Query 047904
Match_columns 448
No_of_seqs 203 out of 1831
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 07:12:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047904.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047904hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 4.2E-65 1.5E-69 541.0 36.5 379 32-447 1-466 (552)
2 3sqr_A Laccase; multicopper ox 100.0 5.1E-65 1.7E-69 538.3 35.4 340 31-447 64-484 (580)
3 3pxl_A Laccase; 4-copper prote 100.0 7.5E-62 2.6E-66 507.9 34.0 325 34-441 3-410 (499)
4 3t6v_A Laccase; beta barrel, o 100.0 1.8E-61 6.1E-66 504.9 33.6 326 34-441 4-412 (495)
5 1zpu_A Iron transport multicop 100.0 5.8E-61 2E-65 506.4 35.9 324 33-443 1-409 (534)
6 1v10_A Laccase; multicopper bl 100.0 1.3E-60 4.5E-65 502.8 32.4 343 20-444 9-435 (521)
7 2q9o_A Laccase-1; multicopper 100.0 1.7E-56 5.8E-61 475.0 36.8 340 29-446 28-460 (559)
8 1hfu_A Laccase 1; oxidoreducta 100.0 6.7E-57 2.3E-61 472.9 31.3 323 35-444 5-414 (503)
9 2uxt_A Protein SUFI, SUFI; oxi 100.0 3.3E-50 1.1E-54 416.5 20.9 176 33-261 17-255 (451)
10 2xu9_A Laccase; oxidoreductase 100.0 6.1E-49 2.1E-53 406.1 24.1 308 31-445 13-389 (439)
11 3abg_A Bilirubin oxidase; clea 100.0 2.9E-48 1E-52 409.0 23.6 199 34-261 36-280 (534)
12 3aw5_A Multicopper oxidase; be 100.0 6.8E-49 2.3E-53 406.2 16.7 175 34-262 20-247 (448)
13 3zx1_A Oxidoreductase, putativ 100.0 1E-47 3.5E-52 398.9 24.2 186 25-262 41-283 (481)
14 2wsd_A Spore coat protein A; o 100.0 1.1E-47 3.7E-52 403.9 22.4 191 33-261 24-303 (513)
15 3gyr_A PHS, phenoxazinone synt 100.0 7.9E-46 2.7E-50 398.4 24.1 199 32-260 30-338 (612)
16 3od3_A Blue copper oxidase CUE 100.0 4.2E-45 1.4E-49 379.3 25.2 203 33-261 16-256 (488)
17 2g23_A PHS, phenoxazinone synt 100.0 3E-43 1E-47 374.2 24.0 194 32-260 30-338 (612)
18 3g5w_A Multicopper oxidase typ 100.0 3.6E-38 1.2E-42 312.0 17.7 181 33-261 1-239 (318)
19 2zwn_A Two-domain type laccase 100.0 2E-37 6.9E-42 309.6 20.4 181 33-261 2-240 (339)
20 2j5w_A Ceruloplasmin, ferroxid 100.0 1.2E-36 4.2E-41 343.5 22.3 219 13-277 1-358 (1065)
21 1kbv_A ANIA, major outer membr 100.0 9.2E-34 3.1E-38 281.7 16.9 200 30-277 34-309 (327)
22 3gdc_A Multicopper oxidase; be 100.0 2.8E-32 9.5E-37 266.4 16.4 173 31-263 31-259 (288)
23 3kw8_A Laccase, putative coppe 100.0 3E-31 1E-35 257.5 16.1 184 28-262 1-232 (276)
24 2zoo_A Probable nitrite reduct 100.0 5.5E-31 1.9E-35 272.3 17.2 201 30-278 24-300 (442)
25 3tas_A Small laccase, multi-co 100.0 7.5E-31 2.6E-35 259.1 15.0 185 27-261 6-237 (313)
26 3t9w_A Small laccase, multi-co 100.0 1.4E-30 4.9E-35 255.3 15.1 190 27-260 22-252 (299)
27 1mzy_A Copper-containing nitri 100.0 2.5E-29 8.5E-34 250.5 17.2 183 29-260 27-285 (333)
28 1oe1_A Dissimilatory copper-co 100.0 2.7E-29 9.3E-34 250.5 16.8 194 31-260 29-285 (336)
29 3cg8_A Laccase; oxidoreductase 100.0 1.1E-27 3.9E-32 239.0 17.4 187 31-262 45-273 (343)
30 2bw4_A Copper-containing nitri 100.0 1.3E-27 4.6E-32 238.7 17.6 184 29-261 33-292 (340)
31 1sdd_B Coagulation factor V; c 99.9 1.2E-27 4.3E-32 258.2 13.7 165 46-261 62-296 (647)
32 1sdd_A Coagulation factor V; c 99.9 1.2E-28 3.9E-33 242.8 4.6 198 31-263 35-271 (306)
33 2dv6_A Nitrite reductase; elec 99.9 8.1E-27 2.8E-31 241.4 16.5 207 30-275 24-260 (447)
34 2dv6_A Nitrite reductase; elec 99.9 9.1E-26 3.1E-30 233.5 18.6 191 31-262 160-403 (447)
35 2r7e_B Coagulation factor VIII 99.9 2.1E-26 7.3E-31 251.0 6.8 194 49-261 195-425 (770)
36 2j5w_A Ceruloplasmin, ferroxid 99.9 1.2E-25 4.1E-30 253.9 5.0 187 46-261 623-858 (1065)
37 2r7e_A Coagulation factor VIII 99.9 4E-25 1.4E-29 240.5 5.9 192 47-260 69-297 (742)
38 2r7e_A Coagulation factor VIII 99.9 3.9E-24 1.3E-28 232.8 2.9 192 48-262 447-681 (742)
39 2zwn_A Two-domain type laccase 99.4 1.5E-13 5.2E-18 136.7 8.3 82 180-276 22-106 (339)
40 3cg8_A Laccase; oxidoreductase 99.3 9.5E-13 3.2E-17 131.0 5.0 158 200-441 77-246 (343)
41 3gdc_A Multicopper oxidase; be 99.2 8.8E-12 3E-16 121.1 7.1 177 180-442 53-235 (288)
42 3g5w_A Multicopper oxidase typ 99.2 6.3E-12 2.2E-16 123.8 6.1 83 181-276 22-105 (318)
43 3kw8_A Laccase, putative coppe 99.2 1.5E-11 5.1E-16 118.8 5.3 168 183-441 26-205 (276)
44 3t9w_A Small laccase, multi-co 99.1 1.6E-10 5.5E-15 112.8 8.6 161 199-443 57-229 (299)
45 3tas_A Small laccase, multi-co 98.9 8.2E-10 2.8E-14 108.5 6.8 161 198-442 40-212 (313)
46 3cvb_A Plastocyanin; cupredoxi 98.9 2.4E-10 8.3E-15 93.5 1.8 63 48-111 14-92 (105)
47 1kbv_A ANIA, major outer membr 98.9 2.3E-09 7.8E-14 105.9 7.4 79 180-276 57-136 (327)
48 1iby_A Nitrosocyanin; RED copp 98.8 3.8E-09 1.3E-13 87.6 4.5 58 46-112 31-99 (112)
49 1sdd_A Coagulation factor V; c 98.8 1.1E-09 3.8E-14 107.2 0.7 75 200-276 60-147 (306)
50 2uxt_A Protein SUFI, SUFI; oxi 98.8 1.4E-08 4.7E-13 104.7 8.7 191 46-261 187-406 (451)
51 1sdd_B Coagulation factor V; c 98.7 2.1E-08 7.1E-13 108.0 7.8 78 198-277 67-157 (647)
52 2xu9_A Laccase; oxidoreductase 98.7 9.3E-08 3.2E-12 98.1 12.3 206 46-274 182-423 (439)
53 2ov0_A Amicyanin; beta-sandwic 98.6 5.2E-08 1.8E-12 79.8 6.1 68 35-111 19-95 (105)
54 2cal_A Rusticyanin; iron respi 98.5 1E-07 3.6E-12 83.5 5.8 65 46-113 55-142 (154)
55 2r7e_B Coagulation factor VIII 98.5 2.2E-08 7.5E-13 109.3 1.7 74 198-277 197-279 (770)
56 1v10_A Laccase; multicopper bl 98.5 4.3E-07 1.5E-11 95.2 11.5 72 200-274 397-474 (521)
57 2zoo_A Probable nitrite reduct 98.5 1.6E-07 5.5E-12 96.4 8.0 79 180-276 47-126 (442)
58 1hfu_A Laccase 1; oxidoreducta 98.5 1.4E-06 4.9E-11 90.8 15.2 75 200-274 373-453 (503)
59 2bw4_A Copper-containing nitri 98.5 4.5E-07 1.5E-11 89.8 10.4 81 179-277 57-138 (340)
60 1fwx_A Nitrous oxide reductase 98.4 2.3E-07 7.9E-12 97.6 6.4 56 46-110 506-575 (595)
61 1oe1_A Dissimilatory copper-co 98.2 8.6E-06 3E-10 80.4 11.4 80 180-277 52-132 (336)
62 3t6v_A Laccase; beta barrel, o 98.1 3.9E-05 1.3E-09 79.7 15.9 75 200-274 374-454 (495)
63 2gim_A Plastocyanin; beta shee 98.1 3.9E-06 1.3E-10 68.3 5.4 60 52-111 19-93 (106)
64 1mzy_A Copper-containing nitri 98.0 2.8E-05 9.5E-10 76.6 10.9 81 179-277 50-131 (333)
65 2q9o_A Laccase-1; multicopper 98.0 0.00018 6E-09 75.9 17.0 75 200-274 404-504 (559)
66 1aoz_A Ascorbate oxidase; oxid 97.9 5E-05 1.7E-09 80.0 10.7 85 181-277 22-107 (552)
67 3od3_A Blue copper oxidase CUE 97.8 1.9E-05 6.4E-10 81.8 6.4 74 183-261 379-455 (488)
68 3pxl_A Laccase; 4-copper prote 97.8 5.8E-05 2E-09 78.4 10.0 86 181-277 22-112 (499)
69 3zx1_A Oxidoreductase, putativ 97.7 0.00011 3.8E-09 75.9 9.8 76 183-263 372-452 (481)
70 3c75_A Amicyanin; copper prote 97.7 8.1E-05 2.8E-09 63.2 7.2 68 35-111 46-122 (132)
71 3sqr_A Laccase; multicopper ox 97.6 0.0006 2E-08 72.0 13.2 73 200-277 98-171 (580)
72 1b3i_A PETE protein, protein ( 97.5 5.8E-05 2E-09 60.2 4.0 56 53-111 19-85 (97)
73 2plt_A Plastocyanin; electron 97.5 5.4E-05 1.9E-09 60.4 3.4 57 52-111 17-86 (98)
74 2g23_A PHS, phenoxazinone synt 97.5 0.00018 6.3E-09 76.3 7.8 86 183-274 460-574 (612)
75 3aw5_A Multicopper oxidase; be 97.4 0.00019 6.5E-09 73.6 7.0 74 183-260 325-414 (448)
76 1bxv_A Plastocyanin; copper pr 97.4 9.8E-05 3.4E-09 57.9 3.6 56 49-111 15-79 (91)
77 1byp_A Protein (plastocyanin); 97.4 0.00018 6.1E-09 57.5 5.0 56 53-111 17-87 (99)
78 1plc_A Plastocyanin; electron 97.4 0.00018 6E-09 57.6 4.9 57 52-111 16-87 (99)
79 1kdj_A Plastocyanin; electron 97.4 0.00019 6.4E-09 57.7 5.0 54 52-111 16-90 (102)
80 1pcs_A Plastocyanin; electron 97.3 0.00012 4.3E-09 58.3 3.8 53 52-111 18-86 (98)
81 3ef4_A Pseudoazurin, blue copp 97.2 0.00041 1.4E-08 58.1 5.9 54 52-111 21-82 (124)
82 3tu6_A Pseudoazurin (blue copp 97.2 0.00038 1.3E-08 58.6 5.7 54 52-111 22-83 (127)
83 3erx_A Pseudoazurin; copper pr 97.2 0.00042 1.4E-08 58.0 5.6 54 52-111 20-81 (123)
84 4hci_A Cupredoxin 1; structura 97.1 0.00031 1.1E-08 56.4 3.8 56 47-111 22-88 (100)
85 2aan_A Auracyanin A; cupredoxi 97.0 0.0013 4.5E-08 56.0 6.7 28 84-112 100-127 (139)
86 1iuz_A Plastocyanin; electron 96.9 0.00089 3E-08 53.4 4.9 57 52-111 17-86 (98)
87 3abg_A Bilirubin oxidase; clea 96.9 0.0011 3.6E-08 69.5 6.6 90 183-274 360-458 (534)
88 2wsd_A Spore coat protein A; o 96.9 0.0017 5.9E-08 67.6 7.9 86 183-274 385-493 (513)
89 1zpu_A Iron transport multicop 96.9 0.0035 1.2E-07 65.6 10.1 74 200-274 370-464 (534)
90 1pmy_A Pseudoazurin; electron 96.8 0.0017 5.9E-08 54.2 5.8 54 52-111 20-81 (123)
91 1paz_A Pseudoazurin precursor; 96.8 0.0019 6.5E-08 54.0 5.9 54 52-111 20-81 (123)
92 2ux6_A Pseudoazurin; type-1 co 96.7 0.0019 6.6E-08 53.8 5.6 54 52-111 20-81 (122)
93 1id2_A Amicyanin; beta barrel, 96.7 0.0023 8E-08 51.8 6.0 67 36-111 21-96 (106)
94 1qhq_A Protein (auracyanin); e 96.6 0.0043 1.5E-07 52.8 7.4 27 84-111 99-125 (140)
95 3gyr_A PHS, phenoxazinone synt 96.4 0.011 3.8E-07 62.6 10.3 74 200-274 472-574 (612)
96 3sbq_A Nitrous-oxide reductase 94.1 0.078 2.7E-06 55.1 7.0 55 47-110 552-620 (638)
97 1cuo_A Protein (azurin ISO-2); 93.7 0.081 2.8E-06 44.3 5.3 27 84-110 86-114 (129)
98 2aan_A Auracyanin A; cupredoxi 93.6 0.069 2.4E-06 45.1 4.8 57 200-263 35-112 (139)
99 3cvb_A Plastocyanin; cupredoxi 93.1 0.052 1.8E-06 43.1 2.9 71 199-274 18-88 (105)
100 1iby_A Nitrosocyanin; RED copp 91.3 0.58 2E-05 37.5 7.2 58 199-274 37-94 (112)
101 3ay2_A Lipid modified azurin p 88.4 0.22 7.4E-06 43.6 2.5 27 84-110 125-152 (167)
102 2cua_A Protein (CUA); CUA cent 87.0 0.48 1.6E-05 39.8 3.8 47 54-109 61-117 (135)
103 1pcs_A Plastocyanin; electron 86.1 1.1 3.6E-05 34.9 5.1 56 200-263 19-74 (98)
104 2plt_A Plastocyanin; electron 85.5 1.6 5.3E-05 33.8 5.9 57 200-263 18-74 (98)
105 1bxv_A Plastocyanin; copper pr 84.2 3.3 0.00011 31.3 7.2 49 200-263 19-67 (91)
106 2iaa_C Azurin; quinoprotein, t 81.1 1.2 4.1E-05 37.0 3.6 26 84-110 85-113 (128)
107 1nwp_A Azurin; electron transp 80.8 1.1 3.9E-05 37.2 3.4 26 84-110 86-114 (128)
108 3s8f_B Cytochrome C oxidase su 80.6 1.4 4.7E-05 38.5 4.0 64 35-109 77-150 (168)
109 2ccw_A Azurin II, AZN-2; elect 80.0 1.1 3.8E-05 37.2 3.1 26 84-110 86-114 (129)
110 1kdj_A Plastocyanin; electron 80.0 1.3 4.3E-05 34.7 3.3 54 200-263 17-78 (102)
111 1iuz_A Plastocyanin; electron 78.3 4.4 0.00015 31.3 6.0 58 199-263 17-74 (98)
112 4hci_A Cupredoxin 1; structura 77.6 3.9 0.00013 31.8 5.5 46 200-262 28-73 (100)
113 1b3i_A PETE protein, protein ( 77.4 3.6 0.00012 31.6 5.3 53 200-263 19-73 (97)
114 1nwp_A Azurin; electron transp 76.8 2.7 9.3E-05 34.8 4.5 29 200-228 18-51 (128)
115 2iaa_C Azurin; quinoprotein, t 73.6 3.7 0.00013 33.9 4.6 21 200-220 17-38 (128)
116 2ccw_A Azurin II, AZN-2; elect 71.7 4.1 0.00014 33.7 4.4 21 200-220 18-39 (129)
117 2gim_A Plastocyanin; beta shee 69.1 4.1 0.00014 31.8 3.8 29 402-435 21-49 (106)
118 2ov0_A Amicyanin; beta-sandwic 69.0 5.2 0.00018 31.4 4.4 52 199-263 32-83 (105)
119 1fwx_A Nitrous oxide reductase 65.4 13 0.00045 38.8 7.6 59 199-274 512-572 (595)
120 1qhq_A Protein (auracyanin); e 64.4 4.9 0.00017 33.3 3.5 30 402-432 34-63 (140)
121 3fsa_A Azurin; copper, cupredo 61.7 4.5 0.00015 33.4 2.6 26 84-109 86-113 (125)
122 1id2_A Amicyanin; beta barrel, 56.9 10 0.00035 29.8 4.0 51 200-263 34-84 (106)
123 2cal_A Rusticyanin; iron respi 55.9 9.8 0.00034 32.3 3.9 29 200-228 61-89 (154)
124 3erx_A Pseudoazurin; copper pr 51.3 5.9 0.0002 32.5 1.7 51 199-264 20-70 (123)
125 3c75_A Amicyanin; copper prote 49.6 15 0.00052 30.2 4.0 52 199-263 59-110 (132)
126 1cuo_A Protein (azurin ISO-2); 49.4 12 0.00041 30.8 3.3 21 200-220 18-39 (129)
127 1byp_A Protein (plastocyanin); 44.1 16 0.00054 27.9 3.1 29 402-435 18-46 (99)
128 3fsa_A Azurin; copper, cupredo 43.9 17 0.00059 29.8 3.4 64 200-263 18-98 (125)
129 3ay2_A Lipid modified azurin p 43.2 12 0.00042 32.3 2.5 21 200-220 58-79 (167)
130 2r39_A FIXG-related protein; s 40.4 33 0.0011 27.4 4.6 43 208-260 33-77 (118)
131 3tu6_A Pseudoazurin (blue copp 39.3 11 0.00039 30.9 1.6 51 199-264 22-72 (127)
132 3isy_A Bsupi, intracellular pr 37.2 43 0.0015 27.2 4.7 73 31-110 16-101 (120)
133 1cyx_A CYOA; electron transpor 37.1 23 0.00079 31.7 3.3 47 54-109 42-98 (205)
134 2wtp_A ORF131 protein, CZCE; m 35.3 14 0.00048 30.5 1.5 24 200-223 71-94 (131)
135 2x3c_A Toxic extracellular end 32.7 90 0.0031 30.1 7.1 52 53-108 66-125 (343)
136 1plc_A Plastocyanin; electron 28.8 45 0.0015 25.3 3.5 28 402-434 18-45 (99)
137 1xwv_A DER F II; beta sheets, 27.3 36 0.0012 27.8 2.7 18 81-98 76-93 (129)
138 2cua_A Protein (CUA); CUA cent 26.6 1.2E+02 0.0041 24.8 5.9 32 200-233 60-91 (135)
139 3isy_A Bsupi, intracellular pr 26.5 1.9E+02 0.0064 23.3 6.8 54 206-260 16-82 (120)
140 1nep_A EPV20, BNPC2, epididyma 26.1 36 0.0012 27.8 2.5 25 74-98 71-95 (130)
141 3s8f_B Cytochrome C oxidase su 20.9 1.3E+02 0.0045 25.7 5.2 35 200-236 93-127 (168)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=4.2e-65 Score=541.03 Aligned_cols=379 Identities=27% Similarity=0.454 Sum_probs=278.4
Q ss_pred ceeEEEEEEEEEEe------------eCCcCCCceEEEecCCee-----------------eecccCCCCCCCCCCcccc
Q 047904 32 GITRHYEFDIKLQN------------LNGKFPGPRIVAREGDQL-----------------HGIRRLRSGWADGPAYITQ 82 (448)
Q Consensus 32 ~~~~~~~l~i~~~~------------~NG~~PGP~I~v~~Gd~v-----------------HGl~~~~~~~~DGvp~vtq 82 (448)
+++|+|+|+|++.. |||++|||+|||++||+| ||++|++++||||+|++||
T Consensus 1 ~~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq 80 (552)
T 1aoz_A 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ 80 (552)
T ss_dssp CCEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred CeEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccccc
Confidence 47899999999986 999999999999999999 9999999999999999999
Q ss_pred CCCCCCCeeEEEEEeCCccceeEEeecCCCC-------------C---------ccc---ccCCCccCCHHHHHHHHHhc
Q 047904 83 CPIQTGQSCVYNFTIVGRRGKLWWHAHMTCL-------------P---------LWE---SAGEWFNGGPKAIINQALQT 137 (448)
Q Consensus 83 ~pI~PG~~ftY~f~~~~~~GT~wYH~H~~~~-------------P---------~~e---~~~d~~~~~~~~~~~~~~~~ 137 (448)
|||+||++|+|+|++ +++||||||||...| + ++| +++||++.+..+++......
T Consensus 81 ~~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~ 159 (552)
T 1aoz_A 81 CAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPFHYDGEINLLLSDWWHQSIHKQEVGLSSK 159 (552)
T ss_dssp CCBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSSCCSEEEEEEEEEECSSCHHHHHHHTTSS
T ss_pred CCcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCCCCCccceEEeecccCCCHHHHHhhhhcc
Confidence 999999999999998 899999999999888 1 235 89999999887765433221
Q ss_pred C-CCCCCCccEEecCCCCCCCCCCcccccccccchhcccccccccceeecccccccccCc-----ccceEEEEeCCcEEE
Q 047904 138 G-GGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNA-----GRDMILKVKPGKTYL 211 (448)
Q Consensus 138 g-~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ng~~~~~~~~-----~~~~~i~v~~G~~~R 211 (448)
. .....++.+||||+. .++|+.... ..... ..|+. .+++.++|++||+||
T Consensus 160 ~~~~~~~~~~~liNG~~--~~~c~~~~~------~~~~~----------------~~c~~~~~~~~~~~~~~v~~G~~~R 215 (552)
T 1aoz_A 160 PIRWIGEPQTILLNGRG--QFDCSIAAK------YDSNL----------------EPCKLKGSESCAPYIFHVSPKKTYR 215 (552)
T ss_dssp SCCCCCSCSEEEETTBC--CSSSBTTGG------GCTTS----------------CBCCCCSCSTTSCCCEEECTTCEEE
T ss_pred cccCCCCCCeEEECCcc--ccCcccCcc------ccccc----------------ccccccCCCCCCceEEEEcCCCEEE
Confidence 1 111346899999986 455643110 00000 01221 123589999999999
Q ss_pred EEEEeccCCCeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCcccccc--c-------------------CCcceEEE
Q 047904 212 LRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGT--F-------------------DNSTVAGI 270 (448)
Q Consensus 212 lRliNa~~~~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeRydv~--~-------------------~~~~~~ai 270 (448)
|||||+|+.+.+.|+|+||+|+|||+||.+++|+.++++.|++|||||+. + ....+.||
T Consensus 216 lRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~~~~~~~~~~ai 295 (552)
T 1aoz_A 216 IRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTL 295 (552)
T ss_dssp EEEEECCSSCEEEEEETTCCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEESSCCCSCCEEEE
T ss_pred EEEEcccccceEEEEEcCcEEEEEEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcccCCCCCccEEEE
Confidence 99999999999999999999999999999999999999999999999972 1 11346899
Q ss_pred EEEeCCCCCCCCCCCCCCCCCcCCcCCCCCCccceeeeccccccccCCCCCCCCCCCcceEEEEEEeeCCC--CCccccc
Q 047904 271 LEYERPPNFHHSSNSIKKLPLFKPILHALKDISFATCFTSKLRSLASTQFPANVPQNVDRRFFFTVGLGTS--PCQTSVN 348 (448)
Q Consensus 271 L~Y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~l~~~~~~~--~~~~~iN 348 (448)
|+|.++... ....+.. |..|.+++..... ...++.+..+. +.++|..+++++.+.++++.. ...|+||
T Consensus 296 l~y~~~~~~------~~p~~~~-p~~p~~~~~~~~~--~~~l~~l~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~w~iN 365 (552)
T 1aoz_A 296 LNYLPNSVS------KLPTSPP-PQTPAWDDFDRSK--NFTYRITAAMG-SPKPPVKFNRRIFLLNTQNVINGYVKWAIN 365 (552)
T ss_dssp EEETTSCTT------SCCSSCC-CCCCCTTCHHHHH--HHHTTCCBCTT-CCCCCSSCSEEEEEEEEEEEETTEEEEEET
T ss_pred EEECCCCCC------CCCCCCC-CCCCccccccccc--cccccccccCC-CCCCCCCCcEEEEEEEeeccCCCeEEEEEC
Confidence 999876420 0001111 3444444432211 11244443222 334556788998888765432 3369999
Q ss_pred ceeeecCChhhhhhhhcCCCCCccCCCCCCCCC-ccCCCCCCCCCCCccCCceeEEEeecCCEEEEEEeecCCCC---CC
Q 047904 349 NISFVMPTTALFQAHFIGKPNGVYTPDFPTSPL-IPFNYTGNPPNNTMVSNGTTLVVLTFNTNVELIMQDTSILG---TE 424 (448)
Q Consensus 349 ~~sf~~p~~pll~~~~~~~~~g~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~v~~g~~Vdivi~N~~~~~---~~ 424 (448)
|++|..|..|+|.+.+.+++ |.+..+++..++ ..|+.+. +..+...|.++.++.++.|++|||+|+|.+.+. ..
T Consensus 366 g~s~~~p~~P~L~~~~~~~~-g~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~ 443 (552)
T 1aoz_A 366 DVSLALPPTPYLGAMKYNLL-HAFDQNPPPEVFPEDYDIDT-PPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSE 443 (552)
T ss_dssp TEEECCCSSCHHHHHHTTCT-TSSCCSCCCSCCCTTCCTTS-CCCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCC
T ss_pred CCccCCCCCCHHHHHhhcCc-cccccCCCcccccccccccc-ccccccccccceEEEecCCCEEEEEEeCCcccccccCC
Confidence 99999999999988887665 666655543322 1233221 111234567788999999999999999976433 56
Q ss_pred CCCcccCCCceEEEEecCCCCCC
Q 047904 425 SHPLHLHGFNFFVIGQGFGNFNP 447 (448)
Q Consensus 425 ~HP~HLHGh~F~Vl~~G~G~~~~ 447 (448)
.||||||||+||||++|.|.|++
T Consensus 444 ~HP~HLHGh~F~Vl~~g~G~~~~ 466 (552)
T 1aoz_A 444 THPWHLHGHDFWVLGYGDGKFSA 466 (552)
T ss_dssp CEEEEETTCCEEEEEEEESSCCG
T ss_pred CCCEEEcCCceEEEecccCccCc
Confidence 79999999999999999999863
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=5.1e-65 Score=538.33 Aligned_cols=340 Identities=29% Similarity=0.437 Sum_probs=255.5
Q ss_pred eceeEEEEEEEEEEe------------eCCcCCCceEEEecCCee-----------------eecccCCCCCCCCCCccc
Q 047904 31 FGITRHYEFDIKLQN------------LNGKFPGPRIVAREGDQL-----------------HGIRRLRSGWADGPAYIT 81 (448)
Q Consensus 31 ~~~~~~~~l~i~~~~------------~NG~~PGP~I~v~~Gd~v-----------------HGl~~~~~~~~DGvp~vt 81 (448)
.+++|+|+|+|++.+ |||++|||+|++++||+| ||++|++++||||+|+||
T Consensus 64 ~~~~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vT 143 (580)
T 3sqr_A 64 TGVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVT 143 (580)
T ss_dssp CCCEEEEEEEEEEEEECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTT
T ss_pred CceEEEEEEEEEEEEecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCccc
Confidence 578999999999986 999999999999999999 999999999999999999
Q ss_pred cCCCCCCCeeEEEEEeCCccceeEEeecCCCC-------------C-----ccc----ccCCCccCCHHHHHHHHHhcCC
Q 047904 82 QCPIQTGQSCVYNFTIVGRRGKLWWHAHMTCL-------------P-----LWE----SAGEWFNGGPKAIINQALQTGG 139 (448)
Q Consensus 82 q~pI~PG~~ftY~f~~~~~~GT~wYH~H~~~~-------------P-----~~e----~~~d~~~~~~~~~~~~~~~~g~ 139 (448)
||||+||++|+|+|++ .|+||||||||...| | |.| +++||++.+..++.......
T Consensus 144 q~pI~PG~sftY~f~~-~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~~~yD~d~~~l~l~Dw~~~~~~~~~~~~~~~-- 220 (580)
T 3sqr_A 144 QCPIAPGDTLTYKFQV-TQYGTTWYHSHFSLQYGDGLFGPLIINGPATADYDEDVGVIFLQDWAHESVFEIWDTARLG-- 220 (580)
T ss_dssp BCCBCTTCEEEEEEEC-CCCEEEEEEECSTTGGGGTCEEEEEEECCCSSCCSEEEEEEEEEEECSSCHHHHHHHHTTS--
T ss_pred cCCCCCCCeEEEEEEC-CCCcceEEeecccccccCcCEEEEEeeCcccCCCCccceEEEEEEEecCCHHHHHHHHhcc--
Confidence 9999999999999998 799999999999877 2 233 88999999988876665433
Q ss_pred CCCCCccEEecCCCCCCCCCCcccccccccchhcccccccccceeecccccccccC-cccceEEEEeCCcEEEEEEEecc
Q 047904 140 GPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMN-AGRDMILKVKPGKTYLLRIINAA 218 (448)
Q Consensus 140 ~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ng~~~~~~~-~~~~~~i~v~~G~~~RlRliNa~ 218 (448)
.+.++|++||||++ .++|+..+. ..|. ....+.++|++||+|||||||+|
T Consensus 221 ~~~~~d~~liNG~~--~~~c~~~~~---------------------------~~~~~~~~~~~~~v~~G~~yRlRlINa~ 271 (580)
T 3sqr_A 221 APPALENTLMNGTN--TFDCSASTD---------------------------PNCVGGGKKFELTFVEGTKYRLRLINVG 271 (580)
T ss_dssp CCCCBSEEEETTBC--CCCCTTCCC---------------------------TTBCCCCCCCEEECCTTCEEEEEEEECC
T ss_pred CCCCCceEEECCcc--cCCCccccc---------------------------cccccCCCceeEEEcCCCEEEEEEEecc
Confidence 24578999999985 456653210 0122 12458999999999999999999
Q ss_pred CCCeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCcccccc---------------c--------CCcceEEEEEEeC
Q 047904 219 LNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGT---------------F--------DNSTVAGILEYER 275 (448)
Q Consensus 219 ~~~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeRydv~---------------~--------~~~~~~aiL~Y~~ 275 (448)
....+.|+|+||+|+|||+||.+++|+.+++|.|++||||||. . ....+.|||+|.+
T Consensus 272 ~~~~~~~~i~gh~~~VIa~DG~~v~P~~~~~l~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~ 351 (580)
T 3sqr_A 272 IDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDS 351 (580)
T ss_dssp SSCCEEEEETTCCEEEEEETTEEEEEEEESSEEECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESST
T ss_pred CCceeeEEeCCceEEEEEeCCccCCceEeeEEEEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECC
Confidence 9999999999999999999999999999999999999999961 0 0125799999976
Q ss_pred CCCCCCCCCCCCCCCCcCCcCCCCCCcc-ceeeeccccccccCCCCCCCCCCCcceEEEEEEeeCCCCCcccccceeeec
Q 047904 276 PPNFHHSSNSIKKLPLFKPILHALKDIS-FATCFTSKLRSLASTQFPANVPQNVDRRFFFTVGLGTSPCQTSVNNISFVM 354 (448)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~p~~p~~~~~~-~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~l~~~~~~~~~~~~iN~~sf~~ 354 (448)
+.. .. |..+.+.... +......+|+++. +.++|...+.++.+.++ .+..+.|+|||++|..
T Consensus 352 ~~~---------~~----P~~~~~~~~~~~~~~~~~~L~P~~----~~~~~~~~~~~~~l~~~-~~~~~~w~iN~~s~~~ 413 (580)
T 3sqr_A 352 SSI---------AN----PTSVGTTPRGTCEDEPVASLVPHL----ALDVGGYSLVDEQVSSA-FTNYFTWTINSSSLLL 413 (580)
T ss_dssp TCC---------CC----CCCCCCCCCCCSCCSCGGGCCBSS----CCBCCSEEEEEEEEEEE-ESSSEEEEETTBCCCC
T ss_pred CCC---------CC----CCCCCCCccchhhcccccccccCC----CCCCCCccceEEEEEec-cCCceeEEECCEeccc
Confidence 532 11 2222222211 1111113444432 22334445566656554 2334479999999974
Q ss_pred -CChhhhhhhhcCCCCCccCCCCCCCCCccCCCCCCCCCCCccCCceeEEEe----ecCCEEEEEEeecCCCCCCCCCcc
Q 047904 355 -PTTALFQAHFIGKPNGVYTPDFPTSPLIPFNYTGNPPNNTMVSNGTTLVVL----TFNTNVELIMQDTSILGTESHPLH 429 (448)
Q Consensus 355 -p~~pll~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v----~~g~~Vdivi~N~~~~~~~~HP~H 429 (448)
+..|+|.+.+.+ . .+|+ ...+++.+ +.|++|||||+|.... .+.||||
T Consensus 414 ~~~~P~L~~~~~g----~--~~~~--------------------~~~~~~~~~~~~~~~~~VeiVi~n~~~~-~~~HP~H 466 (580)
T 3sqr_A 414 DWSSPTTLKIFNN----E--TIFP--------------------TEYNVVALEQTNANEEWVVYVIEDLTGF-GIWHPIH 466 (580)
T ss_dssp CTTSCHHHHHHTT----C--CCCC--------------------GGGCEEEECC----CCEEEEEEEECSSS-CCCEEEE
T ss_pred CCCCCchhhhhcC----C--ccCC--------------------CCcceeecccccCCCcEEEEEEeCCCcc-ccceeeE
Confidence 577877665432 1 1221 12334555 4699999999997522 4799999
Q ss_pred cCCCceEEEEecCCCCCC
Q 047904 430 LHGFNFFVIGQGFGNFNP 447 (448)
Q Consensus 430 LHGh~F~Vl~~G~G~~~~ 447 (448)
||||+||||++|.|.|++
T Consensus 467 LHGh~F~vv~~g~G~f~~ 484 (580)
T 3sqr_A 467 LHGHDFFIVAQETDVFNS 484 (580)
T ss_dssp ESSCCEEEEEEESSCCCT
T ss_pred ecCceEEEEecCCCccCc
Confidence 999999999999999974
No 3
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=7.5e-62 Score=507.93 Aligned_cols=325 Identities=28% Similarity=0.507 Sum_probs=244.9
Q ss_pred eEEEEEEEEEEe------------eCCcCCCceEEEecCCee---------------------eecccCCCCCCCCCCcc
Q 047904 34 TRHYEFDIKLQN------------LNGKFPGPRIVAREGDQL---------------------HGIRRLRSGWADGPAYI 80 (448)
Q Consensus 34 ~~~~~l~i~~~~------------~NG~~PGP~I~v~~Gd~v---------------------HGl~~~~~~~~DGvp~v 80 (448)
-..|+|+|++.. |||++|||+||+++||+| ||++|++++||||+|++
T Consensus 3 ~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~v 82 (499)
T 3pxl_A 3 GPVADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFI 82 (499)
T ss_dssp CSEEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTT
T ss_pred cceEEEEEEEEEEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCcc
Confidence 367999999987 999999999999999998 99999999999999999
Q ss_pred ccCCCCCCCeeEEEEEeCCccceeEEeecCCCC-------------C-----------ccc---ccCCCccCCHHHHHHH
Q 047904 81 TQCPIQTGQSCVYNFTIVGRRGKLWWHAHMTCL-------------P-----------LWE---SAGEWFNGGPKAIINQ 133 (448)
Q Consensus 81 tq~pI~PG~~ftY~f~~~~~~GT~wYH~H~~~~-------------P-----------~~e---~~~d~~~~~~~~~~~~ 133 (448)
|||||+||++|+|+|++++++||||||||.+.| | ++| +++||++....+
T Consensus 83 tq~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~---- 158 (499)
T 3pxl_A 83 NQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKL---- 158 (499)
T ss_dssp TBCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT----
T ss_pred ccCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCcccc----
Confidence 999999999999999997899999999999877 1 123 789999876432
Q ss_pred HHhcCCCCCCCccEEecCCCCCCCCCCcccccccccchhcccccccccceeecccccccccCcccceEEEEeCCcEEEEE
Q 047904 134 ALQTGGGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLR 213 (448)
Q Consensus 134 ~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlR 213 (448)
.+..+..+|++||||++. +.|.. ....+.++|++||+||||
T Consensus 159 ---~~~~p~~~d~~liNG~~~--~~~~~----------------------------------~~~~~~~~v~~G~~~RlR 199 (499)
T 3pxl_A 159 ---GPRFPGGADATLINGKGR--APSDS----------------------------------VAELSVIKVTKGKRYRFR 199 (499)
T ss_dssp ---SCSSCSSCSEEEETTBCC--CTTCT----------------------------------TCCCCEEEECTTCEEEEE
T ss_pred ---ccCCCCCCcEEEECCCCc--CCCCC----------------------------------CCCcceEEEcCCCEEEEE
Confidence 223345789999999852 22211 113488999999999999
Q ss_pred EEeccCCCeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCccccccc----------------------CCcceEEEE
Q 047904 214 IINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGTF----------------------DNSTVAGIL 271 (448)
Q Consensus 214 liNa~~~~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeRydv~~----------------------~~~~~~aiL 271 (448)
|||+|..+.+.|+|+||+|+|||+||.+++|+.+++|.|++|||||+.+ ......|||
T Consensus 200 liNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail 279 (499)
T 3pxl_A 200 LVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAIL 279 (499)
T ss_dssp EEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEE
T ss_pred EEecCCCeeEEEEECCCeEEEEEECCcccCceEeeeEEECCCcEEEEEEECCCCCceEEEEEecccCccccCCCceEEEE
Confidence 9999999999999999999999999999999999999999999999711 011247999
Q ss_pred EEeCCCCCCCCCCCCCCCCCcCCcCCCCCCccceeeeccccccccCCCCCC-CCCCCcceEEEEEEeeCCCCCcccccce
Q 047904 272 EYERPPNFHHSSNSIKKLPLFKPILHALKDISFATCFTSKLRSLASTQFPA-NVPQNVDRRFFFTVGLGTSPCQTSVNNI 350 (448)
Q Consensus 272 ~Y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~-~~p~~~d~~~~l~~~~~~~~~~~~iN~~ 350 (448)
+|.++... . |..+..... ..+.+.+|+++.....|. +.+..+|+++.+.+++... .|+|||+
T Consensus 280 ~Y~~~~~~---------~----p~~~~~~~~--~~~~~~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~~~~--~w~iNg~ 342 (499)
T 3pxl_A 280 RYDGAPAV---------E----PTTNQTTSV--KPLNEVDLHPLVSTPVPGAPSSGGVDKAINMAFNFNGS--NFFINGA 342 (499)
T ss_dssp EETTSCSS---------C----CCCCCCCCS--SBCCGGGCCBSSCCCCSSCSSTTCSSEEEECCEEECSS--CEEETTB
T ss_pred EeCCCCCC---------C----CCCCCCCCC--cccccccccccccccCCCcccCCCCcEEEEEEEEecCc--EEEEcCE
Confidence 99876421 1 111111110 112234666664332222 2334678888877766433 6999999
Q ss_pred eeecCChhhhhhhhcCCCCCccCCCCCCCCCccCCCCCCCCCCCccCCceeEEEeecCCEEEEEEeecCCCCCCCCCccc
Q 047904 351 SFVMPTTALFQAHFIGKPNGVYTPDFPTSPLIPFNYTGNPPNNTMVSNGTTLVVLTFNTNVELIMQDTSILGTESHPLHL 430 (448)
Q Consensus 351 sf~~p~~pll~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~Vdivi~N~~~~~~~~HP~HL 430 (448)
+|..|..|+|.+.+.+ .... . .......++.++.|++|||+|+|........|||||
T Consensus 343 s~~~~~~P~L~~~~~g----~~~~------~-------------~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HL 399 (499)
T 3pxl_A 343 SFVPPTVPVLLQILSG----AQTA------Q-------------DLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHL 399 (499)
T ss_dssp CCCCCSSCHHHHHHTT----CCST------T-------------TSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEE
T ss_pred ecCCCCCchhhhhhcC----Cccc------c-------------ccCCCceeEEecCCCEEEEEEecCcccCCCCcccee
Confidence 9999988877765532 1110 0 001234588999999999999953223367899999
Q ss_pred CCCceEEEEec
Q 047904 431 HGFNFFVIGQG 441 (448)
Q Consensus 431 HGh~F~Vl~~G 441 (448)
|||+||||+++
T Consensus 400 HGh~F~Vl~~~ 410 (499)
T 3pxl_A 400 HGHTFAVVRSA 410 (499)
T ss_dssp TTCCEEEEECT
T ss_pred cCCcEEEEecc
Confidence 99999999874
No 4
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=1.8e-61 Score=504.94 Aligned_cols=326 Identities=27% Similarity=0.476 Sum_probs=243.6
Q ss_pred eEEEEEEEEEEe------------eCCcCCCceEEEecCCee---------------------eecccCCCCCCCCCCcc
Q 047904 34 TRHYEFDIKLQN------------LNGKFPGPRIVAREGDQL---------------------HGIRRLRSGWADGPAYI 80 (448)
Q Consensus 34 ~~~~~l~i~~~~------------~NG~~PGP~I~v~~Gd~v---------------------HGl~~~~~~~~DGvp~v 80 (448)
-+.|+|+|++.+ |||++|||+||+++||+| ||++|++++||||+|++
T Consensus 4 ~~~~~l~i~~~~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~v 83 (495)
T 3t6v_A 4 GPVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFI 83 (495)
T ss_dssp CSEEEEEEEEEEECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTT
T ss_pred CCeEEEEEEEEEEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCcc
Confidence 367999999987 999999999999999998 99999999999999999
Q ss_pred ccCCCCCCCeeEEEEEeCCccceeEEeecCCCC-------------C-----------ccc---ccCCCccCCHHHHHHH
Q 047904 81 TQCPIQTGQSCVYNFTIVGRRGKLWWHAHMTCL-------------P-----------LWE---SAGEWFNGGPKAIINQ 133 (448)
Q Consensus 81 tq~pI~PG~~ftY~f~~~~~~GT~wYH~H~~~~-------------P-----------~~e---~~~d~~~~~~~~~~~~ 133 (448)
|||||+||++|+|+|++++++||||||||.+.| | ++| +++||++....++
T Consensus 84 tq~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~--- 160 (495)
T 3t6v_A 84 TQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM--- 160 (495)
T ss_dssp TBCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS---
T ss_pred ccCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh---
Confidence 999999999999999987899999999999877 1 123 7899999876432
Q ss_pred HHhcCCCCCCCccEEecCCCCCCCCCCcccccccccchhcccccccccceeecccccccccCcccceEEEEeCCcEEEEE
Q 047904 134 ALQTGGGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLR 213 (448)
Q Consensus 134 ~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlR 213 (448)
.+..+.++|++||||++. +.|... ..+.+.++|++||+||||
T Consensus 161 ---~~~~p~~~d~~liNG~g~--~~~~~~---------------------------------~~~~~~~~v~~G~~~RlR 202 (495)
T 3t6v_A 161 ---GAGGAITADSTLIDGLGR--THVNVA---------------------------------AVPLSVITVEVGKRYRMR 202 (495)
T ss_dssp ---CSSSCCCCSEEEETTBCC--BSSSCC---------------------------------CCCCCEEEECTTCEEEEE
T ss_pred ---ccCCCCCCcEEEECCcCc--CCCCcc---------------------------------cCCceEEEEcCCCEEEEE
Confidence 223345789999999852 222110 013478999999999999
Q ss_pred EEeccCCCeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCccccccc----------------------CCcceEEEE
Q 047904 214 IINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGTF----------------------DNSTVAGIL 271 (448)
Q Consensus 214 liNa~~~~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeRydv~~----------------------~~~~~~aiL 271 (448)
|||+|+.+.+.|+|+||+|+|||+||.+++|+.+++|.|++|||||+.+ ......|||
T Consensus 203 liN~~~~~~~~~~i~gh~~~via~DG~~~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail 282 (495)
T 3t6v_A 203 LVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQRYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAIL 282 (495)
T ss_dssp EEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEE
T ss_pred EEecCCCeeEEEEECCCeEEEEEeCCcccCCEEeeeEEEcCceEEEEEEECCCCCceEEEEEecccCccccCCCceEEEE
Confidence 9999999999999999999999999999999999999999999999721 011246999
Q ss_pred EEeCCCCCCCCCCCCCCCCCcCCcCCCCCCccceeeeccccccccCCCCCC-CCCCCcceEEEEEEeeCCCCCcccccce
Q 047904 272 EYERPPNFHHSSNSIKKLPLFKPILHALKDISFATCFTSKLRSLASTQFPA-NVPQNVDRRFFFTVGLGTSPCQTSVNNI 350 (448)
Q Consensus 272 ~Y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~-~~p~~~d~~~~l~~~~~~~~~~~~iN~~ 350 (448)
+|.++.. ..| ..+.... ....+.+.+|+++.....|. +.+..+|+++.+.+++.+. .|+|||+
T Consensus 283 ~Y~~~~~---------~~p----~~~~~~~-~~~~~~~~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~~~~--~w~iNg~ 346 (495)
T 3t6v_A 283 RYDGATT---------ADP----VTVASTV-HTKCLIETDLHPLSRNGVPGNPHQGGADCNLNLSLGFACG--NFVINGV 346 (495)
T ss_dssp EETTSCS---------SCC----CCCCCSS-CSSBCCGGGCCBSSCCCCSSCSSTTCSSEEEECCEEEETT--EEEETTB
T ss_pred EECCCCC---------CCC----CCCCCCC-CccccccccccccccccCCCccCCCCCcEEEEEEEEecCc--EEEEcCE
Confidence 9986542 111 1111100 01112234566664332222 1234578888777765433 6999999
Q ss_pred eeecCChhhhhhhhcCCCCCccCCCCCCCCCccCCCCCCCCCCCccCCceeEEEeecCCEEEEEEeecCCCCCCCCCccc
Q 047904 351 SFVMPTTALFQAHFIGKPNGVYTPDFPTSPLIPFNYTGNPPNNTMVSNGTTLVVLTFNTNVELIMQDTSILGTESHPLHL 430 (448)
Q Consensus 351 sf~~p~~pll~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~Vdivi~N~~~~~~~~HP~HL 430 (448)
+|..|..|+|.+.+. |.... . .......++.++.|++|||+|+|. .....|||||
T Consensus 347 s~~~~~~P~L~~~~~----g~~~~------~-------------~~~~~~~v~~~~~g~~V~ivl~~n--~~~~~HP~HL 401 (495)
T 3t6v_A 347 SFTPPTVPVLLQICS----GANTA------A-------------DLLPSGSVISLPSNSTIEIALPAG--AAGGPHPFHL 401 (495)
T ss_dssp CCCCCSSCHHHHHHT----TCCSS------T-------------TSSSTTSEEEECTTCEEEEEEECC--SSSCCCEEEE
T ss_pred ecCCCCCcchhhhhc----CCcCc------c-------------cccCCcceEEecCCCEEEEEEccC--CCCCCcceee
Confidence 999988887776543 21110 0 011234588999999999999842 2257899999
Q ss_pred CCCceEEEEec
Q 047904 431 HGFNFFVIGQG 441 (448)
Q Consensus 431 HGh~F~Vl~~G 441 (448)
|||+||||+++
T Consensus 402 HGh~F~vl~~~ 412 (495)
T 3t6v_A 402 HGHDFAVSESA 412 (495)
T ss_dssp TTCCEEEEECT
T ss_pred cCCcEEEEecC
Confidence 99999999874
No 5
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.8e-61 Score=506.41 Aligned_cols=324 Identities=24% Similarity=0.404 Sum_probs=245.4
Q ss_pred eeEEEEEEEEEEe-------------eCCcCCCceEEEecCCee-----------------eecccCCCCCCCCCCcccc
Q 047904 33 ITRHYEFDIKLQN-------------LNGKFPGPRIVAREGDQL-----------------HGIRRLRSGWADGPAYITQ 82 (448)
Q Consensus 33 ~~~~~~l~i~~~~-------------~NG~~PGP~I~v~~Gd~v-----------------HGl~~~~~~~~DGvp~vtq 82 (448)
++|+|+|+|++.+ |||++|||+|++++||+| ||++|++++||||+|++||
T Consensus 1 ~~~~~~~~v~~~~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq 80 (534)
T 1zpu_A 1 ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80 (534)
T ss_dssp CEEEEEEEEEEEEECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CEEEEEEEEEEEEecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc
Confidence 5799999999976 999999999999999999 9999999999999999999
Q ss_pred CCCCCCCeeEEEEEeCCccceeEEeecCCCC----------------C---ccc---ccCCCccCCHHHHHHHHHhc---
Q 047904 83 CPIQTGQSCVYNFTIVGRRGKLWWHAHMTCL----------------P---LWE---SAGEWFNGGPKAIINQALQT--- 137 (448)
Q Consensus 83 ~pI~PG~~ftY~f~~~~~~GT~wYH~H~~~~----------------P---~~e---~~~d~~~~~~~~~~~~~~~~--- 137 (448)
|||+||++|+|+|++++++||||||||.+.| | ++| +++||++.+..++...+...
T Consensus 81 ~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~p~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~ 160 (534)
T 1zpu_A 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSFPYDYDEELSLSLSEWYHDLVTDLTKSFMSVYNP 160 (534)
T ss_dssp CCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTCCSCCSEEEEEEEEEECSSCHHHHHHHHSSTTCT
T ss_pred CCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCCCCCCcceEEEEeeccccCCHHHHHHHHhccccC
Confidence 9999999999999995599999999999977 2 445 89999999988776554321
Q ss_pred CCCCCCCccEEecCCCCCCCCCCcccccccccchhcccccccccceeecccccccccCcccceEEEEeCCcEEEEEEEec
Q 047904 138 GGGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINA 217 (448)
Q Consensus 138 g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRliNa 217 (448)
......+|.+||||+. .+.++|++||+|||||||+
T Consensus 161 ~g~~~~~d~~liNG~~---------------------------------------------~~~~~v~~g~~~RlRliNa 195 (534)
T 1zpu_A 161 TGAEPIPQNLIVNNTM---------------------------------------------NLTWEVQPDTTYLLRIVNV 195 (534)
T ss_dssp TCCCCCCSEEEETTBS---------------------------------------------SCEEECCSSCEEEEEEEEC
T ss_pred CCCCCCCceEEECCCC---------------------------------------------ceEEEEECCCEEEEEEEec
Confidence 1123356777777753 1789999999999999999
Q ss_pred cCCCeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCcccccc--cC-------------------------CcceEEE
Q 047904 218 ALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGT--FD-------------------------NSTVAGI 270 (448)
Q Consensus 218 ~~~~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeRydv~--~~-------------------------~~~~~ai 270 (448)
|+.+.+.|+|+||+|+|||+||.+++|+.+++|.|++|||||+. +. .....||
T Consensus 196 ~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ai 275 (534)
T 1zpu_A 196 GGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSY 275 (534)
T ss_dssp CSSCCEEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEE
T ss_pred cCCceEEEEEcCCeeEEEeccCcCccccEeceEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEE
Confidence 99999999999999999999999999999999999999999972 11 1234678
Q ss_pred EEEeCCCCCCCCCCCCCCCCCcCCcCCCCCCccceeeeccccccccCCCCCCCCCCCcceEEEEEEeeCC---CCCcccc
Q 047904 271 LEYERPPNFHHSSNSIKKLPLFKPILHALKDISFATCFTSKLRSLASTQFPANVPQNVDRRFFFTVGLGT---SPCQTSV 347 (448)
Q Consensus 271 L~Y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~l~~~~~~---~~~~~~i 347 (448)
|+|.++.. ...+ +....+.. + .....++++.. .+++..+++++.+.+.+.. ....|++
T Consensus 276 l~y~~~~~--------~p~~---~~~~~~~~--~--~~~~~l~p~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~i 336 (534)
T 1zpu_A 276 MVYNKTAA--------LPTQ---NYVDSIDN--F--LDDFYLQPYEK----EAIYGEPDHVITVDVVMDNLKNGVNYAFF 336 (534)
T ss_dssp EESCTTSC--------BCCC---CCCSCSSC--S--CCGGGCCBSSC----CCCCCSCSEEEEEEEEEEECTTSCEEEEE
T ss_pred EEeCCCCC--------CCCC---Cccccccc--c--cccccceeCCC----CCCCCCCCeEEEEEEEeeccCCceeEEEE
Confidence 88876532 0000 00111100 0 01123444421 1233567888888776532 1225899
Q ss_pred cceeeecCChhhhhhhhcCCCCCccCCCCCCCCCccCCCCCCCCCCCccCCceeEEEeecCCEEEEEEeecCCCCCCCCC
Q 047904 348 NNISFVMPTTALFQAHFIGKPNGVYTPDFPTSPLIPFNYTGNPPNNTMVSNGTTLVVLTFNTNVELIMQDTSILGTESHP 427 (448)
Q Consensus 348 N~~sf~~p~~pll~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~Vdivi~N~~~~~~~~HP 427 (448)
||++|..|..|+|.+.+.. +.+. .. +. ..+.+++++.++.|++|||+|+|.. .+.||
T Consensus 337 Ng~s~~~~~~P~L~~~~~~---~~~~----~~-~~------------~~~~~~~~~~~~~g~~v~ivi~N~~---~~~HP 393 (534)
T 1zpu_A 337 NNITYTAPKVPTLMTVLSS---GDQA----NN-SE------------IYGSNTHTFILEKDEIVEIVLNNQD---TGTHP 393 (534)
T ss_dssp TTBCCCCCSSCHHHHHTTS---GGGT----TC-GG------------GGCSSSCEEEECTTCEEEEEEEECS---SSCEE
T ss_pred CCCcccCCCCCceeeeccc---Cccc----CC-Cc------------ccCCCceEEEeCCCCEEEEEEeCCC---CCCCC
Confidence 9999999988877654431 2111 11 11 1223467889999999999999975 57899
Q ss_pred cccCCCceEEEEecCC
Q 047904 428 LHLHGFNFFVIGQGFG 443 (448)
Q Consensus 428 ~HLHGh~F~Vl~~G~G 443 (448)
||||||+||||++|.|
T Consensus 394 ~HLHGh~F~Vl~~~~~ 409 (534)
T 1zpu_A 394 FHLHGHAFQTIQRDRT 409 (534)
T ss_dssp EEETTCCEEEEEECCC
T ss_pred eEecCCceEEEeecCC
Confidence 9999999999999875
No 6
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=1.3e-60 Score=502.84 Aligned_cols=343 Identities=25% Similarity=0.454 Sum_probs=244.5
Q ss_pred HHHHHHhcCceeceeEEEEEEEEEEe-------------eCCcCCCceEEEecCCee---------------------ee
Q 047904 20 FIALCLLAEPAFGITRHYEFDIKLQN-------------LNGKFPGPRIVAREGDQL---------------------HG 65 (448)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~l~i~~~~-------------~NG~~PGP~I~v~~Gd~v---------------------HG 65 (448)
++++++++...++..++|+|+|++.+ |||++|||+|||++||+| ||
T Consensus 9 ~~~~~~~~~~~~~~~~~~~l~i~~~~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG 88 (521)
T 1v10_A 9 SLVVLSLTSLSLAATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHG 88 (521)
T ss_dssp -------------CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEET
T ss_pred HHHHHHhhhhhcccCceEEEEEEEEEEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCC
Confidence 33444444556778889999999875 999999999999999999 99
Q ss_pred cccCCCCCCCCCCccccCCCCCCCeeEEEEEeCCccceeEEeecCCCC-------------C--------c---cc---c
Q 047904 66 IRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVGRRGKLWWHAHMTCL-------------P--------L---WE---S 118 (448)
Q Consensus 66 l~~~~~~~~DGvp~vtq~pI~PG~~ftY~f~~~~~~GT~wYH~H~~~~-------------P--------~---~e---~ 118 (448)
++|++++||||+|++|||||+||++|+|+|++++++||||||||.+.| | + +| +
T Consensus 89 l~~~~~~~~DGv~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~ 168 (521)
T 1v10_A 89 FFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVIT 168 (521)
T ss_dssp CCCTTCGGGSCCBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEE
T ss_pred eeccCCCccCCCcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcccccccCCCCCceeEEE
Confidence 999999999999999999999999999999976899999999999888 1 1 25 8
Q ss_pred cCCCccCCHHHHHHHHHhcCCCCCCCccEEecCCCCCCCCCCcccccccccchhcccccccccceeecccccccccCccc
Q 047904 119 AGEWFNGGPKAIINQALQTGGGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGR 198 (448)
Q Consensus 119 ~~d~~~~~~~~~~~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ng~~~~~~~~~~ 198 (448)
++||++.+..++... .+...+.+|.++|||++. +.|... ..+
T Consensus 169 l~D~~~~~~~~~~~~---~~~~~~~~d~~liNG~~~--~~~~~~---------------------------------~~~ 210 (521)
T 1v10_A 169 IADWYHSLSTVLFPN---PNKAPPAPDTTLINGLGR--NSANPS---------------------------------AGQ 210 (521)
T ss_dssp EEEECSSCCC----------CCCSCCSEEEETTBCC--CSSCGG---------------------------------GSC
T ss_pred EcccccCCHHHHhhc---cCCCCCCCCEEEECCccc--CCCCCC---------------------------------CCC
Confidence 899998876654321 112234678999999852 344310 013
Q ss_pred ceEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCccccccc--CC------------
Q 047904 199 DMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGTF--DN------------ 264 (448)
Q Consensus 199 ~~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeRydv~~--~~------------ 264 (448)
.+.++|++|++|||||||+|+.+.+.|+|+||+|+||++||.+++|+.++++.|+||||||+.+ ..
T Consensus 211 ~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~ 290 (521)
T 1v10_A 211 LAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPS 290 (521)
T ss_dssp CCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEES
T ss_pred ceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCCccccceeeeeEEEcccceEEEEEEcCCCCCceeeeeccc
Confidence 4789999999999999999999999999999999999999999999999999999999999721 10
Q ss_pred --------cceEEEEEEeCCCCCCCCCCCCCCCCCcCCcCCCCCCccceeeeccccccccCCCCCC-CCCCCcceEEEEE
Q 047904 265 --------STVAGILEYERPPNFHHSSNSIKKLPLFKPILHALKDISFATCFTSKLRSLASTQFPA-NVPQNVDRRFFFT 335 (448)
Q Consensus 265 --------~~~~aiL~Y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~-~~p~~~d~~~~l~ 335 (448)
....|||+|.+... . . |..+..... ...+.+|+++...+.|. +.+...+.++.+.
T Consensus 291 ~~~~~~~~~~~~ail~y~~~~~--------~-~----p~~~~~~~~---~~~~~~l~p~~~~~~p~~~~~~~~~~~~~l~ 354 (521)
T 1v10_A 291 NGRNGFTGGINSAIFRYQGAAV--------A-E----PTTSQNSGT---ALNEANLIPLINPGAPGNPVPGGADINLNLR 354 (521)
T ss_dssp SSSCSCGGGTTEEEEEETTCCS--------C-C----CCCCCCCSC---BCCGGGCCBSSCCCCSSCSSTTCSSEEEECC
T ss_pred cccccCCCCceeEEEEECCCCC--------C-C----CCCCCCccc---ccchhhcccCCcccCCCcccCCcceEEEEEE
Confidence 11258999986542 0 1 111111000 01123455553222221 1223456666665
Q ss_pred EeeCCCCCcccccceeeecCChhhhhhhhcCCCCCccCCCCCCCCCccCCCCCCCCCCCccCCceeEEEeecCCEEEEEE
Q 047904 336 VGLGTSPCQTSVNNISFVMPTTALFQAHFIGKPNGVYTPDFPTSPLIPFNYTGNPPNNTMVSNGTTLVVLTFNTNVELIM 415 (448)
Q Consensus 336 ~~~~~~~~~~~iN~~sf~~p~~pll~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~Vdivi 415 (448)
+++++..+.|+|||++|..|..|+|.+.+.+ .... ...+.++.++.++.|++|||++
T Consensus 355 ~~~~~~~~~~~iNg~~~~~~~~P~l~~~~~g----~~~~-------------------~~~~~~~~~~~v~~g~~vei~l 411 (521)
T 1v10_A 355 IGRNATTADFTINGAPFIPPTVPVLLQILSG----VTNP-------------------NDLLPGGAVISLPANQVIEISI 411 (521)
T ss_dssp EECCSSSSCCEESSCCCCCCSSCHHHHHHHT----CCCG-------------------GGSSSTTTEEEECTTCEEEEEE
T ss_pred EecCCceeEEEECCCcccCCCCchhhhhhcC----Cccc-------------------ccCCCCceEEEecCCCEEEEEE
Confidence 5544444579999999998888877765542 1100 0122346789999999999999
Q ss_pred eecCCCCCCCCCcccCCCceEEEEecCCC
Q 047904 416 QDTSILGTESHPLHLHGFNFFVIGQGFGN 444 (448)
Q Consensus 416 ~N~~~~~~~~HP~HLHGh~F~Vl~~G~G~ 444 (448)
+| . +.||||||||+||||++|.|.
T Consensus 412 ~N-~----~~HP~HLHGh~F~Vl~~~~~~ 435 (521)
T 1v10_A 412 PG-G----GNHPFHLHGHNFDVVRTPGSS 435 (521)
T ss_dssp EC-C----BSCEEEESSCCEEEEECTTCS
T ss_pred cC-C----CCCCEEEccceEEEEecCCCC
Confidence 99 3 689999999999999998764
No 7
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=1.7e-56 Score=475.01 Aligned_cols=340 Identities=26% Similarity=0.458 Sum_probs=243.1
Q ss_pred ceeceeEEEEEEEEEEe---------------eCCcCCCceEEEecCCee-----------------eecccCCCCCCCC
Q 047904 29 PAFGITRHYEFDIKLQN---------------LNGKFPGPRIVAREGDQL-----------------HGIRRLRSGWADG 76 (448)
Q Consensus 29 ~~~~~~~~~~l~i~~~~---------------~NG~~PGP~I~v~~Gd~v-----------------HGl~~~~~~~~DG 76 (448)
+..+++++|+|++++.+ |||++|||+|||++||+| ||++|++++||||
T Consensus 28 p~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG 107 (559)
T 2q9o_A 28 PDTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDG 107 (559)
T ss_dssp CCCCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSC
T ss_pred CCCCeEEEEEEEEEEeEeeECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCC
Confidence 35788999999998764 999999999999999999 9999999999999
Q ss_pred CCccccCCCCC-CCeeEEEEEeCCccceeEEeecCCCC-------------C-----ccc----ccCCCccCCHHHHHHH
Q 047904 77 PAYITQCPIQT-GQSCVYNFTIVGRRGKLWWHAHMTCL-------------P-----LWE----SAGEWFNGGPKAIINQ 133 (448)
Q Consensus 77 vp~vtq~pI~P-G~~ftY~f~~~~~~GT~wYH~H~~~~-------------P-----~~e----~~~d~~~~~~~~~~~~ 133 (448)
+|++|||||+| |++|+|+|++ .++||||||||...| | +.| +++||++.+..++...
T Consensus 108 ~~~~tq~~I~P~G~~~~Y~f~~-~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~d~d~~~l~l~Dw~~~~~~~~~~~ 186 (559)
T 2q9o_A 108 ANGVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPASLPYDIDLGVFPITDYYYRAADDLVHF 186 (559)
T ss_dssp CBTTTBCCBCTTTEEEEEEEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECCCSSCCSEEEEEEEEEEECSSCHHHHHHH
T ss_pred CCccccCccCCCCCeEEEEEEC-CCCEEEEEEEcccchhcCCceEEEEecCCCcCCCcccceEEEEeccccCCHHHHhhh
Confidence 99999999999 9999999998 789999999999877 2 222 8899999988876543
Q ss_pred HHhcCCCCCCCccEEecCCCCCCCCCCcccccccccchhcccccccccceeecccccccccCcccceEEEEeCCcEEEEE
Q 047904 134 ALQTGGGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLR 213 (448)
Q Consensus 134 ~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlR 213 (448)
.. .+ .+..+|.++|||+.. ..|.. + +..+.++|++||+||||
T Consensus 187 ~~-~~-~~~~~d~~liNG~~~--~~~~~-------------------------~---------g~~~~~~v~~g~~~RlR 228 (559)
T 2q9o_A 187 TQ-NN-APPFSDNVLINGTAV--NPNTG-------------------------E---------GQYANVTLTPGKRHRLR 228 (559)
T ss_dssp HT-TS-CCCCBSEEEETTBCB--CTTTC-------------------------C---------BCCCEEEECTTCEEEEE
T ss_pred hh-cC-CCCccceeEECCccc--cCcCC-------------------------C---------CCceEEEEcCCCEEEEE
Confidence 32 22 345678999999863 22321 1 12378999999999999
Q ss_pred EEeccCCCeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCccccccc--C----------------------CcceEE
Q 047904 214 IINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGTF--D----------------------NSTVAG 269 (448)
Q Consensus 214 liNa~~~~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeRydv~~--~----------------------~~~~~a 269 (448)
|||+|+.+.+.|+|+||+|+|||+||.+++|+.++++.|+||||||+.+ . .....|
T Consensus 229 liNa~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~a 308 (559)
T 2q9o_A 229 ILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAA 308 (559)
T ss_dssp EEECCSSCCEEEEETTBCEEEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEE
T ss_pred EEecCCCceEEEEECCCceEEEecCCcccCceEeCeEEEccEEEEEEEEECCCCCCcEEEEEEeccccccCCCCCCceeE
Confidence 9999999999999999999999999999999999999999999999721 1 123478
Q ss_pred EEEEeCCCCCCCCCCCCCCCCCcCCcCCCCCCccceeeeccccccccCCCCCCC-CCCCcceEEEEEEee-CCCCCcccc
Q 047904 270 ILEYERPPNFHHSSNSIKKLPLFKPILHALKDISFATCFTSKLRSLASTQFPAN-VPQNVDRRFFFTVGL-GTSPCQTSV 347 (448)
Q Consensus 270 iL~Y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~-~p~~~d~~~~l~~~~-~~~~~~~~i 347 (448)
||+|.++.. ..|.. +..+.. +..+.. ...+.++.....|.. .....+.++.+.... ......|+|
T Consensus 309 il~y~~~~~---------~~P~~-~~~~~~-~~~~~~--~~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i 375 (559)
T 2q9o_A 309 IFHYAGAPG---------GLPTD-EGTPPV-DHQCLD--TLDVRPVVPRSVPVNSFVKRPDNTLPVALDLTGTPLFVWKV 375 (559)
T ss_dssp EEEETTSCC---------SCCCC-CCCCCC-CCTTCC--CSCCCBSSCCBCCCTTCCCCGGGEEEEEEECSSSSSCEEEE
T ss_pred EEEECCCCC---------CCCCC-CCCcCC-Cccccc--ccccccCCCCCCCCcccccceeEEEEEEeecCCCceEEEEE
Confidence 999976532 11111 000100 111110 123333321111111 111224455555432 123347999
Q ss_pred cceeeecC-ChhhhhhhhcCCCCCccCCCCCCCCCccCCCCCCCCCCCccCCceeEEEeec-CCEEEEEEeecCC-CCCC
Q 047904 348 NNISFVMP-TTALFQAHFIGKPNGVYTPDFPTSPLIPFNYTGNPPNNTMVSNGTTLVVLTF-NTNVELIMQDTSI-LGTE 424 (448)
Q Consensus 348 N~~sf~~p-~~pll~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~-g~~Vdivi~N~~~-~~~~ 424 (448)
||++|..+ ..|+|.+.+.+. .+| ..+.+++.++. ++|++|+|+|... ...+
T Consensus 376 Ng~s~~~~~~~P~L~~~~~g~------~~~--------------------~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~ 429 (559)
T 2q9o_A 376 NGSDINVDWGKPIIDYILTGN------TSY--------------------PVSDNIVQVDAVDQWTYWLIENDPEGPFSL 429 (559)
T ss_dssp TTBCCCCCTTSCHHHHHHHTC------CCC--------------------CGGGCEEEECCSSCEEEEEEEECTTSSCCC
T ss_pred CCEecccCCCCCcHhHhhcCC------ccC--------------------CCCceEEEcCCCCEEEEEEEeCCCccccCC
Confidence 99999754 567776654421 111 12355677765 5677788888531 0147
Q ss_pred CCCcccCCCceEEEEecC---------CCCC
Q 047904 425 SHPLHLHGFNFFVIGQGF---------GNFN 446 (448)
Q Consensus 425 ~HP~HLHGh~F~Vl~~G~---------G~~~ 446 (448)
.||||||||+||||++|. |.|+
T Consensus 430 ~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~ 460 (559)
T 2q9o_A 430 PHPMHLHGHDFLVLGRSPDVPAASQQRFVFD 460 (559)
T ss_dssp CEEEEESSSCEEEEEESCCCCTTSCCCCCCC
T ss_pred CCcEEECCCceEEEecccccccccccccccC
Confidence 899999999999999998 8886
No 8
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=6.7e-57 Score=472.88 Aligned_cols=323 Identities=26% Similarity=0.440 Sum_probs=238.6
Q ss_pred EEEEEEEEEEe------------eCCcCCCceEEEecCCee---------------------eecccCCCCCCCCCCccc
Q 047904 35 RHYEFDIKLQN------------LNGKFPGPRIVAREGDQL---------------------HGIRRLRSGWADGPAYIT 81 (448)
Q Consensus 35 ~~~~l~i~~~~------------~NG~~PGP~I~v~~Gd~v---------------------HGl~~~~~~~~DGvp~vt 81 (448)
..|+|+|++.+ |||++ ||+|||++||+| ||++|++++||||+|++|
T Consensus 5 ~~~~l~i~~~~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vt 83 (503)
T 1hfu_A 5 SVDTMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVN 83 (503)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCcccc
Confidence 46888888876 99999 999999999999 999999999999999999
Q ss_pred cCCCCCCCeeEEEEEeCCccceeEEeecCCCC-------------C--------c---cc---ccCCCccCCHHHHHHHH
Q 047904 82 QCPIQTGQSCVYNFTIVGRRGKLWWHAHMTCL-------------P--------L---WE---SAGEWFNGGPKAIINQA 134 (448)
Q Consensus 82 q~pI~PG~~ftY~f~~~~~~GT~wYH~H~~~~-------------P--------~---~e---~~~d~~~~~~~~~~~~~ 134 (448)
||||+||++|+|+|++++++||||||||.+.| | + +| +++||++....++.
T Consensus 84 q~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~--- 160 (503)
T 1hfu_A 84 QCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQ--- 160 (503)
T ss_dssp BCCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSTTSEEEEEEECSSCGGGCC---
T ss_pred cCCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCCCcccCCCCCCceEEEEEcccccCChHHhc---
Confidence 99999999999999976899999999999888 1 1 24 88999988765431
Q ss_pred HhcCCCCCCCccEEecCCCCCCCCCCcccccccccchhcccccccccceeecccccccccCcccceEEEEeCCcEEEEEE
Q 047904 135 LQTGGGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRI 214 (448)
Q Consensus 135 ~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRl 214 (448)
+ .+.+|.+||||++ .+.|.. ..+.+.++|++|++|||||
T Consensus 161 ---~--~~~~d~~liNG~~--~~~~~~----------------------------------~~~~~~~~v~~g~~~RlRl 199 (503)
T 1hfu_A 161 ---G--AAQPDATLINGKG--RYVGGP----------------------------------AAELSIVNVEQGKKYRMRL 199 (503)
T ss_dssp --------CCSEEEETTBC--CBTTCC----------------------------------CCCCCEEEECTTCEEEEEE
T ss_pred ---C--CCCCCEEEECccc--ccCCCC----------------------------------CCcceEEEEcCCCEEEEEE
Confidence 1 1357899999985 244431 1134889999999999999
Q ss_pred EeccCCCeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCccccccc--CC------------------------cceE
Q 047904 215 INAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGTF--DN------------------------STVA 268 (448)
Q Consensus 215 iNa~~~~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeRydv~~--~~------------------------~~~~ 268 (448)
||+|+.+.+.|+|+||+|+|||+||.+++|+.++++.|+||||||+.+ .. ....
T Consensus 200 iN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ 279 (503)
T 1hfu_A 200 ISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNS 279 (503)
T ss_dssp EECCSSCCEEEEETTCCEEEEEETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTE
T ss_pred EecCCcccEEEEEcCceEEEEeccCccccccccCeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceE
Confidence 999999999999999999999999999999999999999999999721 10 0126
Q ss_pred EEEEEeCCCCCCCCCCCCCCCCCcCCcCCCCCCccceeeeccccccccCCCCCC-CCCCCcceEEEEEEeeCCCCCcccc
Q 047904 269 GILEYERPPNFHHSSNSIKKLPLFKPILHALKDISFATCFTSKLRSLASTQFPA-NVPQNVDRRFFFTVGLGTSPCQTSV 347 (448)
Q Consensus 269 aiL~Y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~-~~p~~~d~~~~l~~~~~~~~~~~~i 347 (448)
|||+|.++... .+.. +..|... . ....+|+++...+.|. ..+...+.++.+.+++.+. .|+|
T Consensus 280 ail~y~~~~~~---------~p~~-~~~~~~~---~--l~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~~~~--~~~i 342 (503)
T 1hfu_A 280 AILRYAGAANA---------DPTT-SANPNPA---Q--LNEADLHALIDPAAPGIPTPGAADVNLRFQLGFSGG--RFTI 342 (503)
T ss_dssp EEEEETTSCSS---------CCCC-CCCSSCC---B--CCGGGCBBSSSCSCSSCSSTTCSSEEEECCEEEETT--EEEE
T ss_pred EEEEECCCCCC---------CCCC-CCCCccC---C--CccccccccCccCCCCcccCCcceEEEEEEeeccCc--eEEE
Confidence 89999865420 1110 1111100 0 0123455553222221 1222456666555543333 6999
Q ss_pred cceeeecCChhhhhhhhcCCCCCccCCCCCCCCCccCCCCCCCCCCCccCCceeEEEeecCCEEEEEEeecCCCCCCCCC
Q 047904 348 NNISFVMPTTALFQAHFIGKPNGVYTPDFPTSPLIPFNYTGNPPNNTMVSNGTTLVVLTFNTNVELIMQDTSILGTESHP 427 (448)
Q Consensus 348 N~~sf~~p~~pll~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~Vdivi~N~~~~~~~~HP 427 (448)
||++|..|..|+|.+.+. |.+.. ...+.++.++.++.|++|||+++|... .+.||
T Consensus 343 Ng~~~~~~~~P~l~~~~~----g~~~~-------------------~~~~~~~~~~~v~~g~~vei~l~~n~~--~~~HP 397 (503)
T 1hfu_A 343 NGTAYESPSVPTLLQIMS----GAQSA-------------------NDLLPAGSVYELPRNQVVELVVPAGVL--GGPHP 397 (503)
T ss_dssp TTBCCCCCSSCHHHHHHT----TCCSG-------------------GGSSSTTSEEEECSSCEEEEEEECCST--TCCCE
T ss_pred CCCccCCCCCcchhhhhc----CCccc-------------------ccCCCCceEEEccCCCEEEEEEECCCC--CCCCC
Confidence 999999888887776543 21110 012335678999999999999995431 57899
Q ss_pred cccCCCceEEEEecCCC
Q 047904 428 LHLHGFNFFVIGQGFGN 444 (448)
Q Consensus 428 ~HLHGh~F~Vl~~G~G~ 444 (448)
||||||+||||++|.|.
T Consensus 398 ~HLHGh~F~Vl~~~~~~ 414 (503)
T 1hfu_A 398 FHLHGHAFSVVRSAGSS 414 (503)
T ss_dssp EEETTCCEEEEECTTCC
T ss_pred EEEecceEEEEecCCCC
Confidence 99999999999998764
No 9
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=3.3e-50 Score=416.49 Aligned_cols=176 Identities=19% Similarity=0.281 Sum_probs=141.8
Q ss_pred eeEEEEEEEEEEe-------------eCCcCCCceEEEecCCee----------------eecccCCCCCCCCCCccccC
Q 047904 33 ITRHYEFDIKLQN-------------LNGKFPGPRIVAREGDQL----------------HGIRRLRSGWADGPAYITQC 83 (448)
Q Consensus 33 ~~~~~~l~i~~~~-------------~NG~~PGP~I~v~~Gd~v----------------HGl~~~~~~~~DGvp~vtq~ 83 (448)
.+++|+|++++.+ |||++|||+|||++||+| ||++++++ |||+| ||
T Consensus 17 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~~---~~ 91 (451)
T 2uxt_A 17 RGQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGP--LMGGP---AR 91 (451)
T ss_dssp SSCCEEEEEEECCGGGCSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCGG--GSCSG---GG
T ss_pred CceEEEEEEEEEEEEcCCCceeEEEEECCcccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCCC--CCCCC---cC
Confidence 3578999999986 999999999999999999 99999986 99998 89
Q ss_pred CCCCCCeeEEEEEeCCccceeEEeecCCCCC-----------------------------ccc---ccCCCccCCHHHHH
Q 047904 84 PIQTGQSCVYNFTIVGRRGKLWWHAHMTCLP-----------------------------LWE---SAGEWFNGGPKAII 131 (448)
Q Consensus 84 pI~PG~~ftY~f~~~~~~GT~wYH~H~~~~P-----------------------------~~e---~~~d~~~~~~~~~~ 131 (448)
+|+||++|+|+|++.+++||||||||.++.. ++| +++||++....++.
T Consensus 92 ~i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~ 171 (451)
T 2uxt_A 92 MMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPE 171 (451)
T ss_dssp CBCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEE
T ss_pred cCCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCcee
Confidence 9999999999999855699999999996641 112 44444443211100
Q ss_pred HHHHhcCCCCCCCccEEecCCCCCCCCCCcccccccccchhcccccccccceeecccccccccCcccceEEEEeCCcEEE
Q 047904 132 NQALQTGGGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYL 211 (448)
Q Consensus 132 ~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~R 211 (448)
+ .........+|.+++||+.. +.++|++| +||
T Consensus 172 -------------------------~--------------~~~~~~~~~~d~~liNG~~~--------p~~~v~~g-~~R 203 (451)
T 2uxt_A 172 -------------------------Y--------------NEPGSGGFVGDTLLVNGVQS--------PYVEVSRG-WVR 203 (451)
T ss_dssp -------------------------C--------------CCCSSSCCCCSEEEETTEES--------CEEEECSS-EEE
T ss_pred -------------------------c--------------ccccCCCCcCCEEEECCccc--------ceEEecCC-EEE
Confidence 0 00000112456777777643 78999999 999
Q ss_pred EEEEeccCCCeEEEEE-cCCeeEEEEecCcee-ceeEeeeEEecCCcccccc
Q 047904 212 LRIINAALNDELFFSI-ANHTLKVVEADVVYV-KPFETETLLIAPGQTTNGT 261 (448)
Q Consensus 212 lRliNa~~~~~~~~~i-dgh~~~Vva~DG~~v-~P~~~~~i~i~~GeRydv~ 261 (448)
|||||+|+.+.+.|+| |||+|+||++||.++ +|+.++++.|+||||||+.
T Consensus 204 lRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~~P~~~~~l~l~pgeR~dvl 255 (451)
T 2uxt_A 204 LRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAPGERREIL 255 (451)
T ss_dssp EEEEECCSSCCEEEEETTSCCEEEEECSSSEEEEEEEESSEEECTTCEEEEE
T ss_pred EEEEccCCceeEEEEECCCCeEEEEEeCCCccCCceEeceEEECceeEEEEE
Confidence 9999999999999999 899999999999998 7999999999999999973
No 10
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=6.1e-49 Score=406.14 Aligned_cols=308 Identities=21% Similarity=0.255 Sum_probs=197.9
Q ss_pred eceeEEEEEEEEEEe------------eCCcCCCceEEEecCCee----------------eecccCCCCCCCCCCcccc
Q 047904 31 FGITRHYEFDIKLQN------------LNGKFPGPRIVAREGDQL----------------HGIRRLRSGWADGPAYITQ 82 (448)
Q Consensus 31 ~~~~~~~~l~i~~~~------------~NG~~PGP~I~v~~Gd~v----------------HGl~~~~~~~~DGvp~vtq 82 (448)
.+.+++|+|++++.. |||++|||+|+|++||+| ||+++++ |+||++
T Consensus 13 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~---- 86 (439)
T 2xu9_A 13 QGGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPISP--KVDDPF---- 86 (439)
T ss_dssp BTTEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCCT--TTSCTT----
T ss_pred CCCeEEEEEEEEEEEEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCCc--cccCCc----
Confidence 456789999998875 999999999999999999 9999876 899986
Q ss_pred CCCCCCCeeEEEEEeC-CccceeEEeecCCCC----------------C----------ccc---ccCCCccCCHHHHHH
Q 047904 83 CPIQTGQSCVYNFTIV-GRRGKLWWHAHMTCL----------------P----------LWE---SAGEWFNGGPKAIIN 132 (448)
Q Consensus 83 ~pI~PG~~ftY~f~~~-~~~GT~wYH~H~~~~----------------P----------~~e---~~~d~~~~~~~~~~~ 132 (448)
++|+||++|+|+|+++ +++||||||||.++. + ++| +++||++....
T Consensus 87 ~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~~~~~e~~l~l~D~~~~~~~---- 162 (439)
T 2xu9_A 87 LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAIPELREAEEHLLVLKDLALQGGR---- 162 (439)
T ss_dssp CCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGSHHHHTSEEEEEEEEEECEETTE----
T ss_pred ccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccCccCCCCCcEEEEEEeeeeCCCC----
Confidence 4699999999999985 589999999998753 1 112 44455443210
Q ss_pred HHHhcCCCCCCCccEEecCCCCCCCCCCcccccccccchhcccccccccceeecccccccccCcccceEEEEeCCcEEEE
Q 047904 133 QALQTGGGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLL 212 (448)
Q Consensus 133 ~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~Rl 212 (448)
+. .........| ..++.+++||+.. +.++|++| +|||
T Consensus 163 --------------------------~~-------~~~~~~~~~g-~~~~~~~iNG~~~--------p~l~v~~g-~~Rl 199 (439)
T 2xu9_A 163 --------------------------PA-------PHTPMDWMNG-KEGDLVLVNGALR--------PTLVAQKA-TLRL 199 (439)
T ss_dssp --------------------------EC-------CCCHHHHHHC-CCCSEEEETTEES--------CEEECSSS-EEEE
T ss_pred --------------------------cC-------CCCccccccC-CCCCEEEECCccC--------CcEEecCC-eEEE
Confidence 00 0000000000 1245666776643 78999999 9999
Q ss_pred EEEeccCCCeEEEEEcCCeeEEEEecCcee-ceeEeeeEEecCCccccccc--CCcceEEEEEEeCCCCCCCCCCCCC-C
Q 047904 213 RIINAALNDELFFSIANHTLKVVEADVVYV-KPFETETLLIAPGQTTNGTF--DNSTVAGILEYERPPNFHHSSNSIK-K 288 (448)
Q Consensus 213 RliNa~~~~~~~~~idgh~~~Vva~DG~~v-~P~~~~~i~i~~GeRydv~~--~~~~~~aiL~Y~~~~~~~~~~~~~~-~ 288 (448)
||||+|+.+.+.|+|+||+|+||++||.++ +|+.++++.|+||||||+.+ .. .+.-.|+-...... .... .
T Consensus 200 RliN~~~~~~~~~~i~gh~~~vi~~DG~~~~~p~~~~~l~l~pgeR~dv~v~~~~-~G~~~l~~~~~~~~----~~~~~~ 274 (439)
T 2xu9_A 200 RLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVRLRK-EGRFLLQALPYDRG----AMGMMD 274 (439)
T ss_dssp EEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEEESCEEECTTCEEEEEEECCS-SEEEEEEEECCCCC----CEEEEC
T ss_pred EEEecCCCceEEEEECCceEEEEecCCCCCCCceEeceEEECCceeEEEEEEcCC-CceEEEEecccccC----Cccccc
Confidence 999999999999999999999999999998 89999999999999999843 22 22222222211000 0000 0
Q ss_pred CCCcCCc--CCCCCCccce-eeeccc--cccccC--CCCCCCCCCCcceEEEEEEeeCCCCCcccccceeeecCChhhhh
Q 047904 289 LPLFKPI--LHALKDISFA-TCFTSK--LRSLAS--TQFPANVPQNVDRRFFFTVGLGTSPCQTSVNNISFVMPTTALFQ 361 (448)
Q Consensus 289 ~~~~~p~--~p~~~~~~~~-~~~~~~--l~~l~~--~~~p~~~p~~~d~~~~l~~~~~~~~~~~~iN~~sf~~p~~pll~ 361 (448)
.+.+... .......... ...... ..++.. .+++....+..++++.+.++.. ...|++||++|..+.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~l~~~~~l~~~~~~r~~~l~~~~~--g~~~~iNg~~~~~~~----- 347 (439)
T 2xu9_A 275 MGGMAHAMPQGPSRPETLLYLIAPKNPKPLPLPKALSPFPTLPAPVVTRRLVLTEDMM--AARFFINGQVFDHRR----- 347 (439)
T ss_dssp SSSCCEEEECCSCCCEEEEEEEECSSCCCCCCCSCCCCCCCCCCCSEEEEEEEEEEGG--GTEEEETTBCCCTTC-----
T ss_pred cccccccccCCCCCcceeEEEEecCCCccccCcccCCCcccCCCCCcceEEEEEeecc--CceEeECCEECCCCC-----
Confidence 0000000 0000000000 000000 000000 0111001112346666666542 236999999884221
Q ss_pred hhhcCCCCCccCCCCCCCCCccCCCCCCCCCCCccCCceeEEEeecCCEEEEEEeecCCCCCCCCCcccCCCceEEEEec
Q 047904 362 AHFIGKPNGVYTPDFPTSPLIPFNYTGNPPNNTMVSNGTTLVVLTFNTNVELIMQDTSILGTESHPLHLHGFNFFVIGQG 441 (448)
Q Consensus 362 ~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~Vdivi~N~~~~~~~~HP~HLHGh~F~Vl~~G 441 (448)
..+.++.|++|+|+|+|.+ .+.||||||||+||||+++
T Consensus 348 ---------------------------------------~~~~~~~g~~~~~~~~N~~---~~~HP~HLHG~~F~Vl~~~ 385 (439)
T 2xu9_A 348 ---------------------------------------VDLKGQAQTVEVWEVENQG---DMDHPFHLHVHPFQVLSVG 385 (439)
T ss_dssp ---------------------------------------CCEEECTTCEEEEEEEECS---SSCEEEEESSCCBEEEEET
T ss_pred ---------------------------------------CceecCCCCEEEEEEEcCC---CCCCCceeCCCcEEEEeeC
Confidence 0146788999999999975 5789999999999999998
Q ss_pred CCCC
Q 047904 442 FGNF 445 (448)
Q Consensus 442 ~G~~ 445 (448)
.+.+
T Consensus 386 g~~~ 389 (439)
T 2xu9_A 386 GRPF 389 (439)
T ss_dssp TEEC
T ss_pred CCCC
Confidence 7665
No 11
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=2.9e-48 Score=408.98 Aligned_cols=199 Identities=22% Similarity=0.300 Sum_probs=137.0
Q ss_pred eEEEEEEEEEEe--------------eCCcCCCceEEEecCCee----------------eecccCCCCCCCCCCccccC
Q 047904 34 TRHYEFDIKLQN--------------LNGKFPGPRIVAREGDQL----------------HGIRRLRSGWADGPAYITQC 83 (448)
Q Consensus 34 ~~~~~l~i~~~~--------------~NG~~PGP~I~v~~Gd~v----------------HGl~~~~~~~~DGvp~vtq~ 83 (448)
+++|+|++++.. |||++|||+|+|++||+| ||+++++ +|||++ ||
T Consensus 36 ~~~~~l~~~~~~~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~--~~DG~~---~~ 110 (534)
T 3abg_A 36 IWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRA--AFDGWA---ED 110 (534)
T ss_dssp CEEEEEEEECCEECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCCT--TTTTCS---SS
T ss_pred eEEEEEEEEEEEEEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCCC--CCCCCC---CC
Confidence 478999998643 899999999999999999 9999887 599975 89
Q ss_pred CCCCCCeeEEEEEeCCccceeEEeecCCCCC----cccccCCCccCCHHHHHHHHHhcCCCCC---CCc-cEEecCCCCC
Q 047904 84 PIQTGQSCVYNFTIVGRRGKLWWHAHMTCLP----LWESAGEWFNGGPKAIINQALQTGGGPN---ASD-AFTINGLSGS 155 (448)
Q Consensus 84 pI~PG~~ftY~f~~~~~~GT~wYH~H~~~~P----~~e~~~d~~~~~~~~~~~~~~~~g~~~~---~~d-~~liNG~~~~ 155 (448)
+|+||++|+|+|++.+++||||||||.+++. .+.+.+-+...+..+. ..+ .+. ..| .+++...
T Consensus 111 ~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~-----~~~-lp~~~~~~d~~l~l~d~--- 181 (534)
T 3abg_A 111 ITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAED-----ALN-LPSGYGEFDIPMILTSK--- 181 (534)
T ss_dssp CBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTT-----TSC-TTCCHHHHSCCEEEEEE---
T ss_pred CCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCccc-----ccC-CCccCCcceEEEEEeee---
Confidence 9999999999999855689999999998751 0011111111110000 000 000 000 0111111
Q ss_pred CCCCCcccccccccchhcccccccccceeecccccccccCcccceEEEEeCCcEEEEEEEeccCCCeEEEEEcC------
Q 047904 156 LYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAALNDELFFSIAN------ 229 (448)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRliNa~~~~~~~~~idg------ 229 (448)
.++... .+...........+|.+++||+.. +.++|++ ++|||||||+|+.+.+.|+|++
T Consensus 182 ~~~~~g------~~~~~~~~~~~~~gd~~lvNG~~~--------p~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~ 246 (534)
T 3abg_A 182 QYTANG------NLVTTNGELNSFWGDVIHVNGQPW--------PFKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDT 246 (534)
T ss_dssp CBCSSS------CBCCCTTCSSCCCCSEEEETTEES--------CBCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTC
T ss_pred eecCCC------ceeccCCCCccccCceeccCCccC--------ceEEecC-cEEEEEEEecCCcceEEEEEecccCcCC
Confidence 000000 000000001123467788888754 6688988 5999999999999999999987
Q ss_pred -CeeEEEEecCce-eceeEeeeEEecCCcccccc
Q 047904 230 -HTLKVVEADVVY-VKPFETETLLIAPGQTTNGT 261 (448)
Q Consensus 230 -h~~~Vva~DG~~-v~P~~~~~i~i~~GeRydv~ 261 (448)
|+|+|||+||.+ ++|+.+++|.|++|||||+.
T Consensus 247 ~h~~~vIa~DG~~~~~P~~~~~l~l~pgeR~dvl 280 (534)
T 3abg_A 247 RLPFKVIASDSGLLEHPADTSLLYISMAERYEVV 280 (534)
T ss_dssp CCCEEEEEETTEEEEEEEEESCEEECTTCEEEEE
T ss_pred CccEEEEEeCCCcccCceEeceEEECCccEEEEE
Confidence 999999999985 58999999999999999973
No 12
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=6.8e-49 Score=406.15 Aligned_cols=175 Identities=23% Similarity=0.325 Sum_probs=137.6
Q ss_pred eEEEEEEEEEEeeCCc-CCCceEEEecCCee----------------eecccCCCCCCCCCCccccCCCCCCCeeEEEEE
Q 047904 34 TRHYEFDIKLQNLNGK-FPGPRIVAREGDQL----------------HGIRRLRSGWADGPAYITQCPIQTGQSCVYNFT 96 (448)
Q Consensus 34 ~~~~~l~i~~~~~NG~-~PGP~I~v~~Gd~v----------------HGl~~~~~~~~DGvp~vtq~pI~PG~~ftY~f~ 96 (448)
.++|+|++ -.|||+ +|||+||+++||+| ||+++++ +|||+|+ |+|+||++|+|+|+
T Consensus 20 ~~~~~l~~--~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~~---~~i~PG~~~~Y~f~ 92 (448)
T 3aw5_A 20 ATYIEATA--SGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVNW--HNDAHPS---FAITPGESYNYSFD 92 (448)
T ss_dssp CSEEEEET--TEEEETTEESCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCH--HHHTCGG---GCBCTTCEEEEEEE
T ss_pred CcEEEEEE--EEECCccccCceEEEeCCCEEEEEEEECCCCceeEEeCCccCCC--ccCCCCC---ccCCCCCEEEEEEE
Confidence 56788888 349999 99999999999999 9999975 6999997 99999999999999
Q ss_pred eCCccceeEEeecCCCCC-------------------------c-cc---ccCCCccCCHHHHHHHHHhcCCCCCCCccE
Q 047904 97 IVGRRGKLWWHAHMTCLP-------------------------L-WE---SAGEWFNGGPKAIINQALQTGGGPNASDAF 147 (448)
Q Consensus 97 ~~~~~GT~wYH~H~~~~P-------------------------~-~e---~~~d~~~~~~~~~~~~~~~~g~~~~~~d~~ 147 (448)
+++++||||||||.++.. + +| +++||++.+ .++..
T Consensus 93 ~~~~~GT~wYH~H~~~~~~~q~~~Gl~G~liV~~~~~~~~l~~d~~e~~l~l~D~~~~~-~~~~~--------------- 156 (448)
T 3aw5_A 93 VVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDSGSDLGFKYGVNDLPLVISDRRFIG-GAPVY--------------- 156 (448)
T ss_dssp CCSCSEEEEEEECCTTTHHHHHHTTCCEEEEEECTTTTTTCCBTTTEEEEEEEEEEEET-TEEEC---------------
T ss_pred cCCCCCceEeccCCCCchHHHHhccceEEEEEeCCccccCCCCCCceEEEEEEeeccCC-Ccccc---------------
Confidence 955899999999976551 1 22 455555433 11100
Q ss_pred EecCCCCCCCCCCcccccccccc-hhcccccccccceeecccccccccCcccceEEEEeCCcEEEEEEEeccCCCeEEEE
Q 047904 148 TINGLSGSLYNRSAKEFQVEDMI-FEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAALNDELFFS 226 (448)
Q Consensus 148 liNG~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRliNa~~~~~~~~~ 226 (448)
+. ..... ....+|.+++||+.. +.++|++| +|||||||+|+.+.+.|+
T Consensus 157 ---------------------~~~~~~~~-~~~~~~~~liNG~~~--------p~~~v~~g-~~RlRliNa~~~~~~~~~ 205 (448)
T 3aw5_A 157 ---------------------NPTPMEMI-AGFLGNAVLVNGVKD--------AVFKLSGG-SYRLRLVNGSNARLYMLS 205 (448)
T ss_dssp ---------------------CCCHHHHH-HCCCCSEEEETTEET--------CEEEEEEE-EEEEEEEECSSSCCEEEE
T ss_pred ---------------------cccccccc-cCccccEEEECCccc--------ceEEECCC-eEEEEEEcCCCcceEEEE
Confidence 00 00000 012345556666532 78999999 999999999999999999
Q ss_pred E--cC---CeeEEEEecCceec-eeEeeeEEecCCccccccc
Q 047904 227 I--AN---HTLKVVEADVVYVK-PFETETLLIAPGQTTNGTF 262 (448)
Q Consensus 227 i--dg---h~~~Vva~DG~~v~-P~~~~~i~i~~GeRydv~~ 262 (448)
| +| |+|+|||+||.+++ |..++++.|+||||||+..
T Consensus 206 i~~~~~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv 247 (448)
T 3aw5_A 206 IVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEVVV 247 (448)
T ss_dssp EEETTSCEECEEEEEETTEEEEEEEEESCEEECTTCEEEEEE
T ss_pred EEcCCCCCccEEEEEeCCCccCCceEeceEEECCcceEEEEE
Confidence 9 99 99999999999998 9999999999999999844
No 13
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=1e-47 Score=398.92 Aligned_cols=186 Identities=24% Similarity=0.320 Sum_probs=144.4
Q ss_pred HhcCceeceeEEEEEEEEEEe-------------eCCcCCCceEEEecCCee----------------eecccCCCCCCC
Q 047904 25 LLAEPAFGITRHYEFDIKLQN-------------LNGKFPGPRIVAREGDQL----------------HGIRRLRSGWAD 75 (448)
Q Consensus 25 ~~~~~~~~~~~~~~l~i~~~~-------------~NG~~PGP~I~v~~Gd~v----------------HGl~~~~~~~~D 75 (448)
|.+..+.+.+++|+|++++.+ |||++|||+||+++||+| ||+++++ +||
T Consensus 41 l~~~~~~~~~~~~~L~~~~~~~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~--~~D 118 (481)
T 3zx1_A 41 LKNESKEKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPP--DQD 118 (481)
T ss_dssp CCCCCCSTTEEEEEEEEEEEEECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCCCG--GGS
T ss_pred cCCcccCCCeEEEEEEEEEEEEEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCCCCCeeEEecCcccCC--ccC
Confidence 333446788999999999886 999999999999999999 9999864 799
Q ss_pred CCCccccCCCCCCCeeEEEEEeCCc-cceeEEeecCCCC----------------C--------ccc--ccCCCccCCHH
Q 047904 76 GPAYITQCPIQTGQSCVYNFTIVGR-RGKLWWHAHMTCL----------------P--------LWE--SAGEWFNGGPK 128 (448)
Q Consensus 76 Gvp~vtq~pI~PG~~ftY~f~~~~~-~GT~wYH~H~~~~----------------P--------~~e--~~~d~~~~~~~ 128 (448)
|+| ||+|+||++|+|+|+++++ +||||||||.++. + +++ +++||+.....
T Consensus 119 G~p---q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~~~~~~~~~l~l~D~~~~~~g 195 (481)
T 3zx1_A 119 GSP---HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHLKEKDLMISDLRLDENA 195 (481)
T ss_dssp CCT---TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCTTTTSEEEEEEEEEECCBTTS
T ss_pred CCc---cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCccccccCCCceeEEEEEEeccCCC
Confidence 996 8999999999999998543 8999999998654 1 011 55555543211
Q ss_pred HHHHHHHhcCCCCCCCccEEecCCCCCCCCCCcccccccccchhcccccccccceeecccccccccCcccceEEEEeCCc
Q 047904 129 AIINQALQTGGGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGK 208 (448)
Q Consensus 129 ~~~~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ng~~~~~~~~~~~~~i~v~~G~ 208 (448)
++. . .... .......+|.+++||+.. +.++|++|+
T Consensus 196 ~~~--------------------------~----------~~~~-~~~~g~~gd~~lvNG~~~--------p~l~v~~g~ 230 (481)
T 3zx1_A 196 QIP--------------------------N----------NNLN-DWLNGREGEFVLINGQFK--------PKIKLATNE 230 (481)
T ss_dssp CCC--------------------------C----------CCHH-HHHHCCCCSEEEETTEES--------CEEEEETTE
T ss_pred ccc--------------------------c----------ccch-hhccCCcCCEEEECCccC--------ceEEecCCC
Confidence 100 0 0000 000112456677777643 789999998
Q ss_pred EEEEEEEeccCCCeEEEEEcCCeeEEEEecCcee-ceeEeeeEEecCCccccccc
Q 047904 209 TYLLRIINAALNDELFFSIANHTLKVVEADVVYV-KPFETETLLIAPGQTTNGTF 262 (448)
Q Consensus 209 ~~RlRliNa~~~~~~~~~idgh~~~Vva~DG~~v-~P~~~~~i~i~~GeRydv~~ 262 (448)
||||||+|+.+.+.|+|+||+|+||++||.++ +|+.++++.|+||||||+.+
T Consensus 231 --RlRliNa~~~~~~~l~i~g~~~~vIa~DGg~~~~P~~~~~l~l~pgeR~dvlv 283 (481)
T 3zx1_A 231 --RIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKTIYKEELFLSPASRVEVLI 283 (481)
T ss_dssp --EEEEEECCSSCCEEEEETTCEEEEEEETTEEEEEEEEESSEEECTTCEEEEEE
T ss_pred --EEEEEecCCCeEEEEEECCCceEEEEcCCCccCCceEeCeEEECCccEEEEEE
Confidence 99999999999999999999999999998776 79999999999999999843
No 14
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=1.1e-47 Score=403.89 Aligned_cols=191 Identities=21% Similarity=0.294 Sum_probs=142.1
Q ss_pred eeEEEEEEEEEEe--------------eCCcCCCceEEEecCCee-----------------------------------
Q 047904 33 ITRHYEFDIKLQN--------------LNGKFPGPRIVAREGDQL----------------------------------- 63 (448)
Q Consensus 33 ~~~~~~l~i~~~~--------------~NG~~PGP~I~v~~Gd~v----------------------------------- 63 (448)
..++|+|++++.+ |||++|||+|||++||+|
T Consensus 24 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~ts 103 (513)
T 2wsd_A 24 EKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTV 103 (513)
T ss_dssp SCEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBC
T ss_pred CceEEEEEEEEeeeeeCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcE
Confidence 3456899988765 999999999999999987
Q ss_pred ---eecccCCCCCCCCCCc--cccCCCCCCCee---EEEEEeCCccceeEEeecCCCC----------------------
Q 047904 64 ---HGIRRLRSGWADGPAY--ITQCPIQTGQSC---VYNFTIVGRRGKLWWHAHMTCL---------------------- 113 (448)
Q Consensus 64 ---HGl~~~~~~~~DGvp~--vtq~pI~PG~~f---tY~f~~~~~~GT~wYH~H~~~~---------------------- 113 (448)
||+++++ +|||+|+ ++||+|+||++| +|+|++.+++||||||||.++.
T Consensus 104 iHwHGl~~~~--~~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~ 181 (513)
T 2wsd_A 104 VHLHGGVTPD--DSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKR 181 (513)
T ss_dssp EEEETCCCCG--GGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGG
T ss_pred EEcCCCcCCC--ccCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEecccccc
Confidence 5677664 6999996 799999999555 9999985689999999999863
Q ss_pred ---C--ccc---ccCCCccCCHHHHHHHHHhcCCCCCCCccEEecCCCCCCCCCCcccccccccchhcccccccccceee
Q 047904 114 ---P--LWE---SAGEWFNGGPKAIINQALQTGGGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVIL 185 (448)
Q Consensus 114 ---P--~~e---~~~d~~~~~~~~~~~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 185 (448)
| +.| +++||++....++ ..+....... ..+.. ........+|.++
T Consensus 182 ~~lp~~d~d~~l~l~D~~~~~~~~~-----------------~~~~~~~~~~---------~~~~~-~~~~~~~~~d~~l 234 (513)
T 2wsd_A 182 LKLPSDEYDVPLLITDRTINEDGSL-----------------FYPSAPENPS---------PSLPN-PSIVPAFCGETIL 234 (513)
T ss_dssp GCCCCGGGEEEEEEEEEEECTTSCE-----------------ECCSSCSSCC---------TTSCS-SCCCSCCCCSEEE
T ss_pred ccCCCCCCcEEEEEEeeecCCCCce-----------------eccccccccc---------ccccc-cccccccccceEE
Confidence 1 223 6777765432111 0000000000 00000 0000013457788
Q ss_pred cccccccccCcccceEEEEeCCcEEEEEEEeccCCCeEEEEEcCC-eeEEEEecCcee-ceeEeeeEEecCCcccccc
Q 047904 186 SNQEYIGEMNAGRDMILKVKPGKTYLLRIINAALNDELFFSIANH-TLKVVEADVVYV-KPFETETLLIAPGQTTNGT 261 (448)
Q Consensus 186 ~ng~~~~~~~~~~~~~i~v~~G~~~RlRliNa~~~~~~~~~idgh-~~~Vva~DG~~v-~P~~~~~i~i~~GeRydv~ 261 (448)
+||+.. +.++|++ ++|||||||+|+.+.+.|+|+|| +|+|||+||.++ +|+.++++.|++|||||+.
T Consensus 235 iNG~~~--------p~~~v~~-~~~RlRliNa~~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvl 303 (513)
T 2wsd_A 235 VNGKVW--------PYLEVEP-RKYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDII 303 (513)
T ss_dssp ETTEES--------CEEECCS-SEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEE
T ss_pred ECCccc--------ceEEecC-CEEEEEEEccCCcceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEE
Confidence 888754 6789988 58999999999999999999999 999999999999 7999999999999999973
No 15
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=7.9e-46 Score=398.37 Aligned_cols=199 Identities=15% Similarity=0.157 Sum_probs=140.1
Q ss_pred ceeEEEEEEEEEEe--------------eCCcCCCceEEEecCCee----------------eecccCCCCCCCCCC---
Q 047904 32 GITRHYEFDIKLQN--------------LNGKFPGPRIVAREGDQL----------------HGIRRLRSGWADGPA--- 78 (448)
Q Consensus 32 ~~~~~~~l~i~~~~--------------~NG~~PGP~I~v~~Gd~v----------------HGl~~~~~~~~DGvp--- 78 (448)
...+.|+++++..+ |||++|||+|+|++||+| ||+++..++|.|+.+
T Consensus 30 ~~~~~~~i~~~~~~~~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~~ 109 (612)
T 3gyr_A 30 EVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTE 109 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGS
T ss_pred CCcceEEEEEEEEEEeecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCcccccc
Confidence 44577888887765 999999999999999999 777666655544433
Q ss_pred ---------------------------------ccccCCCCCCCeeEEEEEeCCccceeEEeecCCCC------------
Q 047904 79 ---------------------------------YITQCPIQTGQSCVYNFTIVGRRGKLWWHAHMTCL------------ 113 (448)
Q Consensus 79 ---------------------------------~vtq~pI~PG~~ftY~f~~~~~~GT~wYH~H~~~~------------ 113 (448)
|++||+|+||++|+|+|++.+++||||||||.++.
T Consensus 110 ~~~~~~~~~~~~~~~~~~ttiHwHGl~~~~~~DGv~q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~Gl~G~ 189 (612)
T 3gyr_A 110 PGRGGVEPNKDVAALPAWSVTHLHGAQTGGGNDGWADNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAGLYGT 189 (612)
T ss_dssp CSCTTCCCCHHHHTCCCCBCEEEETCCCCTTTSCCGGGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTTTCEEE
T ss_pred ccccccccccccccCCCCceEEcCCCccCCcccCcccCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhccceeE
Confidence 45699999999999999986668999999998764
Q ss_pred -------------C--ccc---ccCCCccCCHHHHHHHHHhcCCCCCCCccEEecCCCCCCCCCCcccccccccchhccc
Q 047904 114 -------------P--LWE---SAGEWFNGGPKAIINQALQTGGGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKN 175 (448)
Q Consensus 114 -------------P--~~e---~~~d~~~~~~~~~~~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~~~~ 175 (448)
| ++| +++||++....+.. ..+.. .......+.... ......
T Consensus 190 liI~d~~~~~~~~p~~d~e~~lvl~Dw~~~~~~~~~----~~~~~--~~~~~~~~~~~~---------------~~~~~~ 248 (612)
T 3gyr_A 190 YLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGR----LNGRL--LHKTVIVQQSNP---------------ETGKPV 248 (612)
T ss_dssp EEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSC----EEEEE--EEEEEEEESSCS---------------SSSCCE
T ss_pred EEEcCccccccCCCCCCccEEEEEEEEecccccccc----ccccc--ccCCccccccCC---------------CCCCcc
Confidence 1 233 67777653221100 00000 000000000000 000011
Q ss_pred ccccccceeecccccccccCcccceEEEEeCCcEEEEEEEeccCCCeEEEEEcCC-------eeEEEEecCcee-ceeEe
Q 047904 176 EGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAALNDELFFSIANH-------TLKVVEADVVYV-KPFET 247 (448)
Q Consensus 176 ~g~~~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRliNa~~~~~~~~~idgh-------~~~Vva~DG~~v-~P~~~ 247 (448)
.....+|.+++||+.. +.+.|++ ++|||||||+|+.+.++|+|++| +|+|||+||.++ +|+.+
T Consensus 249 ~~~~~gd~~~vNG~~~--------p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v 319 (612)
T 3gyr_A 249 SIPFFGPYTTVNGRIW--------PYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPV 319 (612)
T ss_dssp ECCCCCSEEEETTEES--------CEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEE
T ss_pred ccCccCceeeecCCcc--------ceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceec
Confidence 1224678899999864 6788865 68999999999999999999998 499999999999 47665
Q ss_pred ------eeEEecCCccccc
Q 047904 248 ------ETLLIAPGQTTNG 260 (448)
Q Consensus 248 ------~~i~i~~GeRydv 260 (448)
++|.|++||||||
T Consensus 320 ~~p~~~~~l~i~pGeRydV 338 (612)
T 3gyr_A 320 DFDDTLPVLSAAPAERFDL 338 (612)
T ss_dssp CSSSSSSSEEECTTCEEEE
T ss_pred cCcccccEEEeccceEEEE
Confidence 4899999999997
No 16
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=4.2e-45 Score=379.30 Aligned_cols=203 Identities=18% Similarity=0.229 Sum_probs=138.6
Q ss_pred eeEEEEEEEEEEe------------eCCcCCCceEEEecCCee----------------eecccCCCCCCCCCCccccCC
Q 047904 33 ITRHYEFDIKLQN------------LNGKFPGPRIVAREGDQL----------------HGIRRLRSGWADGPAYITQCP 84 (448)
Q Consensus 33 ~~~~~~l~i~~~~------------~NG~~PGP~I~v~~Gd~v----------------HGl~~~~~~~~DGvp~vtq~p 84 (448)
..+.|+|++++.+ |||++|||+|++++||+| ||+++++ ++||+| ||+
T Consensus 16 ~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~p---~~~ 90 (488)
T 3od3_A 16 ARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPG--EVDGGP---QGI 90 (488)
T ss_dssp TTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCCH--HHHCCT---TCC
T ss_pred CCeeEEEEEEEEEEccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccCc--ccCCCC---cCc
Confidence 4578999998876 999999999999999999 9999986 599997 899
Q ss_pred CCCCCeeEEEEEeCCccceeEEeecCCCCC----cccccCCCccCCHHHHHHHHHhcCCCCCCCcc-EEecCCCCCCCCC
Q 047904 85 IQTGQSCVYNFTIVGRRGKLWWHAHMTCLP----LWESAGEWFNGGPKAIINQALQTGGGPNASDA-FTINGLSGSLYNR 159 (448)
Q Consensus 85 I~PG~~ftY~f~~~~~~GT~wYH~H~~~~P----~~e~~~d~~~~~~~~~~~~~~~~g~~~~~~d~-~liNG~~~~~~~~ 159 (448)
|+||++|+|+|++.+++||||||||.++.. .+-+.+-+..++..+. ...........|. +++... +++.
T Consensus 91 i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~---~~~lp~~y~~~d~~lvl~D~---~~~~ 164 (488)
T 3od3_A 91 IPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEIL---KLMLPKQWGIDDVPVIVQDK---KFSA 164 (488)
T ss_dssp BCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHH---TTCCCCCBTTTEEEEEEEEE---CBCT
T ss_pred CcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCcccc---ccCCcccCCccceeEEEEEe---eecC
Confidence 999999999999855589999999987641 0002222222222110 0000000000011 111111 0000
Q ss_pred Ccccccccccchh---cccccccccceeecccccccccCcccceEEEEeCCcEEEEEEEeccCCCeEEEEE-cCCeeEEE
Q 047904 160 SAKEFQVEDMIFE---EKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAALNDELFFSI-ANHTLKVV 235 (448)
Q Consensus 160 ~~~~~~~~~~~~~---~~~~g~~~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRliNa~~~~~~~~~i-dgh~~~Vv 235 (448)
.. .+.+. ........+|.+++||+.. +.+.+ +|++|||||||+|+.+.+.|+| |||+|+||
T Consensus 165 ~g------~~~~~~~~~~~~~g~~gd~~lvNG~~~--------p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vI 229 (488)
T 3od3_A 165 DG------QIDYQLDVMTAAVGWFGDTLLTNGAIY--------PQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVI 229 (488)
T ss_dssp TS------SBCCCCSHHHHHHCCCCSEEEETTBSS--------CEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEE
T ss_pred CC------ceeccccccccccCCCCCEEEEcCCcC--------ccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEE
Confidence 00 00000 0001123456777777643 45555 6789999999999999999999 79999999
Q ss_pred EecCcee-ceeEeeeEEecCCcccccc
Q 047904 236 EADVVYV-KPFETETLLIAPGQTTNGT 261 (448)
Q Consensus 236 a~DG~~v-~P~~~~~i~i~~GeRydv~ 261 (448)
|+||.++ +|+.+++|.|+||||||+.
T Consensus 230 a~DG~~l~~P~~~~~l~l~pGeR~dvl 256 (488)
T 3od3_A 230 ASDGGLLPEPVKVSELPVLMGERFEVL 256 (488)
T ss_dssp EETTEEEEEEEEESCEEECTTCEEEEE
T ss_pred EeCCCcccCccEeceEEECCCCEEEEE
Confidence 9999987 8999999999999999983
No 17
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=3e-43 Score=374.17 Aligned_cols=194 Identities=19% Similarity=0.264 Sum_probs=139.9
Q ss_pred ceeEEEEEEEEEEe--------------eCCcCCCceEEEecCCee----------------------------------
Q 047904 32 GITRHYEFDIKLQN--------------LNGKFPGPRIVAREGDQL---------------------------------- 63 (448)
Q Consensus 32 ~~~~~~~l~i~~~~--------------~NG~~PGP~I~v~~Gd~v---------------------------------- 63 (448)
...++|+|++++.+ |||++|||+|+|++||+|
T Consensus 30 ~~~~~~~l~~~~~~~~l~~~~~~t~~~~ynG~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~~~~~~~p~~~~g~p~~~~~ 109 (612)
T 2g23_A 30 EVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTE 109 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGS
T ss_pred CCeEEEEEEEEEEEEEECCCCcceEEEEECCccCCceEEEECCeEeeEEEEECcCCcccccccccccccccCCCcccccc
Confidence 44688999998876 999999999999999977
Q ss_pred -----------------------eecccCCCCCCCCCCccccCCCCCCCeeEEEEEeCCccceeEEeecCCCC-------
Q 047904 64 -----------------------HGIRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVGRRGKLWWHAHMTCL------- 113 (448)
Q Consensus 64 -----------------------HGl~~~~~~~~DGvp~vtq~pI~PG~~ftY~f~~~~~~GT~wYH~H~~~~------- 113 (448)
||+++.+ .+||++ ||+|+||++|+|+|++.+++||||||||.++.
T Consensus 110 p~~~g~~~~~~~~~~~~~tsiH~HG~~~~~--~~DG~p---~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~ 184 (612)
T 2g23_A 110 PGRGGVEPNKDVAALPAWSVTHLHGAQTGG--GNDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMA 184 (612)
T ss_dssp CSCTTCCCCHHHHTCCCCBCEEEETCCCCT--TTSCCG---GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTTT
T ss_pred cccccccccccccccCCceEEEcCCCCCCC--ccCCCC---cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhhc
Confidence 2344433 378875 89999999999999985679999999999873
Q ss_pred ------------------C--ccc---ccCCCccCCHHHHHHHHHhcCCCCCCCccEEecCCCCCCCCCCcccccccccc
Q 047904 114 ------------------P--LWE---SAGEWFNGGPKAIINQALQTGGGPNASDAFTINGLSGSLYNRSAKEFQVEDMI 170 (448)
Q Consensus 114 ------------------P--~~e---~~~d~~~~~~~~~~~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~ 170 (448)
| ++| +++||++....+ +. ....+..... +.+....+.
T Consensus 185 GL~G~liV~~~~~~~~~lp~~d~d~~l~l~Dw~~~~~~~--------~~---~~~~l~~~~~---~~~~~~~~~------ 244 (612)
T 2g23_A 185 GLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDED--------GR---LNGRLLHKTV---IVQQSNPET------ 244 (612)
T ss_dssp TCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTT--------SC---EEEEEEEEEE---EEESSCSSS------
T ss_pred cceeEEEEcCcccccccCCCCcceEEEEEEEEeccCCcc--------cc---cccccccccc---ccccccccc------
Confidence 1 223 666666532100 00 0000000000 000000000
Q ss_pred hhcccccccccceeecccccccccCcccceEEEEeCCcEEEEEEEeccCCCeEEEEEcCC-------eeEEEEecCcee-
Q 047904 171 FEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAALNDELFFSIANH-------TLKVVEADVVYV- 242 (448)
Q Consensus 171 ~~~~~~g~~~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRliNa~~~~~~~~~idgh-------~~~Vva~DG~~v- 242 (448)
...... ...+|.++|||+.. +.++|++| +|||||||+|+.+.+.|+|++| +|+|||+||.++
T Consensus 245 g~p~~~-~~~gd~~lVNG~~~--------p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa~DG~~l~ 314 (612)
T 2g23_A 245 GKPVSI-PFFGPYTTVNGRIW--------PYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLP 314 (612)
T ss_dssp SCCEEC-CCCCSEEEETTEES--------CEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEE
T ss_pred Cccccc-CCcCCEEEECCccC--------CeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEEeCCeEcc
Confidence 000000 13578899999854 78999999 9999999999999999999999 899999999999
Q ss_pred ceeEee------eEEecCCccccc
Q 047904 243 KPFETE------TLLIAPGQTTNG 260 (448)
Q Consensus 243 ~P~~~~------~i~i~~GeRydv 260 (448)
+|+.++ +|.|+||||||+
T Consensus 315 ~P~~~~~~~~~~~l~l~pgeR~dv 338 (612)
T 2g23_A 315 RPVPVDFDDTLPVLSAAPAERFDL 338 (612)
T ss_dssp EEEEECSSSSSSSEEECTTCEEEE
T ss_pred CCEEecccCcccEEEECCcCeEEE
Confidence 599999 999999999997
No 18
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=3.6e-38 Score=312.03 Aligned_cols=181 Identities=27% Similarity=0.450 Sum_probs=145.4
Q ss_pred eeEEEEEEEEEEe-------------eCCcCCCceEEEecCCee----------------eecccCCCCCCCCCCccccC
Q 047904 33 ITRHYEFDIKLQN-------------LNGKFPGPRIVAREGDQL----------------HGIRRLRSGWADGPAYITQC 83 (448)
Q Consensus 33 ~~~~~~l~i~~~~-------------~NG~~PGP~I~v~~Gd~v----------------HGl~~~~~~~~DGvp~vtq~ 83 (448)
++|+|+|++++.+ |||++|||+|+|++||+| ||+++.++.++||+|++|||
T Consensus 1 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~ 80 (318)
T 3g5w_A 1 EKREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQH 80 (318)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred CeEEEEEEEEEEEEEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccc
Confidence 4799999999875 999999999999999999 99999988899999999999
Q ss_pred CCCCCCeeEEEEEeCCccceeEEeecCCCC---------------C----------ccc---ccCCCccCCHHHHHHHHH
Q 047904 84 PIQTGQSCVYNFTIVGRRGKLWWHAHMTCL---------------P----------LWE---SAGEWFNGGPKAIINQAL 135 (448)
Q Consensus 84 pI~PG~~ftY~f~~~~~~GT~wYH~H~~~~---------------P----------~~e---~~~d~~~~~~~~~~~~~~ 135 (448)
+|+||++|+|+|++ .++||||||||...+ | ++| +++||++..... ..
T Consensus 81 ~i~PG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~~~d~e~~l~l~dw~~~~~~~----~~ 155 (318)
T 3g5w_A 81 AIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEKTVTKDYILMLSDWVSSWANK----PG 155 (318)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHHTCCEEEEEEEEEECGGGTTC----TT
T ss_pred cCCCCCEEEEEEEc-CCCEEEEEEccCChhhhhccCCCEEEEEEcCCCcccccccccceeEEEEEeeccccccc----cc
Confidence 99999999999998 799999999997532 1 223 567776532110 00
Q ss_pred hcCCCCCCCccEEecCCCCCCCCCCcccccccccchhcccccccccceeecccccccccCcccceEEEEeCCcEEEEEEE
Q 047904 136 QTGGGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRII 215 (448)
Q Consensus 136 ~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRli 215 (448)
..+.....+|.++|||+. .+. ...++|++|++|||||+
T Consensus 156 ~~~~~~~~~d~~~ING~~-------------------------------------~~~-----~~~l~v~~G~~vrlrli 193 (318)
T 3g5w_A 156 EGGIPGDVFDYYTINAKS-------------------------------------FPE-----TQPIRVKKGDVIRLRLI 193 (318)
T ss_dssp CCCCTTCCCCEEEETTBC-------------------------------------BTS-----SCCEEECTTCEEEEEEE
T ss_pred cCCCCCCcCcEEEEcCcC-------------------------------------CCC-----CccEEeCCCCEEEEEEE
Confidence 011111234556666653 211 14589999999999999
Q ss_pred eccCCCeEEEEEcCCeeEEEEecCcee-ceeEeeeEEecCCcccccc
Q 047904 216 NAALNDELFFSIANHTLKVVEADVVYV-KPFETETLLIAPGQTTNGT 261 (448)
Q Consensus 216 Na~~~~~~~~~idgh~~~Vva~DG~~v-~P~~~~~i~i~~GeRydv~ 261 (448)
|++.. .+.|||+||.|+||+.||.++ +|..+|++.|.||||+++.
T Consensus 194 N~~~~-~h~~hlhGh~f~vi~~dG~~~~~p~~~dtv~l~pger~~v~ 239 (318)
T 3g5w_A 194 GAGDH-VHAIHTHGHISQIAFKDGFPLDKPIKGDTVLIGPGERYDVI 239 (318)
T ss_dssp ECSSS-CEEEEETTSCEEEEEETTEEEEEEEEESEEEECTTCEEEEE
T ss_pred eCCCc-eEEEEECCcEEEEEecCCcccCCCccccEEEECCCCEEEEE
Confidence 99964 799999999999999999998 7999999999999999974
No 19
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=2e-37 Score=309.57 Aligned_cols=181 Identities=27% Similarity=0.470 Sum_probs=141.9
Q ss_pred eeEEEEEEEEEEe-------------eCCcCCCceEEEecCCee----------------eecccCCCCCCCCCCccccC
Q 047904 33 ITRHYEFDIKLQN-------------LNGKFPGPRIVAREGDQL----------------HGIRRLRSGWADGPAYITQC 83 (448)
Q Consensus 33 ~~~~~~l~i~~~~-------------~NG~~PGP~I~v~~Gd~v----------------HGl~~~~~~~~DGvp~vtq~ 83 (448)
++|+|+|++++.. |||++|||+|+|++||+| ||+++.+++||||+|++|||
T Consensus 2 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~ 81 (339)
T 2zwn_A 2 AEREFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQ 81 (339)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred ceEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccC
Confidence 4788999998875 999999999999999999 99999999999999999999
Q ss_pred CCCCCCeeEEEEEeCCccceeEEeecCCC--C-------------C----------ccc---ccCCCccCCHHHHHHHHH
Q 047904 84 PIQTGQSCVYNFTIVGRRGKLWWHAHMTC--L-------------P----------LWE---SAGEWFNGGPKAIINQAL 135 (448)
Q Consensus 84 pI~PG~~ftY~f~~~~~~GT~wYH~H~~~--~-------------P----------~~e---~~~d~~~~~~~~~~~~~~ 135 (448)
+|+||++|+|+|++ .++||||||||... + | +.| +++||+...... ..
T Consensus 82 ~I~PG~~~~y~f~~-~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~~~~d~e~~l~l~d~~~~~~~~----~~ 156 (339)
T 2zwn_A 82 PIEAGDSYTYKFKA-DRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIEKRVTKDVIMMMSTWESAVADK----YG 156 (339)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTGGGCSEEEEEEEEEECGGGTTC----TT
T ss_pred ccCCCCeEEEEEEC-CCCEEEEEEecCCchhhhhcCCceEeEEecCCCcccccccCCceEEEEeeheecccccc----cC
Confidence 99999999999998 78999999999754 1 1 122 344444310000 00
Q ss_pred hcCCCCCCCccEEecCCCCCCCCCCcccccccccchhcccccccccceeecccccccccCcccceEEEEeCCcEEEEEEE
Q 047904 136 QTGGGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRII 215 (448)
Q Consensus 136 ~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRli 215 (448)
..+.... .++.+++||+..+ ....++|++|++|||||+
T Consensus 157 ~~g~~~~-------------------------------------~~~~~~ING~~~~-----~~~~~~v~~G~~vrlrli 194 (339)
T 2zwn_A 157 EGGTPMN-------------------------------------VADYFSVNAKSFP-----LTQPLRVKKGDVVKIRFF 194 (339)
T ss_dssp CCCSTTS-------------------------------------CCCEEEETTBCTT-----SSCCEEECTTCEEEEEEE
T ss_pred CCCCCcc-------------------------------------ccceEEEccccCC-----CcccEEECCCCEEEEEEE
Confidence 0000000 2344555554332 124589999999999999
Q ss_pred eccCCCeEEEEEcCCeeEEEEecCceec-eeEeeeEEecCCcccccc
Q 047904 216 NAALNDELFFSIANHTLKVVEADVVYVK-PFETETLLIAPGQTTNGT 261 (448)
Q Consensus 216 Na~~~~~~~~~idgh~~~Vva~DG~~v~-P~~~~~i~i~~GeRydv~ 261 (448)
|++. ..+.|||+||.|+||+.||.+++ |..++++.|.|||||++.
T Consensus 195 N~~~-~~h~~hlhGh~f~vi~~DG~~~~~p~~~dtv~l~pg~r~~v~ 240 (339)
T 2zwn_A 195 GAGG-GIHAMHSHGHDMLVTHKDGLPLDSPYYADTVLVSPGERYDVI 240 (339)
T ss_dssp ECSS-SCEEEEETTCCEEEEEETTEEEEEEEEESEEEECTTCEEEEE
T ss_pred eCCC-ceEEEEECCcEEEEEEeCCeecCCCcEEEEEEECCCCEEEEE
Confidence 9994 58999999999999999999996 889999999999999974
No 20
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=1.2e-36 Score=343.46 Aligned_cols=219 Identities=15% Similarity=0.200 Sum_probs=142.6
Q ss_pred hhHHHHHHHHHHHhcCceeceeEEEEEEEEEEe-----------------------------------------------
Q 047904 13 LKGVLCSFIALCLLAEPAFGITRHYEFDIKLQN----------------------------------------------- 45 (448)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~----------------------------------------------- 45 (448)
|+++++.++++|++ .++++++|+|.+.|.+..
T Consensus 1 ~~~~~~~~~~~~~~-~~~~~~~r~y~i~~~~~~w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (1065)
T 2j5w_A 1 MKILILGIFLFLCS-TPAWAKEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDET 79 (1065)
T ss_dssp --------------------CEEEEEEEEEEEEEESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSS
T ss_pred CchhHHhhhHHHhc-cccccceeEEEEEEEEEEeecCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEeccee
Confidence 44444433333333 667789999999887654
Q ss_pred eCCc--------CCCceEEEecCCee----------------eecccC----CCCCCCCCCc--cccCCCCCCCeeEEEE
Q 047904 46 LNGK--------FPGPRIVAREGDQL----------------HGIRRL----RSGWADGPAY--ITQCPIQTGQSCVYNF 95 (448)
Q Consensus 46 ~NG~--------~PGP~I~v~~Gd~v----------------HGl~~~----~~~~~DGvp~--vtq~pI~PG~~ftY~f 95 (448)
||+. +|||+|||++||+| ||++++ +.+|+||+++ +|||+|+||++|+|+|
T Consensus 80 ~~~~~~~~~w~~~PGP~Ir~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f 159 (1065)
T 2j5w_A 80 FRTTIEKPVWLGFLGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYML 159 (1065)
T ss_dssp TTSBCCCCGGGTTSCCCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEE
T ss_pred ecCCcccccccCCcCCeEEEeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEE
Confidence 5666 89999999999999 999997 5689999999 8999999999999999
Q ss_pred EeCCc---------cceeEEeecCCCC--------------C------------ccc---ccC------CCccCCHHHHH
Q 047904 96 TIVGR---------RGKLWWHAHMTCL--------------P------------LWE---SAG------EWFNGGPKAII 131 (448)
Q Consensus 96 ~~~~~---------~GT~wYH~H~~~~--------------P------------~~e---~~~------d~~~~~~~~~~ 131 (448)
+++++ +||||||||.+.+ | |+| +++ +|++.+..
T Consensus 160 ~~~~~~gp~~~d~~aGT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~~--- 236 (1065)
T 2j5w_A 160 LATEEQSPGEGDGNCVTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDNI--- 236 (1065)
T ss_dssp ECCSTTSCCTTSCSEEEEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHHH---
T ss_pred EeccccCCccCCCCceEEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccchh---
Confidence 98544 5999999999875 1 223 455 44442110
Q ss_pred HHHHhcCCCCCCCccEEecCCCCCCCCCCcccccccccchhcccccccccceeecccccccccCcccceEEEEeCCcEEE
Q 047904 132 NQALQTGGGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYL 211 (448)
Q Consensus 132 ~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~R 211 (448)
..+.. . +.. ++.. . ..+ ...++.+++||+..+ ..+.++|++|++||
T Consensus 237 ~~~~~---~---p~~--~~~~--------~-----~~~--------~~~~~~~~iNG~~~~-----~~~~l~v~~Ge~vR 282 (1065)
T 2j5w_A 237 KTYCS---E---PEK--VDKD--------N-----EDF--------QQSNRMYSVNGYTFG-----SLSGLSMCAEDRVK 282 (1065)
T ss_dssp HHHCS---C---GGG--CCTT--------C-----HHH--------HHHTEEEEETTEETT-----CCCCCEEETTCEEE
T ss_pred hhhhc---C---ccc--cccc--------c-----ccc--------cccCcEEEECCccCC-----CCcceEECCCCEEE
Confidence 01100 0 000 0000 0 000 001234666666431 13678999999999
Q ss_pred EEEEeccCC-CeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCccccccc--C---------------CcceEEEEEE
Q 047904 212 LRIINAALN-DELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGTF--D---------------NSTVAGILEY 273 (448)
Q Consensus 212 lRliNa~~~-~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeRydv~~--~---------------~~~~~aiL~Y 273 (448)
|||||+|.. ..+.|+|+||.|+ ++|+.++++.|+||||||+.+ . .....|+++|
T Consensus 283 lRliNag~~~~~~~~~i~Gh~f~--------v~p~~~dtv~I~pGer~dVlv~~~~pG~y~i~~h~~~h~~~Gm~~~~~V 354 (1065)
T 2j5w_A 283 WYLFGMGNEVDVHAAFFHGQALT--------NKNYRIDTINLFPATLFDAYMVAQNPGEWMLSCQNLNHLKAGLQAFFQV 354 (1065)
T ss_dssp EEEEECSSTTCCEEEEETTCCEE--------ETTEEESEEEECBTCEEEEEEECCSCEEEEEEECSHHHHHTTCEEEEEE
T ss_pred EEEEcCCcccceeEEEEcCCEEE--------ECCeeecEEEECCCcEEEEEEEeCCCeeEEEEecCcchhhCCCEEEEEE
Confidence 999999975 6899999999999 467899999999999999721 1 1345777888
Q ss_pred eCCC
Q 047904 274 ERPP 277 (448)
Q Consensus 274 ~~~~ 277 (448)
.+..
T Consensus 355 ~~~~ 358 (1065)
T 2j5w_A 355 QECN 358 (1065)
T ss_dssp ECSC
T ss_pred ecCC
Confidence 7654
No 21
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=9.2e-34 Score=281.73 Aligned_cols=200 Identities=20% Similarity=0.279 Sum_probs=150.0
Q ss_pred eeceeEEEEEEEEEEe-------------eCCcCCCceEEEecCCee-------------eecccCCCCCCCCCCccccC
Q 047904 30 AFGITRHYEFDIKLQN-------------LNGKFPGPRIVAREGDQL-------------HGIRRLRSGWADGPAYITQC 83 (448)
Q Consensus 30 ~~~~~~~~~l~i~~~~-------------~NG~~PGP~I~v~~Gd~v-------------HGl~~~~~~~~DGvp~vtq~ 83 (448)
..+++++|+|++++.. |||++|||+|+|++||+| |-+|..+...+||++..+
T Consensus 34 ~~~~~~~~~l~~~~~~~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~~dG~~~~~-- 111 (327)
T 1kbv_A 34 DYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATGQGGGAAAT-- 111 (327)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCSGGGGTTTT--
T ss_pred CCCCEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCccccCCCCCcce--
Confidence 4578899999998876 999999999999999999 334433433589988644
Q ss_pred CCCCCCeeEEEEEeCCccceeEEeecCCCC--------------------C--ccc---ccCCCccCCHHH-------HH
Q 047904 84 PIQTGQSCVYNFTIVGRRGKLWWHAHMTCL--------------------P--LWE---SAGEWFNGGPKA-------II 131 (448)
Q Consensus 84 pI~PG~~ftY~f~~~~~~GT~wYH~H~~~~--------------------P--~~e---~~~d~~~~~~~~-------~~ 131 (448)
.|+||++|+|+|++ .++||||||||.++. | |+| +++||++.+... -+
T Consensus 112 ~i~PG~~~~y~f~~-~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~~p~~d~e~~l~~~d~~~~~~~~~~g~~~~~~ 190 (327)
T 1kbv_A 112 FTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGLPKVDKEFYIVQGDFYTKGKKGAQGLQPFDM 190 (327)
T ss_dssp CBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCCCCCSEEEEEEEEEECBSSCTTCCEEECBCH
T ss_pred eecCCCEEEEEEEC-CCCeEEEEEeCCCChhhhhhcceEEEEEEecCCCCCCCceEEEEEeeeeeccCccccccccccCh
Confidence 59999999999998 789999999997531 1 333 666777653100 00
Q ss_pred HHHHhcCCCCCCCccEEecCCCCCCCCCCcccccccccchhcccccccccceeecccccccccCcccceEEEEeCCcEEE
Q 047904 132 NQALQTGGGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYL 211 (448)
Q Consensus 132 ~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~R 211 (448)
.... + ..++.++|||+. ...| ..+.++|++||+||
T Consensus 191 ~~~~--~---~~~~~~~iNG~~-------------------------------------~~~~---~~~~l~v~~G~~vR 225 (327)
T 1kbv_A 191 DKAV--A---EQPEYVVFNGHV-------------------------------------GALT---GDNALKAKAGETVR 225 (327)
T ss_dssp HHHH--H---TCCSEEEETTST-------------------------------------TTTS---GGGCEEEETTEEEE
T ss_pred hHhc--c---CCCceEEEcCcc-------------------------------------cCCC---CceeEEeCCCCEEE
Confidence 0000 0 123455555543 2211 01568999999999
Q ss_pred EEEEeccCCCeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCcccccccC------------------CcceEEEEEE
Q 047904 212 LRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGTFD------------------NSTVAGILEY 273 (448)
Q Consensus 212 lRliNa~~~~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeRydv~~~------------------~~~~~aiL~Y 273 (448)
|||||+++...+.|+|+||.|+||+.||.+++|..++++.|+||||||+.+. .....|+|+|
T Consensus 226 lRliN~~~~~~~~~~l~Gh~f~vi~~DG~~~~p~~~d~l~l~pGer~dv~v~~~~pG~y~l~~h~~~~~~~~g~~a~l~~ 305 (327)
T 1kbv_A 226 MYVGNGGPNLVSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDIPGNYTLVDHSIFRAFNKGALGQLKV 305 (327)
T ss_dssp EEEEEEESSCCEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEEECSCEEEEEEESSTHHHHHSSCEEEEEE
T ss_pred EEEECCCCCCceeEEEeCCEEEEEEcCCCcCCCCceeEEEECCCCEEEEEEEeCCCeEEEEEeccccccccCCcEEEEEE
Confidence 9999999989999999999999999999999999999999999999997321 1246889999
Q ss_pred eCCC
Q 047904 274 ERPP 277 (448)
Q Consensus 274 ~~~~ 277 (448)
++..
T Consensus 306 ~g~~ 309 (327)
T 1kbv_A 306 EGAE 309 (327)
T ss_dssp ESCC
T ss_pred CCCC
Confidence 8764
No 22
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.98 E-value=2.8e-32 Score=266.36 Aligned_cols=173 Identities=28% Similarity=0.360 Sum_probs=139.5
Q ss_pred eceeEEEEEEEEEEe-------------eCCcCCCceEEEecCCee----------------eecccCCCCCCCCCCccc
Q 047904 31 FGITRHYEFDIKLQN-------------LNGKFPGPRIVAREGDQL----------------HGIRRLRSGWADGPAYIT 81 (448)
Q Consensus 31 ~~~~~~~~l~i~~~~-------------~NG~~PGP~I~v~~Gd~v----------------HGl~~~~~~~~DGvp~vt 81 (448)
.+.+|+|+|++++.+ |||++|||+|+|++||+| ||+++ .++||+|+++
T Consensus 31 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~---~~~DG~p~~~ 107 (288)
T 3gdc_A 31 GRTLREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVHR---ATMDGTPGIG 107 (288)
T ss_dssp SCEEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCCC---GGGSCCTTST
T ss_pred CCcEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCcccEEeccccc---cccCCCCCcc
Confidence 456789999998865 999999999999999999 99873 4699999999
Q ss_pred cCCCCCCCeeEEEEEeCCccceeEEeecCCCC---------------C-------ccc---ccCCCccCCHHHHHHHHHh
Q 047904 82 QCPIQTGQSCVYNFTIVGRRGKLWWHAHMTCL---------------P-------LWE---SAGEWFNGGPKAIINQALQ 136 (448)
Q Consensus 82 q~pI~PG~~ftY~f~~~~~~GT~wYH~H~~~~---------------P-------~~e---~~~d~~~~~~~~~~~~~~~ 136 (448)
||+|+||++++|+|++ +++||||||||..+. | ++| +++||+..+
T Consensus 108 ~~~i~PG~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~~~~d~e~~l~~~d~~~~~---------- 176 (288)
T 3gdc_A 108 AGSIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGRPPADDEMVMVMNGYNTDG---------- 176 (288)
T ss_dssp TCSBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCCCCCSEEEEEEEEEECCSS----------
T ss_pred ceeECCCCEEEEEEEc-CCCccEEEEecCcchHHHHhCcCeEEEEEeCCccCCCCcceEEEEEeeEecCC----------
Confidence 9999999999999998 899999999999741 1 334 566666541
Q ss_pred cCCCCCCCccEEecCCCCCCCCCCcccccccccchhcccccccccceeecccccccccCcccceEEEEeCCcEEEEEEEe
Q 047904 137 TGGGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIIN 216 (448)
Q Consensus 137 ~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRliN 216 (448)
|. .++.++|||+.. .. ....+++++|+++||||+|
T Consensus 177 -g~---~~~~~~iNG~~~-------------------------------------~~----~~~~l~v~~Ge~vr~~l~N 211 (288)
T 3gdc_A 177 -GD---DNEFYSVNGLPF-------------------------------------HF----MDFPVKVKQHELVRIHLIN 211 (288)
T ss_dssp -TT---CCSEEEETTSTT-------------------------------------HH----HHSCEEEETTCCEEEEEEE
T ss_pred -CC---CcceEEECcccc-------------------------------------cc----cCcccccCCCCEEEEEEEe
Confidence 11 245667777632 00 0145899999999999999
Q ss_pred ccCCC-eEEEEEcCCeeEEEEecCcee-ceeEeeeEEecCCcccccccC
Q 047904 217 AALND-ELFFSIANHTLKVVEADVVYV-KPFETETLLIAPGQTTNGTFD 263 (448)
Q Consensus 217 a~~~~-~~~~~idgh~~~Vva~DG~~v-~P~~~~~i~i~~GeRydv~~~ 263 (448)
++... .+.|||+||.|+|++ +|..+ .|...|++.|.||||+++.+.
T Consensus 212 ~g~~~~~H~fHlhG~~f~v~~-~g~~~~~~~~~Dtv~v~pg~~~~v~~~ 259 (288)
T 3gdc_A 212 VLEYDPINSFHIHGNFFHYYP-TGTMLTPSEYTDTISQVQGQRGILELR 259 (288)
T ss_dssp CCCSSSEEEEEETTCCEEEEE-TTCCSSCSEEESEEEEETTCEEEEEEC
T ss_pred CCCCCcceeEEEcCCEEEEEc-CCCccCCCceeeEEEeCCCceEEEEEE
Confidence 99654 799999999999998 55555 578999999999999998553
No 23
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.97 E-value=3e-31 Score=257.46 Aligned_cols=184 Identities=17% Similarity=0.194 Sum_probs=134.6
Q ss_pred CceeceeEEEEEEEEEEe----------eCCcCCCceEEEecCCee----------------eecccCCCCCCCCCCccc
Q 047904 28 EPAFGITRHYEFDIKLQN----------LNGKFPGPRIVAREGDQL----------------HGIRRLRSGWADGPAYIT 81 (448)
Q Consensus 28 ~~~~~~~~~~~l~i~~~~----------~NG~~PGP~I~v~~Gd~v----------------HGl~~~~~~~~DGvp~vt 81 (448)
+++.+.+|+|+|+|++.+ +||++|||+|||++||+| ||++++. ++||++ ++
T Consensus 1 ~~~~g~~~~~~l~~~~~~~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~--~~DG~~-~t 77 (276)
T 3kw8_A 1 APAGGEVRHLKMYAEKLADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEI--SSDGTA-MN 77 (276)
T ss_dssp ---CCCEEEEEEEEEECTTSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCCT-TT
T ss_pred CCCcceEEEEEEEEEeCCCCceecceeccCCcccCCeEEEECCCEEEEEEEECCCCCccEeecCcccCC--ccCCCc-CC
Confidence 357899999999999876 899999999999999999 9999976 599999 99
Q ss_pred cCCCCCCCeeEEEEEeCC------------ccceeEEeecCCCCCc--cc----ccCCCccCCHHHHHHHHHhcCCCCCC
Q 047904 82 QCPIQTGQSCVYNFTIVG------------RRGKLWWHAHMTCLPL--WE----SAGEWFNGGPKAIINQALQTGGGPNA 143 (448)
Q Consensus 82 q~pI~PG~~ftY~f~~~~------------~~GT~wYH~H~~~~P~--~e----~~~d~~~~~~~~~~~~~~~~g~~~~~ 143 (448)
||+|+||++|+|+|++++ ++||||||||.++... .. +.+-
T Consensus 78 ~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~---------------------- 135 (276)
T 3kw8_A 78 KSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGP---------------------- 135 (276)
T ss_dssp TCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEE----------------------
T ss_pred cCCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEE----------------------
Confidence 999999999999999843 3799999999876410 00 2221
Q ss_pred CccEEecCCCCCCCCCCcccccccccchhcccccccccceeecccccccccCcccceEEEEeCCcEEEEEEEeccCCCeE
Q 047904 144 SDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAALNDEL 223 (448)
Q Consensus 144 ~d~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRliNa~~~~~~ 223 (448)
++|..+..... ..+ +. +..+-+++||+... +.+.++++.|+++||||+|.+. ..+
T Consensus 136 ---liV~~~~~~~~---drE-----~~--------l~l~~~~iNG~~~~-----~~p~i~v~~G~~vri~l~N~~~-~~H 190 (276)
T 3kw8_A 136 ---VIVRRKGDVLP---DAT-----HT--------IVFNDMTINNRKPH-----TGPDFEATVGDRVEIVMITHGE-YYH 190 (276)
T ss_dssp ---EEEECTTCCCC---SEE-----EE--------EEEETTEETTCCTT-----CCCCEEEETTCEEEEEEEEESS-CCE
T ss_pred ---EEEecCCCccc---ccc-----eE--------EEecccccceeccc-----CCCCEEEecCCEEEEEEecCCC-cce
Confidence 22222110000 000 00 00011344554321 2377999999999999999996 589
Q ss_pred EEEEcCCeeEEEEecCceec----eeEeeeEEecCCccccccc
Q 047904 224 FFSIANHTLKVVEADVVYVK----PFETETLLIAPGQTTNGTF 262 (448)
Q Consensus 224 ~~~idgh~~~Vva~DG~~v~----P~~~~~i~i~~GeRydv~~ 262 (448)
.|||+||.|+|++ ||.... +..+|++.|.||||+++.+
T Consensus 191 p~HlHG~~f~v~~-~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~ 232 (276)
T 3kw8_A 191 TFHMHGHRWADNR-TGILTGPDDPSRVIDNKITGPADSFGFQI 232 (276)
T ss_dssp EEEETTCCEESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEE
T ss_pred eEEEccceeEEec-cCccCCCcccccCCccEEeCCCceEEEEE
Confidence 9999999999976 776442 4678999999999999754
No 24
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.97 E-value=5.5e-31 Score=272.29 Aligned_cols=201 Identities=23% Similarity=0.288 Sum_probs=153.1
Q ss_pred eeceeEEEEEEEEEEe-------------eCCcCCCceEEEecCCee-------------eecccCCCCCCCCCCccccC
Q 047904 30 AFGITRHYEFDIKLQN-------------LNGKFPGPRIVAREGDQL-------------HGIRRLRSGWADGPAYITQC 83 (448)
Q Consensus 30 ~~~~~~~~~l~i~~~~-------------~NG~~PGP~I~v~~Gd~v-------------HGl~~~~~~~~DGvp~vtq~ 83 (448)
+.+++++|+|++++.+ |||++|||+|+|++||+| |-+|..+...+||++.++
T Consensus 24 ~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~~dG~~~~~-- 101 (442)
T 2zoo_A 24 DHSAKVVINLETREQVGRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTGPGGGAESS-- 101 (442)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCSGGGGGGGC--
T ss_pred CCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcCCCCCCccE--
Confidence 4678899999999875 999999999999999998 333333333479988754
Q ss_pred CCCCCCeeEEEEEeCCccceeEEeecCCCC---------------C-------ccc---ccCCCccCCHHH-------HH
Q 047904 84 PIQTGQSCVYNFTIVGRRGKLWWHAHMTCL---------------P-------LWE---SAGEWFNGGPKA-------II 131 (448)
Q Consensus 84 pI~PG~~ftY~f~~~~~~GT~wYH~H~~~~---------------P-------~~e---~~~d~~~~~~~~-------~~ 131 (448)
+|+||++|+|+|++ +++||||||||.+.. | ++| +++||++.+... .+
T Consensus 102 ~i~pg~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~~~~~ 180 (442)
T 2zoo_A 102 FTAPGHTSTFNFKA-LNPGLYIYHCATAPVGMHIANGMYGLILVEPKEGLAPVDREYYLVQGDFYTKGEFGEAGLQPFDM 180 (442)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCCCCCSEEEEEEEEEECBSSCTTCCEEECBCH
T ss_pred EECCCCEEEEEEEc-CCCeEEEEecCCCChHHHHhCccEEEEEEeCCCCCCCCCceEEEEeeeeeccCcccccccccCCh
Confidence 69999999999998 889999999986432 1 334 777887654210 00
Q ss_pred HHHHhcCCCCCCCccEEecCCCCCCCCCCcccccccccchhcccccccccceeecccccccccCcccceEEEEeCCcEEE
Q 047904 132 NQALQTGGGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYL 211 (448)
Q Consensus 132 ~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~R 211 (448)
... .+ .+++.++|||+.. |. . ..+.+++++|++||
T Consensus 181 ~~~--~~---~~~~~~liNG~~~----~~-----------------------------------~-~~~~l~v~~G~~vr 215 (442)
T 2zoo_A 181 AKA--ID---EDADYVVFNGSVG----ST-----------------------------------T-DENSLTAKVGETVR 215 (442)
T ss_dssp HHH--HT---TCCSEEEETTSTT----TT-----------------------------------S-GGGCEEEETTCEEE
T ss_pred hHh--cc---CCCCEEEECCCcC----CC-----------------------------------C-CCCceEeCCCCEEE
Confidence 010 01 2456667777632 10 0 11568999999999
Q ss_pred EEEEeccCCCeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCccccccc------------------CCcceEEEEEE
Q 047904 212 LRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGTF------------------DNSTVAGILEY 273 (448)
Q Consensus 212 lRliNa~~~~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeRydv~~------------------~~~~~~aiL~Y 273 (448)
|||+|+|....+.|+|+||.|+||+.||.+++|..++++.|.||||+|+.+ ......|+|+|
T Consensus 216 lrliN~~~~~~~~~~i~g~~~~vi~~DG~~~~p~~~~~~~l~pg~r~~v~v~~~~~G~y~~~~~~~~~~~~~g~~a~l~v 295 (442)
T 2zoo_A 216 LYIGNGGPNLVSSFHVIGEIFDTVYVEGGSLKNHNVQTTLIPAGGAAIVEFKVEVPGTFILVDHSIFRAFNKGALAMLKV 295 (442)
T ss_dssp EEEEEEESSCCEEEEEETCCBSEEEGGGSSCEECSBSEEEECTTEEEEEEEECCSCEEEEEEESSTHHHHTTSCEEEEEE
T ss_pred EEEEeCCCCCceeeEEcCCEEEEEecCCccCCCccceEEEECCCeeEEEEEEcCCCCeEEEEecccccccccCceEEEEe
Confidence 999999988999999999999999999999999999999999999999621 12356899999
Q ss_pred eCCCC
Q 047904 274 ERPPN 278 (448)
Q Consensus 274 ~~~~~ 278 (448)
.+...
T Consensus 296 ~~~~~ 300 (442)
T 2zoo_A 296 EGPDD 300 (442)
T ss_dssp ESCCC
T ss_pred cCCCC
Confidence 87653
No 25
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.97 E-value=7.5e-31 Score=259.13 Aligned_cols=185 Identities=16% Similarity=0.203 Sum_probs=135.3
Q ss_pred cCceeceeEEEEEEEEEEe----------eCCcCCCceEEEecCCee----------------eecccCCCCCCCCCCcc
Q 047904 27 AEPAFGITRHYEFDIKLQN----------LNGKFPGPRIVAREGDQL----------------HGIRRLRSGWADGPAYI 80 (448)
Q Consensus 27 ~~~~~~~~~~~~l~i~~~~----------~NG~~PGP~I~v~~Gd~v----------------HGl~~~~~~~~DGvp~v 80 (448)
.+++.+.+|+++|.+.... .||++|||+|||++||+| ||++++. .+||++ +
T Consensus 6 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~--~~dG~~-~ 82 (313)
T 3tas_A 6 TAPAGGEVKRIKLYAERLGGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYEI--SSDGTK-Q 82 (313)
T ss_dssp BCCCCCCEEEEEEEEEECGGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCST-T
T ss_pred cCCCCceEEEEEEEEEEcCCCceeeeeecCCccccCCeEEEECCCEEEEEEEECCCCCccEeecCCcCCc--cCCCCc-c
Confidence 4567788999999875322 799999999999999999 9999876 599998 5
Q ss_pred ccCCCCCCCeeEEEEEeC------------CccceeEEeecCCCCCccc------ccCCCccCCHHHHHHHHHhcCCCCC
Q 047904 81 TQCPIQTGQSCVYNFTIV------------GRRGKLWWHAHMTCLPLWE------SAGEWFNGGPKAIINQALQTGGGPN 142 (448)
Q Consensus 81 tq~pI~PG~~ftY~f~~~------------~~~GT~wYH~H~~~~P~~e------~~~d~~~~~~~~~~~~~~~~g~~~~ 142 (448)
+||+|+||++|+|+|++. .++||||||||..++.+.. +.+-
T Consensus 83 ~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~--------------------- 141 (313)
T 3tas_A 83 SRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGP--------------------- 141 (313)
T ss_dssp TTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEE---------------------
T ss_pred ccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCc---------------------
Confidence 999999999999999862 3679999999998762110 2222
Q ss_pred CCccEEecCCCCCCCCCCcccccccccchhcccccccccceeecccccccccCcccceEEEEeCCcEEEEEEEeccCCCe
Q 047904 143 ASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAALNDE 222 (448)
Q Consensus 143 ~~d~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRliNa~~~~~ 222 (448)
++|..++...++ .+. .+..+-+++||+... ..+.+.++.|++|||||+|++ ...
T Consensus 142 ----liV~~~~~~~~d---~e~-------------~l~~~d~t~Ng~~~~-----~~~~l~v~~Ge~vr~~liN~g-~~~ 195 (313)
T 3tas_A 142 ----VIVRRKGDVLPD---RTH-------------TIVFNDMTINNRPAH-----TGPDFEATVGDRVEFVMITHG-EYY 195 (313)
T ss_dssp ----EEEECTTCBCCS---EEE-------------EEEEETTEETTCCTT-----CCCCEEEETTCEEEEEEEEES-SCC
T ss_pred ----eEeecccccccc---ccc-------------eeeccchhcccCCcc-----cccccccccCCEEEEEEeccc-ccc
Confidence 222221100000 000 000011233443321 226799999999999999999 467
Q ss_pred EEEEEcCCeeEEEEecCceec---eeEeeeEEecCCcccccc
Q 047904 223 LFFSIANHTLKVVEADVVYVK---PFETETLLIAPGQTTNGT 261 (448)
Q Consensus 223 ~~~~idgh~~~Vva~DG~~v~---P~~~~~i~i~~GeRydv~ 261 (448)
+.|||+||.|+|++.||.... |..+|++.|.||||+++.
T Consensus 196 hpfHlHGh~F~v~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~ 237 (313)
T 3tas_A 196 HTFHLHGHRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQ 237 (313)
T ss_dssp EEEEETTCCEESSTTSSCCSTTCCCCEESEEEECTTCEEEEE
T ss_pred eeeeecCCeeEEEEECCccCCCCCCeeeeEEEeCCCcceEEE
Confidence 999999999999999998773 778999999999999963
No 26
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.97 E-value=1.4e-30 Score=255.35 Aligned_cols=190 Identities=17% Similarity=0.198 Sum_probs=134.3
Q ss_pred cCceeceeEEEEEEEEEEe----------eCCcCCCceEEEecCCee----------------eecccCCCCCCCCCCcc
Q 047904 27 AEPAFGITRHYEFDIKLQN----------LNGKFPGPRIVAREGDQL----------------HGIRRLRSGWADGPAYI 80 (448)
Q Consensus 27 ~~~~~~~~~~~~l~i~~~~----------~NG~~PGP~I~v~~Gd~v----------------HGl~~~~~~~~DGvp~v 80 (448)
+..+.+.+|+|++.+.+.. .||++|||+|||++||+| ||++++. +|||++ +
T Consensus 22 p~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~~--~~DG~~-~ 98 (299)
T 3t9w_A 22 PVRAQGTTRRITMYAEKISDELYGYGLAPGGATVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYDV--NSDGTL-M 98 (299)
T ss_dssp -----CCEEEEEEEEEEEETTEEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCCT-T
T ss_pred CcccCCCEEEEEEEEEecCCCceeeeecCCCCCccCceEEEECCeEEEEEEEECCCCCccEEeCCcccCC--ccCCCc-c
Confidence 4556889999999998665 699999999999999999 9999875 599997 8
Q ss_pred ccCCCCCCCeeEEEEEeC------------CccceeEEeecCCCCCcccccCCCccCCHHHHHHHHHhcCCCCCCCccEE
Q 047904 81 TQCPIQTGQSCVYNFTIV------------GRRGKLWWHAHMTCLPLWESAGEWFNGGPKAIINQALQTGGGPNASDAFT 148 (448)
Q Consensus 81 tq~pI~PG~~ftY~f~~~------------~~~GT~wYH~H~~~~P~~e~~~d~~~~~~~~~~~~~~~~g~~~~~~d~~l 148 (448)
+||+|+||++|+|+|+++ .++||||||||..++.+.. .++ ..|. ...++
T Consensus 99 ~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~----------~~~-----~~GL----~G~li 159 (299)
T 3t9w_A 99 NGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGT----------EGV-----LKGL----YGALV 159 (299)
T ss_dssp TTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCH----------HHH-----HHTC----EEEEE
T ss_pred ccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccch----------hhh-----cccc----cceEE
Confidence 999999999999999974 2689999999988752110 000 0110 01122
Q ss_pred ecCCCCCCCCCCcccccccccchhcccccccccceeecccccccccCcccceEEEEeCCcEEEEEEEeccCCCeEEEEEc
Q 047904 149 INGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAALNDELFFSIA 228 (448)
Q Consensus 149 iNG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRliNa~~~~~~~~~id 228 (448)
|..++....+ .+. .+..+.+.+||+... ..+.++++.|+++||||+|++. ..+.|||+
T Consensus 160 V~~~~~~~~d---~e~-------------~l~~~~~~~Ng~~~~-----~~p~l~v~~Ge~Vr~~liN~~~-~~HpfHlH 217 (299)
T 3t9w_A 160 VRRQGDLLPK---RQF-------------TVVFNDMMINNRAHH-----DAPTFEANLGERVEWIAIGHGS-NFHTFHLH 217 (299)
T ss_dssp EECTTCCCCS---EEE-------------EEEEETTEETTCCTT-----CCCEEEEETTCEEEEEEEEESS-CCCEEEET
T ss_pred EecccccCcc---ccc-------------eeeeeeeeecCcccc-----ccccceecCCCEEEEEEEeccc-cceeeeEe
Confidence 2222100000 000 011122344544322 2378999999999999999995 56899999
Q ss_pred CCeeEEEEecCceec---eeEeeeEEecCCccccc
Q 047904 229 NHTLKVVEADVVYVK---PFETETLLIAPGQTTNG 260 (448)
Q Consensus 229 gh~~~Vva~DG~~v~---P~~~~~i~i~~GeRydv 260 (448)
||.|+|+..|+.... +..+|++.|.||||+++
T Consensus 218 Gh~F~v~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~ 252 (299)
T 3t9w_A 218 GHRWLDNRTGMRTSEYDPSPLIDIKDLNPGVSFGF 252 (299)
T ss_dssp TCCEESSSSSSCCSTTCCCCEESEEECCTTCEEEE
T ss_pred cceEEEEecccccCCcCCCCceeeEEeCCceeEEE
Confidence 999999999988774 34689999999999996
No 27
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.96 E-value=2.5e-29 Score=250.53 Aligned_cols=183 Identities=21% Similarity=0.263 Sum_probs=134.9
Q ss_pred ceeceeEEEEEEEEEEe-------------eCCcCCCceEEEecCCee-------------eecccCCCCCCCCCCcccc
Q 047904 29 PAFGITRHYEFDIKLQN-------------LNGKFPGPRIVAREGDQL-------------HGIRRLRSGWADGPAYITQ 82 (448)
Q Consensus 29 ~~~~~~~~~~l~i~~~~-------------~NG~~PGP~I~v~~Gd~v-------------HGl~~~~~~~~DGvp~vtq 82 (448)
.+.+++++|+|++++.+ |||++|||+|+|++||+| ||+++++...+||.++++|
T Consensus 27 ~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~~~~~~~~~~~ 106 (333)
T 1mzy_A 27 ASGPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINPPENTMPHNIDFHAATGALGGGGLTL 106 (333)
T ss_dssp SSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECTTCCSCBCCEETTSCSGGGGGGGCC
T ss_pred CCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEECCCCcccccceecCCCCCCCCCceeE
Confidence 34678999999998875 999999999999999999 9999987656777777775
Q ss_pred CCCCCCCeeEEEEEeCCccceeEEeecCCC-----C------------C--------------ccc---ccCCCccCCH-
Q 047904 83 CPIQTGQSCVYNFTIVGRRGKLWWHAHMTC-----L------------P--------------LWE---SAGEWFNGGP- 127 (448)
Q Consensus 83 ~pI~PG~~ftY~f~~~~~~GT~wYH~H~~~-----~------------P--------------~~e---~~~d~~~~~~- 127 (448)
|+||++|+|+|++ .++||||||||.++ + | |+| +++||++...
T Consensus 107 --i~PG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~~~~~ 183 (333)
T 1mzy_A 107 --INPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPVRYDTVYYIGESDHYIPKDE 183 (333)
T ss_dssp --BCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCBCT
T ss_pred --eCCCCEEEEEEEC-CCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCCccchheeeeeeeeccCccc
Confidence 9999999999998 78999999999975 2 1 122 5677766210
Q ss_pred -HH---------HHH---HHHhcCCCCCCCccEEecCCCCCCCCCCcccccccccchhcccccccccceeeccccccccc
Q 047904 128 -KA---------IIN---QALQTGGGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEM 194 (448)
Q Consensus 128 -~~---------~~~---~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ng~~~~~~ 194 (448)
.. .+. ..+ .+ ..++.++|||+.+.+.
T Consensus 184 ~g~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~ING~~~~~~------------------------------------- 222 (333)
T 1mzy_A 184 DGTYMRFSDPSEGYEDMVAVM-DT---LIPSHIVFNGAVGALT------------------------------------- 222 (333)
T ss_dssp TSCBCCCSSHHHHHHHHHHHH-TT---TCCSEEEETTSTTTTS-------------------------------------
T ss_pred cccccccccccccccchhHHh-hc---cCCcEEEECCcccccC-------------------------------------
Confidence 00 000 000 11 2345666666542110
Q ss_pred CcccceEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEecCceece-e-EeeeEEecCCccccc
Q 047904 195 NAGRDMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKP-F-ETETLLIAPGQTTNG 260 (448)
Q Consensus 195 ~~~~~~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~DG~~v~P-~-~~~~i~i~~GeRydv 260 (448)
..+.++|++||+||||++|++....+. .+++|.|+|++ ||.+++| . .++++.|.||||+|+
T Consensus 223 ---~~~~l~v~~Ger~Rl~n~~~~~~~~~h-~i~~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v 285 (333)
T 1mzy_A 223 ---GEGALKAKVGDNVLFVHSQPNRDSRPH-LIGGHGDLVWE-TGKFHNAPERDLETWFIRGGTAGAA 285 (333)
T ss_dssp ---GGGCEEEETTCEEEEEEEESSSCBCEE-EETCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEE
T ss_pred ---CCcceEecCCCEEEEEECCCCCccccE-EECCCCeEEEe-CCcccCCCccCcceEEECCCceEEE
Confidence 015699999999988777666443343 38999999999 9999974 4 589999999999997
No 28
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.96 E-value=2.7e-29 Score=250.54 Aligned_cols=194 Identities=23% Similarity=0.246 Sum_probs=133.0
Q ss_pred eceeEEEEEEEEEEe--------------eCCcCCCceEEEecCCee-------------eecccCCCCCCCCCCccccC
Q 047904 31 FGITRHYEFDIKLQN--------------LNGKFPGPRIVAREGDQL-------------HGIRRLRSGWADGPAYITQC 83 (448)
Q Consensus 31 ~~~~~~~~l~i~~~~--------------~NG~~PGP~I~v~~Gd~v-------------HGl~~~~~~~~DGvp~vtq~ 83 (448)
.+++++|+|++++.. |||++|||+|+|++||+| ||+++.+..++||++.++|
T Consensus 29 ~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~~~~~~~~~~- 107 (336)
T 1oe1_A 29 GPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATGALGGAKLTN- 107 (336)
T ss_dssp CCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTTCCSCBCCEETTSCSGGGGGGGCC-
T ss_pred CCcEEEEEEEEEEEEEEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCCCCCccccceECCCCCCCCCcceEE-
Confidence 567899999998875 999999999999999999 9999998888888888876
Q ss_pred CCCCCCeeEEEEEeCCccceeEEeecCCCC----------------C--------------ccc---ccCCCccCCHHHH
Q 047904 84 PIQTGQSCVYNFTIVGRRGKLWWHAHMTCL----------------P--------------LWE---SAGEWFNGGPKAI 130 (448)
Q Consensus 84 pI~PG~~ftY~f~~~~~~GT~wYH~H~~~~----------------P--------------~~e---~~~d~~~~~~~~~ 130 (448)
|+||++|+|+|++ .++||||||||.++. | |.| +++||++....
T Consensus 108 -i~pG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~~D~e~~l~~~D~~~~~~~-- 183 (336)
T 1oe1_A 108 -VNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYDRAYTIGEFDLYIPKGP-- 183 (336)
T ss_dssp -BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCBCT--
T ss_pred -eCCCCEEEEEEEC-CCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcccCCceeEeeeeeeeecccc--
Confidence 9999999999998 789999999998753 1 122 44666653100
Q ss_pred HHHHHhcCCCCCCCccEEecCCCCCCCCCCcccccccccchhcccccccccceeecccccccccCcccceEEEEeCCcEE
Q 047904 131 INQALQTGGGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTY 210 (448)
Q Consensus 131 ~~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~ 210 (448)
+|+-. .|.... ..+.-.........++.+++||+....|. .+.++|++|++|
T Consensus 184 -------------------~g~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~liNG~~~~~~~---~~~l~v~~Gerv 235 (336)
T 1oe1_A 184 -------------------DGKYK-DYATLA-----ESYGDTVQVMRTLTPSHIVFNGKVGALTG---ANALTAKVGETV 235 (336)
T ss_dssp -------------------TSSBC-CCSSTG-----GGHHHHHHHHHTTCCSEEEETTSTTTTSG---GGCEEEETTCEE
T ss_pred -------------------CCcee-eccccc-----ccccchhhHhhcCCCCEEEECCeeccCCC---CcceEcCCCCEE
Confidence 00000 000000 00000000000112344444544322211 267999999977
Q ss_pred EEEEEeccCCCeEEEE-EcCCeeEEEEecCceecee--EeeeEEecCCccccc
Q 047904 211 LLRIINAALNDELFFS-IANHTLKVVEADVVYVKPF--ETETLLIAPGQTTNG 260 (448)
Q Consensus 211 RlRliNa~~~~~~~~~-idgh~~~Vva~DG~~v~P~--~~~~i~i~~GeRydv 260 (448)
|| +|++..+.+.|+ |++|.|+|++ ||.+++|. .++++.|++|||||+
T Consensus 236 Rl--in~~~~~~~~~~~i~gh~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dv 285 (336)
T 1oe1_A 236 LL--IHSQANRDTRPHLIGGHGDWVWE-TGKFANPPQRDLETWFIRGGSAGAA 285 (336)
T ss_dssp EE--EEEESSSCBCEEETTCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEE
T ss_pred EE--EecCCCCccceEEECCcCceEeC-CCcCcCCccccceEEEECCCCcEEE
Confidence 65 667666666544 6999999997 99999864 478999999999997
No 29
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.95 E-value=1.1e-27 Score=239.04 Aligned_cols=187 Identities=16% Similarity=0.181 Sum_probs=131.4
Q ss_pred eceeEEEEEEEEEEe----------eCCcCCCceEEEecCCee----------------eecccCCCCCCCCCCccccCC
Q 047904 31 FGITRHYEFDIKLQN----------LNGKFPGPRIVAREGDQL----------------HGIRRLRSGWADGPAYITQCP 84 (448)
Q Consensus 31 ~~~~~~~~l~i~~~~----------~NG~~PGP~I~v~~Gd~v----------------HGl~~~~~~~~DGvp~vtq~p 84 (448)
.+++++|+|++++.. +||++|||+|+|++||+| ||++++ .++||++ ++||+
T Consensus 45 ~g~~~~~~l~~~~~~~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~--~~~DG~~-~t~~~ 121 (343)
T 3cg8_A 45 GGEVRHLKMYAEKLADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYE--ISSDGTA-MNKSD 121 (343)
T ss_dssp CCCEEEEEEEEEECGGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCT-TTTCS
T ss_pred CCeEEEEEEEEEEccCCeeeeeeecCCCCccCCEEEEECCCEEEEEEEECCCCCeeEEecCcccC--CcCCCcc-ccccc
Confidence 578899999999832 589999999999999999 999987 4799999 89999
Q ss_pred CCCCCeeEEEEEeCC------------ccceeEEeecCCCCCcccccCCCccCCHHHHHHHHHhcCCCCCCCccEEecCC
Q 047904 85 IQTGQSCVYNFTIVG------------RRGKLWWHAHMTCLPLWESAGEWFNGGPKAIINQALQTGGGPNASDAFTINGL 152 (448)
Q Consensus 85 I~PG~~ftY~f~~~~------------~~GT~wYH~H~~~~P~~e~~~d~~~~~~~~~~~~~~~~g~~~~~~d~~liNG~ 152 (448)
|+||++|+|+|++.+ ++||||||||..+.+... .++ ..|. ...++|..+
T Consensus 122 I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~----------~~~-----~~Gl----~G~~iV~~~ 182 (343)
T 3cg8_A 122 VEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGT----------GGI-----RNGL----YGPVIVRRK 182 (343)
T ss_dssp BCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCH----------HHH-----HHTC----EEEEEEECT
T ss_pred ccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccch----------hhh-----hcCC----eEEEEEecC
Confidence 999999999999832 359999999986531100 000 0110 011222221
Q ss_pred CCCCCCCCcccccccccchhcccccccccceeecccccccccCcccceEEEEeCCcEEEEEEEeccCCCeEEEEEcCCee
Q 047904 153 SGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAALNDELFFSIANHTL 232 (448)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~ 232 (448)
.....+ .+ +. +..+-+++||+... ..+.++++.||+|||||+|.+. ..+.|||+||.|
T Consensus 183 ~~~~pd---~e-----~~--------l~~~d~~iNG~~~~-----~~~~l~v~~Ge~vri~l~N~g~-~~HpfHlHGh~f 240 (343)
T 3cg8_A 183 GDVLPD---AT-----HT--------IVFNDMTINNRKPH-----TGPDFEATVGDRVEIVMITHGE-YYHTFHMHGHRW 240 (343)
T ss_dssp TCCCCS---EE-----EE--------EEEETTEETTCCTT-----CCCCEEEETTCEEEEEEEEESS-CCEEEEETTCCE
T ss_pred CCCCCC---ce-----EE--------EEcccceecccCCC-----CCccEEeCCCCEEEEEEEcCCc-cccccEecCcEE
Confidence 100000 00 00 00011355655421 1267999999999999999995 689999999999
Q ss_pred EEEEecCceec----eeEeeeEEecCCccccccc
Q 047904 233 KVVEADVVYVK----PFETETLLIAPGQTTNGTF 262 (448)
Q Consensus 233 ~Vva~DG~~v~----P~~~~~i~i~~GeRydv~~ 262 (448)
+|+ .||.+.. +...|++.|.||||+++.+
T Consensus 241 ~v~-~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~ 273 (343)
T 3cg8_A 241 ADN-RTGILTGPDDPSRVIDNKITGPADSFGFQI 273 (343)
T ss_dssp ESS-SSSSCCSTTCCCCEESEEEECTTCEEEEEE
T ss_pred EEe-ccCcccCCCCcccceeeEEeCCCCEEEEEE
Confidence 998 4776553 3568999999999999854
No 30
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.95 E-value=1.3e-27 Score=238.69 Aligned_cols=184 Identities=21% Similarity=0.250 Sum_probs=130.5
Q ss_pred ceeceeEEEEEEEEEEe--------------eCCcCCCceEEEecCCee-------------eecccCCCCCCCCCCccc
Q 047904 29 PAFGITRHYEFDIKLQN--------------LNGKFPGPRIVAREGDQL-------------HGIRRLRSGWADGPAYIT 81 (448)
Q Consensus 29 ~~~~~~~~~~l~i~~~~--------------~NG~~PGP~I~v~~Gd~v-------------HGl~~~~~~~~DGvp~vt 81 (448)
.+.+++++|+|++++.. |||++|||+|+|++||+| ||+++.+....||++.++
T Consensus 33 ~~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~~~~~~~~~ 112 (340)
T 2bw4_A 33 KTGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPDTNTLLHNIDFHAATGALGGGALT 112 (340)
T ss_dssp SSSCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECTTCCSCBCCEETTSCSGGGGGGGC
T ss_pred cCCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCCCCCccCcceeCCcCCCCCCccce
Confidence 34678999999998875 999999999999999999 999988765555666666
Q ss_pred cCCCCCCCeeEEEEEeCCccceeEEeecCCCC----------------C--------------ccc---ccCCCccC-C-
Q 047904 82 QCPIQTGQSCVYNFTIVGRRGKLWWHAHMTCL----------------P--------------LWE---SAGEWFNG-G- 126 (448)
Q Consensus 82 q~pI~PG~~ftY~f~~~~~~GT~wYH~H~~~~----------------P--------------~~e---~~~d~~~~-~- 126 (448)
| |+||++|+|+|++ .++||||||||.++. | ++| +++||++. +
T Consensus 113 ~--i~PG~~~~y~~~~-~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~~~~~ 189 (340)
T 2bw4_A 113 Q--VNPGEETTLRFKA-TKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPLTYDKIYYVGEQDFYVPKDE 189 (340)
T ss_dssp C--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEECCSEEEEEEEEEECCCBCT
T ss_pred E--eCCCCEEEEEEEC-CCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCcCcceeEEEeeeeeeecccc
Confidence 5 9999999999998 689999999998752 1 122 45677652 1
Q ss_pred HH---------HHHHHHH--hcCCCCCCCccEEecCCCCCCCCCCcccccccccchhcccccccccceeecccccccccC
Q 047904 127 PK---------AIINQAL--QTGGGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMN 195 (448)
Q Consensus 127 ~~---------~~~~~~~--~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ng~~~~~~~ 195 (448)
.. ....... ..+ ..++.++|||+.. ...
T Consensus 190 ~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~iNG~~~-------------------------------------~~~- 228 (340)
T 2bw4_A 190 AGNYKKYETPGEAYEDAVKAMRT---LTPTHIVFNGAVG-------------------------------------ALT- 228 (340)
T ss_dssp TSCBCCCCSHHHHHHHHHHHHHT---TCCSEEEETTSTT-------------------------------------TTS-
T ss_pred CCcccccccccccccchhhHhhc---CCCCEEEECCccC-------------------------------------Ccc-
Confidence 00 0000000 001 1345566666532 100
Q ss_pred cccceEEEEeCCcEEEEEEEeccCCCeEEE-EEcCCeeEEEEecCceec-ee-EeeeEEecCCcccccc
Q 047904 196 AGRDMILKVKPGKTYLLRIINAALNDELFF-SIANHTLKVVEADVVYVK-PF-ETETLLIAPGQTTNGT 261 (448)
Q Consensus 196 ~~~~~~i~v~~G~~~RlRliNa~~~~~~~~-~idgh~~~Vva~DG~~v~-P~-~~~~i~i~~GeRydv~ 261 (448)
..+.++|++||++|||++|++ +.+.| ++++|.|+|++ ||.++. |. .++++.|.+|||||+.
T Consensus 229 --~~~~l~v~~G~r~Rl~n~~~~--~~~~~~~i~gh~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~ 292 (340)
T 2bw4_A 229 --GDHALTAAVGERVLVVHSQAN--RDTRPHLIGGHGDYVWA-TGKFRNPPDLDQETWLIPGGTAGAAF 292 (340)
T ss_dssp --GGGCEEEETTCEEEEEEEESS--SCBCEEEETCCEEEEET-TCCTTSCCEEEESCCCBCTTEEEEEE
T ss_pred --CCCceEcCCCCEEEEEECCCC--CccceEEecCcceEEeC-CCcccCCccccceEEEeCCCceEEEE
Confidence 026799999998876666554 33333 48999999997 999986 43 5899999999999973
No 31
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.95 E-value=1.2e-27 Score=258.17 Aligned_cols=165 Identities=15% Similarity=0.124 Sum_probs=109.9
Q ss_pred eCCcCCCceEEEecCCee----------------eecccCCCCCCCCCCccc--------cCCCCCCCeeEEEEEeCCc-
Q 047904 46 LNGKFPGPRIVAREGDQL----------------HGIRRLRSGWADGPAYIT--------QCPIQTGQSCVYNFTIVGR- 100 (448)
Q Consensus 46 ~NG~~PGP~I~v~~Gd~v----------------HGl~~~~~~~~DGvp~vt--------q~pI~PG~~ftY~f~~~~~- 100 (448)
.|+++|||+|+|++||+| ||++++. +|||+|+++ ||+|+||++|+|+|+++++
T Consensus 62 ~~~~~pGP~I~~~~Gd~v~v~~~N~l~~~~siH~HGl~~~~--~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~ 139 (647)
T 1sdd_B 62 EHLGILGPVIRAEVDDVIQVRFKNLASRPYSLHAHGLSYEK--SSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRS 139 (647)
T ss_dssp GGGTTSCCCEEEETTCEEEEEECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTT
T ss_pred cccCCcCceEEEeCCCEEEEEEEECCCCceEEecCcceeCC--CCCCccccCCCCcccccCcccCCCCeEEEEEECCccc
Confidence 377999999999999999 9999875 699999987 9999999999999999654
Q ss_pred ----cc----eeEEeecCCCC---------------C------------ccc---ccC------CCccCCHHHHHHHHHh
Q 047904 101 ----RG----KLWWHAHMTCL---------------P------------LWE---SAG------EWFNGGPKAIINQALQ 136 (448)
Q Consensus 101 ----~G----T~wYH~H~~~~---------------P------------~~e---~~~------d~~~~~~~~~~~~~~~ 136 (448)
+| |||||||.+.. + ++| +++ ||++.+....
T Consensus 140 gp~~~G~~c~T~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~------ 213 (647)
T 1sdd_B 140 GPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTR------ 213 (647)
T ss_dssp SCCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC-----------
T ss_pred CCCCCCCCceEEEEccCCCCcccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCccc------
Confidence 57 99999999632 0 012 333 3443321100
Q ss_pred cCCCCCCCccEEecCCCCCCCCCCcccccccccchhcccccccccceeecccccccccCcccceEEEEeCCcEEEEEEEe
Q 047904 137 TGGGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIIN 216 (448)
Q Consensus 137 ~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRliN 216 (448)
.+.. ........++.+++||+.. +.+.++|++|++|||||||
T Consensus 214 -------------------------------~~~~-~~~~~~~~~~~~~iNG~~~------~~p~l~v~~G~~vrlrliN 255 (647)
T 1sdd_B 214 -------------------------------SWRR-ASSEVKNSHEFHAINGMIY------NLPGLRMYEQEWVRLHLLN 255 (647)
T ss_dssp ------------------------------------------CCCEEEEETTBSS------CCCCCEEETTCEEEEEEEE
T ss_pred -------------------------------cccc-CCcchhhcCceeccCCEec------CCCCeEEcCCCEEEEEEEe
Confidence 0000 0000011245566666542 1267899999999999999
Q ss_pred ccCCC-eEEEEEcCCeeEEEEecCceeceeEeeeEEecCCcccccc
Q 047904 217 AALND-ELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGT 261 (448)
Q Consensus 217 a~~~~-~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeRydv~ 261 (448)
++... .+.||+|||.|+||+.|| ..++++.|.||||+++.
T Consensus 256 ~~~~~~~h~~hlhG~~f~vi~~d~-----~~~d~v~l~pg~r~~v~ 296 (647)
T 1sdd_B 256 LGGSRDIHVVHFHGQTLLENGTQQ-----HQLGVWPLLPGSFKTLE 296 (647)
T ss_dssp CCCTTCCEEEEETTCCEEECSSSC-----EEESSEEECTTEEEEEE
T ss_pred CCCCCcceeEEEcCcEEEEecCCC-----cccceEEECCCeEEEEE
Confidence 99764 899999999999999986 47899999999999984
No 32
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.94 E-value=1.2e-28 Score=242.77 Aligned_cols=198 Identities=12% Similarity=0.112 Sum_probs=119.2
Q ss_pred eceeEEEEEEEEEEe----eCCcCCCceEEEecCCee----------------eecc----cCCCCCCCCCCccc--cCC
Q 047904 31 FGITRHYEFDIKLQN----LNGKFPGPRIVAREGDQL----------------HGIR----RLRSGWADGPAYIT--QCP 84 (448)
Q Consensus 31 ~~~~~~~~l~i~~~~----~NG~~PGP~I~v~~Gd~v----------------HGl~----~~~~~~~DGvp~vt--q~p 84 (448)
.+..|+|+++++... +| ++|||+|+|++||+| ||++ +.+.+++||+++++ ||+
T Consensus 35 k~~~~~y~~~~~~~~~~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~~dG~~~~dg~~~~~~~~~~ 113 (306)
T 1sdd_A 35 KIVYREYEAYFQKEKPQSRTS-GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDA 113 (306)
T ss_dssp EEEEECCCTTTCCCCCCCSSC-CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTTTSCCCSCCCCCHHHHTTTC
T ss_pred EEEEEEeceeecccccccccC-CccCCEEEEeCCCEEEEEEEECCCCcccEeecceecccccCCCccCCCCcccccCCCc
Confidence 456677877665544 89 689999999999999 9999 45566666666666 799
Q ss_pred CCCCCeeEEEEEeCCc---------cceeEEeecCCCCC--cccccCCCccCCHHHHHHHHHhcCCCC-CCCccEEecCC
Q 047904 85 IQTGQSCVYNFTIVGR---------RGKLWWHAHMTCLP--LWESAGEWFNGGPKAIINQALQTGGGP-NASDAFTINGL 152 (448)
Q Consensus 85 I~PG~~ftY~f~~~~~---------~GT~wYH~H~~~~P--~~e~~~d~~~~~~~~~~~~~~~~g~~~-~~~d~~liNG~ 152 (448)
|+||++|+|+|+++++ +||||||||..... ...+.+-+...+..+. ...+... ...+..++-
T Consensus 114 I~PG~~~~Y~f~~~~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~----~~~~~~~~~d~e~~l~~-- 187 (306)
T 1sdd_A 114 VAPGQEYTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTL----TEDGTQKMFEKQHVLMF-- 187 (306)
T ss_dssp BCTTCEEEEEEECCGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCB----CTTSSBSSSCCCCCCBC--
T ss_pred cCCCCeEEEEEEeCCccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCC----CccCCcCcccceEEEEE--
Confidence 9999999999998544 37999999976420 0002222111110000 0000000 000111110
Q ss_pred CCCCCCCCcccccccccchhcccccccccceeecccccccccCcccceEEEEeCCcEEEEEEEeccCC-CeEEEEEcCCe
Q 047904 153 SGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAALN-DELFFSIANHT 231 (448)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRliNa~~~-~~~~~~idgh~ 231 (448)
..|+... ......++.+++||+..+ ..+.+++++|+++||||+|++.. ..+.|+++||.
T Consensus 188 --------------~d~d~~~-~~~~~~~~~~~ING~~~~-----~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~ 247 (306)
T 1sdd_A 188 --------------AVFDESK-SWNQTSSLMYTVNGYVNG-----TMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQV 247 (306)
T ss_dssp --------------CEEETTS-SSSCCCCEEECSSSCCSS-----CCCCCCCCCC------BBCCCSSSCEECCBCSSTT
T ss_pred --------------Eeccccc-ccccCCCcceeeCCEecC-----CCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcE
Confidence 0010000 000012456788887642 13678999999999999999986 56789999999
Q ss_pred eEEEEecCceeceeEeeeEEecCCcccccccC
Q 047904 232 LKVVEADVVYVKPFETETLLIAPGQTTNGTFD 263 (448)
Q Consensus 232 ~~Vva~DG~~v~P~~~~~i~i~~GeRydv~~~ 263 (448)
|++ || ..++++.|.||||+++.+.
T Consensus 248 ~~~---dG-----~~~dtv~l~pger~~v~~~ 271 (306)
T 1sdd_A 248 LEQ---NH-----HKISAITLVSATSTTANMT 271 (306)
T ss_dssp CEE---TT-----EECSCCCEETTCCBC----
T ss_pred eee---CC-----EEcceEEECCCcEEEEEEE
Confidence 875 88 3589999999999998553
No 33
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=99.94 E-value=8.1e-27 Score=241.39 Aligned_cols=207 Identities=15% Similarity=0.124 Sum_probs=123.9
Q ss_pred eeceeEEEEEEEEEEe---------eCCcCCCceEEEecCCee-----------eecccCCCCCCCCCCccccCCCCCCC
Q 047904 30 AFGITRHYEFDIKLQN---------LNGKFPGPRIVAREGDQL-----------HGIRRLRSGWADGPAYITQCPIQTGQ 89 (448)
Q Consensus 30 ~~~~~~~~~l~i~~~~---------~NG~~PGP~I~v~~Gd~v-----------HGl~~~~~~~~DGvp~vtq~pI~PG~ 89 (448)
+.+.+++++++++.+. |||++ ||+|+|++||+| |+++. +|....+||+|+||+
T Consensus 24 ~~~~~~~~~~~~~~~~~~f~g~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~~~h~~~~------~g~~~~~~~~i~pG~ 96 (447)
T 2dv6_A 24 HAPVVFTLRTGIAEGRMVYIGVGGDIDHKI-NPTLVVHEGETVQVNLVNGEGAQHDVVV------DQYAARSAIVNGKNA 96 (447)
T ss_dssp CCCEEEEEEEEEETTEEEEEEESGGGTTCB-SCCEEEETTCEEEEEEECSSSSCBCCEE------TTTTEECCCBCSTTB
T ss_pred CCCceEEEEEEecccEEEEeccceeecCCc-CCeEEEcCCCEEEEEEEcCCCCceEEEE------ccCCcccceecCCCC
Confidence 4567788888776532 99999 999999999998 66664 455566899999999
Q ss_pred eeEEEEEeCCccceeEEeecCCCCCcccccCCCccCCHHHH-H--H-HHHhcCCCCCCCccEEecCCCCCCCCCCccccc
Q 047904 90 SCVYNFTIVGRRGKLWWHAHMTCLPLWESAGEWFNGGPKAI-I--N-QALQTGGGPNASDAFTINGLSGSLYNRSAKEFQ 165 (448)
Q Consensus 90 ~ftY~f~~~~~~GT~wYH~H~~~~P~~e~~~d~~~~~~~~~-~--~-~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~ 165 (448)
+++|+|++ .++||||||||..++....|.+.....+.... . . .....+.. ..+. ++ +. ....
T Consensus 97 ~~~~~f~~-~~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~-~~p~--~~-d~-------~~~~-- 162 (447)
T 2dv6_A 97 SSTFSFVA-SKVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPA-DLPG--PI-GP-------RQAK-- 162 (447)
T ss_dssp EEEEEEEC-CSCEEEEEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTT-CSCC--CC-CS-------CCCC--
T ss_pred eEEEEEEc-CCCEEEEEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChh-hcCC--cc-cc-------CCCc--
Confidence 99999998 67999999999865411112221111000000 0 0 00000000 0000 00 00 0000
Q ss_pred ccccchh-----cccccccccceeecccccccccCcccceEEEEeCCcEEEEEEEeccC-CCeEEEEEcCCeeEEEEecC
Q 047904 166 VEDMIFE-----EKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAAL-NDELFFSIANHTLKVVEADV 239 (448)
Q Consensus 166 ~~~~~~~-----~~~~g~~~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRliNa~~-~~~~~~~idgh~~~Vva~DG 239 (448)
...+... ....+....+.+++||+.. .++|++++|++|||||+|.+. ...+.++++|. ++.||
T Consensus 163 ~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~p-------gp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~----~~~DG 231 (447)
T 2dv6_A 163 TVRIDLETVEVKGQLDDNTTYTYWTFNGKVP-------GPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGA----TGPGG 231 (447)
T ss_dssp EEEEEEEEEEEEEEEETTEEEEEEEETTBBS-------CCCEEEETTCEEEEEEEECTTCSSCBCCEETTC----CSGGG
T ss_pred EEEEEEEEEEEEEeccCCceeEEEEECCccC-------CCeEEecCCCEEEEEEEeCCCCceeEEEeeccc----cCCCC
Confidence 0000000 0001123456789999863 278999999999999999985 34567777763 36899
Q ss_pred ceeceeEeeeEEecCCcccccccCCcceEEEEEEeC
Q 047904 240 VYVKPFETETLLIAPGQTTNGTFDNSTVAGILEYER 275 (448)
Q Consensus 240 ~~v~P~~~~~i~i~~GeRydv~~~~~~~~aiL~Y~~ 275 (448)
.+ +.+.|.|||||++.+.... .+..-|..
T Consensus 232 ~~------~~~~i~pG~~~~~~~~~~~-~G~~~yh~ 260 (447)
T 2dv6_A 232 AA------AFTQTDPGEETVVTFKALI-PGIYVYHC 260 (447)
T ss_dssp GG------GGCCBCTTCEEEEEEECCS-CEEEEEEC
T ss_pred CC------ccEEeCCCCEEEEEEECCC-CeEEEEEe
Confidence 74 2345999999998664322 24455553
No 34
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=99.93 E-value=9.1e-26 Score=233.48 Aligned_cols=191 Identities=23% Similarity=0.227 Sum_probs=130.4
Q ss_pred eceeEEEEEEEEEEe-------------eCCcCCCceEEEecCCee-------------eecccCCCCCCCCCCccccCC
Q 047904 31 FGITRHYEFDIKLQN-------------LNGKFPGPRIVAREGDQL-------------HGIRRLRSGWADGPAYITQCP 84 (448)
Q Consensus 31 ~~~~~~~~l~i~~~~-------------~NG~~PGP~I~v~~Gd~v-------------HGl~~~~~~~~DGvp~vtq~p 84 (448)
.++++.|+|++.+.. |||++|||+|+|++||++ |-++..+...+||+|.++|
T Consensus 160 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~~~DG~~~~~~-- 237 (447)
T 2dv6_A 160 QAKTVRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGATGPGGAAAFTQ-- 237 (447)
T ss_dssp CCCEEEEEEEEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCCSGGGGGGGCC--
T ss_pred CCcEEEEEEEEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeeccccCCCCCCccEE--
Confidence 456677777654221 999999999999999999 3333333234899997665
Q ss_pred CCCCCeeEEEEEeCCccceeEEeecCCCC--------------------C--ccc---ccCCCccCCHHHHHHHHHhcCC
Q 047904 85 IQTGQSCVYNFTIVGRRGKLWWHAHMTCL--------------------P--LWE---SAGEWFNGGPKAIINQALQTGG 139 (448)
Q Consensus 85 I~PG~~ftY~f~~~~~~GT~wYH~H~~~~--------------------P--~~e---~~~d~~~~~~~~~~~~~~~~g~ 139 (448)
|.||++++|.|++ .++||||||||.... | ++| ++++|++....
T Consensus 238 i~pG~~~~~~~~~-~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~~P~~d~~~~~~~~~~~~~~~~----------- 305 (447)
T 2dv6_A 238 TDPGEETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGGLPQVDREFYVMQGEIYTVKSF----------- 305 (447)
T ss_dssp BCTTCEEEEEEEC-CSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTCSCCCSEEEEEEEEEECBSSCT-----------
T ss_pred eCCCCEEEEEEEC-CCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCCCCCCCeeEEEEecccccCCcc-----------
Confidence 9999999999998 789999999997421 1 111 23334332100
Q ss_pred CCCCCccEEecCCCCCCCCCCcccccccccchhcccccccccceeecccccccccCcccceEEEEeCCcEEEEEEEeccC
Q 047904 140 GPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAAL 219 (448)
Q Consensus 140 ~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRliNa~~ 219 (448)
.... ...++... ..+ ..++.+++||+....+ ....+++++|++|||||+|++.
T Consensus 306 ------------------~~~g----~~~~~~~~-~~~-~~~~~~~iNG~~~~~~---~~~~~~v~~g~~vrlrliN~~~ 358 (447)
T 2dv6_A 306 ------------------GTSG----EQEMDYEK-LIN-EKPEYFLFNGSVGSLT---RSHPLYASVGETVRIFFGVGGP 358 (447)
T ss_dssp ------------------TCCE----ECCBBHHH-HHT-TCCSEEEETTSTTCCC---CCCCEEECTTCEEEEEEEEEES
T ss_pred ------------------cccc----cccCChHH-hhc-cCCCEEEECCcccCCC---CCcceEECCCCEEEEEEEeCCC
Confidence 0000 00000000 000 1234556666543221 1146899999999999999998
Q ss_pred CCeEEEEEcCCeeEEEEecCceecee--EeeeEEecCCccccccc
Q 047904 220 NDELFFSIANHTLKVVEADVVYVKPF--ETETLLIAPGQTTNGTF 262 (448)
Q Consensus 220 ~~~~~~~idgh~~~Vva~DG~~v~P~--~~~~i~i~~GeRydv~~ 262 (448)
...+.|||+||.|+||+.||.+++|. .++++.|.+|||+++.+
T Consensus 359 ~~~h~~hlhGh~f~vv~~dG~~~~~p~~~~dtv~l~pg~r~~i~~ 403 (447)
T 2dv6_A 359 NFTSSFHVIGEIFDHVYSLGSVVSPPLIGVQTVSVPPGGATIVDF 403 (447)
T ss_dssp SCCEEEEEETCCEEEECGGGCSSSCCEEEESEEEECTTEEEEEEE
T ss_pred CceEeEEEcCcEEEEEEcCCcccCCCcccccEEEECCCcEEEEEE
Confidence 88999999999999999999999754 58999999999999843
No 35
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.92 E-value=2.1e-26 Score=251.04 Aligned_cols=194 Identities=11% Similarity=0.041 Sum_probs=122.4
Q ss_pred cCCCceEEEecCCee----------------eecccCCCCCCCCCCccccCCCCCCCeeEEEEEeCC---------ccce
Q 047904 49 KFPGPRIVAREGDQL----------------HGIRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVG---------RRGK 103 (448)
Q Consensus 49 ~~PGP~I~v~~Gd~v----------------HGl~~~~~~~~DGvp~vtq~pI~PG~~ftY~f~~~~---------~~GT 103 (448)
++|||+|||++||+| ||++++...+ ||+++ +||+|+||++|+|+|++++ ++||
T Consensus 195 ~~pGP~Ir~~~GD~v~v~~~N~l~~~~siH~HG~~~~~~~~-dG~~~-~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt 272 (770)
T 2r7e_B 195 GLLGPYIRAEVEDNIMVTFRNQASRPYSFYSSLISYEEDQR-QGAEP-RKNFVKPNETKTYFWKVQHHMAPTKDEFDCKA 272 (770)
T ss_dssp CSCCCCCCCCSSSCEEEEEECCSSSCCCCCBTTCCCCCCSS-SCTTT-TSSCCCSSCEEEEECCCCSSSSCCSSCCSEEE
T ss_pred CCCCCeEEEEcCCEEEEEEEECCCCCcceeecccccccccC-CCCcC-ccCccCCCCeEEEEEEecCccCCccCCCCCee
Confidence 579999999999999 9999998753 69998 9999999999999999854 8999
Q ss_pred eEEeecCCCCCc--ccccCCCccCCHHHHHHHHHhcCCCCCCCccEEec---CCCCCCCCCCcccccccccch---h---
Q 047904 104 LWWHAHMTCLPL--WESAGEWFNGGPKAIINQALQTGGGPNASDAFTIN---GLSGSLYNRSAKEFQVEDMIF---E--- 172 (448)
Q Consensus 104 ~wYH~H~~~~P~--~e~~~d~~~~~~~~~~~~~~~~g~~~~~~d~~liN---G~~~~~~~~~~~~~~~~~~~~---~--- 172 (448)
||||||.+.+.+ ..+.+-+...+.... . ...+.....-+..++- ......|... ....+.. .
T Consensus 273 ~wYHsh~~~~~q~~~GL~G~liV~~~~~~-~--~~~~~~~~d~E~vl~~~~~de~~swy~~~----~~~~~~~~p~~~~~ 345 (770)
T 2r7e_B 273 WAYSSDVDLEKDVHSGLIGPLLVCHTNTL-N--PAHGRQVTVQEFALFFTIFDETKSWYFTE----NMERNCRAPCNIQM 345 (770)
T ss_dssp EEECCCSSSSHHHHTSCCEEEEEECSTTS-C--SSSCCCCSSEEEECCCCEECCSSSSCTTG----GGSSCSCCSSCCCS
T ss_pred EEeeccCCcHHHHhCCceeeEEECCCccc-c--cccCCCccceEEEEEEeecCccccchhcc----chhhcccCcccccc
Confidence 999999987410 002111111110000 0 0000000000111110 0000000000 0000000 0
Q ss_pred cccccccccceeecccccccccCcccceEEEEeCCcEEEEEEEeccCC-CeEEEEEcCCeeEEEEecCceeceeEeeeEE
Q 047904 173 EKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAALN-DELFFSIANHTLKVVEADVVYVKPFETETLL 251 (448)
Q Consensus 173 ~~~~g~~~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRliNa~~~-~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~ 251 (448)
....-....+.+++||+..+ ..+.+++++|++|||||+|++.. ..+.|||+||.|+|++.||. .+|++.
T Consensus 346 ~d~~~~~~~~~~~ING~~~~-----~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~ 415 (770)
T 2r7e_B 346 EDPTFKENYRFHAINGYIMD-----TLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYN 415 (770)
T ss_dssp SSSSSTTTSCEECTTSCTTT-----TCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEE
T ss_pred CCccccccCCccccCCccCC-----CCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEE
Confidence 00000012345788888642 23668999999999999999965 47999999999999999973 789999
Q ss_pred ecCCcccccc
Q 047904 252 IAPGQTTNGT 261 (448)
Q Consensus 252 i~~GeRydv~ 261 (448)
|.||||+++.
T Consensus 416 l~Pg~~~~v~ 425 (770)
T 2r7e_B 416 LYPGVFETVE 425 (770)
T ss_dssp CCTTCCCEEE
T ss_pred ECCCeEEEEE
Confidence 9999999973
No 36
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=99.91 E-value=1.2e-25 Score=253.91 Aligned_cols=187 Identities=16% Similarity=0.060 Sum_probs=120.8
Q ss_pred eCCcCCC--ceEEEecCCee-------------eecccCC-CCCCCCCCccccCCCCCCCeeEEEEEeCCccceeEEeec
Q 047904 46 LNGKFPG--PRIVAREGDQL-------------HGIRRLR-SGWADGPAYITQCPIQTGQSCVYNFTIVGRRGKLWWHAH 109 (448)
Q Consensus 46 ~NG~~PG--P~I~v~~Gd~v-------------HGl~~~~-~~~~DGvp~vtq~pI~PG~~ftY~f~~~~~~GT~wYH~H 109 (448)
|||++|| |+|++++||+| ||++|.+ +.|+||++.+| |+|.||.+|+|+|++ .++||||||||
T Consensus 623 iNG~~~g~~P~l~~~~gd~v~~~v~~~g~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~-~~~Gt~~~h~h 700 (1065)
T 2j5w_A 623 MNGFMYGNQPGLTMCKGDSVVWYLFSAGNEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWP-DTEGTFNVECL 700 (1065)
T ss_dssp ETTBCTTCCCCCEEETTCCEEEEEECCCSTTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECC-CSCEEEEEEEC
T ss_pred EeeEecCCCCceEEeCCCEEEEEEEcCCCcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEec-CCCeEEEEecC
Confidence 9999999 88999999999 9999999 99999999999 999999999999997 79999999999
Q ss_pred CCCC-------------------C----ccc---cc----CCCccCCHHHHHHHHHh-cCCCCCCCccEEecCCCCCCCC
Q 047904 110 MTCL-------------------P----LWE---SA----GEWFNGGPKAIINQALQ-TGGGPNASDAFTINGLSGSLYN 158 (448)
Q Consensus 110 ~~~~-------------------P----~~e---~~----~d~~~~~~~~~~~~~~~-~g~~~~~~d~~liNG~~~~~~~ 158 (448)
...+ | +.| ++ +||++.+...+...+.. .+.. ++.+++|+.... ..
T Consensus 701 ~~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~~---p~~~~~n~~~~~-iG 776 (1065)
T 2j5w_A 701 TTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQN---VSNAFLDKGEFY-IG 776 (1065)
T ss_dssp SHHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTCC---CCCTTTCCTTTC-CC
T ss_pred CCcccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCCCccC---ccceeecCCCcc-cc
Confidence 8765 1 223 56 89999877654433321 2222 566667764321 11
Q ss_pred CCcccccccccchhcccccccccceeeccccc--ccccCcccceEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEE
Q 047904 159 RSAKEFQVEDMIFEEKNEGRALVDVILSNQEY--IGEMNAGRDMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVE 236 (448)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~ng~~--~~~~~~~~~~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva 236 (448)
..... ...+.+ . ...+.+.-.- ..+..+.+.++|++++|+++|+|++|.. ...+.++.+| +.+..
T Consensus 777 ~tY~k--~~y~~~---~-----d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~-~~~~sih~HG--l~~~~ 843 (1065)
T 2j5w_A 777 SKYKK--VVYRQY---T-----DSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMA-TRPYSIHAHG--VQTES 843 (1065)
T ss_dssp SEEEE--EEEEEE---S-----STTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECS-SSCBCCEESS--CBCSC
T ss_pred ceEee--eEEEEE---c-----CCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCC-CCCceEeecc--ccccC
Confidence 00000 000000 0 0011110000 0000112347899999999999999996 4556666665 44443
Q ss_pred ecCceeceeEeeeEEecCCcccccc
Q 047904 237 ADVVYVKPFETETLLIAPGQTTNGT 261 (448)
Q Consensus 237 ~DG~~v~P~~~~~i~i~~GeRydv~ 261 (448)
.++ ..|.|||++...
T Consensus 844 ~~~----------~~i~PG~~~ty~ 858 (1065)
T 2j5w_A 844 STV----------TPTLPGETLTYV 858 (1065)
T ss_dssp SCC----------CCBCTTCEEEEE
T ss_pred CCC----------ceeCCCCeEEEE
Confidence 322 245688876643
No 37
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=99.90 E-value=4e-25 Score=240.54 Aligned_cols=192 Identities=14% Similarity=0.057 Sum_probs=114.3
Q ss_pred CCcCCCceEEEecCCee----------------eecccCC----CCCCCCCCc--cccCCCCCCCeeEEEEEeCC-----
Q 047904 47 NGKFPGPRIVAREGDQL----------------HGIRRLR----SGWADGPAY--ITQCPIQTGQSCVYNFTIVG----- 99 (448)
Q Consensus 47 NG~~PGP~I~v~~Gd~v----------------HGl~~~~----~~~~DGvp~--vtq~pI~PG~~ftY~f~~~~----- 99 (448)
-+++|||+|||++||+| ||++++. .+|+||+++ +|||+|+||++|+|+|++++
T Consensus 69 ~~~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~~~~DG~p~~Dg~~~~~vtq~~I~PG~s~tY~f~v~~~~gP~ 148 (742)
T 2r7e_A 69 WMGLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKASEGAEYDDQTSQREKEDDKVFPGGSHTYVWQVLKENGPM 148 (742)
T ss_dssp TTTTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCCSSSSCCCSSCSCCSSSSSSSSCCTTCEECCEEEECGGGSCC
T ss_pred ccCCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccCccccCCccCCCCcccccccCcCCCCCeEEEEEEeccccCCC
Confidence 35899999999999999 9999864 344444442 89999999999999999853
Q ss_pred ----ccceeEEeecCCCCCc--ccccCCCccCCHHHHHHHHHhcCCCCCCCccEEecCC---CCCCCCCCcccccccccc
Q 047904 100 ----RRGKLWWHAHMTCLPL--WESAGEWFNGGPKAIINQALQTGGGPNASDAFTINGL---SGSLYNRSAKEFQVEDMI 170 (448)
Q Consensus 100 ----~~GT~wYH~H~~~~P~--~e~~~d~~~~~~~~~~~~~~~~g~~~~~~d~~liNG~---~~~~~~~~~~~~~~~~~~ 170 (448)
++||||||||.+.+.+ +.+.+-+...+.... . ..+... ..+..++... ....+... ....+.
T Consensus 149 ~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~-~---~~~~~~-~~e~~l~~~~~de~~~w~~~~----~~~~~~ 219 (742)
T 2r7e_A 149 ASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSL-A---KEKTQT-LHKFILLFAVFDEGKSWHSET----KNSLMQ 219 (742)
T ss_dssp SSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCT-T---TTTTTC-CCEECCCEECCCCSSSSCCCC----CC----
T ss_pred cCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCccc-C---cccCce-eeEEEEEeecccCCccccccc----cccccc
Confidence 4699999999986310 002222211111000 0 000000 1121211100 00000000 000000
Q ss_pred hhcccccccccceeecccccccccCcccceEEEEeCCcEEEEEEEeccCCC-eEEEEEcCCeeEEEEecCceeceeEeee
Q 047904 171 FEEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAALND-ELFFSIANHTLKVVEADVVYVKPFETET 249 (448)
Q Consensus 171 ~~~~~~g~~~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRliNa~~~~-~~~~~idgh~~~Vva~DG~~v~P~~~~~ 249 (448)
......-....+.+++||+... ..+.++|++|++|||||||+++.. .+.|||+||.|+|++. .+|+
T Consensus 220 ~~~~~~~~~~~~~~~ING~~~~-----~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh~f~Vvg~--------~~Dt 286 (742)
T 2r7e_A 220 DRDAASARAWPKMHTVNGYVNR-----SLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHTFLVRNH--------RQAS 286 (742)
T ss_dssp ---CCSCCCCCCCCEETTBCTB-----CCCCCEECSSSCEEEECCCCCSSSCCCCCCCTTCCCEETTE--------ECCS
T ss_pred cCCCccccccCceEEECCccCC-----CCcceEEcCCCEEEEEEEeCCCCCcceEEEECCCEEEEEeE--------ecce
Confidence 0000000112456788887542 236789999999999999999765 7999999999999852 3567
Q ss_pred EEecCCccccc
Q 047904 250 LLIAPGQTTNG 260 (448)
Q Consensus 250 i~i~~GeRydv 260 (448)
+.|.||||+++
T Consensus 287 v~v~Pg~~~~v 297 (742)
T 2r7e_A 287 LEISPITFLTA 297 (742)
T ss_dssp CCCCTTCCCEE
T ss_pred EEeCCCcEEEE
Confidence 77777777775
No 38
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=99.88 E-value=3.9e-24 Score=232.81 Aligned_cols=192 Identities=18% Similarity=0.146 Sum_probs=118.7
Q ss_pred CcCCCceEEEecCCee----------------eecccCCCCCCC-----CCCccccCCCCCCCeeEEEEEeCCccc----
Q 047904 48 GKFPGPRIVAREGDQL----------------HGIRRLRSGWAD-----GPAYITQCPIQTGQSCVYNFTIVGRRG---- 102 (448)
Q Consensus 48 G~~PGP~I~v~~Gd~v----------------HGl~~~~~~~~D-----Gvp~vtq~pI~PG~~ftY~f~~~~~~G---- 102 (448)
..+|||+||+++||+| ||+++. ++|+| |+++++||+|+||++|+|+|++++++|
T Consensus 447 ~g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~ 525 (742)
T 2r7e_A 447 SGILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKS 525 (742)
T ss_dssp SCSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSS
T ss_pred cCCCCCeEEEECCCEEEEEEEeCCCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCccc
Confidence 3579999999999999 999985 55676 567788999999999999999966554
Q ss_pred -----eeEEeecCCCCCc--ccccCCCccCCHHHHHHHHHhcCCC-CCCCccEEecCCC---CCCCCCCcccccccccch
Q 047904 103 -----KLWWHAHMTCLPL--WESAGEWFNGGPKAIINQALQTGGG-PNASDAFTINGLS---GSLYNRSAKEFQVEDMIF 171 (448)
Q Consensus 103 -----T~wYH~H~~~~P~--~e~~~d~~~~~~~~~~~~~~~~g~~-~~~~d~~liNG~~---~~~~~~~~~~~~~~~~~~ 171 (448)
|||||||.+.+.+ ..+.+-+...+...+ ...+.. ...-+..++...- ...+. +..+..+..
T Consensus 526 d~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~----~~~~~~~~~d~E~~l~~~~fde~~~wy~----~~~~~~~~~ 597 (742)
T 2r7e_A 526 DPRCLTRYYSSFVNMERDLASGLIGPLLICYKESV----DQRGNQIMSDKRNVILFSVFDENRSWYL----TENIQRFLP 597 (742)
T ss_dssp SCSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSC----CCCCCSSCCSCCCEEEECBCCGGGSSCS----HHHHHHHSS
T ss_pred CCCceEEEEecCcchhhhhhccceeeEEEcCcccc----ccccCcCCCCceEEEEeecccccccccc----ccchhhccc
Confidence 9999999987521 113332222211000 000000 0001222322100 00000 000000000
Q ss_pred h------cccccccccceeecccccccccCcccceEEEEeCCcEEEEEEEeccCC-CeEEEEEcCCeeEEEEecCceece
Q 047904 172 E------EKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAALN-DELFFSIANHTLKVVEADVVYVKP 244 (448)
Q Consensus 172 ~------~~~~g~~~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRliNa~~~-~~~~~~idgh~~~Vva~DG~~v~P 244 (448)
. ....-......+++||+..+ + . .+.+++|++|||||||+++. ..+.|||+||.|+|+ |
T Consensus 598 ~p~~v~~~~~~~~~~~~~~~ING~~~~--~---~-~l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~ 663 (742)
T 2r7e_A 598 NPAGVQLEDPEFQASNIMHSINGYVFD--S---L-QLSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------M 663 (742)
T ss_dssp SSSCSCCCCHHHHGGGCCBCTTTTCSS--C---C-CCCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------S
T ss_pred CchhcccccccccccCceeeecCcCCC--C---C-cEEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------c
Confidence 0 00000001234678887542 1 1 38999999999999998864 468999999999987 5
Q ss_pred eEeeeEEecCCccccccc
Q 047904 245 FETETLLIAPGQTTNGTF 262 (448)
Q Consensus 245 ~~~~~i~i~~GeRydv~~ 262 (448)
..+|+|.|.||||+++.+
T Consensus 664 ~~~Dtv~l~Pg~~~~v~~ 681 (742)
T 2r7e_A 664 VYEDTLTLFPFSGETVFM 681 (742)
T ss_dssp SSBCSSCCCCCSSEECCE
T ss_pred cceeEEEECCCcEEEEEE
Confidence 789999999999999854
No 39
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.43 E-value=1.5e-13 Score=136.70 Aligned_cols=82 Identities=20% Similarity=0.176 Sum_probs=61.2
Q ss_pred ccceeecccccccccCcccceEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEe---cCceeceeEeeeEEecCCc
Q 047904 180 LVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEA---DVVYVKPFETETLLIAPGQ 256 (448)
Q Consensus 180 ~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~---DG~~v~P~~~~~i~i~~Ge 256 (448)
..+++++||+..+ ++|+|++|+++|+||+|.+.. . ++|+.|-+.+.+. ||.+. +....|.|||
T Consensus 22 ~~~~~~~NG~~pG-------P~I~v~~Gd~v~v~v~N~l~~-~--~siH~HG~~~~~~~~~DGvp~----vtq~~I~PG~ 87 (339)
T 2zwn_A 22 DYKVFGFNGQVPG-------PLIHVQEGDDVIVNVTNNTSL-P--HTIHWHGVHQKGTWRSDGVPG----VTQQPIEAGD 87 (339)
T ss_dssp EEEEEEETTBSSC-------CEEEEETTCEEEEEEEEESSS-C--BCCEEETCCCTTCGGGSCCBT----TTBCCBCTTC
T ss_pred EEEEEEECCccCC-------CeEEEECCCEEEEEEEECCCC-C--ccEEeCCCCcCCCcccCCCCc----cccCccCCCC
Confidence 4567888988643 899999999999999999853 3 4566666667765 99863 3345799999
Q ss_pred ccccccCCcceEEEEEEeCC
Q 047904 257 TTNGTFDNSTVAGILEYERP 276 (448)
Q Consensus 257 Rydv~~~~~~~~aiL~Y~~~ 276 (448)
||+..+... ..+..-|...
T Consensus 88 ~~~y~f~~~-~~Gt~wyH~H 106 (339)
T 2zwn_A 88 SYTYKFKAD-RIGTLWYHCH 106 (339)
T ss_dssp EEEEEEECC-SCEEEEEECC
T ss_pred eEEEEEECC-CCEEEEEEec
Confidence 999877643 4567777754
No 40
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.30 E-value=9.5e-13 Score=131.05 Aligned_cols=158 Identities=16% Similarity=0.199 Sum_probs=98.2
Q ss_pred eEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCcccccccCCcc------------e
Q 047904 200 MILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGTFDNST------------V 267 (448)
Q Consensus 200 ~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeRydv~~~~~~------------~ 267 (448)
++|++++|+++|+||+|... ..+.||.+|..+. .+.||.++ +...|.|||+++..|.... .
T Consensus 77 P~I~v~~Gd~v~v~~~N~l~-~~~sih~HG~~~~-~~~DG~~~-----t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~ 149 (343)
T 3cg8_A 77 PLIEVNEGDTLHIEFTNTMD-VRASLHVHGLDYE-ISSDGTAM-----NKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGS 149 (343)
T ss_dssp CCEEEETTCEEEEEEEECSS-SCBCCEESSSBCC-GGGSCCTT-----TTCSBCTTCEEEEEEECCCCEECTTSCEECCS
T ss_pred CEEEEECCCEEEEEEEECCC-CCeeEEecCcccC-CcCCCccc-----ccccccCCCEEEEEEEeCCCCcccccccCCCC
Confidence 89999999999999999995 4566888888776 68999874 2345778888887553211 1
Q ss_pred EEEEEEeCCCCCCCCCCCCCCCCCcCCcCCCCCCccceeeeccccccccCCCCCCCCCCCcceEEEEEEeeCCCCCcccc
Q 047904 268 AGILEYERPPNFHHSSNSIKKLPLFKPILHALKDISFATCFTSKLRSLASTQFPANVPQNVDRRFFFTVGLGTSPCQTSV 347 (448)
Q Consensus 268 ~aiL~Y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~l~~~~~~~~~~~~i 347 (448)
.+..-|..... . .. ............... +++- ... ..|+.+.+.++ .|++
T Consensus 150 ~Gt~~YH~h~~--------~-~~---~~~~~~~~Gl~G~~i---V~~~------~~~--~pd~e~~l~~~------d~~i 200 (343)
T 3cg8_A 150 AGYWHYHDHVV--------G-TE---HGTGGIRNGLYGPVI---VRRK------GDV--LPDATHTIVFN------DMTI 200 (343)
T ss_dssp CEEEEEECSSS--------S-ST---TCHHHHHHTCEEEEE---EECT------TCC--CCSEEEEEEEE------TTEE
T ss_pred ceEEEEecCcc--------c-cc---cchhhhhcCCeEEEE---EecC------CCC--CCCceEEEEcc------ccee
Confidence 24555664421 0 00 000000000001000 0100 001 13566665553 2789
Q ss_pred cceeeecCChhhhhhhhcCCCCCccCCCCCCCCCccCCCCCCCCCCCccCCceeEEEeecCCEEEEEEeecCCCCCCCCC
Q 047904 348 NNISFVMPTTALFQAHFIGKPNGVYTPDFPTSPLIPFNYTGNPPNNTMVSNGTTLVVLTFNTNVELIMQDTSILGTESHP 427 (448)
Q Consensus 348 N~~sf~~p~~pll~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~Vdivi~N~~~~~~~~HP 427 (448)
||+.|. ....+.++.|++|+|+|.|.+ ...||
T Consensus 201 NG~~~~---------------------------------------------~~~~l~v~~Ge~vri~l~N~g---~~~Hp 232 (343)
T 3cg8_A 201 NNRKPH---------------------------------------------TGPDFEATVGDRVEIVMITHG---EYYHT 232 (343)
T ss_dssp TTCCTT---------------------------------------------CCCCEEEETTCEEEEEEEEES---SCCEE
T ss_pred cccCCC---------------------------------------------CCccEEeCCCCEEEEEEEcCC---ccccc
Confidence 987541 012468899999999999976 47899
Q ss_pred cccCCCceEEEEec
Q 047904 428 LHLHGFNFFVIGQG 441 (448)
Q Consensus 428 ~HLHGh~F~Vl~~G 441 (448)
||||||.|+|++.|
T Consensus 233 fHlHGh~f~v~~~G 246 (343)
T 3cg8_A 233 FHMHGHRWADNRTG 246 (343)
T ss_dssp EEETTCCEESSSSS
T ss_pred cEecCcEEEEeccC
Confidence 99999999997543
No 41
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.23 E-value=8.8e-12 Score=121.12 Aligned_cols=177 Identities=19% Similarity=0.158 Sum_probs=112.6
Q ss_pred ccceeecccccccccCcccceEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCcccc
Q 047904 180 LVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTN 259 (448)
Q Consensus 180 ~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeRyd 259 (448)
...++.+||+..+ ++|+++.|+++++|+.|... ..+.+|++|.. ..+.||.+-. ....|.|||+++
T Consensus 53 ~~~~~~~ng~~pg-------P~i~~~~Gd~v~v~~~N~~~-~~~~iH~HG~~--~~~~DG~p~~----~~~~i~PG~~~~ 118 (288)
T 3gdc_A 53 IFKGWSYNGRIPG-------PTLWAREGDALRIHFTNAGA-HPHTIHFHGVH--RATMDGTPGI----GAGSIAPGQSFT 118 (288)
T ss_dssp EEEEEEETTBSSC-------CEEEEETTCEEEEEEEECSS-SCBCCEESSCC--CGGGSCCTTS----TTCSBCTTCEEE
T ss_pred EEEEEEECCccCC-------CcEEEeCCCEEEEEEEeCCC-CcccEEecccc--ccccCCCCCc----cceeECCCCEEE
Confidence 4567889998743 89999999999999999984 56899999975 4578997642 345689999999
Q ss_pred cccCCcceEEEEEEeCCCCCCCCCCCCCCCCCcCCc-CCCCCCccceeeeccccccccCCCCCCCCCCCcceEEEEEEee
Q 047904 260 GTFDNSTVAGILEYERPPNFHHSSNSIKKLPLFKPI-LHALKDISFATCFTSKLRSLASTQFPANVPQNVDRRFFFTVGL 338 (448)
Q Consensus 260 v~~~~~~~~aiL~Y~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~l~~~~ 338 (448)
.+|.. ...+..-|..... +. ....... ..... +++- ...+..++++.+.++-
T Consensus 119 y~f~~-~~~Gt~~yH~H~~---------------~~~~~~~~Gl-~G~li---V~~~-------~~~~~~d~e~~l~~~d 171 (288)
T 3gdc_A 119 YEFDA-TPFGTHLYHCHQS---------------PLAPHIAKGL-YGGFI---VEPK-------EGRPPADDEMVMVMNG 171 (288)
T ss_dssp EEEEC-CSCEEEEEECCCS---------------SHHHHHHTTC-EEEEE---EECS-------SCCCCCSEEEEEEEEE
T ss_pred EEEEc-CCCccEEEEecCc---------------chHHHHhCcC-eEEEE---EeCC-------ccCCCCcceEEEEEee
Confidence 88765 3457777876532 00 0000010 01000 0100 0111245566555432
Q ss_pred -CC----CCCcccccceeeecCChhhhhhhhcCCCCCccCCCCCCCCCccCCCCCCCCCCCccCCceeEEEeecCCEEEE
Q 047904 339 -GT----SPCQTSVNNISFVMPTTALFQAHFIGKPNGVYTPDFPTSPLIPFNYTGNPPNNTMVSNGTTLVVLTFNTNVEL 413 (448)
Q Consensus 339 -~~----~~~~~~iN~~sf~~p~~pll~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~Vdi 413 (448)
.. ....|+|||+.|.. ....+.++.|++|+|
T Consensus 172 ~~~~~g~~~~~~~iNG~~~~~--------------------------------------------~~~~l~v~~Ge~vr~ 207 (288)
T 3gdc_A 172 YNTDGGDDNEFYSVNGLPFHF--------------------------------------------MDFPVKVKQHELVRI 207 (288)
T ss_dssp ECCSSTTCCSEEEETTSTTHH--------------------------------------------HHSCEEEETTCCEEE
T ss_pred EecCCCCCcceEEECcccccc--------------------------------------------cCcccccCCCCEEEE
Confidence 11 11246777765410 011357788999999
Q ss_pred EEeecCCCCCCCCCcccCCCceEEEEecC
Q 047904 414 IMQDTSILGTESHPLHLHGFNFFVIGQGF 442 (448)
Q Consensus 414 vi~N~~~~~~~~HP~HLHGh~F~Vl~~G~ 442 (448)
.|.|.+. ....||||||||.|+|++.|.
T Consensus 208 ~l~N~g~-~~~~H~fHlhG~~f~v~~~g~ 235 (288)
T 3gdc_A 208 HLINVLE-YDPINSFHIHGNFFHYYPTGT 235 (288)
T ss_dssp EEEECCC-SSSEEEEEETTCCEEEEETTC
T ss_pred EEEeCCC-CCcceeEEEcCCEEEEEcCCC
Confidence 9999752 124699999999999998654
No 42
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.23 E-value=6.3e-12 Score=123.84 Aligned_cols=83 Identities=17% Similarity=0.137 Sum_probs=62.4
Q ss_pred cceeecccccccccCcccceEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEE-EEecCceeceeEeeeEEecCCcccc
Q 047904 181 VDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAALNDELFFSIANHTLKV-VEADVVYVKPFETETLLIAPGQTTN 259 (448)
Q Consensus 181 ~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~V-va~DG~~v~P~~~~~i~i~~GeRyd 259 (448)
.+++.+||+..+ |+|+++.|+++++|+.|.. .....+|.+|....- .+.||.+- +....|.|||+++
T Consensus 22 ~~~~~~ng~~pG-------P~i~~~~Gd~v~v~~~N~l-~~~~siH~HG~~~~~~~~~DG~p~----~t~~~i~PG~~~~ 89 (318)
T 3g5w_A 22 FHTFAFNGQVPA-------PLIHVMEGDDVTVNVTNMT-TLPHTIHWHGMLQRGTWQSDGVPH----ATQHAIEPGDTFT 89 (318)
T ss_dssp EEEEEETTBSSC-------CEEEEETTCEEEEEEEECS-SSCBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEE
T ss_pred EEEEEECCccCC-------ceEEEeCCCEEEEEEEeCC-CCceeEEecCcCCCCCcccCCCcc----cccccCCCCCEEE
Confidence 456788887643 8999999999999999988 456888888876542 36899764 2335789999999
Q ss_pred cccCCcceEEEEEEeCC
Q 047904 260 GTFDNSTVAGILEYERP 276 (448)
Q Consensus 260 v~~~~~~~~aiL~Y~~~ 276 (448)
..|... ..+..-|...
T Consensus 90 y~f~~~-~~Gt~wYH~H 105 (318)
T 3g5w_A 90 YKFKAE-PAGTMWYHCH 105 (318)
T ss_dssp EEEECC-SCEEEEEECC
T ss_pred EEEEcC-CCEEEEEEcc
Confidence 877653 3566777655
No 43
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.17 E-value=1.5e-11 Score=118.76 Aligned_cols=168 Identities=16% Similarity=0.200 Sum_probs=106.7
Q ss_pred eeecccccccccCcccceEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCccccccc
Q 047904 183 VILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGTF 262 (448)
Q Consensus 183 ~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeRydv~~ 262 (448)
....||+..+ ++|+++.|+++++++.|.. .....+|.+|..+.. ..||.++ ..-.|.|||++..+|
T Consensus 26 ~~~~ng~~pG-------P~i~~~~Gd~v~v~~~N~~-~~~~siH~HG~~~~~-~~DG~~~-----t~~~i~pG~~~~Y~f 91 (276)
T 3kw8_A 26 FEKGKASVPG-------PLIEVNEGDTLHIEFTNTM-DVRASLHVHGLDYEI-SSDGTAM-----NKSDVEPGGTRTYTW 91 (276)
T ss_dssp SSTTCCBSSC-------CCEEEETTCEEEEEEEECS-SSCBCCEESSSBCCG-GGSCCTT-----TTCSBCTTCEEEEEE
T ss_pred eeccCCcccC-------CeEEEECCCEEEEEEEECC-CCCccEeecCcccCC-ccCCCcC-----CcCCCCCCCEEEEEE
Confidence 3456776543 8999999999999999997 567889999977654 5899772 334678999988766
Q ss_pred CCcc------------eEEEEEEeCCCCCCCCCCCCCCCCCcCCcCCCCCCccceeeeccccccccCCCCCCCCCCCcce
Q 047904 263 DNST------------VAGILEYERPPNFHHSSNSIKKLPLFKPILHALKDISFATCFTSKLRSLASTQFPANVPQNVDR 330 (448)
Q Consensus 263 ~~~~------------~~aiL~Y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~ 330 (448)
.... ..+..-|..... ... ............... +.+ +. .. ..|+
T Consensus 92 ~~~~~~~~~~g~~~~~~~gt~~YH~h~~--------~~~----~~~~~~~~Gl~G~li---V~~---~~---~~--~~dr 148 (276)
T 3kw8_A 92 RTHKPGRRDDGTWRPGSAGYWHYHDHVV--------GTE----HGTGGIRNGLYGPVI---VRR---KG---DV--LPDA 148 (276)
T ss_dssp ECCCCEECTTSCEECCSCEEEEEECSSS--------SST----TCHHHHHHTCEEEEE---EEC---TT---CC--CCSE
T ss_pred EcCCccccccCccCCCCCEEEEEecCcc--------ccc----cchhhhhCccEEEEE---Eec---CC---Cc--cccc
Confidence 4422 245666876532 000 000000000011100 000 00 01 1267
Q ss_pred EEEEEEeeCCCCCcccccceeeecCChhhhhhhhcCCCCCccCCCCCCCCCccCCCCCCCCCCCccCCceeEEEeecCCE
Q 047904 331 RFFFTVGLGTSPCQTSVNNISFVMPTTALFQAHFIGKPNGVYTPDFPTSPLIPFNYTGNPPNNTMVSNGTTLVVLTFNTN 410 (448)
Q Consensus 331 ~~~l~~~~~~~~~~~~iN~~sf~~p~~pll~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~ 410 (448)
.+.+.++ .|+|||+.|. + ...+.++.|++
T Consensus 149 E~~l~l~------~~~iNG~~~~-~--------------------------------------------~p~i~v~~G~~ 177 (276)
T 3kw8_A 149 THTIVFN------DMTINNRKPH-T--------------------------------------------GPDFEATVGDR 177 (276)
T ss_dssp EEEEEEE------TTEETTCCTT-C--------------------------------------------CCCEEEETTCE
T ss_pred ceEEEec------ccccceeccc-C--------------------------------------------CCCEEEecCCE
Confidence 7766654 2899997651 0 12467899999
Q ss_pred EEEEEeecCCCCCCCCCcccCCCceEEEEec
Q 047904 411 VELIMQDTSILGTESHPLHLHGFNFFVIGQG 441 (448)
Q Consensus 411 Vdivi~N~~~~~~~~HP~HLHGh~F~Vl~~G 441 (448)
|+|+|.|.+ ...||||||||.|+|++.|
T Consensus 178 vri~l~N~~---~~~Hp~HlHG~~f~v~~~G 205 (276)
T 3kw8_A 178 VEIVMITHG---EYYHTFHMHGHRWADNRTG 205 (276)
T ss_dssp EEEEEEEES---SCCEEEEETTCCEESSSSS
T ss_pred EEEEEecCC---CcceeEEEccceeEEeccC
Confidence 999999976 3689999999999998654
No 44
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.09 E-value=1.6e-10 Score=112.79 Aligned_cols=161 Identities=19% Similarity=0.251 Sum_probs=100.2
Q ss_pred ceEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCcccccccCC------------cc
Q 047904 199 DMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGTFDN------------ST 266 (448)
Q Consensus 199 ~~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeRydv~~~~------------~~ 266 (448)
-|+|+++.|+++++++.|... ...++|.+|..+. -+.||.++. .-.|.|||++.-+|.. ..
T Consensus 57 GP~i~~~~GD~v~v~~~N~l~-~~~siH~HG~~~~-~~~DG~~~~-----~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~ 129 (299)
T 3t9w_A 57 GPVLEMWEGDTLEIDLVNTTD-RVLSLHPHGVDYD-VNSDGTLMN-----GSAVMPGQTRRYTWRSHVGYRRADGSWAEG 129 (299)
T ss_dssp CCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCC-GGGSCCTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEECC
T ss_pred CceEEEECCeEEEEEEEECCC-CCccEEeCCcccC-CccCCCccc-----cCccCCCCeEEEEEEeecccccCCCcCCCC
Confidence 389999999999999999974 5678888887654 357997652 1237899988765432 12
Q ss_pred eEEEEEEeCCCCCCCCCCCCCCCCCcCCcCCCCCCccceeeeccccccccCCCCCCCCCCCcceEEEEEEeeCCCCCccc
Q 047904 267 VAGILEYERPPNFHHSSNSIKKLPLFKPILHALKDISFATCFTSKLRSLASTQFPANVPQNVDRRFFFTVGLGTSPCQTS 346 (448)
Q Consensus 267 ~~aiL~Y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~l~~~~~~~~~~~~ 346 (448)
..+..-|..... .... ......... ..... +. . +-+...|+.+.+.++ .|.
T Consensus 130 ~~gt~~YH~H~~--------~~~~---~~~~~~~GL-~G~li---V~---~-----~~~~~~d~e~~l~~~------~~~ 180 (299)
T 3t9w_A 130 TAGYWHYHDHAM--------GTEH---GTEGVLKGL-YGALV---VR---R-----QGDLLPKRQFTVVFN------DMM 180 (299)
T ss_dssp CCEEEEEECSSS--------SSTT---CHHHHHHTC-EEEEE---EE---C-----TTCCCCSEEEEEEEE------TTE
T ss_pred CceeEEEecCCc--------cccc---chhhhcccc-cceEE---Ee---c-----ccccCccccceeeee------eee
Confidence 446677775431 0000 000000000 01000 00 0 011124667666664 277
Q ss_pred ccceeeecCChhhhhhhhcCCCCCccCCCCCCCCCccCCCCCCCCCCCccCCceeEEEeecCCEEEEEEeecCCCCCCCC
Q 047904 347 VNNISFVMPTTALFQAHFIGKPNGVYTPDFPTSPLIPFNYTGNPPNNTMVSNGTTLVVLTFNTNVELIMQDTSILGTESH 426 (448)
Q Consensus 347 iN~~sf~~p~~pll~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~Vdivi~N~~~~~~~~H 426 (448)
+|++.|. ....+.++.|++|+|+|.|.+ ...|
T Consensus 181 ~Ng~~~~---------------------------------------------~~p~l~v~~Ge~Vr~~liN~~---~~~H 212 (299)
T 3t9w_A 181 INNRAHH---------------------------------------------DAPTFEANLGERVEWIAIGHG---SNFH 212 (299)
T ss_dssp ETTCCTT---------------------------------------------CCCEEEEETTCEEEEEEEEES---SCCC
T ss_pred ecCcccc---------------------------------------------ccccceecCCCEEEEEEEecc---ccce
Confidence 8876441 122467889999999999976 4689
Q ss_pred CcccCCCceEEEEecCC
Q 047904 427 PLHLHGFNFFVIGQGFG 443 (448)
Q Consensus 427 P~HLHGh~F~Vl~~G~G 443 (448)
|||||||.|+|+..|..
T Consensus 213 pfHlHGh~F~v~~~g~~ 229 (299)
T 3t9w_A 213 TFHLHGHRWLDNRTGMR 229 (299)
T ss_dssp EEEETTCCEESSSSSSC
T ss_pred eeeEecceEEEEecccc
Confidence 99999999999887654
No 45
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=98.94 E-value=8.2e-10 Score=108.47 Aligned_cols=161 Identities=16% Similarity=0.180 Sum_probs=99.5
Q ss_pred cceEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCcccccccCC------------c
Q 047904 198 RDMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGTFDN------------S 265 (448)
Q Consensus 198 ~~~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeRydv~~~~------------~ 265 (448)
|-|+|+++.|++++++|.|... ....+|.+|-.+.. +.||.++. .-.|.|||++.-+|+. .
T Consensus 40 PGP~i~~~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~-~~dG~~~~-----~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~ 112 (313)
T 3tas_A 40 PGPLIELNEGDTLHIEFENTMD-VPVSLHVHGLDYEI-SSDGTKQS-----RSDVEPGGTRTYTWRTHVPGRRADGTWRA 112 (313)
T ss_dssp SCCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCCG-GGSCSTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEEC
T ss_pred cCCeEEEECCCEEEEEEEECCC-CCccEeecCCcCCc-cCCCCccc-----cCCcCCCCEEEEEEEeccCCccccccccC
Confidence 3489999999999999999884 56788888875542 56897642 1237899988765432 1
Q ss_pred ceEEEEEEeCCCCCCCCCCCCCCCCCcCCcCCCCCCccceeeeccccccccCCCCCCCCCCCcceEEEEEEeeCCCCCcc
Q 047904 266 TVAGILEYERPPNFHHSSNSIKKLPLFKPILHALKDISFATCFTSKLRSLASTQFPANVPQNVDRRFFFTVGLGTSPCQT 345 (448)
Q Consensus 266 ~~~aiL~Y~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~p~~~p~~~d~~~~l~~~~~~~~~~~ 345 (448)
...+..-|..... .... . ...+..-...... +++ +-....|+.+.+.++ .|
T Consensus 113 ~~~gt~~YH~h~~--------~~~~-~---~~~~~~Gl~G~li---V~~--------~~~~~~d~e~~l~~~------d~ 163 (313)
T 3tas_A 113 GSAGYWHYHDHVV--------GTEH-G---TGGIRNGLYGPVI---VRR--------KGDVLPDRTHTIVFN------DM 163 (313)
T ss_dssp CSCEEEEEECSSS--------SSTT-C---HHHHHHTCEEEEE---EEC--------TTCBCCSEEEEEEEE------TT
T ss_pred CCceEEEEeecCc--------cccc-c---hhhhhccccCceE---eec--------cccccccccceeecc------ch
Confidence 2446777775531 0000 0 0000000011100 000 001124677766664 27
Q ss_pred cccceeeecCChhhhhhhhcCCCCCccCCCCCCCCCccCCCCCCCCCCCccCCceeEEEeecCCEEEEEEeecCCCCCCC
Q 047904 346 SVNNISFVMPTTALFQAHFIGKPNGVYTPDFPTSPLIPFNYTGNPPNNTMVSNGTTLVVLTFNTNVELIMQDTSILGTES 425 (448)
Q Consensus 346 ~iN~~sf~~p~~pll~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~v~~g~~Vdivi~N~~~~~~~~ 425 (448)
++|+..+. ....+.++.|++|+|+|.|.+ ...
T Consensus 164 t~Ng~~~~---------------------------------------------~~~~l~v~~Ge~vr~~liN~g---~~~ 195 (313)
T 3tas_A 164 TINNRPAH---------------------------------------------TGPDFEATVGDRVEFVMITHG---EYY 195 (313)
T ss_dssp EETTCCTT---------------------------------------------CCCCEEEETTCEEEEEEEEES---SCC
T ss_pred hcccCCcc---------------------------------------------cccccccccCCEEEEEEeccc---ccc
Confidence 88876441 011367788999999999976 468
Q ss_pred CCcccCCCceEEEEecC
Q 047904 426 HPLHLHGFNFFVIGQGF 442 (448)
Q Consensus 426 HP~HLHGh~F~Vl~~G~ 442 (448)
||||||||.|+|+++|.
T Consensus 196 hpfHlHGh~F~v~~~~~ 212 (313)
T 3tas_A 196 HTFHLHGHRWADNRTGM 212 (313)
T ss_dssp EEEEETTCCEESSTTSS
T ss_pred eeeeecCCeeEEEEECC
Confidence 99999999999998764
No 46
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=98.91 E-value=2.4e-10 Score=93.46 Aligned_cols=63 Identities=19% Similarity=0.143 Sum_probs=48.5
Q ss_pred CcCCCceEEEecCCee---------eecccCCCCC-------CCCCCccccCCCCCCCeeEEEEEeCCccceeEEeecCC
Q 047904 48 GKFPGPRIVAREGDQL---------HGIRRLRSGW-------ADGPAYITQCPIQTGQSCVYNFTIVGRRGKLWWHAHMT 111 (448)
Q Consensus 48 G~~PGP~I~v~~Gd~v---------HGl~~~~~~~-------~DGvp~vtq~pI~PG~~ftY~f~~~~~~GT~wYH~H~~ 111 (448)
-+|++|+|+|++||+| |.++..+... +||.+ .+++.|.||++++|+|++++++|+||||||.|
T Consensus 14 ~~f~p~~i~v~~Gd~V~~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~-~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~~H 92 (105)
T 3cvb_A 14 FQFEPANVTVHPGDTVKWVNNKLPPHNILFDDKQVPGASKELADKLS-HSQLMFSPGESYEITFSSDFPAGTYTYYCAPH 92 (105)
T ss_dssp SCEESSEEEECTTEEEEEEECSSCCEEEEECTTSSGGGCHHHHHHHC-EEEEECSTTCEEEEEECTTSCSEEEEEECTTT
T ss_pred cEEeCCEEEEcCCCEEEEEECCCCCCeEEEeCCCCCccccccccccc-ccccccCCCCeEEEEEecCCCCeeEEEEeCCc
Confidence 4788999999999999 7666554221 12222 35688999999999998656899999999954
No 47
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=98.87 E-value=2.3e-09 Score=105.94 Aligned_cols=79 Identities=16% Similarity=0.168 Sum_probs=59.6
Q ss_pred ccceeecccccccccCcccceEEEEeCCcEEEEEEEeccCC-CeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCccc
Q 047904 180 LVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAALN-DELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTT 258 (448)
Q Consensus 180 ~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRliNa~~~-~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeRy 258 (448)
...++.+||+..+ ++|+|+.|+++|+|++|.... ..+.+|++|.. +.||.+. ...|.||||+
T Consensus 57 ~~~~~~~ng~~pg-------P~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~PG~~~ 119 (327)
T 1kbv_A 57 EYRYWTFDGDVPG-------RMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTAPGRTS 119 (327)
T ss_dssp EEEEEEETTBSSC-------CBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBCTTEEE
T ss_pred EEEEEEECCccCC-------CeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeecCCCEE
Confidence 4567888887643 899999999999999999853 57888888863 5788652 2248999999
Q ss_pred ccccCCcceEEEEEEeCC
Q 047904 259 NGTFDNSTVAGILEYERP 276 (448)
Q Consensus 259 dv~~~~~~~~aiL~Y~~~ 276 (448)
+..|...+ .|..-|...
T Consensus 120 ~y~f~~~~-~Gt~wyH~h 136 (327)
T 1kbv_A 120 TFSFKALQ-PGLYIYHCA 136 (327)
T ss_dssp EEEEECCS-CEEEEEECC
T ss_pred EEEEECCC-CeEEEEEeC
Confidence 98876433 466777754
No 48
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.78 E-value=3.8e-09 Score=87.60 Aligned_cols=58 Identities=21% Similarity=0.292 Sum_probs=49.1
Q ss_pred eCCcCCCceEEEecCCee-----------eecccCCCCCCCCCCccccCCCCCCCeeEEEEEeCCccceeEEeecCCC
Q 047904 46 LNGKFPGPRIVAREGDQL-----------HGIRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVGRRGKLWWHAHMTC 112 (448)
Q Consensus 46 ~NG~~PGP~I~v~~Gd~v-----------HGl~~~~~~~~DGvp~vtq~pI~PG~~ftY~f~~~~~~GT~wYH~H~~~ 112 (448)
+|++|+.|.|+|++||+| ||+..+.. | + +..|.||++++|.|++ +++|+||||||.+.
T Consensus 31 ~~~~f~p~~i~v~~G~~V~~~~~n~d~~~H~~~i~~~----~---~-~~~i~pG~~~~~~f~~-~~~G~y~~~C~~~~ 99 (112)
T 1iby_A 31 FNVLNEPETLVVKKGDAVKVVVENKSPISEGFSIDAF----G---V-QEVIKAGETKTISFTA-DKAGAFTIWCQLHP 99 (112)
T ss_dssp EEEEEESCEEEEETTCEEEEEEEECSSSCEEEEEGGG----T---E-EEEECTTCEEEEEEEC-CSCEEEEEBCSSSC
T ss_pred EeeEEcCCEEEEeCCCEEEEEEEECCCCeEEEEEcCC----C---c-eeEeCCCCEEEEEEEC-CCCEEEEEECCCCC
Confidence 667788999999999999 99886642 2 2 4679999999999996 89999999998764
No 49
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=98.76 E-value=1.1e-09 Score=107.21 Aligned_cols=75 Identities=17% Similarity=0.069 Sum_probs=54.9
Q ss_pred eEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEecCceec----eeEeeeEEecCCcccccccCCc---------c
Q 047904 200 MILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVK----PFETETLLIAPGQTTNGTFDNS---------T 266 (448)
Q Consensus 200 ~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~DG~~v~----P~~~~~i~i~~GeRydv~~~~~---------~ 266 (448)
|+|+++.|+++|+||+|.. ...+.+|.+|..+. .+.||.+.. ++......|.||||++..+... .
T Consensus 60 P~I~v~~Gd~v~v~~~N~l-~~~~siH~HGl~~~-~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~~~gp~~~d~ 137 (306)
T 1sdd_A 60 PTLYAEVGDIMKVHFKNKA-HKPLSIHAQGIKYS-KFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTHDDP 137 (306)
T ss_dssp CCEEEETTCEEEEEEEECS-SSCBCCEEESSCCC-TTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSCCSSSC
T ss_pred CEEEEeCCCEEEEEEEECC-CCcccEeecceecc-cccCCCccCCCCcccccCCCccCCCCeEEEEEEeCCccCCCCCCC
Confidence 8999999999999999987 46677788877642 268998763 2233357799999999866432 2
Q ss_pred eEEEEEEeCC
Q 047904 267 VAGILEYERP 276 (448)
Q Consensus 267 ~~aiL~Y~~~ 276 (448)
..+..-|...
T Consensus 138 ~~GT~wYHsH 147 (306)
T 1sdd_A 138 PCLTHIYYSY 147 (306)
T ss_dssp SEEEEEEECC
T ss_pred CceEEEEecc
Confidence 3467777765
No 50
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=98.75 E-value=1.4e-08 Score=104.69 Aligned_cols=191 Identities=8% Similarity=-0.028 Sum_probs=105.4
Q ss_pred eCCcCCCceEEEecCCee------------eeccc-CCCC----CCCCCC-----ccccCCCCCCCeeEEEEEeCCccce
Q 047904 46 LNGKFPGPRIVAREGDQL------------HGIRR-LRSG----WADGPA-----YITQCPIQTGQSCVYNFTIVGRRGK 103 (448)
Q Consensus 46 ~NG~~PGP~I~v~~Gd~v------------HGl~~-~~~~----~~DGvp-----~vtq~pI~PG~~ftY~f~~~~~~GT 103 (448)
|||+. .|+|+|++| ++ +-++. .+-. ..||.+ .+.+..|.||++++..+++ .+.|+
T Consensus 187 iNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~-~~~~~ 263 (451)
T 2uxt_A 187 VNGVQ-SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAPGERREILVDM-SNGDE 263 (451)
T ss_dssp ETTEE-SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEEEEEEESSEEECTTCEEEEEEEC-TTCCC
T ss_pred ECCcc-cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccCCceEeceEEECceeEEEEEEEe-CCCCE
Confidence 89986 699999999 98 33333 1211 269864 2456779999999999998 57899
Q ss_pred eEEeecCCCCCcccccCCCccCCHHHHHHHHHhcCCCCCCCccEEecCCCCCCCCCCcccccccccchhccccc---c-c
Q 047904 104 LWWHAHMTCLPLWESAGEWFNGGPKAIINQALQTGGGPNASDAFTINGLSGSLYNRSAKEFQVEDMIFEEKNEG---R-A 179 (448)
Q Consensus 104 ~wYH~H~~~~P~~e~~~d~~~~~~~~~~~~~~~~g~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~~~~~~g---~-~ 179 (448)
||++++....- ..++... .. ..+... ....+.+.+.+...-........+..+........ . .
T Consensus 264 ~~l~~~~~~~~-~~~~~~~---------~~--~~~~~~-~~~il~~~~~~~~~~~~~~~p~~L~~~~~~~~~~~~~~~~~ 330 (451)
T 2uxt_A 264 VSITCGEAASI-VDRIRGF---------FE--PSSILV-STLVLTLRPTGLLPLVTDSLPMRLLPTEIMAGSPIRSRDIS 330 (451)
T ss_dssp EEEEC----------------------------CCCCS-CCEEEEEEECSCCC----CCCSCSSSSCCCCCCCSEEEEEE
T ss_pred EEEEecCcccc-ccccccc---------cc--cCCCCC-CcceEEEEecCCCcCccccCccccCCCCCCCCCCcceEEEE
Confidence 99998753210 0000000 00 000000 00000011000000000000000000000000000 0 0
Q ss_pred ccceeecccccccccCcccceEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEecCcee---ceeEeeeEEecCCc
Q 047904 180 LVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYV---KPFETETLLIAPGQ 256 (448)
Q Consensus 180 ~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~DG~~v---~P~~~~~i~i~~Ge 256 (448)
+...+++||+.... +...+.++.|++++|+|+|. ..+.|||+||.|+|++.||.++ +|...|++.| ||
T Consensus 331 l~~~~~iNg~~f~~----~~~~~~~~~G~~~~~~l~N~---~~HP~HLHGh~F~Vl~~~G~~~~~~~p~~rDTv~v--g~ 401 (451)
T 2uxt_A 331 LGDDPGINGQLWDV----NRIDVTAQQGTWERWTVRAD---EPQAFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWV--DG 401 (451)
T ss_dssp ECSSSSBTTBCCCT----TCCCEEEETTCEEEEEEEEE---EEEEEEETTCEEEEEEETTBCCCGGGSSCBSEEEE--EE
T ss_pred EeeEEEECCEeCCC----CCCcEEcCCCCEEEEEEECC---CCcCeEECCceEEEEeeCCcCCCcccCCCccEEEE--CC
Confidence 00047788886531 12468999999999999998 4799999999999999999876 4788999999 88
Q ss_pred ccccc
Q 047904 257 TTNGT 261 (448)
Q Consensus 257 Rydv~ 261 (448)
++.+.
T Consensus 402 ~~~i~ 406 (451)
T 2uxt_A 402 QVELL 406 (451)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88763
No 51
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=98.68 E-value=2.1e-08 Score=107.98 Aligned_cols=78 Identities=13% Similarity=0.130 Sum_probs=46.3
Q ss_pred cceEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEecCceec---e-eEeeeEEecCCcccccccCCcc-------
Q 047904 198 RDMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVK---P-FETETLLIAPGQTTNGTFDNST------- 266 (448)
Q Consensus 198 ~~~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~DG~~v~---P-~~~~~i~i~~GeRydv~~~~~~------- 266 (448)
+.|+|+++.|+++++||.|... ....||.||-... .+.||.+.. | ..+....|.|||+++..|....
T Consensus 67 pGP~I~~~~Gd~v~v~~~N~l~-~~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~ 144 (647)
T 1sdd_B 67 LGPVIRAEVDDVIQVRFKNLAS-RPYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENP 144 (647)
T ss_dssp SCCCEEEETTCEEEEEECCCSS-SCBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCSS
T ss_pred cCceEEEeCCCEEEEEEEECCC-CceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCC
Confidence 3489999999999999999985 5677777776654 578998753 2 2234567999999997664322
Q ss_pred --eEEEEEEeCCC
Q 047904 267 --VAGILEYERPP 277 (448)
Q Consensus 267 --~~aiL~Y~~~~ 277 (448)
.....-|....
T Consensus 145 G~~c~T~wYHsH~ 157 (647)
T 1sdd_B 145 GSACRAWAYYSAV 157 (647)
T ss_dssp SCSEEEEEEECCS
T ss_pred CCCceEEEEccCC
Confidence 22367777553
No 52
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=98.68 E-value=9.3e-08 Score=98.14 Aligned_cols=206 Identities=13% Similarity=0.153 Sum_probs=119.2
Q ss_pred eCCcCCCceEEEecCCee-------------------eecccCCCCCCCCCCc-----cccCCCCCCCeeEEEEEeCCcc
Q 047904 46 LNGKFPGPRIVAREGDQL-------------------HGIRRLRSGWADGPAY-----ITQCPIQTGQSCVYNFTIVGRR 101 (448)
Q Consensus 46 ~NG~~PGP~I~v~~Gd~v-------------------HGl~~~~~~~~DGvp~-----vtq~pI~PG~~ftY~f~~~~~~ 101 (448)
|||+. .|.|+|++| ++ |-+.+.. .||.+- +....|.||++++..+++ .++
T Consensus 182 iNG~~-~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~---~DG~~~~~p~~~~~l~l~pgeR~dv~v~~-~~~ 255 (439)
T 2xu9_A 182 VNGAL-RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIA---ADGGFLEEPLEVSELLLAPGERAEVLVRL-RKE 255 (439)
T ss_dssp ETTEE-SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEE---ETTEEEEEEEEESCEEECTTCEEEEEEEC-CSS
T ss_pred ECCcc-CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEe---cCCCCCCCceEeceEEECCceeEEEEEEc-CCC
Confidence 89987 799999999 88 3344433 688752 234458999999999998 669
Q ss_pred ceeEEeecCCCCCccc---c--cCCCccC---CHHHHHHHHHhcCC--CCCCCccEEecCCCCCCCCCCcccccccccch
Q 047904 102 GKLWWHAHMTCLPLWE---S--AGEWFNG---GPKAIINQALQTGG--GPNASDAFTINGLSGSLYNRSAKEFQVEDMIF 171 (448)
Q Consensus 102 GT~wYH~H~~~~P~~e---~--~~d~~~~---~~~~~~~~~~~~g~--~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~~ 171 (448)
|.||++++........ + ++.-+.. ....+ ......+. ....+... ....+-.. ......+..
T Consensus 256 G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~p~~l------~~~~~l~~-~~~~r~~~l 327 (439)
T 2xu9_A 256 GRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETL-LYLIAPKNPKPLPLPKAL------SPFPTLPA-PVVTRRLVL 327 (439)
T ss_dssp EEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEE-EEEEECSSCCCCCCCSCC------CCCCCCCC-CSEEEEEEE
T ss_pred ceEEEEecccccCCccccccccccccccCCCCCccee-EEEEecCCCccccCcccC------CCcccCCC-CCcceEEEE
Confidence 9999999843210000 0 0000000 00000 00000000 00001000 00000000 000011111
Q ss_pred hcccccccccceeecccccccccCcccceEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEecCcee-ceeEeeeE
Q 047904 172 EEKNEGRALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYV-KPFETETL 250 (448)
Q Consensus 172 ~~~~~g~~~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~DG~~v-~P~~~~~i 250 (448)
.... .+..+.+||+.... +...+.++.|++++|+|+|.+ ...+.||||||.|+|++.+|... .|...|++
T Consensus 328 ~~~~----~g~~~~iNg~~~~~----~~~~~~~~~g~~~~~~~~N~~-~~~HP~HLHG~~F~Vl~~~g~~~~~p~~rDTv 398 (439)
T 2xu9_A 328 TEDM----MAARFFINGQVFDH----RRVDLKGQAQTVEVWEVENQG-DMDHPFHLHVHPFQVLSVGGRPFPYRAWKDVV 398 (439)
T ss_dssp EEEG----GGTEEEETTBCCCT----TCCCEEECTTCEEEEEEEECS-SSCEEEEESSCCBEEEEETTEECSSCCCBSEE
T ss_pred Eeec----cCceEeECCEECCC----CCCceecCCCCEEEEEEEcCC-CCCCCceeCCCcEEEEeeCCCCCCCCCCeEEE
Confidence 1111 12357789886531 123589999999999999987 46799999999999999999887 48889999
Q ss_pred EecCCcccccccCC-cceEEEEEEe
Q 047904 251 LIAPGQTTNGTFDN-STVAGILEYE 274 (448)
Q Consensus 251 ~i~~GeRydv~~~~-~~~~aiL~Y~ 274 (448)
.|.+|+++.++|.. ..+.-++++.
T Consensus 399 ~v~p~~~v~i~f~adnpG~w~~HCH 423 (439)
T 2xu9_A 399 NLKAGEVARLLVPLREKGRTVFHCH 423 (439)
T ss_dssp EECTTCEEEEEEECCSCEEEEEEES
T ss_pred EeCCCCEEEEEEEcCCCCCEEEECC
Confidence 99999999886642 2233344443
No 53
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=98.60 E-value=5.2e-08 Score=79.76 Aligned_cols=68 Identities=19% Similarity=0.287 Sum_probs=53.5
Q ss_pred EEEEEEEEEEeeCCcCCCceEEEecCCee---------eecccCCCCCCCCCCccccCCCCCCCeeEEEEEeCCccceeE
Q 047904 35 RHYEFDIKLQNLNGKFPGPRIVAREGDQL---------HGIRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVGRRGKLW 105 (448)
Q Consensus 35 ~~~~l~i~~~~~NG~~PGP~I~v~~Gd~v---------HGl~~~~~~~~DGvp~vtq~pI~PG~~ftY~f~~~~~~GT~w 105 (448)
..+++++ -+..|-.+.|+|++||+| |.++.... +||.....+..|.||++++|.| .++|+||
T Consensus 19 ~~~~V~~----~~~~F~P~~i~v~~Gd~V~~~N~d~~~H~v~~~~~--~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~ 89 (105)
T 2ov0_A 19 GAIVVDI----AKMKYETPELHVKVGDTVTWINREAMPHNVHFVAG--VLGEAALKGPMMKKEQAYSLTF---TEAGTYD 89 (105)
T ss_dssp TCEEEEE----ETTEESSSEEEECTTCEEEEEECSSSCBCCEECTT--TSSSSCEECCCBCTTEEEEEEE---CSCEEEE
T ss_pred cCEEEEE----eecEEcCCEEEECCCCEEEEEECCCCCEEEEEcCC--CCCcccccccccCCCCEEEEEe---CCCEEEE
Confidence 3455555 255677889999999999 88886542 5787767777899999999988 4799999
Q ss_pred EeecCC
Q 047904 106 WHAHMT 111 (448)
Q Consensus 106 YH~H~~ 111 (448)
|||+.|
T Consensus 90 y~C~~H 95 (105)
T 2ov0_A 90 YHCTPH 95 (105)
T ss_dssp EECSSC
T ss_pred EEeCCC
Confidence 999876
No 54
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=98.50 E-value=1e-07 Score=83.52 Aligned_cols=65 Identities=12% Similarity=0.194 Sum_probs=44.5
Q ss_pred eCCcCCCceEEEecCCee------------eecccC--CCCCCCC------CCccc-cCCCCCCC--eeEEEEEeCCccc
Q 047904 46 LNGKFPGPRIVAREGDQL------------HGIRRL--RSGWADG------PAYIT-QCPIQTGQ--SCVYNFTIVGRRG 102 (448)
Q Consensus 46 ~NG~~PGP~I~v~~Gd~v------------HGl~~~--~~~~~DG------vp~vt-q~pI~PG~--~ftY~f~~~~~~G 102 (448)
++|. ++|+|+|++||+| |++... ++++.+. +++.. ..+|.||+ +++|.|++ ++|
T Consensus 55 ~~g~-~~p~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t~tft~--~pG 131 (154)
T 2cal_A 55 VHDK-KNPTLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTDFTWHP--TAG 131 (154)
T ss_dssp ETTE-ESCEEEECTTCEEEEEEEECCTTCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEEEEECC--CSE
T ss_pred ccCC-CCCEEEEeCCCEEEEEEEcCCCCeeeEEEEeecCcchhccccccccccccccccccCCCCceEEEEEEEE--CCc
Confidence 4444 5799999999999 665443 3333221 11100 02689999 99999995 899
Q ss_pred eeEEeecCCCC
Q 047904 103 KLWWHAHMTCL 113 (448)
Q Consensus 103 T~wYH~H~~~~ 113 (448)
|||||||..++
T Consensus 132 tY~y~C~~~gH 142 (154)
T 2cal_A 132 TYYYVCQIPGM 142 (154)
T ss_dssp EEEEECCSTTT
T ss_pred eEEEECCCCCH
Confidence 99999997544
No 55
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=98.50 E-value=2.2e-08 Score=109.30 Aligned_cols=74 Identities=8% Similarity=0.019 Sum_probs=55.2
Q ss_pred cceEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCcccccccCCcc---------eE
Q 047904 198 RDMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGTFDNST---------VA 268 (448)
Q Consensus 198 ~~~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeRydv~~~~~~---------~~ 268 (448)
+-|+|+++.|++++++|.|... ....||.||..+....-||.+- + .-.|.|||++..+|.... ..
T Consensus 197 pGP~Ir~~~GD~v~v~~~N~l~-~~~siH~HG~~~~~~~~dG~~~-~----~~~I~PG~~~tY~f~~~~~~gp~~~d~~~ 270 (770)
T 2r7e_B 197 LGPYIRAEVEDNIMVTFRNQAS-RPYSFYSSLISYEEDQRQGAEP-R----KNFVKPNETKTYFWKVQHHMAPTKDEFDC 270 (770)
T ss_dssp CCCCCCCCSSSCEEEEEECCSS-SCCCCCBTTCCCCCCSSSCTTT-T----SSCCCSSCEEEEECCCCSSSSCCSSCCSE
T ss_pred CCCeEEEEcCCEEEEEEEECCC-CCcceeecccccccccCCCCcC-c----cCccCCCCeEEEEEEecCccCCccCCCCC
Confidence 4589999999999999999974 6778888887655444368652 1 245889999998765442 67
Q ss_pred EEEEEeCCC
Q 047904 269 GILEYERPP 277 (448)
Q Consensus 269 aiL~Y~~~~ 277 (448)
+..-|..+.
T Consensus 271 Gt~wYHsh~ 279 (770)
T 2r7e_B 271 KAWAYSSDV 279 (770)
T ss_dssp EEEEECCCS
T ss_pred eeEEeeccC
Confidence 788887653
No 56
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=98.50 E-value=4.3e-07 Score=95.16 Aligned_cols=72 Identities=15% Similarity=0.228 Sum_probs=58.5
Q ss_pred eEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEecCce----eceeEeeeEEe-cCCcccccccCC-cceEEEEEE
Q 047904 200 MILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVY----VKPFETETLLI-APGQTTNGTFDN-STVAGILEY 273 (448)
Q Consensus 200 ~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~DG~~----v~P~~~~~i~i-~~GeRydv~~~~-~~~~aiL~Y 273 (448)
..+.++.|++++++++| ...+.||+|||.|+|++.+|.. ..|...|++.| .+|+++.++|.. ..+.-++++
T Consensus 397 ~~~~v~~g~~vei~l~N---~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~aDNPG~W~~HC 473 (521)
T 1v10_A 397 AVISLPANQVIEISIPG---GGNHPFHLHGHNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHC 473 (521)
T ss_dssp TEEEECTTCEEEEEEEC---CBSCEEEESSCCEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECCSCEEEEEEE
T ss_pred eEEEecCCCEEEEEEcC---CCCCCEEEccceEEEEecCCCCccccCCCCeeeeEEeCCCCcEEEEEEEeCCCeeEEEee
Confidence 57899999999999999 4579999999999999999875 35889999999 799999887642 234444444
Q ss_pred e
Q 047904 274 E 274 (448)
Q Consensus 274 ~ 274 (448)
.
T Consensus 474 H 474 (521)
T 1v10_A 474 H 474 (521)
T ss_dssp S
T ss_pred C
Confidence 4
No 57
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=98.50 E-value=1.6e-07 Score=96.39 Aligned_cols=79 Identities=15% Similarity=0.127 Sum_probs=59.6
Q ss_pred ccceeecccccccccCcccceEEEEeCCcEEEEEEEeccC-CCeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCccc
Q 047904 180 LVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAAL-NDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTT 258 (448)
Q Consensus 180 ~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRliNa~~-~~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeRy 258 (448)
...++++||+..+ ++|+++.|+++++|+.|... ...+.+|+||+. ..||... ...|.|||++
T Consensus 47 ~~~~~~~ng~~pg-------p~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~pg~~~ 109 (442)
T 2zoo_A 47 EYVFWSFGETVPG-------SFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAPGHTS 109 (442)
T ss_dssp EEEEEEETTBSSC-------CBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCTTCEE
T ss_pred EEEEEEECCcCCC-------CcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECCCCEE
Confidence 4557888887633 88999999999999999964 357899999975 3688643 2358999999
Q ss_pred ccccCCcceEEEEEEeCC
Q 047904 259 NGTFDNSTVAGILEYERP 276 (448)
Q Consensus 259 dv~~~~~~~~aiL~Y~~~ 276 (448)
+.+|... ..+..-|...
T Consensus 110 ~y~f~~~-~~Gt~~yH~H 126 (442)
T 2zoo_A 110 TFNFKAL-NPGLYIYHCA 126 (442)
T ss_dssp EEEEECC-SCEEEEEECC
T ss_pred EEEEEcC-CCeEEEEecC
Confidence 9877643 3566777754
No 58
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=98.49 E-value=1.4e-06 Score=90.83 Aligned_cols=75 Identities=12% Similarity=0.189 Sum_probs=60.0
Q ss_pred eEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEecCcee----ceeEeeeEEe-cCCcccccccCC-cceEEEEEE
Q 047904 200 MILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYV----KPFETETLLI-APGQTTNGTFDN-STVAGILEY 273 (448)
Q Consensus 200 ~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~DG~~v----~P~~~~~i~i-~~GeRydv~~~~-~~~~aiL~Y 273 (448)
..+.++.|++++++++|......+.||||||.|+|++.+|... .|...|++.| .+|+++.++|.. ..+.-++++
T Consensus 373 ~~~~v~~g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~adnPG~W~~HC 452 (503)
T 1hfu_A 373 SVYELPRNQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHC 452 (503)
T ss_dssp SEEEECSSCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECCSCEEEEEEE
T ss_pred eEEEccCCCEEEEEEECCCCCCCCCEEEecceEEEEecCCCCccccCCCCeeeeEEecCCCceEEEEEEcCCCeeeeEec
Confidence 5789999999999999654466899999999999999999763 5889999999 899999886642 223444444
Q ss_pred e
Q 047904 274 E 274 (448)
Q Consensus 274 ~ 274 (448)
.
T Consensus 453 H 453 (503)
T 1hfu_A 453 H 453 (503)
T ss_dssp S
T ss_pred C
Confidence 3
No 59
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=98.48 E-value=4.5e-07 Score=89.81 Aligned_cols=81 Identities=19% Similarity=0.213 Sum_probs=58.3
Q ss_pred cccceeecccccccccCcccceEEEEeCCcEEEEEEEeccC-CCeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCcc
Q 047904 179 ALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAAL-NDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQT 257 (448)
Q Consensus 179 ~~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRliNa~~-~~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeR 257 (448)
...+++++||+..+ ++|+++.|+++|+|++|... ...+.++++++.. +.||.++. .|.||||
T Consensus 57 ~~~~~~~~ng~~pg-------P~i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~---~~~~~~~~-------~i~PG~~ 119 (340)
T 2bw4_A 57 TEIHAMTFNGSVPG-------PLMVVHENDYVELRLINPDTNTLLHNIDFHAATG---ALGGGALT-------QVNPGEE 119 (340)
T ss_dssp CEEEEEEETTBSSC-------CEEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGGC-------CBCTTEE
T ss_pred cEEEEEEECCCCCC-------CcEEEcCCCEEEEEEEeCCCCCccCcceeCCcCC---CCCCccce-------EeCCCCE
Confidence 34567888887643 89999999999999999973 3567777877652 23443321 3999999
Q ss_pred cccccCCcceEEEEEEeCCC
Q 047904 258 TNGTFDNSTVAGILEYERPP 277 (448)
Q Consensus 258 ydv~~~~~~~~aiL~Y~~~~ 277 (448)
++..|...+ .+..-|....
T Consensus 120 ~~y~~~~~~-~Gt~wyH~h~ 138 (340)
T 2bw4_A 120 TTLRFKATK-PGVFVYHCAP 138 (340)
T ss_dssp EEEEEECCS-CEEEEEECCC
T ss_pred EEEEEECCC-CeEEEEEcCC
Confidence 998776543 6677787653
No 60
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.40 E-value=2.3e-07 Score=97.56 Aligned_cols=56 Identities=20% Similarity=0.371 Sum_probs=49.3
Q ss_pred eCCcCCCceEEEecCCee--------------eecccCCCCCCCCCCccccCCCCCCCeeEEEEEeCCccceeEEeecC
Q 047904 46 LNGKFPGPRIVAREGDQL--------------HGIRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVGRRGKLWWHAHM 110 (448)
Q Consensus 46 ~NG~~PGP~I~v~~Gd~v--------------HGl~~~~~~~~DGvp~vtq~pI~PG~~ftY~f~~~~~~GT~wYH~H~ 110 (448)
+|++||+|+|+|++||+| ||+.+++. |+ ++.|.||++++|.|++ .++|+||||||.
T Consensus 506 ~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~----gv----~~~i~PG~t~t~~Fta-~~pGtY~yhC~e 575 (595)
T 1fwx_A 506 VAPSFSIESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNY----GV----AMEIGPQMTSSVTFVA-ANPGVYWYYCQW 575 (595)
T ss_dssp ETTEESCSEEEEETTCEEEEEEEECCCSTTCCEEEEETTT----TE----EEEECTTCEEEEEEEC-CSCEEEEEECCS
T ss_pred ecCcccCCEEEEECCCEEEEEEEeCCCCCCceeeEEecCC----Cc----ceeeCCCCeEEEEEEC-CCCEEEEEECCC
Confidence 899999999999999999 88887652 32 3679999999999997 899999999993
No 61
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=98.17 E-value=8.6e-06 Score=80.38 Aligned_cols=80 Identities=19% Similarity=0.222 Sum_probs=57.8
Q ss_pred ccceeecccccccccCcccceEEEEeCCcEEEEEEEeccC-CCeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCccc
Q 047904 180 LVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAAL-NDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTT 258 (448)
Q Consensus 180 ~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRliNa~~-~~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeRy 258 (448)
...++++||+..+ ++|+++.|+++++|++|... ...+.++++++.. +.||.++. .|.|||++
T Consensus 52 ~~~~~~~ng~~pg-------P~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~---~~~~~~~~-------~i~pG~~~ 114 (336)
T 1oe1_A 52 TLQAMTFNGSMPG-------PTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATG---ALGGAKLT-------NVNPGEQA 114 (336)
T ss_dssp EEEEEEETTBSSC-------CCEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGGC-------CBCTTEEE
T ss_pred EEEEEEECCccCC-------CeEEEcCCCEEEEEEEcCCCCCccccceECCCCC---CCCCcceE-------EeCCCCEE
Confidence 3456777777533 88999999999999999874 3568889998762 22333321 38999999
Q ss_pred ccccCCcceEEEEEEeCCC
Q 047904 259 NGTFDNSTVAGILEYERPP 277 (448)
Q Consensus 259 dv~~~~~~~~aiL~Y~~~~ 277 (448)
+.+|.... .|..-|....
T Consensus 115 ~y~f~~~~-~Gt~~yH~h~ 132 (336)
T 1oe1_A 115 TLRFKADR-SGTFVYHCAP 132 (336)
T ss_dssp EEEEECCS-CEEEEEECCC
T ss_pred EEEEECCC-CeEEEEecCC
Confidence 98876533 6778887653
No 62
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=98.13 E-value=3.9e-05 Score=79.68 Aligned_cols=75 Identities=15% Similarity=0.178 Sum_probs=59.0
Q ss_pred eEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEecCcee----ceeEeeeEEecC-CcccccccCC-cceEEEEEE
Q 047904 200 MILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYV----KPFETETLLIAP-GQTTNGTFDN-STVAGILEY 273 (448)
Q Consensus 200 ~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~DG~~v----~P~~~~~i~i~~-GeRydv~~~~-~~~~aiL~Y 273 (448)
..+.++.|++++|.|.|......+.||+|||.|+|++.+|... .|...|++.|.+ |+.+.++|.. ..+.-++++
T Consensus 374 ~v~~~~~g~~V~ivl~~n~~~~~HP~HLHGh~F~vl~~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~adnPG~W~~HC 453 (495)
T 3t6v_A 374 SVISLPSNSTIEIALPAGAAGGPHPFHLHGHDFAVSESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHC 453 (495)
T ss_dssp SEEEECTTCEEEEEEECCSSSCCCEEEETTCCEEEEECTTCCCCCSSSCCEESEEECCSTTCEEEEEEECCSCEEEEEEE
T ss_pred ceEEecCCCEEEEEEccCCCCCCcceeecCCcEEEEecCCCCCcccCCCCCccEEEcCCCCcEEEEEEEcCCCeeEEEEe
Confidence 5789999999999998434456799999999999999988754 588899999997 8888877642 234445555
Q ss_pred e
Q 047904 274 E 274 (448)
Q Consensus 274 ~ 274 (448)
.
T Consensus 454 H 454 (495)
T 3t6v_A 454 H 454 (495)
T ss_dssp S
T ss_pred c
Confidence 4
No 63
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.06 E-value=3.9e-06 Score=68.29 Aligned_cols=60 Identities=15% Similarity=0.133 Sum_probs=42.4
Q ss_pred CceEEEecCCee---------eecccCCCCCC--CCCC----ccccCCCCCCCeeEEEEEeCCccceeEEeecCC
Q 047904 52 GPRIVAREGDQL---------HGIRRLRSGWA--DGPA----YITQCPIQTGQSCVYNFTIVGRRGKLWWHAHMT 111 (448)
Q Consensus 52 GP~I~v~~Gd~v---------HGl~~~~~~~~--DGvp----~vtq~pI~PG~~ftY~f~~~~~~GT~wYH~H~~ 111 (448)
-+.|+|++||+| |.++....... +|.. ..+...+.||++++|.|+++..+|+||||||.|
T Consensus 19 P~~i~v~~Gd~V~~~n~~~~~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~~H 93 (106)
T 2gim_A 19 PAKLTIKPGDTVEFLNNKVPPHNVVFDAALNPAKSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCEPH 93 (106)
T ss_dssp SSEEEECTTCEEEEEECSSSCCCBEECSSSSTTCCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECTTT
T ss_pred CCEEEECCCCEEEEEECCCCCceEEEeCCCCcccccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeCCh
Confidence 478999999999 88775442111 1210 012346899999999998546899999999843
No 64
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=97.99 E-value=2.8e-05 Score=76.62 Aligned_cols=81 Identities=22% Similarity=0.226 Sum_probs=54.8
Q ss_pred cccceeecccccccccCcccceEEEEeCCcEEEEEEEeccC-CCeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCcc
Q 047904 179 ALVDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAAL-NDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQT 257 (448)
Q Consensus 179 ~~~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRliNa~~-~~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeR 257 (448)
....++++||+..+ ++|++++|+++|+|++|.+. ...+.++++++. ..||.. +.. .|.|||+
T Consensus 50 ~~~~~~~~ng~~pg-------P~i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~----~~~~~~--~~~----~i~PG~~ 112 (333)
T 1mzy_A 50 AYLQAMTFDGSIPG-------PLMIVHEGDYVELTLINPPENTMPHNIDFHAAT----GALGGG--GLT----LINPGEK 112 (333)
T ss_dssp EEEEEEEETTBSSC-------CEEEEETTCEEEEEEEECTTCCSCBCCEETTSC----SGGGGG--GGC----CBCTTEE
T ss_pred cEEEEEEECCccCC-------CcEEecCCCEEEEEEEECCCCcccccceecCCC----CCCCCC--cee----EeCCCCE
Confidence 34567888988643 89999999999999999963 233555555432 123321 221 3999999
Q ss_pred cccccCCcceEEEEEEeCCC
Q 047904 258 TNGTFDNSTVAGILEYERPP 277 (448)
Q Consensus 258 ydv~~~~~~~~aiL~Y~~~~ 277 (448)
++.+|... ..+..-|....
T Consensus 113 ~~y~f~~~-~~Gt~~yH~h~ 131 (333)
T 1mzy_A 113 VVLRFKAT-RAGAFVYHCAP 131 (333)
T ss_dssp EEEEEECC-SCEEEEEECCC
T ss_pred EEEEEECC-CCEEEEEeecC
Confidence 99987653 36777887653
No 65
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=97.96 E-value=0.00018 Score=75.93 Aligned_cols=75 Identities=13% Similarity=0.130 Sum_probs=56.6
Q ss_pred eEEEEeCCcEEEEEEEeccC----CCeEEEEEcCCeeEEEEecC---------ce------------eceeEeeeEEecC
Q 047904 200 MILKVKPGKTYLLRIINAAL----NDELFFSIANHTLKVVEADV---------VY------------VKPFETETLLIAP 254 (448)
Q Consensus 200 ~~i~v~~G~~~RlRliNa~~----~~~~~~~idgh~~~Vva~DG---------~~------------v~P~~~~~i~i~~ 254 (448)
..+.++.++.+++.+||... ...+.||||||.|+|++.++ .. ..|...|++.|.+
T Consensus 404 ~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~ 483 (559)
T 2q9o_A 404 NIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPA 483 (559)
T ss_dssp CEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECT
T ss_pred eEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccC
Confidence 46888888888887887754 56899999999999999986 32 1467899999999
Q ss_pred CcccccccCC-cceEEEEEEe
Q 047904 255 GQTTNGTFDN-STVAGILEYE 274 (448)
Q Consensus 255 GeRydv~~~~-~~~~aiL~Y~ 274 (448)
|+++.++|.. ..+.-++++.
T Consensus 484 ~g~v~IrF~adNPG~W~~HCH 504 (559)
T 2q9o_A 484 GGWLLLAFRTDNPGAWLFHCH 504 (559)
T ss_dssp TSEEEEEEECCSCEEEEEEEC
T ss_pred CccEEEEEEcCCCeeEEEEec
Confidence 9998886642 2344445544
No 66
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=97.86 E-value=5e-05 Score=80.04 Aligned_cols=85 Identities=16% Similarity=0.151 Sum_probs=61.5
Q ss_pred cceeecccccccccCcccceEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEE-EecCceeceeEeeeEEecCCcccc
Q 047904 181 VDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVV-EADVVYVKPFETETLLIAPGQTTN 259 (448)
Q Consensus 181 ~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vv-a~DG~~v~P~~~~~i~i~~GeRyd 259 (448)
..++++||+..+ ++|+++.|+++++++.|........+|.||-.+.-- ..||.+-. ..-.|.|||++.
T Consensus 22 ~~~~~~Ng~~PG-------P~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~v----tq~~I~PG~s~t 90 (552)
T 1aoz_A 22 NIVMGINGQFPG-------PTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASI----SQCAINPGETFF 90 (552)
T ss_dssp EEEEEETTBSSC-------CCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTT----TBCCBCTTCEEE
T ss_pred EEEEEECCccCC-------CcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccc----ccCCcCCCCeEE
Confidence 346777777643 899999999999999999975678888888543211 15887642 123478999999
Q ss_pred cccCCcceEEEEEEeCCC
Q 047904 260 GTFDNSTVAGILEYERPP 277 (448)
Q Consensus 260 v~~~~~~~~aiL~Y~~~~ 277 (448)
-+|.. ...|..-|....
T Consensus 91 Y~f~~-~~~GT~wYHsH~ 107 (552)
T 1aoz_A 91 YNFTV-DNPGTFFYHGHL 107 (552)
T ss_dssp EEEEC-CSCEEEEEEECS
T ss_pred EEEEC-CCCEEEEEEECc
Confidence 87765 557778887653
No 67
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=97.81 E-value=1.9e-05 Score=81.76 Aligned_cols=74 Identities=9% Similarity=-0.014 Sum_probs=62.3
Q ss_pred eeecccccccccCcccceEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEecCceece---eEeeeEEecCCcccc
Q 047904 183 VILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKP---FETETLLIAPGQTTN 259 (448)
Q Consensus 183 ~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~DG~~v~P---~~~~~i~i~~GeRyd 259 (448)
.+++||+.... ..+.++++.|+++||+|+|.+....+.||||||.|+|++.||.++.| .+.|++.|. ||++.
T Consensus 379 ~~~ING~~~~~----~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~ 453 (488)
T 3od3_A 379 ANKINGQAFDM----NKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSE 453 (488)
T ss_dssp CEEETTBCCCT----TCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEE
T ss_pred eeeECCeeCCC----CCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEE
Confidence 46899986531 12458999999999999999976789999999999999999998754 478999999 99998
Q ss_pred cc
Q 047904 260 GT 261 (448)
Q Consensus 260 v~ 261 (448)
+.
T Consensus 454 i~ 455 (488)
T 3od3_A 454 VL 455 (488)
T ss_dssp EE
T ss_pred EE
Confidence 74
No 68
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=97.81 E-value=5.8e-05 Score=78.44 Aligned_cols=86 Identities=17% Similarity=0.129 Sum_probs=62.8
Q ss_pred cceeecccccccccCcccceEEEEeCCcEEEEEEEeccCC----CeEEEEEcCCeeEE-EEecCceeceeEeeeEEecCC
Q 047904 181 VDVILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAALN----DELFFSIANHTLKV-VEADVVYVKPFETETLLIAPG 255 (448)
Q Consensus 181 ~~~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRliNa~~~----~~~~~~idgh~~~V-va~DG~~v~P~~~~~i~i~~G 255 (448)
-.++++||+..+ |+|+++.|+++++|+.|.... ....+|.||-.+.. -..||.+-. ..-.|.||
T Consensus 22 ~~~~~~NG~~PG-------P~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~v----tq~pI~PG 90 (499)
T 3pxl_A 22 RQAVVVNGVTPG-------PLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFI----NQCPISPG 90 (499)
T ss_dssp EEEEEETTBSSC-------CCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTT----TBCCBCTT
T ss_pred EEEEEECCcccC-------CeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCcc----ccCCCCCC
Confidence 446788888754 899999999999999999865 45788888865432 357886531 11257899
Q ss_pred cccccccCCcceEEEEEEeCCC
Q 047904 256 QTTNGTFDNSTVAGILEYERPP 277 (448)
Q Consensus 256 eRydv~~~~~~~~aiL~Y~~~~ 277 (448)
+++.-+|......|..-|....
T Consensus 91 ~s~tY~f~~~~~~GT~wYHsH~ 112 (499)
T 3pxl_A 91 HSFLYDFQVPDQAGTFWYHSHL 112 (499)
T ss_dssp CEEEEEEECSSCCEEEEEEECS
T ss_pred CeEEEEEEcCCCCceeeeeccc
Confidence 9998877665567788887664
No 69
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=97.69 E-value=0.00011 Score=75.94 Aligned_cols=76 Identities=16% Similarity=0.167 Sum_probs=63.8
Q ss_pred eeecccccccccCcccceEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEe--cCceec---eeEeeeEEecCCcc
Q 047904 183 VILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEA--DVVYVK---PFETETLLIAPGQT 257 (448)
Q Consensus 183 ~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~--DG~~v~---P~~~~~i~i~~GeR 257 (448)
.+.+||+..+. ..+.+.++.|++++|+|+|.+ ...+.||||||.|+|++. ||.... +...|++.|.|||+
T Consensus 372 ~~~iNG~~~~~----~~~~~~~~~G~~v~w~l~N~~-~~~Hp~HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~Pg~~ 446 (481)
T 3zx1_A 372 MFLINRKSYDL----KRIDLSSKLGVVEDWIVINKS-HMDHPFHIHGTQFELISSKLNGKVQKAEFRALRDTINVRPNEE 446 (481)
T ss_dssp TEEETTBCCCT----TCCCEEEETTCCEEEEEEECS-SSCEEEEETTCCEEEEEEEETTEEEECSSCCEESEEEECTTCE
T ss_pred eeEECCEeCCC----CCceEEeCCCCEEEEEEEcCC-CCceeEEEeccEEEEEEecccCCCCCcccCcccceEEECCCCE
Confidence 47899986531 125689999999999999966 567999999999999999 998874 57899999999999
Q ss_pred cccccC
Q 047904 258 TNGTFD 263 (448)
Q Consensus 258 ydv~~~ 263 (448)
+.+.+.
T Consensus 447 ~~i~~~ 452 (481)
T 3zx1_A 447 LRLRMK 452 (481)
T ss_dssp EEEEEC
T ss_pred EEEEEE
Confidence 998554
No 70
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.68 E-value=8.1e-05 Score=63.21 Aligned_cols=68 Identities=13% Similarity=0.221 Sum_probs=47.5
Q ss_pred EEEEEEEEEEeeCCcCCCceEEEecCCee---------eecccCCCCCCCCCCccccCCCCCCCeeEEEEEeCCccceeE
Q 047904 35 RHYEFDIKLQNLNGKFPGPRIVAREGDQL---------HGIRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVGRRGKLW 105 (448)
Q Consensus 35 ~~~~l~i~~~~~NG~~PGP~I~v~~Gd~v---------HGl~~~~~~~~DGvp~vtq~pI~PG~~ftY~f~~~~~~GT~w 105 (448)
+.+++++. +-.|=-+.|+|++||+| |.+..... .+|........+.||++++|.| .++|+||
T Consensus 46 ~~~~V~~~----~~~F~P~~i~V~~GdtV~~~N~d~~~H~v~~~~~--~~g~~~~~s~~l~pG~t~~~tF---~~~G~y~ 116 (132)
T 3c75_A 46 DAVVVGIE----KMKYLTPEVTIKAGETVYWVNGEVMPHNVAFKKG--IVGEDAFRGEMMTKDQAYAITF---NEAGSYD 116 (132)
T ss_dssp TSEEEEEE----TTEESSSEEEECTTCEEEEEECSSSCBCCEECTT--TSSSSCEECCCBCTTEEEEEEE---CSCEEEE
T ss_pred ccEEEEEe----eeEEeCCEEEECCCCEEEEEECCCCceEEEEeCC--CCCcccccccccCCCCEEEEEc---CCCEEEE
Confidence 34666653 34454479999999999 87775432 3343334445689999999988 4689999
Q ss_pred EeecCC
Q 047904 106 WHAHMT 111 (448)
Q Consensus 106 YH~H~~ 111 (448)
|||-.|
T Consensus 117 y~C~~H 122 (132)
T 3c75_A 117 YFCTPH 122 (132)
T ss_dssp EECSSC
T ss_pred EEeCCC
Confidence 998654
No 71
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=97.55 E-value=0.0006 Score=71.97 Aligned_cols=73 Identities=18% Similarity=0.089 Sum_probs=53.8
Q ss_pred eEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEE-EEecCceeceeEeeeEEecCCcccccccCCcceEEEEEEeCCC
Q 047904 200 MILKVKPGKTYLLRIINAALNDELFFSIANHTLKV-VEADVVYVKPFETETLLIAPGQTTNGTFDNSTVAGILEYERPP 277 (448)
Q Consensus 200 ~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~V-va~DG~~v~P~~~~~i~i~~GeRydv~~~~~~~~aiL~Y~~~~ 277 (448)
|+|+++.|+++++++.|........+|.||-...- -..||.+-. ..-.|.||+++.-+|... ..|..-|....
T Consensus 98 P~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~v----Tq~pI~PG~sftY~f~~~-q~GT~WYHsH~ 171 (580)
T 3sqr_A 98 PAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGV----TQCPIAPGDTLTYKFQVT-QYGTTWYHSHF 171 (580)
T ss_dssp CCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTT----TBCCBCTTCEEEEEEECC-CCEEEEEEECS
T ss_pred ceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCcc----ccCCCCCCCeEEEEEECC-CCcceEEeecc
Confidence 89999999999999999986566788888865421 356887631 122489999998777653 46778887663
No 72
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=97.53 E-value=5.8e-05 Score=60.19 Aligned_cols=56 Identities=14% Similarity=0.194 Sum_probs=39.5
Q ss_pred ceEEEecCCee---------eecccCCCCCCCCCCcc--ccCCCCCCCeeEEEEEeCCccceeEEeecCC
Q 047904 53 PRIVAREGDQL---------HGIRRLRSGWADGPAYI--TQCPIQTGQSCVYNFTIVGRRGKLWWHAHMT 111 (448)
Q Consensus 53 P~I~v~~Gd~v---------HGl~~~~~~~~DGvp~v--tq~pI~PG~~ftY~f~~~~~~GT~wYH~H~~ 111 (448)
+.|+|++||+| |.+........+|..++ ....+.||+++++.| ..+|+|+|||+.|
T Consensus 19 ~~i~v~~G~~V~~~n~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H 85 (97)
T 1b3i_A 19 KALSISAGDTVEFVMNKVGPHNVIFDKVPAGESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCTPH 85 (97)
T ss_dssp SEEEECTTCEEEEEECSSCCCCBEEEECCTTSCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECSST
T ss_pred CEEEECCCCEEEEEECCCCCeEEEEeCCCCccccccccccceecCCCCEEEEEe---CCCeEEEEEccCh
Confidence 58999999999 88776543222222111 224589999999988 4799999999854
No 73
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=97.49 E-value=5.4e-05 Score=60.43 Aligned_cols=57 Identities=12% Similarity=0.151 Sum_probs=39.6
Q ss_pred CceEEEecCCee---------eecccCCCCCCCCCCc----cccCCCCCCCeeEEEEEeCCccceeEEeecCC
Q 047904 52 GPRIVAREGDQL---------HGIRRLRSGWADGPAY----ITQCPIQTGQSCVYNFTIVGRRGKLWWHAHMT 111 (448)
Q Consensus 52 GP~I~v~~Gd~v---------HGl~~~~~~~~DGvp~----vtq~pI~PG~~ftY~f~~~~~~GT~wYH~H~~ 111 (448)
-+.|+|++||+| |.++......-+|.-. .+...+.||+++++.|+ ++|+||||||.|
T Consensus 17 P~~i~v~~G~~V~~~n~~~~~H~~~~~~~~~p~~~~~~~~~~~~~~~~pG~~~~~tf~---~~G~y~y~C~~H 86 (98)
T 2plt_A 17 PKTLTIKSGETVNFVNNAGFPHNIVFDEDAIPSGVNADAISRDDYLNAPGETYSVKLT---AAGEYGYYCEPH 86 (98)
T ss_dssp SSEEEECTTCEEEEEECSSCCEEEEECGGGSCTTCCHHHHCEEEEECSTTCEEEEECC---SCEEEEEECGGG
T ss_pred CCEEEECCCCEEEEEECCCCceEEEEeCCCCCCccccccccccceecCCCCEEEEEeC---CCeEEEEEcCCc
Confidence 368999999999 8877654322233210 01235899999999884 699999999843
No 74
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=97.46 E-value=0.00018 Score=76.33 Aligned_cols=86 Identities=7% Similarity=-0.060 Sum_probs=64.8
Q ss_pred eeecccccccccCcccceEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEecCc----------------------
Q 047904 183 VILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVV---------------------- 240 (448)
Q Consensus 183 ~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~DG~---------------------- 240 (448)
.+.+||+... +...++++.|++++|+|+|.+ ...+.||||+|.|+|++.+|.
T Consensus 460 ~~~iNG~~~~-----~~~~~~v~~G~~v~w~l~N~~-~~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~ 533 (612)
T 2g23_A 460 TYRRTAATFN-----DGLGFTIGEGTHEQWTFLNLS-PILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDT 533 (612)
T ss_dssp EEEEEECSTT-----SCCCEEEETTCEEEEEEEECS-SSCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEE
T ss_pred EEEECCccCC-----CCCceEecCCCEEEEEEEeCC-CCCCCeEEcCceEEEecccCcccccccccccCccccccccccc
Confidence 4678887653 236789999999999999998 567999999999999987542
Q ss_pred --ee---ceeEeeeEEecCCcccccccCC--cceEEEEEEe
Q 047904 241 --YV---KPFETETLLIAPGQTTNGTFDN--STVAGILEYE 274 (448)
Q Consensus 241 --~v---~P~~~~~i~i~~GeRydv~~~~--~~~~aiL~Y~ 274 (448)
++ ++...|++.|.|||++.+.+.- ..+.-++++.
T Consensus 534 ~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCH 574 (612)
T 2g23_A 534 PVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCH 574 (612)
T ss_dssp ECCCCTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEES
T ss_pred ccCCCcccccccCeEEECCCcEEEEEEEeCCCCccEEEEeC
Confidence 11 1236899999999999985432 3445555554
No 75
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=97.41 E-value=0.00019 Score=73.61 Aligned_cols=74 Identities=18% Similarity=0.149 Sum_probs=59.7
Q ss_pred eeecccccccccCcccceEEE-EeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEecCcee------------ce---eE
Q 047904 183 VILSNQEYIGEMNAGRDMILK-VKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYV------------KP---FE 246 (448)
Q Consensus 183 ~~~~ng~~~~~~~~~~~~~i~-v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~DG~~v------------~P---~~ 246 (448)
.+.+||+.... ..+.+. ++.|++++|+|.|.+....+.||||||.|+|++.+|.+. .| ..
T Consensus 325 ~~~iNg~~~~~----~~p~~~~~~~g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl~~~G~~~~~~~~~~~~~~~~p~~~~~ 400 (448)
T 3aw5_A 325 QWTINGMFWNA----SNPLFEHVSVEGVELWEIVNDKASMPHPMHLHGFPMWIIERKDSPRQVAELAVDNRGRLPTDLGL 400 (448)
T ss_dssp EEEETTBCCCT----TCTTCCCEEECEEEEEEEEECSSSCCEEEEESSSCBEEEEEESCCHHHHTTCCSTTCCCGGGGSC
T ss_pred eeeECCCcCCC----CCCceeccCCCCeEEEEEEcCCCCCCcCEEECCceEEEEEecCCCcccccccccccCCCccccCC
Confidence 37788886531 113356 889999999999988556799999999999999999875 23 57
Q ss_pred eeeEEecCCccccc
Q 047904 247 TETLLIAPGQTTNG 260 (448)
Q Consensus 247 ~~~i~i~~GeRydv 260 (448)
.|++.|.+|+++.+
T Consensus 401 rDTv~v~pg~~~~i 414 (448)
T 3aw5_A 401 KDTVLIWPGETVKI 414 (448)
T ss_dssp BSEEEECTTCEEEE
T ss_pred ccEEEeCCCCEEEE
Confidence 89999999999876
No 76
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=97.39 E-value=9.8e-05 Score=57.93 Aligned_cols=56 Identities=14% Similarity=0.210 Sum_probs=39.6
Q ss_pred cCCCceEEEecCCee---------eecccCCCCCCCCCCccccCCCCCCCeeEEEEEeCCccceeEEeecCC
Q 047904 49 KFPGPRIVAREGDQL---------HGIRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVGRRGKLWWHAHMT 111 (448)
Q Consensus 49 ~~PGP~I~v~~Gd~v---------HGl~~~~~~~~DGvp~vtq~pI~PG~~ftY~f~~~~~~GT~wYH~H~~ 111 (448)
.|--+.|++++||+| |.+...... + .+.....+.||+++++.| ..+|+||||||.|
T Consensus 15 ~f~P~~i~v~~Gd~V~~~n~~~~~H~v~~~~~~--~--~~~~~~~~~~g~~~~~~f---~~~G~y~~~C~~H 79 (91)
T 1bxv_A 15 AFEPSTIEIQAGDTVQWVNNKLAPHNVVVEGQP--E--LSHKDLAFSPGETFEATF---SEPGTYTYYCEPH 79 (91)
T ss_dssp SEESSEEEECTTCEEEEEECSSCCEEEEETTCG--G--GCEEEEECSTTCEEEEEC---CSCEEEEEECTTT
T ss_pred EEeCCEEEECCCCEEEEEECCCCCcEEEEeCCC--c--cCcccceeCCCCEEEEEe---CCCEEEEEEeCCC
Confidence 344468999999999 777754311 0 011234589999998877 5699999999854
No 77
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=97.37 E-value=0.00018 Score=57.52 Aligned_cols=56 Identities=11% Similarity=0.105 Sum_probs=40.3
Q ss_pred ceEEEecCCee---------eecccCCCCCCCCCCc------cccCCCCCCCeeEEEEEeCCccceeEEeecCC
Q 047904 53 PRIVAREGDQL---------HGIRRLRSGWADGPAY------ITQCPIQTGQSCVYNFTIVGRRGKLWWHAHMT 111 (448)
Q Consensus 53 P~I~v~~Gd~v---------HGl~~~~~~~~DGvp~------vtq~pI~PG~~ftY~f~~~~~~GT~wYH~H~~ 111 (448)
+.|+|++||+| |.++.....+.+|... .....+.||+++++.|+ .+|+|+|||+.|
T Consensus 17 ~~i~v~~G~tV~~~n~~~~~H~~~~~~~~~p~g~~~~~~~~~~~~~~~~~G~~~~~~f~---~~G~y~~~C~~H 87 (99)
T 1byp_A 17 SDLSIASGEKITFKNNAGFPHNDLFDKKEVPAGVDVTKISMPEEDLLNAPGEEYSVTLT---EKGTYKFYCAPH 87 (99)
T ss_dssp SEEEECTTEEEEEEECSSCCBCCEECTTSSCTTCCHHHHSCCTTCCBCSTTCEEEEEEC---SCEEEEEECGGG
T ss_pred CEEEECCCCEEEEEECCCCcceEEEeCCCCccccccccccccccceeeCCCCEEEEEeC---CCcEEEEEcCCc
Confidence 47999999999 8887665434444321 11235789999999884 699999999854
No 78
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=97.37 E-value=0.00018 Score=57.57 Aligned_cols=57 Identities=11% Similarity=0.132 Sum_probs=40.1
Q ss_pred CceEEEecCCee---------eecccCCCCCCCCCCc------cccCCCCCCCeeEEEEEeCCccceeEEeecCC
Q 047904 52 GPRIVAREGDQL---------HGIRRLRSGWADGPAY------ITQCPIQTGQSCVYNFTIVGRRGKLWWHAHMT 111 (448)
Q Consensus 52 GP~I~v~~Gd~v---------HGl~~~~~~~~DGvp~------vtq~pI~PG~~ftY~f~~~~~~GT~wYH~H~~ 111 (448)
-+.|+|++||+| |.+......+-+|... -....+.||+++++.|+ .+|+|+|||+.|
T Consensus 16 P~~i~v~~G~tV~~~n~~~~~H~v~~~~~~~p~~~~~~~~~~~~~~~~~~~G~~~~~tf~---~~G~y~~~C~~H 87 (99)
T 1plc_A 16 PSEFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETFEVALS---NKGEYSFYCSPH 87 (99)
T ss_dssp SSEEEECTTCEEEEEECSSCCBCCEECTTSSCTTCCHHHHCCCTTCCBCSTTCEEEEECC---SCEEEEEECGGG
T ss_pred CCEEEECCCCEEEEEECCCCceEEEEeCCCCcccccccccccccCccccCCCCEEEEEEC---CCceEEEEcCCC
Confidence 358999999999 8887654333343310 01234799999998884 699999999844
No 79
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=97.36 E-value=0.00019 Score=57.71 Aligned_cols=54 Identities=15% Similarity=0.109 Sum_probs=38.7
Q ss_pred CceEEEecCCee---------eecccCCCCCCCCC----------Ccc--ccCCCCCCCeeEEEEEeCCccceeEEeecC
Q 047904 52 GPRIVAREGDQL---------HGIRRLRSGWADGP----------AYI--TQCPIQTGQSCVYNFTIVGRRGKLWWHAHM 110 (448)
Q Consensus 52 GP~I~v~~Gd~v---------HGl~~~~~~~~DGv----------p~v--tq~pI~PG~~ftY~f~~~~~~GT~wYH~H~ 110 (448)
-+.|+|++||+| |.+.... .+|. +++ ....+.||+++++.| ..+|+|||||+.
T Consensus 16 P~~i~v~~G~tV~~~n~~~~~H~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~ 89 (102)
T 1kdj_A 16 PDSITVSAGEAVEFTLVGETGHNIVFDI---PAGAPGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTYTFYCTP 89 (102)
T ss_dssp SSEEEECTTCCEEEEECSSSCBCCEECC---CTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEEEEECST
T ss_pred CCEEEECCCCEEEEEECCCCCeEEEEeC---cccccccccchhhcccccccceecCCCCEEEEEe---CCCeEEEEEeCC
Confidence 368999999999 8776542 1222 122 234589999999988 479999999984
Q ss_pred C
Q 047904 111 T 111 (448)
Q Consensus 111 ~ 111 (448)
|
T Consensus 90 H 90 (102)
T 1kdj_A 90 H 90 (102)
T ss_dssp T
T ss_pred C
Confidence 4
No 80
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=97.35 E-value=0.00012 Score=58.32 Aligned_cols=53 Identities=15% Similarity=0.192 Sum_probs=38.8
Q ss_pred CceEEEecCCee---------eecccCCCCCCCCCCcc-------ccCCCCCCCeeEEEEEeCCccceeEEeecCC
Q 047904 52 GPRIVAREGDQL---------HGIRRLRSGWADGPAYI-------TQCPIQTGQSCVYNFTIVGRRGKLWWHAHMT 111 (448)
Q Consensus 52 GP~I~v~~Gd~v---------HGl~~~~~~~~DGvp~v-------tq~pI~PG~~ftY~f~~~~~~GT~wYH~H~~ 111 (448)
-+.|+|++||+| |.++.... +.|+. ....+.||+++++.| ..+|+||||||.|
T Consensus 18 P~~i~v~~G~~V~~~n~~~~~H~~~~~~~----~~pg~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~~~C~~H 86 (98)
T 1pcs_A 18 PSTVTIKAGEEVKWVNNKLSPHNIVFDAD----GVPADTAAKLSHKGLLFAAGESFTSTF---TEPGTYTYYCEPH 86 (98)
T ss_dssp SSEEEECTTCEEEEEECSSCCEEEEECCS----SSCHHHHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECGGG
T ss_pred CCEEEECCCCEEEEEECCCCCcEEEEeCC----CCCccccccccccccccCCCCEEEEEc---CCCeEEEEEcCCc
Confidence 358999999999 88876532 12211 234589999999988 4699999999844
No 81
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=97.24 E-value=0.00041 Score=58.09 Aligned_cols=54 Identities=17% Similarity=0.280 Sum_probs=38.3
Q ss_pred CceEEEecCCee--------eecccCCCCCCCCCCccccCCCCCCCeeEEEEEeCCccceeEEeecCC
Q 047904 52 GPRIVAREGDQL--------HGIRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVGRRGKLWWHAHMT 111 (448)
Q Consensus 52 GP~I~v~~Gd~v--------HGl~~~~~~~~DGvp~vtq~pI~PG~~ftY~f~~~~~~GT~wYH~H~~ 111 (448)
-..|+|++||+| |.+......+-+|. ...-+.||++|+|.| +.+|+|||||-.|
T Consensus 21 P~~i~V~~GDTV~f~n~~~~Hnv~~~~~~~p~g~---~~~~~~pg~t~s~TF---~~~G~y~Y~C~~H 82 (124)
T 3ef4_A 21 PGFVKVEAGDTVKFVPTDKSHNAESVREVWPEGV---APVKGGFSKEVVFNA---EKEGLYVLKCAPH 82 (124)
T ss_dssp SSEEEECTTCEEEEECSSSSCCCEECTTTSCTTS---CCCBCCTTCCEEEEC---CSSEEEEEECTTT
T ss_pred CCEEEECCCCEEEEEECCCCccEEEeCCcCCCCc---cccccCCCCEEEEEe---CCCeEEEEEcCCC
Confidence 359999999999 77765432222332 223467999999988 4689999999643
No 82
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=97.23 E-value=0.00038 Score=58.57 Aligned_cols=54 Identities=15% Similarity=0.258 Sum_probs=38.4
Q ss_pred CceEEEecCCee--------eecccCCCCCCCCCCccccCCCCCCCeeEEEEEeCCccceeEEeecCC
Q 047904 52 GPRIVAREGDQL--------HGIRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVGRRGKLWWHAHMT 111 (448)
Q Consensus 52 GP~I~v~~Gd~v--------HGl~~~~~~~~DGvp~vtq~pI~PG~~ftY~f~~~~~~GT~wYH~H~~ 111 (448)
-+.|+|++||+| |++......+-||.. ..-+.||++|+|.| +.+|+|||||-.|
T Consensus 22 P~~i~V~~GDtVtf~n~~~~H~v~~~~~~~P~g~~---~f~s~pGet~s~TF---~~pG~y~y~C~~H 83 (127)
T 3tu6_A 22 PAVIRAQPGDTVTFVAKDKGHNSALMKGGAPEGAE---TWKGKINEEITVTL---SKPGVYMYQCAPH 83 (127)
T ss_dssp SSEEEECTTCEEEEECSSSSCCCEECTTCSCTTCC---CCBCCTTCCCEEEC---CSCEEEEEECTTT
T ss_pred CCEEEECCCCEEEEEECCCCceEEEccCcCCCCcc---ceecCCCCEEEEEe---CCCeEEEEEeCCC
Confidence 469999999999 887653321223321 23357999999988 4689999999744
No 83
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=97.20 E-value=0.00042 Score=57.98 Aligned_cols=54 Identities=13% Similarity=0.161 Sum_probs=38.8
Q ss_pred CceEEEecCCee--------eecccCCCCCCCCCCccccCCCCCCCeeEEEEEeCCccceeEEeecCC
Q 047904 52 GPRIVAREGDQL--------HGIRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVGRRGKLWWHAHMT 111 (448)
Q Consensus 52 GP~I~v~~Gd~v--------HGl~~~~~~~~DGvp~vtq~pI~PG~~ftY~f~~~~~~GT~wYH~H~~ 111 (448)
-..|+|++||+| |++......+-||.. ..-+.||++|+|.| +.+|+|||+|-.|
T Consensus 20 P~~i~V~~GdtV~f~~~~~~H~v~~~~~~~P~g~~---~f~~~pg~t~s~TF---~~pG~y~y~C~~H 81 (123)
T 3erx_A 20 PAFVRAEPGDVINFVPTDKSHNVEAIKEILPEGVE---SFKSKINESYTLTV---TEPGLYGVKCTPH 81 (123)
T ss_dssp SSEEEECTTEEEEEEESSTTCCCEECTTSSCTTCC---CCBCCTTCCEEEEE---CSCEEEEEECGGG
T ss_pred CCEEEECCCCEEEEEECCCCceEEEcCCcCCCCcc---ceecCCCCEEEEEe---CCCeEEEEEeCCC
Confidence 358999999999 887754322234431 23357999999988 4689999999744
No 84
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=97.12 E-value=0.00031 Score=56.36 Aligned_cols=56 Identities=11% Similarity=0.083 Sum_probs=42.2
Q ss_pred CCcCCCceEEEecCCee-----------eecccCCCCCCCCCCccccCCCCCCCeeEEEEEeCCccceeEEeecCC
Q 047904 47 NGKFPGPRIVAREGDQL-----------HGIRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVGRRGKLWWHAHMT 111 (448)
Q Consensus 47 NG~~PGP~I~v~~Gd~v-----------HGl~~~~~~~~DGvp~vtq~pI~PG~~ftY~f~~~~~~GT~wYH~H~~ 111 (448)
|..|--..|++++||+| |++..... +. ...+.||++.+|.|+. ..+|+|.|+|..|
T Consensus 22 ~~~F~P~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~----~~----~~~~~pg~~~~~~~t~-~~~G~Y~y~C~~H 88 (100)
T 4hci_A 22 DDYFNPNVITIPINESTTLLLKNKGKSEHTFTIKKL----GI----DVVVESGKEKNITVKP-KSAGTYELICRYH 88 (100)
T ss_dssp TTEEESSEEEECTTSCEEEEEEECSSSCEEEEEGGG----TE----EEEECTTCEEEEEECC-CSCEEEEEECTTT
T ss_pred CCEEeCCEEEECCCCEEEEEEEcCCCceEEEEEecC----Cc----ceeecCCcceeEEEec-ccCceEEEECccc
Confidence 45664558999999999 77665432 11 1347899999999996 8999999999654
No 85
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=96.97 E-value=0.0013 Score=55.96 Aligned_cols=28 Identities=11% Similarity=0.137 Sum_probs=24.8
Q ss_pred CCCCCCeeEEEEEeCCccceeEEeecCCC
Q 047904 84 PIQTGQSCVYNFTIVGRRGKLWWHAHMTC 112 (448)
Q Consensus 84 pI~PG~~ftY~f~~~~~~GT~wYH~H~~~ 112 (448)
.|.||+++++.|++ .++|+||||||..+
T Consensus 100 ~l~pGet~~v~f~~-~~pG~y~f~C~~~~ 127 (139)
T 2aan_A 100 LANGNETVEVTFTA-PAAGTYLYICTVPG 127 (139)
T ss_dssp CBCTTCEEEEEEEC-CSSEEEEEECCSTT
T ss_pred ccCCCCEEEEEEEC-CCCeEEEEEcCCCC
Confidence 38999999999997 68999999999653
No 86
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=96.93 E-value=0.00089 Score=53.38 Aligned_cols=57 Identities=14% Similarity=0.124 Sum_probs=39.6
Q ss_pred CceEEEecCCee---------eecccCCCCCCCCCCc----cccCCCCCCCeeEEEEEeCCccceeEEeecCC
Q 047904 52 GPRIVAREGDQL---------HGIRRLRSGWADGPAY----ITQCPIQTGQSCVYNFTIVGRRGKLWWHAHMT 111 (448)
Q Consensus 52 GP~I~v~~Gd~v---------HGl~~~~~~~~DGvp~----vtq~pI~PG~~ftY~f~~~~~~GT~wYH~H~~ 111 (448)
-+.|+|++||+| |.+......+-+|.-. .+...+.||+++++.| ..+|+|||+|-.|
T Consensus 17 P~~i~v~~GdtV~~~n~~~~~H~v~~~~~~~p~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H 86 (98)
T 1iuz_A 17 PSKISVAAGEAIEFVNNAGFPHNIVFDEDAVPAGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCEPH 86 (98)
T ss_dssp SSEEEECTTCEEEEEECSSCCEEEEECTTSSCTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECTTT
T ss_pred CCEEEECCCCEEEEEECCCCCEEEEEeCCCCccccccccccccccccCCCCEEEEEc---CCCEEEEEEchhh
Confidence 458999999999 8887654322333310 0112478999999888 4799999999654
No 87
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=96.90 E-value=0.0011 Score=69.50 Aligned_cols=90 Identities=13% Similarity=0.035 Sum_probs=64.5
Q ss_pred eeecccccccccCcccceEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEe-cCc---eece---eEeeeEEecCC
Q 047904 183 VILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEA-DVV---YVKP---FETETLLIAPG 255 (448)
Q Consensus 183 ~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~-DG~---~v~P---~~~~~i~i~~G 255 (448)
.+.+||+....-. ....+.++.|++++|+|.|.+....+.||||||.|+|++. +|. ...| ...|++.|.||
T Consensus 360 ~w~iNG~~f~~~~--~p~l~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~~~~~~~~~~rDTV~v~pg 437 (534)
T 3abg_A 360 TWTINGVAFADVQ--NRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMPYESGLKDVVWLGRR 437 (534)
T ss_dssp TTCCCCBTTBCTT--SCCCCEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSSCCCSGGGSCBSEECCCSS
T ss_pred eeEECCcccCCCC--CcceeeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcCcCCccccCCcCeEEcCCC
Confidence 4678887653110 1124678999999999999986668999999999999998 673 2222 46899999999
Q ss_pred cccccccC--CcceEEEEEEe
Q 047904 256 QTTNGTFD--NSTVAGILEYE 274 (448)
Q Consensus 256 eRydv~~~--~~~~~aiL~Y~ 274 (448)
+++.+.+. ...+.-++++.
T Consensus 438 ~~v~I~~~~adnpG~w~~HCH 458 (534)
T 3abg_A 438 ETVVVEAHYAPFPGVYMFHCH 458 (534)
T ss_dssp EEEEEEEECCSCCEEEEEEES
T ss_pred CEEEEEEEECCCCccEEEecC
Confidence 99988643 33344444443
No 88
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=96.88 E-value=0.0017 Score=67.58 Aligned_cols=86 Identities=16% Similarity=0.108 Sum_probs=63.0
Q ss_pred eeecccccccccCcccceEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEecCc---------------ee-----
Q 047904 183 VILSNQEYIGEMNAGRDMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVV---------------YV----- 242 (448)
Q Consensus 183 ~~~~ng~~~~~~~~~~~~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~DG~---------------~v----- 242 (448)
.+++||+... ....+.++.|++++|+|+|.+. ..+.||||||.|+|++.+|. +.
T Consensus 385 ~~~iNg~~~~-----~~~~~~~~~g~~~~w~l~N~~~-~~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (513)
T 2wsd_A 385 VLLLNNKRWH-----DPVTETPKVGTTEIWSIINPTR-GTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPP 458 (513)
T ss_dssp EEEETTBCTT-----SCCCBCCBTTCEEEEEEEECSS-SCEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCG
T ss_pred eEeECCccCC-----CcccEecCCCCEEEEEEEcCCC-CCcCEeEeCceEEEEEecCcccccccccccccccCCCCCCCc
Confidence 3568887642 1245688999999999999874 57999999999999998762 11
Q ss_pred -ceeEeeeEEecCCccccc--ccCCcceEEEEEEe
Q 047904 243 -KPFETETLLIAPGQTTNG--TFDNSTVAGILEYE 274 (448)
Q Consensus 243 -~P~~~~~i~i~~GeRydv--~~~~~~~~aiL~Y~ 274 (448)
+|...|++.|.+|+++.+ +|+...+.-++++.
T Consensus 459 ~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCH 493 (513)
T 2wsd_A 459 SEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCH 493 (513)
T ss_dssp GGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEES
T ss_pred cccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcC
Confidence 235789999999998765 45333444555554
No 89
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=96.85 E-value=0.0035 Score=65.57 Aligned_cols=74 Identities=12% Similarity=0.177 Sum_probs=58.1
Q ss_pred eEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEecCc--------------------eeceeEeeeEEecCCcccc
Q 047904 200 MILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVV--------------------YVKPFETETLLIAPGQTTN 259 (448)
Q Consensus 200 ~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~DG~--------------------~v~P~~~~~i~i~~GeRyd 259 (448)
..+.++.|++++|.|.|.+ ...+.||+|||.|+|++.++. +..|...|++.|.+|+.+.
T Consensus 370 ~~~~~~~g~~v~ivi~N~~-~~~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~ 448 (534)
T 1zpu_A 370 HTFILEKDEIVEIVLNNQD-TGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFV 448 (534)
T ss_dssp CEEEECTTCEEEEEEEECS-SSCEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEE
T ss_pred eEEEeCCCCEEEEEEeCCC-CCCCCeEecCCceEEEeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCEEE
Confidence 4689999999999999987 467999999999999998853 1247789999999999988
Q ss_pred cccCC-cceEEEEEEe
Q 047904 260 GTFDN-STVAGILEYE 274 (448)
Q Consensus 260 v~~~~-~~~~aiL~Y~ 274 (448)
++|.. ..+.-++++.
T Consensus 449 IrF~aDNPG~W~~HCH 464 (534)
T 1zpu_A 449 IRFKADNPGVWFFHCH 464 (534)
T ss_dssp EEEECCSCEEEEEEEC
T ss_pred EEEEeCCCeeEEEEeC
Confidence 76642 2334444443
No 90
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=96.80 E-value=0.0017 Score=54.21 Aligned_cols=54 Identities=20% Similarity=0.402 Sum_probs=38.3
Q ss_pred CceEEEecCCee--------eecccCCCCCCCCCCccccCCCCCCCeeEEEEEeCCccceeEEeecCC
Q 047904 52 GPRIVAREGDQL--------HGIRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVGRRGKLWWHAHMT 111 (448)
Q Consensus 52 GP~I~v~~Gd~v--------HGl~~~~~~~~DGvp~vtq~pI~PG~~ftY~f~~~~~~GT~wYH~H~~ 111 (448)
-+.|+|++||+| |.+......+-||... .-+.||++++|.| +.+|+|||+|-.|
T Consensus 20 P~~i~V~~GdtV~f~n~~~~H~v~~~~~~~p~~~~~---~~~~pG~t~~~tF---~~~G~y~y~C~~H 81 (123)
T 1pmy_A 20 PALVRLKPGDSIKFLPTDKGHNVETIKGMAPDGADY---VKTTVGQEAVVKF---DKEGVYGFKCAPH 81 (123)
T ss_dssp SSEEEECTTCEEEEECSSSSCCCEECTTSSCTTCCC---CBCCTTSCEEEEC---CSCEEEEEECSTT
T ss_pred CCEEEECCCCEEEEEECCCCcEEEEecccCCCCccc---eecCCCCEEEEEe---CCCeEEEEEeCCc
Confidence 468999999999 8776543222344321 2357999988888 4699999999644
No 91
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=96.78 E-value=0.0019 Score=53.96 Aligned_cols=54 Identities=15% Similarity=0.233 Sum_probs=37.6
Q ss_pred CceEEEecCCee--------eecccCCCCCCCCCCccccCCCCCCCeeEEEEEeCCccceeEEeecCC
Q 047904 52 GPRIVAREGDQL--------HGIRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVGRRGKLWWHAHMT 111 (448)
Q Consensus 52 GP~I~v~~Gd~v--------HGl~~~~~~~~DGvp~vtq~pI~PG~~ftY~f~~~~~~GT~wYH~H~~ 111 (448)
-+.|+|++||+| |.+......+-||... ....||++++|.| +.+|+|||+|-.|
T Consensus 20 P~~i~V~~GdtV~f~~~~~~H~v~~~~~~~p~~~~~---~~~~pG~t~~~tF---~~~G~y~y~C~~H 81 (123)
T 1paz_A 20 PAYIKANPGDTVTFIPVDKGHNVESIKDMIPEGAEK---FKSKINENYVLTV---TQPGAYLVKCTPH 81 (123)
T ss_dssp SSEEEECTTCEEEEEESSSSCCCEECTTCSCTTCCC---CBCCTTCCEEEEC---CSCEEEEEECTTT
T ss_pred CCEEEECCCCEEEEEECCCCeEEEEecccCCCCccc---eecCCCCEEEEEe---CCCEEEEEEeCCc
Confidence 468999999999 8877532222244322 2246899988888 4699999999643
No 92
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=96.73 E-value=0.0019 Score=53.83 Aligned_cols=54 Identities=13% Similarity=0.202 Sum_probs=38.3
Q ss_pred CceEEEecCCee--------eecccCCCCCCCCCCccccCCCCCCCeeEEEEEeCCccceeEEeecCC
Q 047904 52 GPRIVAREGDQL--------HGIRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVGRRGKLWWHAHMT 111 (448)
Q Consensus 52 GP~I~v~~Gd~v--------HGl~~~~~~~~DGvp~vtq~pI~PG~~ftY~f~~~~~~GT~wYH~H~~ 111 (448)
-+.|+|++||+| |++......+-+|.. ..-+.||++++|.| +.+|+|||+|-.|
T Consensus 20 P~~i~V~~GdtV~f~n~d~~H~v~~~~~~~p~~~~---~~~~~~g~t~~~tF---~~~G~y~y~C~~H 81 (122)
T 2ux6_A 20 PASLKVAPGDTVTFIPTDKGHNVETIKGMIPDGAE---AFKSKINENYKVTF---TAPGVYGVKCTPH 81 (122)
T ss_dssp SSEEEECTTEEEEEEESSSSCCCEECTTCSCTTCC---CCBCCTTCCEEEEE---CSCEEEEEEETTE
T ss_pred CCEEEECCCCEEEEEECCCCcEEEEcccccCCCcc---eeecCCCCEEEEEe---CCCEEEEEEeCCC
Confidence 358999999999 887764321223321 12357899999988 4689999999754
No 93
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=96.73 E-value=0.0023 Score=51.80 Aligned_cols=67 Identities=13% Similarity=0.226 Sum_probs=43.9
Q ss_pred EEEEEEEEEeeCCcCCCceEEEecCCee---------eecccCCCCCCCCCCccccCCCCCCCeeEEEEEeCCccceeEE
Q 047904 36 HYEFDIKLQNLNGKFPGPRIVAREGDQL---------HGIRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVGRRGKLWW 106 (448)
Q Consensus 36 ~~~l~i~~~~~NG~~PGP~I~v~~Gd~v---------HGl~~~~~~~~DGvp~vtq~pI~PG~~ftY~f~~~~~~GT~wY 106 (448)
.+++++. +..|=-+.|+|++||+| |++..... ..|........+.||+++++.| ..+|+|+|
T Consensus 21 ~~~V~~~----~~~F~P~~i~V~~G~tV~~~N~d~~~H~v~~~~~--~~~~~~~~s~~l~~g~~~~~tf---~~~G~y~~ 91 (106)
T 1id2_A 21 AVVVGIE----KMKYLTPEVTIKAGETVYWVNGEVMPHNVAFKKG--IVGEDAFRGEMMTKDQAYAITF---NEAGSYDY 91 (106)
T ss_dssp CEEEEEE----TTEESSSEEEECTTCEEEEEECSSSCBCCEECTT--TSSSSCEECCCBCTTEEEEEEE---CSCEEEEE
T ss_pred cEEEEEE----ecEEeCCEEEECCCCEEEEEECCCCcEEEEEeCC--CCCcccccccccCCCCEEEEEe---CCCEEEEE
Confidence 4444443 34454469999999999 87765432 1122112223578999999888 46899999
Q ss_pred eecCC
Q 047904 107 HAHMT 111 (448)
Q Consensus 107 H~H~~ 111 (448)
+|-.|
T Consensus 92 ~C~~H 96 (106)
T 1id2_A 92 FCTPH 96 (106)
T ss_dssp ECSSC
T ss_pred EeCCC
Confidence 99654
No 94
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=96.64 E-value=0.0043 Score=52.77 Aligned_cols=27 Identities=15% Similarity=0.267 Sum_probs=24.2
Q ss_pred CCCCCCeeEEEEEeCCccceeEEeecCC
Q 047904 84 PIQTGQSCVYNFTIVGRRGKLWWHAHMT 111 (448)
Q Consensus 84 pI~PG~~ftY~f~~~~~~GT~wYH~H~~ 111 (448)
.|.||++.++.|++ ..+|+|||||+..
T Consensus 99 ~l~pG~~~~~~~~~-~~~G~y~f~C~~~ 125 (140)
T 1qhq_A 99 MLNAGESGSVTFRT-PAPGTYLYICTFP 125 (140)
T ss_dssp CBCTTEEEEEEEEC-CSSEEEEEECCST
T ss_pred eeCCCceeEEEEEe-CCCeeEEEEeCCc
Confidence 47999999999997 7899999999864
No 95
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=96.39 E-value=0.011 Score=62.58 Aligned_cols=74 Identities=9% Similarity=-0.038 Sum_probs=55.8
Q ss_pred eEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEecCceec---------------------------eeEeeeEEe
Q 047904 200 MILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVK---------------------------PFETETLLI 252 (448)
Q Consensus 200 ~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~DG~~v~---------------------------P~~~~~i~i 252 (448)
..+.++.|++++|.|+|.+. ..+.||||||.|+|++.+|.... +...|++.|
T Consensus 472 ~~~~~~~g~~~~w~i~N~~~-~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v 550 (612)
T 3gyr_A 472 LGFTIGEGTHEQWTFLNLSP-ILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQV 550 (612)
T ss_dssp CCEEEETTCEEEEEEEECSS-SCEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTCSSCBSEEEE
T ss_pred cceEeCCCCEEEEEEEcCCC-CCcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCcccccCCCCcEEEE
Confidence 56889999999999999984 57999999999999998765321 224689999
Q ss_pred cCCccccccc--CCcceEEEEEEe
Q 047904 253 APGQTTNGTF--DNSTVAGILEYE 274 (448)
Q Consensus 253 ~~GeRydv~~--~~~~~~aiL~Y~ 274 (448)
.+|+.+.+++ ....+.-++++.
T Consensus 551 ~~~~~v~i~~rfadnpG~w~~HCH 574 (612)
T 3gyr_A 551 PGPQGLRVMGKFDGAYGRFMYHCH 574 (612)
T ss_dssp CSSEEEEEEEECCSCCEEEEEEES
T ss_pred CCCCEEEEEEEeCCCCcceEEcCC
Confidence 9998887744 333344455554
No 96
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=94.10 E-value=0.078 Score=55.10 Aligned_cols=55 Identities=18% Similarity=0.378 Sum_probs=43.0
Q ss_pred CCcCCCceEEEecCCee--------------eecccCCCCCCCCCCccccCCCCCCCeeEEEEEeCCccceeEEeecC
Q 047904 47 NGKFPGPRIVAREGDQL--------------HGIRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVGRRGKLWWHAHM 110 (448)
Q Consensus 47 NG~~PGP~I~v~~Gd~v--------------HGl~~~~~~~~DGvp~vtq~pI~PG~~ftY~f~~~~~~GT~wYH~H~ 110 (448)
+-+|--+.|+|++||+| ||+.++.. ++ ..-+.||++.++.|++ .++|+|||||..
T Consensus 552 ~~~FsP~eI~VP~GdtVrfiLTN~D~veDViHSF~IPsl-------GI-K~DaiPGrtnsvtFta-dkPGvY~y~CSE 620 (638)
T 3sbq_A 552 APAFGVQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNH-------GV-SMEISPQQTSSITFVA-DKPGLHWYYCSW 620 (638)
T ss_dssp TTEESCCEEEEETTCEEEEEEEECCCSTTCCEEEEETTT-------TE-EEEECTTCEEEEEEEC-CSCEEEEEECCS
T ss_pred cccccCCEEEEecCceeEEEEecCCcCCCceeeeEecCC-------Cc-eeeeCCCCeEEEEEEc-CCCEEEEEECCC
Confidence 44565679999999999 77776542 22 2357899999999997 899999999974
No 97
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=93.73 E-value=0.081 Score=44.30 Aligned_cols=27 Identities=11% Similarity=0.215 Sum_probs=22.9
Q ss_pred CCCCCCeeEEEEEeC--CccceeEEeecC
Q 047904 84 PIQTGQSCVYNFTIV--GRRGKLWWHAHM 110 (448)
Q Consensus 84 pI~PG~~ftY~f~~~--~~~GT~wYH~H~ 110 (448)
-|.||++++..|+++ .++|+|||.|-.
T Consensus 86 ~l~pGet~svtf~~~~~~~~G~Y~f~C~~ 114 (129)
T 1cuo_A 86 IIGGGEKTSVKFKVSALSKDEAYTYFCSY 114 (129)
T ss_dssp CBCTTCEEEEEEEGGGCCTTSCEEEECCS
T ss_pred EECCCCEEEEEEeccccCCCceEEEEeCC
Confidence 479999999999973 289999999954
No 98
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=93.63 E-value=0.069 Score=45.08 Aligned_cols=57 Identities=25% Similarity=0.302 Sum_probs=39.9
Q ss_pred eEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEecC-----------------ceec----eeEeeeEEecCCccc
Q 047904 200 MILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADV-----------------VYVK----PFETETLLIAPGQTT 258 (448)
Q Consensus 200 ~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~DG-----------------~~v~----P~~~~~i~i~~GeRy 258 (448)
..|+|++|++++|++.|.+... .|.|.+...+. .++. ....++..|.|||++
T Consensus 35 ~~i~v~~G~~V~~~~~N~~~~~-------~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~ 107 (139)
T 2aan_A 35 TELTVSAGQTVTIRFKNNSAVQ-------QHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETV 107 (139)
T ss_dssp SEEEECTTCEEEEEEECCCSSC-------CBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEE
T ss_pred CeEEECCCCEEEEEEEeCCCCC-------CeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEE
Confidence 7899999999999999998532 45555543221 1221 234567789999999
Q ss_pred ccccC
Q 047904 259 NGTFD 263 (448)
Q Consensus 259 dv~~~ 263 (448)
++.|.
T Consensus 108 ~v~f~ 112 (139)
T 2aan_A 108 EVTFT 112 (139)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 98765
No 99
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=93.06 E-value=0.052 Score=43.12 Aligned_cols=71 Identities=20% Similarity=0.261 Sum_probs=45.1
Q ss_pred ceEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCcccccccCCcceEEEEEEe
Q 047904 199 DMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGTFDNSTVAGILEYE 274 (448)
Q Consensus 199 ~~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeRydv~~~~~~~~aiL~Y~ 274 (448)
.+.|+|++|++++| +|.+ ...+.|++++..+.. .+|..-.....+...|.|||+++++|......+...|.
T Consensus 18 p~~i~v~~Gd~V~~--~N~~-~~~H~v~~~~~~~~~--~~g~~~~~~~~~~~~i~pG~~~~~~f~~~~~~G~y~y~ 88 (105)
T 3cvb_A 18 PANVTVHPGDTVKW--VNNK-LPPHNILFDDKQVPG--ASKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYY 88 (105)
T ss_dssp SSEEEECTTEEEEE--EECS-SCCEEEEECTTSSGG--GCHHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEE
T ss_pred CCEEEEcCCCEEEE--EECC-CCCCeEEEeCCCCCc--ccccccccccccccccCCCCeEEEEEecCCCCeeEEEE
Confidence 37899999999865 6886 356889998865432 11211111224678899999999887532233445553
No 100
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=91.27 E-value=0.58 Score=37.54 Aligned_cols=58 Identities=26% Similarity=0.205 Sum_probs=40.7
Q ss_pred ceEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCcccccccCCcceEEEEEEe
Q 047904 199 DMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGTFDNSTVAGILEYE 274 (448)
Q Consensus 199 ~~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeRydv~~~~~~~~aiL~Y~ 274 (448)
++.++|++|+++||++.|.... .+.|.+.+. |. ...+.|||++++.|.. ...|...|.
T Consensus 37 p~~i~v~~G~~V~~~~~n~d~~-~H~~~i~~~--------~~--------~~~i~pG~~~~~~f~~-~~~G~y~~~ 94 (112)
T 1iby_A 37 PETLVVKKGDAVKVVVENKSPI-SEGFSIDAF--------GV--------QEVIKAGETKTISFTA-DKAGAFTIW 94 (112)
T ss_dssp SCEEEEETTCEEEEEEEECSSS-CEEEEEGGG--------TE--------EEEECTTCEEEEEEEC-CSCEEEEEB
T ss_pred CCEEEEeCCCEEEEEEEECCCC-eEEEEEcCC--------Cc--------eeEeCCCCEEEEEEEC-CCCEEEEEE
Confidence 3789999999999999999843 455655542 21 5679999999987742 123455554
No 101
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=88.39 E-value=0.22 Score=43.62 Aligned_cols=27 Identities=11% Similarity=0.127 Sum_probs=22.7
Q ss_pred CCCCCCeeEEEEEeC-CccceeEEeecC
Q 047904 84 PIQTGQSCVYNFTIV-GRRGKLWWHAHM 110 (448)
Q Consensus 84 pI~PG~~ftY~f~~~-~~~GT~wYH~H~ 110 (448)
-|.||+++++.|+++ -++|+|||+|-.
T Consensus 125 ~l~pGet~svtf~~~~lkpG~Y~f~Ct~ 152 (167)
T 3ay2_A 125 LIGGGEESSLTLDPAKLADGDYKFACTF 152 (167)
T ss_dssp CBCTTCEEEEEECGGGGTTSCEEEECCS
T ss_pred eeCCCCEEEEEEecCCCCCcEEEEEcCC
Confidence 479999999999873 179999999954
No 102
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=86.97 E-value=0.48 Score=39.82 Aligned_cols=47 Identities=19% Similarity=0.362 Sum_probs=37.1
Q ss_pred eEEEecCCee----------eecccCCCCCCCCCCccccCCCCCCCeeEEEEEeCCccceeEEeec
Q 047904 54 RIVAREGDQL----------HGIRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVGRRGKLWWHAH 109 (448)
Q Consensus 54 ~I~v~~Gd~v----------HGl~~~~~~~~DGvp~vtq~pI~PG~~ftY~f~~~~~~GT~wYH~H 109 (448)
.|++..|++| |++..+.. | + +.-+.||+.-++.|++ +++|+|+|+|.
T Consensus 61 ~l~Vp~G~~V~~~vts~DV~Hsf~ip~~----~---~-k~d~~PG~~~~~~~~~-~~~G~y~~~C~ 117 (135)
T 2cua_A 61 PIEVPQGAEIVFKITSPDVIHGFHVEGT----N---I-NVEVLPGEVSTVRYTF-KRPGEYRIICN 117 (135)
T ss_dssp SEEEETTSEEEEEEEBSSSCEEEEETTS----S---C-EEEECBTBCEEEEEEC-CSCEEEEEECC
T ss_pred EEEEcCCCEEEEEEEeCCccceEEecCC----C---c-eeEeCCCCcEEEEEEc-CCCEEEEEECc
Confidence 7999999999 98887642 1 1 1336789988999986 89999999994
No 103
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=86.05 E-value=1.1 Score=34.88 Aligned_cols=56 Identities=18% Similarity=0.224 Sum_probs=36.4
Q ss_pred eEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCcccccccC
Q 047904 200 MILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGTFD 263 (448)
Q Consensus 200 ~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeRydv~~~ 263 (448)
..++|++|++++|+ |.+. ..+.|.+++...- |..-.....+.+.+.+||++.++|.
T Consensus 19 ~~i~v~~G~~V~~~--n~~~-~~H~~~~~~~~~p-----g~~~~~~~~~~~~~~pG~~~~~tf~ 74 (98)
T 1pcs_A 19 STVTIKAGEEVKWV--NNKL-SPHNIVFDADGVP-----ADTAAKLSHKGLLFAAGESFTSTFT 74 (98)
T ss_dssp SEEEECTTCEEEEE--ECSS-CCEEEEECCSSSC-----HHHHHHHCEEEEECSTTCEEEEECC
T ss_pred CEEEECCCCEEEEE--ECCC-CCcEEEEeCCCCC-----ccccccccccccccCCCCEEEEEcC
Confidence 67999999999876 7653 4577777553211 1000111245788999999998874
No 104
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=85.50 E-value=1.6 Score=33.81 Aligned_cols=57 Identities=21% Similarity=0.241 Sum_probs=37.2
Q ss_pred eEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCcccccccC
Q 047904 200 MILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGTFD 263 (448)
Q Consensus 200 ~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeRydv~~~ 263 (448)
..++|++|++++| .|.+. ..+.|++++..+ -+|..-.....+.+.+.+||++.++|.
T Consensus 18 ~~i~v~~G~~V~~--~n~~~-~~H~~~~~~~~~----p~~~~~~~~~~~~~~~~pG~~~~~tf~ 74 (98)
T 2plt_A 18 KTLTIKSGETVNF--VNNAG-FPHNIVFDEDAI----PSGVNADAISRDDYLNAPGETYSVKLT 74 (98)
T ss_dssp SEEEECTTCEEEE--EECSS-CCEEEEECGGGS----CTTCCHHHHCEEEEECSTTCEEEEECC
T ss_pred CEEEECCCCEEEE--EECCC-CceEEEEeCCCC----CCccccccccccceecCCCCEEEEEeC
Confidence 6799999999876 68763 457777765321 011111111245688999999999876
No 105
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=84.23 E-value=3.3 Score=31.28 Aligned_cols=49 Identities=20% Similarity=0.346 Sum_probs=34.6
Q ss_pred eEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCcccccccC
Q 047904 200 MILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGTFD 263 (448)
Q Consensus 200 ~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeRydv~~~ 263 (448)
..+++++|++++|+ |.+. ..+.|.+++. .+...+...+.+|+++.+.|.
T Consensus 19 ~~i~v~~Gd~V~~~--n~~~-~~H~v~~~~~------------~~~~~~~~~~~~g~~~~~~f~ 67 (91)
T 1bxv_A 19 STIEIQAGDTVQWV--NNKL-APHNVVVEGQ------------PELSHKDLAFSPGETFEATFS 67 (91)
T ss_dssp SEEEECTTCEEEEE--ECSS-CCEEEEETTC------------GGGCEEEEECSTTCEEEEECC
T ss_pred CEEEECCCCEEEEE--ECCC-CCcEEEEeCC------------CccCcccceeCCCCEEEEEeC
Confidence 67999999999875 7653 4567766652 112245678999999998773
No 106
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=81.07 E-value=1.2 Score=37.01 Aligned_cols=26 Identities=15% Similarity=0.364 Sum_probs=22.0
Q ss_pred CCCCCCeeEEEEEeCC--ccce-eEEeecC
Q 047904 84 PIQTGQSCVYNFTIVG--RRGK-LWWHAHM 110 (448)
Q Consensus 84 pI~PG~~ftY~f~~~~--~~GT-~wYH~H~ 110 (448)
-|.||++++..|++ . .+|+ |+|.|-.
T Consensus 85 ~l~pGes~~vtf~~-~~l~~G~~Y~f~C~~ 113 (128)
T 2iaa_C 85 VIGGGETDSVTFDV-SKLKEGEDYAFFCSF 113 (128)
T ss_dssp CBCTTCEEEEEEES-SCCCTTCCEEEECCS
T ss_pred eeCCCCEEEEEEec-cccCCCceEEEEECC
Confidence 47999999999997 4 6885 9999954
No 107
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=80.78 E-value=1.1 Score=37.15 Aligned_cols=26 Identities=15% Similarity=0.308 Sum_probs=21.9
Q ss_pred CCCCCCeeEEEEEeCC--ccce-eEEeecC
Q 047904 84 PIQTGQSCVYNFTIVG--RRGK-LWWHAHM 110 (448)
Q Consensus 84 pI~PG~~ftY~f~~~~--~~GT-~wYH~H~ 110 (448)
-|.||++++..|++ . .+|+ |||.|-.
T Consensus 86 ~l~pGet~svtf~~-~~l~~G~~Y~f~C~~ 114 (128)
T 1nwp_A 86 VIGAGEKDSVTFDV-SKLAAGEKYGFFCSF 114 (128)
T ss_dssp CBCTTCEEEEEEEG-GGSCTTSCEEEECCS
T ss_pred eeCCCCEEEEEEec-cccCCCceEEEEECC
Confidence 47999999999997 4 5777 9999954
No 108
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=80.58 E-value=1.4 Score=38.49 Aligned_cols=64 Identities=16% Similarity=0.254 Sum_probs=45.5
Q ss_pred EEEEEEEEEEeeCCcCCCceEEEecCCee----------eecccCCCCCCCCCCccccCCCCCCCeeEEEEEeCCcccee
Q 047904 35 RHYEFDIKLQNLNGKFPGPRIVAREGDQL----------HGIRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVGRRGKL 104 (448)
Q Consensus 35 ~~~~l~i~~~~~NG~~PGP~I~v~~Gd~v----------HGl~~~~~~~~DGvp~vtq~pI~PG~~ftY~f~~~~~~GT~ 104 (448)
+.++..++... =+|--..|++..|++| |+...+.. ++ +.-+.||+..+..|++ +++|+|
T Consensus 77 ~~v~V~m~a~~--~~f~Pn~l~VP~G~~Vr~~vTS~DViHsf~IP~l-------gi-k~da~PG~~n~~~~~~-~kpG~y 145 (168)
T 3s8f_B 77 NQYTVYVLAFA--FGYQPNPIEVPQGAEIVFKITSPDVIHGFHVEGT-------NI-NVEVLPGEVSTVRYTF-KRPGEY 145 (168)
T ss_dssp TEEEEEEEEET--TEEESSSEEEETTSEEEEEEECSSSCEEEEETTS-------SC-EEEECTTBCEEEEEEC-CSCEEE
T ss_pred CeEEEEEEEEe--ceEecCEEEEeCCCeEEEEEecCCceEEEEECCC-------Ce-EEEecCCceeEEEEEe-CCCEEE
Confidence 46776666543 1121247888888888 99988763 22 2335799999999997 899999
Q ss_pred EEeec
Q 047904 105 WWHAH 109 (448)
Q Consensus 105 wYH~H 109 (448)
++.|.
T Consensus 146 ~g~Cs 150 (168)
T 3s8f_B 146 RIICN 150 (168)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 99996
No 109
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=80.00 E-value=1.1 Score=37.24 Aligned_cols=26 Identities=19% Similarity=0.324 Sum_probs=21.4
Q ss_pred CCCCCCeeEEEEEeCC--ccce-eEEeecC
Q 047904 84 PIQTGQSCVYNFTIVG--RRGK-LWWHAHM 110 (448)
Q Consensus 84 pI~PG~~ftY~f~~~~--~~GT-~wYH~H~ 110 (448)
-|.||++++..|++ . .+|+ |||.|-.
T Consensus 86 ~l~pGet~svtf~~-~~l~~G~~Y~f~C~~ 114 (129)
T 2ccw_A 86 VIGGGESDSVTFDV-SKIAAGENYAYFCSF 114 (129)
T ss_dssp CBCTTCEEEEEEEG-GGSCTTCCEEEECCS
T ss_pred EECCCCEEEEEEec-cccCCCceEEEEeCC
Confidence 47999999999997 4 5665 9999954
No 110
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=79.97 E-value=1.3 Score=34.68 Aligned_cols=54 Identities=9% Similarity=0.046 Sum_probs=33.5
Q ss_pred eEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEecCce-------ece-eEeeeEEecCCcccccccC
Q 047904 200 MILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVY-------VKP-FETETLLIAPGQTTNGTFD 263 (448)
Q Consensus 200 ~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~DG~~-------v~P-~~~~~i~i~~GeRydv~~~ 263 (448)
..|+|++|++++|+ |.+. .. |.+.+...|+.. ..| ...+.+.+.+||++.++|.
T Consensus 17 ~~i~v~~G~tV~~~--n~~~-~~-------H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf~ 78 (102)
T 1kdj_A 17 DSITVSAGEAVEFT--LVGE-TG-------HNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFKAKVS 78 (102)
T ss_dssp SEEEECTTCCEEEE--ECSS-SC-------BCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECCC
T ss_pred CEEEECCCCEEEEE--ECCC-CC-------eEEEEeCcccccccccchhhcccccccceecCCCCEEEEEeC
Confidence 68999999999875 7763 23 444333223321 011 1125677899999999884
No 111
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=78.33 E-value=4.4 Score=31.33 Aligned_cols=58 Identities=14% Similarity=0.088 Sum_probs=35.1
Q ss_pred ceEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCcccccccC
Q 047904 199 DMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGTFD 263 (448)
Q Consensus 199 ~~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeRydv~~~ 263 (448)
+..|+|++|++++|+ |.+. ..+.+.+....+ -+|........+...+.+||++.++|.
T Consensus 17 P~~i~v~~GdtV~~~--n~~~-~~H~v~~~~~~~----p~g~~~~~~~~~~~~~~~g~~~~~tf~ 74 (98)
T 1iuz_A 17 PSKISVAAGEAIEFV--NNAG-FPHNIVFDEDAV----PAGVDADAISYDDYLNSKGETVVRKLS 74 (98)
T ss_dssp SSEEEECTTCEEEEE--ECSS-CCEEEEECTTSS----CTTCCHHHHCEEEEECSTTCEEEEECC
T ss_pred CCEEEECCCCEEEEE--ECCC-CCEEEEEeCCCC----ccccccccccccccccCCCCEEEEEcC
Confidence 378999999998775 7763 455555543110 012111112234578999999998884
No 112
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=77.61 E-value=3.9 Score=31.84 Aligned_cols=46 Identities=17% Similarity=0.278 Sum_probs=33.0
Q ss_pred eEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCccccccc
Q 047904 200 MILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGTF 262 (448)
Q Consensus 200 ~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeRydv~~ 262 (448)
..|+|++|++++|++.|.+. ..+.|.+++.... ..+.||+..++.+
T Consensus 28 ~~i~v~~G~tV~~~~~n~d~-~~H~~~~~~~~~~----------------~~~~pg~~~~~~~ 73 (100)
T 4hci_A 28 NVITIPINESTTLLLKNKGK-SEHTFTIKKLGID----------------VVVESGKEKNITV 73 (100)
T ss_dssp SEEEECTTSCEEEEEEECSS-SCEEEEEGGGTEE----------------EEECTTCEEEEEE
T ss_pred CEEEECCCCEEEEEEEcCCC-ceEEEEEecCCcc----------------eeecCCcceeEEE
Confidence 68999999999999999884 3467776554332 3466777666543
No 113
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=77.36 E-value=3.6 Score=31.61 Aligned_cols=53 Identities=19% Similarity=0.200 Sum_probs=33.0
Q ss_pred eEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEecCcee--ceeEeeeEEecCCcccccccC
Q 047904 200 MILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYV--KPFETETLLIAPGQTTNGTFD 263 (448)
Q Consensus 200 ~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~DG~~v--~P~~~~~i~i~~GeRydv~~~ 263 (448)
..++|++|++++|+ |.+. . .|.+.+...+. +. .....+++.+.+||++++.|.
T Consensus 19 ~~i~v~~G~~V~~~--n~~~-~-------~H~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~tf~ 73 (97)
T 1b3i_A 19 KALSISAGDTVEFV--MNKV-G-------PHNVIFDKVPA-GESAPALSNTKLAIAPGSFYSVTLG 73 (97)
T ss_dssp SEEEECTTCEEEEE--ECSS-C-------CCCBEEEECCT-TSCHHHHCBCCCCCSCSCCEEEECC
T ss_pred CEEEECCCCEEEEE--ECCC-C-------CeEEEEeCCCC-ccccccccccceecCCCCEEEEEeC
Confidence 68999999998765 7652 2 35544433221 11 011135678899999998774
No 114
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=76.81 E-value=2.7 Score=34.79 Aligned_cols=29 Identities=14% Similarity=0.153 Sum_probs=22.6
Q ss_pred eEEEE-eCCcEEEEEEEeccCCC----eEEEEEc
Q 047904 200 MILKV-KPGKTYLLRIINAALND----ELFFSIA 228 (448)
Q Consensus 200 ~~i~v-~~G~~~RlRliNa~~~~----~~~~~id 228 (448)
..|+| ++|++++|++.|.+... .|.|.|.
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~ 51 (128)
T 1nwp_A 18 KDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVIS 51 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEE
T ss_pred CEEEEecCCCEEEEEEEECCCCcccCCCceEEEc
Confidence 68999 99999999999999542 3555553
No 115
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=73.64 E-value=3.7 Score=33.92 Aligned_cols=21 Identities=14% Similarity=0.169 Sum_probs=19.0
Q ss_pred eEEEE-eCCcEEEEEEEeccCC
Q 047904 200 MILKV-KPGKTYLLRIINAALN 220 (448)
Q Consensus 200 ~~i~v-~~G~~~RlRliNa~~~ 220 (448)
..|+| ++|++++|.+.|.+..
T Consensus 17 ~~i~V~k~G~~vtv~~~N~g~~ 38 (128)
T 2iaa_C 17 KSIVVDKTCKEFTINLKHTGKL 38 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSCS
T ss_pred CEEEEecCCcEEEEEEEECCCC
Confidence 68999 9999999999999954
No 116
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=71.68 E-value=4.1 Score=33.69 Aligned_cols=21 Identities=14% Similarity=0.170 Sum_probs=19.1
Q ss_pred eEEEE-eCCcEEEEEEEeccCC
Q 047904 200 MILKV-KPGKTYLLRIINAALN 220 (448)
Q Consensus 200 ~~i~v-~~G~~~RlRliNa~~~ 220 (448)
..|+| ++|++++|.+.|.+..
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~ 39 (129)
T 2ccw_A 18 KEIVVDKSCKQFTMHLKHVGKM 39 (129)
T ss_dssp SEEEECTTCSEEEEEEEECSCC
T ss_pred ceEEEecCCCEEEEEEEECCCc
Confidence 68999 9999999999999954
No 117
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=69.11 E-value=4.1 Score=31.80 Aligned_cols=29 Identities=10% Similarity=0.158 Sum_probs=22.9
Q ss_pred EEEeecCCEEEEEEeecCCCCCCCCCcccCCCce
Q 047904 402 LVVLTFNTNVELIMQDTSILGTESHPLHLHGFNF 435 (448)
Q Consensus 402 ~~~v~~g~~Vdivi~N~~~~~~~~HP~HLHGh~F 435 (448)
.+.++.|++|.|+ |.+ ...|.+|+|+..+
T Consensus 21 ~i~v~~Gd~V~~~--n~~---~~~H~~~~~~~~~ 49 (106)
T 2gim_A 21 KLTIKPGDTVEFL--NNK---VPPHNVVFDAALN 49 (106)
T ss_dssp EEEECTTCEEEEE--ECS---SSCCCBEECSSSS
T ss_pred EEEECCCCEEEEE--ECC---CCCceEEEeCCCC
Confidence 5788999999886 643 3689999998754
No 118
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=69.03 E-value=5.2 Score=31.42 Aligned_cols=52 Identities=19% Similarity=0.027 Sum_probs=33.4
Q ss_pred ceEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCcccccccC
Q 047904 199 DMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGTFD 263 (448)
Q Consensus 199 ~~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeRydv~~~ 263 (448)
++.|+|++|++++| +|... ..+.+++++.. ||.. . .++-.|.+|+++.+.|.
T Consensus 32 P~~i~v~~Gd~V~~--~N~d~-~~H~v~~~~~~------~g~~--~--~~~~~~~pG~~~~~tf~ 83 (105)
T 2ov0_A 32 TPELHVKVGDTVTW--INREA-MPHNVHFVAGV------LGEA--A--LKGPMMKKEQAYSLTFT 83 (105)
T ss_dssp SSEEEECTTCEEEE--EECSS-SCBCCEECTTT------SSSS--C--EECCCBCTTEEEEEEEC
T ss_pred CCEEEECCCCEEEE--EECCC-CCEEEEEcCCC------CCcc--c--ccccccCCCCEEEEEeC
Confidence 37899999999877 48874 44556654421 4431 1 22224789999988774
No 119
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=65.37 E-value=13 Score=38.84 Aligned_cols=59 Identities=22% Similarity=0.218 Sum_probs=41.8
Q ss_pred ceEEEEeCCcEEEEEEEeccC--CCeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCcccccccCCcceEEEEEEe
Q 047904 199 DMILKVKPGKTYLLRIINAAL--NDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGTFDNSTVAGILEYE 274 (448)
Q Consensus 199 ~~~i~v~~G~~~RlRliNa~~--~~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeRydv~~~~~~~~aiL~Y~ 274 (448)
.+.|+|++|++++|++.|... ...|.|++.++.+. ..+.||+..++.|.. ...|+..|.
T Consensus 512 pp~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~----------------~~i~PG~t~t~~Fta-~~pGtY~yh 572 (595)
T 1fwx_A 512 IESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA----------------MEIGPQMTSSVTFVA-ANPGVYWYY 572 (595)
T ss_dssp CSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------EEECTTCEEEEEEEC-CSCEEEEEE
T ss_pred CCEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc----------------eeeCCCCeEEEEEEC-CCCEEEEEE
Confidence 378999999999999999753 23678888776422 578889888876543 234455554
No 120
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=64.42 E-value=4.9 Score=33.32 Aligned_cols=30 Identities=23% Similarity=0.076 Sum_probs=23.9
Q ss_pred EEEeecCCEEEEEEeecCCCCCCCCCcccCC
Q 047904 402 LVVLTFNTNVELIMQDTSILGTESHPLHLHG 432 (448)
Q Consensus 402 ~~~v~~g~~Vdivi~N~~~~~~~~HP~HLHG 432 (448)
.+.++.|++|.|++.|... ....|.||++.
T Consensus 34 ~i~v~~G~tV~~~~~N~~~-~~~~H~~~~~~ 63 (140)
T 1qhq_A 34 SLSLPANTVVRLDFVNQNN-LGVQHNWVLVN 63 (140)
T ss_dssp EEEEETTCEEEEEEEECCS-SCCCBCCEEES
T ss_pred eEEECCCCEEEEEEECCCC-CCCceeEEEec
Confidence 5789999999999999311 14789999984
No 121
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=61.75 E-value=4.5 Score=33.35 Aligned_cols=26 Identities=12% Similarity=0.208 Sum_probs=20.5
Q ss_pred CCCCCCeeEEEEEeC--CccceeEEeec
Q 047904 84 PIQTGQSCVYNFTIV--GRRGKLWWHAH 109 (448)
Q Consensus 84 pI~PG~~ftY~f~~~--~~~GT~wYH~H 109 (448)
-|.||++++..|+.+ ..+|+|.|-|-
T Consensus 86 ~l~pGes~~vtf~~~~l~~~G~y~f~C~ 113 (125)
T 3fsa_A 86 LIGSGEKDSVTFDVSKLKEGEQYMFFCA 113 (125)
T ss_dssp CBCTTCEEEEEEEGGGC---CCEEEECS
T ss_pred eeCCCcEEEEEEeCcCcCCCccEEEEcC
Confidence 379999999999974 27999999996
No 122
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=56.87 E-value=10 Score=29.75 Aligned_cols=51 Identities=14% Similarity=0.089 Sum_probs=31.3
Q ss_pred eEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCcccccccC
Q 047904 200 MILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGTFD 263 (448)
Q Consensus 200 ~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeRydv~~~ 263 (448)
..++|++|++++|+ |.+. ..+.+.+..... |. . ..++-.|.+|+++.+.|.
T Consensus 34 ~~i~V~~G~tV~~~--N~d~-~~H~v~~~~~~~------~~--~--~~~s~~l~~g~~~~~tf~ 84 (106)
T 1id2_A 34 PEVTIKAGETVYWV--NGEV-MPHNVAFKKGIV------GE--D--AFRGEMMTKDQAYAITFN 84 (106)
T ss_dssp SEEEECTTCEEEEE--ECSS-SCBCCEECTTTS------SS--S--CEECCCBCTTEEEEEEEC
T ss_pred CEEEECCCCEEEEE--ECCC-CcEEEEEeCCCC------Cc--c--cccccccCCCCEEEEEeC
Confidence 78999999999776 7764 334444433210 10 1 123335789999888774
No 123
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=55.93 E-value=9.8 Score=32.32 Aligned_cols=29 Identities=24% Similarity=0.228 Sum_probs=22.5
Q ss_pred eEEEEeCCcEEEEEEEeccCCCeEEEEEc
Q 047904 200 MILKVKPGKTYLLRIINAALNDELFFSIA 228 (448)
Q Consensus 200 ~~i~v~~G~~~RlRliNa~~~~~~~~~id 228 (448)
+.|+|++|++++|++.|.+....|.|.+.
T Consensus 61 p~i~V~~GD~V~~~~tN~~~~~~H~~~i~ 89 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTNKGFGHSFDIT 89 (154)
T ss_dssp CEEEECTTCEEEEEEEECCTTCCCCCEEE
T ss_pred CEEEEeCCCEEEEEEEcCCCCeeeEEEEe
Confidence 78999999999999999853334555554
No 124
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=51.28 E-value=5.9 Score=32.46 Aligned_cols=51 Identities=12% Similarity=0.215 Sum_probs=31.7
Q ss_pred ceEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCcccccccCC
Q 047904 199 DMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGTFDN 264 (448)
Q Consensus 199 ~~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeRydv~~~~ 264 (448)
+..|+|++|++++|.+-|. +|.+... ++ ..|-....+.+.||+.++++|..
T Consensus 20 P~~i~V~~GdtV~f~~~~~-----------~H~v~~~--~~--~~P~g~~~f~~~pg~t~s~TF~~ 70 (123)
T 3erx_A 20 PAFVRAEPGDVINFVPTDK-----------SHNVEAI--KE--ILPEGVESFKSKINESYTLTVTE 70 (123)
T ss_dssp SSEEEECTTEEEEEEESST-----------TCCCEEC--TT--SSCTTCCCCBCCTTCCEEEEECS
T ss_pred CCEEEECCCCEEEEEECCC-----------CceEEEc--CC--cCCCCccceecCCCCEEEEEeCC
Confidence 3789999999998877663 2444322 11 11222234456789999988753
No 125
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=49.65 E-value=15 Score=30.16 Aligned_cols=52 Identities=13% Similarity=0.025 Sum_probs=32.1
Q ss_pred ceEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCcccccccC
Q 047904 199 DMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGTFD 263 (448)
Q Consensus 199 ~~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeRydv~~~ 263 (448)
+..++|++|++++|+ |... ..+.+.+.... +|. ...++-.+.+||+++++|.
T Consensus 59 P~~i~V~~GdtV~~~--N~d~-~~H~v~~~~~~------~g~----~~~~s~~l~pG~t~~~tF~ 110 (132)
T 3c75_A 59 TPEVTIKAGETVYWV--NGEV-MPHNVAFKKGI------VGE----DAFRGEMMTKDQAYAITFN 110 (132)
T ss_dssp SSEEEECTTCEEEEE--ECSS-SCBCCEECTTT------SSS----SCEECCCBCTTEEEEEEEC
T ss_pred CCEEEECCCCEEEEE--ECCC-CceEEEEeCCC------CCc----ccccccccCCCCEEEEEcC
Confidence 378999999999875 7763 33444443321 111 1123345789999988774
No 126
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=49.38 E-value=12 Score=30.81 Aligned_cols=21 Identities=5% Similarity=0.063 Sum_probs=19.1
Q ss_pred eEEEEeCC-cEEEEEEEeccCC
Q 047904 200 MILKVKPG-KTYLLRIINAALN 220 (448)
Q Consensus 200 ~~i~v~~G-~~~RlRliNa~~~ 220 (448)
..|+|++| ++++|.+.|.+..
T Consensus 18 ~~i~V~~G~~~vtv~~~N~g~~ 39 (129)
T 1cuo_A 18 RSISVPASCAEFTVNFEHKGHM 39 (129)
T ss_dssp SEEEEETTCSEEEEEEEECSSS
T ss_pred CeEEEcCCCeEEEEEEEECCCC
Confidence 68999999 9999999999853
No 127
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=44.09 E-value=16 Score=27.94 Aligned_cols=29 Identities=3% Similarity=0.030 Sum_probs=22.2
Q ss_pred EEEeecCCEEEEEEeecCCCCCCCCCcccCCCce
Q 047904 402 LVVLTFNTNVELIMQDTSILGTESHPLHLHGFNF 435 (448)
Q Consensus 402 ~~~v~~g~~Vdivi~N~~~~~~~~HP~HLHGh~F 435 (448)
.+.++.|++|.| .|.+ ...|.+|+|+..|
T Consensus 18 ~i~v~~G~tV~~--~n~~---~~~H~~~~~~~~~ 46 (99)
T 1byp_A 18 DLSIASGEKITF--KNNA---GFPHNDLFDKKEV 46 (99)
T ss_dssp EEEECTTEEEEE--EECS---SCCBCCEECTTSS
T ss_pred EEEECCCCEEEE--EECC---CCcceEEEeCCCC
Confidence 578899999887 5654 4689999998643
No 128
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=43.94 E-value=17 Score=29.79 Aligned_cols=64 Identities=22% Similarity=0.306 Sum_probs=39.0
Q ss_pred eEEEEeC-CcEEEEEEEeccCCC----eEEEEEcCC-eeEEEEe-------cCceece----eEeeeEEecCCccccccc
Q 047904 200 MILKVKP-GKTYLLRIINAALND----ELFFSIANH-TLKVVEA-------DVVYVKP----FETETLLIAPGQTTNGTF 262 (448)
Q Consensus 200 ~~i~v~~-G~~~RlRliNa~~~~----~~~~~idgh-~~~Vva~-------DG~~v~P----~~~~~i~i~~GeRydv~~ 262 (448)
..|+|++ |+++||.|.|.|... .|+|-|... .+.-++. |-.|+++ +...+-.|.|||++++.|
T Consensus 18 ~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~vtf 97 (125)
T 3fsa_A 18 NAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVTF 97 (125)
T ss_dssp SEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEEEEE
T ss_pred CEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEEEEE
Confidence 6899976 999999999999542 344444311 0100111 2344432 234556789999999866
Q ss_pred C
Q 047904 263 D 263 (448)
Q Consensus 263 ~ 263 (448)
.
T Consensus 98 ~ 98 (125)
T 3fsa_A 98 D 98 (125)
T ss_dssp E
T ss_pred e
Confidence 4
No 129
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=43.24 E-value=12 Score=32.32 Aligned_cols=21 Identities=14% Similarity=0.254 Sum_probs=19.0
Q ss_pred eEEEE-eCCcEEEEEEEeccCC
Q 047904 200 MILKV-KPGKTYLLRIINAALN 220 (448)
Q Consensus 200 ~~i~v-~~G~~~RlRliNa~~~ 220 (448)
..|+| ++|++++|+|.|.+..
T Consensus 58 ~~itV~kaG~~Vtv~~~N~g~~ 79 (167)
T 3ay2_A 58 KDIQVSKACKEFTITLKHTGTQ 79 (167)
T ss_dssp SEEEEETTCSSEEEEEEECSCS
T ss_pred ceEEEecCCCEEEEEEEECCCC
Confidence 68999 9999999999999853
No 130
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=40.42 E-value=33 Score=27.40 Aligned_cols=43 Identities=23% Similarity=0.342 Sum_probs=30.0
Q ss_pred cEEEEEEEeccC-CCeEEEEEcCC-eeEEEEecCceeceeEeeeEEecCCccccc
Q 047904 208 KTYLLRIINAAL-NDELFFSIANH-TLKVVEADVVYVKPFETETLLIAPGQTTNG 260 (448)
Q Consensus 208 ~~~RlRliNa~~-~~~~~~~idgh-~~~Vva~DG~~v~P~~~~~i~i~~GeRydv 260 (448)
-.|+|||+|.+. ...|.|+++|. .++++. +. .+.|.+||..++
T Consensus 33 N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~g-------~~---~i~v~~g~~~~~ 77 (118)
T 2r39_A 33 NTYTLKVINKTQQVQEYNLDVKGLNDVSWYG-------KQ---TIQVEPGEVLNL 77 (118)
T ss_dssp EEEEEEEEECSSSCEEEEEEEESCSSCEEES-------CC---EEEECTTCEEEE
T ss_pred EEEEEEEEECCCCCEEEEEEEeCCcccEEeC-------CC---cEEECCCCEEEE
Confidence 469999999995 34678888774 243332 11 389999998876
No 131
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=39.27 E-value=11 Score=30.90 Aligned_cols=51 Identities=16% Similarity=0.182 Sum_probs=30.9
Q ss_pred ceEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEEecCceeceeEeeeEEecCCcccccccCC
Q 047904 199 DMILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVEADVVYVKPFETETLLIAPGQTTNGTFDN 264 (448)
Q Consensus 199 ~~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva~DG~~v~P~~~~~i~i~~GeRydv~~~~ 264 (448)
+..|+|++|++++|.+-|. +|.+... |+. .|-....+.+.|||.++++|..
T Consensus 22 P~~i~V~~GDtVtf~n~~~-----------~H~v~~~--~~~--~P~g~~~f~s~pGet~s~TF~~ 72 (127)
T 3tu6_A 22 PAVIRAQPGDTVTFVAKDK-----------GHNSALM--KGG--APEGAETWKGKINEEITVTLSK 72 (127)
T ss_dssp SSEEEECTTCEEEEECSSS-----------SCCCEEC--TTC--SCTTCCCCBCCTTCCCEEECCS
T ss_pred CCEEEECCCCEEEEEECCC-----------CceEEEc--cCc--CCCCccceecCCCCEEEEEeCC
Confidence 3789999999988766552 2444322 221 1211223455799999988853
No 132
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=37.20 E-value=43 Score=27.18 Aligned_cols=73 Identities=11% Similarity=0.138 Sum_probs=43.8
Q ss_pred eceeEEEEEEEEEEeeCCcCCCceEEEecCCee-------eecccCCCCCCCCCCcccc----CCCCCCCeeEEEEEeCC
Q 047904 31 FGITRHYEFDIKLQNLNGKFPGPRIVAREGDQL-------HGIRRLRSGWADGPAYITQ----CPIQTGQSCVYNFTIVG 99 (448)
Q Consensus 31 ~~~~~~~~l~i~~~~~NG~~PGP~I~v~~Gd~v-------HGl~~~~~~~~DGvp~vtq----~pI~PG~~ftY~f~~~~ 99 (448)
.+....+.|+|+.. .-=.=+|+...|.+. .|-.+= -|.||-.. +| .-|+||++.+|++..++
T Consensus 16 ~g~~v~~~ltv~N~----s~~~v~l~f~Sgq~~Df~v~d~~G~~Vw--rwS~~~~F-tQa~~~~tl~pGE~~~f~~~w~~ 88 (120)
T 3isy_A 16 EPEQIKFNMSLKNQ----SERAIEFQFSTGQKFELVVYDSEHKERY--RYSKEKMF-TQAFQNLTLESGETYDFSDVWKE 88 (120)
T ss_dssp CSSCEEEEEEEEEC----SSSCEEEEESSSCCEEEEEECTTCCEEE--ETTTTCCC-CCCCEEEEECTTCEEEEEEEESS
T ss_pred CCCeEEEEEEEEcC----CCCcEEEEeCCCCEEEEEEECCCCCEEE--Eccccchh-hhhhceEEECCCCEEEEEEEeCC
Confidence 34456666666543 221225555555554 232221 15777654 44 34899999999999963
Q ss_pred --ccceeEEeecC
Q 047904 100 --RRGKLWWHAHM 110 (448)
Q Consensus 100 --~~GT~wYH~H~ 110 (448)
.+|+|..+.-.
T Consensus 89 ~~~pG~Ytl~a~l 101 (120)
T 3isy_A 89 VPEPGTYEVKVTF 101 (120)
T ss_dssp CCCSEEEEEEEEE
T ss_pred CCCCccEEEEEEE
Confidence 48999887643
No 133
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=37.13 E-value=23 Score=31.66 Aligned_cols=47 Identities=13% Similarity=0.004 Sum_probs=36.3
Q ss_pred eEEEecCCee----------eecccCCCCCCCCCCccccCCCCCCCeeEEEEEeCCccceeEEeec
Q 047904 54 RIVAREGDQL----------HGIRRLRSGWADGPAYITQCPIQTGQSCVYNFTIVGRRGKLWWHAH 109 (448)
Q Consensus 54 ~I~v~~Gd~v----------HGl~~~~~~~~DGvp~vtq~pI~PG~~ftY~f~~~~~~GT~wYH~H 109 (448)
.|++..|+.| ||..++.- + .+.-+.||..-...|.+ +++|+|+..|-
T Consensus 42 ~l~lP~g~~V~~~lTS~DViHSF~IP~l-------g-vK~daiPGr~n~l~~~~-~~pG~y~g~Cs 98 (205)
T 1cyx_A 42 EIAFPANTPVYFKVTSNSVMHSFFIPRL-------G-SQIYAMAGMQTRLHLIA-NEPGTYDGICA 98 (205)
T ss_dssp EEEEETTSCEEEEEEESSSCEEEEEGGG-------T-EEEEECTTCCEEEEECC-SSSEEEEEEEC
T ss_pred eEEEeCCCEEEEEEecCCceeeEEeccc-------C-cEEEecCCceEEEEEEe-CCCeEEEEEcc
Confidence 5777777777 99998752 2 23446789999999987 89999999985
No 134
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=35.26 E-value=14 Score=30.51 Aligned_cols=24 Identities=17% Similarity=0.166 Sum_probs=19.4
Q ss_pred eEEEEeCCcEEEEEEEeccCCCeE
Q 047904 200 MILKVKPGKTYLLRIINAALNDEL 223 (448)
Q Consensus 200 ~~i~v~~G~~~RlRliNa~~~~~~ 223 (448)
-.|+|+.||++||.+.|-+..+.|
T Consensus 71 k~InV~~GETVrF~v~nkt~~W~F 94 (131)
T 2wtp_A 71 RYVNVDSGETVAFRAGEKIVAWTF 94 (131)
T ss_dssp CEEEEETTCEEEEEETTEEEEEEE
T ss_pred eEEEecCCCEEEEEeCCcEEEEEE
Confidence 449999999999999998855443
No 135
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=32.72 E-value=90 Score=30.08 Aligned_cols=52 Identities=17% Similarity=0.227 Sum_probs=31.0
Q ss_pred ceEEEe-cCCee--eecccCCCCCCCCCCccccCCCCCCCeeEEEEEeC-----CccceeEEee
Q 047904 53 PRIVAR-EGDQL--HGIRRLRSGWADGPAYITQCPIQTGQSCVYNFTIV-----GRRGKLWWHA 108 (448)
Q Consensus 53 P~I~v~-~Gd~v--HGl~~~~~~~~DGvp~vtq~pI~PG~~ftY~f~~~-----~~~GT~wYH~ 108 (448)
..++|. .|..| -|++++...-.+. .-..|+||++.+.+|.+. ...|+|-++.
T Consensus 66 ~~~~V~~~G~~v~f~Gi~~~~~~~~~d----~f~~L~pG~Sve~~~dla~~ydLs~gG~y~v~~ 125 (343)
T 2x3c_A 66 PLFLVERDGQPVSYEGALIKRAAPTDK----DFQLLKAGQSLTVQAEVSGLYDMSAQGQYSIRY 125 (343)
T ss_dssp CCEEEEETTEECCBCSCCCCCCCCCGG----GEEEECTTCEEEEEEECTTTBTCCSCEEEEEEE
T ss_pred ceEEEEeCCcccceeeEEEeccCCChh----hcEEeCCCCeEEEEEehhhccccCCCceEEEEE
Confidence 345543 34555 7777654311111 113489999999999985 2457766654
No 136
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=28.82 E-value=45 Score=25.26 Aligned_cols=28 Identities=4% Similarity=0.070 Sum_probs=21.8
Q ss_pred EEEeecCCEEEEEEeecCCCCCCCCCcccCCCc
Q 047904 402 LVVLTFNTNVELIMQDTSILGTESHPLHLHGFN 434 (448)
Q Consensus 402 ~~~v~~g~~Vdivi~N~~~~~~~~HP~HLHGh~ 434 (448)
.+.++.|++|.| .|.+ ...|-++++...
T Consensus 18 ~i~v~~G~tV~~--~n~~---~~~H~v~~~~~~ 45 (99)
T 1plc_A 18 EFSISPGEKIVF--KNNA---GFPHNIVFDEDS 45 (99)
T ss_dssp EEEECTTCEEEE--EECS---SCCBCCEECTTS
T ss_pred EEEECCCCEEEE--EECC---CCceEEEEeCCC
Confidence 578999999987 5654 468999999754
No 137
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=27.34 E-value=36 Score=27.77 Aligned_cols=18 Identities=28% Similarity=0.551 Sum_probs=15.6
Q ss_pred ccCCCCCCCeeEEEEEeC
Q 047904 81 TQCPIQTGQSCVYNFTIV 98 (448)
Q Consensus 81 tq~pI~PG~~ftY~f~~~ 98 (448)
+.|||.+|+.++|.+..+
T Consensus 76 ~~CPl~~G~~~~y~~~~~ 93 (129)
T 1xwv_A 76 MKCPLVKGQQYDAKYTWN 93 (129)
T ss_dssp SCSSBCTTCEEEEEEEEE
T ss_pred ccCcccCCEEEEEEEEeE
Confidence 579999999999997763
No 138
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=26.57 E-value=1.2e+02 Score=24.81 Aligned_cols=32 Identities=13% Similarity=0.204 Sum_probs=24.8
Q ss_pred eEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeE
Q 047904 200 MILKVKPGKTYLLRIINAALNDELFFSIANHTLK 233 (448)
Q Consensus 200 ~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~ 233 (448)
..+.|+.|+++||++-|.. -.+.|.|.+..++
T Consensus 60 ~~l~Vp~G~~V~~~vts~D--V~Hsf~ip~~~~k 91 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSPD--VIHGFHVEGTNIN 91 (135)
T ss_dssp SSEEEETTSEEEEEEEBSS--SCEEEEETTSSCE
T ss_pred CEEEEcCCCEEEEEEEeCC--ccceEEecCCCce
Confidence 4689999999999988864 4677877765543
No 139
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=26.50 E-value=1.9e+02 Score=23.31 Aligned_cols=54 Identities=13% Similarity=0.162 Sum_probs=37.1
Q ss_pred CCcE--EEEEEEeccCCCeEEEEEc-CCe--eEEEEecCceec--------eeEeeeEEecCCccccc
Q 047904 206 PGKT--YLLRIINAALNDELFFSIA-NHT--LKVVEADVVYVK--------PFETETLLIAPGQTTNG 260 (448)
Q Consensus 206 ~G~~--~RlRliNa~~~~~~~~~id-gh~--~~Vva~DG~~v~--------P~~~~~i~i~~GeRydv 260 (448)
.|+. +.|.+.|.+. ....+.+. |+. |.|...+|..|- ........|.|||.+..
T Consensus 16 ~g~~v~~~ltv~N~s~-~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f 82 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSE-RAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDF 82 (120)
T ss_dssp CSSCEEEEEEEEECSS-SCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEE
T ss_pred CCCeEEEEEEEEcCCC-CcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEE
Confidence 4444 4477889994 55777774 554 555555687773 34567999999999886
No 140
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=26.07 E-value=36 Score=27.82 Aligned_cols=25 Identities=24% Similarity=0.432 Sum_probs=18.5
Q ss_pred CCCCCccccCCCCCCCeeEEEEEeC
Q 047904 74 ADGPAYITQCPIQTGQSCVYNFTIV 98 (448)
Q Consensus 74 ~DGvp~vtq~pI~PG~~ftY~f~~~ 98 (448)
.|+=..-+.|||.+|+.++|.+.++
T Consensus 71 ~daC~~g~~CPl~~G~~~~y~~~lp 95 (130)
T 1nep_A 71 SDGCKSGIRCPIEKDKTYNYVNKLP 95 (130)
T ss_dssp CBGGGTTCCSSBCTTCEEEEEEEEE
T ss_pred CCcccCCCcCcccCCcEEEEEEEeE
Confidence 3444222479999999999998874
No 141
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=20.90 E-value=1.3e+02 Score=25.70 Aligned_cols=35 Identities=14% Similarity=0.207 Sum_probs=27.6
Q ss_pred eEEEEeCCcEEEEEEEeccCCCeEEEEEcCCeeEEEE
Q 047904 200 MILKVKPGKTYLLRIINAALNDELFFSIANHTLKVVE 236 (448)
Q Consensus 200 ~~i~v~~G~~~RlRliNa~~~~~~~~~idgh~~~Vva 236 (448)
..+.++.|+.+||++-|. .-.+.|.|.+..+++-+
T Consensus 93 n~l~VP~G~~Vr~~vTS~--DViHsf~IP~lgik~da 127 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSP--DVIHGFHVEGTNINVEV 127 (168)
T ss_dssp SSEEEETTSEEEEEEECS--SSCEEEEETTSSCEEEE
T ss_pred CEEEEeCCCeEEEEEecC--CceEEEEECCCCeEEEe
Confidence 458999999999999986 56788898877655433
Done!