Query 047902
Match_columns 720
No_of_seqs 224 out of 539
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 07:09:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047902.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047902hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2zws_A Neutral ceramidase; pri 100.0 9E-161 3E-165 1389.3 65.8 634 1-720 3-642 (646)
2 2p9r_A Alpha-2-M, alpha-2-macr 94.5 0.28 9.7E-06 42.8 10.7 74 612-698 11-85 (102)
3 4fxk_A Complement C4 beta chai 84.2 4.2 0.00014 46.4 11.2 81 600-698 120-201 (656)
4 2pn5_A TEP1R, thioester-contai 77.7 7.4 0.00025 48.7 10.9 84 600-698 100-184 (1325)
5 3hrz_A Cobra venom factor; ser 76.7 3.2 0.00011 47.9 6.7 77 600-697 104-181 (627)
6 4acq_A Alpha-2-macroglobulin; 70.9 18 0.00061 45.9 11.9 85 598-698 102-187 (1451)
7 2hr0_A Complement C3 beta chai 62.0 31 0.0011 39.5 10.7 82 600-697 106-188 (645)
8 3prx_B Cobra venom factor; imm 57.8 28 0.00095 44.7 10.1 80 599-698 125-204 (1642)
9 2c9r_A COPC, copper resistance 48.1 1.2E+02 0.0041 26.3 9.8 59 618-682 19-85 (102)
10 1lyq_A PCOC copper resistance 44.4 1.1E+02 0.0037 26.7 8.9 30 618-652 20-49 (104)
11 1vra_A Arginine biosynthesis b 41.7 37 0.0013 33.6 6.0 46 39-95 89-136 (208)
12 3cu7_A Complement C5; Mg domai 35.7 42 0.0014 43.1 6.7 82 599-697 123-205 (1676)
13 2vtc_A CEL61B, cellulase; hydr 34.7 5 0.00017 41.0 -1.6 87 613-701 90-184 (249)
14 2v4i_A Glutamate N-acetyltrans 34.6 35 0.0012 32.9 4.4 46 39-95 58-105 (173)
15 2b39_A C3; thioester, immune d 32.4 89 0.0031 40.0 8.9 82 600-697 127-209 (1661)
16 2v94_A RPS24, 30S ribosomal pr 31.9 56 0.0019 29.0 4.9 45 55-101 27-71 (107)
17 1xn9_A 30S ribosomal protein S 30.5 63 0.0022 28.4 5.0 35 65-101 28-62 (101)
18 2dle_A Receptor-type tyrosine- 29.5 40 0.0014 29.0 3.6 25 673-698 21-48 (104)
19 3zxn_A RSBS, anti-sigma-factor 29.5 81 0.0028 28.0 5.8 47 465-518 5-51 (123)
20 1ywx_A 30S ribosomal protein S 28.3 57 0.002 28.7 4.3 35 65-101 28-62 (102)
21 1uiz_A MIF, macrophage migrati 26.4 80 0.0027 27.4 5.1 44 51-96 54-102 (115)
22 1hfo_A Migration inhibitory fa 25.7 84 0.0029 27.1 5.1 51 42-96 46-101 (113)
23 4eyb_A Beta-lactamase NDM-1; m 24.7 1.2E+02 0.004 30.3 6.7 49 40-98 75-123 (270)
24 3isy_A Bsupi, intracellular pr 22.3 3.7E+02 0.013 24.1 8.7 80 615-702 15-106 (120)
25 1u9d_A Hypothetical protein VC 22.1 3.7E+02 0.013 24.2 8.6 79 67-151 31-112 (122)
26 3djh_A Macrophage migration in 21.6 1E+02 0.0034 26.9 4.7 49 42-94 46-99 (114)
27 2g1d_A 30S ribosomal protein S 21.5 57 0.002 28.5 3.0 37 63-101 27-63 (98)
28 2xzm_P RPS24E; ribosome, trans 21.1 1.1E+02 0.0037 28.8 4.9 43 57-101 23-65 (149)
29 2wkb_A Macrophage migration in 20.6 90 0.0031 27.6 4.3 44 51-96 54-102 (125)
30 3u5c_Y RP50, 40S ribosomal pro 20.5 89 0.003 28.9 4.2 41 59-101 27-67 (135)
31 3fwu_A Macrophage migration in 20.3 73 0.0025 28.9 3.6 44 51-96 75-123 (133)
No 1
>2zws_A Neutral ceramidase; prism fold and beta-sandwich fold, hydrolase, lipid metaboli secreted; HET: PLM; 1.40A {Pseudomonas aeruginosa} PDB: 2zxc_A*
Probab=100.00 E-value=8.6e-161 Score=1389.27 Aligned_cols=634 Identities=39% Similarity=0.674 Sum_probs=587.1
Q ss_pred CceEEEEEEEeccCCCCccccccccCCCCccceeecceEEEEEEEEeCCCCCEEEEEEeccccccHHHHHHHHHHHHHHh
Q 047902 1 GQYLVGVGSYDMTGPAAGTNMMGYANLFQNTAGIHFRLRARTFIVAESSNGTRFAFVNLDAGMASQLVTTKVLEKLKTRF 80 (720)
Q Consensus 1 ~~~~vG~a~~DITgP~~~v~m~GYa~~~~~a~Gihd~L~ARA~vl~~~~~~~rvv~Vs~Dl~~i~~~v~~~V~~~L~~~~ 80 (720)
+.|+||++++|||||+.++.||||+.+.|+++|||||||||||||+++++++|+|||++|++|+++.++++|+++|++++
T Consensus 3 ~~~~vG~g~~DITgP~~~v~m~GYa~~~q~a~Gihd~L~aRA~vl~d~~~~~rvv~Vs~D~~~~~~~v~~~V~~~L~~~~ 82 (646)
T 2zws_A 3 LPYRFGLGKADITGEAAEVGMMGYSSLEQKTAGIHMRQWARAFVIEEAASGRRLVYVNTDLGMIFQAVHLKVLARLKAKY 82 (646)
T ss_dssp CSEEEEEEEEECCCCCEEEEEESSCCTTCEEEEESSCCEEEEEEEEESSSCCEEEEEEESSSCCCHHHHHHHHHHHHHHS
T ss_pred CceEEEEEEEeCCCCCCCceecCccccCccccceecceEEEEEEEEcCCCCCEEEEEEECcccCCHHHHHHHHHHHHHHh
Confidence 46999999999999999999999999999999999999999999998634899999999999999999999999999999
Q ss_pred CCCCCCCcEEEEeeecCCCCCcCchhhhccccccccchHHHHHHHHHHHHHHHHHHhcCCcEEEEEEEEEecCccccCCh
Q 047902 81 GNLYTEENIAISGIHTHAGPGGYLQYLIYSITSLGFVQQSFDAIVSAIVQSIVQAHNNLKPGSIFIRKGDVENAGINRSP 160 (720)
Q Consensus 81 G~~i~~~nViisaTHTHSgP~g~~~~~~~~~~~~g~~~~y~~~lv~~iv~AI~~A~~~l~Pa~l~~g~g~~~~~~~NRs~ 160 (720)
|++|+.+||+||+|||||||++|+++.+|+++..||+++|+++|+++|++||++||++|+|++|.++++++.++++|||+
T Consensus 83 g~~~~~~nV~isaTHTHSgP~g~~~~~l~~~~~~g~~~~y~~~lv~~iv~AI~~A~~~l~pa~l~~g~g~~~~~~~NRs~ 162 (646)
T 2zws_A 83 PGVYDENNVMLAATHTHSGPGGFSHYAMYNLSVLGFQEKTFNAIVDGIVRSIERAQARLQPGRLFYGSGELRNASRNRSL 162 (646)
T ss_dssp TTTCCTTTEEEEECCBSBEECCCCSSHHHHGGGTBCCHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSEEESCH
T ss_pred CCCCChhHEEEEeeeeCCCCcccccccccccccccccHHHHHHHHHHHHHHHHHHHhcCCcEEEEEEEEEeCcceecCCh
Confidence 98899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCHhhhhcCCCCCCCeeEEEEEEECCCCceEEEEEeeeecccccCCCCccccCChHhHHHHHHHHHhcCCCCCCc
Q 047902 161 SAYLLNPAEERARYPENVDKEMTLLKFVDAASGKSIGAFNWYATHGTSMSRDNLLISGDNKGAAARFFEDWFSSKNESSS 240 (720)
Q Consensus 161 ~ay~~NP~~er~~~~~~vD~~~~vL~f~~~~dG~~ia~L~~yA~HpTsl~~~n~lIS~D~~G~a~~~lE~~~~~~~~~~~ 240 (720)
.+|++|| ||++|++++||+|++|+|++. +|+++|+|+|||||||+|+++|++||+||||+++++||+.+++
T Consensus 163 ~ay~~NP--er~~~~g~vD~~~~vL~f~~~-dg~~ig~l~~fA~HpTsl~~~N~liS~D~~G~a~~~lE~~~~~------ 233 (646)
T 2zws_A 163 LSHLKNP--DIAGYEDGIDPQMSVLSFVDA-NGELAGAISWFPVHSTSMTNANHLISPDNKGYASYHWEHDVSR------ 233 (646)
T ss_dssp HHHTTCS--CCTTCTTSCCCEEEEEEEEET-TCCEEEEEEECCCCBCSSCTTCCEEBCHHHHHHHHHHHHTTCC------
T ss_pred hhhhcCc--cccccCCCCCCceEEEEEEeC-CCCEEEEEEEEccCceecCCCCCeecCccHHHHHHHHHHHhCC------
Confidence 9999999 899999999999999999988 8999999999999999999999999999999999999997643
Q ss_pred chhcchhhhhhhhhhhccCCCccCcccccccccccCCCCceEEEEEcccccCCCcCCCCcccccCCCCCCCCCCCCCCCC
Q 047902 241 ITTNIGKLMEKSKTIKATGGQQCGKTTSQGFKVRKNDGSLFVGAFCQSNVGDVTPNVLGAFCIDSGKPCDFNHSSCHGDD 320 (720)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fVaaF~qg~~GDvsPn~~g~~~~d~g~~c~~~~s~c~~~~ 320 (720)
+++||++|+|||+||+|||+.
T Consensus 234 -------------------------------------~~~fva~F~qg~~GDvsP~~~---------------------- 254 (646)
T 2zws_A 234 -------------------------------------KSGFVAAFAQTNAGNLSPNLN---------------------- 254 (646)
T ss_dssp -------------------------------------STTCEEEEECSSCTTEEECCC----------------------
T ss_pred -------------------------------------CCCeEEEEeccCcccCCcccc----------------------
Confidence 367999999999999999965
Q ss_pred ccccccCCCCcchhhHHHHHHHHHHHHHHHHHhhccccccCCceeEEEEeeeeeeEeecCCCCCccccccccccCccccc
Q 047902 321 QLCIGRGPGYPDEILSTKIIGERQFQKAVDLFNSATDQLSGKIDYRHVYINFTNIEVVLDGTGNNTVKTCPAALGPGFAA 400 (720)
Q Consensus 321 ~~~~~~GP~~~d~~~~~~~iG~~~~~~A~~l~~~~~~~l~g~v~~~~~~vd~~~~~v~~p~~~~~~~~tc~~a~G~sfaa 400 (720)
.|+++||++ ++++++++||++|+++|++++++..+++.++|+++|++|||+++++.++..+.+.++||++|||++|+|
T Consensus 255 -~~~~~Gp~~-~~~e~~~~iG~~~~~~a~~~l~~~~~~l~g~v~~~~~~vdm~~~~v~~~~~~g~~~~tc~~a~g~s~aa 332 (646)
T 2zws_A 255 -LKPGSGPFD-NEFDNTREIGLRQFAKAYEIAGQAQEEVLGELDSRFRFVDFTRLPIRPEFTDGQPRQLCTAAIGTSLAA 332 (646)
T ss_dssp -CCTTCCTTS-CHHHHHHHHHHHHHHHHHHHHHHCCEEECSCEEEEEEEEECTTCEECGGGSSSSCEECCCCCEEC----
T ss_pred -ccccCCCCc-ccHHHHHHHHHHHHHHHHHHHhhccccccCCcceEEEEecCcceeeecccCCcccceechhhhchhhhc
Confidence 356789984 899999999999999999999887788999999999999999999987633336889999999999999
Q ss_pred cc-cCCCCccccccCcccchhhHHHhhhhhcCC-chhhhhhcCCccEEecCCCCCCCCcCCCceeeEEEEEECCEEEEec
Q 047902 401 GT-TDGPGVFGFQQGDTEINKLWKQLRDVLKKP-SQYQEECQKPKAVLLSSGEMFEPYAWAPAVLPIQILRLGKLIILSV 478 (720)
Q Consensus 401 Gt-~DG~g~~~f~qg~~~~~p~w~~~~~~~~~p-~~~~~~cq~pKpill~~G~~~~p~~~~p~~~~vqilriG~l~iv~v 478 (720)
|+ +||||.|+|+|+ + ||+|+.+++++.+| ++++.+||+||||||++|+ +.||+|.|.+++||+||||+|+|+++
T Consensus 333 g~~~dgpg~~~f~q~-~--~~~w~~~~~~l~~~~~~~~~~cq~~k~ill~~g~-~~p~~~~~~~v~vqilriGdl~iv~~ 408 (646)
T 2zws_A 333 GSTEDGPGPLGLEEG-N--NPFLSALGGLLTGVPPQELVQCQAEKTILADTGN-KKPYPWTPTVLPIQMFRIGQLELLGA 408 (646)
T ss_dssp -----------CCSS-C--CHHHHHTTCSCCCCCCHHHHHHTTTCCEEECCTT-CSSSCSSCSEEEEEEEEETTEEEEEC
T ss_pred CCcccCCCccccccc-c--chhhhhhhhhhccccchhHHhhccCcceecccCC-CCCcccccceEEEEEEEECCEEEEec
Confidence 99 999999999999 4 99999999999988 7999999999999999999 89999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHhhhCCCCCCCCCceEEEEeecccccCCCCChhhhccceeeceecccCCCcHHHHHHHHHHH
Q 047902 479 PGEFTTMAGRRLREAVKDTLINNGNGEFDNDTHIVIAGLTNAYSQYIATFEEYAHQRYEAASTLYGPHTLPAYIQEFKKL 558 (720)
Q Consensus 479 PgE~tt~~G~rlr~~v~~~~~~~~~~~~~~~~~vvv~G~aNgy~gYitT~EeY~~q~YEg~sT~~Gp~tl~a~~~~~~~L 558 (720)
|||+|+|+|+|||+++++++.+. +...|+|+||+|+|+|||||+|||+.|+||+++|+|||||+++|+|++.+|
T Consensus 409 PgE~tt~~G~rlr~~~~~~~~~~------~~~~v~v~GyaN~y~gYi~T~EeY~~q~YEg~sT~~gp~tl~~~i~~~~~L 482 (646)
T 2zws_A 409 PAEFTVMAGVRIRRAVQAASEAA------GIRHVVFNGYANAYASYVTTREEYAAQEYEGGSTLYGPWTQAAYQQLFVDM 482 (646)
T ss_dssp SSEECHHHHHHHHHHHHHHHGGG------TCCEEEEECSBSSCCCEECCHHHHHHCCTTTTSCTTCTTHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHhhhccC------CCceEEEEecCCCCCCccCCHHHHhcCCccceeeecCCChHHHHHHHHHHH
Confidence 99999999999999999988653 357999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCCCCCcccccccccCCCCCCCCCCCccccceeecccCCCCCccCCCCceEEEEEcccCCCCCCCCCC
Q 047902 559 AQAMAKGEKTTKGPSPPDLSSVQLSLSLNPTGDSPPAGKMFGDIKEDINQPKDGSFNKGDRPSATFWSANPRYDLLTEGT 638 (720)
Q Consensus 559 ~~~l~~~~~~~~gp~p~~~~~~~~~~~~~v~~d~~p~g~~fGdv~~~~~~~~~~~y~~g~~v~~~F~~a~Prn~l~~~~t 638 (720)
+++|..++++++||+|||++.++++|+|+|++|.+|+|++||||+.|| . .+|++|++|+|+|++||||||||+++|
T Consensus 483 ~~~l~~~~~~~~g~~p~~~~~~~~~~~~~v~~d~~p~~~~fg~v~~~~---~-~~y~~g~~v~~~f~~~~p~n~~~~~~t 558 (646)
T 2zws_A 483 AVALRERLPVETSAIAPDLSCCQMNFQTGVVADDPYIGKSFGDVLQQP---R-ESYRIGDKVTVAFVTGHPKNDLRTEKT 558 (646)
T ss_dssp HHHHHHCCCCCCCCCCCCCGGGCCBCCCCCCCCCCCTTCCTTCEEECC---C-SEEETTCEEEEEEECCCGGGCCCTTSC
T ss_pred HHHHhcCCCCCCCCCCccccccccccCCCCccCCCCCCCCCCcEeecC---c-ccccCCCEEEEEEEccCCCcccccCCc
Confidence 999999999999999999999999999999999999999999999998 3 589999999999999999999999999
Q ss_pred eEEEEE-ecCCceE--EEeeCCCcceEEEEEecCCCeeeEEEEEEEcCCCCCCcceEEEEeccccc-cCCCCceeeEEec
Q 047902 639 YAVVEM-LQGKRWI--PVYDDDDFSLYFKWSLENTSFHGLATIEWEVPTKAIPGVYRLRHFGSSKK-AVNSTNHYFTGAS 714 (720)
Q Consensus 639 ~~~Ve~-~~~~~W~--~v~~D~d~~t~~~w~~~~~~~~s~~~i~W~ip~~~~~G~YRi~~~G~~k~-~~~g~~~~~~g~s 714 (720)
|++||| .+++.|+ +|+||+||+|+|+|++.. .+.|++||+|+||.+++||+|||+|||+||+ +. |+|+||+|+|
T Consensus 559 ~~~ve~~~~~~~w~~~~v~~D~d~~t~~~w~r~~-~~~s~~~~~W~i~~~~~~g~yRi~~~g~~k~~~~-g~~~~~~g~s 636 (646)
T 2zws_A 559 FLEVVNIGKDGKQTPVTVATDNDWDTQYRWERVG-ISASKATISWSIPPGTEPGHYYIRHYGNAKNFWT-QKISEIGGST 636 (646)
T ss_dssp SEEEEEEESSSCCCCEEEEETTSTTEEEEEEEET-TTEEEEEEEEECCTTCCSEEEEEEEEEEEECTTT-CCEEEEEEEC
T ss_pred eEEEEEecCCCceEEEEEecCCCccEEEEEEeCC-CCceEEEEEEECCCCCCCcceEEEEEcccccccC-CCceeeEEec
Confidence 999999 5555999 999999999999999443 3899999999999999999999999999999 88 9999999999
Q ss_pred ceeEEC
Q 047902 715 SAFTVS 720 (720)
Q Consensus 715 ~~F~v~ 720 (720)
++|+|.
T Consensus 637 ~~f~v~ 642 (646)
T 2zws_A 637 RSFEVL 642 (646)
T ss_dssp CCEEEE
T ss_pred ccEEEe
Confidence 999984
No 2
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=94.51 E-value=0.28 Score=42.76 Aligned_cols=74 Identities=12% Similarity=0.222 Sum_probs=48.6
Q ss_pred CccCCCCceEEEEEcccCCCCCCCCCCeEEEEEecCCceEEEeeCCCcceEEEEE-ecCCCeeeEEEEEEEcCCCCCCcc
Q 047902 612 GSFNKGDRPSATFWSANPRYDLLTEGTYAVVEMLQGKRWIPVYDDDDFSLYFKWS-LENTSFHGLATIEWEVPTKAIPGV 690 (720)
Q Consensus 612 ~~y~~g~~v~~~F~~a~Prn~l~~~~t~~~Ve~~~~~~W~~v~~D~d~~t~~~w~-~~~~~~~s~~~i~W~ip~~~~~G~ 690 (720)
..|+|||+|.+.+..-+.... ......+.|+-. |.+-....+|. ... ....+..+|.+|.+++.|.
T Consensus 11 ~iYrPGetV~~~~~~~~~~~~-p~~~~~~~v~l~----------dp~g~~v~~~~~~~~--~~G~~~~~f~Lp~~~~~G~ 77 (102)
T 2p9r_A 11 SIYKPGQTVKFRVVSMDENFH-PLNELIPLVYIQ----------DPKGNRIAQWQSFQL--EGGLKQFSFPLSSEPFQGS 77 (102)
T ss_dssp SEECTTCEEEEEEEEECGGGC-BCCCEEEEEEEE----------CTTSCEEEEEEEEEC--BTTEEEEEEECCSSCCCEE
T ss_pred cccCCCCEEEEEEEEECCCCc-CCCCCceEEEEE----------CCCCCEEEEEEeecC--CCCEEEEEEECCCCCCCee
Confidence 489999999988776554322 123344455432 44445566675 221 2345678999999999999
Q ss_pred eEEEEecc
Q 047902 691 YRLRHFGS 698 (720)
Q Consensus 691 YRi~~~G~ 698 (720)
|+|+-+-.
T Consensus 78 y~i~~~~~ 85 (102)
T 2p9r_A 78 YKVVVQKK 85 (102)
T ss_dssp EEEEEECT
T ss_pred EEEEEEEC
Confidence 99998753
No 3
>4fxk_A Complement C4 beta chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_A*
Probab=84.23 E-value=4.2 Score=46.44 Aligned_cols=81 Identities=14% Similarity=0.171 Sum_probs=51.1
Q ss_pred cceeecccCCCCCccCCCCceEEEEEcccCCCCCCCCCCeEEEEEecCCceEEEeeCCCcceEEEEE-ecCCCeeeEEEE
Q 047902 600 GDIKEDINQPKDGSFNKGDRPSATFWSANPRYDLLTEGTYAVVEMLQGKRWIPVYDDDDFSLYFKWS-LENTSFHGLATI 678 (720)
Q Consensus 600 Gdv~~~~~~~~~~~y~~g~~v~~~F~~a~Prn~l~~~~t~~~Ve~~~~~~W~~v~~D~d~~t~~~w~-~~~~~~~s~~~i 678 (720)
|-|..|-|+ ..|+|||+|.++.+.-++. ++....-+.|+- .|.+-....+|. .. ....+..
T Consensus 120 ~~vFIqTDr---~iYrPGqtV~~r~i~~d~~--~~p~~~~~~v~i----------~dp~g~~v~~~~~~~---~~G~~~~ 181 (656)
T 4fxk_A 120 GHLFLQTDQ---PIYNPGQRVRYRVFALDQK--MRPSTDTITVMV----------ENSHGLRVRKKEVYM---PSSIFQD 181 (656)
T ss_dssp SEEEEEESC---SEECTTCEEEEEEEEECSS--SSBCCCCEEEEE----------ECTTCCEEEEEEECC---TTSEEEE
T ss_pred ccEEEECCC---CCcCCCCEEEEEEEEECCc--cCcCcccceEEE----------ECCCCcEEeeeEEec---CCceEEE
Confidence 567767653 3899999999877765543 332222223432 233333334555 22 1346788
Q ss_pred EEEcCCCCCCcceEEEEecc
Q 047902 679 EWEVPTKAIPGVYRLRHFGS 698 (720)
Q Consensus 679 ~W~ip~~~~~G~YRi~~~G~ 698 (720)
+|.+|.+.+.|.|+|+..-.
T Consensus 182 ~f~Lp~~~~~G~w~i~v~~~ 201 (656)
T 4fxk_A 182 DFVIPDISEPGTWKISARFS 201 (656)
T ss_dssp EEECCTTCCSEEEEEEEEES
T ss_pred EecCCCCCCCcCEEEEEEEc
Confidence 99999999999999998643
No 4
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=77.69 E-value=7.4 Score=48.71 Aligned_cols=84 Identities=13% Similarity=0.166 Sum_probs=53.8
Q ss_pred cceeecccCCCCCccCCCCceEEEEEcccCCCCCCCCCCeEEEEEecCCceEEEeeCCCcceEEEEE-ecCCCeeeEEEE
Q 047902 600 GDIKEDINQPKDGSFNKGDRPSATFWSANPRYDLLTEGTYAVVEMLQGKRWIPVYDDDDFSLYFKWS-LENTSFHGLATI 678 (720)
Q Consensus 600 Gdv~~~~~~~~~~~y~~g~~v~~~F~~a~Prn~l~~~~t~~~Ve~~~~~~W~~v~~D~d~~t~~~w~-~~~~~~~s~~~i 678 (720)
+.+..+.|+ ..|+|||||.++-+.=++....-.....+.|+-. |.+-....+|. ... ....+..
T Consensus 100 ~~~fi~TDr---~iYrPGqtV~~r~~~~~~~~~p~~~~~~v~v~l~----------dp~g~~i~~~~~~~~--~~G~~~~ 164 (1325)
T 2pn5_A 100 ISGLIQVDK---PVFKPGDTVNFRVIVLDTELKPPARVKSVYVTIR----------DPQRNVIRKWSTAKL--YAGVFES 164 (1325)
T ss_dssp EEEEEEESC---SEECTTCEEEEEEEEEETTSSCCSSCCEEEEEEE----------CTTCCEEEEEEEEEC--BTTEEEE
T ss_pred ccEEEecCC---CccCCCCEEEEEEEEecCCccccccCccEEEEEE----------CCCCCEEEEEecccC--CCCeEec
Confidence 466677652 4899999999776665554321122223444432 44444556777 221 2345778
Q ss_pred EEEcCCCCCCcceEEEEecc
Q 047902 679 EWEVPTKAIPGVYRLRHFGS 698 (720)
Q Consensus 679 ~W~ip~~~~~G~YRi~~~G~ 698 (720)
+|.+|.+...|.|+|+-+..
T Consensus 165 ~f~Lp~~~~~G~y~I~~~~~ 184 (1325)
T 2pn5_A 165 DLQIAPTPMLGVWNISVEVE 184 (1325)
T ss_dssp EEECCSSCCCEEEEEEEEET
T ss_pred ceECCCCccccceEEEEEeC
Confidence 99999999999999998754
No 5
>3hrz_A Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_A* 3hs0_A*
Probab=76.67 E-value=3.2 Score=47.95 Aligned_cols=77 Identities=12% Similarity=0.124 Sum_probs=46.2
Q ss_pred cceeecccCCCCCccCCCCceEEEEEcccCCCCCCCCCCeEEEEEecCCceEEEeeCCCcceEEEEE-ecCCCeeeEEEE
Q 047902 600 GDIKEDINQPKDGSFNKGDRPSATFWSANPRYDLLTEGTYAVVEMLQGKRWIPVYDDDDFSLYFKWS-LENTSFHGLATI 678 (720)
Q Consensus 600 Gdv~~~~~~~~~~~y~~g~~v~~~F~~a~Prn~l~~~~t~~~Ve~~~~~~W~~v~~D~d~~t~~~w~-~~~~~~~s~~~i 678 (720)
|-+..+.|+ ..|+|||+|.++++.-++..... +.. +.|+- .|.+-. ++.|. ... . +..
T Consensus 104 ~~~fi~TDr---~iYrPGqtV~~r~i~~d~~~~p~-~~~-~~v~i----------~dP~g~-~i~~~~~~~--~---~~~ 162 (627)
T 3hrz_A 104 SFLFIQTDK---GIYTPGSPVLYRVFSMDHNTSKM-NKT-VIVEF----------QTPEGI-LVSSNSVDL--N---FFW 162 (627)
T ss_dssp SCEEEEESC---SEECTTCEECEEEEESCC--------C-EEEEE----------ECTTCC-EEEEEEEBT--T---BCC
T ss_pred CcEEEECCC---CccCCCCEEEEEEEEECCCCccc-Ccc-EEEEE----------ECCCCC-EEEEEEecc--c---eEE
Confidence 566667653 48999999999988876533221 222 23332 233333 22343 211 1 667
Q ss_pred EEEcCCCCCCcceEEEEec
Q 047902 679 EWEVPTKAIPGVYRLRHFG 697 (720)
Q Consensus 679 ~W~ip~~~~~G~YRi~~~G 697 (720)
+|.+|.+.+.|.|+|+-.-
T Consensus 163 ~f~Lp~~~~~G~w~i~v~~ 181 (627)
T 3hrz_A 163 PYNLPDLVSLGTWRIVAKY 181 (627)
T ss_dssp CEECCSSCCCEEEEEEEEE
T ss_pred EEECCCCCCCeeEEEEEEE
Confidence 8999999999999999864
No 6
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=70.95 E-value=18 Score=45.87 Aligned_cols=85 Identities=11% Similarity=0.161 Sum_probs=57.0
Q ss_pred cccceeecccCCCCCccCCCCceEEEEEcccCCCCCCCCCCeEEEEEecCCceEEEeeCCCcceEEEEE-ecCCCeeeEE
Q 047902 598 MFGDIKEDINQPKDGSFNKGDRPSATFWSANPRYDLLTEGTYAVVEMLQGKRWIPVYDDDDFSLYFKWS-LENTSFHGLA 676 (720)
Q Consensus 598 ~fGdv~~~~~~~~~~~y~~g~~v~~~F~~a~Prn~l~~~~t~~~Ve~~~~~~W~~v~~D~d~~t~~~w~-~~~~~~~s~~ 676 (720)
+-|-+..|-| +..|+|||+|.++-+.=++.... ...++..|+-. |.+.....+|. .. .....+
T Consensus 102 ~~~~~fiqTD---K~iY~Pgq~V~~rv~~~~~~~~p-~~~~~~~v~i~----------dp~g~~i~~~~~~~--~~~G~~ 165 (1451)
T 4acq_A 102 EDSLVFVQTD---KSIYKPGQTVKFRVVSMDENFHP-LNELIPLVYIQ----------DPKGNRIAQWQSFQ--LEGGLK 165 (1451)
T ss_dssp CCCEEEEEES---CSEECTTCEEEEEEEEECTTCCB-CCCEEEEEEEE----------CTTSCEEEEEEEEE--CBTTEE
T ss_pred cCccEEEECC---CCcCCCCCEEEEEEEEECCCCcC-ccCceeEEEEE----------CCCCCEEEEeeecc--CCCCeE
Confidence 3467777775 24899999999777666653322 23455444432 55566666787 22 124467
Q ss_pred EEEEEcCCCCCCcceEEEEecc
Q 047902 677 TIEWEVPTKAIPGVYRLRHFGS 698 (720)
Q Consensus 677 ~i~W~ip~~~~~G~YRi~~~G~ 698 (720)
..+|.+|.....|+|+|+-...
T Consensus 166 ~~~f~L~~~~~~G~w~I~~~~~ 187 (1451)
T 4acq_A 166 QFSFPLSSEPFQGSYKVVVQKK 187 (1451)
T ss_dssp EEEEECCSSCCCEEEEEEEECT
T ss_pred EEEeECCCCCCceeEEEEEEec
Confidence 7899999999999999998653
No 7
>2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A*
Probab=61.95 E-value=31 Score=39.46 Aligned_cols=82 Identities=16% Similarity=0.285 Sum_probs=50.3
Q ss_pred cceeecccCCCCCccCCCCceEEEEEcccCCCCCCCCCCeEEEEEecCCceEEEeeCCCcceEEEEE-ecCCCeeeEEEE
Q 047902 600 GDIKEDINQPKDGSFNKGDRPSATFWSANPRYDLLTEGTYAVVEMLQGKRWIPVYDDDDFSLYFKWS-LENTSFHGLATI 678 (720)
Q Consensus 600 Gdv~~~~~~~~~~~y~~g~~v~~~F~~a~Prn~l~~~~t~~~Ve~~~~~~W~~v~~D~d~~t~~~w~-~~~~~~~s~~~i 678 (720)
|-+..+-|+ ..|+|||+|.++++.-+++ ++.-...+.|+-. |.+-....++. ... .....+..
T Consensus 106 ~~~fi~TDR---~iYrPGqtV~~r~i~~d~~--~~p~~~~v~v~l~----------dP~g~~i~~~~~~~~-~~~G~~~~ 169 (645)
T 2hr0_A 106 GYLFIQTDK---TIYTPGSTVLYRIFTVNHK--LLPVGRTVMVNIE----------NPEGIPVKQDSLSSQ-NQLGVLPL 169 (645)
T ss_dssp CEEEEEESC---SBCCTTSEEEEEEEEECTT--SCBCCCEEEEEEE----------CTTSCEEEEEEEECT-TTTTEEEE
T ss_pred ccEEEEcCC---ccCCCCCEEEEEEEEECCC--CcccCceEEEEEE----------CCCCCEEEEEEeecc-ccCCeEEE
Confidence 456666642 4899999999888876643 3322223455533 33332233333 110 02335678
Q ss_pred EEEcCCCCCCcceEEEEec
Q 047902 679 EWEVPTKAIPGVYRLRHFG 697 (720)
Q Consensus 679 ~W~ip~~~~~G~YRi~~~G 697 (720)
+|.+|.+.+.|.|+|+-+-
T Consensus 170 ~f~Lp~~~~~G~w~I~v~~ 188 (645)
T 2hr0_A 170 SWDIPELVNMGQWKIRAYY 188 (645)
T ss_dssp EEECCSSCCCSEEEEEEEE
T ss_pred EEECCCccccccEEEEEEE
Confidence 9999999999999999864
No 8
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=57.81 E-value=28 Score=44.71 Aligned_cols=80 Identities=13% Similarity=0.122 Sum_probs=51.1
Q ss_pred ccceeecccCCCCCccCCCCceEEEEEcccCCCCCCCCCCeEEEEEecCCceEEEeeCCCcceEEEEEecCCCeeeEEEE
Q 047902 599 FGDIKEDINQPKDGSFNKGDRPSATFWSANPRYDLLTEGTYAVVEMLQGKRWIPVYDDDDFSLYFKWSLENTSFHGLATI 678 (720)
Q Consensus 599 fGdv~~~~~~~~~~~y~~g~~v~~~F~~a~Prn~l~~~~t~~~Ve~~~~~~W~~v~~D~d~~t~~~w~~~~~~~~s~~~i 678 (720)
-|-+..|.|+ ..|+|||+|.++-..-++....- +.+ +.| ...|.+-....+|.... . +..
T Consensus 125 ~~~~FiqTDk---~iYrPGqtV~~rvi~~~~~~~p~-~~~-~~v----------~i~dP~g~~i~~~~~~~---~--~~~ 184 (1642)
T 3prx_B 125 SSFLFIQTDK---GIYTPGSPVLYRVFSMDHNTSKM-NKT-VIV----------EFQTPEGILVSSNSVDL---N--FFW 184 (1642)
T ss_dssp CCCEEEEESC---SEECTTCEEEEEEEECCC------CCC-EEE----------EEECSSCCEEEEEEECT---T--CCC
T ss_pred CCeEEEEcCC---CcCCCCCEEEEEEEEEcCCCccc-Cce-EEE----------EEECCCCCEEEEEEecc---c--ceE
Confidence 3677777753 48999999998777755432211 122 233 22355555666676221 1 677
Q ss_pred EEEcCCCCCCcceEEEEecc
Q 047902 679 EWEVPTKAIPGVYRLRHFGS 698 (720)
Q Consensus 679 ~W~ip~~~~~G~YRi~~~G~ 698 (720)
+|.+|...+.|+|+|+-..+
T Consensus 185 ~f~L~~~~~~G~w~I~v~~~ 204 (1642)
T 3prx_B 185 PYNLPDLVSLGTWRIVAKYE 204 (1642)
T ss_dssp EEECCSSCCCEEEEEEEEET
T ss_pred EEEcCCCCCceeEEEEEEeC
Confidence 99999999999999998644
No 9
>2c9r_A COPC, copper resistance protein C; copper transport, copper proteins, copper dissociation const metal-binding, electron transport; 2.0A {Pseudomonas syringae PV} PDB: 1m42_A 1nm4_A 1ot4_A 2c9p_A 2c9q_A
Probab=48.13 E-value=1.2e+02 Score=26.30 Aligned_cols=59 Identities=15% Similarity=0.083 Sum_probs=27.3
Q ss_pred CceEEEEEcccCCCCCCCCCCeEEEEEecCCceEE--------EeeCCCcceEEEEEecCCCeeeEEEEEEEc
Q 047902 618 DRPSATFWSANPRYDLLTEGTYAVVEMLQGKRWIP--------VYDDDDFSLYFKWSLENTSFHGLATIEWEV 682 (720)
Q Consensus 618 ~~v~~~F~~a~Prn~l~~~~t~~~Ve~~~~~~W~~--------v~~D~d~~t~~~w~~~~~~~~s~~~i~W~i 682 (720)
+.|+.+|=. .+....+-+.|-..+|..|.. ...|.+..+.+..... .+....++|.|++
T Consensus 19 ~~v~L~Fse-----~v~~~~s~v~v~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~-~L~~G~YtV~Wrv 85 (102)
T 2c9r_A 19 AKIELHFSE-----NLVTQFSGAKLVMTAMPGMEHSPMAVKAAVSGGGDPKTMVITPAS-PLTAGTYKVDWRA 85 (102)
T ss_dssp SCEEEEESS-----CCCGGGCEEEEEEEECC-----CEEECEEEEECSSTTEEEEEESS-CCCSEEEEEEEEE
T ss_pred CEEEEEeCC-----CCccCccEEEEECCCCCeeeeccccccccceecCCCCcEEEEECC-CCCCceEEEEEEE
Confidence 568889932 122233556666666666654 3344444444444411 1334445555553
No 10
>1lyq_A PCOC copper resistance protein; beta barrel, IG domain, metal binding protein; 1.50A {Escherichia coli} SCOP: b.1.18.17 PDB: 1ix2_A
Probab=44.45 E-value=1.1e+02 Score=26.71 Aligned_cols=30 Identities=17% Similarity=0.061 Sum_probs=14.9
Q ss_pred CceEEEEEcccCCCCCCCCCCeEEEEEecCCceEE
Q 047902 618 DRPSATFWSANPRYDLLTEGTYAVVEMLQGKRWIP 652 (720)
Q Consensus 618 ~~v~~~F~~a~Prn~l~~~~t~~~Ve~~~~~~W~~ 652 (720)
+.|+.+|=. .+....+-+.|-..+|..|..
T Consensus 20 ~~V~L~Fse-----~v~~~~s~v~v~~~~g~~v~~ 49 (104)
T 1lyq_A 20 EKIQLNFSE-----NLTVKFSGAKLTMTGMKGMSS 49 (104)
T ss_dssp CCEEEEESS-----CCCGGGCEEEEEEEEEC---C
T ss_pred CEEEEEeCC-----CCcccccEEEEECCCCCeeee
Confidence 568889922 223333556666555556643
No 11
>1vra_A Arginine biosynthesis bifunctional protein ARGJ; 10175521, S genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.00A {Bacillus halodurans}
Probab=41.74 E-value=37 Score=33.65 Aligned_cols=46 Identities=13% Similarity=0.101 Sum_probs=35.9
Q ss_pred EEEEEEEEeCCCCCEEEEEEeccccccH--HHHHHHHHHHHHHhCCCCCCCcEEEEeee
Q 047902 39 RARTFIVAESSNGTRFAFVNLDAGMASQ--LVTTKVLEKLKTRFGNLYTEENIAISGIH 95 (720)
Q Consensus 39 ~ARA~vl~~~~~~~rvv~Vs~Dl~~i~~--~v~~~V~~~L~~~~G~~i~~~nViisaTH 95 (720)
.+||+|+.++ ..-.|-..+ .-..++.+.+++.+| +++++|++++|=
T Consensus 89 ~~rAvvvNSG---------nANA~TG~~G~~da~~~a~~~A~~lg--i~~~~VlvaSTG 136 (208)
T 1vra_A 89 KLQAMIVNSG---------IANACTGKRGLDDAYTMRAVGAETFH--IPEHYVAVTSTG 136 (208)
T ss_dssp EEEEEEEEEE---------ECCCSCHHHHHHHHHHHHHHHHHHHT--SCGGGEEEEEEE
T ss_pred ceEEEEEccC---------CccccccHHHHHHHHHHHHHHHHHhC--CChhHEEEeCCc
Confidence 5788888776 555666644 445588899999999 999999999994
No 12
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=35.73 E-value=42 Score=43.13 Aligned_cols=82 Identities=12% Similarity=0.144 Sum_probs=50.2
Q ss_pred ccceeecccCCCCCccCCCCceEEEEEcccCCCCCCCCCCeEEEEEecCCceEEEeeCCCcceEEEEEecCCCeeeEEE-
Q 047902 599 FGDIKEDINQPKDGSFNKGDRPSATFWSANPRYDLLTEGTYAVVEMLQGKRWIPVYDDDDFSLYFKWSLENTSFHGLAT- 677 (720)
Q Consensus 599 fGdv~~~~~~~~~~~y~~g~~v~~~F~~a~Prn~l~~~~t~~~Ve~~~~~~W~~v~~D~d~~t~~~w~~~~~~~~s~~~- 677 (720)
-+.+..+-|+ ..|+|||||.+++..-+.. ++.-..-+.|+-. |.+-....+|.... ....+.
T Consensus 123 ~~~~fiqTDR---~iYrPGqtV~~r~i~~d~~--~~p~~~~v~v~l~----------dP~G~~i~~~~~~~--~~G~~~~ 185 (1676)
T 3cu7_A 123 NGFLFIHTDK---PVYTPDQSVKVRVYSLNDD--LKPAKRETVLTFI----------DPEGSEVDMVEEID--HIGIISF 185 (1676)
T ss_dssp CSEEEEEESC---SEECTTCEECEEEEEECTT--CSCCCCCEEEEEE----------ETTTEECCCEEECC--SSSEEEC
T ss_pred CCcEEEECCC---CccCCCCEEEEEEEEECCC--CcccccceEEEEE----------CCCCCEEEEEeeec--CCCceec
Confidence 3567777652 4899999999887765543 2221112334322 33333344454111 234567
Q ss_pred EEEEcCCCCCCcceEEEEec
Q 047902 678 IEWEVPTKAIPGVYRLRHFG 697 (720)
Q Consensus 678 i~W~ip~~~~~G~YRi~~~G 697 (720)
.++.+|.+.+.|.|+|+-.-
T Consensus 186 ~~f~Lp~~~~~G~w~I~v~~ 205 (1676)
T 3cu7_A 186 PDFKIPSNPRYGMWTIKAKY 205 (1676)
T ss_dssp CCEECCSSCCCEEEEEEEEB
T ss_pred ceeeCCCCccccceEEEEEe
Confidence 79999999999999999864
No 13
>2vtc_A CEL61B, cellulase; hydrolase, glycoside; HET: NAG; 1.6A {Hypocrea jecorina}
Probab=34.66 E-value=5 Score=41.00 Aligned_cols=87 Identities=16% Similarity=0.198 Sum_probs=44.4
Q ss_pred ccCCCCceEEEEEcc-cCCCCCCCCCCeEE-----EEEecC--CceEEEeeCCCcceEEEEEecCCCeeeEEEEEEEcCC
Q 047902 613 SFNKGDRPSATFWSA-NPRYDLLTEGTYAV-----VEMLQG--KRWIPVYDDDDFSLYFKWSLENTSFHGLATIEWEVPT 684 (720)
Q Consensus 613 ~y~~g~~v~~~F~~a-~Prn~l~~~~t~~~-----Ve~~~~--~~W~~v~~D~d~~t~~~w~~~~~~~~s~~~i~W~ip~ 684 (720)
.+++|++|++++.+. -|.. .=.--.||. ++..++ ..|-.|..++--...-.|-...+ ....-+.+.+||.
T Consensus 90 ~v~AG~~v~~~~~~~~~~~~-~GP~~~Ylak~~~~~~~~d~~g~~WFKI~e~G~~~~~g~W~~~~l-i~~~~~~~~tIP~ 167 (249)
T 2vtc_A 90 TAAAGSNIVFQWGPGVWPHP-YGPIVTYVVECSGSCTTVNKNNLRWVKIQEAGINYNTQVWAQQDL-INQGNKWTVKIPS 167 (249)
T ss_dssp EEETTCEEEEEEESSCCCCC-SSCEEEEEEECSSCGGGCCGGGCEEEEEEEECEETTTTEEHHHHH-HHTTSEEEEECCT
T ss_pred EECCCCEEEEEEeccccccC-CCcHHHhhhcCCccccccCCCCCCEEEEEeecCCCCCCcccchhh-hccCCeeEEEcCC
Confidence 467899999988652 2322 101113331 011121 14766664421111123541101 0111245778999
Q ss_pred CCCCcceEEEEeccccc
Q 047902 685 KAIPGVYRLRHFGSSKK 701 (720)
Q Consensus 685 ~~~~G~YRi~~~G~~k~ 701 (720)
+.+||.|-|||.=-+.+
T Consensus 168 ~l~~G~YLlR~E~iALH 184 (249)
T 2vtc_A 168 SLRPGNYVFRHELLAAH 184 (249)
T ss_dssp TBCSEEEEEEEEEEECT
T ss_pred CCCCcceEEEEEeeecc
Confidence 99999999999755443
No 14
>2v4i_A Glutamate N-acetyltransferase 2 alpha chain; cytoplasm, acyl enzyme, NTN hydrolase, acyltransferase, ornithine acetyl transferase; 2.2A {Streptomyces clavuligerus} PDB: 2vzk_A* 2w4n_A* 2yep_A*
Probab=34.61 E-value=35 Score=32.91 Aligned_cols=46 Identities=20% Similarity=0.265 Sum_probs=35.6
Q ss_pred EEEEEEEEeCCCCCEEEEEEeccccccH--HHHHHHHHHHHHHhCCCCCCCcEEEEeee
Q 047902 39 RARTFIVAESSNGTRFAFVNLDAGMASQ--LVTTKVLEKLKTRFGNLYTEENIAISGIH 95 (720)
Q Consensus 39 ~ARA~vl~~~~~~~rvv~Vs~Dl~~i~~--~v~~~V~~~L~~~~G~~i~~~nViisaTH 95 (720)
.+||+|+.++ ..-.|-..+ .-..++.+.+++.+| +++++|++++|=
T Consensus 58 ~~rAvvvNSG---------nANA~TG~~G~~da~~~~~~~A~~lg--~~~~~Vlv~STG 105 (173)
T 2v4i_A 58 QARGVVVLAR---------NANVATGLEGEENAREVREAVARALG--LPEGEMLIASTG 105 (173)
T ss_dssp BCCEEEEEES---------CCCCSCHHHHHHHHHHHHHHHHHHTT--CCGGGEEEEEES
T ss_pred ceEEEEEcCC---------CccccccHHHHHHHHHHHHHHHHHhC--CCchhEEEecCc
Confidence 4688888887 345555544 445588899999999 999999999994
No 15
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=32.41 E-value=89 Score=40.05 Aligned_cols=82 Identities=16% Similarity=0.294 Sum_probs=48.8
Q ss_pred cceeecccCCCCCccCCCCceEEEEEcccCCCCCCCCCCeEEEEEecCCceEEEeeCCCcceEEEEE-ecCCCeeeEEEE
Q 047902 600 GDIKEDINQPKDGSFNKGDRPSATFWSANPRYDLLTEGTYAVVEMLQGKRWIPVYDDDDFSLYFKWS-LENTSFHGLATI 678 (720)
Q Consensus 600 Gdv~~~~~~~~~~~y~~g~~v~~~F~~a~Prn~l~~~~t~~~Ve~~~~~~W~~v~~D~d~~t~~~w~-~~~~~~~s~~~i 678 (720)
|.+..+-|+ ..|+|||||.+++..-+.+ ++....-+.|+-.+ .+-....++. ... .....+..
T Consensus 127 ~~~fiqTDR---~iYrPGqtV~~r~i~~d~~--~~p~~~~v~v~l~d----------P~g~~i~~~~~~~t-~~~G~~~~ 190 (1661)
T 2b39_A 127 GYLFIQTDK---TIYTPGSTVLYRVFTVDHK--LLPVGQTVFITIET----------PDGIPVKRDSKSSQ-NQFGILTL 190 (1661)
T ss_dssp CEEEEEESC---SEECTTSEEEEEEEEECTT--SCCCCCCEEEEEEE----------TTEEEEEEEEECTT-TTTSCCEE
T ss_pred CcEEEecCC---CccCCCCEEEEEEEEECCC--CcccCceEEEEEEC----------CCCCEEeeeeeccc-ccCCeEee
Confidence 456666642 4899999999888776643 33222234554332 2222222222 110 01234567
Q ss_pred EEEcCCCCCCcceEEEEec
Q 047902 679 EWEVPTKAIPGVYRLRHFG 697 (720)
Q Consensus 679 ~W~ip~~~~~G~YRi~~~G 697 (720)
+|.+|.+.+.|.|+|+-+-
T Consensus 191 ~f~Lp~~~~~G~w~I~v~~ 209 (1661)
T 2b39_A 191 SWNIPELVNMGVWKIKAYY 209 (1661)
T ss_dssp EEECCSSCCCEEEEEEEEE
T ss_pred eeeCCCCccccceEEEEEe
Confidence 9999999999999999863
No 16
>2v94_A RPS24, 30S ribosomal protein S24E; ribonucleoprotein; 1.90A {Pyrococcus abyssi} SCOP: d.12.1.3
Probab=31.90 E-value=56 Score=29.02 Aligned_cols=45 Identities=16% Similarity=0.093 Sum_probs=35.4
Q ss_pred EEEEeccccccHHHHHHHHHHHHHHhCCCCCCCcEEEEeeecCCCCC
Q 047902 55 AFVNLDAGMASQLVTTKVLEKLKTRFGNLYTEENIAISGIHTHAGPG 101 (720)
Q Consensus 55 v~Vs~Dl~~i~~~v~~~V~~~L~~~~G~~i~~~nViisaTHTHSgP~ 101 (720)
+.+.+-..+-...-+.+|+++|++.++ .+++.|+|-.-.||-|-+
T Consensus 27 ~~~~v~Hpg~~tpsk~eirekLA~~~~--~~~d~Vvv~~~~T~fG~g 71 (107)
T 2v94_A 27 IYFEIYHPGEPTPSRKDVKGKLVAMLD--LNPETTVIQYIRSYFGSY 71 (107)
T ss_dssp EEEEEECTTSCCCCHHHHHHHHHHHHT--CCGGGEEEEEEECCTTCS
T ss_pred EEEEEEeCCCCCCCHHHHHHHHHHHHC--CCCCEEEEEeeEecCCCc
Confidence 333333434445568899999999999 899999999999999975
No 17
>1xn9_A 30S ribosomal protein S24E; beta+alpha, GFT structural genomics, protein structure initiative, PSI, NESG, MAR11; NMR {Methanosarcina mazei} SCOP: d.12.1.3
Probab=30.49 E-value=63 Score=28.37 Aligned_cols=35 Identities=26% Similarity=0.194 Sum_probs=31.2
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCcEEEEeeecCCCCC
Q 047902 65 SQLVTTKVLEKLKTRFGNLYTEENIAISGIHTHAGPG 101 (720)
Q Consensus 65 ~~~v~~~V~~~L~~~~G~~i~~~nViisaTHTHSgP~ 101 (720)
...-+.+|+++|++.|+ .+++.|+|-.-.||-|-+
T Consensus 28 ~tpsk~eirekLAk~~~--~~~~~Vvv~~~~t~fG~g 62 (101)
T 1xn9_A 28 STPSRNDVRNKLAAMLN--APLELLVIQRIKTEYGMQ 62 (101)
T ss_dssp SCCCHHHHHHHHHHHTT--CCTTTEEEEEEEECSSSS
T ss_pred CCCCHHHHHHHHHHHHC--CCCCEEEEEeeEecCCCc
Confidence 44457899999999999 899999999999999975
No 18
>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens}
Probab=29.50 E-value=40 Score=29.01 Aligned_cols=25 Identities=20% Similarity=0.462 Sum_probs=18.6
Q ss_pred eeEEEEEEEcCCCCCCc---ceEEEEecc
Q 047902 673 HGLATIEWEVPTKAIPG---VYRLRHFGS 698 (720)
Q Consensus 673 ~s~~~i~W~ip~~~~~G---~YRi~~~G~ 698 (720)
.+.++|.|..|.+. .+ .|||+|++.
T Consensus 21 ~~Sv~LsW~~p~~~-~~~i~~Y~v~~~~~ 48 (104)
T 2dle_A 21 ATSLTLIWKVSDNE-SSSNYTYKIHVAGE 48 (104)
T ss_dssp SSCEEEEEEESCST-TCCSCEEEEEEECS
T ss_pred cCEEEEEEcCCCCC-CCceEEEEEEEECC
Confidence 34599999987653 34 599999875
No 19
>3zxn_A RSBS, anti-sigma-factor antagonist (STAS) domain protei; transcription, gene regulation; 1.90A {Moorella thermoacetica} PDB: 2vy9_A 3ztb_A*
Probab=29.46 E-value=81 Score=27.95 Aligned_cols=47 Identities=6% Similarity=0.229 Sum_probs=35.8
Q ss_pred EEEEEECCEEEEecCCchhHHHHHHHHHHHHHHhhhCCCCCCCCCceEEEEeec
Q 047902 465 IQILRLGKLIILSVPGEFTTMAGRRLREAVKDTLINNGNGEFDNDTHIVIAGLT 518 (720)
Q Consensus 465 vqilriG~l~iv~vPgE~tt~~G~rlr~~v~~~~~~~~~~~~~~~~~vvv~G~a 518 (720)
+.++++++..++.+.||+.......|++.+.+.+... ....+|.=++
T Consensus 5 ~pii~~~~vlvv~l~G~lD~~~a~~l~~~ll~~i~~~-------~~~~vIlDls 51 (123)
T 3zxn_A 5 VPILKVDDYWVVAIEETLHDQSVIQFKEELLHNITGV-------AGKGLVIDIS 51 (123)
T ss_dssp SCEEEETTEEEEECCCCC-CHHHHHHHHHHHHHHTSS-------CCSEEEEECT
T ss_pred ccEEEECCEEEEEEeEeeCHHHHHHHHHHHHHHHHhc-------CCCEEEEEcC
Confidence 3458899999999999999999999999998877542 2455555555
No 20
>1ywx_A 30S ribosomal protein S24E; GFT MRR16, nesgc, structural genomics, PSI, protein structure initiative; NMR {Methanococcus maripaludis} SCOP: d.12.1.3
Probab=28.32 E-value=57 Score=28.72 Aligned_cols=35 Identities=11% Similarity=0.081 Sum_probs=31.2
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCcEEEEeeecCCCCC
Q 047902 65 SQLVTTKVLEKLKTRFGNLYTEENIAISGIHTHAGPG 101 (720)
Q Consensus 65 ~~~v~~~V~~~L~~~~G~~i~~~nViisaTHTHSgP~ 101 (720)
...-+.+|+++|++.|+ .+++.|+|-.-.||-|-+
T Consensus 28 ~tpsk~eirekLAk~~~--~~~d~Vvv~~~~T~fG~g 62 (102)
T 1ywx_A 28 ATPSIKDVKMKLVAVLN--ANKQVLVVDTLDQIFGKL 62 (102)
T ss_dssp CCCCHHHHHHHHHHHHT--SCSTTEEEEEEEECSSSS
T ss_pred CCCCHHHHHHHHHHHHC--CCCCEEEEEccEecCCCc
Confidence 44557899999999999 899999999999999975
No 21
>1uiz_A MIF, macrophage migration inhibitory factor; cytokine, tautomerase; 2.50A {Xenopus laevis} SCOP: d.80.1.3
Probab=26.37 E-value=80 Score=27.36 Aligned_cols=44 Identities=11% Similarity=0.002 Sum_probs=33.8
Q ss_pred CCEEEEEEecccc-ccHH----HHHHHHHHHHHHhCCCCCCCcEEEEeeec
Q 047902 51 GTRFAFVNLDAGM-ASQL----VTTKVLEKLKTRFGNLYTEENIAISGIHT 96 (720)
Q Consensus 51 ~~rvv~Vs~Dl~~-i~~~----v~~~V~~~L~~~~G~~i~~~nViisaTHT 96 (720)
...+++|.+.+.. ...+ +..++-+.|++.+| +++++|.|.-+-.
T Consensus 54 ~~~~~~v~i~~~~g~~~eqk~~l~~~i~~~l~~~lg--i~~~~v~I~~~e~ 102 (115)
T 1uiz_A 54 TDPCAVCSLCSIGKIGGPQNKSYTKLLCDILTKQLN--IPANRVYINYYDL 102 (115)
T ss_dssp CSSCEEEEEEESSCCSHHHHHHHHHHHHHHHHHHHC--CCGGGEEEEEEEC
T ss_pred CCCeEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhC--cCcceEEEEEEEC
Confidence 5788999998775 5544 56667777888899 9999999986544
No 22
>1hfo_A Migration inhibitory factor; tautomerase; 1.65A {Trichinella spiralis} SCOP: d.80.1.3
Probab=25.75 E-value=84 Score=27.08 Aligned_cols=51 Identities=18% Similarity=0.191 Sum_probs=36.6
Q ss_pred EEEEEeCCCCCEEEEEEecccc-ccHH----HHHHHHHHHHHHhCCCCCCCcEEEEeeec
Q 047902 42 TFIVAESSNGTRFAFVNLDAGM-ASQL----VTTKVLEKLKTRFGNLYTEENIAISGIHT 96 (720)
Q Consensus 42 A~vl~~~~~~~rvv~Vs~Dl~~-i~~~----v~~~V~~~L~~~~G~~i~~~nViisaTHT 96 (720)
.+++... ...+++|.+.+.. ...+ +..++-+.|++.+| +++++|.|.-+-.
T Consensus 46 ~~~~~g~--~~~~~~i~i~~~~g~~~eqk~~l~~~i~~~l~~~lg--i~~~~v~I~~~e~ 101 (113)
T 1hfo_A 46 QLSFGGS--TNPAAFGTLMSIGGIEPSRNRDHSAKLFDHLNTKLG--IPKNRMYIHFVNL 101 (113)
T ss_dssp EEEETTB--CSSCEEEEEEESSSCSHHHHHHHHHHHHHHHHHHHC--CCGGGEEEEEEEC
T ss_pred cEEecCC--CCCeEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhC--cCcCeEEEEEEEC
Confidence 3455432 5788999988775 5544 56667777888899 9999999976544
No 23
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=24.72 E-value=1.2e+02 Score=30.28 Aligned_cols=49 Identities=18% Similarity=0.266 Sum_probs=33.0
Q ss_pred EEEEEEEeCCCCCEEEEEEeccccccHHHHHHHHHHHHHHhCCCCCCCcEEEEeeecCC
Q 047902 40 ARTFIVAESSNGTRFAFVNLDAGMASQLVTTKVLEKLKTRFGNLYTEENIAISGIHTHA 98 (720)
Q Consensus 40 ARA~vl~~~~~~~rvv~Vs~Dl~~i~~~v~~~V~~~L~~~~G~~i~~~nViisaTHTHS 98 (720)
+.+++|.++ +.+ |.+|..+ .....+++++.|++..+ .+...|+ .||.|.
T Consensus 75 ~N~ylv~~~---~~~--ilIDtg~-~~~~~~~l~~~i~~~~~--~~I~~Ii--~TH~H~ 123 (270)
T 4eyb_A 75 SNGLIVRDG---GRV--LVVDTAW-TDDQTAQILNWIKQEIN--LPVALAV--VTHAHQ 123 (270)
T ss_dssp EEEEEEEET---TEE--EEESCCS-SHHHHHHHHHHHHHHTC--CCEEEEE--ECSSSH
T ss_pred eEEEEEEEC---CEE--EEEeCCC-CHHHHHHHHHHHHHhcC--CceEEEE--eCCCCh
Confidence 567888763 343 4468764 56667788888888777 5555554 588885
No 24
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=22.30 E-value=3.7e+02 Score=24.10 Aligned_cols=80 Identities=13% Similarity=0.135 Sum_probs=49.3
Q ss_pred CCCCceEEEEEcccCCCCCCCCCCeEEEEEecCCceEEEeeCCCcceEEEEEecCCC------------eeeEEEEEEEc
Q 047902 615 NKGDRPSATFWSANPRYDLLTEGTYAVVEMLQGKRWIPVYDDDDFSLYFKWSLENTS------------FHGLATIEWEV 682 (720)
Q Consensus 615 ~~g~~v~~~F~~a~Prn~l~~~~t~~~Ve~~~~~~W~~v~~D~d~~t~~~w~~~~~~------------~~s~~~i~W~i 682 (720)
+.|+.+.++|.=-||.... ++++-..+....-+..|.+=...++|+..... -.-.++++|.
T Consensus 15 ~~g~~v~~~ltv~N~s~~~------v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~- 87 (120)
T 3isy_A 15 QEPEQIKFNMSLKNQSERA------IEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWK- 87 (120)
T ss_dssp ECSSCEEEEEEEEECSSSC------EEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEES-
T ss_pred cCCCeEEEEEEEEcCCCCc------EEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeC-
Confidence 3678888888888876532 23333333354555555333677777722111 2456777887
Q ss_pred CCCCCCcceEEEEecccccc
Q 047902 683 PTKAIPGVYRLRHFGSSKKA 702 (720)
Q Consensus 683 p~~~~~G~YRi~~~G~~k~~ 702 (720)
...+||.|.++-+--.|.-
T Consensus 88 -~~~~pG~Ytl~a~l~~~~~ 106 (120)
T 3isy_A 88 -EVPEPGTYEVKVTFKGRAE 106 (120)
T ss_dssp -SCCCSEEEEEEEEECCEET
T ss_pred -CCCCCccEEEEEEEEeeec
Confidence 3457999999998877763
No 25
>1u9d_A Hypothetical protein VC0714; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics; 1.70A {Vibrio cholerae o1 biovar eltor str} SCOP: d.80.1.5
Probab=22.06 E-value=3.7e+02 Score=24.19 Aligned_cols=79 Identities=15% Similarity=0.123 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEE---eeecCCCCCcCchhhhccccccccchHHHHHHHHHHHHHHHHHHhcCCcEE
Q 047902 67 LVTTKVLEKLKTRFGNLYTEENIAIS---GIHTHAGPGGYLQYLIYSITSLGFVQQSFDAIVSAIVQSIVQAHNNLKPGS 143 (720)
Q Consensus 67 ~v~~~V~~~L~~~~G~~i~~~nViis---aTHTHSgP~g~~~~~~~~~~~~g~~~~y~~~lv~~iv~AI~~A~~~l~Pa~ 143 (720)
.+...+.+.|++.++ .+.+++-|- ++.-|.| .+ .+ +.++.-.|-.++--+.++..|.+++.++....+-+.
T Consensus 31 ~lS~~Lid~La~i~~--~~~e~fTle~i~s~~i~~G-~~-MP--~VeV~~fgRt~EqK~~la~~IT~av~~~~~~~e~V~ 104 (122)
T 1u9d_A 31 SLVPTLLNELSSLLS--TARNAFTFELINTQYFAEG-GV-YP--MVEVLWFGREQQTQDQIAQVITDQIRQLLGADSHLA 104 (122)
T ss_dssp HHHHHHHHHHHHHHT--CCGGGCEEEECCCCCCCTT-CC-CC--EEEEEESCCCHHHHHHHHHHHHHHHHHHHCTTCCCE
T ss_pred HHhHHHHHHHHHHHC--CCcccEEEEEeeeEEEecC-CC-CC--EEEEEEcCCCHHHHHHHHHHHHHHHHHhCCCCceEE
Confidence 345566677778888 888888654 4555666 21 12 222222356888899999999999999955555566
Q ss_pred EEEEEEEe
Q 047902 144 IFIRKGDV 151 (720)
Q Consensus 144 l~~g~g~~ 151 (720)
+-+..-.-
T Consensus 105 Vif~el~~ 112 (122)
T 1u9d_A 105 VVFIPLQR 112 (122)
T ss_dssp EEEEECCG
T ss_pred EEEEecCH
Confidence 66655443
No 26
>3djh_A Macrophage migration inhibitory factor; homotrimer, cytokine, inflammatory response, isomerase, phosphoprotein; 1.25A {Homo sapiens} SCOP: d.80.1.3 PDB: 1ca7_A* 1ljt_A* 2ooh_A* 2ooz_A* 3b9s_A* 2oow_A* 3ce4_A 3dji_A* 3ijg_A* 3ijj_A* 3smb_A* 3smc_A* 3u18_A* 4f2k_A* 1gd0_A* 1gcz_A* 3jsf_A* 3jsg_A* 3jtu_A* 3l5p_A* ...
Probab=21.64 E-value=1e+02 Score=26.90 Aligned_cols=49 Identities=10% Similarity=0.056 Sum_probs=36.3
Q ss_pred EEEEEeCCCCCEEEEEEeccccc-cH----HHHHHHHHHHHHHhCCCCCCCcEEEEee
Q 047902 42 TFIVAESSNGTRFAFVNLDAGMA-SQ----LVTTKVLEKLKTRFGNLYTEENIAISGI 94 (720)
Q Consensus 42 A~vl~~~~~~~rvv~Vs~Dl~~i-~~----~v~~~V~~~L~~~~G~~i~~~nViisaT 94 (720)
.|.+.. ...+.+++.+-.++. .. .+..++-+.|++++| +++++|.|.-.
T Consensus 46 ~m~fgG--s~~P~a~~~v~sig~~~~~~n~~~s~~i~~~l~~~Lg--i~~~riyI~f~ 99 (114)
T 3djh_A 46 LMAFGG--SSEPCALCSLHSIGKIGGAQNRSYSKLLCGLLAERLR--ISPDRVYINYY 99 (114)
T ss_dssp EEEETT--BCSSCEEEEEEESSCCSHHHHHHHHHHHHHHHHHHHC--CCGGGEEEEEE
T ss_pred eEEEcC--cCCCEEEEEEEEccCCCHHHHHHHHHHHHHHHHHHhC--cCcceEEEEEE
Confidence 455543 367899999987765 33 456677777888899 99999999754
No 27
>2g1d_A 30S ribosomal protein S24E; complete proteome, ribosome; NMR {Thermoplasma acidophilum} SCOP: d.12.1.3
Probab=21.54 E-value=57 Score=28.49 Aligned_cols=37 Identities=11% Similarity=0.124 Sum_probs=32.0
Q ss_pred cccHHHHHHHHHHHHHHhCCCCCCCcEEEEeeecCCCCC
Q 047902 63 MASQLVTTKVLEKLKTRFGNLYTEENIAISGIHTHAGPG 101 (720)
Q Consensus 63 ~i~~~v~~~V~~~L~~~~G~~i~~~nViisaTHTHSgP~ 101 (720)
.-...-+.+|+++|++.|+ .+++.|+|-.-.||-|-+
T Consensus 27 ~~~tpsk~eirekLA~~~~--~~~~~vvv~~~~t~fG~g 63 (98)
T 2g1d_A 27 SSRTPSREEIKELIAKHEG--VDKELVIVDNNKQLTGKH 63 (98)
T ss_dssp TTSCCCHHHHHHHHHHHHH--SCSTTEECCCCCCCSSSS
T ss_pred CCCCCCHHHHHHHHHHHHC--CCCCEEEEEeeEecCCCc
Confidence 3344568899999999999 899999999999999975
No 28
>2xzm_P RPS24E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_P
Probab=21.13 E-value=1.1e+02 Score=28.80 Aligned_cols=43 Identities=19% Similarity=0.302 Sum_probs=34.1
Q ss_pred EEeccccccHHHHHHHHHHHHHHhCCCCCCCcEEEEeeecCCCCC
Q 047902 57 VNLDAGMASQLVTTKVLEKLKTRFGNLYTEENIAISGIHTHAGPG 101 (720)
Q Consensus 57 Vs~Dl~~i~~~v~~~V~~~L~~~~G~~i~~~nViisaTHTHSgP~ 101 (720)
+.+-...-...-..+|+++|++.|+ .+++.|+|-.-.||-|-+
T Consensus 23 ~dV~Hpg~aTpSk~eIrekLAkmy~--~~~d~VvV~g~rT~fGgg 65 (149)
T 2xzm_P 23 LDVLHPDSPTASKEKIREELAKQLK--VDARNVVVYGFSTQYGGG 65 (149)
T ss_dssp EEEECSSSCSCCHHHHHHHHHHHHT--CCGGGEEEEEECCCSSSS
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHC--CCCCEEEEEeeEecCCCc
Confidence 3333333444557799999999999 899999999999999975
No 29
>2wkb_A Macrophage migration inhibitory factor; cytokine; HET: CME; 1.78A {Plasmodium berghei} PDB: 3gad_A 3gac_A 2wkf_A*
Probab=20.61 E-value=90 Score=27.65 Aligned_cols=44 Identities=16% Similarity=0.221 Sum_probs=32.4
Q ss_pred CCEEEEEEecccc-ccH----HHHHHHHHHHHHHhCCCCCCCcEEEEeeec
Q 047902 51 GTRFAFVNLDAGM-ASQ----LVTTKVLEKLKTRFGNLYTEENIAISGIHT 96 (720)
Q Consensus 51 ~~rvv~Vs~Dl~~-i~~----~v~~~V~~~L~~~~G~~i~~~nViisaTHT 96 (720)
...+++|.+.+.. ... .+..++-+.|.+.+| +++++|.|.-+-.
T Consensus 54 ~dp~~~v~I~~~~g~t~eqk~~l~~~i~~~l~~~lg--i~~~~v~I~~~e~ 102 (125)
T 2wkb_A 54 NEGYCFVRLTSIGGINRSNNSLLADKITKILSNHLS--VKPRRVYIEFRDC 102 (125)
T ss_dssp CSSCEEEEEECC-----CTHHHHHHHHHHHHHHHHC--CCGGGEEEEEEC-
T ss_pred CCCcEEEEEEECCCCCHHHHHHHHHHHHHHHHHHhC--cCcceEEEEEEEC
Confidence 4678898888765 333 577788888899999 9999999987644
No 30
>3u5c_Y RP50, 40S ribosomal protein S24-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_U* 3j16_D 3u5g_Y
Probab=20.52 E-value=89 Score=28.90 Aligned_cols=41 Identities=17% Similarity=0.289 Sum_probs=33.6
Q ss_pred eccccccHHHHHHHHHHHHHHhCCCCCCCcEEEEeeecCCCCC
Q 047902 59 LDAGMASQLVTTKVLEKLKTRFGNLYTEENIAISGIHTHAGPG 101 (720)
Q Consensus 59 ~Dl~~i~~~v~~~V~~~L~~~~G~~i~~~nViisaTHTHSgP~ 101 (720)
+.-.+-...-..+|+++|++.|+ .+++.|+|-.-.||-|-+
T Consensus 27 V~HpG~aTpsr~eIrekLAk~y~--~~~d~VvV~g~rT~fG~g 67 (135)
T 3u5c_Y 27 VLHPNRANVSKDELREKLAEVYK--AEKDAVSVFGFRTQFGGG 67 (135)
T ss_dssp EECSSSCCCCHHHHHHHHHTTTT--SCGGGEEEEEEEECTTSS
T ss_pred EEeCCCCCCCHHHHHHHHHHHHC--CCCCEEEEEeeEeccCCc
Confidence 33333344568899999999999 899999999999999975
No 31
>3fwu_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.80A {Leishmania major}
Probab=20.28 E-value=73 Score=28.93 Aligned_cols=44 Identities=18% Similarity=0.144 Sum_probs=35.9
Q ss_pred CCEEEEEEecccccc-----HHHHHHHHHHHHHHhCCCCCCCcEEEEeeec
Q 047902 51 GTRFAFVNLDAGMAS-----QLVTTKVLEKLKTRFGNLYTEENIAISGIHT 96 (720)
Q Consensus 51 ~~rvv~Vs~Dl~~i~-----~~v~~~V~~~L~~~~G~~i~~~nViisaTHT 96 (720)
.+++++|.+-.++.. ..+..++.+.|++++| +++++|+|.-+=.
T Consensus 75 ~dP~a~v~i~sig~~~~e~n~~~s~~i~~~l~~~Lg--I~~~riyI~f~d~ 123 (133)
T 3fwu_A 75 TDPVACVRVEALGGYGPSEPEKVTSIVTAAITKECG--IVADRIFVLYFSP 123 (133)
T ss_dssp CSSCEEEEEECTTCCCTTHHHHHHHHHHHHHHHHHC--CCGGGEEEEEECC
T ss_pred CCCEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhC--cChhhEEEEEEEH
Confidence 578899999877643 3677788888999999 9999999987766
Done!