BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047904
(448 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1AOZ|B Chain B, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1ASO|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASO|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASP|A Chain A, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASP|B Chain B, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASQ|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASQ|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
Length = 552
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 131/478 (27%), Positives = 200/478 (41%), Gaps = 82/478 (17%)
Query: 35 RHYEFDIK------------LQNLNGKFPGPRIVAREGDQL-----------------HG 65
RHY+++++ + +NG+FPGP I A GD + HG
Sbjct: 4 RHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHG 63
Query: 66 IRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVGRRGKLWWHAHMTCLPLWESAGEWFNG 125
I + + WADG A I+QC I G++ YNFT V G ++H H L + SAG +
Sbjct: 64 ILQRGTPWADGTASISQCAINPGETFFYNFT-VDNPGTFFYHGH---LGMQRSAGLY--- 116
Query: 126 GPKAIINQALQTGGGPNASDAFTINGLSGSLYNRSAKEFQVE------DMIFEEKN---E 176
++I Q P D IN L +++S + +V I E +
Sbjct: 117 --GSLIVDPPQGKKEPFHYDG-EINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTILLN 173
Query: 177 GRALVDVIL-----SNQE--YIGEMNAGRDMILKVKPGKTYLLRIINAALNDELFFSIAN 229
GR D + SN E + + I V P KTY +RI + L F+I N
Sbjct: 174 GRGQFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGN 233
Query: 230 HTLKVVEADVVYVKPFETETLLIAPGQ------TTNGTFDNSTVAGILEYERPPN----- 278
H L VVEAD YV+PF T + I G+ TT+ + + R PN
Sbjct: 234 HQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGL 293
Query: 279 --FHHSSNSIKKLPLF-KPILHALKDISFATCFTSKLRSLASTQFPANVPQNVDRRFFF- 334
++ NS+ KLP P A D + FT ++ + + P P +RR F
Sbjct: 294 TLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKP---PVKFNRRIFLL 350
Query: 335 -TVGLGTSPCQTSVNNISFVMPTTALFQAHFIGKPNGVYTPDF-PTSPLIPFNYT-GNPP 391
T + + ++N++S +P T A K N ++ D P + P +Y PP
Sbjct: 351 NTQNVINGYVKWAINDVSLALPPTPYLGAM---KYNLLHAFDQNPPPEVFPEDYDIDTPP 407
Query: 392 NNTMVSXXXXXXXXXXXXXXXXIMQDTSILG---TESHPLHLHGFNFFVIGQGFGNFN 446
N I+Q+ +++ +E+HP HLHG +F+V+G G G F+
Sbjct: 408 TNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFS 465
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
pdb|3KW7|B Chain B, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
Length = 502
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 41/233 (17%)
Query: 47 NGKFPGPRIVAREGDQL---------------------HGIRRLRSGWADGPAYITQCPI 85
NG FPGP I +GD HG+ + + WADGPA++ QCPI
Sbjct: 28 NGVFPGPLITGNKGDNFQINVIDNLTNATMLKTTTIHWHGLFQHGTNWADGPAFVNQCPI 87
Query: 86 QTGQSCVYNFTIVGRRGKLWWHAHMTCLPLWESAGEWFNG--GPKAIINQALQTGGGPNA 143
+G S +Y+FT+ + G W+H+H++ ++ +G GP + + + +
Sbjct: 88 ASGNSFLYDFTVPDQAGTFWYHSHLST--------QYCDGLRGPLVVYDPSDPYASMYDV 139
Query: 144 SDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILK 203
D T+ LS Y+ +AK F + V+++ NA ++
Sbjct: 140 DDDTTVITLS-DWYHTAAKLGPA----FPPNADS-----VLINGLGRFAGGNASDLAVIT 189
Query: 204 VKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQ 256
V+ K Y R+++ + + FSI H + ++E D V +P E +++ I Q
Sbjct: 190 VEQNKRYRFRLVSLSCDPNFTFSIDGHNMTIIEVDGVNHEPLEVDSIQIFASQ 242
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada
Length = 580
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 104/271 (38%), Gaps = 72/271 (26%)
Query: 32 GITRHYEFDIK------------LQNLNGKFPGPRIVAREGDQL---------------- 63
G+TR Y ++ NG PGP I+A GD L
Sbjct: 65 GVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIH 124
Query: 64 -HGIRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVGRRGKLWWHAHMTCLPLWESAGEW 122
HGIR+L S DG +TQCPI G + Y F + + G W+H+H
Sbjct: 125 WHGIRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQVT-QYGTTWYHSHF------------ 171
Query: 123 FNGGPKAIINQALQTGGGPNASDAFTINGLSGSLYNRSAKEFQVEDM----IFEEKNEGR 178
+LQ G G ING + + Y+ ++D +FE + R
Sbjct: 172 -----------SLQYGDG--LFGPLIINGPATADYDEDVGVIFLQDWAHESVFEIWDTAR 218
Query: 179 ALVDVILSNQEYIGE-------------MNAGRDMILKVKPGKTYLLRIINAALNDELFF 225
L N G + G+ L G Y LR+IN ++ F
Sbjct: 219 LGAPPALENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEF 278
Query: 226 SIANHTLKVVEADVVYVKPFETETLLIAPGQ 256
+I NHTL V+ D+V + P+ T+TLLI GQ
Sbjct: 279 AIDNHTLTVIANDLVPIVPYTTDTLLIGIGQ 309
Score = 32.0 bits (71), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 426 HPLHLHGFNFFVIGQGFGNFNPN 448
HP+HLHG +FF++ Q FN +
Sbjct: 463 HPIHLHGHDFFIVAQETDVFNSD 485
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67
A Resolution
Length = 580
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 104/271 (38%), Gaps = 72/271 (26%)
Query: 32 GITRHYEFDIK------------LQNLNGKFPGPRIVAREGDQL---------------- 63
G+TR Y ++ NG PGP I+A GD L
Sbjct: 65 GVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIH 124
Query: 64 -HGIRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVGRRGKLWWHAHMTCLPLWESAGEW 122
HGIR+L S DG +TQCPI G + Y F + + G W+H+H
Sbjct: 125 WHGIRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQVT-QYGTTWYHSHF------------ 171
Query: 123 FNGGPKAIINQALQTGGGPNASDAFTINGLSGSLYNRSAKEFQVEDM----IFEEKNEGR 178
+LQ G G ING + + Y+ ++D +FE + R
Sbjct: 172 -----------SLQYGDG--LFGPLIINGPATADYDEDVGVIFLQDWAHESVFEIWDTAR 218
Query: 179 ALVDVILSNQEYIGE-------------MNAGRDMILKVKPGKTYLLRIINAALNDELFF 225
L N G + G+ L G Y LR+IN ++ F
Sbjct: 219 LGAPPALENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEF 278
Query: 226 SIANHTLKVVEADVVYVKPFETETLLIAPGQ 256
+I NHTL V+ D+V + P+ T+TLLI GQ
Sbjct: 279 AIDNHTLTVIANDLVPIVPYTTDTLLIGIGQ 309
Score = 32.0 bits (71), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 426 HPLHLHGFNFFVIGQGFGNFNPN 448
HP+HLHG +FF++ Q FN +
Sbjct: 463 HPIHLHGHDFFIVAQETDVFNSD 485
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev
Length = 497
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 100/239 (41%), Gaps = 52/239 (21%)
Query: 46 LNGKFPGPRIVAREGDQL---------------------HGIRRLRSGWADGPAYITQCP 84
+N FP P I +GD+ HG + + WADGPA++ QCP
Sbjct: 27 VNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGTNWADGPAFVNQCP 86
Query: 85 IQTGQSCVYNFTIVGRRGKLWWHAHMTCLPLWESAGEWFNG--GPKAIINQALQTGGGPN 142
I TG + +Y+F + + G W+H+H++ ++ +G GP + + PN
Sbjct: 87 ISTGHAFLYDFQVPDQAGTFWYHSHLST--------QYCDGLRGPIVVYD--------PN 130
Query: 143 ASDAFTINGLSGSLY--NRSAKEFQVEDMIFEEKNEGRAL--VDVILSNQEYIGEMNAGR 198
A SLY + + + D G + D L N
Sbjct: 131 DPHA--------SLYDVDDDSTVITLADWYHLAAKVGAPVPTADATLINGLGRSAATLAA 182
Query: 199 DM-ILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQ 256
D+ ++ V GK Y R+++ + + FSI H+L V+EAD V +KP ++L I Q
Sbjct: 183 DLAVITVTKGKRYRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDSLQIFAAQ 241
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5
pdb|4A2E|A Chain A, Crystal Structure Of A Coriolopsis Gallica Laccase At 1.7
A Resolution Ph 5.5
pdb|4A2H|A Chain A, Crystal Structure Of Laccase From Coriolopsis Gallica Ph
7.0
pdb|4A2G|A Chain A, Coriolopsis Gallica Laccase Collected At 8.98 Kev
Length = 496
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 100/239 (41%), Gaps = 52/239 (21%)
Query: 46 LNGKFPGPRIVAREGDQL---------------------HGIRRLRSGWADGPAYITQCP 84
+N FP P I +GD+ HG + + WADGPA++ QCP
Sbjct: 27 VNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGTNWADGPAFVNQCP 86
Query: 85 IQTGQSCVYNFTIVGRRGKLWWHAHMTCLPLWESAGEWFNG--GPKAIINQALQTGGGPN 142
I TG + +Y+F + + G W+H+H++ ++ +G GP + + PN
Sbjct: 87 ISTGHAFLYDFQVPDQAGTFWYHSHLST--------QYCDGLRGPIVVYD--------PN 130
Query: 143 ASDAFTINGLSGSLY--NRSAKEFQVEDMIFEEKNEGRAL--VDVILSNQEYIGEMNAGR 198
A SLY + + + D G + D L N
Sbjct: 131 DPHA--------SLYDVDDDSTVITLADWYHLAAKVGAPVPTADATLINGLGRSAATLAA 182
Query: 199 DM-ILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQ 256
D+ ++ V GK Y R+++ + + FSI H+L V+EAD V +KP ++L I Q
Sbjct: 183 DLAVITVTKGKRYRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDSLQIFAAQ 241
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The
Ligninolytic Fungus Pycnoporus Cinnabarinus
Length = 497
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 104/244 (42%), Gaps = 43/244 (17%)
Query: 46 LNGKFPGPRIVAREGDQL---------------------HGIRRLRSGWADGPAYITQCP 84
+NG P P I +GD+ HG + + WADGPA++ QCP
Sbjct: 27 VNGITPAPLITGNKGDRFQLNVIDQLTNHTMLKTSSIHWHGFFQQGTNWADGPAFVNQCP 86
Query: 85 IQTGQSCVYNFTIVGRRGKLWWHAHMTCLPLWESAGEWFNG--GPKAIINQALQTGGGPN 142
I +G S +Y+F + + G W+H+H++ ++ +G GP + + PN
Sbjct: 87 IASGHSFLYDFQVPDQAGTFWYHSHLST--------QYCDGLRGPFVVYD--------PN 130
Query: 143 ASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDM-I 201
A + + A + V + G D L N A D+ +
Sbjct: 131 DPHASLYDIDNDDTVITLADWYHVAAKLGPRFPFGS---DSTLINGLGRTTGIAPSDLAV 187
Query: 202 LKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGT 261
+KV GK Y R+++ + + FSI NHT+ ++EAD + +P E +++ I Q +
Sbjct: 188 IKVTQGKRYRFRLVSLSCDPNHTFSIDNHTMTIIEADSINTQPLEVDSIQIFAAQRYSFV 247
Query: 262 FDNS 265
D S
Sbjct: 248 LDAS 251
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta
pdb|3V9C|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta At
Low Dose Of Ionization Radiation
Length = 499
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 108/260 (41%), Gaps = 47/260 (18%)
Query: 46 LNGKFPGPRIVAREGDQL---------------------HGIRRLRSGWADGPAYITQCP 84
+NG PGP + GD+ HG + + WADGPA+I QCP
Sbjct: 27 VNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFINQCP 86
Query: 85 IQTGQSCVYNFTIVGRRGKLWWHAHMTCLPLWESAGEWFNG--GPKAIINQALQTGGGPN 142
I G S +Y+F + + G W+H+H++ ++ +G GP + + +
Sbjct: 87 ISPGHSFLYDFQVPDQAGTFWYHSHLST--------QYCDGLRGPFVVYDPNDPHASRYD 138
Query: 143 ASDAFTINGLSGSLYNRSAK---EFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRD 199
+ T+ L+ Y+ +AK F +GRA D + E++
Sbjct: 139 VDNDDTVITLA-DWYHTAAKLGPRFPGGADATLINGKGRAPSD-------SVAELS---- 186
Query: 200 MILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTN 259
++KV GK Y R+++ + N FSI H L ++E D V +P E +++ I Q +
Sbjct: 187 -VIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYS 245
Query: 260 GTFDNSTVAGILEYERPPNF 279
D + PNF
Sbjct: 246 FVLDANQAVDNYWIRANPNF 265
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta
Length = 499
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 108/260 (41%), Gaps = 47/260 (18%)
Query: 46 LNGKFPGPRIVAREGDQL---------------------HGIRRLRSGWADGPAYITQCP 84
+NG PGP + GD+ HG + + WADGPA+I QCP
Sbjct: 27 VNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFINQCP 86
Query: 85 IQTGQSCVYNFTIVGRRGKLWWHAHMTCLPLWESAGEWFNG--GPKAIINQALQTGGGPN 142
I G S +Y+F + + G W+H+H++ ++ +G GP + + +
Sbjct: 87 ISPGHSFLYDFQVPDQAGTFWYHSHLST--------QYCDGLRGPFVVYDPNDPHASRYD 138
Query: 143 ASDAFTINGLSGSLYNRSAK---EFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRD 199
+ T+ L+ Y+ +AK F +GRA D + E++
Sbjct: 139 VDNDDTVITLA-DWYHTAAKLGPRFPGGADATLINGKGRAPSD-------SVAELS---- 186
Query: 200 MILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTN 259
++KV GK Y R+++ + N FSI H L ++E D V +P E +++ I Q +
Sbjct: 187 -VIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYS 245
Query: 260 GTFDNSTVAGILEYERPPNF 279
D + PNF
Sbjct: 246 FVLDANQAVDNYWIRANPNF 265
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii
Complexed With P-Methylbenzoate
pdb|2HRH|A Chain A, Crystal Strucure Of Blue Laccase From Trametes Trogii
Length = 496
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 101/236 (42%), Gaps = 46/236 (19%)
Query: 46 LNGKFPGPRIVAREGDQL---------------------HGIRRLRSGWADGPAYITQCP 84
+N FP P I +GD+ HG + + WADGPA++ QCP
Sbjct: 27 VNDVFPSPLITGNKGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGTNWADGPAFVNQCP 86
Query: 85 IQTGQSCVYNFTIVGRRGKLWWHAHMTCLPLWESAGEWFNG--GPKAIINQALQTGGGPN 142
I TG + +Y+F + + G W+H+H++ ++ +G GP + + +
Sbjct: 87 ISTGHAFLYDFQVPDQAGTFWYHSHLST--------QYCDGLRGPIVVYDPQDPHKSLYD 138
Query: 143 ASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSN--QEYIGEMNAGRDM 200
D T+ L+ Y+ +AK D L N I +NA
Sbjct: 139 VDDDSTVITLA-DWYHLAAK-----------VGSPVPTADATLINGLGRSIDTLNADL-A 185
Query: 201 ILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQ 256
++ V GK Y R+++ + + FSI H+L V+EAD V +KP +++ I Q
Sbjct: 186 VITVTKGKRYRFRLVSLSCDPNHVFSIDGHSLTVIEADSVNLKPQTVDSIQIFAAQ 241
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|B Chain B, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|C Chain C, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6W|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6X|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6Z|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T71|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
Length = 495
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 97/235 (41%), Gaps = 39/235 (16%)
Query: 45 NLNGKFPGPRIVAREGDQL---------------------HGIRRLRSGWADGPAYITQC 83
N G FPGP I GD HG + + WADGPA+ITQC
Sbjct: 27 NAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFITQC 86
Query: 84 PIQTGQSCVYNFTIVGRRGKLWWHAHMTCLPLWESAGEWFNG--GPKAIINQALQTGGGP 141
PI G S YNF + G G W+H+H+T ++ +G GP + +
Sbjct: 87 PIIVGNSFSYNFNVPGMAGTYWYHSHLTT--------QYCDGLRGPFVVYDPNDPDANLY 138
Query: 142 NASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMI 201
+ D TI L+ Y+ AKE I + L+D + + + +
Sbjct: 139 DVDDDTTIITLA-DWYHVLAKEMGAGGAITADS----TLIDGLGRTHVNVAAVPLS---V 190
Query: 202 LKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQ 256
+ V+ GK Y +R+++ + + FSI H + ++E D V + + + I Q
Sbjct: 191 ITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQ 245
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|B Chain B, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|C Chain C, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|D Chain D, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
Length = 499
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 96/240 (40%), Gaps = 53/240 (22%)
Query: 46 LNGKFPGPRIVAREGDQL---------------------HGIRRLRSGWADGPAYITQCP 84
+NG PGP I GD+ HG + + WADGPA+I QCP
Sbjct: 27 VNGGTPGPLITGNMGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQKGTNWADGPAFINQCP 86
Query: 85 IQTGQSCVYNFTIVGRRGKLWWHAHMTCLPLWESAGEWFNG--GPKAIINQALQTGGGPN 142
I +G S +Y+F + + G W+H+H++ ++ +G GP +
Sbjct: 87 ISSGHSFLYDFQVPDQAGTFWYHSHLST--------QYCDGLRGPFVV------------ 126
Query: 143 ASDAFTINGLSGSLYNRSAKE--FQVEDMIFEEKNEGRAL---VDVILSNQEYIGEMNAG 197
+ N + LY+ + + D G A D L N +
Sbjct: 127 ----YDPNDPAADLYDVDNDDTVITLVDWYHVAAKLGPAFPLGADATLINGKGRSPSTTT 182
Query: 198 RDM-ILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQ 256
D+ ++ V PGK Y R+++ + + FSI H + ++E D + P +++ I Q
Sbjct: 183 ADLSVISVTPGKRYRFRLVSLSCDPNYTFSIDGHNMTIIETDSINTAPLVVDSIQIFAAQ 242
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
pdb|2QT6|B Chain B, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
Length = 498
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 97/235 (41%), Gaps = 43/235 (18%)
Query: 46 LNGKFPGPRIVAREGDQL---------------------HGIRRLRSGWADGPAYITQCP 84
+N FP P I GD HG + + WADGPA+I QCP
Sbjct: 27 VNNVFPAPLITGNMGDNFQLNLVNQMTNHTMLKTTSIHWHGFFQKGTNWADGPAFINQCP 86
Query: 85 IQTGQSCVYNFTIVGRRGKLWWHAHMTCLPLWESAGEWFNG--GPKAIINQALQTGGGPN 142
I +G S +Y+F + G+ G W+H+H++ ++ +G GP + + PN
Sbjct: 87 IASGNSFLYDFQVPGQAGTFWYHSHLST--------QYCDGLRGPFVVYD--------PN 130
Query: 143 ASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDM-I 201
A + S A + V + +G D L N D+ +
Sbjct: 131 DPHANLYDVDDESTVITLADWYHVAAKLGPRFPKG---ADSTLINGLGRSTSTPTADLAV 187
Query: 202 LKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQ 256
+ V GK Y R+++ + + FSI +H L V+EAD V +P +++ I Q
Sbjct: 188 ISVTKGKRYRFRLVSLSCDPNYTFSIDSHQLTVIEADGVSTQPVTVDSIQIFAAQ 242
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6
A Resolution
Length = 499
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 97/240 (40%), Gaps = 53/240 (22%)
Query: 46 LNGKFPGPRIVAREGDQL---------------------HGIRRLRSGWADGPAYITQCP 84
+NG PGP I +GDQ HG + + WADGPA++ QCP
Sbjct: 27 VNGGTPGPLITGNKGDQFQLNVINNLTNFTMLKSTSVHWHGFFQKGTNWADGPAFVNQCP 86
Query: 85 IQTGQSCVYNFTIVGRRGKLWWHAHMTCLPLWESAGEWFNG--GPKAIINQALQTGGGPN 142
I G S +Y+F+ + G W+H+H++ ++ +G GP +
Sbjct: 87 IAAGSSFLYDFSTPIQAGTFWYHSHLST--------QYCDGDRGPFVV------------ 126
Query: 143 ASDAFTINGLSGSLYNRSAKE--FQVEDMIFEEKNEGRAL---VDVILSNQEYIGEMNAG 197
+ N S +LY+ + D G A D L N + G +
Sbjct: 127 ----YDPNDPSANLYDVDNLNTVITLTDWYHTAAQNGPAKPGGADATLINGQGRGPSSPS 182
Query: 198 RDM-ILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQ 256
D+ ++ V GK Y R+++ + + FSI H + +++ D + V+P + I Q
Sbjct: 183 ADLAVISVTAGKRYRFRLVSNSCDPNYTFSIDGHQMTIIQVDSINVQPLVVLKIQIYAAQ 242
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From
Hemihedrally Twinned Crystals
Length = 521
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 148/384 (38%), Gaps = 50/384 (13%)
Query: 64 HGIRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVGRRGKLWWHAHMTCLPLWESAGEWF 123
HG + + DGPA++ QCPI +S VY+F + G+ G W+H+H++ G +
Sbjct: 87 HGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFV 146
Query: 124 NGGPKAIINQALQTGGGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDV 183
P + L +AS TI SL ++F N+ D
Sbjct: 147 VYDPN---DPHLSLYDVDDASTVITIADWYHSL----------STVLFPNPNKAPPAPDT 193
Query: 184 ILSNQEYIGEMN--AGRDMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVY 241
L N N AG+ ++ V+ GK Y RI++ + FSI H + V+E D V
Sbjct: 194 TLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVS 253
Query: 242 VKPFETETLLIAPGQTTNGTFD-NSTVAGILEYERPPNFHHSSNSIKKLPLFKPILHALK 300
+P ++L I GQ + + N V P N + +F+ A+
Sbjct: 254 HQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVA 313
Query: 301 DISFATCFTSKLRS-----LASTQFPAN-VPQNVDRRFFFTVGLGTSPCQTSVNNISFVM 354
+ + + + L L + P N VP D +G + ++N F+
Sbjct: 314 EPTTSQNSGTALNEANLIPLINPGAPGNPVPGGADINLNLRIGRNATTADFTINGAPFIP 373
Query: 355 PTTALFQAHFIGKPNGVYTPDFPTSPLIPFNYTGNPPNNTMVSXXXXXXXXXXXXXXXXI 414
PT + +GV P+ L+P + P N ++
Sbjct: 374 PTVPVLLQIL----SGVTNPN----DLLPGGAVISLPANQVI------------------ 407
Query: 415 MQDTSILGTESHPLHLHGFNFFVI 438
+ SI G +HP HLHG NF V+
Sbjct: 408 --EISIPGGGNHPFHLHGHNFDVV 429
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A
Laccase From Trametes Versicolor In Its Oxidised Form
Containing A Full Complement Of Copper Ions
Length = 499
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 106/260 (40%), Gaps = 47/260 (18%)
Query: 46 LNGKFPGPRIVAREGDQL---------------------HGIRRLRSGWADGPAYITQCP 84
+NG FP P I ++GD+ HG + + WADGPA++ QCP
Sbjct: 27 VNGVFPSPLITGKKGDRFQLNVVDTLTNHTMLKSTSIHWHGFFQAGTNWADGPAFVNQCP 86
Query: 85 IQTGQSCVYNFTIVGRRGKLWWHAHMTCLPLWESAGEWFNG--GPKAIINQALQTGGGPN 142
I +G S +Y+F + + G W+H+H++ ++ +G GP + + +
Sbjct: 87 IASGHSFLYDFHVPDQAGTFWYHSHLST--------QYCDGLRGPFVVYDPKDPHASRYD 138
Query: 143 ASDAFTINGLSGSLYNRSAK---EFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRD 199
+ T+ L+ Y+ +A+ F + GR+
Sbjct: 139 VDNESTVITLT-DWYHTAARLGPRFPLGADATLINGLGRS------------ASTPTAAL 185
Query: 200 MILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTN 259
++ V+ GK Y R+++ + + FSI H L V+E D + +P +++ I Q +
Sbjct: 186 AVINVQHGKRYRFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQRYS 245
Query: 260 GTFDNSTVAGILEYERPPNF 279
+ + G PNF
Sbjct: 246 FVLNANQTVGNYWIRANPNF 265
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a
Resolution
Length = 499
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 96/237 (40%), Gaps = 47/237 (19%)
Query: 46 LNGKFPGPRIVAREGDQL---------------------HGIRRLRSGWADGPAYITQCP 84
+NG PGP + GD+ HG + + WADGPA+I QCP
Sbjct: 27 VNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKTTSVHWHGFFQQGTNWADGPAFINQCP 86
Query: 85 IQTGQSCVYNFTIVGRRGKLWWHAHMTCLPLWESAGEWFNG--GPKAIINQALQTGGGPN 142
I G S +Y+F + + G W+H+H++ ++ +G GP + + +
Sbjct: 87 ISPGHSFLYDFQVPNQAGTFWYHSHLST--------QYCDGLRGPFVVYDPNDPHASRYD 138
Query: 143 ASDAFTINGLSGSLYNRSAK---EFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRD 199
+ T+ L+ Y+ +AK F +GRA D +
Sbjct: 139 VDNDDTVITLA-DWYHTAAKLGPRFPAGADATLINGKGRAPSDT------------SAEL 185
Query: 200 MILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQ 256
++KV GK R+++ + + FSI H L ++E D +P +++ I Q
Sbjct: 186 SVIKVTKGKRXRFRLVSLSCDPNFTFSIDGHNLTIIEVDSSNSQPLSVDSIQIFAAQ 242
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a
Resolution
Length = 499
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 101/261 (38%), Gaps = 49/261 (18%)
Query: 46 LNGKFPGPRIVAREGDQL---------------------HGIRRLRSGWADGPAYITQCP 84
+NG PGP + GD+ HG + + WADGPA+I QCP
Sbjct: 27 VNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKTTSVHWHGFFQQGTNWADGPAFINQCP 86
Query: 85 IQTGQSCVYNFTIVGRRGKLWWHAHMTCLPLWESAGEWFNG--GPKAIINQALQTGGGPN 142
I G S +Y+F + + G W+H+H++ ++ +G GP + + PN
Sbjct: 87 ISPGHSFLYDFQVPNQAGTFWYHSHLST--------QYCDGLRGPFVVYD--------PN 130
Query: 143 ASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRAL---VDVILSNQEYIGEMNAGRD 199
A S + + D G A D L N + ++
Sbjct: 131 DPHA------SRYDVDNDDTTITLADWYHTAAKLGPAFPNGADSTLINGKGRAPSDSSAQ 184
Query: 200 M-ILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTT 258
+ ++ V GK R+++ + + FSI H ++E D V +P T+++ I Q
Sbjct: 185 LSVVSVTKGKRXRFRLVSLSCDPNFTFSIDGHNNTIIETDSVNSQPLNTDSIQIFAAQRY 244
Query: 259 NGTFDNSTVAGILEYERPPNF 279
+ T + + PNF
Sbjct: 245 SFTLNANQAVDNYWIRANPNF 265
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus
Length = 504
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 92/223 (41%), Gaps = 25/223 (11%)
Query: 45 NLNGKFPGPRIVAREGDQLHGIRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVGRRGKL 104
N+ P ++ HG+ + + WADG + QCPI G + +Y FT G G
Sbjct: 47 NVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTF 106
Query: 105 WWHAHMTCLPLWESAGEWFNG--GPKAIINQALQTGGGPNASDAFTINGLSGSLYNRSAK 162
W+H+H ++ +G GP I + + D TI L+ Y+ A
Sbjct: 107 WYHSHFGT--------QYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLA-DWYHIPAP 157
Query: 163 EFQVEDMIFEEKNEGRALVDVILSNQE--YIGEMNAGRDMILKVKPGKTYLLRIINAALN 220
Q G A D L N + Y+G A I+ V+ GK Y +R+I+ + +
Sbjct: 158 SIQ-----------GAAQPDATLINGKGRYVGGP-AAELSIVNVEQGKKYRMRLISLSCD 205
Query: 221 DELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGTFD 263
FSI H L ++E D +P + L I GQ + D
Sbjct: 206 PNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLD 248
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68
A Resolution
Length = 503
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 92/223 (41%), Gaps = 25/223 (11%)
Query: 45 NLNGKFPGPRIVAREGDQLHGIRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVGRRGKL 104
N+ P ++ HG+ + + WADG + QCPI G + +Y FT G G
Sbjct: 47 NVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTF 106
Query: 105 WWHAHMTCLPLWESAGEWFNG--GPKAIINQALQTGGGPNASDAFTINGLSGSLYNRSAK 162
W+H+H ++ +G GP I + + D TI L+ Y+ A
Sbjct: 107 WYHSHFGT--------QYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLA-DWYHIPAP 157
Query: 163 EFQVEDMIFEEKNEGRALVDVILSNQE--YIGEMNAGRDMILKVKPGKTYLLRIINAALN 220
Q G A D L N + Y+G A I+ V+ GK Y +R+I+ + +
Sbjct: 158 SIQ-----------GAAQPDATLINGKGRYVGGP-AAELSIVNVEQGKKYRMRLISLSCD 205
Query: 221 DELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGTFD 263
FSI H L ++E D +P + L I GQ + D
Sbjct: 206 PNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLD 248
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|1GW0|B Chain B, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|2IH8|A Chain A, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH8|B Chain B, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH9|A Chain A, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|2IH9|B Chain B, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|3FU7|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU9|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3FU9|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3QPK|A Chain A, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
pdb|3QPK|B Chain B, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
Length = 559
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 107/475 (22%), Positives = 168/475 (35%), Gaps = 114/475 (24%)
Query: 26 LAEPAFGITRHYEFDI---------------KLQNLNGKFPGPRIVAREGDQL------- 63
++ P G+T+ Y F++ K+ +NG GP IVA GD +
Sbjct: 25 VSTPDTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINN 84
Query: 64 ----------HGIRRLRSGWADGPAYITQCPIQ-TGQSCVYNFTIVGRRGKLWWHAHMTC 112
HGI + + DG +T+CPI G Y + + G W+H+H +
Sbjct: 85 LVTNGTSIHWHGIHQKDTNLHDGANGVTECPIPPKGGQRTYRWR-ARQYGTSWYHSHFSA 143
Query: 113 LPLWESAGEWFNGGPKAIINQALQTGGGPNASDAFTINGLSGSLYNRSAKEFQV------ 166
Q G G ING + Y+ F +
Sbjct: 144 -----------------------QYGNG--VVGTIQINGPASLPYDIDLGVFPITDYYYR 178
Query: 167 --EDMIFEEKNEGRALVDVILSNQEYIG-EMNAGRDMILKVKPGKTYLLRIINAALNDEL 223
+D++ +N D +L N + G+ + + PGK + LRI+N + +
Sbjct: 179 AADDLVHFTQNNAPPFSDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHF 238
Query: 224 FFSIANHTLKVVEADVVYVKPFETETLLIAPGQTT---------------NGTFDNSTVA 268
S+ NHT+ V+ AD+V V ++L +A GQ N TF
Sbjct: 239 QVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAAC 298
Query: 269 GILEYERPPNFHHSSNSIKKLPLFK---PILHALKDISFATCFTSKLRSLASTQFPANVP 325
G P H + + LP + P+ H D T +R + VP
Sbjct: 299 GGSLNPHPAAIFHYAGAPGGLPTDEGTPPVDHQCLD-------TLDVRPV--------VP 343
Query: 326 QNVDRRFFFTVGLGTSPCQTSVNNISFVMPTTALFQAHFIGKPNGVYTPDFPTSPLIPFN 385
++V F T P ++ + T L F+ K NG P+I +
Sbjct: 344 RSVPVNSFVKRPDNTLP-------VALDLTGTPL----FVWKVNGSDINVDWGKPIIDYI 392
Query: 386 YTGNPPNNTMVSXXXXXXXXXXXXXXXXIMQDTSILGTESHPLHLHGFNFFVIGQ 440
TGN + VS I D + HP+HLHG +F V+G+
Sbjct: 393 LTGN--TSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGR 445
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase
pdb|3DKH|B Chain B, L559a Mutant Of Melanocarpus Albomyces Laccase
Length = 559
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 107/475 (22%), Positives = 168/475 (35%), Gaps = 114/475 (24%)
Query: 26 LAEPAFGITRHYEFDI---------------KLQNLNGKFPGPRIVAREGDQL------- 63
++ P G+T+ Y F++ K+ +NG GP IVA GD +
Sbjct: 25 VSTPDTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINN 84
Query: 64 ----------HGIRRLRSGWADGPAYITQCPIQ-TGQSCVYNFTIVGRRGKLWWHAHMTC 112
HGI + + DG +T+CPI G Y + + G W+H+H +
Sbjct: 85 LVTNGTSIHWHGIHQKDTNLHDGANGVTECPIPPKGGQRTYRWR-ARQYGTSWYHSHFSA 143
Query: 113 LPLWESAGEWFNGGPKAIINQALQTGGGPNASDAFTINGLSGSLYNRSAKEFQV------ 166
Q G G ING + Y+ F +
Sbjct: 144 -----------------------QYGNG--VVGTIQINGPASLPYDIDLGVFPITDYYYR 178
Query: 167 --EDMIFEEKNEGRALVDVILSNQEYIG-EMNAGRDMILKVKPGKTYLLRIINAALNDEL 223
+D++ +N D +L N + G+ + + PGK + LRI+N + +
Sbjct: 179 AADDLVHFTQNNAPPFSDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHF 238
Query: 224 FFSIANHTLKVVEADVVYVKPFETETLLIAPGQTT---------------NGTFDNSTVA 268
S+ NHT+ V+ AD+V V ++L +A GQ N TF
Sbjct: 239 QVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAAC 298
Query: 269 GILEYERPPNFHHSSNSIKKLPLFK---PILHALKDISFATCFTSKLRSLASTQFPANVP 325
G P H + + LP + P+ H D T +R + VP
Sbjct: 299 GGSLNPHPAAIFHYAGAPGGLPTDEGTPPVDHQCLD-------TLDVRPV--------VP 343
Query: 326 QNVDRRFFFTVGLGTSPCQTSVNNISFVMPTTALFQAHFIGKPNGVYTPDFPTSPLIPFN 385
++V F T P ++ + T L F+ K NG P+I +
Sbjct: 344 RSVPVNSFVKRPDNTLP-------VALDLTGTPL----FVWKVNGSDINVDWGKPIIDYI 392
Query: 386 YTGNPPNNTMVSXXXXXXXXXXXXXXXXIMQDTSILGTESHPLHLHGFNFFVIGQ 440
TGN + VS I D + HP+HLHG +F V+G+
Sbjct: 393 LTGN--TSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGR 445
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|B Chain B, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|C Chain C, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|D Chain D, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|E Chain E, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|F Chain F, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
Length = 534
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 98/230 (42%), Gaps = 43/230 (18%)
Query: 47 NGKFPGPRIVAREGDQL-----------------HGIRRLRSGWADGPAYITQCPIQTGQ 89
NG+FP P I +GD++ HG+ + + DG ++TQCPI G
Sbjct: 28 NGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQCPIAPGS 87
Query: 90 SCVYNFTIVGRRGKLWWHAHMTCLPLWESAGEWFNGGPKAIINQALQTGGGPNASD---A 146
+ +YNFT+ G W+H+H + G++ +G I ++ P D +
Sbjct: 88 TMLYNFTVDYNVGTYWYHSH--------TDGQYEDGMKGLFI---IKDDSFPYDYDEELS 136
Query: 147 FTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKP 206
+++ L K F ++ ++I++N MN + +V+P
Sbjct: 137 LSLSEWYHDLVTDLTKSFM---SVYNPTGAEPIPQNLIVNNT-----MN----LTWEVQP 184
Query: 207 GKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQ 256
TYLLRI+N +F I +H + VVE D + + T+ L I Q
Sbjct: 185 DTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQ 234
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|2Q9O|B Chain B, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|3FU7|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU8|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
pdb|3FU8|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
Length = 559
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 107/475 (22%), Positives = 168/475 (35%), Gaps = 114/475 (24%)
Query: 26 LAEPAFGITRHYEFDI---------------KLQNLNGKFPGPRIVAREGDQL------- 63
++ P G+T+ Y F++ K+ +NG GP IVA GD +
Sbjct: 25 VSTPDTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINN 84
Query: 64 ----------HGIRRLRSGWADGPAYITQCPIQ-TGQSCVYNFTIVGRRGKLWWHAHMTC 112
HGI + + DG +T+CPI G Y + + G W+H+H +
Sbjct: 85 LVTNGTSIHWHGIXQKDTNLHDGANGVTECPIPPKGGQRTYRWR-ARQYGTSWYHSHFSA 143
Query: 113 LPLWESAGEWFNGGPKAIINQALQTGGGPNASDAFTINGLSGSLYNRSAKEFQV------ 166
Q G G ING + Y+ F +
Sbjct: 144 -----------------------QYGNG--VVGTIQINGPASLPYDIDLGVFPITDYYYR 178
Query: 167 --EDMIFEEKNEGRALVDVILSNQEYIG-EMNAGRDMILKVKPGKTYLLRIINAALNDEL 223
+D++ +N D +L N + G+ + + PGK + LRI+N + +
Sbjct: 179 AADDLVHFTQNNAPPFSDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHF 238
Query: 224 FFSIANHTLKVVEADVVYVKPFETETLLIAPGQTT---------------NGTFDNSTVA 268
S+ NHT+ V+ AD+V V ++L +A GQ N TF
Sbjct: 239 QVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAAC 298
Query: 269 GILEYERPPNFHHSSNSIKKLPLFK---PILHALKDISFATCFTSKLRSLASTQFPANVP 325
G P H + + LP + P+ H D T +R + VP
Sbjct: 299 GGSLNPHPAAIFHYAGAPGGLPTDEGTPPVDHQCLD-------TLDVRPV--------VP 343
Query: 326 QNVDRRFFFTVGLGTSPCQTSVNNISFVMPTTALFQAHFIGKPNGVYTPDFPTSPLIPFN 385
++V F T P ++ + T L F+ K NG P+I +
Sbjct: 344 RSVPVNSFVKRPDNTLP-------VALDLTGTPL----FVWKVNGSDINVDWGKPIIDYI 392
Query: 386 YTGNPPNNTMVSXXXXXXXXXXXXXXXXIMQDTSILGTESHPLHLHGFNFFVIGQ 440
TGN + VS I D + HP+HLHG +F V+G+
Sbjct: 393 LTGN--TSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGR 445
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|B Chain B, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|C Chain C, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|D Chain D, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
Length = 604
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 41/245 (16%)
Query: 46 LNGKFPGPRIVAREGDQL-----------------HGIRRLRSGWADGPAYITQCPIQ-T 87
+N K GP I A GD + HG+R+L + + DG +T+CPI
Sbjct: 101 VNDKIIGPTIRANWGDNIEVTVINNLKTNGTSMHWHGLRQLGNVFNDGANGVTECPIPPK 160
Query: 88 GQSCVYNFTIVGRRGKLWWHAHMTCLPLWESAGEWFNGGPKAIINQALQTGGGPNASDAF 147
G Y F + G W+H+H + ++ NG + +Q G AS +
Sbjct: 161 GGRKTYKFRAT-QYGTSWYHSHFSA--------QYGNG-----VVGTIQIDGP--ASLPY 204
Query: 148 TINGLSGSL---YNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILKV 204
I+ L Y RSA E + F + N +V+ + E AG+ + +
Sbjct: 205 DIDLGVFPLMDYYYRSADEL----VHFTQSNGAPPSDNVLFNGTARHPETGAGQWYNVTL 260
Query: 205 KPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGTFDN 264
PGK + LRIIN + ++ S+ H + V+ D+V V F +L +A GQ + T D
Sbjct: 261 TPGKRHRLRIINTSTDNHFQVSLVGHNMTVIATDMVPVNAFTVSSLFLAVGQRYDVTIDA 320
Query: 265 STVAG 269
++ G
Sbjct: 321 NSPVG 325
>pdb|3G5W|A Chain A, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|B Chain B, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|C Chain C, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|D Chain D, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|E Chain E, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|F Chain F, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
Length = 318
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 82/242 (33%), Gaps = 65/242 (26%)
Query: 46 LNGKFPGPRIVAREGDQL----------------HGIRRLRSGWADGPAYITQCPIQTGQ 89
NG+ P P I EGD + HG+ + + +DG + TQ I+ G
Sbjct: 27 FNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQHAIEPGD 86
Query: 90 SCVYNFTIVGRRGKLWWHAHMTCLPLWESAGEWFNGGPKAIINQALQTGGGPNASDAFTI 149
+ Y F G +W+H H+ N ++ T+
Sbjct: 87 TFTYKFK-AEPAGTMWYHCHV-------------------------------NVNEHVTM 114
Query: 150 NGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMI-------- 201
G+ G L +E + K+ L D + S GE D+
Sbjct: 115 RGMWGPLIVEPKNPLPIEKTV--TKDYILMLSDWVSSWANKPGEGGIPGDVFDYYTINAK 172
Query: 202 -------LKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAP 254
++VK G LR+I A + + + + + KP + +T+LI P
Sbjct: 173 SFPETQPIRVKKGDVIRLRLIGAGDHVHAIHTHGHISQIAFKDGFPLDKPIKGDTVLIGP 232
Query: 255 GQ 256
G+
Sbjct: 233 GE 234
>pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27
pdb|2XUW|A Chain A, Crystal Structure Of Apolaccase From Thermus Thermophilus
Hb27
pdb|2XVB|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 5 Min. In 5 Mm Hgcl2 At 278 K.
pdb|4AI7|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 2 H In 5 Mm Hgcl2 At 278 K.
pdb|2YAE|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27(0.0-12.5 Percent Dose)
pdb|2YAF|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (12.5-25.0 Percent Dose)
pdb|2YAH|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (25.0-37.5 Percent Dose)
pdb|2YAM|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (37.5-50.0 Percent Dose)
pdb|2YAO|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (50.0-62.5 Percent Dose)
pdb|2YAP|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (62.5-75.0 Percent Dose)
pdb|2YAQ|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (75.0-87.5 Percent Dose)
pdb|2YAR|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (87.5-100.0 Percent Dose)
Length = 439
Score = 34.7 bits (78), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 20/177 (11%)
Query: 85 IQTGQSCVYNFTIVGR-RGKLWWHAHMTCLPLWESAGEWFNGGPKAIINQALQTGGGPNA 143
I G+S Y FT+ G W+H H+ A + F G A++ ++ P
Sbjct: 89 IPPGESWTYEFTVPKELAGTFWYHPHLHG----RVAPQLFAGLLGALVVES-SLDAIPEL 143
Query: 144 SDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILK 203
+A + L + + M + EG D++L N A R ++
Sbjct: 144 REAEEHLLVLKDLALQGGRPAPHTPMDWMNGKEG----DLVLVN-------GALRPTLVA 192
Query: 204 VKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVK-PFETETLLIAPGQTTN 259
K T LR++NA+ ++ +H L ++ AD +++ P E LL+APG+
Sbjct: 193 QK--ATLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAE 247
>pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A
Metallo-Oxidase
Length = 481
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 52/139 (37%), Gaps = 33/139 (23%)
Query: 47 NGKFPGPRIVAREGDQLHGI--RRLRSG----WADGPAYITQ-----CPIQTGQSCVYNF 95
NG P P+I EGD+L + +L+ W P Q PI G+ +Y F
Sbjct: 76 NGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPPDQDGSPHDPILAGEERIYRF 135
Query: 96 TI-VGRRGKLWWHAHMTCLPLWESAGEWFNGGPKAIINQALQTGGGPNASDAFTINGLSG 154
I G W+H H P + ++ + F G + AF I
Sbjct: 136 EIPQDSAGTYWYHPH----PHYTASKQVFMG-----------------LAGAFVIKAKKD 174
Query: 155 SLYNRSAKEFQVEDMIFEE 173
+L + K+ + D+ +E
Sbjct: 175 ALSHLKEKDLMISDLRLDE 193
>pdb|3GDC|A Chain A, Crystal Structure Of Multicopper Oxidase
pdb|3GDC|B Chain B, Crystal Structure Of Multicopper Oxidase
pdb|3GDC|C Chain C, Crystal Structure Of Multicopper Oxidase
Length = 288
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 34/88 (38%), Gaps = 20/88 (22%)
Query: 42 KLQNLNGKFPGPRIVAREGDQL----------------HGIRRLRSGWADGPAYITQCPI 85
K + NG+ PGP + AREGD L HG+ R DG I I
Sbjct: 55 KGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVHRAT---MDGTPGIGAGSI 111
Query: 86 QTGQSCVYNFTIVGRRGKLWWHAHMTCL 113
GQS Y F G +H H + L
Sbjct: 112 APGQSFTYEFDAT-PFGTHLYHCHQSPL 138
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,974,750
Number of Sequences: 62578
Number of extensions: 587375
Number of successful extensions: 1092
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1002
Number of HSP's gapped (non-prelim): 76
length of query: 448
length of database: 14,973,337
effective HSP length: 102
effective length of query: 346
effective length of database: 8,590,381
effective search space: 2972271826
effective search space used: 2972271826
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)