l~~L~~L~L~~N~i~~~~-~~~~~~l~~L~~ 220 (786)
+++|+.| .+.+......+..+..+++|+.|++++|.++.... ..+..+++|++|++++| +.... +.....+++|++
T Consensus 264 ~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~ 342 (594)
T 2p1m_B 264 CKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRE 342 (594)
T ss_dssp CTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCE
T ss_pred CCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCE
Confidence 8999998 44443332222234478999999999999775432 23568999999999998 44222 222335889999
Q ss_pred EEccC---------cccCCCCCccc-cCCccccEEEeecccccccCCCCcc-ccccccccccc--c----cccCCCCc--
Q 047901 221 LIVSG---------NNITGRIPPEI-GNSSQLHVLDLSSNHIAGEIPMELG-RLISLNKLILR--G----NQLSGHLP-- 281 (786)
Q Consensus 221 L~L~~---------N~l~~~~~~~~-~~l~~L~~L~Ls~N~i~~~~~~~~~-~l~~L~~L~L~--~----N~l~~~~~-- 281 (786)
|++++ +.+++.....+ .++++|+.|+++.|.+++.....+. .+++|+.|+++ + |.++....
T Consensus 343 L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~ 422 (594)
T 2p1m_B 343 LRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDI 422 (594)
T ss_dssp EEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHH
T ss_pred EEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhh
Confidence 99944 45553222223 3478999999999999866555554 58899999999 4 56663322
Q ss_pred ---cccccCCcCceeccccccccccchhhhhc-ccCCcEEEecccccCCCcchHH-hhhcCcCeeeccCCccCCCCCc-c
Q 047901 282 ---RALGLLTELEYFDLSSNRLNNSILEALGF-MFKLFYLNFSHNQFSQEIPEDL-ALLAHLSELDLSHNLFKGSIPS-R 355 (786)
Q Consensus 282 ---~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~-~ 355 (786)
..+..+++|+.|++++ .++......+.. +++|+.|+|++|.+++.....+ ..+++|+.|+|++|.+++.... .
T Consensus 423 ~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~ 501 (594)
T 2p1m_B 423 GFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLAN 501 (594)
T ss_dssp HHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHT
T ss_pred HHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHH
Confidence 2367789999999987 676655555555 8899999999999976555555 6789999999999999644333 4
Q ss_pred cccccccceeccccccccccCCccc-ccCCCceEEeccCCcc
Q 047901 356 ICNLESLEKLNLSHNNISGQIPACF-IGMSGLLSIDISYNEL 396 (786)
Q Consensus 356 ~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~l~~N~l 396 (786)
...+++|+.|++++|+++..-...+ ..++.|+...+..+.-
T Consensus 502 ~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~ 543 (594)
T 2p1m_B 502 ASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGA 543 (594)
T ss_dssp GGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSSC
T ss_pred HHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCCc
Confidence 4568999999999999964433334 5578887776666643
No 332
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.92 E-value=4.1e-25 Score=224.03 Aligned_cols=199 Identities=15% Similarity=0.136 Sum_probs=96.8
Q ss_pred CCcEEEccCcccccccCcccCCCCCCCEEeccCCc-cccccCcCccCCCCccEEEccC-cccCCCCCccccCCccccEEE
Q 047901 169 SLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNN-FYGEISSNWGKCHRLGTLIVSG-NNITGRIPPEIGNSSQLHVLD 246 (786)
Q Consensus 169 ~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~-i~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~ 246 (786)
+|+.|++++|+|+++.+..|..+++|++|+|++|+ ++.+.+.+|.++++|++|+|++ |+++++.+..|.++++|+.|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 45555555555555555555555555555555554 5555544555555555555554 555544444455555555555
Q ss_pred eecccccccCCCCcccccccccccccccccCCCCccccccCCcCceeccccc-cccccchhhhhcccCCc-EEEeccccc
Q 047901 247 LSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSN-RLNNSILEALGFMFKLF-YLNFSHNQF 324 (786)
Q Consensus 247 Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~-~L~L~~N~l 324 (786)
+++|++++ +|. |..+++|+ .|+.|++++| .++.+++..|..+++|+ +|++++|++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~---------------------~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l 168 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTD---------------------IFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGF 168 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCC---------------------SEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCC
T ss_pred CCCCCCcc-ccc-cccccccc---------------------cccEEECCCCcchhhcCcccccchhcceeEEEcCCCCC
Confidence 55555543 222 44444444 0004444444 44444444444444444 455555544
Q ss_pred CCCcchHHhhhcCcCeeeccCCc-cCCCCCcccccc-cccceeccccccccccCCcccccCCCceEEeccCC
Q 047901 325 SQEIPEDLALLAHLSELDLSHNL-FKGSIPSRICNL-ESLEKLNLSHNNISGQIPACFIGMSGLLSIDISYN 394 (786)
Q Consensus 325 ~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 394 (786)
+.+.+..|.. ++|+.|+|++|+ +++..+..|.++ ++|+.|++++|+|+++.+. .+++|+.|+++++
T Consensus 169 ~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 169 TSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp CEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred cccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 4333333333 455555555553 554444455555 5555555555555543332 3445555555544
No 333
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=1.2e-25 Score=254.07 Aligned_cols=187 Identities=15% Similarity=0.215 Sum_probs=146.1
Q ss_pred ccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCc----hhhHHHHHHHHHHHhhcCCCcccceeeEEecCCeeeEE
Q 047901 509 DAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQ----MSDQKEFLNEIKALTKIRHRNIVKFYGFCSHVRHSFVV 584 (786)
Q Consensus 509 ~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~----~~~~~~~~~e~~~l~~l~hpniv~l~~~~~~~~~~~lv 584 (786)
...+.||+|+||+||+|+. .++.+++|+......... ....+.+.+|++++++++||||+++..++...+..|+|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3456899999999999965 478899998755322111 11245689999999999999999777777677788999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecCC
Q 047901 585 YEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKP 664 (786)
Q Consensus 585 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~ 664 (786)
|||+++++|.+++.. +..++.|++.||+|||++ +|+||||||+|||++. .+||+|||+|+....
T Consensus 418 mE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 418 MSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp EECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred EECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 999999999999864 457999999999999999 9999999999999998 999999999998864
Q ss_pred CCCc-------ceeeccCccccCCCCCCCCchHHHHhhh--cCcCcccchHHHHHHHHHHHhCCCCC
Q 047901 665 NSSN-------WTELVGTFGYVAPAHGNIGLHLAELAYT--MKITEKCDVYSFGVLALEVIKGKHPG 722 (786)
Q Consensus 665 ~~~~-------~~~~~gt~~y~aPE~~~~~~~~~e~~~~--~~~~~~sDvwslGvil~elltg~~Pf 722 (786)
.... .....||+.|||| |++.. ..|+.++|+||..+-..+-+.++.+|
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~AP----------Ev~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFD----------EIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHH----------HHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred ccccccchhhhhhhhcCCCCcCCH----------HHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 3221 1356899999999 66655 56788899999999888888887775
No 334
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.91 E-value=1.6e-24 Score=219.77 Aligned_cols=193 Identities=16% Similarity=0.116 Sum_probs=140.7
Q ss_pred CCCCEEeccCCccccccCcCccCCCCccEEEccCcc-cCCCCCccccCCccccEEEeec-ccccccCCCCcccccccccc
Q 047901 192 PNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNN-ITGRIPPEIGNSSQLHVLDLSS-NHIAGEIPMELGRLISLNKL 269 (786)
Q Consensus 192 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~-N~i~~~~~~~~~~l~~L~~L 269 (786)
++|++|+|++|+|+++.+..|.++++|++|++++|+ ++.+.+..|.++++|+.|+|++ |+++++.+..|.++++|+.|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 367777777777777666667777777777777775 6655555666666666666666 66665555555555555555
Q ss_pred cccccccCCCCccccccCCcCceeccccccccccchhhhhcccCCc---EEEeccc-ccCCCcchHHhhhcCcC-eeecc
Q 047901 270 ILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSILEALGFMFKLF---YLNFSHN-QFSQEIPEDLALLAHLS-ELDLS 344 (786)
Q Consensus 270 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~---~L~L~~N-~l~~~~~~~~~~l~~L~-~L~L~ 344 (786)
++++|+++ .++. |..+++|+ +|++++| .++...+..|..+++|+ .|+++
T Consensus 111 ~l~~n~l~------------------------~lp~--~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~ 164 (239)
T 2xwt_C 111 GIFNTGLK------------------------MFPD--LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLY 164 (239)
T ss_dssp EEEEECCC------------------------SCCC--CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECC
T ss_pred eCCCCCCc------------------------cccc--cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcC
Confidence 55555554 3222 44455555 9999999 99988888899999999 99999
Q ss_pred CCccCCCCCcccccccccceecccccc-ccccCCcccccC-CCceEEeccCCcccccCCCCCccccCCCcc
Q 047901 345 HNLFKGSIPSRICNLESLEKLNLSHNN-ISGQIPACFIGM-SGLLSIDISYNELRGPIPNSTVFRNAPRES 413 (786)
Q Consensus 345 ~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l-~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~ 413 (786)
+|+++...+..|.. ++|+.|++++|+ ++++.+..|.++ ++|+.|++++|++++.++. .+.......
T Consensus 165 ~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~--~~~~L~~L~ 232 (239)
T 2xwt_C 165 NNGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK--GLEHLKELI 232 (239)
T ss_dssp SCCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT--TCTTCSEEE
T ss_pred CCCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh--HhccCceee
Confidence 99999544555555 899999999995 998888999999 9999999999999975544 345444333
No 335
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.91 E-value=3.7e-24 Score=230.00 Aligned_cols=242 Identities=16% Similarity=0.132 Sum_probs=193.6
Q ss_pred ceeecccccccCCCCCcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCcccc-ccCcCccCCCCccE-EEccC
Q 047901 148 EILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYG-EISSNWGKCHRLGT-LIVSG 225 (786)
Q Consensus 148 ~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~-~~~~~~~~l~~L~~-L~L~~ 225 (786)
+.++.++++++.+|.++. +++++|+|++|+|+.+.+++|.++++|++|+|++|++.+ +.+.+|.+++++.+ +++++
T Consensus 12 ~~v~C~~~~Lt~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 12 RVFLCQESKVTEIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp TEEEEESTTCCSCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred CEEEecCCCCCccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 456777777777766663 678899999999999888899999999999999999855 55678899988775 66777
Q ss_pred cccCCCCCccccCCccccEEEeecccccccCCCCcccccccccccccc-cccCCCCccccccCC-cCceecccccccccc
Q 047901 226 NNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRG-NQLSGHLPRALGLLT-ELEYFDLSSNRLNNS 303 (786)
Q Consensus 226 N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~ 303 (786)
|+|+.+.|..|.++++|+.|++++|+|+...+..+....++..|++.+ |++..+.+..|..+. .++.|+|++|+|+.+
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i 169 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEI 169 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEE
T ss_pred CcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCC
Confidence 999988888999999999999999999877777888888888888855 678877777887775 588899999999988
Q ss_pred chhhhhcccCCcEEEecc-cccCCCcchHHhhhcCcCeeeccCCccCCCCCcccccccccceeccccccccccCCccccc
Q 047901 304 ILEALGFMFKLFYLNFSH-NQFSQEIPEDLALLAHLSELDLSHNLFKGSIPSRICNLESLEKLNLSHNNISGQIPACFIG 382 (786)
Q Consensus 304 ~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 382 (786)
+...|.. .+|+.|++++ |.++.+.+..|..+++|+.|+|++|+|+...+..|.++.+|+.+++ ++++ .+| .+..
T Consensus 170 ~~~~f~~-~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l~-~lP-~l~~ 244 (350)
T 4ay9_X 170 HNSAFNG-TQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLK-KLP-TLEK 244 (350)
T ss_dssp CTTSSTT-EEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC--TTCC-CCC-CTTT
T ss_pred Chhhccc-cchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccC--CCcC-cCC-Cchh
Confidence 8887764 5788899874 7777666678899999999999999999666666776666666555 3343 455 3778
Q ss_pred CCCceEEeccCCcc
Q 047901 383 MSGLLSIDISYNEL 396 (786)
Q Consensus 383 l~~L~~L~l~~N~l 396 (786)
+++|+.++++++.-
T Consensus 245 l~~L~~l~l~~~~~ 258 (350)
T 4ay9_X 245 LVALMEASLTYPSH 258 (350)
T ss_dssp CCSCCEEECSCHHH
T ss_pred CcChhhCcCCCCcc
Confidence 88999998876543
No 336
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.91 E-value=1.1e-25 Score=243.07 Aligned_cols=128 Identities=23% Similarity=0.217 Sum_probs=65.8
Q ss_pred EEcCCCCCcccCCcCccCCCCCCcEEECCCCCccccCc----hhccCCC-CCCEEeCcCCcccccCCccccCC-----CC
Q 047901 6 INLTSTGLKGTLQEFSFSSFPHLAYLDLSINGFFGTLP----PQVRNLS-KLKYLDLSENELSGKIPPEIGLL-----TH 75 (786)
Q Consensus 6 l~l~~~~l~~~l~~~~f~~l~~L~~L~L~~n~i~~~~~----~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l-----~~ 75 (786)
.+|+.+++.+.+++ .+...++|++|||++|.+++..+ ..|.+++ +|++|+|++|+|+...+..|..+ ++
T Consensus 3 ~~ls~n~~~~~~~~-~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 3 YKLTLHPGSNPVEE-FTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EECCCCTTCCHHHH-HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred cccccccchHHHHH-HHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 35555666555554 12333336666666666655554 5555555 56666666666655555555443 55
Q ss_pred CCEEeCCCccCcccCCC-----CCCC-CCCcEEEccCCcCcccCchhhcc-----cCCcceecccccccc
Q 047901 76 LFSLDLSLNQFSGTFPP-----ICNL-SNLKYISLHNNKLSGSIPEEIGN-----LMKLSYLMLDTNQFT 134 (786)
Q Consensus 76 L~~L~Ls~N~l~~~~~~-----~~~l-~~L~~L~L~~N~l~~~~~~~~~~-----l~~L~~L~L~~N~l~ 134 (786)
|++|+|++|++++.... +..+ ++|++|+|++|+|++..+..|.. .++|++|+|++|+++
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~ 151 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLG 151 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGG
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCC
Confidence 55555555555543321 2223 45555555555555444433322 135555555555554
No 337
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.91 E-value=4.6e-25 Score=238.35 Aligned_cols=250 Identities=16% Similarity=0.126 Sum_probs=202.9
Q ss_pred EEECCCCCccccCchhccCCCCCCEEeCcCCcccccCC----ccccCCC-CCCEEeCCCccCcccCC-CCCCC-----CC
Q 047901 30 YLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIP----PEIGLLT-HLFSLDLSLNQFSGTFP-PICNL-----SN 98 (786)
Q Consensus 30 ~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~----~~~~~l~-~L~~L~Ls~N~l~~~~~-~~~~l-----~~ 98 (786)
+++|++|.+++..|..+...++|++|+|++|+|+...+ .+|..++ +|++|+|++|+|++... .+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 57899999998888888888889999999999997777 7888999 99999999999987543 24443 89
Q ss_pred CcEEEccCCcCcccCchhhccc-----CCcceeccccccccccCChhhhc-----cCccceeecccccccCCCC-----C
Q 047901 99 LKYISLHNNKLSGSIPEEIGNL-----MKLSYLMLDTNQFTGQLPRNICR-----SGLLEILTVNDNHFLGSIP-----N 163 (786)
Q Consensus 99 L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~~~~-----~~~L~~L~l~~N~l~~~~~-----~ 163 (786)
|++|+|++|++++..+..+... ++|++|+|++|++++..+..++. .++|+.|+|++|.+..... .
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 9999999999998887765544 89999999999999777766655 3699999999999985322 2
Q ss_pred cCCCC-CCcEEEccCcccccccCccc----CCC-CCCCEEeccCCcccccc----CcCccC-CCCccEEEccCcccCCCC
Q 047901 164 LRNCR-SLVRAHLGRNNLTGNISEDF----GIY-PNLKFLDLSHNNFYGEI----SSNWGK-CHRLGTLIVSGNNITGRI 232 (786)
Q Consensus 164 l~~l~-~L~~L~L~~N~l~~~~~~~f----~~l-~~L~~L~L~~N~i~~~~----~~~~~~-l~~L~~L~L~~N~l~~~~ 232 (786)
+..++ +|+.|+|++|+|++..+..+ ... ++|++|+|++|+|+... +..+.. .++|++|+|++|+|++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 34454 99999999999998776544 445 59999999999998732 334444 459999999999999754
Q ss_pred C----ccccCCccccEEEeeccccccc-------CCCCcccccccccccccccccCCC
Q 047901 233 P----PEIGNSSQLHVLDLSSNHIAGE-------IPMELGRLISLNKLILRGNQLSGH 279 (786)
Q Consensus 233 ~----~~~~~l~~L~~L~Ls~N~i~~~-------~~~~~~~l~~L~~L~L~~N~l~~~ 279 (786)
+ ..+..+++|+.|+|++|.+.++ ++..+..+++|+.|++++|.+...
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 4 3457789999999999995533 334678899999999999999855
No 338
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.91 E-value=1.4e-24 Score=229.30 Aligned_cols=225 Identities=16% Similarity=0.152 Sum_probs=174.4
Q ss_pred CCcEEEccCcccccccC---cccCCCCCCCEEeccCCccccccCcCc--cCCCCccEEEccCcccCCCCC----ccccCC
Q 047901 169 SLVRAHLGRNNLTGNIS---EDFGIYPNLKFLDLSHNNFYGEISSNW--GKCHRLGTLIVSGNNITGRIP----PEIGNS 239 (786)
Q Consensus 169 ~L~~L~L~~N~l~~~~~---~~f~~l~~L~~L~L~~N~i~~~~~~~~--~~l~~L~~L~L~~N~l~~~~~----~~~~~l 239 (786)
.++.+.+.++.++.... ..+..+++|++|+|++|++.+..|..+ ..+++|++|+|++|++++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 45666666666543211 112234678888888888888888877 888888888888888886544 344568
Q ss_pred ccccEEEeecccccccCCCCcccccccccccccccccCC---CC-ccccccCCcCceeccccccccccchh---hhhccc
Q 047901 240 SQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSG---HL-PRALGLLTELEYFDLSSNRLNNSILE---ALGFMF 312 (786)
Q Consensus 240 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~---~~-~~~~~~l~~L~~L~L~~N~l~~~~~~---~~~~l~ 312 (786)
++|+.|+|++|++.+..+..|..+++|++|+|++|++.+ .. +..+..+++|++|+|++|+++.+... .+..++
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~ 224 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGV 224 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTC
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCC
Confidence 889999999999988888888889999999999998764 22 23346788999999999999765443 457789
Q ss_pred CCcEEEecccccCCCcchHHhhh---cCcCeeeccCCccCCCCCcccccccccceeccccccccccCCcccccCCCceEE
Q 047901 313 KLFYLNFSHNQFSQEIPEDLALL---AHLSELDLSHNLFKGSIPSRICNLESLEKLNLSHNNISGQIPACFIGMSGLLSI 389 (786)
Q Consensus 313 ~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 389 (786)
+|++|+|++|++++..|..+..+ ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|+.|
T Consensus 225 ~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L 299 (310)
T 4glp_A 225 QPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNL 299 (310)
T ss_dssp CCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCE
T ss_pred CCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEE
Confidence 99999999999998777776666 69999999999999 5666664 7999999999999875 33 6788999999
Q ss_pred eccCCcccc
Q 047901 390 DISYNELRG 398 (786)
Q Consensus 390 ~l~~N~l~~ 398 (786)
++++|+++.
T Consensus 300 ~L~~N~l~~ 308 (310)
T 4glp_A 300 TLDGNPFLV 308 (310)
T ss_dssp ECSSTTTSC
T ss_pred ECcCCCCCC
Confidence 999999864
No 339
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.91 E-value=6e-24 Score=223.85 Aligned_cols=194 Identities=22% Similarity=0.318 Sum_probs=120.7
Q ss_pred CCCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCCCCCCCCCCcEE
Q 047901 23 SSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFPPICNLSNLKYI 102 (786)
Q Consensus 23 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L 102 (786)
..+++|++|++++|.++.+ + .+..+++|++|+|++|+|+.+.+ |..+++|++|+|++|++++. +.+..+++|++|
T Consensus 38 ~~l~~L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L 112 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV-SAIAGLQSIKTL 112 (308)
T ss_dssp HHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC-GGGTTCTTCCEE
T ss_pred HHcCCcCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc-hhhcCCCCCCEE
Confidence 3455566666666655433 2 35555666666666666654333 55556666666666655543 235555555555
Q ss_pred EccCCcCcccCchhhcccCCcceeccccccccccCChhhhccCccceeecccccccCCCCCcCCCCCCcEEEccCccccc
Q 047901 103 SLHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTG 182 (786)
Q Consensus 103 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~ 182 (786)
+|++|+++++.+ |..+++|++|++++|+++ +..+ +.++++|+.|++++|++++
T Consensus 113 ~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~------------------------~~~~-l~~l~~L~~L~l~~n~l~~ 165 (308)
T 1h6u_A 113 DLTSTQITDVTP--LAGLSNLQVLYLDLNQIT------------------------NISP-LAGLTNLQYLSIGNAQVSD 165 (308)
T ss_dssp ECTTSCCCCCGG--GTTCTTCCEEECCSSCCC------------------------CCGG-GGGCTTCCEEECCSSCCCC
T ss_pred ECCCCCCCCchh--hcCCCCCCEEECCCCccC------------------------cCcc-ccCCCCccEEEccCCcCCC
Confidence 555555554322 555555555555555554 3322 4556666677777777766
Q ss_pred ccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccc
Q 047901 183 NISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAG 254 (786)
Q Consensus 183 ~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~ 254 (786)
+.+ +..+++|++|+|++|+++++.+ +..+++|+.|+|++|++++.. .+..+++|+.|+|++|++++
T Consensus 166 ~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 166 LTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred Chh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec
Confidence 544 7777788888888888776654 777788888888888887554 37778888888888888874
No 340
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.90 E-value=8.1e-24 Score=222.85 Aligned_cols=213 Identities=20% Similarity=0.245 Sum_probs=163.0
Q ss_pred CcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCCCCCCCCCCcEEEccCC
Q 047901 28 LAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFPPICNLSNLKYISLHNN 107 (786)
Q Consensus 28 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N 107 (786)
+..+.+..+.+++..+ +..+++|++|++++|+++.+ + .+..+++|++|+|++|+++++++ +..+++|++|+|++|
T Consensus 21 ~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~~~~-~~~l~~L~~L~L~~n 95 (308)
T 1h6u_A 21 AIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAP-LKNLTKITELELSGN 95 (308)
T ss_dssp HHHHHTTCSSTTSEEC--HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG-GTTCCSCCEEECCSC
T ss_pred HHHHHhCCCCcCceec--HHHcCCcCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCCChh-HccCCCCCEEEccCC
Confidence 3344555555544332 44566777777777777643 3 46777777777777777776555 667777777777777
Q ss_pred cCcccCchhhcccCCcceeccccccccccCChhhhccCccceeecccccccCCCCCcCCCCCCcEEEccCcccccccCcc
Q 047901 108 KLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNISED 187 (786)
Q Consensus 108 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~ 187 (786)
+++++ ..|..+++|++|++++|+++ +. +.+..+++|+.|++++|+++++.+
T Consensus 96 ~l~~~--~~~~~l~~L~~L~l~~n~l~------------------------~~-~~l~~l~~L~~L~l~~n~l~~~~~-- 146 (308)
T 1h6u_A 96 PLKNV--SAIAGLQSIKTLDLTSTQIT------------------------DV-TPLAGLSNLQVLYLDLNQITNISP-- 146 (308)
T ss_dssp CCSCC--GGGTTCTTCCEEECTTSCCC------------------------CC-GGGTTCTTCCEEECCSSCCCCCGG--
T ss_pred cCCCc--hhhcCCCCCCEEECCCCCCC------------------------Cc-hhhcCCCCCCEEECCCCccCcCcc--
Confidence 77654 24666666666666666665 22 236678899999999999998755
Q ss_pred cCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCCCCcccccccc
Q 047901 188 FGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLN 267 (786)
Q Consensus 188 f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~ 267 (786)
+..+++|++|+|++|+++++.+ +..+++|+.|+|++|+++++.+ +..+++|+.|+|++|++++.. .+..+++|+
T Consensus 147 l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~ 220 (308)
T 1h6u_A 147 LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLF 220 (308)
T ss_dssp GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCC
T ss_pred ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCC
Confidence 8999999999999999998765 8999999999999999997643 889999999999999999665 389999999
Q ss_pred cccccccccCCCC
Q 047901 268 KLILRGNQLSGHL 280 (786)
Q Consensus 268 ~L~L~~N~l~~~~ 280 (786)
.|+|++|++++..
T Consensus 221 ~L~l~~N~i~~~~ 233 (308)
T 1h6u_A 221 IVTLTNQTITNQP 233 (308)
T ss_dssp EEEEEEEEEECCC
T ss_pred EEEccCCeeecCC
Confidence 9999999998643
No 341
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.90 E-value=5.8e-24 Score=228.46 Aligned_cols=239 Identities=18% Similarity=0.111 Sum_probs=142.1
Q ss_pred cEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCccc-CC-CCCCCCCCcE-EEcc
Q 047901 29 AYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGT-FP-PICNLSNLKY-ISLH 105 (786)
Q Consensus 29 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~-~~~~l~~L~~-L~L~ 105 (786)
+.++.++|+++.+ |..+ .+++++|+|++|+|+.+.+++|.++++|++|+|++|++.+. ++ .|.++++|++ +.++
T Consensus 12 ~~v~C~~~~Lt~i-P~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVTEI-PSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCCSC-CTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCCcc-CcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 4455566666433 3323 23566666666666655555666666666666666665432 22 2555655543 4455
Q ss_pred CCcCcccCchhhcccCCcceeccccccccccCChhhhccCccceeeccc-ccccCCCCC-cCCC-CCCcEEEccCccccc
Q 047901 106 NNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVND-NHFLGSIPN-LRNC-RSLVRAHLGRNNLTG 182 (786)
Q Consensus 106 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~-N~l~~~~~~-l~~l-~~L~~L~L~~N~l~~ 182 (786)
+|+|+.+.++.|.++++|++|++++|+++...+..+.....+..|++.+ |++..+++. +..+ ..++.|+|++|+|+.
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~ 168 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE 168 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC
Confidence 5666666666666666666666666666655555555555666666644 344444332 4444 356677777777777
Q ss_pred ccCcccCCCCCCCEEeccC-CccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCCCCcc
Q 047901 183 NISEDFGIYPNLKFLDLSH-NNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELG 261 (786)
Q Consensus 183 ~~~~~f~~l~~L~~L~L~~-N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~ 261 (786)
+.+..|.. .+|++|++++ |.++.+.+++|.++++|++|+|++|+|+.+.+..|.++++|+.+++ +.++ ..| .+.
T Consensus 169 i~~~~f~~-~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l~-~lP-~l~ 243 (350)
T 4ay9_X 169 IHNSAFNG-TQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLK-KLP-TLE 243 (350)
T ss_dssp ECTTSSTT-EEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC--TTCC-CCC-CTT
T ss_pred CChhhccc-cchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccC--CCcC-cCC-Cch
Confidence 76666643 5677777764 6677776777777777888888877777655545544444433332 2333 444 367
Q ss_pred cccccccccccccc
Q 047901 262 RLISLNKLILRGNQ 275 (786)
Q Consensus 262 ~l~~L~~L~L~~N~ 275 (786)
++++|+.++++++.
T Consensus 244 ~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 244 KLVALMEASLTYPS 257 (350)
T ss_dssp TCCSCCEEECSCHH
T ss_pred hCcChhhCcCCCCc
Confidence 77777777776554
No 342
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=1.8e-23 Score=213.51 Aligned_cols=178 Identities=22% Similarity=0.198 Sum_probs=103.6
Q ss_pred CCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEee
Q 047901 169 SLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLS 248 (786)
Q Consensus 169 ~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 248 (786)
+.+.++++++.++.++.... ++|++|+|++|+++++.+..|..+++|++|+|++|+|+++.+..|..+++|+.|+|+
T Consensus 15 ~~~~l~~~~~~l~~~p~~~~---~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLDSVPSGIP---ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCSSCCSCCC---TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCccccCCCCC---CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 45566777777765543222 466667777777666666666666666666666666666655566666666666666
Q ss_pred cccccccCCCCcccccccccccccccccCCCCccccccCCcCceeccccccccccchhhhhcccCCcEEEecccccCCCc
Q 047901 249 SNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQEI 328 (786)
Q Consensus 249 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 328 (786)
+|+|++..+..|..+++|++|+|++|+|+++.+..|..+++|+.|+|++|+++.+++..|..+++|++|+|++|++++..
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 171 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVP 171 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccC
Confidence 66666555555556666666666666665555555555555555555555555555444555555555555555554444
Q ss_pred chHHhhhcCcCeeeccCCccC
Q 047901 329 PEDLALLAHLSELDLSHNLFK 349 (786)
Q Consensus 329 ~~~~~~l~~L~~L~L~~N~l~ 349 (786)
+..|..+++|+.|+|++|+++
T Consensus 172 ~~~~~~l~~L~~L~l~~N~~~ 192 (251)
T 3m19_A 172 HGAFDRLGKLQTITLFGNQFD 192 (251)
T ss_dssp TTTTTTCTTCCEEECCSCCBC
T ss_pred HHHHhCCCCCCEEEeeCCcee
Confidence 444444444444444444444
No 343
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=7.1e-23 Score=209.13 Aligned_cols=180 Identities=22% Similarity=0.202 Sum_probs=158.8
Q ss_pred ccceeecccccccCCCCCcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccC
Q 047901 146 LLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSG 225 (786)
Q Consensus 146 ~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 225 (786)
..+.++++++.++.++..+. ++++.|+|++|+|+++.+..|..+++|++|+|++|+|+++.+..|..+++|++|+|++
T Consensus 15 ~~~~l~~~~~~l~~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 92 (251)
T 3m19_A 15 GKKEVDCQGKSLDSVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLAN 92 (251)
T ss_dssp GGTEEECTTCCCSSCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CCeEEecCCCCccccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCC
Confidence 45566677776666665555 5788999999999988888899999999999999999998888899999999999999
Q ss_pred cccCCCCCccccCCccccEEEeecccccccCCCCcccccccccccccccccCCCCccccccCCcCceeccccccccccch
Q 047901 226 NNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSIL 305 (786)
Q Consensus 226 N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 305 (786)
|+++++.+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+++.+..|..+++|+.|+|++|+++.+++
T Consensus 93 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 172 (251)
T 3m19_A 93 NQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPH 172 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCH
Confidence 99998888888999999999999999998878888999999999999999998888889999999999999999999998
Q ss_pred hhhhcccCCcEEEecccccCCC
Q 047901 306 EALGFMFKLFYLNFSHNQFSQE 327 (786)
Q Consensus 306 ~~~~~l~~L~~L~L~~N~l~~~ 327 (786)
..|..+++|++|+|++|.++..
T Consensus 173 ~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 173 GAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTTTCTTCCEEECCSCCBCTT
T ss_pred HHHhCCCCCCEEEeeCCceeCC
Confidence 8999999999999999999865
No 344
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=1.3e-23 Score=221.94 Aligned_cols=223 Identities=17% Similarity=0.158 Sum_probs=179.0
Q ss_pred CeEEEEcCCCCCcccC-C-cCccCCCCCCcEEECCCCCccccCchhc--cCCCCCCEEeCcCCcccccCC----ccccCC
Q 047901 2 RVNSINLTSTGLKGTL-Q-EFSFSSFPHLAYLDLSINGFFGTLPPQV--RNLSKLKYLDLSENELSGKIP----PEIGLL 73 (786)
Q Consensus 2 ~~~~l~l~~~~l~~~l-~-~~~f~~l~~L~~L~L~~n~i~~~~~~~~--~~l~~L~~L~L~~N~l~~~~~----~~~~~l 73 (786)
+++.+.+..+.+...- . -..+..+++|++|+|++|.+++..|..+ ..+++|++|+|++|+|++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 3567777777664210 0 0113345779999999999999999888 899999999999999987544 445679
Q ss_pred CCCCEEeCCCccCcccCC-CCCCCCCCcEEEccCCcCcc---cC-chhhcccCCcceeccccccccccCCh----hhhcc
Q 047901 74 THLFSLDLSLNQFSGTFP-PICNLSNLKYISLHNNKLSG---SI-PEEIGNLMKLSYLMLDTNQFTGQLPR----NICRS 144 (786)
Q Consensus 74 ~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~---~~-~~~~~~l~~L~~L~L~~N~l~~~~~~----~~~~~ 144 (786)
++|++|+|++|++++.++ .+..+++|++|+|++|++.+ +. +..+..+++|++|+|++|+++. ++. .+..+
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcC
Confidence 999999999999988776 48899999999999999864 22 2345789999999999999973 333 35778
Q ss_pred CccceeecccccccCC-CCCcCCC---CCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccE
Q 047901 145 GLLEILTVNDNHFLGS-IPNLRNC---RSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGT 220 (786)
Q Consensus 145 ~~L~~L~l~~N~l~~~-~~~l~~l---~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 220 (786)
++|+.|+|++|++.+. ++.+..+ ++|+.|+|++|+|+.++. .+. ++|++|+|++|+|+++ |. +..+++|+.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~lp~-~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~ 298 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPK-GLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDN 298 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCSCCS-CCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCchhh-hhc--CCCCEEECCCCcCCCC-ch-hhhCCCccE
Confidence 9999999999999987 4455555 799999999999997644 342 8999999999999976 32 788999999
Q ss_pred EEccCcccCC
Q 047901 221 LIVSGNNITG 230 (786)
Q Consensus 221 L~L~~N~l~~ 230 (786)
|+|++|++++
T Consensus 299 L~L~~N~l~~ 308 (310)
T 4glp_A 299 LTLDGNPFLV 308 (310)
T ss_dssp EECSSTTTSC
T ss_pred EECcCCCCCC
Confidence 9999999974
No 345
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=8.6e-25 Score=233.92 Aligned_cols=101 Identities=16% Similarity=0.217 Sum_probs=49.9
Q ss_pred CCEEeCcCCcccccCCccccCC--CCCCEEeCCCccCcccCCCCCCCCCCcEEEccCCcCccc-CchhhcccCCcceecc
Q 047901 52 LKYLDLSENELSGKIPPEIGLL--THLFSLDLSLNQFSGTFPPICNLSNLKYISLHNNKLSGS-IPEEIGNLMKLSYLML 128 (786)
Q Consensus 52 L~~L~L~~N~l~~~~~~~~~~l--~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L 128 (786)
++.|++++|.+. +..+..+ ++++.|++++|.+++..+.+..+++|++|+|++|.+++. .+..+..+++|++|+|
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L 125 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSL 125 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEEC
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeC
Confidence 455555555443 2334444 555555555555555444444555555555555555433 4444555555555555
Q ss_pred ccccccccCChhhhccCccceeecccc
Q 047901 129 DTNQFTGQLPRNICRSGLLEILTVNDN 155 (786)
Q Consensus 129 ~~N~l~~~~~~~~~~~~~L~~L~l~~N 155 (786)
++|++++..+..+..+++|+.|++++|
T Consensus 126 ~~~~l~~~~~~~l~~~~~L~~L~L~~~ 152 (336)
T 2ast_B 126 EGLRLSDPIVNTLAKNSNLVRLNLSGC 152 (336)
T ss_dssp TTCBCCHHHHHHHTTCTTCSEEECTTC
T ss_pred cCcccCHHHHHHHhcCCCCCEEECCCC
Confidence 555555444444444444444444433
No 346
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=1.7e-25 Score=244.21 Aligned_cols=258 Identities=19% Similarity=0.163 Sum_probs=129.5
Q ss_pred CCEEeCcCCcccccCCccccCCCCCCEEeCCCccCccc-----CCCCCCCCCCcEEEccCCcCc---ccCchhh------
Q 047901 52 LKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGT-----FPPICNLSNLKYISLHNNKLS---GSIPEEI------ 117 (786)
Q Consensus 52 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-----~~~~~~l~~L~~L~L~~N~l~---~~~~~~~------ 117 (786)
|+...++...+. ..+..+..+++|++|+|++|+|+.. ...+..+++|++|+|++|.+. +..|..+
T Consensus 11 L~~~~l~~~~~~-~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~ 89 (386)
T 2ca6_A 11 LKLDAITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQA 89 (386)
T ss_dssp CEESSCCSHHHH-TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHH
T ss_pred cccCCCCHHHHH-HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHH
Confidence 344444444554 4566777788888888888888653 234667788888888886443 3334333
Q ss_pred -cccCCcceeccccccccc----cCChhhhccCccceeecccccccCCCCCcCCCCCCcEEEccCcccccccCcccC---
Q 047901 118 -GNLMKLSYLMLDTNQFTG----QLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNISEDFG--- 189 (786)
Q Consensus 118 -~~l~~L~~L~L~~N~l~~----~~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~f~--- 189 (786)
..+++|++|+|++|+++. .+|..+..+++|+.|+|++|.+. ...+..+.
T Consensus 90 l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~-----------------------~~~~~~l~~~l 146 (386)
T 2ca6_A 90 LLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLG-----------------------PQAGAKIARAL 146 (386)
T ss_dssp HTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCH-----------------------HHHHHHHHHHH
T ss_pred HhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCC-----------------------HHHHHHHHHHH
Confidence 566667777777766664 23334444444444444444332 11111111
Q ss_pred -CC---------CCCCEEeccCCcccc-ccC---cCccCCCCccEEEccCcccCCCCCccccCCccccEEEeeccccccc
Q 047901 190 -IY---------PNLKFLDLSHNNFYG-EIS---SNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGE 255 (786)
Q Consensus 190 -~l---------~~L~~L~L~~N~i~~-~~~---~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~ 255 (786)
.+ ++|++|+|++|+|+. -.+ ..+..+++|++|+|++|+|+... +...
T Consensus 147 ~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g-------------------~~~l 207 (386)
T 2ca6_A 147 QELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEG-------------------IEHL 207 (386)
T ss_dssp HHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHH-------------------HHHH
T ss_pred HHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhH-------------------HHHH
Confidence 11 455555555555431 111 12333444444444444443100 0001
Q ss_pred CCCCcccccccccccccccccC----CCCccccccCCcCceecccccccccc----chhhhhc--ccCCcEEEecccccC
Q 047901 256 IPMELGRLISLNKLILRGNQLS----GHLPRALGLLTELEYFDLSSNRLNNS----ILEALGF--MFKLFYLNFSHNQFS 325 (786)
Q Consensus 256 ~~~~~~~l~~L~~L~L~~N~l~----~~~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~--l~~L~~L~L~~N~l~ 325 (786)
.+..+..+++|+.|+|++|.++ ..+|..+..+++|+.|+|++|+++.. .+..+.. +++|++|+|++|.++
T Consensus 208 ~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~ 287 (386)
T 2ca6_A 208 LLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIE 287 (386)
T ss_dssp HHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCB
T ss_pred HHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCC
Confidence 2223444444444444444442 23344455555555555555555543 1223322 566666666666665
Q ss_pred C----CcchHH-hhhcCcCeeeccCCccCCCC
Q 047901 326 Q----EIPEDL-ALLAHLSELDLSHNLFKGSI 352 (786)
Q Consensus 326 ~----~~~~~~-~~l~~L~~L~L~~N~l~~~~ 352 (786)
. .+|..+ ..+++|+.|+|++|++++..
T Consensus 288 ~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 288 LDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred HHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 4 244444 44566677777777666544
No 347
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=1.9e-24 Score=231.20 Aligned_cols=251 Identities=14% Similarity=0.171 Sum_probs=119.7
Q ss_pred CcEEEccCCcCcccCchhhccc--CCcceeccccccccccCChhhhccCccceeecccccccCCCCCcCCCCCCcEEEcc
Q 047901 99 LKYISLHNNKLSGSIPEEIGNL--MKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSLVRAHLG 176 (786)
Q Consensus 99 L~~L~L~~N~l~~~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~ 176 (786)
++.|++++|.+. +..+..+ ++++.|++++|.++ +.++.+..+++|+.|+++
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~------------------------~~~~~~~~~~~L~~L~L~ 101 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMD------------------------QPLAEHFSPFRVQHMDLS 101 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEEC------------------------SCCCSCCCCBCCCEEECT
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCcccc------------------------ccchhhccCCCCCEEEcc
Confidence 555566555544 3344444 45555555555444 333334445566666666
Q ss_pred Ccccccc-cCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCc-ccCCC-CCccccCCccccEEEeecc-cc
Q 047901 177 RNNLTGN-ISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGN-NITGR-IPPEIGNSSQLHVLDLSSN-HI 252 (786)
Q Consensus 177 ~N~l~~~-~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N-~l~~~-~~~~~~~l~~L~~L~Ls~N-~i 252 (786)
+|.++.. .+..+..+++|++|+|++|++++..+..+..+++|++|+|++| .+++. .+..+.++++|+.|+|++| .+
T Consensus 102 ~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l 181 (336)
T 2ast_B 102 NSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDF 181 (336)
T ss_dssp TCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTC
T ss_pred CCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCc
Confidence 6665543 4445566666666666666666555555555666666666666 44431 3333445555555555555 55
Q ss_pred ccc-CCCCccccc-ccccccccccccCCCCccccccCCcCceecccccccc-ccchhhhhcccCCcEEEecccc-cCCCc
Q 047901 253 AGE-IPMELGRLI-SLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLN-NSILEALGFMFKLFYLNFSHNQ-FSQEI 328 (786)
Q Consensus 253 ~~~-~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~-l~~~~ 328 (786)
++. ++..+..++ +|++|++++|.+ .++ ...+..+..+++|++|++++|. ++...
T Consensus 182 ~~~~~~~~~~~l~~~L~~L~l~~~~~----------------------~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~ 239 (336)
T 2ast_B 182 TEKHVQVAVAHVSETITQLNLSGYRK----------------------NLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDC 239 (336)
T ss_dssp CHHHHHHHHHHSCTTCCEEECCSCGG----------------------GSCHHHHHHHHHHCTTCSEEECTTCTTCCGGG
T ss_pred ChHHHHHHHHhcccCCCEEEeCCCcc----------------------cCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHH
Confidence 432 233334444 444444444421 122 1122233444445555555554 33334
Q ss_pred chHHhhhcCcCeeeccCCc-cCCCCCcccccccccceeccccccccccCCcccccC-CCceEEeccCCcccccCCC
Q 047901 329 PEDLALLAHLSELDLSHNL-FKGSIPSRICNLESLEKLNLSHNNISGQIPACFIGM-SGLLSIDISYNELRGPIPN 402 (786)
Q Consensus 329 ~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~l~~N~l~~~~p~ 402 (786)
+..+..+++|+.|++++|. +.......+.++++|+.|++++| ++ ...+..+ ..+..|++++|++++..|.
T Consensus 240 ~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~ 311 (336)
T 2ast_B 240 FQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARP 311 (336)
T ss_dssp GGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCS
T ss_pred HHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccCC
Confidence 4444455555555555553 11111113444555555555555 22 1122222 1233444555555555443
No 348
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=2.9e-25 Score=242.33 Aligned_cols=235 Identities=21% Similarity=0.277 Sum_probs=172.8
Q ss_pred cCCCCCCcEEEccCcccccccC----cccCCCCCCCEEeccCCccc---cccCcCc-------cCCCCccEEEccCcccC
Q 047901 164 LRNCRSLVRAHLGRNNLTGNIS----EDFGIYPNLKFLDLSHNNFY---GEISSNW-------GKCHRLGTLIVSGNNIT 229 (786)
Q Consensus 164 l~~l~~L~~L~L~~N~l~~~~~----~~f~~l~~L~~L~L~~N~i~---~~~~~~~-------~~l~~L~~L~L~~N~l~ 229 (786)
+..+++|+.|+|++|+|+...+ ..|..+++|++|+|++|.+. +..|..+ ..+++|++|+|++|.++
T Consensus 28 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~ 107 (386)
T 2ca6_A 28 LLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFG 107 (386)
T ss_dssp HHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCC
T ss_pred HhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCC
Confidence 4445556666666666655422 33666777777777775433 3333333 56778888888888877
Q ss_pred C----CCCccccCCccccEEEeecccccccCCCCccc----c---------cccccccccccccC-CCCc---cccccCC
Q 047901 230 G----RIPPEIGNSSQLHVLDLSSNHIAGEIPMELGR----L---------ISLNKLILRGNQLS-GHLP---RALGLLT 288 (786)
Q Consensus 230 ~----~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~----l---------~~L~~L~L~~N~l~-~~~~---~~~~~l~ 288 (786)
+ .+|..+..+++|+.|+|++|.++...+..+.. + ++|++|+|++|+++ ...+ ..+..++
T Consensus 108 ~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~ 187 (386)
T 2ca6_A 108 PTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHR 187 (386)
T ss_dssp TTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCC
Confidence 5 35566777888888888888886444433333 3 78889999999887 2333 4667888
Q ss_pred cCceeccccccccc-----cchhhhhcccCCcEEEecccccC----CCcchHHhhhcCcCeeeccCCccCCC----CCcc
Q 047901 289 ELEYFDLSSNRLNN-----SILEALGFMFKLFYLNFSHNQFS----QEIPEDLALLAHLSELDLSHNLFKGS----IPSR 355 (786)
Q Consensus 289 ~L~~L~L~~N~l~~-----~~~~~~~~l~~L~~L~L~~N~l~----~~~~~~~~~l~~L~~L~L~~N~l~~~----~~~~ 355 (786)
+|+.|+|++|++.. +.+..+..+++|++|+|++|.++ ..+|..+..+++|+.|+|++|.|++. ++..
T Consensus 188 ~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~ 267 (386)
T 2ca6_A 188 LLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDA 267 (386)
T ss_dssp TCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHH
T ss_pred CcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHH
Confidence 99999999999873 23337788899999999999996 56777888999999999999999865 4556
Q ss_pred cc--cccccceeccccccccc----cCCccc-ccCCCceEEeccCCcccc
Q 047901 356 IC--NLESLEKLNLSHNNISG----QIPACF-IGMSGLLSIDISYNELRG 398 (786)
Q Consensus 356 ~~--~l~~L~~L~L~~N~l~~----~~p~~~-~~l~~L~~L~l~~N~l~~ 398 (786)
+. .+++|+.|+|++|.|++ .+|..+ .++++|+.|++++|++++
T Consensus 268 l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~ 317 (386)
T 2ca6_A 268 FSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 317 (386)
T ss_dssp HHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred HhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCc
Confidence 63 38999999999999998 467666 668999999999999875
No 349
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.87 E-value=1.9e-22 Score=208.89 Aligned_cols=146 Identities=20% Similarity=0.224 Sum_probs=116.3
Q ss_pred HHHHHHhccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCc-----h---------hhHHHHHHHHHHHhhcC
Q 047901 499 EEIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQ-----M---------SDQKEFLNEIKALTKIR 564 (786)
Q Consensus 499 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-----~---------~~~~~~~~e~~~l~~l~ 564 (786)
..+......|.+.+.||+|+||.||+|+..+++.||||+++....... . .....+.+|++++++++
T Consensus 83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~ 162 (282)
T 1zar_A 83 HRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 162 (282)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence 344455667778899999999999999987789999999965321110 0 13567899999999999
Q ss_pred CCcccceeeEEecCCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCcee
Q 047901 565 HRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVL 644 (786)
Q Consensus 565 hpniv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nil 644 (786)
| +++.+++.. +..|+||||+++|+|.+ +.. .....++.|++.|+.|||+. +|+||||||+|||
T Consensus 163 --~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NIL 225 (282)
T 1zar_A 163 --G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVL 225 (282)
T ss_dssp --T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEE
T ss_pred --C-CCcCeEEec-cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEE
Confidence 4 666665544 55699999999999988 421 12446999999999999999 9999999999999
Q ss_pred eCCCCcEEEeccccceec
Q 047901 645 LDLEYEARVSDFGTAKLL 662 (786)
Q Consensus 645 l~~~~~~kl~Dfg~a~~~ 662 (786)
++ ++.+||+|||+|+..
T Consensus 226 l~-~~~vkl~DFG~a~~~ 242 (282)
T 1zar_A 226 VS-EEGIWIIDFPQSVEV 242 (282)
T ss_dssp EE-TTEEEECCCTTCEET
T ss_pred EE-CCcEEEEECCCCeEC
Confidence 99 999999999999744
No 350
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=1.1e-21 Score=194.04 Aligned_cols=178 Identities=19% Similarity=0.180 Sum_probs=94.3
Q ss_pred EEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeeccc
Q 047901 172 RAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNH 251 (786)
Q Consensus 172 ~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 251 (786)
.+++.++.++.++... .++|++|+|++|+++++.+..|..+++|++|+|++|+++++.+..|..+++|++|+|++|+
T Consensus 11 ~v~c~~~~l~~~p~~~---~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 87 (208)
T 2o6s_A 11 TVECYSQGRTSVPTGI---PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQ 87 (208)
T ss_dssp EEECCSSCCSSCCSCC---CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEecCCCccCCCCCC---CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCc
Confidence 3444555554443221 2456666666666665555555566666666666666655544455555666666666666
Q ss_pred ccccCCCCcccccccccccccccccCCCCccccccCCcCceeccccccccccchhhhhcccCCcEEEecccccCCCcchH
Q 047901 252 IAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQEIPED 331 (786)
Q Consensus 252 i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 331 (786)
+++..+..|.++++|+.|+|++|+++++.+..|..+++|+.|++++|+++.+++..|..+++|++|++++|.+.+.
T Consensus 88 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~---- 163 (208)
T 2o6s_A 88 LQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT---- 163 (208)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC----
T ss_pred CCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC----
Confidence 5544444555555555555555555555555555555555555555555554444444455555555555544321
Q ss_pred HhhhcCcCeeeccCCccCCCCCcccccc
Q 047901 332 LALLAHLSELDLSHNLFKGSIPSRICNL 359 (786)
Q Consensus 332 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l 359 (786)
+++|+.|+++.|++++.+|..++.+
T Consensus 164 ---~~~l~~L~~~~n~~~g~ip~~~~~l 188 (208)
T 2o6s_A 164 ---CPGIRYLSEWINKHSGVVRNSAGSV 188 (208)
T ss_dssp ---TTTTHHHHHHHHHCTTTBBCTTSSB
T ss_pred ---CCCHHHHHHHHHhCCceeeccCccc
Confidence 2344445555555555444444433
No 351
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=1.6e-21 Score=193.08 Aligned_cols=190 Identities=20% Similarity=0.134 Sum_probs=156.2
Q ss_pred ceeecccccccCCCCCcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcc
Q 047901 148 EILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNN 227 (786)
Q Consensus 148 ~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~ 227 (786)
+.++++++.++.++..+. ++|+.|++++|+++++.+..|..+++|++|+|++|+++++.+..|..+++|++|+|++|+
T Consensus 10 ~~v~c~~~~l~~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 87 (208)
T 2o6s_A 10 TTVECYSQGRTSVPTGIP--AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQ 87 (208)
T ss_dssp TEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEecCCCccCCCCCCC--CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCc
Confidence 345566666665554443 578888999999988888888899999999999999998888888899999999999999
Q ss_pred cCCCCCccccCCccccEEEeecccccccCCCCcccccccccccccccccCCCCccccccCCcCceeccccccccccchhh
Q 047901 228 ITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSILEA 307 (786)
Q Consensus 228 l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 307 (786)
++++.+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+++++.+..|..+++|+.|++++|.+..
T Consensus 88 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~----- 162 (208)
T 2o6s_A 88 LQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC----- 162 (208)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-----
T ss_pred CCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec-----
Confidence 997777778899999999999999998777788999999999999999998888888999999999999998763
Q ss_pred hhcccCCcEEEecccccCCCcchHHhhhcCcCeeeccCCccCC
Q 047901 308 LGFMFKLFYLNFSHNQFSQEIPEDLALLAHLSELDLSHNLFKG 350 (786)
Q Consensus 308 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 350 (786)
.+++|++|+++.|++++.+|..++.++. ++..|...+
T Consensus 163 --~~~~l~~L~~~~n~~~g~ip~~~~~l~~----~~~~C~~~~ 199 (208)
T 2o6s_A 163 --TCPGIRYLSEWINKHSGVVRNSAGSVAP----DSAKCSGSG 199 (208)
T ss_dssp --CTTTTHHHHHHHHHCTTTBBCTTSSBCT----TCSBBTTTC
T ss_pred --CCCCHHHHHHHHHhCCceeeccCccccC----CccccccCC
Confidence 4567899999999999999988776554 444554443
No 352
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=8.9e-22 Score=222.31 Aligned_cols=186 Identities=24% Similarity=0.236 Sum_probs=95.2
Q ss_pred CCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCCCCCCCCCCcEEEccCCcCcccCchhhcccCCcceecccc
Q 047901 51 KLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFPPICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLDT 130 (786)
Q Consensus 51 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 130 (786)
+|+.|+|++|+|++ +|..+ .++|++|+|++|+|+.++ ..+++|++|+|++|+|++++. |.+ +|++|+|++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~~ip---~~l~~L~~L~Ls~N~l~~ip~--l~~--~L~~L~Ls~ 129 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALISLP---ELPASLEYLDACDNRLSTLPE--LPA--SLKHLDVDN 129 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCSCCC---CCCTTCCEEECCSSCCSCCCC--CCT--TCCEEECCS
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCcccc---cccCCCCEEEccCCCCCCcch--hhc--CCCEEECCC
Confidence 56666666666654 33333 255666666666665444 234566666666666655332 433 566666666
Q ss_pred ccccccCChhhhccCccceeecccccccCCCCCcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCc
Q 047901 131 NQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISS 210 (786)
Q Consensus 131 N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~ 210 (786)
|+|++ +|. .+++|+.|++++|.+++++. .+++|+.|+|++|+|++++. |. ++|++|+|++|+|+.+++
T Consensus 130 N~l~~-lp~---~l~~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~N~L~~lp~--l~--~~L~~L~Ls~N~L~~lp~- 197 (571)
T 3cvr_A 130 NQLTM-LPE---LPALLEYINADNNQLTMLPE---LPTSLEVLSVRNNQLTFLPE--LP--ESLEALDVSTNLLESLPA- 197 (571)
T ss_dssp SCCSC-CCC---CCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCSCCCC--CC--TTCCEEECCSSCCSSCCC-
T ss_pred CcCCC-CCC---cCccccEEeCCCCccCcCCC---cCCCcCEEECCCCCCCCcch--hh--CCCCEEECcCCCCCchhh-
Confidence 66554 333 34455555555555544332 34555555555555555333 33 556666666665553333
Q ss_pred CccCCCCc-------cEEEccCcccCCCCCccccCCccccEEEeecccccccCCCCccc
Q 047901 211 NWGKCHRL-------GTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGR 262 (786)
Q Consensus 211 ~~~~l~~L-------~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~ 262 (786)
|.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|++++..|..+..
T Consensus 198 -~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~ 252 (571)
T 3cvr_A 198 -VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQ 252 (571)
T ss_dssp -CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHH
T ss_pred -HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHH
Confidence 332 44 55555555555 23444444555555555555555554444443
No 353
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=1e-21 Score=221.77 Aligned_cols=200 Identities=20% Similarity=0.153 Sum_probs=116.6
Q ss_pred cccCCC-----CCCEEeCCCccCcccCCCCCCCCCCcEEEccCCcCcccCchhhcccCCcceeccccccccccCChhhhc
Q 047901 69 EIGLLT-----HLFSLDLSLNQFSGTFPPICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICR 143 (786)
Q Consensus 69 ~~~~l~-----~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 143 (786)
.|..++ +|+.|+|++|+|++++..+. ++|++|+|++|+|+.++ ..+++|++|+|++|+|++ +|. +..
T Consensus 49 ~~~~l~~C~~~~L~~L~Ls~n~L~~lp~~l~--~~L~~L~Ls~N~l~~ip----~~l~~L~~L~Ls~N~l~~-ip~-l~~ 120 (571)
T 3cvr_A 49 AVSLLKECLINQFSELQLNRLNLSSLPDNLP--PQITVLEITQNALISLP----ELPASLEYLDACDNRLST-LPE-LPA 120 (571)
T ss_dssp HHHHHHHHHHTTCSEEECCSSCCSCCCSCCC--TTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCSC-CCC-CCT
T ss_pred hhhhccccccCCccEEEeCCCCCCccCHhHc--CCCCEEECcCCCCcccc----cccCCCCEEEccCCCCCC-cch-hhc
Confidence 566665 89999999999998776663 78999999999998554 457889999999998886 555 443
Q ss_pred cCccceeecccccccCCCCCcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEc
Q 047901 144 SGLLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIV 223 (786)
Q Consensus 144 ~~~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 223 (786)
+|+.|+|++|.+++++. .+++|+.|+|++|+|++++. .+++|++|+|++|+|+++++ |. ++|+.|+|
T Consensus 121 --~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~N~l~~lp~----~l~~L~~L~Ls~N~L~~lp~--l~--~~L~~L~L 187 (571)
T 3cvr_A 121 --SLKHLDVDNNQLTMLPE---LPALLEYINADNNQLTMLPE----LPTSLEVLSVRNNQLTFLPE--LP--ESLEALDV 187 (571)
T ss_dssp --TCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSCCCC--CC--TTCCEEEC
T ss_pred --CCCEEECCCCcCCCCCC---cCccccEEeCCCCccCcCCC----cCCCcCEEECCCCCCCCcch--hh--CCCCEEEC
Confidence 66666666666665433 44555555555555554332 34555555555555554322 33 45555555
Q ss_pred cCcccCCCCCccccCCccccEEEeecccccccCCCCcccccccccccccccccCCCCccccccCCcCceecccccccccc
Q 047901 224 SGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNS 303 (786)
Q Consensus 224 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 303 (786)
++|+|+ .+|. |.. +| +...+.|+.|+|++|+|+. +|..+..+++|+.|+|++|++++.
T Consensus 188 s~N~L~-~lp~-~~~--~L-----------------~~~~~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~L~~N~l~~~ 245 (571)
T 3cvr_A 188 STNLLE-SLPA-VPV--RN-----------------HHSEETEIFFRCRENRITH-IPENILSLDPTCTIILEDNPLSSR 245 (571)
T ss_dssp CSSCCS-SCCC-CC---------------------------CCEEEECCSSCCCC-CCGGGGGSCTTEEEECCSSSCCHH
T ss_pred cCCCCC-chhh-HHH--hh-----------------hcccccceEEecCCCccee-cCHHHhcCCCCCEEEeeCCcCCCc
Confidence 555555 2232 322 33 0000111555555555553 233333455555555555555555
Q ss_pred chhhhhcc
Q 047901 304 ILEALGFM 311 (786)
Q Consensus 304 ~~~~~~~l 311 (786)
.+..+..+
T Consensus 246 ~p~~l~~l 253 (571)
T 3cvr_A 246 IRESLSQQ 253 (571)
T ss_dssp HHHHHHHH
T ss_pred CHHHHHHh
Confidence 55554443
No 354
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.85 E-value=4.2e-21 Score=200.28 Aligned_cols=189 Identities=22% Similarity=0.276 Sum_probs=110.5
Q ss_pred CcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCCCCCCCCCCcEEEccCC
Q 047901 28 LAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFPPICNLSNLKYISLHNN 107 (786)
Q Consensus 28 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N 107 (786)
+..+.+..+.+++..+ +..+++|++|++++|.|+.+ + .+..+++|++|+|++|++++.++ +..+++|++|+|++|
T Consensus 26 ~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~-l~~l~~L~~L~l~~n 100 (291)
T 1h6t_A 26 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDEN 100 (291)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSS
T ss_pred HHHHHhcCCCcccccc--hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc-cccCCCCCEEECCCC
Confidence 3344455555543322 34566666666666666643 2 36666666666666666665544 666666666666666
Q ss_pred cCcccCchhhcccCCcceeccccccccccCChhhhccCccceeecccccccCCCCCcCCCCCCcEEEccCcccccccCcc
Q 047901 108 KLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNISED 187 (786)
Q Consensus 108 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~ 187 (786)
+++++ ..+..+++|++|+|++|++++. .. +..+++|+.|++++|+++++ ..
T Consensus 101 ~l~~~--~~l~~l~~L~~L~L~~n~i~~~--~~-----------------------l~~l~~L~~L~l~~n~l~~~--~~ 151 (291)
T 1h6t_A 101 KVKDL--SSLKDLKKLKSLSLEHNGISDI--NG-----------------------LVHLPQLESLYLGNNKITDI--TV 151 (291)
T ss_dssp CCCCG--GGGTTCTTCCEEECTTSCCCCC--GG-----------------------GGGCTTCCEEECCSSCCCCC--GG
T ss_pred cCCCC--hhhccCCCCCEEECCCCcCCCC--hh-----------------------hcCCCCCCEEEccCCcCCcc--hh
Confidence 66643 2366666666666666666531 12 33344455555555555544 34
Q ss_pred cCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccc
Q 047901 188 FGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAG 254 (786)
Q Consensus 188 f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~ 254 (786)
|..+++|++|+|++|+|+++.+ +..+++|+.|+|++|+|+++ + .+..+++|+.|++++|++..
T Consensus 152 l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 152 LSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp GGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred hccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 5566666666666666665544 66666666666666666643 2 36666677777777776664
No 355
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.84 E-value=4.5e-21 Score=199.98 Aligned_cols=173 Identities=20% Similarity=0.186 Sum_probs=132.2
Q ss_pred cCCCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCCCCCCCCCCcE
Q 047901 22 FSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFPPICNLSNLKY 101 (786)
Q Consensus 22 f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~ 101 (786)
+..+++|+.|++++|.+..+. .+..+++|++|+|++|+|+++.+ +..+++|++|+|++|++++.+ .+..+++|++
T Consensus 42 ~~~l~~L~~L~l~~~~i~~~~--~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~-~l~~l~~L~~ 116 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDLS-SLKDLKKLKS 116 (291)
T ss_dssp HHHHHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCGG-GGTTCTTCCE
T ss_pred hhhcCcccEEEccCCCcccCh--hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCCh-hhccCCCCCE
Confidence 457889999999999997663 48999999999999999997655 999999999999999998754 4889999999
Q ss_pred EEccCCcCcccCchhhcccCCcceeccccccccccCChhhhccCccceeecccccccCCCCCcCCCCCCcEEEccCcccc
Q 047901 102 ISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLT 181 (786)
Q Consensus 102 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~ 181 (786)
|+|++|+++++ ..+..+++|++|++++|++++. ..+..+++| +.|++++|+|+
T Consensus 117 L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L-----------------------~~L~L~~N~l~ 169 (291)
T 1h6t_A 117 LSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKL-----------------------DTLSLEDNQIS 169 (291)
T ss_dssp EECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTC-----------------------SEEECCSSCCC
T ss_pred EECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCC-----------------------CEEEccCCccc
Confidence 99999999975 5689999999999999999853 445444444 44555555555
Q ss_pred cccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCC
Q 047901 182 GNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITG 230 (786)
Q Consensus 182 ~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 230 (786)
++.+ +..+++|++|+|++|+|+++. .+..+++|+.|++++|+++.
T Consensus 170 ~~~~--l~~l~~L~~L~L~~N~i~~l~--~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 170 DIVP--LAGLTKLQNLYLSKNHISDLR--ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CCGG--GTTCTTCCEEECCSSCCCBCG--GGTTCTTCSEEEEEEEEEEC
T ss_pred cchh--hcCCCccCEEECCCCcCCCCh--hhccCCCCCEEECcCCcccC
Confidence 4433 555666666666666666542 35666666666666666653
No 356
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.83 E-value=1.2e-20 Score=203.48 Aligned_cols=162 Identities=27% Similarity=0.198 Sum_probs=90.3
Q ss_pred eeecccccccCCCCCcCCCCCCcEEEccCcccccccCcccC-CCCCCCEEeccCCccccccCcCccCCCCccEEEccCcc
Q 047901 149 ILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNISEDFG-IYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNN 227 (786)
Q Consensus 149 ~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~f~-~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~ 227 (786)
.+++++|.++.++..+. +.++.|+|++|+|+++.+..|. .+++|++|+|++|+|+++.+..|..+++|++|+|++|+
T Consensus 22 ~l~c~~~~l~~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~ 99 (361)
T 2xot_A 22 ILSCSKQQLPNVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNH 99 (361)
T ss_dssp EEECCSSCCSSCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcCccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCc
Confidence 44555555554444333 2355666666666666665565 66666666666666666666666666666666666666
Q ss_pred cCCCCCccccCCccccEEEeecccccccCCCCcccccccccccccccccCCCCcccc---ccCCcCceeccccccccccc
Q 047901 228 ITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRAL---GLLTELEYFDLSSNRLNNSI 304 (786)
Q Consensus 228 l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~---~~l~~L~~L~L~~N~l~~~~ 304 (786)
|+.+.+..|.++++|+.|+|++|+|+++.+..|.++++|+.|+|++|+|+.+.+..| ..+++|+.|+|++|+|+.++
T Consensus 100 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~ 179 (361)
T 2xot_A 100 LHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLP 179 (361)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCC
T ss_pred CCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccC
Confidence 665555556666666666666666665555555555555555555555555444444 33444555555555444444
Q ss_pred hhhhhccc
Q 047901 305 LEALGFMF 312 (786)
Q Consensus 305 ~~~~~~l~ 312 (786)
...|..++
T Consensus 180 ~~~~~~l~ 187 (361)
T 2xot_A 180 LTDLQKLP 187 (361)
T ss_dssp HHHHHHSC
T ss_pred HHHhhhcc
Confidence 44444443
No 357
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.83 E-value=1.1e-20 Score=216.02 Aligned_cols=190 Identities=21% Similarity=0.271 Sum_probs=93.7
Q ss_pred CcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCCCCCCCCCCcEEEccCC
Q 047901 28 LAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFPPICNLSNLKYISLHNN 107 (786)
Q Consensus 28 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N 107 (786)
+..+.|+.+.+..+.+ +..|++|+.|+|++|.|+.+ + .|..+++|+.|+|++|+|+++++ +..+++|+.|+|++|
T Consensus 23 l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N 97 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP-LTNLKNLGWLFLDEN 97 (605)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG-GGGCTTCCEEECCSS
T ss_pred HHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh-hccCCCCCEEECcCC
Confidence 3444455555443332 34455555555555555532 2 35555555555555555554433 455555555555555
Q ss_pred cCcccCchhhcccCCcceeccccccccccCChhhhccCccceeecccccccCCCCCcCCCCCCcEEEccCcccccccCcc
Q 047901 108 KLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNISED 187 (786)
Q Consensus 108 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~ 187 (786)
+|+++. .|..+++|++|+|++|++++. ..+ ..+++|+.|+|++|+|+++ ..
T Consensus 98 ~l~~l~--~l~~l~~L~~L~Ls~N~l~~l--~~l-----------------------~~l~~L~~L~Ls~N~l~~l--~~ 148 (605)
T 1m9s_A 98 KIKDLS--SLKDLKKLKSLSLEHNGISDI--NGL-----------------------VHLPQLESLYLGNNKITDI--TV 148 (605)
T ss_dssp CCCCCT--TSTTCTTCCEEECTTSCCCCC--GGG-----------------------GGCTTCSEEECCSSCCCCC--GG
T ss_pred CCCCCh--hhccCCCCCEEEecCCCCCCC--ccc-----------------------cCCCccCEEECCCCccCCc--hh
Confidence 555321 355555555555555555421 122 3333444444444444433 34
Q ss_pred cCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeeccccccc
Q 047901 188 FGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGE 255 (786)
Q Consensus 188 f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~ 255 (786)
|..+++|++|+|++|+|.++.| +..+++|+.|+|++|+|+++ +.+..+++|+.|+|++|++.+.
T Consensus 149 l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 149 LSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp GGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred hcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 4455555555555555554444 55555555555555555543 2455555555555555555543
No 358
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.83 E-value=1.4e-20 Score=215.07 Aligned_cols=205 Identities=22% Similarity=0.276 Sum_probs=162.6
Q ss_pred CCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCCCCCCCCCCcEEEccCCcCcccCchhhcccCCcceecccc
Q 047901 51 KLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFPPICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLDT 130 (786)
Q Consensus 51 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 130 (786)
++..+.|+.+.+..+.+ +..|++|+.|+|++|.|+.++ .+..+++|+.|+|++|+|+++.+ |..+++|+.|+|++
T Consensus 22 ~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~ 96 (605)
T 1m9s_A 22 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDE 96 (605)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCS
T ss_pred HHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcC
Confidence 35556677777775543 567788888888888887653 57778888888888888876655 77777788888777
Q ss_pred ccccccCChhhhccCccceeecccccccCCCCCcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCc
Q 047901 131 NQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISS 210 (786)
Q Consensus 131 N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~ 210 (786)
|+|++ ++.+..+++|+.|+|++|+|+++ ..|..+++|+.|+|++|+|+++ .
T Consensus 97 N~l~~-------------------------l~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~ 147 (605)
T 1m9s_A 97 NKIKD-------------------------LSSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--T 147 (605)
T ss_dssp SCCCC-------------------------CTTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--G
T ss_pred CCCCC-------------------------ChhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--h
Confidence 77762 22466778888888888888875 4688999999999999999987 6
Q ss_pred CccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCCCCcccccccccccccccccCCCCccccccCCcC
Q 047901 211 NWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTEL 290 (786)
Q Consensus 211 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 290 (786)
.+..+++|+.|+|++|+|+++.| +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|.+...+...+..+..+
T Consensus 148 ~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~~l~~~ 223 (605)
T 1m9s_A 148 VLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQSNLVVP 223 (605)
T ss_dssp GGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCCCCSSCEEE
T ss_pred hhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCcccccccEEec
Confidence 79999999999999999997755 99999999999999999965 468999999999999999987655555554444
Q ss_pred cee
Q 047901 291 EYF 293 (786)
Q Consensus 291 ~~L 293 (786)
..+
T Consensus 224 ~~l 226 (605)
T 1m9s_A 224 NTV 226 (605)
T ss_dssp CCC
T ss_pred ccc
Confidence 433
No 359
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.83 E-value=1.4e-20 Score=202.80 Aligned_cols=177 Identities=24% Similarity=0.210 Sum_probs=155.8
Q ss_pred cEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCcc-CCCCccEEEccCcccCCCCCccccCCccccEEEeec
Q 047901 171 VRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWG-KCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSS 249 (786)
Q Consensus 171 ~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 249 (786)
..+++++|+|+.++... .+.++.|+|++|+|+++.+..|. .+++|+.|+|++|+|+++.+..|.++++|+.|+|++
T Consensus 21 ~~l~c~~~~l~~iP~~~---~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPNVPQSL---PSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSSCCSSC---CTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCccCccC---CCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 57899999999865432 35689999999999999999898 999999999999999988888999999999999999
Q ss_pred ccccccCCCCcccccccccccccccccCCCCccccccCCcCceeccccccccccchhhh---hcccCCcEEEecccccCC
Q 047901 250 NHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSILEAL---GFMFKLFYLNFSHNQFSQ 326 (786)
Q Consensus 250 N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~---~~l~~L~~L~L~~N~l~~ 326 (786)
|+|+++.+..|.++++|+.|+|++|+|+.+.+..|.++++|+.|+|++|+|+.++...| ..+++|+.|+|++|+|+.
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 99998888889999999999999999998888999999999999999999999888887 568899999999999988
Q ss_pred CcchHHhhhcC--cCeeeccCCccCC
Q 047901 327 EIPEDLALLAH--LSELDLSHNLFKG 350 (786)
Q Consensus 327 ~~~~~~~~l~~--L~~L~L~~N~l~~ 350 (786)
..+..|..++. |+.|+|++|++..
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred cCHHHhhhccHhhcceEEecCCCccC
Confidence 77778888877 4888999998874
No 360
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.83 E-value=4.3e-20 Score=184.08 Aligned_cols=150 Identities=22% Similarity=0.247 Sum_probs=81.3
Q ss_pred eeecccccccCCCCCcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCccc
Q 047901 149 ILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNI 228 (786)
Q Consensus 149 ~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l 228 (786)
.+++++|.++.++..+. ++|+.|++++|+|+++.+..|..+++|++|+|++|+|+++.|..|.++++|++|+|++|+|
T Consensus 15 ~v~c~~~~l~~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l 92 (220)
T 2v9t_B 15 IVDCRGKGLTEIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI 92 (220)
T ss_dssp EEECTTSCCSSCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCC
T ss_pred EEEcCCCCcCcCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcC
Confidence 34445555544444333 4555556666666555555565566666666666666555555555555555555555555
Q ss_pred CCCCCccccCCccccEEEeecccccccCCCCcccccccccccccccccCCCCccccccCCcCceeccccccc
Q 047901 229 TGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRL 300 (786)
Q Consensus 229 ~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 300 (786)
+.+.+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+++.+..|..+++|+.|+|++|++
T Consensus 93 ~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 164 (220)
T 2v9t_B 93 TELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPF 164 (220)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCE
T ss_pred CccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCc
Confidence 544444455555555555555555555555555555555555555555544444454444555444444444
No 361
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.82 E-value=6.9e-20 Score=182.62 Aligned_cols=150 Identities=21% Similarity=0.223 Sum_probs=111.6
Q ss_pred EEEcCCCCCcccCCcCccCCCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCc
Q 047901 5 SINLTSTGLKGTLQEFSFSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLN 84 (786)
Q Consensus 5 ~l~l~~~~l~~~l~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 84 (786)
.++++++++. .+|... .++|+.|+|++|+|+++.+..|.++++|++|+|++|+|+++.|.+|..+++|++|+|++|
T Consensus 15 ~v~c~~~~l~-~iP~~l---~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNL---PETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp EEECTTSCCS-SCCSSC---CTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred EEEcCCCCcC-cCCCcc---CcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 4677777776 566532 257788888888887777777888888888888888887777778888888888888888
Q ss_pred cCcccCCC-CCCCCCCcEEEccCCcCcccCchhhcccCCcceeccccccccccCChhhhccCccceeeccccccc
Q 047901 85 QFSGTFPP-ICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFL 158 (786)
Q Consensus 85 ~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~ 158 (786)
+|+.+++. |..+++|++|+|++|+|+++.+..|.++++|++|+|++|+|++..+..|..+++|+.|++++|.+.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 88777665 567788888888888888777777878888888888888877666666666666666666666654
No 362
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.82 E-value=7.8e-21 Score=195.00 Aligned_cols=168 Identities=20% Similarity=0.279 Sum_probs=89.4
Q ss_pred CCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCCCCCCCCCCcEEEccCCcCcccCchhhcccCCcceecccc
Q 047901 51 KLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFPPICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLDT 130 (786)
Q Consensus 51 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 130 (786)
++..+++++|.++.+. .+..+++|+.|++++|+|+.++ .+..+++|++|+|++|+|+++.+ |.++++|++|+|++
T Consensus 20 ~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~ 94 (263)
T 1xeu_A 20 NAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQSLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNR 94 (263)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCS
T ss_pred HHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcccch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCC
Confidence 3444445555554322 3444555555555555554333 34445555555555555554433 55555555555555
Q ss_pred ccccccCChhhhccCccceeecccccccCCCCCcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCc
Q 047901 131 NQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISS 210 (786)
Q Consensus 131 N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~ 210 (786)
|++++. |. +.. ++|+.|+|++|+|+++ +.|..+++|++|+|++|+|+++.
T Consensus 95 N~l~~l-~~------------------------~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~~-- 144 (263)
T 1xeu_A 95 NRLKNL-NG------------------------IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSIV-- 144 (263)
T ss_dssp SCCSCC-TT------------------------CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBCG--
T ss_pred CccCCc-Cc------------------------ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCCh--
Confidence 555421 11 111 3444445555554443 23556666666666666666542
Q ss_pred CccCCCCccEEEccCcccCCCCCccccCCccccEEEeeccccccc
Q 047901 211 NWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGE 255 (786)
Q Consensus 211 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~ 255 (786)
.+..+++|+.|+|++|+|++. ..+..+++|+.|++++|.+...
T Consensus 145 ~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 145 MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 466666666666666666654 5566666777777777766644
No 363
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=7e-20 Score=182.56 Aligned_cols=151 Identities=19% Similarity=0.198 Sum_probs=82.7
Q ss_pred eeecccccccCCCCCcCCCCCCcEEEccCcccccccC-cccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcc
Q 047901 149 ILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNIS-EDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNN 227 (786)
Q Consensus 149 ~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~ 227 (786)
.+++++|.++.++..+. ..++.|+|++|+|+++.+ ..|..+++|++|+|++|+|+++.+..|.++++|++|+|++|+
T Consensus 15 ~l~~s~n~l~~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~ 92 (220)
T 2v70_A 15 TVDCSNQKLNKIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNR 92 (220)
T ss_dssp EEECCSSCCSSCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EeEeCCCCcccCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCc
Confidence 44444444444433332 234556666666655532 345566666666666666665555556666666666666666
Q ss_pred cCCCCCccccCCccccEEEeecccccccCCCCcccccccccccccccccCCCCccccccCCcCceecccccccc
Q 047901 228 ITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLN 301 (786)
Q Consensus 228 l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 301 (786)
|+++.+..|.++++|++|+|++|+|+++.|..|..+++|+.|+|++|+|+++.|..|..+++|+.|+|++|++.
T Consensus 93 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 93 LENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp CCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred cCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 65555555555555555555555555555555555555555555555555555555555555555555555443
No 364
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.81 E-value=1.4e-20 Score=200.38 Aligned_cols=222 Identities=11% Similarity=0.031 Sum_probs=157.8
Q ss_pred CCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcc----cCCCCCccccCCccc
Q 047901 167 CRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNN----ITGRIPPEIGNSSQL 242 (786)
Q Consensus 167 l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~----l~~~~~~~~~~l~~L 242 (786)
|++|+.+.|.+ +++.+...+|.++++|++|++++|.+..+.+.+|.++.++..+.++.+. ...+.+.+|.++..|
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 67777777777 7777777888888888888888888877888888887777777666532 233445566666666
Q ss_pred c-EEEeeccc-ccccCCCCcccccccccccccccccCCCCccccccCCcCceeccccccccccchhhhhcccCCcEEEec
Q 047901 243 H-VLDLSSNH-IAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFS 320 (786)
Q Consensus 243 ~-~L~Ls~N~-i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 320 (786)
+ .+.+.... +............++..+.+.++-...........+++|+.|+|++|.++.++..+|.++.+|+.|+|.
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~ 258 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLP 258 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECC
Confidence 6 45554321 111111111223455555555542211111111237889999999988998888999999999999998
Q ss_pred ccccCCCcchHHhhhcCcC-eeeccCCccCCCCCcccccccccceeccccccccccCCcccccCCCceEEec
Q 047901 321 HNQFSQEIPEDLALLAHLS-ELDLSHNLFKGSIPSRICNLESLEKLNLSHNNISGQIPACFIGMSGLLSIDI 391 (786)
Q Consensus 321 ~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 391 (786)
+| ++.+.+.+|.++.+|+ .|++.+ .++.+.+..|.++++|+.|++++|+++.+.+.+|.++++|+.++.
T Consensus 259 ~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 259 HN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp TT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred cc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 88 7777778899999998 999988 777677789999999999999999998888889999999988764
No 365
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.81 E-value=7.7e-20 Score=182.26 Aligned_cols=153 Identities=22% Similarity=0.184 Sum_probs=86.8
Q ss_pred cEEEccCcccCCCCCccccCCccccEEEeecccccccCC-CCcccccccccccccccccCCCCccccccCCcCceecccc
Q 047901 219 GTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIP-MELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSS 297 (786)
Q Consensus 219 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 297 (786)
+++++++|.++. +|..+. ..++.|+|++|+|++..+ ..|..+++|+.|+|++|+|+++.+..|.++++|+.|+|++
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 467777777774 444443 345677777777765533 3456666666666666666655555566666666666666
Q ss_pred ccccccchhhhhcccCCcEEEecccccCCCcchHHhhhcCcCeeeccCCccCCCCCcccccccccceeccccccccc
Q 047901 298 NRLNNSILEALGFMFKLFYLNFSHNQFSQEIPEDLALLAHLSELDLSHNLFKGSIPSRICNLESLEKLNLSHNNISG 374 (786)
Q Consensus 298 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 374 (786)
|+++.+.+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|++.+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 66555555555555555555555555555445555555555555555555554444455555555555555555443
No 366
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.81 E-value=1.6e-18 Score=188.31 Aligned_cols=265 Identities=12% Similarity=0.111 Sum_probs=178.4
Q ss_pred CCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCC-CCCCCCCCcEEE
Q 047901 25 FPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFP-PICNLSNLKYIS 103 (786)
Q Consensus 25 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~ 103 (786)
+..++.+.+- |.++.+...+|.+. +|+.+.|.+| ++.+...+|.+ .+|+.+.|.. .++.+.. .|.++++|+.++
T Consensus 112 ~~~l~~i~ip-~~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~ 186 (401)
T 4fdw_A 112 LKGYNEIILP-NSVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKAD 186 (401)
T ss_dssp CSSCSEEECC-TTCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEE
T ss_pred cCCccEEEEC-CccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeee
Confidence 3555555554 34555555555553 4666665554 55455555555 3466666654 4444433 355556666666
Q ss_pred ccCCcCcccCchhhcccCCcceeccccccccccCChhhhccCccceeecccccccCCCCC-cCCCCCCcEEEccCccccc
Q 047901 104 LHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPN-LRNCRSLVRAHLGRNNLTG 182 (786)
Q Consensus 104 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~-l~~l~~L~~L~L~~N~l~~ 182 (786)
|.+|+++.+...+|. ..+|+.+.|..+ ++.....+|.++.+|+.+++.+| ++.+... |.+ .+|+.+.+ .|.++.
T Consensus 187 l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~ 261 (401)
T 4fdw_A 187 LSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTN 261 (401)
T ss_dssp CTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCE
T ss_pred cCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccE
Confidence 666666655555555 355666666533 55455555666666666666553 3332222 444 57777777 456777
Q ss_pred ccCcccCCCCCCCEEeccCCccc-----cccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCC
Q 047901 183 NISEDFGIYPNLKFLDLSHNNFY-----GEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIP 257 (786)
Q Consensus 183 ~~~~~f~~l~~L~~L~L~~N~i~-----~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~ 257 (786)
+...+|.++++|+.+++.+|.+. .+.+.+|.++++|+.++|. +.++.+...+|.++.+|+.++|..| ++.+..
T Consensus 262 I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~ 339 (401)
T 4fdw_A 262 IASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINF 339 (401)
T ss_dssp ECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECT
T ss_pred EChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcH
Confidence 88888888888999888888775 6788889999999999998 4577777888888899999999655 776778
Q ss_pred CCcccccccccccccccccCCCCccccccCC-cCceeccccccccc
Q 047901 258 MELGRLISLNKLILRGNQLSGHLPRALGLLT-ELEYFDLSSNRLNN 302 (786)
Q Consensus 258 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~ 302 (786)
.+|.++ +|+.+++.+|.+..+.+..|.+++ +++.|++..+.+..
T Consensus 340 ~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~~ 384 (401)
T 4fdw_A 340 SAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVEK 384 (401)
T ss_dssp TSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHHH
T ss_pred HhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHHH
Confidence 889888 899999999988888888888885 68888888877654
No 367
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.81 E-value=2.2e-20 Score=191.64 Aligned_cols=171 Identities=20% Similarity=0.300 Sum_probs=119.5
Q ss_pred CCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCCCCCCCCCCcEEE
Q 047901 24 SFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFPPICNLSNLKYIS 103 (786)
Q Consensus 24 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~ 103 (786)
.+.++..+++++|.++++. .+..+++|++|++++|+|+.+ + .+..+++|++|+|++|+|+++++ +..+++|++|+
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~L~~N~i~~~~~-l~~l~~L~~L~ 91 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQSL-A-GMQFFTNLKELHLSHNQISDLSP-LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG-GTTCSSCCEEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcccc-h-HHhhCCCCCEEECCCCccCCChh-hccCCCCCEEE
Confidence 3556777788888886554 577888888888888888754 3 67888888888888888887766 77888888888
Q ss_pred ccCCcCcccCchhhcccCCcceeccccccccccCChhhhccCccceeecccccccCCCCCcCCCCCCcEEEccCcccccc
Q 047901 104 LHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGN 183 (786)
Q Consensus 104 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~ 183 (786)
|++|+++++.+ +.. ++|++|+|++|++++. ..+ .++++|+.|++++|+|+++
T Consensus 92 L~~N~l~~l~~--~~~-~~L~~L~L~~N~l~~~--~~l-----------------------~~l~~L~~L~Ls~N~i~~~ 143 (263)
T 1xeu_A 92 VNRNRLKNLNG--IPS-ACLSRLFLDNNELRDT--DSL-----------------------IHLKNLEILSIRNNKLKSI 143 (263)
T ss_dssp CCSSCCSCCTT--CCC-SSCCEEECCSSCCSBS--GGG-----------------------TTCTTCCEEECTTSCCCBC
T ss_pred CCCCccCCcCc--ccc-CcccEEEccCCccCCC--hhh-----------------------cCcccccEEECCCCcCCCC
Confidence 88888886543 222 7788888888887742 123 3445555555555555544
Q ss_pred cCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCC
Q 047901 184 ISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGR 231 (786)
Q Consensus 184 ~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~ 231 (786)
. .+..+++|++|+|++|+|+++ ..+..+++|+.|++++|++...
T Consensus 144 ~--~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 144 V--MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp G--GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred h--HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 2 466667777777777777665 5566777777777777777643
No 368
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.80 E-value=4.8e-20 Score=196.15 Aligned_cols=260 Identities=15% Similarity=0.066 Sum_probs=173.5
Q ss_pred CCCCcEEECCCCCcc--ccCchhccCCCCCCEEeCcCCcccccCCccccC--------CCCCCEEeCCCccCcccCCC-C
Q 047901 25 FPHLAYLDLSINGFF--GTLPPQVRNLSKLKYLDLSENELSGKIPPEIGL--------LTHLFSLDLSLNQFSGTFPP-I 93 (786)
Q Consensus 25 l~~L~~L~L~~n~i~--~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~--------l~~L~~L~Ls~N~l~~~~~~-~ 93 (786)
+++|++|||++|+|. ...+..+. .++.+.+..|. +.+.+|.+ +++|+.|+|++ .++.+.+. |
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~---~~~~~~~~~~~---I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF 120 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYP---NGKFYIYMANF---VPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAF 120 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSG---GGCCEEECTTE---ECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTT
T ss_pred hccCeEEecCcceeEEecCcccccc---ccccccccccc---cCHHHhcccccccccccCCCcEEECCc-cccchhHHHh
Confidence 788999999999997 33333333 25666677773 45677888 99999999998 88877664 8
Q ss_pred CCCCCCcEEEccCCcCcccCchhhcccCCcceeccccccc----cccCChhhhccCccc-eeeccccccc-C-CCCCcCC
Q 047901 94 CNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQF----TGQLPRNICRSGLLE-ILTVNDNHFL-G-SIPNLRN 166 (786)
Q Consensus 94 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l----~~~~~~~~~~~~~L~-~L~l~~N~l~-~-~~~~l~~ 166 (786)
.++++|++|+|++|.+..+.+.+|.++.++..+.+..+.. ......+|.+...|+ .+.+....-. . ....-..
T Consensus 121 ~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~ 200 (329)
T 3sb4_A 121 KGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQ 200 (329)
T ss_dssp TTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCC
T ss_pred hcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccC
Confidence 8899999999999999888889999888888887776422 223444565555655 3333321100 0 0000112
Q ss_pred CCCCcEEEccCcccccccCccc-CCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCcccc-E
Q 047901 167 CRSLVRAHLGRNNLTGNISEDF-GIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLH-V 244 (786)
Q Consensus 167 l~~L~~L~L~~N~l~~~~~~~f-~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~-~ 244 (786)
..++..+.+.++-.. .....+ ..+++|++|+|++|+++.+.+.+|.++++|++|+|++| ++.+.+.+|.++++|+ .
T Consensus 201 ~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~ 278 (329)
T 3sb4_A 201 PRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGT 278 (329)
T ss_dssp GGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEE
T ss_pred ccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEE
Confidence 344455555443211 111111 23677777777777777777777777777777777776 6666677777777777 7
Q ss_pred EEeecccccccCCCCcccccccccccccccccCCCCccccccCCcCceec
Q 047901 245 LDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFD 294 (786)
Q Consensus 245 L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 294 (786)
|++.+ .++.+.+.+|.++++|+.|++++|.++.+.+.+|.++++|+.++
T Consensus 279 l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 279 LELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 77777 66666677777777777777777777777777777777777765
No 369
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.80 E-value=5.5e-19 Score=177.31 Aligned_cols=135 Identities=24% Similarity=0.274 Sum_probs=73.5
Q ss_pred CCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCCCCcccccccccccc
Q 047901 192 PNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLIL 271 (786)
Q Consensus 192 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L 271 (786)
++|++|+|++|+|+++.+..|..+++|+.|+|++|+|+.+.+..|.++++|+.|+|++|+|+++.+..|..+++|+.|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 44555555555555555555555555555555555555444444555555555555555555444444555555555555
Q ss_pred cccccCCCCccccccCCcCceeccccccccccchhhhhcccCCcEEEecccccCCC
Q 047901 272 RGNQLSGHLPRALGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQE 327 (786)
Q Consensus 272 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 327 (786)
++|+|+ .+|..+..+++|+.|+|++|+|+.+++..|..+++|+.|+|++|.+...
T Consensus 120 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 120 CCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp CSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred cCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 555555 3344455555566666666665555555555566666666666666543
No 370
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.79 E-value=4.2e-22 Score=226.28 Aligned_cols=204 Identities=17% Similarity=0.135 Sum_probs=150.5
Q ss_pred CCCCCCcEEEccCCcCcccCchhhcccCCcceecccccc-------------ccccCChhhhccCccceee-cccccccC
Q 047901 94 CNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQ-------------FTGQLPRNICRSGLLEILT-VNDNHFLG 159 (786)
Q Consensus 94 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-------------l~~~~~~~~~~~~~L~~L~-l~~N~l~~ 159 (786)
..+++|+.|+|++|+|+ .+|..++++++|+.|++++|. +.+..|..+..+++|+.|+ ++.|.+
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~-- 422 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL-- 422 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH--
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc--
Confidence 44666666777777766 446666777777777766654 4456667777777777777 666654
Q ss_pred CCCCcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCC
Q 047901 160 SIPNLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNS 239 (786)
Q Consensus 160 ~~~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 239 (786)
.+|..+.+.+|.|+.+.+ ..|+.|+|++|+|+++ |. |..+++|+.|+|++|+|+ .+|..|.++
T Consensus 423 --------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~l-p~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l 485 (567)
T 1dce_A 423 --------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTVL-CH-LEQLLLVTHLDLSHNRLR-ALPPALAAL 485 (567)
T ss_dssp --------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSSC-CC-GGGGTTCCEEECCSSCCC-CCCGGGGGC
T ss_pred --------chhhhhhhhcccccccCc------cCceEEEecCCCCCCC-cC-ccccccCcEeecCccccc-ccchhhhcC
Confidence 345556677777776543 2478888888888875 44 888888888888888888 567788888
Q ss_pred ccccEEEeecccccccCCCCcccccccccccccccccCCCC-ccccccCCcCceeccccccccccchh---hhhcccCCc
Q 047901 240 SQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHL-PRALGLLTELEYFDLSSNRLNNSILE---ALGFMFKLF 315 (786)
Q Consensus 240 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~~---~~~~l~~L~ 315 (786)
++|+.|+|++|+|++ +| .|..+++|+.|+|++|+|+++. |..|..+++|+.|+|++|++++.++. .+..+++|+
T Consensus 486 ~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~ 563 (567)
T 1dce_A 486 RCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVS 563 (567)
T ss_dssp TTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCS
T ss_pred CCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccC
Confidence 888888888888886 45 7888888888888888888776 88888888888888888888876543 345578888
Q ss_pred EEEe
Q 047901 316 YLNF 319 (786)
Q Consensus 316 ~L~L 319 (786)
.|++
T Consensus 564 ~L~l 567 (567)
T 1dce_A 564 SILT 567 (567)
T ss_dssp EEEC
T ss_pred ccCC
Confidence 8864
No 371
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.79 E-value=1.4e-21 Score=221.94 Aligned_cols=203 Identities=21% Similarity=0.173 Sum_probs=119.7
Q ss_pred cccCCcceeccccccccccCChhhhccCccceeecccccc-------------cCCCC-CcCCCCCCcEEE-ccCccccc
Q 047901 118 GNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHF-------------LGSIP-NLRNCRSLVRAH-LGRNNLTG 182 (786)
Q Consensus 118 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l-------------~~~~~-~l~~l~~L~~L~-L~~N~l~~ 182 (786)
...++|+.|+|++|+++ .+|..+..++.|+.|++++|.. .+.++ .+.++++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 45566777777777776 5677777777777777755531 11111 122333333333 2222221
Q ss_pred ccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCCCCccc
Q 047901 183 NISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGR 262 (786)
Q Consensus 183 ~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~ 262 (786)
+|+.+.+++|.|+.+.+ ..|+.|+|++|+|++ +|. |..+++|+.|+|++|.|+ .+|..|.+
T Consensus 424 ----------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 424 ----------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp ----------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGG
T ss_pred ----------hhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhc
Confidence 22333344444443322 136677777777775 344 667777777777777776 55666777
Q ss_pred ccccccccccccccCCCCccccccCCcCceeccccccccccc-hhhhhcccCCcEEEecccccCCCcch---HHhhhcCc
Q 047901 263 LISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSI-LEALGFMFKLFYLNFSHNQFSQEIPE---DLALLAHL 338 (786)
Q Consensus 263 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~~---~~~~l~~L 338 (786)
+++|+.|+|++|+|+++ | .|+.+++|+.|+|++|+|+++. +..+..+++|+.|+|++|.+++.+|. .+..+++|
T Consensus 485 l~~L~~L~Ls~N~l~~l-p-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L 562 (567)
T 1dce_A 485 LRCLEVLQASDNALENV-D-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSV 562 (567)
T ss_dssp CTTCCEEECCSSCCCCC-G-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTC
T ss_pred CCCCCEEECCCCCCCCC-c-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCccc
Confidence 77777777777777653 3 5667777777777777777665 66677777777777777777655442 23446666
Q ss_pred Ceeec
Q 047901 339 SELDL 343 (786)
Q Consensus 339 ~~L~L 343 (786)
+.|++
T Consensus 563 ~~L~l 567 (567)
T 1dce_A 563 SSILT 567 (567)
T ss_dssp SEEEC
T ss_pred CccCC
Confidence 66653
No 372
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.79 E-value=2.7e-18 Score=186.55 Aligned_cols=267 Identities=11% Similarity=0.034 Sum_probs=212.2
Q ss_pred ccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCCC-CCCCCCCcEEEccCCcCcccCchhhcccCCcc
Q 047901 46 VRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFPP-ICNLSNLKYISLHNNKLSGSIPEEIGNLMKLS 124 (786)
Q Consensus 46 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 124 (786)
+.....++.+.+.++ ++.+...+|.+. +|+.+.|..| ++.+... |.+ .+|+.+.|.+ .++.+...+|.++++|+
T Consensus 109 ~~~~~~l~~i~ip~~-i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~ 183 (401)
T 4fdw_A 109 TEILKGYNEIILPNS-VKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLK 183 (401)
T ss_dssp EEECSSCSEEECCTT-CCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCC
T ss_pred EEecCCccEEEECCc-cCEehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCC
Confidence 445678888888764 666888888874 7999998877 6666553 656 4788998885 77778888899999999
Q ss_pred eeccccccccccCChhhhccCccceeecccccccCCCC-CcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCc
Q 047901 125 YLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIP-NLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNN 203 (786)
Q Consensus 125 ~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~-~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~ 203 (786)
.+++++|+++.....+|. ..+|+.+.+..+ ++.+.. .|.+|++|+.+.+..| ++.+...+|.+ .+|+.+.| .|.
T Consensus 184 ~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~ 258 (401)
T 4fdw_A 184 KADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNG 258 (401)
T ss_dssp EEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETT
T ss_pred eeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCC
Confidence 999998888866666666 578888888755 555443 4788888999998875 77788888888 78999998 466
Q ss_pred cccccCcCccCCCCccEEEccCcccC-----CCCCccccCCccccEEEeecccccccCCCCcccccccccccccccccCC
Q 047901 204 FYGEISSNWGKCHRLGTLIVSGNNIT-----GRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSG 278 (786)
Q Consensus 204 i~~~~~~~~~~l~~L~~L~L~~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 278 (786)
++.+...+|.++++|+.+++.+|.+. .+.+.+|.++++|+.++|. +.++.+...+|.++++|+.+.|..| ++.
T Consensus 259 i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~ 336 (401)
T 4fdw_A 259 VTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQ 336 (401)
T ss_dssp CCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCE
T ss_pred ccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccE
Confidence 77788888999999999998888765 4667788888999999998 4577777888888889999998655 777
Q ss_pred CCccccccCCcCceeccccccccccchhhhhccc-CCcEEEecccccC
Q 047901 279 HLPRALGLLTELEYFDLSSNRLNNSILEALGFMF-KLFYLNFSHNQFS 325 (786)
Q Consensus 279 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~ 325 (786)
+...+|.++ +|+.+++++|.+..+....|..++ .++.|++..+.+.
T Consensus 337 I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 337 INFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp ECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred EcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 788888888 899999999988888888888874 6788888877664
No 373
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=1e-18 Score=175.40 Aligned_cols=151 Identities=21% Similarity=0.165 Sum_probs=77.6
Q ss_pred ceeecccccccCCCCCcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcc
Q 047901 148 EILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNN 227 (786)
Q Consensus 148 ~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~ 227 (786)
+.++++++.++.++..+. ++|+.|+|++|+|+++.+..|..+++|++|+|++|+|+.+.+..|..+++|+.|+|++|+
T Consensus 22 ~~v~c~~~~l~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~ 99 (229)
T 3e6j_A 22 TTVDCRSKRHASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQ 99 (229)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEeEccCCCcCccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCc
Confidence 344555555544444333 445555555555555555555555555555555555555444455555555555555555
Q ss_pred cCCCCCccccCCccccEEEeecccccccCCCCcccccccccccccccccCCCCccccccCCcCceecccccccc
Q 047901 228 ITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLN 301 (786)
Q Consensus 228 l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 301 (786)
|+++.+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|+++.+..|..+++|+.|+|++|++.
T Consensus 100 l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 100 LTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBC
T ss_pred CCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCcc
Confidence 55444444555555555555555555 34444555555555555555555444444555555555555555544
No 374
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.77 E-value=6.1e-19 Score=172.66 Aligned_cols=107 Identities=15% Similarity=0.260 Sum_probs=60.6
Q ss_pred cCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCCCCCCCCCCcEEEccCCcCcccCchhhcccCCccee
Q 047901 47 RNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFPPICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYL 126 (786)
Q Consensus 47 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 126 (786)
..+++|++|++++|+|+. .| .+..+++|++|++++|.++.. +.+..+++|++|+|++|++++..+..|.++++|++|
T Consensus 41 ~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~n~~~~~-~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 117 (197)
T 4ezg_A 41 AQMNSLTYITLANINVTD-LT-GIEYAHNIKDLTINNIHATNY-NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLL 117 (197)
T ss_dssp HHHHTCCEEEEESSCCSC-CT-TGGGCTTCSEEEEESCCCSCC-GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEE
T ss_pred hhcCCccEEeccCCCccC-hH-HHhcCCCCCEEEccCCCCCcc-hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEE
Confidence 445556666666666652 23 456666666666666655432 245556666666666666665555556666666666
Q ss_pred ccccccccccCChhhhccCccceeeccccc
Q 047901 127 MLDTNQFTGQLPRNICRSGLLEILTVNDNH 156 (786)
Q Consensus 127 ~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~ 156 (786)
++++|++++..|..+..+++|+.|++++|.
T Consensus 118 ~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~ 147 (197)
T 4ezg_A 118 DISHSAHDDSILTKINTLPKVNSIDLSYNG 147 (197)
T ss_dssp ECCSSBCBGGGHHHHTTCSSCCEEECCSCT
T ss_pred EecCCccCcHhHHHHhhCCCCCEEEccCCC
Confidence 666666665445555444444444444443
No 375
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.76 E-value=1.4e-18 Score=177.68 Aligned_cols=143 Identities=17% Similarity=0.204 Sum_probs=108.7
Q ss_pred ccCccceeeccccCceEEEEEc-CCCCE--EEEEEcCCCCCCC--------------------chhhHHHHHHHHHHHhh
Q 047901 506 KDFDAKYCIGKGEHRSVYRAKL-PSGDK--IAVKKFNSPFPND--------------------QMSDQKEFLNEIKALTK 562 (786)
Q Consensus 506 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~~--------------------~~~~~~~~~~e~~~l~~ 562 (786)
.-|.+.+.||+|+||.||+|.. .+|+. ||||+++...... .......+.+|+.++..
T Consensus 47 ~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 126 (258)
T 1zth_A 47 YITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLER 126 (258)
T ss_dssp SEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHH
T ss_pred CchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHH
Confidence 3467888999999999999987 67888 9999976531110 00112367899999999
Q ss_pred cCCCcc--cceeeEEecCCeeeEEEeccCC-C----CHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHh-hCCCCCeE
Q 047901 563 IRHRNI--VKFYGFCSHVRHSFVVYEYINR-G----SLATVLSNNFASEDFDWRKRMNVITGVADALSYMH-HDCFPPIV 634 (786)
Q Consensus 563 l~hpni--v~l~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH-~~~~~~iv 634 (786)
+.|+++ ..++++ +..++||||+.+ | +|.++... .++..+..++.|++.|+.||| +. +|+
T Consensus 127 l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~---giv 193 (258)
T 1zth_A 127 AKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQEA---ELV 193 (258)
T ss_dssp HHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHTS---CEE
T ss_pred HHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHHC---CEE
Confidence 988864 334432 356899999942 4 67666432 123456789999999999999 88 999
Q ss_pred EcCCCCCceeeCCCCcEEEeccccceecC
Q 047901 635 HRDISSNNVLLDLEYEARVSDFGTAKLLK 663 (786)
Q Consensus 635 Hrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 663 (786)
||||||+|||++. .++|+|||+|....
T Consensus 194 HrDlkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 194 HADLSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp CSSCSTTSEEESS--SEEECCCTTCEETT
T ss_pred eCCCCHHHEEEcC--cEEEEECcccccCC
Confidence 9999999999998 99999999998664
No 376
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.76 E-value=2.1e-17 Score=180.36 Aligned_cols=331 Identities=12% Similarity=0.024 Sum_probs=170.8
Q ss_pred CCcCccCCCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCC-CCCC
Q 047901 17 LQEFSFSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFP-PICN 95 (786)
Q Consensus 17 l~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~ 95 (786)
|.+.+|.++.+|+.+.|.. .++.+...+|.++++|+.++|.++ ++.+...+|.++.+|+.+.+..+ +..+.. .|.+
T Consensus 62 Ig~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~ 138 (394)
T 4fs7_A 62 IGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKG 138 (394)
T ss_dssp ECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTT
T ss_pred hHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeec
Confidence 5556666666677776653 365666666666666777766544 55466666666666666665544 222222 2444
Q ss_pred CCCCcEEEccCCcCcccCchhhcccCCcceeccccccccccCChhhhccCccceeecccccccCCCCCcCCCCCCcEEEc
Q 047901 96 LSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSLVRAHL 175 (786)
Q Consensus 96 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L 175 (786)
+..++.... +.+..+...+|.++++|+.+.+..+. +.....+|.+..+|+.+.+..|
T Consensus 139 ~~~~~~~~~--~~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-------------------- 195 (394)
T 4fs7_A 139 CDFKEITIP--EGVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-------------------- 195 (394)
T ss_dssp CCCSEEECC--TTCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT--------------------
T ss_pred ccccccccC--ccccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC--------------------
Confidence 433222221 22223444556666666666665432 2244444444444554444433
Q ss_pred cCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeeccccccc
Q 047901 176 GRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGE 255 (786)
Q Consensus 176 ~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~ 255 (786)
++.+...+|.+...|+.+.+..+... +. +.+....+|+.+.+..+ ++.+....|.+...|+.+.+..+... +
T Consensus 196 ----~~~I~~~~F~~~~~L~~i~~~~~~~~-i~-~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i 267 (394)
T 4fs7_A 196 ----LKIIRDYCFAECILLENMEFPNSLYY-LG-DFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-I 267 (394)
T ss_dssp ----CCEECTTTTTTCTTCCBCCCCTTCCE-EC-TTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-E
T ss_pred ----ceEeCchhhccccccceeecCCCceE-ee-hhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-e
Confidence 33344445555555555554443322 21 12222344555555432 22233445555555555555544332 4
Q ss_pred CCCCcccccccccccccccccCCCCccccccCCcCceeccccccccccchhhhhcccCCcEEEecccccCCCcchHHhhh
Q 047901 256 IPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQEIPEDLALL 335 (786)
Q Consensus 256 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 335 (786)
...+|.....++.+.+..+.+ ....|..+.+|+.+.+..+ ++.+...+|.++.+|+.++|.++ ++.+...+|.++
T Consensus 268 ~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c 342 (394)
T 4fs7_A 268 GGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGC 342 (394)
T ss_dssp CSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTC
T ss_pred eccccccccccceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCC
Confidence 444555555555555544432 2234555556666555443 55555556666666666666433 444455566666
Q ss_pred cCcCeeeccCCccCCCCCcccccccccceeccccccccccCCcccccCCCceEE
Q 047901 336 AHLSELDLSHNLFKGSIPSRICNLESLEKLNLSHNNISGQIPACFIGMSGLLSI 389 (786)
Q Consensus 336 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 389 (786)
.+|+.+++..| ++.+...+|.++.+|+.+++..+ ++. ...+|.+.++|+.+
T Consensus 343 ~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~~-~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 343 TSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LEQ-YRYDFEDTTKFKWI 393 (394)
T ss_dssp TTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GGG-GGGGBCTTCEEEEE
T ss_pred CCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CEE-hhheecCCCCCcEE
Confidence 66666666555 55455566666666776666544 332 23456666666543
No 377
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.76 E-value=1.8e-18 Score=169.25 Aligned_cols=152 Identities=17% Similarity=0.191 Sum_probs=79.0
Q ss_pred CCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCCCCccccccccc
Q 047901 189 GIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNK 268 (786)
Q Consensus 189 ~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~ 268 (786)
..+++|++|++++|.|+.+. .+..+++|++|++++|.++. +..+..+++|+.|++++|.+++..+..|..+++|+.
T Consensus 41 ~~l~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVTDLT--GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCSCCT--TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCccChH--HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 33456666666666666333 35556666666666665542 235556666666666666666555555555555555
Q ss_pred ccccccccCCCCccccccCCcCceecccccc-ccccchhhhhcccCCcEEEecccccCCCcchHHhhhcCcCeeeccCCc
Q 047901 269 LILRGNQLSGHLPRALGLLTELEYFDLSSNR-LNNSILEALGFMFKLFYLNFSHNQFSQEIPEDLALLAHLSELDLSHNL 347 (786)
Q Consensus 269 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 347 (786)
|+|++|++++..+..+..+++|+.|++++|+ +..++ .+..+++|++|++++|.+++.. .+..+++|+.|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~--~l~~l~~L~~L~l~~n~i~~~~--~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM--PLKTLPELKSLNIQFDGVHDYR--GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG--GGGGCSSCCEEECTTBCCCCCT--TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH--hhcCCCCCCEEECCCCCCcChH--HhccCCCCCEEEeeCcc
Confidence 5555555554444555555555555555554 44332 3444444444444444443321 33444444444444444
Q ss_pred c
Q 047901 348 F 348 (786)
Q Consensus 348 l 348 (786)
|
T Consensus 193 i 193 (197)
T 4ezg_A 193 I 193 (197)
T ss_dssp -
T ss_pred c
Confidence 3
No 378
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.75 E-value=3.8e-19 Score=208.38 Aligned_cols=197 Identities=19% Similarity=0.150 Sum_probs=83.9
Q ss_pred CCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCCCCCCCCCCcEEEc
Q 047901 25 FPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFPPICNLSNLKYISL 104 (786)
Q Consensus 25 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L 104 (786)
-+.++.|+|.+|.+..+ +. ..|+.++|++|.|.. ++++.|++...+..+..+++|+.|+|
T Consensus 172 ~~~~~~l~L~~n~~~~~-~~-----~~l~~l~Ls~~~i~~--------------~~~~~n~~~~~~~~~~~l~~L~~L~L 231 (727)
T 4b8c_D 172 TPLTPKIELFANGKDEA-NQ-----ALLQHKKLSQYSIDE--------------DDDIENRMVMPKDSKYDDQLWHALDL 231 (727)
T ss_dssp ----------------------------------------------------------------------CCCCCCEEEC
T ss_pred CCccceEEeeCCCCCcc-hh-----hHhhcCccCcccccC--------------ccccccceecChhhhccCCCCcEEEC
Confidence 35566677766666542 21 124445555555442 23444554433334566666666666
Q ss_pred cCCcCcccCchhhcccCCcceeccccccccccCChhhhccCccceeecccccccCCCCCcCCCCCCcEEEccCccccccc
Q 047901 105 HNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNI 184 (786)
Q Consensus 105 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~ 184 (786)
++|+|..+++ .+.++++|++|+|++|.|+ .+|..|..+++|+.|+|++|+|+.++..+.++++|+.|+|++|.|+.+
T Consensus 232 s~n~l~~l~~-~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~~l- 308 (727)
T 4b8c_D 232 SNLQIFNISA-NIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMVTTL- 308 (727)
T ss_dssp TTSCCSCCCG-GGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTTCSEEECCSSCCCCC-
T ss_pred CCCCCCCCCh-hhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCccChhhcCCCCCCEEECCCCCCCcc-
Confidence 6666664333 3336666777777777666 556666666666666666666665544566666666666666666644
Q ss_pred CcccCCCCCCCEEeccCCccccccCcCccCCCC-ccEEEccCcccCCCCCccccCCccccEEEeecc
Q 047901 185 SEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHR-LGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSN 250 (786)
Q Consensus 185 ~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 250 (786)
|..|+.+++|++|+|++|.|++.+|..+..+.. +..|+|++|.+++.+|. .|..|+++.|
T Consensus 309 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~------~l~~l~l~~n 369 (727)
T 4b8c_D 309 PWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH------ERRFIEINTD 369 (727)
T ss_dssp CSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC------C---------
T ss_pred ChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc------ccceeEeecc
Confidence 334666777777777777776666665544321 22356666666655543 3344455554
No 379
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.75 E-value=2.4e-17 Score=179.89 Aligned_cols=318 Identities=10% Similarity=0.002 Sum_probs=225.8
Q ss_pred ccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCCCCCCCCCCcEEEccCCcCcccCchhh
Q 047901 38 FFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFPPICNLSNLKYISLHNNKLSGSIPEEI 117 (786)
Q Consensus 38 i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 117 (786)
++.+...+|.++.+|+.+.|..+ ++.+...+|.++++|+.++|..| ++.+...+|
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~------------------------l~~I~~~aF 113 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS------------------------VKMIGRCTF 113 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT------------------------CCEECTTTT
T ss_pred EeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC------------------------ceEccchhh
Confidence 44445555555555555555432 44455555555555555555433 333444444
Q ss_pred cccCCcceeccccccccccCChhhhccCccceeecccccccCCCCCcCCCCCCcEEEccCcccccccCcccCCCCCCCEE
Q 047901 118 GNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFL 197 (786)
Q Consensus 118 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L 197 (786)
.++.+|+.+.+..+ ++.....+|.+...++.......... ....+.++++|+.+.+..+ +..+....|.++++|+.+
T Consensus 114 ~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~~~~~~~~~~~i-~~~aF~~c~~L~~i~l~~~-~~~I~~~~F~~c~~L~~i 190 (394)
T 4fs7_A 114 SGCYALKSILLPLM-LKSIGVEAFKGCDFKEITIPEGVTVI-GDEAFATCESLEYVSLPDS-METLHNGLFSGCGKLKSI 190 (394)
T ss_dssp TTCTTCCCCCCCTT-CCEECTTTTTTCCCSEEECCTTCCEE-CTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCBC
T ss_pred cccccchhhcccCc-eeeecceeeecccccccccCcccccc-chhhhcccCCCcEEecCCc-cceeccccccCCCCceEE
Confidence 44444444444332 22233334443332222222111111 1224677888888888755 455888999999999999
Q ss_pred eccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCCCCcccccccccccccccccC
Q 047901 198 DLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLS 277 (786)
Q Consensus 198 ~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 277 (786)
++..| ++.+...+|.++..|+.+.+..+... + ...+....+|+.+.+..+ ++.+...+|.....|+.+.+..+...
T Consensus 191 ~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~-i-~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~ 266 (394)
T 4fs7_A 191 KLPRN-LKIIRDYCFAECILLENMEFPNSLYY-L-GDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR 266 (394)
T ss_dssp CCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE-E-CTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE
T ss_pred EcCCC-ceEeCchhhccccccceeecCCCceE-e-ehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce
Confidence 99887 77788999999999999999877654 3 344455678999999754 44477788999999999999888654
Q ss_pred CCCccccccCCcCceeccccccccccchhhhhcccCCcEEEecccccCCCcchHHhhhcCcCeeeccCCccCCCCCcccc
Q 047901 278 GHLPRALGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQEIPEDLALLAHLSELDLSHNLFKGSIPSRIC 357 (786)
Q Consensus 278 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 357 (786)
+....|..+..++.+....+. +....|..+.+|+.+.+.++ ++.+...+|.++.+|+.++|..+ ++.+....|.
T Consensus 267 -i~~~~F~~~~~l~~~~~~~~~---i~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~ 340 (394)
T 4fs7_A 267 -IGGSLFYNCSGLKKVIYGSVI---VPEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFR 340 (394)
T ss_dssp -ECSCTTTTCTTCCEEEECSSE---ECTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTT
T ss_pred -eeccccccccccceeccCcee---eccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhcc
Confidence 778899999999999887765 45678999999999999865 76677789999999999999755 7767778999
Q ss_pred cccccceeccccccccccCCcccccCCCceEEeccCC
Q 047901 358 NLESLEKLNLSHNNISGQIPACFIGMSGLLSIDISYN 394 (786)
Q Consensus 358 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 394 (786)
++.+|+.+++..| ++.+-..+|.++.+|+.+++..+
T Consensus 341 ~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 341 GCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp TCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred CCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 9999999999877 88888899999999999999765
No 380
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.75 E-value=5.4e-19 Score=207.11 Aligned_cols=189 Identities=21% Similarity=0.200 Sum_probs=100.5
Q ss_pred ccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCCCCcccccccccccccccccCC
Q 047901 199 LSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSG 278 (786)
Q Consensus 199 L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 278 (786)
++.|++. +.++.|..+++|+.|+|++|.+. .+|..+..+++|+.|+|++|.|+ .+|..|.++++|+.|+|++|+|+
T Consensus 208 ~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~- 283 (727)
T 4b8c_D 208 DIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT- 283 (727)
T ss_dssp ---------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-
T ss_pred cccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-
Confidence 3334444 45666777777777777777777 45555557777777777777777 56677777777777777777777
Q ss_pred CCccccccCCcCceeccccccccccchhhhhcccCCcEEEecccccCCCcchHHhhhcC-cCeeeccCCccCCCCCcccc
Q 047901 279 HLPRALGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQEIPEDLALLAH-LSELDLSHNLFKGSIPSRIC 357 (786)
Q Consensus 279 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~~~ 357 (786)
.+|..|..+++|+.|+|++|.|+.++.. |..+++|+.|+|++|.|++.+|..+..+.. +..|+|++|.+++.+|..
T Consensus 284 ~lp~~~~~l~~L~~L~L~~N~l~~lp~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~-- 360 (727)
T 4b8c_D 284 SLPAELGSCFQLKYFYFFDNMVTTLPWE-FGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE-- 360 (727)
T ss_dssp SCCSSGGGGTTCSEEECCSSCCCCCCSS-TTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--
T ss_pred ccChhhcCCCCCCEEECCCCCCCccChh-hhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc--
Confidence 4466677777777777777777765443 777777777788888777777777655432 234778888888766653
Q ss_pred cccccceeccccc--------cccccCCcccccCCCceEEeccCCcccc
Q 047901 358 NLESLEKLNLSHN--------NISGQIPACFIGMSGLLSIDISYNELRG 398 (786)
Q Consensus 358 ~l~~L~~L~L~~N--------~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 398 (786)
|+.|++++| .|.+..+..+..+..+....+++|-+..
T Consensus 361 ----l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 361 ----RRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLCQ 405 (727)
T ss_dssp ---------------------------------------------CCCG
T ss_pred ----cceeEeecccccccccCCccccccchhhcccccceeeeecccccc
Confidence 445566666 3444444455556666666777777654
No 381
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.70 E-value=3.8e-17 Score=158.96 Aligned_cols=127 Identities=24% Similarity=0.213 Sum_probs=58.2
Q ss_pred cEEEccCcccccccCcccCCCCCCCEEeccCCccccccCc-CccCCCCccEEEccCcccCCCCCccccCCccccEEEeec
Q 047901 171 VRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISS-NWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSS 249 (786)
Q Consensus 171 ~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 249 (786)
+.+++++|+|+.++...+ ++|++|+|++|+|+++.+. .|..+++|++|+|++|+|+++.|..|.++++|+.|+|++
T Consensus 11 ~~l~~s~~~l~~ip~~~~---~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLKEIPRDIP---LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCSSCCSCCC---TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcCcCccCCC---CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 345555555554433221 2455555555555544443 244455555555555555544444444444444444444
Q ss_pred ccccccCCCCcccccccccccccccccCCCCccccccCCcCceeccccccc
Q 047901 250 NHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRL 300 (786)
Q Consensus 250 N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 300 (786)
|+|++..+..|.++++|+.|+|++|+|+++.|..|..+++|+.|+|++|++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 138 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPF 138 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCB
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCc
Confidence 444444444444444444444444444444344444444443333333333
No 382
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.70 E-value=1.8e-17 Score=161.27 Aligned_cols=128 Identities=17% Similarity=0.199 Sum_probs=63.9
Q ss_pred CEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCc-cccCCccccEEEeecccccccCCCCcccccccccccccc
Q 047901 195 KFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPP-EIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRG 273 (786)
Q Consensus 195 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~ 273 (786)
+++++++|+++.++...+ .+|++|+|++|+|+++.+. .|..+++|+.|+|++|+|++..|..|.++++|+.|+|++
T Consensus 11 ~~l~~s~~~l~~ip~~~~---~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLKEIPRDIP---LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCSSCCSCCC---TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcCcCccCCC---CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 556666666654332221 1555555555555544432 255555555555555555555455555555555555555
Q ss_pred cccCCCCccccccCCcCceeccccccccccchhhhhcccCCcEEEecccccC
Q 047901 274 NQLSGHLPRALGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFS 325 (786)
Q Consensus 274 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 325 (786)
|+|+++.+..|.++++|+.|+|++|+++++.+..|..+++|++|+|++|.++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 139 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCcc
Confidence 5555444444544555555555555444444444444444444444444443
No 383
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.69 E-value=3.2e-17 Score=155.92 Aligned_cols=137 Identities=22% Similarity=0.130 Sum_probs=108.2
Q ss_pred CCCCCcEEECCCCCcc-ccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCCC-CCCCCCCcE
Q 047901 24 SFPHLAYLDLSINGFF-GTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFPP-ICNLSNLKY 101 (786)
Q Consensus 24 ~l~~L~~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~ 101 (786)
..++|++|+|++|+++ +..|..|..+++|++|+|++|+|+.+ ..|..+++|++|+|++|++++..+. +..+++|++
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 3477888888888886 46677788888888888888888865 6788888888888888888875444 455888888
Q ss_pred EEccCCcCcccCc-hhhcccCCcceeccccccccccCC---hhhhccCccceeecccccccCCCC
Q 047901 102 ISLHNNKLSGSIP-EEIGNLMKLSYLMLDTNQFTGQLP---RNICRSGLLEILTVNDNHFLGSIP 162 (786)
Q Consensus 102 L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~~~~L~~L~l~~N~l~~~~~ 162 (786)
|+|++|+|+++.. ..|..+++|++|++++|++++..+ ..+..+++|+.|++++|.+...+.
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~ 164 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAPD 164 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBCCS
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhccc
Confidence 8888888886543 678888888888888888886655 478888888888888888776544
No 384
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.67 E-value=3e-16 Score=152.62 Aligned_cols=125 Identities=28% Similarity=0.347 Sum_probs=81.8
Q ss_pred EEEcCCCCCcccCCcCccCCCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCc
Q 047901 5 SINLTSTGLKGTLQEFSFSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLN 84 (786)
Q Consensus 5 ~l~l~~~~l~~~l~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 84 (786)
.++++++++. .+|... .++|++|+|++|+|+ .+|..|.++++|++|+|++|+|+++.+.+|..+++|++|+|++|
T Consensus 14 ~l~~~~~~l~-~ip~~~---~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGI---PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EEECTTSCCS-SCCSCC---CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEEcCCCCCC-cCCCCC---CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 4566666665 555432 246677777777765 34466667777777777777776666666777777777777777
Q ss_pred cCcccCCC-CCCCCCCcEEEccCCcCcccCchhhcccCCcceecccccccc
Q 047901 85 QFSGTFPP-ICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQFT 134 (786)
Q Consensus 85 ~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 134 (786)
+|+++++. |..+++|++|+|++|+|+.+++..|..+++|++|+|++|.+.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 77666553 666667777777777776666666666667777777766665
No 385
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.67 E-value=1.4e-16 Score=151.39 Aligned_cols=132 Identities=22% Similarity=0.183 Sum_probs=58.6
Q ss_pred CCCCEEeccCCccc-cccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCCCCccccccccccc
Q 047901 192 PNLKFLDLSHNNFY-GEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLI 270 (786)
Q Consensus 192 ~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~ 270 (786)
++|++|+|++|+++ +..|..+..+++|+.|+|++|.|+++ ..+..+++|+.|+|++|+++
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~----------------- 84 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIF----------------- 84 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCC-----------------
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCc-----------------
Confidence 45555555555554 23333344444444444444444432 33444444444444444443
Q ss_pred ccccccCCCCccccccCCcCceeccccccccccch-hhhhcccCCcEEEecccccCCCcc---hHHhhhcCcCeeeccCC
Q 047901 271 LRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSIL-EALGFMFKLFYLNFSHNQFSQEIP---EDLALLAHLSELDLSHN 346 (786)
Q Consensus 271 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~L~~N 346 (786)
+.+|..+..+++|+.|++++|+++.++. ..+..+++|++|++++|.+++..+ ..+..+++|+.|++++|
T Consensus 85 -------~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n 157 (168)
T 2ell_A 85 -------GGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDR 157 (168)
T ss_dssp -------SCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEET
T ss_pred -------hHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCC
Confidence 3333333344444444444444444322 334444444444444444443333 24444555555555555
Q ss_pred ccC
Q 047901 347 LFK 349 (786)
Q Consensus 347 ~l~ 349 (786)
.+.
T Consensus 158 ~~~ 160 (168)
T 2ell_A 158 EDQ 160 (168)
T ss_dssp TSC
T ss_pred Chh
Confidence 444
No 386
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.67 E-value=8.5e-17 Score=149.63 Aligned_cols=129 Identities=22% Similarity=0.170 Sum_probs=101.3
Q ss_pred CCCCCcEEECCCCCcc-ccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCC-CCCCCCCCcE
Q 047901 24 SFPHLAYLDLSINGFF-GTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFP-PICNLSNLKY 101 (786)
Q Consensus 24 ~l~~L~~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~ 101 (786)
..++|+.|++++|.++ +..|..+..+++|++|+|++|+|+++ ..|..+++|++|+|++|++++..+ .+..+++|++
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 3477888888888886 56677788888888888888888865 678888888888888888887444 3556888888
Q ss_pred EEccCCcCccc-CchhhcccCCcceeccccccccccCC---hhhhccCccceeeccc
Q 047901 102 ISLHNNKLSGS-IPEEIGNLMKLSYLMLDTNQFTGQLP---RNICRSGLLEILTVND 154 (786)
Q Consensus 102 L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~~~~L~~L~l~~ 154 (786)
|+|++|+++++ .+..|.++++|++|++++|++++..+ ..+..+++|+.|++++
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 88888888864 34778888888888888888886665 5788888888888763
No 387
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.66 E-value=4.6e-16 Score=149.29 Aligned_cols=129 Identities=23% Similarity=0.215 Sum_probs=100.2
Q ss_pred EEEEcCCCCCcccCCcCccCCCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCC
Q 047901 4 NSINLTSTGLKGTLQEFSFSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSL 83 (786)
Q Consensus 4 ~~l~l~~~~l~~~l~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 83 (786)
+.++++++++. .++... .++|++|+|++|+++++.+..|.++++|++|+|++|+|+++.+..|..+++|++|+|++
T Consensus 10 ~~l~~~~~~l~-~~p~~~---~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGI---PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TEEECCSSCCS-SCCTTC---CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEecCCCCc-cCCCCC---CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 46777877776 455432 36788888888888777777788888888888888888877777778888888888888
Q ss_pred ccCcccCCC-CCCCCCCcEEEccCCcCcccCchhhcccCCcceecccccccccc
Q 047901 84 NQFSGTFPP-ICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQ 136 (786)
Q Consensus 84 N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 136 (786)
|+|+++++. +..+++|++|+|++|+|+++++..|..+++|++|+|++|++++.
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 888877665 67788888888888888877777778888888888888887743
No 388
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.65 E-value=1.4e-16 Score=148.23 Aligned_cols=124 Identities=27% Similarity=0.331 Sum_probs=61.3
Q ss_pred eEEEEcCCCCCc-ccCCcCccCCCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeC
Q 047901 3 VNSINLTSTGLK-GTLQEFSFSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDL 81 (786)
Q Consensus 3 ~~~l~l~~~~l~-~~l~~~~f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 81 (786)
++.|++++|++. +.++. .|..+++|++|+|++|.++++ ..|..+++|++|+|++|+|++..|..+..+++|++|+|
T Consensus 19 l~~L~l~~n~l~~~~~~~-~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 95 (149)
T 2je0_A 19 VKELVLDNSRSNEGKLEG-LTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95 (149)
T ss_dssp CSEEECTTCBCBTTBCCS-CCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEEC
T ss_pred CeEEEccCCcCChhHHHH-HHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEEC
Confidence 445555555554 34443 344555555555555555443 44555555555555555555444444444555555555
Q ss_pred CCccCcccC--CCCCCCCCCcEEEccCCcCcccCc---hhhcccCCcceeccc
Q 047901 82 SLNQFSGTF--PPICNLSNLKYISLHNNKLSGSIP---EEIGNLMKLSYLMLD 129 (786)
Q Consensus 82 s~N~l~~~~--~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~L~ 129 (786)
++|++++.+ ..+..+++|++|++++|+++++++ ..|..+++|++|+++
T Consensus 96 s~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 96 SGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp TTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 555554432 334445555555555555554443 345555555555543
No 389
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.65 E-value=6.3e-16 Score=150.29 Aligned_cols=126 Identities=24% Similarity=0.176 Sum_probs=74.0
Q ss_pred EEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeeccc
Q 047901 172 RAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNH 251 (786)
Q Consensus 172 ~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 251 (786)
.+++++|+|+.++... .++|++|+|++|+|+.+ |..|..+++|+.|+|++|+|+++.+..|.++++|+.|+|++|+
T Consensus 14 ~l~~~~~~l~~ip~~~---~~~l~~L~L~~n~i~~i-p~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLKVLPKGI---PRDVTELYLDGNQFTLV-PKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCSSCCSCC---CTTCCEEECCSSCCCSC-CGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCCcCCCCC---CCCCCEEECCCCcCchh-HHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 3444444444433221 13555666666665532 3555566666666666666665555556666666666666666
Q ss_pred ccccCCCCcccccccccccccccccCCCCccccccCCcCceecccccccc
Q 047901 252 IAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLN 301 (786)
Q Consensus 252 i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 301 (786)
|+++.+..|.++++|+.|+|++|+|+.+.+..|..+++|+.|+|++|++.
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 66555556666666666666666666555556666667777777777665
No 390
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.64 E-value=5e-15 Score=161.45 Aligned_cols=333 Identities=8% Similarity=0.066 Sum_probs=188.9
Q ss_pred cCCcCccCCCC-CCcEEECCCCCccccCchhccCCCCCCEEeCcCCc---ccccCCccccCCCCCCEEeCCCccCcccCC
Q 047901 16 TLQEFSFSSFP-HLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENE---LSGKIPPEIGLLTHLFSLDLSLNQFSGTFP 91 (786)
Q Consensus 16 ~l~~~~f~~l~-~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~---l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 91 (786)
.|.+.+|.+.. .|+.+.+-. .++.+...+|.++.+|+.+.++.|. ++.+...+|..+.+|+.+.+..+ ++.+..
T Consensus 53 ~Ig~~aF~~~~~~L~sI~iP~-svt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~ 130 (394)
T 4gt6_A 53 KIGDRVFCNYKYVLTSVQIPD-TVTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDS 130 (394)
T ss_dssp EECTTTTTTCCSCCCEEEECT-TCCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECT
T ss_pred EcCHhhccCCCCcCEEEEECC-CeeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehh
Confidence 46667788774 588888864 4777888888888888888887764 66677778888888888777655 444443
Q ss_pred -CCCCCCCCcEEEccCCcCcccCchhhcccCCcceeccccccccccCChhhhccCccceeecccccccCCCCCcCCCCCC
Q 047901 92 -PICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSL 170 (786)
Q Consensus 92 -~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L 170 (786)
.|..+.+|+.+.+..+ +..+....|.++.+|+.+.+..+ ++.....+|.+ ..|+.+.+..+...-....+.++.++
T Consensus 131 ~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~i~~~af~~c~~l 207 (394)
T 4gt6_A 131 EAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTRIGTNAFSECFAL 207 (394)
T ss_dssp TTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCEECTTTTTTCTTC
T ss_pred hhhhhhcccccccccce-eeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccccccchhhhcccc
Confidence 4777888888888654 44577778888888888887655 44344444543 45666666554333222334555555
Q ss_pred cEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecc
Q 047901 171 VRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSN 250 (786)
Q Consensus 171 ~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 250 (786)
.......+....+....+........-. ..+.....+..+.+.. .++.+...+|.++.+|+.+.+..+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~ip~-~v~~i~~~aF~~c~~L~~i~lp~~ 275 (394)
T 4gt6_A 208 STITSDSESYPAIDNVLYEKSANGDYAL-----------IRYPSQREDPAFKIPN-GVARIETHAFDSCAYLASVKMPDS 275 (394)
T ss_dssp CEEEECCSSSCBSSSCEEEECTTSCEEE-----------EECCTTCCCSEEECCT-TEEEECTTTTTTCSSCCEEECCTT
T ss_pred ceecccccccccccceeecccccccccc-----------cccccccccceEEcCC-cceEcccceeeecccccEEecccc
Confidence 5555544443322211111110000000 0011112233333322 223344455666666666666544
Q ss_pred cccccCCCCcccccccccccccccccCCCCccccccCCcCceeccccccccccchhhhhcccCCcEEEecccccCCCcch
Q 047901 251 HIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQEIPE 330 (786)
Q Consensus 251 ~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 330 (786)
... +...+|.+..+|+.+.+. +.++.+...+|.++.+|+.+++..+ ++.+...+|.++.+|+.+.+..+ ++.+...
T Consensus 276 ~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~ 351 (394)
T 4gt6_A 276 VVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPES 351 (394)
T ss_dssp CCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGG
T ss_pred cce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHh
Confidence 332 555566666666666664 3444455666666666776666543 56666667777777777777543 5555566
Q ss_pred HHhhhcCcCeeeccCCccCCCCCcccccccccceeccccccc
Q 047901 331 DLALLAHLSELDLSHNLFKGSIPSRICNLESLEKLNLSHNNI 372 (786)
Q Consensus 331 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 372 (786)
+|.++.+|+.+++.+|... . ..|....+|+.+.+..|.+
T Consensus 352 aF~~C~~L~~i~~~~~~~~-~--~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 352 AFSNCTALNNIEYSGSRSQ-W--NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp GGTTCTTCCEEEESSCHHH-H--HTCBCCCCC----------
T ss_pred HhhCCCCCCEEEECCceee-h--hhhhccCCCCEEEeCCCCE
Confidence 7777777777777766543 1 3555666777777666554
No 391
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.64 E-value=1.6e-16 Score=168.16 Aligned_cols=152 Identities=11% Similarity=0.107 Sum_probs=105.4
Q ss_pred HHHHHhccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCC-----Cc-----hhhHHH--------HHHHHHHHh
Q 047901 500 EIIRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPN-----DQ-----MSDQKE--------FLNEIKALT 561 (786)
Q Consensus 500 ~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----~~-----~~~~~~--------~~~e~~~l~ 561 (786)
.+.....-|.+.++||+|++|.||+|...+|+.||||+++..... .. ...... ..+|...+.
T Consensus 89 ~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~ 168 (397)
T 4gyi_A 89 THAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMK 168 (397)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHH
Confidence 344444459999999999999999999889999999987642110 00 000111 234556666
Q ss_pred hcCCCcccceeeEEecCCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCC
Q 047901 562 KIRHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSN 641 (786)
Q Consensus 562 ~l~hpniv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~ 641 (786)
++.++++....-+.. ...++||||++|++|.+.... .....++.|++.++.|||+. |||||||||.
T Consensus 169 rL~~~gv~vp~p~~~--~~~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~ 234 (397)
T 4gyi_A 169 ALYEEGFPVPEPIAQ--SRHTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILRLAKH---GLIHGDFNEF 234 (397)
T ss_dssp HHHHTTCSCCCEEEE--ETTEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTT
T ss_pred HHHhcCCCCCeeeec--cCceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHH
Confidence 664443322111111 123799999999888665321 12356889999999999998 9999999999
Q ss_pred ceeeCCCC----------cEEEeccccceecCCC
Q 047901 642 NVLLDLEY----------EARVSDFGTAKLLKPN 665 (786)
Q Consensus 642 Nill~~~~----------~~kl~Dfg~a~~~~~~ 665 (786)
|||+++++ .+.|+||+-+....++
T Consensus 235 NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~hp 268 (397)
T 4gyi_A 235 NILIREEKDAEDPSSITLTPIIIXFPQMVSMDHP 268 (397)
T ss_dssp SEEEEEEECSSCTTSEEEEEEECCCTTCEETTST
T ss_pred HEEEeCCCCcccccccccceEEEEeCCcccCCCC
Confidence 99998776 3899999988766543
No 392
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.64 E-value=1.2e-15 Score=146.37 Aligned_cols=111 Identities=23% Similarity=0.209 Sum_probs=60.6
Q ss_pred CCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCCCCcccccccccccc
Q 047901 192 PNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLIL 271 (786)
Q Consensus 192 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L 271 (786)
++|++|++++|+++++.+..|..+++|++|+|++|+|+++.+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 107 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELAL 107 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEEC
Confidence 34555555555555544444555555555555555555444444555555555555555555444445555555555555
Q ss_pred cccccCCCCccccccCCcCceeccccccccc
Q 047901 272 RGNQLSGHLPRALGLLTELEYFDLSSNRLNN 302 (786)
Q Consensus 272 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 302 (786)
++|+++++++..|..+++|+.|++++|++..
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 108 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 5555555555555555666666666665554
No 393
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.62 E-value=8.8e-16 Score=147.12 Aligned_cols=133 Identities=20% Similarity=0.191 Sum_probs=98.0
Q ss_pred ccCCCCCCcEEECCCCCccccCchhccCC-CCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCCCC-CCCCC
Q 047901 21 SFSSFPHLAYLDLSINGFFGTLPPQVRNL-SKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFPPI-CNLSN 98 (786)
Q Consensus 21 ~f~~l~~L~~L~L~~n~i~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~-~~l~~ 98 (786)
.|...++|++|+|++|+++.+ +. +..+ ++|++|+|++|+|+++ ..|..+++|++|+|++|+|+++++.+ ..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 467778888888888888754 44 4444 4888888888888865 57788888888888888888776653 67888
Q ss_pred CcEEEccCCcCcccCc-hhhcccCCcceeccccccccccCCh----hhhccCccceeeccccccc
Q 047901 99 LKYISLHNNKLSGSIP-EEIGNLMKLSYLMLDTNQFTGQLPR----NICRSGLLEILTVNDNHFL 158 (786)
Q Consensus 99 L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~----~~~~~~~L~~L~l~~N~l~ 158 (786)
|++|+|++|+|+.+++ ..|.++++|++|++++|+++. .|. .+..+++|+.|++++|.+.
T Consensus 90 L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 90 LTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHH
Confidence 8888888888875443 367788888888888888873 444 3677777777777776653
No 394
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.60 E-value=3.7e-14 Score=154.52 Aligned_cols=322 Identities=12% Similarity=0.086 Sum_probs=193.0
Q ss_pred ccccCchhccCCC-CCCEEeCcCCcccccCCccccCCCCCCEEeCCCcc---CcccCC-CCCCCCCCcEEEccCCcCccc
Q 047901 38 FFGTLPPQVRNLS-KLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQ---FSGTFP-PICNLSNLKYISLHNNKLSGS 112 (786)
Q Consensus 38 i~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~---l~~~~~-~~~~l~~L~~L~L~~N~l~~~ 112 (786)
++.+...+|.+.. .|+.+.+..+ ++.+...+|.++++|+.+.++.|. ++.+.. +|..+.+|+.+.+..+ ++.+
T Consensus 51 Vt~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I 128 (394)
T 4gt6_A 51 VSKIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEI 128 (394)
T ss_dssp EEEECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEE
T ss_pred eeEcCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-ccee
Confidence 4455556666653 4666666544 555666666666666666666553 333322 2455555555554433 3335
Q ss_pred CchhhcccCCcceeccccccccccCChhhhccCccceeecccccccCCCCCcCCCCCCcEEEccCcccccccCcccCCCC
Q 047901 113 IPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNISEDFGIYP 192 (786)
Q Consensus 113 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~ 192 (786)
...+|.++.+|+.+.+..+ ++...... +.++.+|+.+.+..+ ++.+...+|.. .
T Consensus 129 ~~~aF~~c~~L~~i~lp~~-~~~I~~~~-----------------------F~~c~~L~~i~~~~~-~~~I~~~aF~~-~ 182 (394)
T 4gt6_A 129 DSEAFHHCEELDTVTIPEG-VTSVADGM-----------------------FSYCYSLHTVTLPDS-VTAIEERAFTG-T 182 (394)
T ss_dssp CTTTTTTCTTCCEEECCTT-CCEECTTT-----------------------TTTCTTCCEEECCTT-CCEECTTTTTT-C
T ss_pred hhhhhhhhcccccccccce-eeeecccc-----------------------eecccccccccccce-eeEeccccccc-c
Confidence 5555555555555555432 22222333 445555655555443 44455566654 4
Q ss_pred CCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCcc-------------ccCCccccEEEeecccccccCCCC
Q 047901 193 NLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPE-------------IGNSSQLHVLDLSSNHIAGEIPME 259 (786)
Q Consensus 193 ~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-------------~~~l~~L~~L~Ls~N~i~~~~~~~ 259 (786)
+|+.+.+..+- ..+...+|..+.+++......+......... +.....+..+.+. +.++.+...+
T Consensus 183 ~l~~i~ip~~~-~~i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~a 260 (394)
T 4gt6_A 183 ALTQIHIPAKV-TRIGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIP-NGVARIETHA 260 (394)
T ss_dssp CCSEEEECTTC-CEECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECC-TTEEEECTTT
T ss_pred ceeEEEECCcc-cccccchhhhccccceecccccccccccceeecccccccccccccccccccceEEcC-CcceEcccce
Confidence 56666665443 3355666666666666666555443211111 1122334444443 3344466678
Q ss_pred cccccccccccccccccCCCCccccccCCcCceeccccccccccchhhhhcccCCcEEEecccccCCCcchHHhhhcCcC
Q 047901 260 LGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQEIPEDLALLAHLS 339 (786)
Q Consensus 260 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 339 (786)
|.+...|+.+.+.++... +...+|.++++|+.+.+. +.++.+...+|.++.+|+.++|..+ ++.+...+|.++.+|+
T Consensus 261 F~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~ 337 (394)
T 4gt6_A 261 FDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLE 337 (394)
T ss_dssp TTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCC
T ss_pred eeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCC
Confidence 888888888888766554 777788888889988885 5677888888988889999888765 6656677888888899
Q ss_pred eeeccCCccCCCCCcccccccccceeccccccccccCCcccccCCCceEEeccCCcc
Q 047901 340 ELDLSHNLFKGSIPSRICNLESLEKLNLSHNNISGQIPACFIGMSGLLSIDISYNEL 396 (786)
Q Consensus 340 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 396 (786)
.+.+..+ ++.+....|.++.+|+.+++.+|.... ..|....+|+.+.+..|.+
T Consensus 338 ~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 338 RIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp EEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC----------
T ss_pred EEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 8888654 665667788888889988888876542 4566777888877766654
No 395
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.59 E-value=1.1e-15 Score=146.29 Aligned_cols=137 Identities=20% Similarity=0.169 Sum_probs=101.0
Q ss_pred hhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCCCCCCCCCCcEEEccCCcCcccCchhhcccCCc
Q 047901 44 PQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFPPICNLSNLKYISLHNNKLSGSIPEEIGNLMKL 123 (786)
Q Consensus 44 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 123 (786)
..|.++.+|++|+|++|+|+.+ |......++|++|+|++|+|+++ +.+..+++|++|+|++|+|+++++..|.++++|
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~~i-~~~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp CEEECTTSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred HhcCCcCCceEEEeeCCCCchh-HHhhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 4577888899999999999854 54333344899999999999876 678888899999999999988877777888888
Q ss_pred ceeccccccccccCCh--hhhccCccceeecccccccCCCCCcCCCCCCcEEEccCcccccccCc---ccCCCCCCCEEe
Q 047901 124 SYLMLDTNQFTGQLPR--NICRSGLLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNISE---DFGIYPNLKFLD 198 (786)
Q Consensus 124 ~~L~L~~N~l~~~~~~--~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~---~f~~l~~L~~L~ 198 (786)
++|+|++|+|+. +|. .+. ++++|+.|++++|.++.++.. .+..+++|++||
T Consensus 91 ~~L~L~~N~i~~-~~~~~~l~-----------------------~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld 146 (176)
T 1a9n_A 91 TELILTNNSLVE-LGDLDPLA-----------------------SLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLD 146 (176)
T ss_dssp CEEECCSCCCCC-GGGGGGGG-----------------------GCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEET
T ss_pred CEEECCCCcCCc-chhhHhhh-----------------------cCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeC
Confidence 888888888863 333 343 445555566666666544332 467788888888
Q ss_pred ccCCcccc
Q 047901 199 LSHNNFYG 206 (786)
Q Consensus 199 L~~N~i~~ 206 (786)
+++|.+..
T Consensus 147 ~~~n~~~~ 154 (176)
T 1a9n_A 147 FQKVKLKE 154 (176)
T ss_dssp TEECCHHH
T ss_pred CCcCCHHH
Confidence 88887653
No 396
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.56 E-value=7.5e-17 Score=157.83 Aligned_cols=130 Identities=22% Similarity=0.208 Sum_probs=61.5
Q ss_pred CCCCCEEeccCCccccccCc------CccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCCCCccccc
Q 047901 191 YPNLKFLDLSHNNFYGEISS------NWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLI 264 (786)
Q Consensus 191 l~~L~~L~L~~N~i~~~~~~------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~ 264 (786)
.+.++.++++.|.+.+..|. .|..+++|++|+|++|++++ +| .+..+++|+.|+|++|.++ .+|..+..++
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~ 93 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVAD 93 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCC
Confidence 44555555555555544333 44445555555555555553 23 4455555555555555554 3334444444
Q ss_pred ccccccccccccCCCCccccccCCcCceeccccccccccch-hhhhcccCCcEEEecccccC
Q 047901 265 SLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSIL-EALGFMFKLFYLNFSHNQFS 325 (786)
Q Consensus 265 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~ 325 (786)
+|+.|+|++|+++++ | .+..+++|+.|++++|+++.+.. ..+..+++|++|++++|.++
T Consensus 94 ~L~~L~L~~N~l~~l-~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~ 153 (198)
T 1ds9_A 94 TLEELWISYNQIASL-S-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp HCSEEEEEEEECCCH-H-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHH
T ss_pred cCCEEECcCCcCCcC-C-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccc
Confidence 555555555555432 2 34444444444444444444332 33444444444444444443
No 397
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.56 E-value=7e-17 Score=158.05 Aligned_cols=153 Identities=22% Similarity=0.221 Sum_probs=82.0
Q ss_pred CCCCccEEEccCcccCCCCCc------cccCCccccEEEeecccccccCCCCcccccccccccccccccCCCCccccccC
Q 047901 214 KCHRLGTLIVSGNNITGRIPP------EIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLL 287 (786)
Q Consensus 214 ~l~~L~~L~L~~N~l~~~~~~------~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 287 (786)
....++.++++.+.+.+..|. .|..+++|+.|+|++|.+++ +| .+.++++|+.|++++|+++
T Consensus 16 ~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~---------- 83 (198)
T 1ds9_A 16 ERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK---------- 83 (198)
T ss_dssp HTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC----------
T ss_pred hcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc----------
Confidence 344555555555555544443 45555555555555555543 23 4444555555555555544
Q ss_pred CcCceeccccccccccchhhhhcccCCcEEEecccccCCCcchHHhhhcCcCeeeccCCccCCCCC-cccccccccceec
Q 047901 288 TELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQEIPEDLALLAHLSELDLSHNLFKGSIP-SRICNLESLEKLN 366 (786)
Q Consensus 288 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~ 366 (786)
.++ ..+..+++|++|+|++|++++ +| .+..+++|+.|+|++|++++..+ ..+..+++|+.|+
T Consensus 84 --------------~l~-~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~ 146 (198)
T 1ds9_A 84 --------------KIE-NLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLL 146 (198)
T ss_dssp --------------SCS-SHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEE
T ss_pred --------------ccc-chhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEE
Confidence 322 233444555555555555553 22 45556666666666666653222 3555666666666
Q ss_pred cccccccccCCc----------ccccCCCceEEeccCCccc
Q 047901 367 LSHNNISGQIPA----------CFIGMSGLLSIDISYNELR 397 (786)
Q Consensus 367 L~~N~l~~~~p~----------~~~~l~~L~~L~l~~N~l~ 397 (786)
+++|++++..|. .+..+++|+.|| +|+++
T Consensus 147 l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 147 LAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp ECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred ecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 666666655443 266677777765 56554
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.52 E-value=3.5e-14 Score=134.85 Aligned_cols=106 Identities=25% Similarity=0.255 Sum_probs=79.0
Q ss_pred CCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCCC-CCCCCCCcEEEcc
Q 047901 27 HLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFPP-ICNLSNLKYISLH 105 (786)
Q Consensus 27 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~L~ 105 (786)
..+.|++++|+++.+ |..+ .++|++|+|++|+|+++.|..|..+++|++|+|++|+|+++++. |..+++|++|+|+
T Consensus 10 ~~~~l~~s~n~l~~i-p~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLASV-PTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCSSC-CSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcCcc-CccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 356778888877654 3333 26778888888888777777788888888888888888777665 5677888888888
Q ss_pred CCcCcccCchhhcccCCcceeccccccccc
Q 047901 106 NNKLSGSIPEEIGNLMKLSYLMLDTNQFTG 135 (786)
Q Consensus 106 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 135 (786)
+|+|+++++..|.++++|++|+|++|+++.
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 888887777778888888888888887763
No 399
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.51 E-value=1.1e-12 Score=142.29 Aligned_cols=302 Identities=10% Similarity=0.031 Sum_probs=194.2
Q ss_pred cCCCCCCcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCCCCCCCCCCcE
Q 047901 22 FSSFPHLAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFPPICNLSNLKY 101 (786)
Q Consensus 22 f~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~ 101 (786)
|....+|+.+.+. ..++.+...+|.++.+|+.+.|..+ ++.+...+|.+. +|+.+.+..+ ++.+........+|+.
T Consensus 42 ~~~~~~i~~v~ip-~~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~~L~~ 117 (379)
T 4h09_A 42 YKDRDRISEVRVN-SGITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGTDLDD 117 (379)
T ss_dssp GGGGGGCSEEEEC-TTEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTCCCSE
T ss_pred cccccCCEEEEeC-CCccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceeccCCccc
Confidence 4444566777665 3466666667777777777777544 555666667665 5666666543 4434333222236777
Q ss_pred EEccCCcCcccCchhhcccCCcceeccccccccccCChhhhccCccceeecccccccC-------------CCCCcCCCC
Q 047901 102 ISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLG-------------SIPNLRNCR 168 (786)
Q Consensus 102 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~-------------~~~~l~~l~ 168 (786)
+.+..+ +..+...+|.+. +|+.+.+-.+ ++......|.....++...+..+.... ....+..+.
T Consensus 118 i~lp~~-~~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (379)
T 4h09_A 118 FEFPGA-TTEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAK 194 (379)
T ss_dssp EECCTT-CCEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTC
T ss_pred ccCCCc-cccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccc
Confidence 776654 333555555553 4555544432 333445556666666665554432211 111233445
Q ss_pred CCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEee
Q 047901 169 SLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLS 248 (786)
Q Consensus 169 ~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 248 (786)
.+..+.+..+ ...+....|....+|+.+.+..+ +..+...+|.++..|+.+.+..+ ++.+...+|.+..+|+.+.+.
T Consensus 195 ~~~~~~~~~~-~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~ 271 (379)
T 4h09_A 195 TGTEFTIPST-VKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFY 271 (379)
T ss_dssp CCSEEECCTT-CCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEEC
T ss_pred cccccccccc-eeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccc
Confidence 5555555443 33355667777888888888654 55577778888888888888766 565667788888888888886
Q ss_pred cccccccCCCCcccccccccccccccccCCCCccccccCCcCceeccccccccccchhhhhcccCCcEEEecccccCCCc
Q 047901 249 SNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQEI 328 (786)
Q Consensus 249 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 328 (786)
.+ +..+...+|.++.+|+.+.+.++.++.+...+|.++.+|+.+.|..+ ++.+...+|.++.+|+.+.+..+ ++.+.
T Consensus 272 ~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~ 348 (379)
T 4h09_A 272 AK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIE 348 (379)
T ss_dssp CC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEEC
T ss_pred cc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEc
Confidence 54 55566778888888888888888887777888888888888888654 77788888888888888888655 65555
Q ss_pred chHHhhhc
Q 047901 329 PEDLALLA 336 (786)
Q Consensus 329 ~~~~~~l~ 336 (786)
..+|.+..
T Consensus 349 ~~aF~~c~ 356 (379)
T 4h09_A 349 SGAFEGSS 356 (379)
T ss_dssp TTTTTTSS
T ss_pred hhHhhCCC
Confidence 66776653
No 400
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.50 E-value=7.8e-14 Score=132.92 Aligned_cols=104 Identities=18% Similarity=0.229 Sum_probs=80.6
Q ss_pred CcEEECCCCCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCCC-CCCCCCCcEEEccC
Q 047901 28 LAYLDLSINGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFPP-ICNLSNLKYISLHN 106 (786)
Q Consensus 28 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~L~~ 106 (786)
-+.+++++|+++.+ |..+. ++|++|+|++|+|+++.|..|..+++|++|+|++|+|+++++. |..+++|++|+|++
T Consensus 14 ~~~l~~~~n~l~~i-P~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLASV-PAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCSSC-CSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCCcc-CCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 36788888888543 44443 6788888888888877778888888888888888888877765 56788888888888
Q ss_pred CcCcccCchhhcccCCcceecccccccc
Q 047901 107 NKLSGSIPEEIGNLMKLSYLMLDTNQFT 134 (786)
Q Consensus 107 N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 134 (786)
|+|+++++..|.++++|++|+|++|++.
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcc
Confidence 8888777777888888888888888876
No 401
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.48 E-value=1.5e-13 Score=130.57 Aligned_cols=104 Identities=16% Similarity=0.104 Sum_probs=52.0
Q ss_pred ceeecccccccCCCCCcCCCCCCcEEEccCcccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcc
Q 047901 148 EILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNN 227 (786)
Q Consensus 148 ~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~ 227 (786)
+.+++++|.++.++..+. ++|+.|+|++|+|+++.+..|..+++|++|+|++|+|+++.+..|..+++|+.|+|++|+
T Consensus 12 ~~l~~s~n~l~~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 12 TTVDCSGKSLASVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEeCCCCcCccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 344444444444333332 445555555555555555555555555555555555555555555555555555555555
Q ss_pred cCCCCCccccCCccccEEEeeccccc
Q 047901 228 ITGRIPPEIGNSSQLHVLDLSSNHIA 253 (786)
Q Consensus 228 l~~~~~~~~~~l~~L~~L~Ls~N~i~ 253 (786)
|+++.+..|..+++|+.|+|++|.+.
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred cCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 55444444555555555555555444
No 402
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.45 E-value=2.9e-13 Score=128.96 Aligned_cols=86 Identities=22% Similarity=0.206 Sum_probs=40.7
Q ss_pred CCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCCCCcccccccccccc
Q 047901 192 PNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLIL 271 (786)
Q Consensus 192 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L 271 (786)
++|++|+|++|+|+++.|..|.++++|+.|+|++|+|+++.+..|.++++|+.|+|++|+|+++.+..|..+++|+.|+|
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L 112 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYL 112 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEe
Confidence 34444444444444444444444444444444444444433334444444555555555444443334444555555555
Q ss_pred cccccC
Q 047901 272 RGNQLS 277 (786)
Q Consensus 272 ~~N~l~ 277 (786)
++|.+.
T Consensus 113 ~~N~~~ 118 (174)
T 2r9u_A 113 YNNPWD 118 (174)
T ss_dssp CSSCBC
T ss_pred CCCCcc
Confidence 555544
No 403
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.44 E-value=2.9e-12 Score=138.80 Aligned_cols=303 Identities=7% Similarity=-0.036 Sum_probs=175.5
Q ss_pred hccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCCccCcccCCC-CCCCCCCcEEEccCCcCcccCchhhcccCCc
Q 047901 45 QVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSLNQFSGTFPP-ICNLSNLKYISLHNNKLSGSIPEEIGNLMKL 123 (786)
Q Consensus 45 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 123 (786)
.|....+|+.+.+..+ ++.+...+|.++.+|+.++|..+ ++.+... |.++ +|+.+.+..+ ++.+...+|.+. +|
T Consensus 41 ~~~~~~~i~~v~ip~~-vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~-~L 115 (379)
T 4h09_A 41 WYKDRDRISEVRVNSG-ITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGT-DL 115 (379)
T ss_dssp TGGGGGGCSEEEECTT-EEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTC-CC
T ss_pred ccccccCCEEEEeCCC-ccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceeccC-Cc
Confidence 4555566777777543 55566667777777777777544 5544443 5554 5666666533 555666666653 67
Q ss_pred ceeccccccccccCChhhhccCccceeecccccccCCCCCcCCCCCCcEEEccCcccccc------------cCcccCCC
Q 047901 124 SYLMLDTNQFTGQLPRNICRSGLLEILTVNDNHFLGSIPNLRNCRSLVRAHLGRNNLTGN------------ISEDFGIY 191 (786)
Q Consensus 124 ~~L~L~~N~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~l~~l~~L~~L~L~~N~l~~~------------~~~~f~~l 191 (786)
+.+.+..+ ++.....+|.+. .|+.+.+..+--.-....+.++..++.+.+..+..... ....|...
T Consensus 116 ~~i~lp~~-~~~i~~~~F~~~-~l~~~~~~~~v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (379)
T 4h09_A 116 DDFEFPGA-TTEIGNYIFYNS-SVKRIVIPKSVTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAA 193 (379)
T ss_dssp SEEECCTT-CCEECTTTTTTC-CCCEEEECTTCCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTT
T ss_pred ccccCCCc-cccccccccccc-eeeeeeccceeeccccchhcccccccccccccccceeecccceecccccceecccccc
Confidence 77777654 332333344333 44444444332111122355566666665554432211 11234444
Q ss_pred CCCCEEeccCCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecccccccCCCCcccccccccccc
Q 047901 192 PNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLIL 271 (786)
Q Consensus 192 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L 271 (786)
..+..+.+..+. ..+...+|....+|+.+.+..+ +..+...+|.+...|+.+.+..+ ++.+...+|.+..+|+.+.+
T Consensus 194 ~~~~~~~~~~~~-~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l 270 (379)
T 4h09_A 194 KTGTEFTIPSTV-KTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNF 270 (379)
T ss_dssp CCCSEEECCTTC-CEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEE
T ss_pred ccccccccccce-eEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhccccc
Confidence 555555554432 2355566666677777776544 33355566677777777777655 55455666777777777776
Q ss_pred cccccCCCCccccccCCcCceeccccccccccchhhhhcccCCcEEEecccccCCCcchHHhhhcCcCeeeccCCccCCC
Q 047901 272 RGNQLSGHLPRALGLLTELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQFSQEIPEDLALLAHLSELDLSHNLFKGS 351 (786)
Q Consensus 272 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 351 (786)
..+ +..+...+|.++.+|+.+.+.++.++.+...+|.++.+|+.+.|..+ ++.+...+|.++.+|+.+.+..+ ++.+
T Consensus 271 ~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I 347 (379)
T 4h09_A 271 YAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLI 347 (379)
T ss_dssp CCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEE
T ss_pred ccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEE
Confidence 543 44455666777777777777777777777777777777777777544 55455566777777777777554 5544
Q ss_pred CCccccccc
Q 047901 352 IPSRICNLE 360 (786)
Q Consensus 352 ~~~~~~~l~ 360 (786)
...+|.++.
T Consensus 348 ~~~aF~~c~ 356 (379)
T 4h09_A 348 ESGAFEGSS 356 (379)
T ss_dssp CTTTTTTSS
T ss_pred chhHhhCCC
Confidence 456666654
No 404
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.33 E-value=3.6e-12 Score=136.34 Aligned_cols=102 Identities=20% Similarity=0.206 Sum_probs=51.3
Q ss_pred EEcCCC-CCcccCCcCccCCCCCCcEEECCC-CCccccCchhccCCCCCCEEeCcCCcccccCCccccCCCCCCEEeCCC
Q 047901 6 INLTST-GLKGTLQEFSFSSFPHLAYLDLSI-NGFFGTLPPQVRNLSKLKYLDLSENELSGKIPPEIGLLTHLFSLDLSL 83 (786)
Q Consensus 6 l~l~~~-~l~~~l~~~~f~~l~~L~~L~L~~-n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 83 (786)
++++++ ++. .+|. |..+++|++|+|++ |+|+++.+..|.+|++|++|+|++|+|+++.|..|..|++|++|+|++
T Consensus 13 v~~~~~n~l~-~ip~--l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH--LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp EECCSSCCCT-TTTT--SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEcCCCCCCC-ccCC--CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 344444 443 3444 55555555555553 555555555555555555555555555555555555555555555555
Q ss_pred ccCcccCCCCCCCCCCcEEEccCCcCc
Q 047901 84 NQFSGTFPPICNLSNLKYISLHNNKLS 110 (786)
Q Consensus 84 N~l~~~~~~~~~l~~L~~L~L~~N~l~ 110 (786)
|+|+++++.+.....|++|+|++|.+.
T Consensus 90 N~l~~~~~~~~~~~~L~~l~l~~N~~~ 116 (347)
T 2ifg_A 90 NALESLSWKTVQGLSLQELVLSGNPLH 116 (347)
T ss_dssp SCCSCCCSTTTCSCCCCEEECCSSCCC
T ss_pred CccceeCHHHcccCCceEEEeeCCCcc
Confidence 555554443222222555555555554
No 405
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.33 E-value=2e-14 Score=154.46 Aligned_cols=165 Identities=19% Similarity=0.146 Sum_probs=80.1
Q ss_pred CCCCCEEeccCCccccccCcCccCC-----CCccEEEccCcccCCCCCccc-cCCccccEEEeecccccccCCCCccccc
Q 047901 191 YPNLKFLDLSHNNFYGEISSNWGKC-----HRLGTLIVSGNNITGRIPPEI-GNSSQLHVLDLSSNHIAGEIPMELGRLI 264 (786)
Q Consensus 191 l~~L~~L~L~~N~i~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~Ls~N~i~~~~~~~~~~l~ 264 (786)
+++|++|+|++|.|+......+... ++|++|+|++|.|++.....+ ..+++|+.|+|++|.|+......++.
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~-- 148 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRD-- 148 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHH--
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHH--
Confidence 4567778888877765433333222 456666666666543211111 22344555555555544222121110
Q ss_pred ccccccccccccCCCCcccc-ccCCcCceeccccccccccchh----hhhcccCCcEEEecccccCCCc----chHHhhh
Q 047901 265 SLNKLILRGNQLSGHLPRAL-GLLTELEYFDLSSNRLNNSILE----ALGFMFKLFYLNFSHNQFSQEI----PEDLALL 335 (786)
Q Consensus 265 ~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~----~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l 335 (786)
.+ ...++|+.|+|++|.|+..... .+...++|++|+|++|.|+... +..+...
T Consensus 149 ------------------~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~ 210 (372)
T 3un9_A 149 ------------------LLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRN 210 (372)
T ss_dssp ------------------HHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGC
T ss_pred ------------------HHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcC
Confidence 01 1234555555555555443222 2244555666666666554321 2334445
Q ss_pred cCcCeeeccCCccCCC----CCcccccccccceecccccccccc
Q 047901 336 AHLSELDLSHNLFKGS----IPSRICNLESLEKLNLSHNNISGQ 375 (786)
Q Consensus 336 ~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~ 375 (786)
++|+.|+|++|.|+.. ++..+...++|+.|+|++|.|+..
T Consensus 211 ~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 211 RQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp SCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred CCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 5666666666666532 122233345666666666666543
No 406
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.33 E-value=2.1e-14 Score=154.38 Aligned_cols=165 Identities=17% Similarity=0.066 Sum_probs=104.7
Q ss_pred CCCCcEEEccCcccccccCcccCC-----CCCCCEEeccCCccccccCcCc-cCCCCccEEEccCcccCCCCCccc----
Q 047901 167 CRSLVRAHLGRNNLTGNISEDFGI-----YPNLKFLDLSHNNFYGEISSNW-GKCHRLGTLIVSGNNITGRIPPEI---- 236 (786)
Q Consensus 167 l~~L~~L~L~~N~l~~~~~~~f~~-----l~~L~~L~L~~N~i~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~---- 236 (786)
++.|+.|+|++|.|+......+.. .++|++|+|++|.|+......+ ..+++|++|+|++|+|++.....+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 367999999999998755444433 3799999999999975443333 356789999999999985433333
Q ss_pred -cCCccccEEEeecccccccCCCCcccccccccccccccccCCCCccccccCCcCceeccccccccccc----hhhhhcc
Q 047901 237 -GNSSQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGNQLSGHLPRALGLLTELEYFDLSSNRLNNSI----LEALGFM 311 (786)
Q Consensus 237 -~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l 311 (786)
...++|+.|+|++|.|+......+ +..+...++|+.|+|++|.|.... ...+...
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l--------------------~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~ 210 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVL--------------------MEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRN 210 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHH--------------------HHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGC
T ss_pred HhcCCccceeeCCCCCCChHHHHHH--------------------HHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcC
Confidence 235678888888887763211111 122334445555555555554432 2334455
Q ss_pred cCCcEEEecccccCCC----cchHHhhhcCcCeeeccCCccCCC
Q 047901 312 FKLFYLNFSHNQFSQE----IPEDLALLAHLSELDLSHNLFKGS 351 (786)
Q Consensus 312 ~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~ 351 (786)
++|+.|+|++|.|+.. +...+...++|++|+|++|.|+..
T Consensus 211 ~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 211 RQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp SCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred CCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 5666666666666542 223344557788888888877643
No 407
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.29 E-value=6.1e-12 Score=134.49 Aligned_cols=103 Identities=17% Similarity=0.085 Sum_probs=82.2
Q ss_pred eeecccc-cccCCCCCcCCCCCCcEEEccC-cccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCc
Q 047901 149 ILTVNDN-HFLGSIPNLRNCRSLVRAHLGR-NNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGN 226 (786)
Q Consensus 149 ~L~l~~N-~l~~~~~~l~~l~~L~~L~L~~-N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N 226 (786)
.++++++ .++.++. +..+++|+.|+|++ |+|+++.+..|..+++|++|+|++|+|+++.|..|.++++|+.|+|++|
T Consensus 12 ~v~~~~~n~l~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 12 GLRCTRDGALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp CEECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEEcCCCCCCCccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 3466666 6766666 77778888888885 8888888888888888888888888888888888888888888888888
Q ss_pred ccCCCCCccccCCccccEEEeeccccc
Q 047901 227 NITGRIPPEIGNSSQLHVLDLSSNHIA 253 (786)
Q Consensus 227 ~l~~~~~~~~~~l~~L~~L~Ls~N~i~ 253 (786)
+|+++.+..|..++ |+.|+|++|.+.
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 88876666666665 888888888876
No 408
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.24 E-value=2.6e-11 Score=124.02 Aligned_cols=147 Identities=12% Similarity=0.094 Sum_probs=113.9
Q ss_pred HHHHhccCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcC-CCcccceeeEEecCC
Q 047901 501 IIRRTKDFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIR-HRNIVKFYGFCSHVR 579 (786)
Q Consensus 501 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-hpniv~l~~~~~~~~ 579 (786)
+......|+.....+.|+.+.||++... ++.+++|+...... .....+.+|+++++.+. +..+.++++++...+
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~----~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~ 83 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYK----GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDG 83 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGT----TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETT
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccC----CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCC
Confidence 3344567888888999999999999864 68999999864211 11235778999999884 677889999999888
Q ss_pred eeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC------------------------------
Q 047901 580 HSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDC------------------------------ 629 (786)
Q Consensus 580 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~------------------------------ 629 (786)
..|+||||++|.++.+.... ......++.++++++..||+..
T Consensus 84 ~~~lv~e~i~G~~l~~~~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (263)
T 3tm0_A 84 WSNLLMSEADGVLCSEEYED--------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDC 155 (263)
T ss_dssp EEEEEEECCSSEEHHHHCCT--------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSG
T ss_pred ceEEEEEecCCeehhhccCC--------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccc
Confidence 99999999999999876321 1123467889999999999821
Q ss_pred --------------------------CCCeEEcCCCCCceeeCCCCcEEEeccccce
Q 047901 630 --------------------------FPPIVHRDISSNNVLLDLEYEARVSDFGTAK 660 (786)
Q Consensus 630 --------------------------~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~ 660 (786)
.+.++|+|++|.||+++.+..+.|+||+.+.
T Consensus 156 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 156 ENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp GGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1358999999999999876667899998775
No 409
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.12 E-value=1.2e-10 Score=118.92 Aligned_cols=137 Identities=15% Similarity=0.122 Sum_probs=100.4
Q ss_pred cCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCc--ccceeeEEecCCeeeEE
Q 047901 507 DFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRN--IVKFYGFCSHVRHSFVV 584 (786)
Q Consensus 507 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpn--iv~l~~~~~~~~~~~lv 584 (786)
.+......+.|..+.||++...+|+.+++|..... ....+.+|+++++.+.+.+ +.+++++....+..++|
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~-------~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v 93 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG-------ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLL 93 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC-------TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEE
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc-------cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEE
Confidence 34443333456669999998877888999997542 1134678999998885444 56688888888889999
Q ss_pred EeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC-----------------------------------
Q 047901 585 YEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDC----------------------------------- 629 (786)
Q Consensus 585 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~----------------------------------- 629 (786)
|||++|.++. ... .+ ...++.++++.+..||+..
T Consensus 94 ~e~i~G~~l~--~~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (264)
T 1nd4_A 94 LGEVPGQDLL--SSH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEH 162 (264)
T ss_dssp EECCSSEETT--TSC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGG
T ss_pred EEecCCcccC--cCc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhc
Confidence 9999998874 211 11 2356778888888888752
Q ss_pred --------------------CCCeEEcCCCCCceeeCCCCcEEEecccccee
Q 047901 630 --------------------FPPIVHRDISSNNVLLDLEYEARVSDFGTAKL 661 (786)
Q Consensus 630 --------------------~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~ 661 (786)
.+.++|+|++|.||+++.++.++|+|||.+..
T Consensus 163 ~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 163 QGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp TTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred cCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11399999999999998777778999998753
No 410
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.99 E-value=1.6e-09 Score=116.10 Aligned_cols=144 Identities=14% Similarity=0.234 Sum_probs=107.8
Q ss_pred cceeeccccCceEEEEEcCCCCEEEEEEcC--CCCCCCchhhHHHHHHHHHHHhhcC--CCcccceeeEEecC---Ceee
Q 047901 510 AKYCIGKGEHRSVYRAKLPSGDKIAVKKFN--SPFPNDQMSDQKEFLNEIKALTKIR--HRNIVKFYGFCSHV---RHSF 582 (786)
Q Consensus 510 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~~~e~~~l~~l~--hpniv~l~~~~~~~---~~~~ 582 (786)
..+.++.|.++.||+....+ ..+++|+.. ... .......+.+|.++++.+. +..+.++++++.+. +..|
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~---~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~ 117 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSK---LLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAF 117 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC-------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCC---CCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeE
Confidence 45678999999999998764 678888875 311 1112346778999999886 45688899988776 4589
Q ss_pred EEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC---------------------------------
Q 047901 583 VVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDC--------------------------------- 629 (786)
Q Consensus 583 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~--------------------------------- 629 (786)
+||||++|..+.+.. ...++...+..++.+++++|..||+..
T Consensus 118 ~vme~v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (359)
T 3dxp_A 118 YIMEFVSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETE 192 (359)
T ss_dssp EEEECCCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCS
T ss_pred EEEEecCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCc
Confidence 999999997774421 234678888889999999999999731
Q ss_pred ----------------------CCCeEEcCCCCCceeeCCCC--cEEEeccccceec
Q 047901 630 ----------------------FPPIVHRDISSNNVLLDLEY--EARVSDFGTAKLL 662 (786)
Q Consensus 630 ----------------------~~~ivHrdlk~~Nill~~~~--~~kl~Dfg~a~~~ 662 (786)
.+.++|||+++.||+++.++ .+.|+||+.+...
T Consensus 193 ~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 193 SIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp CCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred CChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 24799999999999999775 3699999998754
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.89 E-value=3.7e-10 Score=120.07 Aligned_cols=58 Identities=22% Similarity=0.192 Sum_probs=26.8
Q ss_pred ccCCCCCCEEeCCCccCcccCCCCCCCCCCcEEEccCCcCcccCchhhc--ccCCcceeccc
Q 047901 70 IGLLTHLFSLDLSLNQFSGTFPPICNLSNLKYISLHNNKLSGSIPEEIG--NLMKLSYLMLD 129 (786)
Q Consensus 70 ~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L~ 129 (786)
+..+++|+.|+|++|.-..++ .+ .+++|++|+|..|.+.......+. .+++|++|+|+
T Consensus 168 l~~~P~L~~L~L~g~~~l~l~-~~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~ 227 (362)
T 2ra8_A 168 LDAMPLLNNLKIKGTNNLSIG-KK-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLY 227 (362)
T ss_dssp HHTCTTCCEEEEECCBTCBCC-SC-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEE
T ss_pred HhcCCCCcEEEEeCCCCceec-cc-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEe
Confidence 345556666666555211111 12 255566666655555432222232 45555555553
No 412
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.89 E-value=1.7e-09 Score=112.98 Aligned_cols=191 Identities=18% Similarity=0.211 Sum_probs=122.5
Q ss_pred ceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcC-CCc--ccceeeEEecCC---eeeEE
Q 047901 511 KYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIR-HRN--IVKFYGFCSHVR---HSFVV 584 (786)
Q Consensus 511 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-hpn--iv~l~~~~~~~~---~~~lv 584 (786)
.+.++.|....||+.. +.+++|+-.. ......+.+|.++++.+. +.. +.++++.....+ ..|+|
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~------~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~v 94 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKH------SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAG 94 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESS------HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCC------cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEE
Confidence 4568999999999873 5688988643 134567889999998883 332 445555543333 45899
Q ss_pred EeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC-----------------------------------
Q 047901 585 YEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDC----------------------------------- 629 (786)
Q Consensus 585 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~----------------------------------- 629 (786)
||+++|.++.+... ..++..++..++.++++.+..||+..
T Consensus 95 m~~i~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (304)
T 3sg8_A 95 FTKIKGVPLTPLLL-----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQ 169 (304)
T ss_dssp EECCCCEECCHHHH-----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHH
T ss_pred EcccCCeECCcccc-----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCccc
Confidence 99999988865332 23566777788888888888888621
Q ss_pred --------------------CCCeEEcCCCCCceeeCC--CCcEEEeccccceecCCCCCcceeeccCccc---cCCCCC
Q 047901 630 --------------------FPPIVHRDISSNNVLLDL--EYEARVSDFGTAKLLKPNSSNWTELVGTFGY---VAPAHG 684 (786)
Q Consensus 630 --------------------~~~ivHrdlk~~Nill~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y---~aPE~~ 684 (786)
.+.++|+|++|.||+++. +..+.|+||+.+....+. .... ....+ ..|+..
T Consensus 170 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~-~Dl~---~~~~~~~~~~~~~~ 245 (304)
T 3sg8_A 170 MKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPD-NDFI---SLMEDDEEYGMEFV 245 (304)
T ss_dssp HHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTT-HHHH---TTCCTTTSCCHHHH
T ss_pred HHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChH-HHHH---HHHhhccccCHHHH
Confidence 135899999999999998 566899999998765321 1000 00000 111000
Q ss_pred C------CCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCC
Q 047901 685 N------IGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPG 722 (786)
Q Consensus 685 ~------~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf 722 (786)
. .....++.... .....+.|++|.++|.+.+|..+|
T Consensus 246 ~~~l~~Y~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 246 SKILNHYKHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHHHHHHTCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHcCCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 0 00000011111 122368999999999999999884
No 413
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.85 E-value=6.6e-10 Score=118.16 Aligned_cols=83 Identities=17% Similarity=0.304 Sum_probs=40.6
Q ss_pred ccCCcEEEecccccCCCcchHHh---hhcCcCeeeccCCccCCC----CCcccccccccceeccccccccccCCccccc-
Q 047901 311 MFKLFYLNFSHNQFSQEIPEDLA---LLAHLSELDLSHNLFKGS----IPSRICNLESLEKLNLSHNNISGQIPACFIG- 382 (786)
Q Consensus 311 l~~L~~L~L~~N~l~~~~~~~~~---~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~- 382 (786)
+++|++|+|.+|.+....+..+. .+++|+.|+|+.|.|++. ++..+..+++|+.|+|++|.|+...-..+..
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~a 330 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKS 330 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHH
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHH
Confidence 44555555555555432222222 245566666666665532 1222234566666666666665432222322
Q ss_pred CCCceEEeccCCc
Q 047901 383 MSGLLSIDISYNE 395 (786)
Q Consensus 383 l~~L~~L~l~~N~ 395 (786)
+ ...+++++|+
T Consensus 331 l--g~~~~~~~~~ 341 (362)
T 2ra8_A 331 L--PMKIDVSDSQ 341 (362)
T ss_dssp C--CSEEECCSBC
T ss_pred c--CCEEEecCCc
Confidence 1 2346666666
No 414
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.65 E-value=2.2e-07 Score=97.57 Aligned_cols=138 Identities=17% Similarity=0.193 Sum_probs=103.0
Q ss_pred cCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCC----CcccceeeEEecCCeee
Q 047901 507 DFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH----RNIVKFYGFCSHVRHSF 582 (786)
Q Consensus 507 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h----pniv~l~~~~~~~~~~~ 582 (786)
.+...+.++.|..+.||+. ++.+++|+... ......+.+|.++++.+.+ ..+.+++++ +..|
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~------~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~ 103 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKR------DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRF 103 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESS------HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSC
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCc------HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcE
Confidence 5667788999999999998 66788887643 2224568899999888865 234555555 5678
Q ss_pred EEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCC--------------------------------
Q 047901 583 VVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCF-------------------------------- 630 (786)
Q Consensus 583 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~-------------------------------- 630 (786)
+||||++|.++.+... ..++..+...++.++++.+..||+...
T Consensus 104 lvme~i~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (320)
T 3r70_A 104 NIMKYIKGERITYEQY-----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKE 178 (320)
T ss_dssp EEEECCCCBCCCHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHT
T ss_pred EEEeecCCcccccccc-----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhc
Confidence 9999999988864332 235666667778888888888885422
Q ss_pred ----------------------------CCeEEcCCCCCceeeCCCCcEEEeccccceecC
Q 047901 631 ----------------------------PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK 663 (786)
Q Consensus 631 ----------------------------~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 663 (786)
+.++|+|++|.||+++.+..+.|+||+.+....
T Consensus 179 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~ 239 (320)
T 3r70_A 179 QLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGD 239 (320)
T ss_dssp TCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEEC
T ss_pred ccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCC
Confidence 235999999999999987678999999987554
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.60 E-value=3e-09 Score=107.10 Aligned_cols=105 Identities=27% Similarity=0.218 Sum_probs=53.0
Q ss_pred cCCCCCCcE--EECCCCCcc---ccCchhccCCCCCCEEeCcCCcccccC--CccccCCCCCCEEeCCCccCcccCC--C
Q 047901 22 FSSFPHLAY--LDLSINGFF---GTLPPQVRNLSKLKYLDLSENELSGKI--PPEIGLLTHLFSLDLSLNQFSGTFP--P 92 (786)
Q Consensus 22 f~~l~~L~~--L~L~~n~i~---~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~~--~ 92 (786)
|...|.|.. ++++.|+.. ...+....++++|+.|+|++|+|+++. |..+..+++|+.|+|++|+|++... .
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~ 216 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDK 216 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhh
Confidence 444445554 555555332 111222245566666666666666532 3445566666666666666654411 1
Q ss_pred CCCCCCCcEEEccCCcCcccCc-------hhhcccCCcceec
Q 047901 93 ICNLSNLKYISLHNNKLSGSIP-------EEIGNLMKLSYLM 127 (786)
Q Consensus 93 ~~~l~~L~~L~L~~N~l~~~~~-------~~~~~l~~L~~L~ 127 (786)
+..+ +|++|+|++|.+.+..| ..+..+++|+.||
T Consensus 217 l~~l-~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 217 IKGL-KLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GTTS-CCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred cccC-CcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 2222 56666666666654322 2244555555543
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.59 E-value=9.8e-09 Score=98.44 Aligned_cols=113 Identities=12% Similarity=0.113 Sum_probs=61.4
Q ss_pred cCCCCCCcEEECCCC-Ccccc----CchhccCCCCCCEEeCcCCccccc----CCccccCCCCCCEEeCCCccCcc----
Q 047901 22 FSSFPHLAYLDLSIN-GFFGT----LPPQVRNLSKLKYLDLSENELSGK----IPPEIGLLTHLFSLDLSLNQFSG---- 88 (786)
Q Consensus 22 f~~l~~L~~L~L~~n-~i~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~---- 88 (786)
+...+.|++|+|++| .|... +...+...++|++|+|++|+|... +...+...++|++|+|++|+|+.
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~ 111 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 111 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHH
Confidence 445566666666666 66431 234455556666666666666532 12334445566666666666653
Q ss_pred -cCCCCCCCCCCcEEEc--cCCcCcccC----chhhcccCCcceecccccccc
Q 047901 89 -TFPPICNLSNLKYISL--HNNKLSGSI----PEEIGNLMKLSYLMLDTNQFT 134 (786)
Q Consensus 89 -~~~~~~~l~~L~~L~L--~~N~l~~~~----~~~~~~l~~L~~L~L~~N~l~ 134 (786)
+...+...++|++|+| ++|.|.... ...+...++|++|+|++|.+.
T Consensus 112 ~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 112 ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 2233445556666666 556665322 223334455666666666554
No 417
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.50 E-value=3.6e-08 Score=99.26 Aligned_cols=105 Identities=23% Similarity=0.215 Sum_probs=72.9
Q ss_pred cccCCcCce--eccccccccccc---hhhhhcccCCcEEEecccccCCC--cchHHhhhcCcCeeeccCCccCCCCCccc
Q 047901 284 LGLLTELEY--FDLSSNRLNNSI---LEALGFMFKLFYLNFSHNQFSQE--IPEDLALLAHLSELDLSHNLFKGSIPSRI 356 (786)
Q Consensus 284 ~~~l~~L~~--L~L~~N~l~~~~---~~~~~~l~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 356 (786)
|...+.|+. ++++.|+...+. ......+++|+.|+|++|+|+++ +|..+..+++|+.|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 555556665 667777543322 22335678888888888888874 346777888999999999988854 334
Q ss_pred cccc--ccceeccccccccccCCc-------ccccCCCceEEe
Q 047901 357 CNLE--SLEKLNLSHNNISGQIPA-------CFIGMSGLLSID 390 (786)
Q Consensus 357 ~~l~--~L~~L~L~~N~l~~~~p~-------~~~~l~~L~~L~ 390 (786)
..+. +|++|+|++|++++..|. .+..+++|+.||
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 4444 888889999988875552 366788888775
No 418
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.45 E-value=3.2e-08 Score=94.81 Aligned_cols=96 Identities=16% Similarity=0.129 Sum_probs=68.4
Q ss_pred ccCchhccCCCCCCEEeCcCC-ccccc----CCccccCCCCCCEEeCCCccCccc-----CCCCCCCCCCcEEEccCCcC
Q 047901 40 GTLPPQVRNLSKLKYLDLSEN-ELSGK----IPPEIGLLTHLFSLDLSLNQFSGT-----FPPICNLSNLKYISLHNNKL 109 (786)
Q Consensus 40 ~~~~~~~~~l~~L~~L~L~~N-~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~-----~~~~~~l~~L~~L~L~~N~l 109 (786)
..+...+...++|++|+|++| .|... +...+...++|++|+|++|+|+.. ...+...++|++|+|++|.|
T Consensus 26 ~~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i 105 (185)
T 1io0_A 26 ETLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFI 105 (185)
T ss_dssp HHHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCC
T ss_pred HHHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcC
Confidence 345566788889999999999 88642 334556678899999999988641 22344567888888888888
Q ss_pred ccc----CchhhcccCCcceecc--ccccccc
Q 047901 110 SGS----IPEEIGNLMKLSYLML--DTNQFTG 135 (786)
Q Consensus 110 ~~~----~~~~~~~l~~L~~L~L--~~N~l~~ 135 (786)
... ....+...++|++|+| ++|.|+.
T Consensus 106 ~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~ 137 (185)
T 1io0_A 106 SGSGILALVEALQSNTSLIELRIDNQSQPLGN 137 (185)
T ss_dssp CHHHHHHHHHGGGGCSSCCEEECCCCSSCCCH
T ss_pred CHHHHHHHHHHHHhCCCceEEEecCCCCCCCH
Confidence 753 2345566677888888 7787764
No 419
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.43 E-value=1.5e-06 Score=88.86 Aligned_cols=135 Identities=16% Similarity=0.162 Sum_probs=97.9
Q ss_pred eeccccCc-eEEEEEcC-CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcC-CCcccceeeEEecCCeeeEEEeccC
Q 047901 513 CIGKGEHR-SVYRAKLP-SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIR-HRNIVKFYGFCSHVRHSFVVYEYIN 589 (786)
Q Consensus 513 ~ig~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-hpniv~l~~~~~~~~~~~lv~e~~~ 589 (786)
.+..|..| .||+.... ++..+++|+-.. .....+.+|.++++.+. +--|.++++++.+.+..|+|||+++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~-------~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~ 103 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG-------SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIP 103 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET-------HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCC
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC-------CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeC
Confidence 44556555 69998765 567899998643 23456788999998884 3347788999999999999999999
Q ss_pred CCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCC----------------------------------------
Q 047901 590 RGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDC---------------------------------------- 629 (786)
Q Consensus 590 ~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~---------------------------------------- 629 (786)
|.++.+..... ......++.+++..+..||+..
T Consensus 104 G~~~~~~~~~~-------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (272)
T 4gkh_A 104 GKTAFQVLEEY-------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPV 176 (272)
T ss_dssp SEEHHHHHHHC-------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCH
T ss_pred CccccccccCC-------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHH
Confidence 98887755321 1122345666677777777531
Q ss_pred ---------------CCCeEEcCCCCCceeeCCCCcEEEecccccee
Q 047901 630 ---------------FPPIVHRDISSNNVLLDLEYEARVSDFGTAKL 661 (786)
Q Consensus 630 ---------------~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~ 661 (786)
.+.++|+|+.+.||+++.++.+-|+||+.+..
T Consensus 177 ~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 177 EQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 11389999999999999887778999998753
No 420
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.38 E-value=1.3e-06 Score=89.77 Aligned_cols=142 Identities=19% Similarity=0.191 Sum_probs=92.6
Q ss_pred ccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCC---cccceeeEEecCCeeeEEE
Q 047901 509 DAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHR---NIVKFYGFCSHVRHSFVVY 585 (786)
Q Consensus 509 ~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hp---niv~l~~~~~~~~~~~lv~ 585 (786)
...+.++.|.++.||+++..+|+.++||+..... ......|..|++.++.+++. .+.+++++. ..++||
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~----~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvm 89 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDA----PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAM 89 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTC----CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEE
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCCC----cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEE
Confidence 4456799999999999998889999999964321 11234688999999999764 577787763 368999
Q ss_pred eccCCCCHHH-----------HhhcCCCC------------------CCCCHHHHHH--------------------HHH
Q 047901 586 EYINRGSLAT-----------VLSNNFAS------------------EDFDWRKRMN--------------------VIT 616 (786)
Q Consensus 586 e~~~~g~L~~-----------~l~~~~~~------------------~~~~~~~~~~--------------------i~~ 616 (786)
||++++.+.. .++..... ..-+|..... ...
T Consensus 90 e~l~g~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~ 169 (288)
T 3d1u_A 90 EWVDERPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVR 169 (288)
T ss_dssp ECCCCCCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHH
T ss_pred EecccCCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHH
Confidence 9999987521 12221100 0013332210 011
Q ss_pred HHHHHHHHHh----hCCCCCeEEcCCCCCceeeCCCCcEEEeccccce
Q 047901 617 GVADALSYMH----HDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAK 660 (786)
Q Consensus 617 ~ia~~l~~LH----~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~ 660 (786)
.+-+.+..+. ....+.++|+|+.+.||+++. +.+.|+|| .+.
T Consensus 170 ~~~~l~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~-~~~~~iD~-~~~ 215 (288)
T 3d1u_A 170 LVEKVLDALDHLAGDPEPPARIHGDLWNGNVLWQD-DGAVVIDP-AAH 215 (288)
T ss_dssp HHHHHHHTHHHHTCSCCCCEEECSCCSGGGEEEET-TEEEECSC-CCE
T ss_pred HHHHHHHHHHHHhcCCCCCcceECCCCcCcEEEeC-CCeEEEcC-CcC
Confidence 1122233332 223468999999999999987 45889999 654
No 421
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.37 E-value=3.2e-06 Score=87.92 Aligned_cols=138 Identities=17% Similarity=0.194 Sum_probs=95.0
Q ss_pred ceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCC---cccceeeEEe-cCCeeeEEEe
Q 047901 511 KYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHR---NIVKFYGFCS-HVRHSFVVYE 586 (786)
Q Consensus 511 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hp---niv~l~~~~~-~~~~~~lv~e 586 (786)
.+.++.|....||+. ++.+++|+-.. ......+.+|.++++.+.+. .|.+++.++. ..+..++|||
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~------~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e 93 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS------QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYR 93 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS------HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEE
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC------chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEe
Confidence 456888888899988 56788887432 23456788999999999642 3666777764 4566789999
Q ss_pred ccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhC--------------------------------------
Q 047901 587 YINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHD-------------------------------------- 628 (786)
Q Consensus 587 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~-------------------------------------- 628 (786)
|++|..+.+... ..++......++.++++.+..||+.
T Consensus 94 ~i~G~~l~~~~~-----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~ 168 (306)
T 3tdw_A 94 KVQGQILGEDGM-----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESL 168 (306)
T ss_dssp CCCSEECHHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHH
T ss_pred ccCCeECchhhh-----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhh
Confidence 999988765321 1223344444455555555544432
Q ss_pred -------------------CCCCeEEcCCCCCceeeCC---CCc-EEEeccccceecC
Q 047901 629 -------------------CFPPIVHRDISSNNVLLDL---EYE-ARVSDFGTAKLLK 663 (786)
Q Consensus 629 -------------------~~~~ivHrdlk~~Nill~~---~~~-~kl~Dfg~a~~~~ 663 (786)
..+.++|+|++|.||+++. ++. +.|+||+.+....
T Consensus 169 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~gd 226 (306)
T 3tdw_A 169 RDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISD 226 (306)
T ss_dssp HHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEEC
T ss_pred HHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCCC
Confidence 2235799999999999997 344 5899999887543
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.19 E-value=6.7e-06 Score=87.60 Aligned_cols=146 Identities=15% Similarity=0.215 Sum_probs=92.3
Q ss_pred CccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCc--ccceeeEEecC-CeeeEE
Q 047901 508 FDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRN--IVKFYGFCSHV-RHSFVV 584 (786)
Q Consensus 508 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpn--iv~l~~~~~~~-~~~~lv 584 (786)
....+.++.|....+|+.+. +++.+++|..... ..+..|..+++.+.... +.++++++... +..|+|
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~---------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv 112 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA---------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCI 112 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC---------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEE
T ss_pred CceEEECCCCCcceEEEEEE-CCcEEEEEeCCch---------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEE
Confidence 34456789999999999986 4788999987431 24778889988886433 56777777654 678999
Q ss_pred EeccCCCCHHHH------------------hhcCCCCC----------C----CCHHHH---------------------
Q 047901 585 YEYINRGSLATV------------------LSNNFASE----------D----FDWRKR--------------------- 611 (786)
Q Consensus 585 ~e~~~~g~L~~~------------------l~~~~~~~----------~----~~~~~~--------------------- 611 (786)
|||++|.++.+. ++...... . -+|...
T Consensus 113 ~e~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~ 192 (362)
T 3ovc_A 113 SRRAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVS 192 (362)
T ss_dssp EECCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTH
T ss_pred EEecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 999998655321 11110000 0 011111
Q ss_pred HHHHHHHHHHHHHHhhC-CCCCeEEcCCCCCceeeCCCCcEEEeccccceecC
Q 047901 612 MNVITGVADALSYMHHD-CFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK 663 (786)
Q Consensus 612 ~~i~~~ia~~l~~LH~~-~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 663 (786)
......+.....++... ..+.++|+|+++.||+++.++.+.|+||+.+....
T Consensus 193 ~~~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~gd 245 (362)
T 3ovc_A 193 ASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFGD 245 (362)
T ss_dssp HHHHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEEC
T ss_pred ccchHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccCC
Confidence 01111222223333221 11478999999999999877788999999987653
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.04 E-value=8.9e-06 Score=86.71 Aligned_cols=83 Identities=5% Similarity=0.009 Sum_probs=54.5
Q ss_pred ceee-ccccCceEEEEEcC-------CCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcC-C--CcccceeeEEecC-
Q 047901 511 KYCI-GKGEHRSVYRAKLP-------SGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIR-H--RNIVKFYGFCSHV- 578 (786)
Q Consensus 511 ~~~i-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h--pniv~l~~~~~~~- 578 (786)
.+.+ +.|....+|+.... +++.+++|+........ ......+.+|.++++.+. + -.+.++++++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~-~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~ 103 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVP-VFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD 103 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCC-SSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccc-cCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC
Confidence 3567 88888999998754 25678888764321000 000134567888888774 3 3577788887655
Q ss_pred --CeeeEEEeccCCCCHH
Q 047901 579 --RHSFVVYEYINRGSLA 594 (786)
Q Consensus 579 --~~~~lv~e~~~~g~L~ 594 (786)
+..|+||||++|..+.
T Consensus 104 ~~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 104 VLGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TTSSCEEEEECCCCBCCC
T ss_pred ccCCceEEEEecCCCChh
Confidence 4578999999987654
No 424
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.93 E-value=4e-05 Score=82.90 Aligned_cols=79 Identities=13% Similarity=0.043 Sum_probs=49.6
Q ss_pred ceeeccccCceEEEEEcC-CCCEEEEEEcCCCCC---CCchhhHHHHHHHHHHHhhcCC--Cc-ccceeeEEecCCeeeE
Q 047901 511 KYCIGKGEHRSVYRAKLP-SGDKIAVKKFNSPFP---NDQMSDQKEFLNEIKALTKIRH--RN-IVKFYGFCSHVRHSFV 583 (786)
Q Consensus 511 ~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~~~~~e~~~l~~l~h--pn-iv~l~~~~~~~~~~~l 583 (786)
.+.+|.|..+.||++... +++.++||....... ........++..|.++++.+.. |. +.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 457999999999999764 467899998653211 0001123456778888887742 43 4455554 3445689
Q ss_pred EEeccCCC
Q 047901 584 VYEYINRG 591 (786)
Q Consensus 584 v~e~~~~g 591 (786)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 425
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.86 E-value=6.2e-05 Score=79.53 Aligned_cols=141 Identities=20% Similarity=0.282 Sum_probs=79.1
Q ss_pred eeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcC-----CCccccee-e--EEecCCeeeE
Q 047901 512 YCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIR-----HRNIVKFY-G--FCSHVRHSFV 583 (786)
Q Consensus 512 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-----hpniv~l~-~--~~~~~~~~~l 583 (786)
+.++.|..+.||+....++ .+++|+... .. ..+..|.++++.+. .|.++... | +....+..++
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~-----~~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~ 108 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHR-----PE---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFV 108 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECS-----CH---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCC-----CH---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEE
Confidence 4466677899999987654 589998864 11 22334455544442 24443311 1 1234667899
Q ss_pred EEeccCCCCHH--------------HHhhc---CCC-C-------CCCCHHHH---------------------------
Q 047901 584 VYEYINRGSLA--------------TVLSN---NFA-S-------EDFDWRKR--------------------------- 611 (786)
Q Consensus 584 v~e~~~~g~L~--------------~~l~~---~~~-~-------~~~~~~~~--------------------------- 611 (786)
||||++|..+. ..++. ... . ....|...
T Consensus 109 l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 188 (346)
T 2q83_A 109 VYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLY 188 (346)
T ss_dssp EEECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHH
T ss_pred EEEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHH
Confidence 99999986542 11111 000 0 01123211
Q ss_pred ----HHHHHHHHHHHHHHhh----------CCCCCeEEcCCCCCceeeCCCCcEEEecccccee
Q 047901 612 ----MNVITGVADALSYMHH----------DCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKL 661 (786)
Q Consensus 612 ----~~i~~~ia~~l~~LH~----------~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~ 661 (786)
..+...+..++.+|+. ...+.++|+|+++.||+++.++.+.|+||+.+..
T Consensus 189 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 189 LQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 1111223445666653 1235899999999999998888999999998753
No 426
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.86 E-value=0.0001 Score=76.19 Aligned_cols=139 Identities=18% Similarity=0.194 Sum_probs=93.0
Q ss_pred cceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcC---CCcccceeeEEecCCeeeEEEe
Q 047901 510 AKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIR---HRNIVKFYGFCSHVRHSFVVYE 586 (786)
Q Consensus 510 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~---hpniv~l~~~~~~~~~~~lv~e 586 (786)
..+.++.|....+|+... +++.+++|+... .....+..|.+.++.+. ...+.++++++...+..++|||
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~-------~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme 111 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINER-------SYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLE 111 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEG-------GGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEE
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCc-------ccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEE
Confidence 346789999999999987 467888998643 23567888999888883 3678889999888888999999
Q ss_pred ccCCCCHHH-----------HhhcCCCCC-------------------CCCHHHHH---HHHH----------------H
Q 047901 587 YINRGSLAT-----------VLSNNFASE-------------------DFDWRKRM---NVIT----------------G 617 (786)
Q Consensus 587 ~~~~g~L~~-----------~l~~~~~~~-------------------~~~~~~~~---~i~~----------------~ 617 (786)
|+++..+.. .++...... .-+|.... ++.. .
T Consensus 112 ~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~ 191 (312)
T 3jr1_A 112 ALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDL 191 (312)
T ss_dssp CCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHH
T ss_pred eccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHH
Confidence 999876421 122211100 12454322 1111 1
Q ss_pred HHHH-HHHHhh-CCCCCeEEcCCCCCceeeCCCCcEEEeccc
Q 047901 618 VADA-LSYMHH-DCFPPIVHRDISSNNVLLDLEYEARVSDFG 657 (786)
Q Consensus 618 ia~~-l~~LH~-~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg 657 (786)
++.. ...|.. ...|.++|+|+.+.|++++.++ +.|.||+
T Consensus 192 l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 192 IVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1111 223422 2346899999999999999887 8899984
No 427
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.71 E-value=1.2e-05 Score=74.95 Aligned_cols=83 Identities=11% Similarity=0.082 Sum_probs=40.2
Q ss_pred cCceeccccccccccchhhhhcccCCcEEEecccc-cCCCcchHHhhh----cCcCeeeccCCc-cCCCCCccccccccc
Q 047901 289 ELEYFDLSSNRLNNSILEALGFMFKLFYLNFSHNQ-FSQEIPEDLALL----AHLSELDLSHNL-FKGSIPSRICNLESL 362 (786)
Q Consensus 289 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l----~~L~~L~L~~N~-l~~~~~~~~~~l~~L 362 (786)
+|+.||++++.|+......+..+++|+.|+|++|. |+..--..+..+ ++|++|+|++|. |+..--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45555555555555444445555555566665553 432211222221 245566666553 443222334455556
Q ss_pred ceecccccc
Q 047901 363 EKLNLSHNN 371 (786)
Q Consensus 363 ~~L~L~~N~ 371 (786)
+.|+++++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 666665553
No 428
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.66 E-value=2.4e-05 Score=72.89 Aligned_cols=35 Identities=14% Similarity=0.079 Sum_probs=19.5
Q ss_pred ccccEEEeecccccccCCCCccccccccccccccc
Q 047901 240 SQLHVLDLSSNHIAGEIPMELGRLISLNKLILRGN 274 (786)
Q Consensus 240 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N 274 (786)
.+|+.|||+++.|+..--..+.++++|+.|+|++|
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 45777777776665443333444555555555555
No 429
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.63 E-value=0.0004 Score=75.58 Aligned_cols=78 Identities=12% Similarity=0.166 Sum_probs=46.2
Q ss_pred cceeeccccCceEEEEEcCCCCEEEEEEcCCCCC--CCc---hhhHHHHHHHHHHHh-hcCCCcccceeeEEecCCeeeE
Q 047901 510 AKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFP--NDQ---MSDQKEFLNEIKALT-KIRHRNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 510 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~---~~~~~~~~~e~~~l~-~l~hpniv~l~~~~~~~~~~~l 583 (786)
..+.+|.|..+.||++.. +++.++||....... ... ......+..|+..+. ......+.+++.+. .+..++
T Consensus 38 ~i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~l 114 (420)
T 2pyw_A 38 VIKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALI 114 (420)
T ss_dssp EEEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEE
T ss_pred EEEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEE
Confidence 346789999999999975 467899995332111 000 012223333433322 22234566777765 466789
Q ss_pred EEecc-CC
Q 047901 584 VYEYI-NR 590 (786)
Q Consensus 584 v~e~~-~~ 590 (786)
||||+ ++
T Consensus 115 v~e~l~~g 122 (420)
T 2pyw_A 115 GMRYLEPP 122 (420)
T ss_dssp EECCCCTT
T ss_pred EEeecCCc
Confidence 99999 76
No 430
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.59 E-value=0.00017 Score=74.01 Aligned_cols=79 Identities=16% Similarity=0.218 Sum_probs=56.3
Q ss_pred cCccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCC---CcccceeeEEecCCeeeE
Q 047901 507 DFDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRH---RNIVKFYGFCSHVRHSFV 583 (786)
Q Consensus 507 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h---pniv~l~~~~~~~~~~~l 583 (786)
+....+.+|.|..+.||+.+..||+.|+||+-.... ......|..|.+.|+.+.- --+.+++++. ..++
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~----~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~l 87 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDA----PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTL 87 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTC----CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEE
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCC----cchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceE
Confidence 455667899999999999999999999999865421 1222357789998888842 2345555542 3478
Q ss_pred EEeccCCCCH
Q 047901 584 VYEYINRGSL 593 (786)
Q Consensus 584 v~e~~~~g~L 593 (786)
||||++++..
T Consensus 88 v~e~l~~~~~ 97 (288)
T 3f7w_A 88 AMEWVDERPP 97 (288)
T ss_dssp EEECCCCCCC
T ss_pred EEEeecccCC
Confidence 9999987643
No 431
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.53 E-value=3.7e-05 Score=72.99 Aligned_cols=83 Identities=12% Similarity=0.052 Sum_probs=38.9
Q ss_pred CCCCcEEECCCC-Cccc----cCchhccCCCCCCEEeCcCCcccccC----CccccCCCCCCEEeCCCccCcc-----cC
Q 047901 25 FPHLAYLDLSIN-GFFG----TLPPQVRNLSKLKYLDLSENELSGKI----PPEIGLLTHLFSLDLSLNQFSG-----TF 90 (786)
Q Consensus 25 l~~L~~L~L~~n-~i~~----~~~~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~-----~~ 90 (786)
-+.|+.|+|++| +|.. .+-+++..-+.|+.|+|++|+|.... ..++..-+.|++|+|++|+|+. +.
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala 119 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 119 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHH
Confidence 345555566553 4432 12333444455555555555554221 2223344555555555555542 11
Q ss_pred CCCCCCCCCcEEEccCC
Q 047901 91 PPICNLSNLKYISLHNN 107 (786)
Q Consensus 91 ~~~~~l~~L~~L~L~~N 107 (786)
..+..-+.|++|+|++|
T Consensus 120 ~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 120 RSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHTTTTCCCSEEECCCC
T ss_pred HHHhhCCceeEEECCCC
Confidence 22334445555555543
No 432
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.23 E-value=0.0011 Score=69.63 Aligned_cols=142 Identities=16% Similarity=0.147 Sum_probs=74.5
Q ss_pred eeccccCc-eEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcC-C-CcccceeeEEecCCeeeEEEeccC
Q 047901 513 CIGKGEHR-SVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIR-H-RNIVKFYGFCSHVRHSFVVYEYIN 589 (786)
Q Consensus 513 ~ig~G~~g-~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h-pniv~l~~~~~~~~~~~lv~e~~~ 589 (786)
.++.|+.. ++|+....+++.+++|....... ..+..|+++++.+. + -.+.+++.+....+ ++|||++.
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~-------~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~ 95 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG-------GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLG 95 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTTT-------CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCC
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCCC-------ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCC
Confidence 45555444 37787764467777776543110 12335666666553 2 23556776654433 78999998
Q ss_pred CCCHHHHhhcC---------------------CC--CCCCCHHHHH-------H-H------------HHHHHHHHHHHh
Q 047901 590 RGSLATVLSNN---------------------FA--SEDFDWRKRM-------N-V------------ITGVADALSYMH 626 (786)
Q Consensus 590 ~g~L~~~l~~~---------------------~~--~~~~~~~~~~-------~-i------------~~~ia~~l~~LH 626 (786)
+..+.+++... .. ...++..... . + ...+...+..+.
T Consensus 96 ~~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~ 175 (333)
T 3csv_A 96 DALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQIL 175 (333)
T ss_dssp SCBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred CcchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 76665444211 00 0112211100 0 0 011112222221
Q ss_pred h---CCCCCeEEcCCCCCceeeCCC----CcEEEeccccceecC
Q 047901 627 H---DCFPPIVHRDISSNNVLLDLE----YEARVSDFGTAKLLK 663 (786)
Q Consensus 627 ~---~~~~~ivHrdlk~~Nill~~~----~~~kl~Dfg~a~~~~ 663 (786)
. ...+.++|||+.+.||+++.+ +.+.|+||+.+....
T Consensus 176 ~~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~ 219 (333)
T 3csv_A 176 SAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGH 219 (333)
T ss_dssp HHHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEEC
T ss_pred HhcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCC
Confidence 1 123479999999999999875 689999999987654
No 433
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.23 E-value=0.0016 Score=67.09 Aligned_cols=143 Identities=15% Similarity=0.097 Sum_probs=76.1
Q ss_pred CccceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcc-cceeeEEecCCeeeEEEe
Q 047901 508 FDAKYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNI-VKFYGFCSHVRHSFVVYE 586 (786)
Q Consensus 508 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpni-v~l~~~~~~~~~~~lv~e 586 (786)
+...+.++.|....+|+. +.+++|+........ -...+|..+++.+....+ .+++++. .+.-++|+|
T Consensus 20 ~~~i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~-----~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e 87 (301)
T 3dxq_A 20 YTGPLERLGGLTNLVFRA-----GDLCLRIPGKGTEEY-----INRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTR 87 (301)
T ss_dssp CCSCEEEESCSSEEEEEE-----TTEEEEEECC----C-----CCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEE
T ss_pred ccceeEcCCcccccccee-----eeEEEECCCCCccce-----eCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEe
Confidence 333678999999999999 568888876421110 112357777766632222 4555543 334578999
Q ss_pred cc-CCCCHHH------------------HhhcCCC--CCCCC-HHHHHHHHHH--------------HHHHH----HHHh
Q 047901 587 YI-NRGSLAT------------------VLSNNFA--SEDFD-WRKRMNVITG--------------VADAL----SYMH 626 (786)
Q Consensus 587 ~~-~~g~L~~------------------~l~~~~~--~~~~~-~~~~~~i~~~--------------ia~~l----~~LH 626 (786)
|+ ++.++.. .++.... ..... +.....+... +.+.+ ..+.
T Consensus 88 ~i~~g~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 167 (301)
T 3dxq_A 88 YIAGAQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALA 167 (301)
T ss_dssp CCTTCEECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHH
T ss_pred ecCCCccCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHH
Confidence 99 6544421 0111100 00011 1111111100 11111 1111
Q ss_pred h-CCCCCeEEcCCCCCceeeCCCCcEEEeccccceecC
Q 047901 627 H-DCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK 663 (786)
Q Consensus 627 ~-~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 663 (786)
. ...+.++|+|+.+.||+ ..++.+.++||..+....
T Consensus 168 ~~~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g~ 204 (301)
T 3dxq_A 168 AHPLPLAACHCDPLCENFL-DTGERMWIVDWEYSGMND 204 (301)
T ss_dssp SSCCCCEEECSCCCGGGEE-ECSSCEEECCCTTCEEEC
T ss_pred hcCCCceeeccCCCcCCEE-ECCCCEEEEecccccCCC
Confidence 1 12245899999999999 556778999999887543
No 434
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.22 E-value=0.00046 Score=61.13 Aligned_cols=55 Identities=16% Similarity=0.156 Sum_probs=39.6
Q ss_pred EEeCCCccCc--ccCCCCCCCCCCcEEEccCCcCcccCchhhcccCCcceecccccccc
Q 047901 78 SLDLSLNQFS--GTFPPICNLSNLKYISLHNNKLSGSIPEEIGNLMKLSYLMLDTNQFT 134 (786)
Q Consensus 78 ~L~Ls~N~l~--~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 134 (786)
.++.+++.++ .++..+. ++|++|+|++|+|+.+.++.|..+++|++|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5666777766 5554432 46778888888888777777888888888888888764
No 435
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.21 E-value=9.4e-05 Score=70.19 Aligned_cols=15 Identities=13% Similarity=0.038 Sum_probs=7.5
Q ss_pred CCCCCCCEEeccCCc
Q 047901 189 GIYPNLKFLDLSHNN 203 (786)
Q Consensus 189 ~~l~~L~~L~L~~N~ 203 (786)
..-+.|++|+++.|.
T Consensus 154 ~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 154 EENESLLRVGISFAS 168 (197)
T ss_dssp HHCSSCCEEECCCCC
T ss_pred HhCCCcCeEeccCCC
Confidence 334455555555444
No 436
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.10 E-value=0.0049 Score=64.31 Aligned_cols=143 Identities=11% Similarity=0.155 Sum_probs=81.3
Q ss_pred eeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCC--cccceeeE-----EecCCeeeEE
Q 047901 512 YCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHR--NIVKFYGF-----CSHVRHSFVV 584 (786)
Q Consensus 512 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hp--niv~l~~~-----~~~~~~~~lv 584 (786)
..++ |....||+....+|+.+++|...... .....+..|.+++..+... .+++++.. ....+..++|
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-----~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l 105 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER-----WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAV 105 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTT-----SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEE
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCC-----CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEE
Confidence 3566 88889999887777789999986321 1234566777777776321 24444432 2234566889
Q ss_pred EeccCCCCHH-----HH---------hhcC---CC---CCCCCHHHH----HHH---------------HHHHHHHHHHH
Q 047901 585 YEYINRGSLA-----TV---------LSNN---FA---SEDFDWRKR----MNV---------------ITGVADALSYM 625 (786)
Q Consensus 585 ~e~~~~g~L~-----~~---------l~~~---~~---~~~~~~~~~----~~i---------------~~~ia~~l~~L 625 (786)
|||++|..+. .+ ++.. .. ....++... ..+ ...+...+..+
T Consensus 106 ~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 185 (328)
T 1zyl_A 106 FPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAV 185 (328)
T ss_dssp EECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHH
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHH
Confidence 9999875431 10 1110 00 011222111 001 11111222233
Q ss_pred hhC----CCCCeEEcCCCCCceeeCCCCcEEEeccccceec
Q 047901 626 HHD----CFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLL 662 (786)
Q Consensus 626 H~~----~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~ 662 (786)
... ..+.++|+|+++.||+++ + .+.++||+.+...
T Consensus 186 ~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~g 224 (328)
T 1zyl_A 186 TAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARNG 224 (328)
T ss_dssp HHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCEE
T ss_pred HHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCcC
Confidence 221 234689999999999999 5 8999999887644
No 437
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.01 E-value=0.0039 Score=64.87 Aligned_cols=157 Identities=10% Similarity=0.130 Sum_probs=85.1
Q ss_pred HHHHHHHhccCcc-----ceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCc--ccc
Q 047901 498 YEEIIRRTKDFDA-----KYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRN--IVK 570 (786)
Q Consensus 498 ~~~~~~~~~~~~~-----~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpn--iv~ 570 (786)
.+++......|.. .+.++.|....+|+....++ .+++|...... ....+..|.+++..+.... +.+
T Consensus 9 ~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~------~~~~l~~e~~~l~~L~~~g~~vP~ 81 (322)
T 2ppq_A 9 EDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV------EKNDLPFFLGLMQHLAAKGLSCPL 81 (322)
T ss_dssp HHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC---------CCHHHHHHHHHHHHHHTTCCCCC
T ss_pred HHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC------CHHHHHHHHHHHHHHHHCCCCCCc
Confidence 3455555555654 23567788889999987655 68899886421 1123446677666653111 333
Q ss_pred eeeE------EecCCeeeEEEeccCCCCHHH--------------HhhcC---CCCCC------CCHHHHHH--------
Q 047901 571 FYGF------CSHVRHSFVVYEYINRGSLAT--------------VLSNN---FASED------FDWRKRMN-------- 613 (786)
Q Consensus 571 l~~~------~~~~~~~~lv~e~~~~g~L~~--------------~l~~~---~~~~~------~~~~~~~~-------- 613 (786)
++.. ....+..++||+|++|..+.. .++.. ..... ..|.....
T Consensus 82 ~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 161 (322)
T 2ppq_A 82 PLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADE 161 (322)
T ss_dssp BCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGG
T ss_pred ccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHh
Confidence 3321 123456789999999864311 11111 00000 11222110
Q ss_pred ----HHHHHHHHHHHHhhC----CCCCeEEcCCCCCceeeCCCCcEEEecccccee
Q 047901 614 ----VITGVADALSYMHHD----CFPPIVHRDISSNNVLLDLEYEARVSDFGTAKL 661 (786)
Q Consensus 614 ----i~~~ia~~l~~LH~~----~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~ 661 (786)
+...+.+.++++++. ..++++|+|+.+.||+++.++.+.++||+.+..
T Consensus 162 ~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 162 VEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp TSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 011234445555432 124799999999999999876678999988764
No 438
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.93 E-value=0.0032 Score=66.83 Aligned_cols=142 Identities=15% Similarity=0.229 Sum_probs=83.3
Q ss_pred eeeccccCceEEEEEcCC--------CCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcC-CCcccceeeEEecCCeee
Q 047901 512 YCIGKGEHRSVYRAKLPS--------GDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIR-HRNIVKFYGFCSHVRHSF 582 (786)
Q Consensus 512 ~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-hpniv~l~~~~~~~~~~~ 582 (786)
+.+..|-...+|+....+ ++.+++|+... .........+|..+++.+. +.-..++++++.+ .
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~-----~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g 126 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA-----ILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----G 126 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC--------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----E
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC-----ccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----c
Confidence 457778888999998752 47899988532 1122345568988888774 3334667776654 2
Q ss_pred EEEeccCCCCHHHH-----------------hhcCC--CCCCCC--HHHHHHHHHHHHH-------------------HH
Q 047901 583 VVYEYINRGSLATV-----------------LSNNF--ASEDFD--WRKRMNVITGVAD-------------------AL 622 (786)
Q Consensus 583 lv~e~~~~g~L~~~-----------------l~~~~--~~~~~~--~~~~~~i~~~ia~-------------------~l 622 (786)
+||||++|..+..- ++... ..+... +.++.++..++.. .+
T Consensus 127 ~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~ 206 (379)
T 3feg_A 127 RLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEM 206 (379)
T ss_dssp EEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHH
T ss_pred cEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHH
Confidence 89999998554310 11110 011222 4555555544322 12
Q ss_pred HH----HhhC-CCCCeEEcCCCCCceeeCCC----CcEEEeccccceec
Q 047901 623 SY----MHHD-CFPPIVHRDISSNNVLLDLE----YEARVSDFGTAKLL 662 (786)
Q Consensus 623 ~~----LH~~-~~~~ivHrdlk~~Nill~~~----~~~kl~Dfg~a~~~ 662 (786)
.+ |... ....++|+|+.+.||+++.+ +.+.++||..|...
T Consensus 207 ~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~~ 255 (379)
T 3feg_A 207 GNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSYN 255 (379)
T ss_dssp HHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEEE
T ss_pred HHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCcC
Confidence 22 2221 22469999999999999876 78999999988643
No 439
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.93 E-value=0.0012 Score=58.51 Aligned_cols=55 Identities=22% Similarity=0.112 Sum_probs=34.2
Q ss_pred EEEccCcccc--cccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCcccC
Q 047901 172 RAHLGRNNLT--GNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGNNIT 229 (786)
Q Consensus 172 ~L~L~~N~l~--~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 229 (786)
.++.+++.++ .++.. + .++|++|+|++|+|+.+.++.|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~-l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTA-F--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSC-C--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCC-C--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4555555555 33321 1 235777777777777777777777777777777777654
No 440
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.89 E-value=0.0018 Score=70.42 Aligned_cols=73 Identities=21% Similarity=0.295 Sum_probs=49.0
Q ss_pred ceeeccccCceEEEEEcCC--------CCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcC-CCcccceeeEEecCCee
Q 047901 511 KYCIGKGEHRSVYRAKLPS--------GDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIR-HRNIVKFYGFCSHVRHS 581 (786)
Q Consensus 511 ~~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-hpniv~l~~~~~~~~~~ 581 (786)
.+.|+.|....+|+....+ ++.+++|+...+ . ....+..|..+++.+. +.-..++++.+.+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~----~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~~---- 147 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP----E--TESHLVAESVIFTLLSERHLGPKLYGIFSG---- 147 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC----C--CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC----C--cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----
Confidence 3568888889999998653 478999987431 1 1134557888888874 3334567776543
Q ss_pred eEEEeccCCCCH
Q 047901 582 FVVYEYINRGSL 593 (786)
Q Consensus 582 ~lv~e~~~~g~L 593 (786)
.+|+||++|.++
T Consensus 148 g~v~e~l~G~~l 159 (429)
T 1nw1_A 148 GRLEEYIPSRPL 159 (429)
T ss_dssp EEEECCCCEEEC
T ss_pred CEEEEEeCCccc
Confidence 389999986433
No 441
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.58 E-value=0.011 Score=64.50 Aligned_cols=74 Identities=19% Similarity=0.190 Sum_probs=46.5
Q ss_pred ceeeccccCceEEEEEcCC-CCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcc-cceeeEEecCCeeeEEEecc
Q 047901 511 KYCIGKGEHRSVYRAKLPS-GDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNI-VKFYGFCSHVRHSFVVYEYI 588 (786)
Q Consensus 511 ~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpni-v~l~~~~~~~~~~~lv~e~~ 588 (786)
.+.|+.|-...+|+....+ ++.+++|+...... ..-. -..|..+++.+...++ .++++++.. ..||||+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~--~~id---R~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I 183 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTD--EIIN---REREKKISCILYNKNIAKKIYVFFTN----GRIEEFM 183 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CC--SCSC---HHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChh--hhcC---HHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEee
Confidence 3568888889999998764 47888988743211 1111 1478888888864444 567776632 2599999
Q ss_pred CCCCH
Q 047901 589 NRGSL 593 (786)
Q Consensus 589 ~~g~L 593 (786)
+|.++
T Consensus 184 ~G~~l 188 (458)
T 2qg7_A 184 DGYAL 188 (458)
T ss_dssp CSEEC
T ss_pred CCccC
Confidence 87443
No 442
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.53 E-value=0.015 Score=60.80 Aligned_cols=33 Identities=27% Similarity=0.335 Sum_probs=28.8
Q ss_pred CCeEEcCCCCCceeeCCCCcEEEeccccceecC
Q 047901 631 PPIVHRDISSNNVLLDLEYEARVSDFGTAKLLK 663 (786)
Q Consensus 631 ~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~ 663 (786)
+.++|+|+.+.||+++.++.+.++||+.+....
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~~ 238 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLAP 238 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEEC
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeCC
Confidence 479999999999999988889999998876543
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.47 E-value=0.0046 Score=65.74 Aligned_cols=73 Identities=8% Similarity=0.154 Sum_probs=42.4
Q ss_pred eeeccccCceEEEEEcCC---------CCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCc-ccceeeEEecCCee
Q 047901 512 YCIGKGEHRSVYRAKLPS---------GDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRN-IVKFYGFCSHVRHS 581 (786)
Q Consensus 512 ~~ig~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpn-iv~l~~~~~~~~~~ 581 (786)
+.++.|....+|+....+ ++.+++|+..... ........|.++++.+...+ +.++++... -
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~-----~~~~~~~~E~~~l~~L~~~g~~P~~~~~~~----~ 109 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV-----DELYNTISEFEVYKTMSKYKIAPQLLNTFN----G 109 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG-----GGTSCHHHHHHHHHHHHHTTSSCCEEEEET----T
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc-----cceecHHHHHHHHHHHHhcCCCCceEEecC----C
Confidence 457788888999998654 2688888865311 11112346777777774223 446665442 3
Q ss_pred eEEEeccCCCCH
Q 047901 582 FVVYEYINRGSL 593 (786)
Q Consensus 582 ~lv~e~~~~g~L 593 (786)
++||||++|..+
T Consensus 110 ~~v~e~i~G~~l 121 (369)
T 3c5i_A 110 GRIEEWLYGDPL 121 (369)
T ss_dssp EEEEECCCSEEC
T ss_pred cEEEEEecCCcC
Confidence 689999987543
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.70 E-value=0.03 Score=59.60 Aligned_cols=146 Identities=15% Similarity=0.190 Sum_probs=82.5
Q ss_pred eeeccccCceEEEEEcCC--------CCEEEEEEcCCCCCC-----------Cchh---hHHHHHHHHHHHhhcC-CCcc
Q 047901 512 YCIGKGEHRSVYRAKLPS--------GDKIAVKKFNSPFPN-----------DQMS---DQKEFLNEIKALTKIR-HRNI 568 (786)
Q Consensus 512 ~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~-----------~~~~---~~~~~~~e~~~l~~l~-hpni 568 (786)
+.+..|-...+|+....+ .+.|.+++.-..... +... ..+....|..+++.+. +--.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 356667788999988754 367888886432110 0000 0112335888888774 4445
Q ss_pred cceeeEEecCCeeeEEEeccCCCCHHH--H---------------hhcC--CCCCCCC--HHHHHHHHHHHH--------
Q 047901 569 VKFYGFCSHVRHSFVVYEYINRGSLAT--V---------------LSNN--FASEDFD--WRKRMNVITGVA-------- 619 (786)
Q Consensus 569 v~l~~~~~~~~~~~lv~e~~~~g~L~~--~---------------l~~~--~~~~~~~--~~~~~~i~~~ia-------- 619 (786)
.++++++..+ +|+||++|-+|.. + ++.. ....... +..+.++..++.
T Consensus 138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 6677776532 8999998754421 1 1111 0112222 234444443321
Q ss_pred --------------HHH----HHHhhC-CCCCeEEcCCCCCceeeCCC------CcEEEecccccee
Q 047901 620 --------------DAL----SYMHHD-CFPPIVHRDISSNNVLLDLE------YEARVSDFGTAKL 661 (786)
Q Consensus 620 --------------~~l----~~LH~~-~~~~ivHrdlk~~Nill~~~------~~~kl~Dfg~a~~ 661 (786)
+-+ .++... ....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 112 223222 22468999999999999877 7899999988764
No 445
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=95.17 E-value=0.047 Score=51.96 Aligned_cols=103 Identities=16% Similarity=0.093 Sum_probs=64.7
Q ss_pred CCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccceecCCCCCcce
Q 047901 591 GSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLLKPNSSNWT 670 (786)
Q Consensus 591 g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 670 (786)
-+|.+.|+.. ..++++.+++.++.|.+.+|.-+-.... + ..+=+-|..|++..+|.+...+ +.+.
T Consensus 33 vSL~eIL~~~--~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~---------- 97 (229)
T 2yle_A 33 LSLEEILRLY--NQPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD---------- 97 (229)
T ss_dssp EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred ccHHHHHHHc--CCCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc----------
Confidence 4789999875 5789999999999999999877622111 1 1223356888999899887764 1111
Q ss_pred eeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCC
Q 047901 671 ELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHP 721 (786)
Q Consensus 671 ~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~P 721 (786)
.....+.|||.. ....+.+.=|||+|+++|.-+--..|
T Consensus 98 --~~~~~~~~pe~~-----------~~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 --AGEPPPVAGKLG-----------YSQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp -----------CCS-----------SSSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred --ccccCCCChhhc-----------cccchHHHHHHHHHHHHHHHhhcCCC
Confidence 122346678532 12345678899999999998854333
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.98 E-value=0.15 Score=54.75 Aligned_cols=142 Identities=11% Similarity=0.115 Sum_probs=82.2
Q ss_pred ceeeccccCceEEEEEcCC--------CCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcC-CCcccceeeEEecCCee
Q 047901 511 KYCIGKGEHRSVYRAKLPS--------GDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIR-HRNIVKFYGFCSHVRHS 581 (786)
Q Consensus 511 ~~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-hpniv~l~~~~~~~~~~ 581 (786)
.+.+..|-...+|+....+ ++.+++|+...... ... .-.+|..+++.+. +.-..++++.+. -
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~--~~i---dR~~E~~~l~~L~~~gi~P~l~~~~~----~ 145 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVG--KFY---DSKVELDVFRYLSNINIAPNIIADFP----E 145 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC---CCC---CHHHHHHHHHHHHHTTSSCCEEEEET----T
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcc--hhc---CHHHHHHHHHHHHhcCCCCCEEEEcC----C
Confidence 3467778888999998653 57899988644211 111 1236777777764 333455665432 2
Q ss_pred eEEEeccCCCCHHH--------------Hh---hcC-------C---CCCCCCHHHHHHHHHHH----------------
Q 047901 582 FVVYEYINRGSLAT--------------VL---SNN-------F---ASEDFDWRKRMNVITGV---------------- 618 (786)
Q Consensus 582 ~lv~e~~~~g~L~~--------------~l---~~~-------~---~~~~~~~~~~~~i~~~i---------------- 618 (786)
+.||||++|..+.. .+ +.. . ...+.-+.++.++..++
T Consensus 146 ~~I~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~ 225 (424)
T 3mes_A 146 GRIEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELY 225 (424)
T ss_dssp EEEEECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHH
T ss_pred CEEEEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccH
Confidence 78999999865321 00 100 0 11111244443333222
Q ss_pred ---HHHHHHHhh---------------------CCCCCeEEcCCCCCceeeCCCCcEEEeccccceec
Q 047901 619 ---ADALSYMHH---------------------DCFPPIVHRDISSNNVLLDLEYEARVSDFGTAKLL 662 (786)
Q Consensus 619 ---a~~l~~LH~---------------------~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~~~ 662 (786)
...+.+|.+ .....++|+|+.+.||+ +.++.+.++||..|...
T Consensus 226 ~~l~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~~ 292 (424)
T 3mes_A 226 SKILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAIN 292 (424)
T ss_dssp HHHHHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred HHHHHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCcC
Confidence 122233321 11236899999999999 77889999999988743
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.42 E-value=0.65 Score=49.55 Aligned_cols=31 Identities=23% Similarity=0.297 Sum_probs=26.1
Q ss_pred CeEEcCCCCCceee------CCCCcEEEeccccceec
Q 047901 632 PIVHRDISSNNVLL------DLEYEARVSDFGTAKLL 662 (786)
Q Consensus 632 ~ivHrdlk~~Nill------~~~~~~kl~Dfg~a~~~ 662 (786)
.++|+|+.+.||++ +++..++++||-+|..-
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~n 281 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYN 281 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccCC
Confidence 46899999999999 45678999999988743
No 448
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=89.37 E-value=0.33 Score=32.92 Aligned_cols=29 Identities=31% Similarity=0.385 Sum_probs=14.7
Q ss_pred eehhhHHHHHHHHHHHHHHHhheeeeccc
Q 047901 441 LILFPLLGALALLIVYVVMVFMFRRWKRD 469 (786)
Q Consensus 441 ~i~~~~~~~~~~~~~~~~~~~~~~r~~~~ 469 (786)
.|+..++++++++++++..+++++|+++.
T Consensus 12 ~IA~gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred eEEeehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 46666666555554444444444444333
No 449
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=88.02 E-value=1 Score=42.81 Aligned_cols=117 Identities=7% Similarity=0.081 Sum_probs=79.6
Q ss_pred CCCcccceeeEEecCCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEEcCCCCCce
Q 047901 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALSYMHHDCFPPIVHRDISSNNV 643 (786)
Q Consensus 564 ~hpniv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivHrdlk~~Ni 643 (786)
.||+.++. .+-..++.+.+.++.-+. ...|-. -...+...+++++..|+....+++.+ +|--+.|+|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~--~~~f~~----ik~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~NL 110 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDN--HTPFDN----IKSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDEL 110 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTT--SEEGGG----GGGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGGE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcc--cCCHHH----HHhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecceE
Confidence 58888876 566666666555554432 222221 13467889999999999988777765 8889999999
Q ss_pred eeCCCCcEEEeccccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCCC
Q 047901 644 LLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPGD 723 (786)
Q Consensus 644 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf~ 723 (786)
+++.++.+++.=.|+-..+ +|. ..++..=.-.+=+++..+++++..|+
T Consensus 111 ~f~~~~~p~i~~RGik~~l-----------------~P~---------------~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 111 FFTRDGLPIAKTRGLQNVV-----------------DPL---------------PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EECTTSCEEESCCEETTTB-----------------SCC---------------CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEcCCCCEEEEEccCccCC-----------------CCC---------------CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999977764322 331 01111112346778889999998876
Q ss_pred c
Q 047901 724 F 724 (786)
Q Consensus 724 ~ 724 (786)
.
T Consensus 159 ~ 159 (215)
T 4ann_A 159 A 159 (215)
T ss_dssp H
T ss_pred H
Confidence 3
No 450
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=82.42 E-value=0.8 Score=30.95 Aligned_cols=27 Identities=26% Similarity=0.432 Sum_probs=12.4
Q ss_pred eehhhHHHHHHHHHHHHHHHhheeeec
Q 047901 441 LILFPLLGALALLIVYVVMVFMFRRWK 467 (786)
Q Consensus 441 ~i~~~~~~~~~~~~~~~~~~~~~~r~~ 467 (786)
.|+..++++++++++++..+++++|++
T Consensus 11 aIA~gVVgGv~~v~ii~~~~~~~~RRR 37 (44)
T 2l2t_A 11 LIAAGVIGGLFILVIVGLTFAVYVRRK 37 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eEEEeehHHHHHHHHHHHHHHHHhhhh
Confidence 355555554554444444433444333
No 451
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=79.85 E-value=4.7 Score=38.34 Aligned_cols=116 Identities=9% Similarity=0.015 Sum_probs=78.0
Q ss_pred CCCcccceeeEEecCCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHH-HHhhCCCCCeEEcCCCCCc
Q 047901 564 RHRNIVKFYGFCSHVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGVADALS-YMHHDCFPPIVHRDISSNN 642 (786)
Q Consensus 564 ~hpniv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~ia~~l~-~LH~~~~~~ivHrdlk~~N 642 (786)
.||++ -..+-.+++...+.++--+++.=+..+ ...+...+++++..++.... +++.+ +|--+.|+|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i------~~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~N 114 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI------RKTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPEN 114 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH------HTSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH------HhcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCce
Confidence 57877 344446667766666655443333333 24678899999999988877 67655 888999999
Q ss_pred eeeCCCCcEEEeccccceecCCCCCcceeeccCccccCCCCCCCCchHHHHhhhcCcCcccchHHHHHHHHHHHhCCCCC
Q 047901 643 VLLDLEYEARVSDFGTAKLLKPNSSNWTELVGTFGYVAPAHGNIGLHLAELAYTMKITEKCDVYSFGVLALEVIKGKHPG 722 (786)
Q Consensus 643 ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~e~~~~~~~~~~sDvwslGvil~elltg~~Pf 722 (786)
++++.++.+++.=.|+-. -++|..+ ++.-=.-.+=+++..++.++..|
T Consensus 115 L~f~~~~~p~i~hRGi~~-----------------~lpP~e~---------------~ee~fl~qyKali~all~~K~~F 162 (219)
T 4ano_A 115 LMFNRALEPFFLHVGVKE-----------------SLPPDEW---------------DDERLLREVKATVLALTEGEYRF 162 (219)
T ss_dssp EEECTTCCEEESCCEETT-----------------TBSSCSC---------------CHHHHHHHHHHHHHHHTTCSSCH
T ss_pred EEEeCCCcEEEEEcCCcc-----------------cCCCCCC---------------CHHHHHHHHHHHHHHHHcCCCCH
Confidence 999999999999777532 2344211 11111234677888888888886
Q ss_pred Cc
Q 047901 723 DF 724 (786)
Q Consensus 723 ~~ 724 (786)
+.
T Consensus 163 e~ 164 (219)
T 4ano_A 163 DE 164 (219)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 452
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=79.15 E-value=4.1 Score=33.44 Aligned_cols=48 Identities=17% Similarity=0.215 Sum_probs=29.7
Q ss_pred cccccccCcccCCCCCCCEEeccCCccccccCcCccCCCCccEEEccCc
Q 047901 178 NNLTGNISEDFGIYPNLKFLDLSHNNFYGEISSNWGKCHRLGTLIVSGN 226 (786)
Q Consensus 178 N~l~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N 226 (786)
..++.|...+|.++.+|+.+.+-.+ ++.+...+|.++.+|+.+.+...
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred CccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 3455566666777777777766653 44466666666666666666543
No 453
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=75.97 E-value=0.38 Score=52.37 Aligned_cols=61 Identities=7% Similarity=-0.075 Sum_probs=17.0
Q ss_pred ceeeccccCceEEEEEcCC-CCEEEE------EEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeEEe
Q 047901 511 KYCIGKGEHRSVYRAKLPS-GDKIAV------KKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGFCS 576 (786)
Q Consensus 511 ~~~ig~G~~g~Vy~~~~~~-~~~vav------K~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~~~ 576 (786)
.+.+| ||.||+|.+.. ..+||| |..+... ...+....|.+|..+++..+|||+++.+++..
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~--~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDG--VSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-------------------------------------CBCCCEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCcccccccc--ccccccccccccccccccccccccCCCcceEE
Confidence 44565 99999998864 367888 6654311 12233457888999999999999999988764
No 454
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=68.66 E-value=10 Score=31.00 Aligned_cols=49 Identities=16% Similarity=0.074 Sum_probs=35.2
Q ss_pred CCccccccCcCccCCCCccEEEccCcccCCCCCccccCCccccEEEeecc
Q 047901 201 HNNFYGEISSNWGKCHRLGTLIVSGNNITGRIPPEIGNSSQLHVLDLSSN 250 (786)
Q Consensus 201 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 250 (786)
+..++.+...+|.++.+|+.+.+..+ ++.+...+|.++.+|+.+.+...
T Consensus 5 g~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 5 GEPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred CCccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 34566777778888888888888765 44466777777777877777654
No 455
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=61.66 E-value=4.5 Score=27.29 Aligned_cols=6 Identities=17% Similarity=0.584 Sum_probs=2.3
Q ss_pred hhhHHH
Q 047901 443 LFPLLG 448 (786)
Q Consensus 443 ~~~~~~ 448 (786)
+..+++
T Consensus 15 a~~vVG 20 (44)
T 2jwa_A 15 ISAVVG 20 (44)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333344
No 456
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=44.26 E-value=12 Score=24.41 Aligned_cols=10 Identities=30% Similarity=0.491 Sum_probs=3.8
Q ss_pred ehhhHHHHHH
Q 047901 442 ILFPLLGALA 451 (786)
Q Consensus 442 i~~~~~~~~~ 451 (786)
|.-+++++++
T Consensus 13 IAGiVvG~v~ 22 (38)
T 2k1k_A 13 IVAVIFGLLL 22 (38)
T ss_dssp HHHHHHHHHH
T ss_pred eeeeehHHHH
Confidence 3333334333
No 457
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=41.55 E-value=16 Score=24.06 Aligned_cols=11 Identities=18% Similarity=0.114 Sum_probs=4.2
Q ss_pred hhhHHHHHHHH
Q 047901 443 LFPLLGALALL 453 (786)
Q Consensus 443 ~~~~~~~~~~~ 453 (786)
+..++++++++
T Consensus 16 ~~~vv~Gv~ll 26 (41)
T 2k9y_A 16 IGGVAVGVVLL 26 (41)
T ss_dssp HHHHHHHHHHH
T ss_pred EeehhHHHHHH
Confidence 33333344433
No 458
>1zza_A Stannin, AG8_1; helix, membrane protein; NMR {Homo sapiens}
Probab=29.28 E-value=69 Score=23.74 Aligned_cols=29 Identities=31% Similarity=0.331 Sum_probs=12.3
Q ss_pred hHHHHHHHHHHHHHHHhheeeeccccCCC
Q 047901 445 PLLGALALLIVYVVMVFMFRRWKRDSQSQ 473 (786)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 473 (786)
.++.+++.+.+++..++++.|.++-.++.
T Consensus 19 viliavaalg~li~gcwcylrlqri~qse 47 (90)
T 1zza_A 19 VILIAIAALGALILGCWCYLRLQRISQSE 47 (90)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSSCSSCSSC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 33334443333333444444544444433
No 459
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=26.98 E-value=6.5e+02 Score=27.74 Aligned_cols=46 Identities=20% Similarity=0.143 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHH--HHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccce
Q 047901 608 WRKRMNVITGVAD--ALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAK 660 (786)
Q Consensus 608 ~~~~~~i~~~ia~--~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~ 660 (786)
+..+..++..+|. .+.|+=.- +|=.++|||++.+|++.=+|||.+.
T Consensus 454 ~~a~~nF~~S~A~ySvv~YILGi-------gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYILGV-------GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTC-------CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHHhHhheeeec-------cCCCCcceeEcCCCCEeeeehHHhh
Confidence 4555666665543 35555432 4667899999999999999999874
No 460
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=26.60 E-value=1.8e+02 Score=29.40 Aligned_cols=138 Identities=12% Similarity=0.086 Sum_probs=70.0
Q ss_pred ceeeccccCceEEEEEcCCCCEEEEEEcCCCCCCCchhhHHHHHHHHHHHhhcCCCcccceeeE-------------Ee-
Q 047901 511 KYCIGKGEHRSVYRAKLPSGDKIAVKKFNSPFPNDQMSDQKEFLNEIKALTKIRHRNIVKFYGF-------------CS- 576 (786)
Q Consensus 511 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~l~~~-------------~~- 576 (786)
.+..-.|. +.||.+.. ++..|+||-.. ....+.|-.+++..-.+.-|+..-+.-. +.
T Consensus 74 I~~s~~Gs-tgvff~~t-d~~~~VVK~s~-------~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~ 144 (342)
T 1cja_A 74 IERSEKGT-EGLFFVET-ESGVFIVKRST-------NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDK 144 (342)
T ss_dssp EEECCSTT-SCEEEEEE-SSCEEEEECCT-------THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCS
T ss_pred EEeccCCC-CCeEEEEe-CCCEEEEeCcH-------HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhh
Confidence 33445555 45665554 47789999431 1233445555555555666653222111 00
Q ss_pred --------cCCeeeEEEeccCCCCHHHHhhcCCCCCCCCHHHHHHHHHHH--HHHHHHHhhCCC-CCeEE-cCCCCCcee
Q 047901 577 --------HVRHSFVVYEYINRGSLATVLSNNFASEDFDWRKRMNVITGV--ADALSYMHHDCF-PPIVH-RDISSNNVL 644 (786)
Q Consensus 577 --------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~i--a~~l~~LH~~~~-~~ivH-rdlk~~Nil 644 (786)
.....+++|||.+|..|.+.-... ..+.+..+. ..++ +-++.+...+.+ .+.+. .--.+.|||
T Consensus 145 ~~~~l~~l~~~~~~l~meyv~G~~L~e~~~~~-~~~~f~~~~----~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL 219 (342)
T 1cja_A 145 SFRVITTLANQANILLMELVRGITLNKLTTTS-APEVLTKST----MQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIM 219 (342)
T ss_dssp SSCHHHHHTTCSEEEEEECCCEEESTTCCSSS-HHHHSCHHH----HHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEE
T ss_pred hhHHHHHhhcccceehhhhcCCCccccchhhh-hhhhcCHHH----HHhhchhheehhhhcCCccCcccccCCCChhheE
Confidence 112345999999876654321110 001122222 2222 233444444433 22222 235789999
Q ss_pred eCCCCc-EEEeccccceec
Q 047901 645 LDLEYE-ARVSDFGTAKLL 662 (786)
Q Consensus 645 l~~~~~-~kl~Dfg~a~~~ 662 (786)
++.+.. +.++|-+.+..-
T Consensus 220 ~~~~n~~~~~IDhn~af~~ 238 (342)
T 1cja_A 220 LSERGATVVPIDSKIIPLD 238 (342)
T ss_dssp EESBTTCEEECSCCCCCCC
T ss_pred EeCCCCeEEEEcCCccccC
Confidence 987655 889999998643
No 461
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=25.28 E-value=73 Score=23.35 Aligned_cols=11 Identities=27% Similarity=0.404 Sum_probs=4.6
Q ss_pred eeeeccccCCC
Q 047901 463 FRRWKRDSQSQ 473 (786)
Q Consensus 463 ~~r~~~~~~~~ 473 (786)
.++|.++++..
T Consensus 32 vkcrhRrrqAe 42 (70)
T 2klu_A 32 VRSRHRRRQAE 42 (70)
T ss_dssp HHSSCCSSSCT
T ss_pred hHHHHHHHHHH
Confidence 33444444433
No 462
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=23.79 E-value=6.4e+02 Score=28.31 Aligned_cols=45 Identities=22% Similarity=0.195 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHH--HHHHHhhCCCCCeEEcCCCCCceeeCCCCcEEEeccccce
Q 047901 609 RKRMNVITGVAD--ALSYMHHDCFPPIVHRDISSNNVLLDLEYEARVSDFGTAK 660 (786)
Q Consensus 609 ~~~~~i~~~ia~--~l~~LH~~~~~~ivHrdlk~~Nill~~~~~~kl~Dfg~a~ 660 (786)
..+..++..+|. .+.|+=.- +|=.++|||++.+|.+.=+|||.+.
T Consensus 529 ~ar~nF~~SlA~~Svv~YILGl-------GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLLGV-------GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC-------CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHccC-------CCCCCcceEEeCCCCEEEEeehhhh
Confidence 344555555443 24454322 5778999999999999999999874
Done!