Query 047906
Match_columns 119
No_of_seqs 105 out of 1433
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 04:27:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047906.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047906hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd03201 GST_C_DHAR GST_C famil 99.8 1E-18 2.2E-23 112.3 10.0 103 1-106 14-119 (121)
2 cd03184 GST_C_Omega GST_C fami 99.8 2.8E-18 6.1E-23 110.2 8.7 105 1-107 16-123 (124)
3 cd03185 GST_C_Tau GST_C family 99.8 1.3E-17 2.7E-22 106.8 11.3 104 4-107 21-125 (126)
4 cd03198 GST_C_CLIC GST_C famil 99.7 3.7E-17 7.9E-22 106.6 10.3 104 1-106 11-133 (134)
5 cd03190 GST_C_ECM4_like GST_C 99.7 4.5E-17 9.7E-22 107.1 9.4 109 2-110 20-131 (142)
6 KOG0406 Glutathione S-transfer 99.7 2.2E-16 4.8E-21 110.6 12.0 102 12-113 123-227 (231)
7 cd03186 GST_C_SspA GST_N famil 99.7 1.3E-15 2.9E-20 95.1 9.2 85 5-94 22-106 (107)
8 TIGR00862 O-ClC intracellular 99.6 5.1E-15 1.1E-19 104.9 11.5 105 2-108 106-231 (236)
9 cd03203 GST_C_Lambda GST_C fam 99.6 4.9E-15 1.1E-19 94.9 8.6 82 21-105 33-119 (120)
10 PF00043 GST_C: Glutathione S- 99.6 5.9E-15 1.3E-19 90.1 8.3 71 15-89 25-95 (95)
11 cd03196 GST_C_5 GST_C family, 99.6 2E-14 4.3E-19 91.4 8.5 77 15-94 38-114 (115)
12 cd03188 GST_C_Beta GST_C famil 99.6 2.4E-14 5.2E-19 89.8 7.8 74 16-95 41-114 (114)
13 cd03207 GST_C_8 GST_C family, 99.6 3.6E-14 7.7E-19 88.0 8.4 76 14-96 26-101 (103)
14 cd03187 GST_C_Phi GST_C family 99.5 3.3E-14 7.1E-19 89.8 8.1 78 13-94 40-117 (118)
15 cd03209 GST_C_Mu GST_C family, 99.5 5.1E-14 1.1E-18 90.0 8.4 77 16-97 33-109 (121)
16 cd03210 GST_C_Pi GST_C family, 99.5 7.4E-14 1.6E-18 89.9 7.7 78 15-97 32-112 (126)
17 cd03182 GST_C_GTT2_like GST_C 99.5 1.1E-13 2.3E-18 87.5 8.1 73 14-91 45-117 (117)
18 cd03178 GST_C_Ure2p_like GST_C 99.5 6.1E-14 1.3E-18 88.1 6.8 78 13-95 35-112 (113)
19 cd03191 GST_C_Zeta GST_C famil 99.5 1.8E-13 3.9E-18 87.1 9.0 73 19-97 45-119 (121)
20 cd03204 GST_C_GDAP1 GST_C fami 99.5 2E-13 4.4E-18 86.4 8.2 76 13-91 24-111 (111)
21 cd03177 GST_C_Delta_Epsilon GS 99.5 1.4E-13 2.9E-18 87.5 7.5 77 15-96 35-111 (118)
22 cd03208 GST_C_Alpha GST_C fami 99.5 1.9E-13 4.2E-18 89.4 7.9 70 22-96 43-114 (137)
23 cd03206 GST_C_7 GST_C family, 99.5 4E-13 8.6E-18 83.1 8.7 73 13-91 28-100 (100)
24 PRK09481 sspA stringent starva 99.5 4.5E-13 9.7E-18 93.1 9.9 84 13-100 122-205 (211)
25 cd03183 GST_C_Theta GST_C fami 99.5 3.7E-13 8.1E-18 86.2 8.7 78 13-95 40-120 (126)
26 PLN02817 glutathione dehydroge 99.5 7.1E-13 1.5E-17 95.4 10.2 86 20-107 173-261 (265)
27 cd03180 GST_C_2 GST_C family, 99.4 8.7E-13 1.9E-17 82.2 8.7 69 16-91 41-110 (110)
28 PF13410 GST_C_2: Glutathione 99.4 5.1E-13 1.1E-17 77.2 6.9 68 14-84 2-69 (69)
29 cd03181 GST_C_EFB1gamma GST_C 99.4 4.9E-13 1.1E-17 85.1 7.4 81 14-97 36-116 (123)
30 cd03189 GST_C_GTT1_like GST_C 99.4 8.1E-13 1.7E-17 83.7 8.1 66 18-89 54-119 (119)
31 PLN02378 glutathione S-transfe 99.4 1.7E-12 3.7E-17 90.4 9.4 84 18-103 118-205 (213)
32 PLN02473 glutathione S-transfe 99.4 1E-12 2.2E-17 91.1 7.2 77 17-96 134-210 (214)
33 PRK10542 glutathionine S-trans 99.4 1.5E-12 3.3E-17 89.4 7.6 73 18-96 124-196 (201)
34 TIGR01262 maiA maleylacetoacet 99.4 3E-12 6.4E-17 88.4 8.8 73 19-97 130-204 (210)
35 PRK13972 GSH-dependent disulfi 99.4 1.8E-12 3.9E-17 90.1 7.4 74 16-96 130-204 (215)
36 PRK11752 putative S-transferas 99.4 3.5E-12 7.6E-17 91.7 7.8 81 17-97 177-258 (264)
37 PRK10357 putative glutathione 99.3 6.9E-12 1.5E-16 86.3 8.9 77 17-97 124-200 (202)
38 PTZ00057 glutathione s-transfe 99.3 4.6E-12 9.9E-17 87.7 7.0 73 19-96 124-198 (205)
39 PLN02395 glutathione S-transfe 99.3 8.3E-12 1.8E-16 86.6 7.9 78 16-96 132-209 (215)
40 cd03195 GST_C_4 GST_C family, 99.3 9.1E-12 2E-16 79.0 7.3 70 17-95 41-111 (114)
41 cd03194 GST_C_3 GST_C family, 99.3 1.3E-11 2.8E-16 78.4 7.7 67 20-95 43-112 (114)
42 cd03202 GST_C_etherase_LigE GS 99.3 1.5E-11 3.2E-16 79.2 7.5 67 17-87 57-123 (124)
43 cd03179 GST_C_1 GST_C family, 99.3 2E-11 4.2E-16 75.5 7.5 68 13-86 38-105 (105)
44 cd00299 GST_C_family Glutathio 99.2 7.3E-11 1.6E-15 71.7 7.9 70 13-85 31-100 (100)
45 cd03193 GST_C_Metaxin GST_C fa 99.2 5.8E-11 1.3E-15 71.7 6.8 70 16-86 17-88 (88)
46 cd03192 GST_C_Sigma_like GST_C 99.2 1E-10 2.2E-15 72.4 6.8 68 14-85 35-104 (104)
47 COG0625 Gst Glutathione S-tran 99.2 1.7E-10 3.7E-15 79.9 8.0 73 14-92 127-199 (211)
48 PRK10387 glutaredoxin 2; Provi 99.1 9E-11 1.9E-15 81.0 5.7 67 18-92 142-208 (210)
49 cd03200 GST_C_JTV1 GST_C famil 99.1 2.5E-10 5.3E-15 70.5 6.8 58 21-87 38-95 (96)
50 PF14497 GST_C_3: Glutathione 99.1 2.3E-10 5E-15 70.6 5.5 66 15-87 32-99 (99)
51 PRK15113 glutathione S-transfe 99.1 4.7E-10 1E-14 78.1 7.0 73 17-98 136-209 (214)
52 cd03205 GST_C_6 GST_C family, 99.0 1.2E-09 2.6E-14 67.2 7.2 67 13-85 32-98 (98)
53 KOG1422 Intracellular Cl- chan 99.0 2.3E-09 5E-14 73.9 7.1 105 2-108 106-216 (221)
54 KOG4420 Uncharacterized conser 99.0 8.8E-09 1.9E-13 73.3 9.7 85 13-100 200-290 (325)
55 COG0435 ECM4 Predicted glutath 98.9 7.2E-10 1.6E-14 79.3 2.4 98 6-106 192-295 (324)
56 TIGR02182 GRXB Glutaredoxin, G 98.9 1.9E-09 4.1E-14 74.9 4.1 66 18-92 141-207 (209)
57 cd03211 GST_C_Metaxin2 GST_C f 98.9 8.2E-09 1.8E-13 66.6 6.3 68 17-85 56-125 (126)
58 KOG0867 Glutathione S-transfer 98.9 1.3E-08 2.9E-13 71.7 7.6 79 13-96 128-208 (226)
59 cd03197 GST_C_mPGES2 GST_C fam 98.9 1.3E-08 2.7E-13 67.4 7.0 64 19-87 80-145 (149)
60 cd03212 GST_C_Metaxin1_3 GST_C 98.8 2.5E-08 5.4E-13 65.3 7.5 70 16-87 62-134 (137)
61 KOG2903 Predicted glutathione 98.7 3.9E-09 8.3E-14 75.1 1.8 100 6-106 190-297 (319)
62 KOG0868 Glutathione S-transfer 98.7 3.7E-08 8.1E-13 66.7 6.1 71 21-97 135-207 (217)
63 PLN02907 glutamate-tRNA ligase 98.6 1.2E-07 2.6E-12 76.6 6.8 66 22-90 94-159 (722)
64 KOG1695 Glutathione S-transfer 98.6 1.4E-07 3E-12 65.7 6.2 70 22-96 127-199 (206)
65 KOG4244 Failed axon connection 97.4 0.00012 2.5E-09 52.6 2.4 66 19-87 204-272 (281)
66 PF04399 Glutaredoxin2_C: Glut 97.2 0.00073 1.6E-08 44.0 4.5 67 18-92 59-125 (132)
67 KOG3027 Mitochondrial outer me 97.2 0.00046 1E-08 48.1 3.7 74 13-87 172-247 (257)
68 PF14834 GST_C_4: Glutathione 96.9 0.0057 1.2E-07 38.8 6.3 69 18-95 43-112 (117)
69 KOG3029 Glutathione S-transfer 96.9 0.0044 9.6E-08 45.2 6.4 65 19-87 289-354 (370)
70 cd03199 GST_C_GRX2 GST_C famil 96.8 0.0055 1.2E-07 39.7 6.1 65 19-91 61-125 (128)
71 KOG3028 Translocase of outer m 95.5 0.1 2.2E-06 38.5 7.3 68 17-87 162-233 (313)
72 PF11801 Tom37_C: Tom37 C-term 89.3 1.8 3.9E-05 29.3 5.9 31 23-53 113-147 (168)
73 COG2999 GrxB Glutaredoxin 2 [P 84.6 2.1 4.6E-05 29.6 4.1 64 20-92 144-208 (215)
74 KOG1147 Glutamyl-tRNA syntheta 83.2 1.1 2.4E-05 35.9 2.6 59 21-83 91-150 (712)
75 KOG1668 Elongation factor 1 be 58.2 9.2 0.0002 27.3 2.2 59 24-92 10-68 (231)
76 PF08020 DUF1706: Protein of u 40.9 1E+02 0.0022 20.8 5.1 46 16-62 7-60 (166)
77 PF10414 CysG_dimeriser: Siroh 28.1 1.1E+02 0.0023 16.6 3.4 22 88-109 14-35 (60)
78 PRK08507 prephenate dehydrogen 25.9 1.5E+02 0.0032 21.2 4.2 34 3-36 221-255 (275)
79 PRK15371 effector protein YopJ 25.5 2.9E+02 0.0062 20.6 6.2 35 19-54 24-58 (287)
80 PF07181 VirC2: VirC2 protein; 25.1 1.7E+02 0.0036 20.3 4.0 41 2-42 95-135 (202)
81 PF03791 KNOX2: KNOX2 domain ; 24.9 1.3E+02 0.0028 16.3 3.7 32 4-35 17-48 (52)
82 PF10759 DUF2587: Protein of u 24.5 2.3E+02 0.0049 19.1 5.6 28 37-64 87-116 (169)
83 cd08200 catalase_peroxidase_2 24.1 1.8E+02 0.0039 21.8 4.3 41 22-65 73-115 (297)
84 COG3189 Uncharacterized conser 23.6 1.7E+02 0.0037 18.7 3.6 40 77-116 37-77 (117)
85 PF02153 PDH: Prephenate dehyd 23.3 1.9E+02 0.0042 20.5 4.4 33 3-35 212-245 (258)
86 KOG4095 Uncharacterized conser 23.2 1.1E+02 0.0024 20.5 2.8 28 13-40 8-36 (165)
87 COG3253 ywfI Predicted heme pe 22.1 1.8E+02 0.0039 20.9 3.9 32 20-51 192-226 (230)
88 PRK07417 arogenate dehydrogena 21.6 2E+02 0.0044 20.6 4.2 34 3-36 223-257 (279)
89 PF00392 GntR: Bacterial regul 21.4 1.1E+02 0.0024 16.6 2.3 25 27-51 6-31 (64)
No 1
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.79 E-value=1e-18 Score=112.26 Aligned_cols=103 Identities=18% Similarity=0.287 Sum_probs=81.8
Q ss_pred CcchhhHHHhhchHHHHHHHHHHHHHHHHHHHHhcC-CceecCCCCChhHHHHHHHHHHHHHH-HHh-CccccCCCcCcc
Q 047906 1 VFPSIWGVFIKQGKEQEEAFAQVFENFSFLEEELKG-KKFFGGEKIGYADLALGWIAERVFEL-EEI-GVKVIEKEKFPL 77 (119)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~-~~fl~G~~~t~aDi~l~~~~~~~~~~-~~~-~~~~~~~~~~p~ 77 (119)
|||++++++.+.+.. ++..+++.+.|..||..|++ ++||+||++|+||+++++++.++... ..+ ++.. .+.+|+
T Consensus 14 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~Le~~L~~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~--~~~~P~ 90 (121)
T cd03201 14 IFSTFVGFLKSKDSN-DGTEQALLDELEALEDHLKENGPFINGEKISAVDLSLAPKLYHLEIALGHYKNWSV--PESLTS 90 (121)
T ss_pred HHHHHHHHHHCCcHH-HHHHHHHHHHHHHHHHHHhcCCCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCCCC--cccchH
Confidence 578999999886555 55677899999999999974 79999999999999988754444322 111 3321 478999
Q ss_pred HHHHHHHHhcchhhhhcCCCHHHHHHHHH
Q 047906 78 VSAWMQEFLKVPVIKESLPPHEKLVTKMR 106 (119)
Q Consensus 78 l~~w~~~~~~~p~v~~~~~~~~~~~~~~~ 106 (119)
|.+|.++|.+||+|+++++..+++.+.|.
T Consensus 91 l~~w~~rl~~rps~~~t~~~~~~~~~~~~ 119 (121)
T cd03201 91 VKSYMKALFSRESFVKTKAEKEDVIAGWA 119 (121)
T ss_pred HHHHHHHHHCCchhhhcCCCHHHHHHHhc
Confidence 99999999999999999998888776654
No 2
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.77 E-value=2.8e-18 Score=110.21 Aligned_cols=105 Identities=24% Similarity=0.387 Sum_probs=84.3
Q ss_pred CcchhhHHHhhchHHHHHHHHHHHHHHHHHHHHhcC--CceecCCCCChhHHHHHHHHHHHHHHHHh-CccccCCCcCcc
Q 047906 1 VFPSIWGVFIKQGKEQEEAFAQVFENFSFLEEELKG--KKFFGGEKIGYADLALGWIAERVFELEEI-GVKVIEKEKFPL 77 (119)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~fl~G~~~t~aDi~l~~~~~~~~~~~~~-~~~~~~~~~~p~ 77 (119)
+++.+++.+.+ ++..++..+++.+.|+.+|+.|++ ++|++|+++|+||+++++.+.++..+... |. .++.+.+|+
T Consensus 16 ~~~~~~~~~~~-~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~t~aDi~~~~~~~~~~~~~~~~~~-~~~~~~~p~ 93 (124)
T cd03184 16 VVSAFYKLLGA-PSDREEKKAELRSALENLEEELTKRGTPFFGGDSPGMVDYMIWPWFERLEALKLLLGY-EFPLDRFPK 93 (124)
T ss_pred hhHHHHHHHhc-cccchhhHHHHHHHHHHHHHHHHhcCCCCcCCCCccHHHHHhhHHHHHHHHHHhhccc-cCCcccChH
Confidence 46778888877 566677888999999999999974 79999999999999977755555433211 11 123578999
Q ss_pred HHHHHHHHhcchhhhhcCCCHHHHHHHHHH
Q 047906 78 VSAWMQEFLKVPVIKESLPPHEKLVTKMRG 107 (119)
Q Consensus 78 l~~w~~~~~~~p~v~~~~~~~~~~~~~~~~ 107 (119)
|.+|+++|.++|+++.+.++.+++.++++.
T Consensus 94 l~~w~~r~~~~p~v~~~~~~~~~~~~~~~~ 123 (124)
T cd03184 94 LKKWMDAMKEDPAVQAFYTDTEIHAEFLKS 123 (124)
T ss_pred HHHHHHHhccChHHHHHhCCHHHHHHHHhc
Confidence 999999999999999999999999998874
No 3
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.76 E-value=1.3e-17 Score=106.84 Aligned_cols=104 Identities=42% Similarity=0.731 Sum_probs=81.0
Q ss_pred hhhHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHh-CccccCCCcCccHHHHH
Q 047906 4 SIWGVFIKQGKEQEEAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEI-GVKVIEKEKFPLVSAWM 82 (119)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~-~~~~~~~~~~p~l~~w~ 82 (119)
+++.++...++..+....++.+.+..||+.|++++|++|+++|+|||++++++.|+..+... +.+.++.+.+|++.+|+
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~ADi~l~~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~ 100 (126)
T cd03185 21 AGRKVLAAKGEEREKAKEEALEALKVLEEELGGKPFFGGDTIGYVDIALGSFLGWFRAYEEVGGVKLLDEEKTPLLAAWA 100 (126)
T ss_pred HHHHHHccchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHcCccccCcccCchHHHHH
Confidence 33444444444555677889999999999998789999999999999999888887654333 33322347799999999
Q ss_pred HHHhcchhhhhcCCCHHHHHHHHHH
Q 047906 83 QEFLKVPVIKESLPPHEKLVTKMRG 107 (119)
Q Consensus 83 ~~~~~~p~v~~~~~~~~~~~~~~~~ 107 (119)
++|.++|+++++.+..+...+++++
T Consensus 101 ~~~~~~p~~~~~~~~~~~~~~~~~~ 125 (126)
T cd03185 101 ERFLELEAVKEVLPDRDKLVEFAKA 125 (126)
T ss_pred HHHHhccHHHHhCCCHHHHHHHHHh
Confidence 9999999999999998888876653
No 4
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.74 E-value=3.7e-17 Score=106.62 Aligned_cols=104 Identities=12% Similarity=0.184 Sum_probs=80.4
Q ss_pred CcchhhHHHhhc-hHHHHHHHHHHHHHHHHHHHHhcC----------------CceecCCCCChhHHHHHHHHHHHHHHH
Q 047906 1 VFPSIWGVFIKQ-GKEQEEAFAQVFENFSFLEEELKG----------------KKFFGGEKIGYADLALGWIAERVFELE 63 (119)
Q Consensus 1 ~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~le~~L~~----------------~~fl~G~~~t~aDi~l~~~~~~~~~~~ 63 (119)
|||++-+.+.++ ++..+...+.+.+.|..||..|++ ++|++|+++|+|||++++.+.++....
T Consensus 11 ~f~~~~~~~~~~~~~~~e~~~~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~~~~~ 90 (134)
T cd03198 11 IFAKFSAYIKNSNPALNENLEKGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIVKVVA 90 (134)
T ss_pred HHHHHHHHHcCCChhhhHHHHHHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 477777877764 444556678899999999999975 679999999999999887555554321
Q ss_pred -H-hCccccCCCcCccHHHHHHHHhcchhhhhcCCCHHHHHHHHH
Q 047906 64 -E-IGVKVIEKEKFPLVSAWMQEFLKVPVIKESLPPHEKLVTKMR 106 (119)
Q Consensus 64 -~-~~~~~~~~~~~p~l~~w~~~~~~~p~v~~~~~~~~~~~~~~~ 106 (119)
. .+..+ .+.+|+|.+|+++|.+||+|+.++|..+.+...|+
T Consensus 91 ~~~~g~~i--~~~~P~L~aw~~ri~aRPsfk~t~~~~~~i~~~~~ 133 (134)
T cd03198 91 KKYRNFEI--PADLTGLWRYLKNAYQREEFTNTCPADQEIELAYK 133 (134)
T ss_pred HhhcCCCc--cccCHHHHHHHHHHHCCHHHHHHcCCHHHHHHHhc
Confidence 1 13332 47899999999999999999999998777776553
No 5
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.72 E-value=4.5e-17 Score=107.14 Aligned_cols=109 Identities=15% Similarity=0.187 Sum_probs=82.2
Q ss_pred cchhhHHHhh-chHHHHHHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHH-H-hCccccCCCcCccH
Q 047906 2 FPSIWGVFIK-QGKEQEEAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELE-E-IGVKVIEKEKFPLV 78 (119)
Q Consensus 2 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~-~-~~~~~~~~~~~p~l 78 (119)
.+.+++++.. +++..+....++.+.|+.||+.|++++|++|+++|+|||++++.+.++..+. . .+......+.||+|
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~LE~~L~~~~yl~Gd~~TlADi~l~~~l~~~~~~~~~~~~~~~~~~~~~P~L 99 (142)
T cd03190 20 NNGVYKAGFATTQEAYDEAVDELFEALDRLEELLSDRRYLLGDRLTEADIRLFTTLIRFDAVYVQHFKCNLKRIRDYPNL 99 (142)
T ss_pred hhHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHccCCeeeCCCccHHHHHHHHHHHHHHHHhhhhcccccchhhhCchH
Confidence 4556776554 4566667788899999999999987899999999999999776544332211 1 11110113689999
Q ss_pred HHHHHHHhcchhhhhcCCCHHHHHHHHHHHHH
Q 047906 79 SAWMQEFLKVPVIKESLPPHEKLVTKMRGIRE 110 (119)
Q Consensus 79 ~~w~~~~~~~p~v~~~~~~~~~~~~~~~~~~~ 110 (119)
.+|+++|.++|+++++++..+.+.+|+++.+.
T Consensus 100 ~~w~~r~~~~P~~k~~~~~~~~~~~~~~~~~~ 131 (142)
T cd03190 100 WNYLRRLYQNPGVAETTNFDHIKQHYYGSHFP 131 (142)
T ss_pred HHHHHHHhcCchHhhhcCHHHHHHHHHhhcCC
Confidence 99999999999999999887888899988754
No 6
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.71 E-value=2.2e-16 Score=110.57 Aligned_cols=102 Identities=39% Similarity=0.616 Sum_probs=87.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhc-CCceecCCCCChhHHHHHH-HHHHHHHHHHh-CccccCCCcCccHHHHHHHHhcc
Q 047906 12 QGKEQEEAFAQVFENFSFLEEELK-GKKFFGGEKIGYADLALGW-IAERVFELEEI-GVKVIEKEKFPLVSAWMQEFLKV 88 (119)
Q Consensus 12 ~~~~~~~~~~~~~~~l~~le~~L~-~~~fl~G~~~t~aDi~l~~-~~~~~~~~~~~-~~~~~~~~~~p~l~~w~~~~~~~ 88 (119)
+++.++...+++.+.|..||+.|. +++||+|+++|++||++++ +.+|......+ +.++++.+.+|+|.+|.++|.++
T Consensus 123 ~~e~~~~~~~e~~e~l~~lE~el~k~k~~fgG~~~G~vDi~~~p~~~~~~~~~~~~~~~~~~~~~~~P~L~~W~~~~~~~ 202 (231)
T KOG0406|consen 123 GGEEQEAAKEELREALKVLEEELGKGKDFFGGETIGFVDIAIGPSFERWLAVLEKFGGVKFIIEEETPKLIKWIKRMKED 202 (231)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCHhhhhHHhhHHHHHHHHHHhcCcccCCCCCCccHHHHHHHHhcC
Confidence 457777888999999999999997 6899999999999999874 66666655554 45556678999999999999999
Q ss_pred hhhhhcCCCHHHHHHHHHHHHHHhh
Q 047906 89 PVIKESLPPHEKLVTKMRGIREKYL 113 (119)
Q Consensus 89 p~v~~~~~~~~~~~~~~~~~~~~~~ 113 (119)
|+|+.++|+.+++.+|++.+++...
T Consensus 203 ~~V~~~~p~~e~~~e~~~~~~~~~~ 227 (231)
T KOG0406|consen 203 EAVKAVLPDSEKVVEFMKKYRQGSP 227 (231)
T ss_pred hhHHhhcCCHHHHHHHHHHHHHhcc
Confidence 9999999999999999999998754
No 7
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.65 E-value=1.3e-15 Score=95.07 Aligned_cols=85 Identities=19% Similarity=0.233 Sum_probs=65.7
Q ss_pred hhHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHH
Q 047906 5 IWGVFIKQGKEQEEAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQE 84 (119)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~ 84 (119)
++.++...++..+...+.+.+.|..||+.|++++|++|+++|+|||++++++.++. ..|.++ .+.+|+|.+|.++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~---~~~~~~--~~~~p~l~~w~~~ 96 (107)
T cd03186 22 VDTIEKGRKKEAEKARKELRESLLALAPVFAHKPYFMSEEFSLVDCALAPLLWRLP---ALGIEL--PKQAKPLKDYMER 96 (107)
T ss_pred HHHHHhCcHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCcHHHHHHHHHHHHHH---HcCCCC--cccchHHHHHHHH
Confidence 34444434555566778899999999999988899999999999999887553332 235433 2579999999999
Q ss_pred Hhcchhhhhc
Q 047906 85 FLKVPVIKES 94 (119)
Q Consensus 85 ~~~~p~v~~~ 94 (119)
|.+||+|+.+
T Consensus 97 ~~~rpa~~~~ 106 (107)
T cd03186 97 VFARDSFQKS 106 (107)
T ss_pred HHCCHHHHHh
Confidence 9999999874
No 8
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=99.63 E-value=5.1e-15 Score=104.86 Aligned_cols=105 Identities=12% Similarity=0.194 Sum_probs=79.9
Q ss_pred cchhhHHHhhc-hHHHHHHHHHHHHHHHHHHHHhc------------------CCceecCCCCChhHHHHHHHHHHHHHH
Q 047906 2 FPSIWGVFIKQ-GKEQEEAFAQVFENFSFLEEELK------------------GKKFFGGEKIGYADLALGWIAERVFEL 62 (119)
Q Consensus 2 ~~~~~~~~~~~-~~~~~~~~~~~~~~l~~le~~L~------------------~~~fl~G~~~t~aDi~l~~~~~~~~~~ 62 (119)
++.++.++.+. +...+...+++.+.+..||+.|. +++||+|+++|+|||++++.+.++...
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~~~~~f~~Gd~~tlaD~~l~p~l~~l~~~ 185 (236)
T TIGR00862 106 FAKFSAYIKNSNPEANDNLEKGLLKALKKLDDYLNSPLPEEIDEDSAEDEKVSRRKFLDGDELTLADCNLLPKLHIVKVV 185 (236)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccCCCcccCCccchhhHHHHHHHHHHHHH
Confidence 34555544443 33444455668999999999986 468999999999999977755555432
Q ss_pred -HHh-CccccCCCcCccHHHHHHHHhcchhhhhcCCCHHHHHHHHHHH
Q 047906 63 -EEI-GVKVIEKEKFPLVSAWMQEFLKVPVIKESLPPHEKLVTKMRGI 108 (119)
Q Consensus 63 -~~~-~~~~~~~~~~p~l~~w~~~~~~~p~v~~~~~~~~~~~~~~~~~ 108 (119)
... ++++ .+.+|+|.+|+++|.++|+|+.++|+.+.+...|...
T Consensus 186 ~~~~~~~~i--~~~~p~l~~w~~~~~~~~sf~~t~p~~~~i~~~~~~~ 231 (236)
T TIGR00862 186 AKKYRNFDI--PAEFTGVWRYLSNAYAREEFTNTCPDDKEIELAYADV 231 (236)
T ss_pred HHHHhCcCc--cccCchHHHHHHHHhccchHHhhCCChHHHHHHHHHH
Confidence 223 5543 6899999999999999999999999988888888776
No 9
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.61 E-value=4.9e-15 Score=94.85 Aligned_cols=82 Identities=23% Similarity=0.395 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHHHhc---CCceecCCCCChhHHHHHHHHHHHHH-HHHh-CccccCCCcCccHHHHHHHHhcchhhhhcC
Q 047906 21 AQVFENFSFLEEELK---GKKFFGGEKIGYADLALGWIAERVFE-LEEI-GVKVIEKEKFPLVSAWMQEFLKVPVIKESL 95 (119)
Q Consensus 21 ~~~~~~l~~le~~L~---~~~fl~G~~~t~aDi~l~~~~~~~~~-~~~~-~~~~~~~~~~p~l~~w~~~~~~~p~v~~~~ 95 (119)
+++.+.++.||+.|+ +++|++| ++|+|||+++|.+.++.. +... +.++ .+++|+|.+|+++|.++|+|+++.
T Consensus 33 ~~~~~~l~~Le~~L~~~~~~~fl~G-~~tlADi~l~~~~~~~~~~~~~~~~~~~--~~~~P~l~~W~~~~~~rp~~~~~~ 109 (120)
T cd03203 33 AEAAAALDYIENALSKFDDGPFFLG-QFSLVDIAYVPFIERFQIFLSELFNYDI--TEGRPNLAAWIEEMNKIEAYTQTK 109 (120)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcCC-CccHHHHHHHHHHHHHHHHHHHhcCccc--cccCcHHHHHHHHHhcchHHHhHc
Confidence 345778888988886 4789999 999999997775544432 1122 4443 368999999999999999999999
Q ss_pred CCHHHHHHHH
Q 047906 96 PPHEKLVTKM 105 (119)
Q Consensus 96 ~~~~~~~~~~ 105 (119)
|+.+++.+++
T Consensus 110 ~~~~~~~~~~ 119 (120)
T cd03203 110 QDPQELLDLA 119 (120)
T ss_pred CCHHHHHhhh
Confidence 9999998865
No 10
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.61 E-value=5.9e-15 Score=90.08 Aligned_cols=71 Identities=34% Similarity=0.506 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhcch
Q 047906 15 EQEEAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLKVP 89 (119)
Q Consensus 15 ~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p 89 (119)
.++....++.+.|..+|+.|++++|++|+++|+||+++++++.|+..+ +.... .++||+|.+|+++|.+||
T Consensus 25 ~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~ADi~~~~~~~~~~~~---~~~~~-~~~~P~l~~w~~~~~~~P 95 (95)
T PF00043_consen 25 MVEEARAKVPRYLEVLEKRLKGGPYLVGDKLTIADIALFPMLDWLERL---GPDFL-FEKFPKLKKWYERMFARP 95 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSSSSSBSS-CHHHHHHHHHHHHHHHH---TTTTT-HTTSHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeeeccCCchhHHHHHHHHHHHHHh---CCCcc-cccCHHHHHHHHHHHcCC
Confidence 455567888999999999999889999999999999988766666544 43321 289999999999999987
No 11
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.57 E-value=2e-14 Score=91.40 Aligned_cols=77 Identities=21% Similarity=0.333 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhcchhhhhc
Q 047906 15 EQEEAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLKVPVIKES 94 (119)
Q Consensus 15 ~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~v~~~ 94 (119)
..+...+++.+.+..||+.|++++|++|+++|+||+++++++.|+.... ... ++.+.+|+|.+|+++|.++|+++++
T Consensus 38 ~~~~~~~~i~~~l~~le~~L~~~~yl~Gd~~tlADi~l~~~l~~~~~~~-~~~--~~~~~~P~L~~w~~r~~~rpa~~~~ 114 (115)
T cd03196 38 SEEEYRQQAEAFLKDLEARLQQHSYLLGDKPSLADWAIFPFVRQFAHVD-PKW--FDQSPYPRLRRWLNGFLASPLFSKI 114 (115)
T ss_pred cHHHHHHHHHHHHHHHHHHHccCCccCCCCccHHHHHHHHHHHHHHHhh-hcc--cCcccCHHHHHHHHHHHcChHHHhh
Confidence 3556778899999999999988899999999999999887555543321 111 2347899999999999999999875
No 12
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.56 E-value=2.4e-14 Score=89.81 Aligned_cols=74 Identities=18% Similarity=0.386 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhcchhhhhcC
Q 047906 16 QEEAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLKVPVIKESL 95 (119)
Q Consensus 16 ~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~v~~~~ 95 (119)
.+...+++.+.++.+|+.|++++|++|+++|+|||++++++.|+.. .+. +.+.+|+|.+|+++|.++|+|++++
T Consensus 41 ~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~aDi~~~~~~~~~~~---~~~---~~~~~p~l~~w~~~~~~~p~~k~~~ 114 (114)
T cd03188 41 KAAARERLAARLAYLDAQLAGGPYLLGDRFSVADAYLFVVLRWAPG---VGL---DLSDWPNLAAYLARVAARPAVQAAL 114 (114)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeeeCCCcchHHHHHHHHHHHHhh---cCC---ChhhChHHHHHHHHHHhCHHhHhhC
Confidence 3445677999999999999878899999999999998876665532 232 2468999999999999999998753
No 13
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.55 E-value=3.6e-14 Score=88.02 Aligned_cols=76 Identities=17% Similarity=0.283 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhcchhhhh
Q 047906 14 KEQEEAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLKVPVIKE 93 (119)
Q Consensus 14 ~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~v~~ 93 (119)
+..+...+++.+.++.||+.|++++|++|+++|+|||++++++.|.... +. .+.+|+|.+|+++|.++|++++
T Consensus 26 ~~~~~~~~~~~~~l~~le~~l~~~~~l~g~~~t~aDi~~~~~~~~~~~~---~~----~~~~p~l~~w~~~~~~~p~~~~ 98 (103)
T cd03207 26 PARMAGFGSYDDVLAALEQALAKGPYLLGERFTAADVLVGSPLGWGLQF---GL----LPERPAFDAYIARITDRPAFQR 98 (103)
T ss_pred chhhhhhhhHHHHHHHHHHHHccCCcccCCccCHHHHHHHHHHHHHHHc---CC----CCCChHHHHHHHHHHcCHHHHH
Confidence 3445567889999999999998789999999999999988877776432 32 3679999999999999999988
Q ss_pred cCC
Q 047906 94 SLP 96 (119)
Q Consensus 94 ~~~ 96 (119)
+..
T Consensus 99 ~~~ 101 (103)
T cd03207 99 AAA 101 (103)
T ss_pred Hhc
Confidence 754
No 14
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.55 E-value=3.3e-14 Score=89.80 Aligned_cols=78 Identities=19% Similarity=0.229 Sum_probs=61.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhcchhhh
Q 047906 13 GKEQEEAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLKVPVIK 92 (119)
Q Consensus 13 ~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~v~ 92 (119)
+...+...+++.+.++.||+.|++++|++|+++|+|||++++++.++... +... ..+.+|+|.+|.++|.++|+++
T Consensus 40 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~~~~~---~~~~-~~~~~p~l~~~~~~~~~~p~~~ 115 (118)
T cd03187 40 EAVVEENEEKLKKVLDVYEARLSKSKYLAGDSFTLADLSHLPYLQYLMAT---PFAK-LFDSRPHVKAWWEDISARPAWK 115 (118)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccCcccCCCCccHHHHHHHHHHHHHHHc---cchh-hhhcCchHHHHHHHHHhCHHHH
Confidence 34445567789999999999998889999999999999988766555321 1111 1467999999999999999998
Q ss_pred hc
Q 047906 93 ES 94 (119)
Q Consensus 93 ~~ 94 (119)
++
T Consensus 116 ~~ 117 (118)
T cd03187 116 KV 117 (118)
T ss_pred hh
Confidence 75
No 15
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.54 E-value=5.1e-14 Score=89.99 Aligned_cols=77 Identities=18% Similarity=0.378 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhcchhhhhcC
Q 047906 16 QEEAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLKVPVIKESL 95 (119)
Q Consensus 16 ~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~v~~~~ 95 (119)
.+...+.+.+.++.||+.|++++|++|+++|+||+++++++.|+..+ +... .+.||+|.+|.++|.++|++++++
T Consensus 33 ~~~~~~~~~~~l~~le~~L~~~~~l~G~~~T~aDi~l~~~~~~~~~~---~~~~--~~~~P~l~~~~~rv~~~p~vk~~~ 107 (121)
T cd03209 33 KPDYLAKLPDKLKLFSDFLGDRPWFAGDKITYVDFLLYEALDQHRIF---EPDC--LDAFPNLKDFLERFEALPKISAYM 107 (121)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCcCCCCccHHHHHHHHHHHHHHHh---Cccc--cccChHHHHHHHHHHHCHHHHHHH
Confidence 34456778999999999998789999999999999988777776532 2222 468999999999999999999976
Q ss_pred CC
Q 047906 96 PP 97 (119)
Q Consensus 96 ~~ 97 (119)
..
T Consensus 108 ~~ 109 (121)
T cd03209 108 KS 109 (121)
T ss_pred hc
Confidence 54
No 16
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.51 E-value=7.4e-14 Score=89.94 Aligned_cols=78 Identities=24% Similarity=0.367 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC---CceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhcchhh
Q 047906 15 EQEEAFAQVFENFSFLEEELKG---KKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLKVPVI 91 (119)
Q Consensus 15 ~~~~~~~~~~~~l~~le~~L~~---~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~v 91 (119)
..+...+++.+.|..||+.|++ ++|++|+++|+||+++++++.|+... +... .+.+|+|.+|+++|.++|+|
T Consensus 32 ~~~~~~~~~~~~l~~le~~L~~~~~~~~l~G~~~T~ADi~l~~~~~~~~~~---~~~~--~~~~P~l~~~~~rv~~~p~v 106 (126)
T cd03210 32 GKDDYIKDLPEQLKPFEKLLSKNNGKGFIVGDKISFADYNLFDLLDIHLVL---APGC--LDAFPLLKAFVERLSARPKL 106 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCccHHHHHHHHHHHHHHHh---ChHh--hhcChHHHHHHHHHHhCcHH
Confidence 3445567789999999999963 58999999999999988877776532 2222 47899999999999999999
Q ss_pred hhcCCC
Q 047906 92 KESLPP 97 (119)
Q Consensus 92 ~~~~~~ 97 (119)
++++..
T Consensus 107 ~~~~~~ 112 (126)
T cd03210 107 KAYLES 112 (126)
T ss_pred HHHHhC
Confidence 987654
No 17
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.51 E-value=1.1e-13 Score=87.49 Aligned_cols=73 Identities=18% Similarity=0.314 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhcchhh
Q 047906 14 KEQEEAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLKVPVI 91 (119)
Q Consensus 14 ~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~v 91 (119)
+..+....++.++|+.||+.|++++|++||++|+|||++++++.|+.. .+.++ ...+|+|.+|+++|.++|+|
T Consensus 45 ~~~~~~~~~l~~~l~~le~~L~~~~~l~gd~~t~aDi~l~~~~~~~~~---~~~~~--~~~~p~l~~w~~~~~~~p~~ 117 (117)
T cd03182 45 EWGERSKARAADFLAYLDTRLAGSPYVAGDRFTIADITAFVGLDFAKV---VKLRV--PEELTHLRAWYDRMAARPSA 117 (117)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHhHHHHh---cCCCC--ccccHHHHHHHHHHHhccCC
Confidence 334566788999999999999877899999999999998887777643 24432 36899999999999999975
No 18
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.51 E-value=6.1e-14 Score=88.09 Aligned_cols=78 Identities=21% Similarity=0.405 Sum_probs=62.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhcchhhh
Q 047906 13 GKEQEEAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLKVPVIK 92 (119)
Q Consensus 13 ~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~v~ 92 (119)
+...+....++.+.|+.+|+.|++++|++|+++|+|||++++++.|.... +... .+.+|++.+|.++|.++|+++
T Consensus 35 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~~~~~---~~~~--~~~~p~l~~w~~~~~~~p~~~ 109 (113)
T cd03178 35 PYAIERYTNEAKRLYGVLDKRLAGRDYLAGDEYSIADIAIFPWVRRLEWI---GIDD--LDDFPNVKRWLDRIAARPAVQ 109 (113)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHccCCcccCCCCCeeeeeHHHHHHHHHhc---cccc--hhhchHHHHHHHHHhhCHHHH
Confidence 33445567789999999999998789999999999999977766665322 3221 468999999999999999998
Q ss_pred hcC
Q 047906 93 ESL 95 (119)
Q Consensus 93 ~~~ 95 (119)
++.
T Consensus 110 ~~~ 112 (113)
T cd03178 110 RGL 112 (113)
T ss_pred Hhc
Confidence 864
No 19
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.51 E-value=1.8e-13 Score=87.11 Aligned_cols=73 Identities=22% Similarity=0.289 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHHHHhc--CCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhcchhhhhcCC
Q 047906 19 AFAQVFENFSFLEEELK--GKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLKVPVIKESLP 96 (119)
Q Consensus 19 ~~~~~~~~l~~le~~L~--~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~v~~~~~ 96 (119)
..+.+.+.|..+|+.|+ +++|++|+++|+|||++++++.|+... +.+ .+.+|+|.+|+++|.++|+++++.+
T Consensus 45 ~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~~~~~~~~---~~~---~~~~p~l~~w~~~~~~~p~~~~~~~ 118 (121)
T cd03191 45 YRHWIARGFAALEKLLAQTAGKFCFGDEPTLADICLVPQVYNARRF---GVD---LSPYPTIARINEACLELPAFQAAHP 118 (121)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeecCCcCCHHHHHHHHHHHHHHHh---CCC---cccCcHHHHHHHHHHhChhHHHhCc
Confidence 34568899999999997 357999999999999988876666432 432 4789999999999999999999876
Q ss_pred C
Q 047906 97 P 97 (119)
Q Consensus 97 ~ 97 (119)
.
T Consensus 119 ~ 119 (121)
T cd03191 119 D 119 (121)
T ss_pred C
Confidence 4
No 20
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.49 E-value=2e-13 Score=86.44 Aligned_cols=76 Identities=20% Similarity=0.289 Sum_probs=59.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCC----------ceecCCCCChhHHHHHHHHHHHHHHHHhCccc--cCCCcCccHHH
Q 047906 13 GKEQEEAFAQVFENFSFLEEELKGK----------KFFGGEKIGYADLALGWIAERVFELEEIGVKV--IEKEKFPLVSA 80 (119)
Q Consensus 13 ~~~~~~~~~~~~~~l~~le~~L~~~----------~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~--~~~~~~p~l~~ 80 (119)
....+....++...|..||..|.++ +|++|+++|+|||++++.+.|+..+ +... .....||+|.+
T Consensus 24 ~~~i~~~~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~~---~~~~~~~~~~~~P~l~~ 100 (111)
T cd03204 24 VEYLKKILDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKFL---GLSRRYWGNGKRPNLEA 100 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHHc---CccccccccccChHHHH
Confidence 3445667888999999999999653 4999999999999988876666532 3221 01257999999
Q ss_pred HHHHHhcchhh
Q 047906 81 WMQEFLKVPVI 91 (119)
Q Consensus 81 w~~~~~~~p~v 91 (119)
|+++|.+||+|
T Consensus 101 w~~rv~aRpsf 111 (111)
T cd03204 101 YFERVLQRESF 111 (111)
T ss_pred HHHHHHcCCCC
Confidence 99999999985
No 21
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.49 E-value=1.4e-13 Score=87.48 Aligned_cols=77 Identities=27% Similarity=0.491 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhcchhhhhc
Q 047906 15 EQEEAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLKVPVIKES 94 (119)
Q Consensus 15 ~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~v~~~ 94 (119)
..+...+++.+.|+.||+.|++++|++|+++|+||+++++++.|+... .+. +.+.+|+|.+|+++|.++|+|++.
T Consensus 35 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~aDi~l~~~~~~~~~~--~~~---~~~~~p~l~~w~~~~~~~p~~~~~ 109 (118)
T cd03177 35 PPEEKLDKLEEALDFLETFLEGSDYVAGDQLTIADLSLVATVSTLEAL--LPL---DLSKYPNVRAWLERLKALPPYEEA 109 (118)
T ss_pred CCHHHHHHHHHHHHHHHHHHccCCeeCCCCcCHHHHHHHHHHHHHHHh--cCC---ChhhCchHHHHHHHHHcccchHHH
Confidence 345567789999999999998778999999999999988777666431 232 246799999999999999999985
Q ss_pred CC
Q 047906 95 LP 96 (119)
Q Consensus 95 ~~ 96 (119)
.+
T Consensus 110 ~~ 111 (118)
T cd03177 110 NG 111 (118)
T ss_pred HH
Confidence 53
No 22
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=99.48 E-value=1.9e-13 Score=89.42 Aligned_cols=70 Identities=31% Similarity=0.422 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHhc--CCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhcchhhhhcCC
Q 047906 22 QVFENFSFLEEELK--GKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLKVPVIKESLP 96 (119)
Q Consensus 22 ~~~~~l~~le~~L~--~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~v~~~~~ 96 (119)
.+...|..||+.|+ +++|++|+++|+||+++++++.|+... +... .+.||+|.+|+++|.++|++++++.
T Consensus 43 ~~~~~l~~lE~~L~~~~~~~l~G~~~T~ADi~l~~~l~~~~~~---~~~~--l~~~P~l~~~~~rv~~~P~vk~~~~ 114 (137)
T cd03208 43 AKNRYFPVFEKVLKSHGQDFLVGNKLSRADIHLLEAILMVEEL---DPSL--LSDFPLLQAFKTRISNLPTIKKFLQ 114 (137)
T ss_pred HHHHHHHHHHHHHHhCCCCeeeCCCCCHHHHHHHHHHHHHHHh---chhh--hccChHHHHHHHHHHcCHHHHHHHh
Confidence 45799999999997 568999999999999988766666432 2221 4789999999999999999998654
No 23
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.48 E-value=4e-13 Score=83.05 Aligned_cols=73 Identities=26% Similarity=0.451 Sum_probs=58.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhcchhh
Q 047906 13 GKEQEEAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLKVPVI 91 (119)
Q Consensus 13 ~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~v 91 (119)
+...+....++.+.++.+|+.|++++|++|+++|+||++++++..|... .+. ..+.+|+|.+|.++|.++|++
T Consensus 28 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~---~~~---~~~~~p~l~~~~~~~~~~p~~ 100 (100)
T cd03206 28 PLDKETAIARAHRLLRLLEEHLAGRDWLAGDRPTIADVAVYPYVALAPE---GGV---DLEDYPAIRRWLARIEALPGF 100 (100)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHccCCccCCCCCCHHHHHHHHHHHHHhc---cCC---ChhhCcHHHHHHHHHHhCcCC
Confidence 3345667888999999999999888999999999999997765544321 121 247899999999999999975
No 24
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=99.48 E-value=4.5e-13 Score=93.09 Aligned_cols=84 Identities=18% Similarity=0.230 Sum_probs=65.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhcchhhh
Q 047906 13 GKEQEEAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLKVPVIK 92 (119)
Q Consensus 13 ~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~v~ 92 (119)
++..+...+++.+.+..+|+.|++++|++|+++|+||+++++++.++ ...+.++ ..+.+|+|.+|+++|.+||+|+
T Consensus 122 ~~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~~~~~---~~~~~~~-~~~~~p~l~~w~~~~~~rp~~~ 197 (211)
T PRK09481 122 ASEADAARKQLREELLAIAPVFGEKPYFMSEEFSLVDCYLAPLLWRL---PVLGIEL-SGPGAKELKGYMTRVFERDSFL 197 (211)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCcccCCCccHHHHHHHHHHHHH---HhcCCCC-CCCCChhHHHHHHHHhccHHHH
Confidence 34445566778899999999998789999999999999977644443 2235443 1367999999999999999999
Q ss_pred hcCCCHHH
Q 047906 93 ESLPPHEK 100 (119)
Q Consensus 93 ~~~~~~~~ 100 (119)
+++.+.++
T Consensus 198 ~~~~~~~~ 205 (211)
T PRK09481 198 ASLTEAER 205 (211)
T ss_pred HHcCHHHH
Confidence 98876443
No 25
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.48 E-value=3.7e-13 Score=86.22 Aligned_cols=78 Identities=26% Similarity=0.355 Sum_probs=60.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHh-cCCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhc--ch
Q 047906 13 GKEQEEAFAQVFENFSFLEEEL-KGKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLK--VP 89 (119)
Q Consensus 13 ~~~~~~~~~~~~~~l~~le~~L-~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~--~p 89 (119)
++..+...+++.+.++.+|+.+ ++++|++|+++|+|||++++.+.|... .+.+. .+.+|+|.+|+++|.+ ||
T Consensus 40 ~~~~~~~~~~~~~~l~~le~~l~~~~~~l~Gd~~t~ADi~l~~~~~~~~~---~~~~~--~~~~p~l~~w~~~~~~~~~p 114 (126)
T cd03183 40 PEKVKKAEENLEESLDLLENYFLKDKPFLAGDEISIADLSAVCEIMQPEA---AGYDV--FEGRPKLAAWRKRVKEAGNP 114 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHh---cCCcc--cccCchHHHHHHHHHHhcch
Confidence 3444556778999999999974 546899999999999997775555432 24332 4789999999999999 99
Q ss_pred hhhhcC
Q 047906 90 VIKESL 95 (119)
Q Consensus 90 ~v~~~~ 95 (119)
+++++.
T Consensus 115 ~~~~~~ 120 (126)
T cd03183 115 LFDEAH 120 (126)
T ss_pred hHHHHH
Confidence 998753
No 26
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=99.46 E-value=7.1e-13 Score=95.43 Aligned_cols=86 Identities=20% Similarity=0.320 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHHHhcC-CceecCCCCChhHHHHHHHHHHHHHH-HHh-CccccCCCcCccHHHHHHHHhcchhhhhcCC
Q 047906 20 FAQVFENFSFLEEELKG-KKFFGGEKIGYADLALGWIAERVFEL-EEI-GVKVIEKEKFPLVSAWMQEFLKVPVIKESLP 96 (119)
Q Consensus 20 ~~~~~~~l~~le~~L~~-~~fl~G~~~t~aDi~l~~~~~~~~~~-~~~-~~~~~~~~~~p~l~~w~~~~~~~p~v~~~~~ 96 (119)
.+++.+.|+.||+.|++ ++|++|+++|+||+++++.+.++... ... ++.+ .+.+|+|.+|+++|.++|+|+.+.+
T Consensus 173 ~~~l~~~l~~LE~~L~~~g~yl~Gd~~SlADi~l~p~L~~l~~~~~~~~~~~i--~~~~P~L~~w~~ri~~rps~~~~~~ 250 (265)
T PLN02817 173 EQALLDELTSFDDYIKENGPFINGEKISAADLSLGPKLYHLEIALGHYKNWSV--PDSLPFVKSYMKNIFSMESFVKTRA 250 (265)
T ss_pred HHHHHHHHHHHHHHHhcCCCeeCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCc--cccCHHHHHHHHHHhcchhHhhcCC
Confidence 45677889999999974 68999999999999988755554321 111 3332 4789999999999999999999999
Q ss_pred CHHHHHHHHHH
Q 047906 97 PHEKLVTKMRG 107 (119)
Q Consensus 97 ~~~~~~~~~~~ 107 (119)
..+.+.+-|+.
T Consensus 251 ~~~~~~~~~~~ 261 (265)
T PLN02817 251 LPEDVIAGWRP 261 (265)
T ss_pred CHHHHHHHhHh
Confidence 87777766654
No 27
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.45 E-value=8.7e-13 Score=82.18 Aligned_cols=69 Identities=22% Similarity=0.496 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHH-HHHHHHHHhCccccCCCcCccHHHHHHHHhcchhh
Q 047906 16 QEEAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIA-ERVFELEEIGVKVIEKEKFPLVSAWMQEFLKVPVI 91 (119)
Q Consensus 16 ~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~-~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~v 91 (119)
.+...+++.+.|+.||+.|++++|++|+++|+|||++++++ .|. ..+. +.+.+|+|.+|.++|.++|+|
T Consensus 41 ~~~~~~~~~~~l~~lE~~L~~~~~l~g~~~t~aDi~~~~~~~~~~----~~~~---~~~~~p~l~~~~~~~~~~p~~ 110 (110)
T cd03180 41 IAASLAAWAKLMAILDAQLAGRPYLAGDRFTLADIPLGCSAYRWF----ELPI---ERPPLPHLERWYARLRARPAF 110 (110)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHHHHH----Hccc---ccccCchHHHHHHHHHhCCCC
Confidence 34456789999999999998789999999999999977643 332 1122 257899999999999999975
No 28
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.44 E-value=5.1e-13 Score=77.24 Aligned_cols=68 Identities=26% Similarity=0.350 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHH
Q 047906 14 KEQEEAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQE 84 (119)
Q Consensus 14 ~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~ 84 (119)
..++...+++.+.++.||+.|++++|+.|+++|+||+++++.+.++..... +... .+.+|+|.+|++|
T Consensus 2 ~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~l~~~l~~~~~~~~-~~~~--~~~~p~l~~w~~r 69 (69)
T PF13410_consen 2 AAVERARAQLEAALDALEDHLADGPFLFGDRPSLADIALAPFLWRLRFVGP-DFDL--LEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSSBTTBSS--HHHHHHHHHHHHHHHCTH-TCCH--HTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHhCc-CcCc--cccCHHHHHHHhC
Confidence 456778889999999999999988899999999999997776656544311 2222 4789999999986
No 29
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.44 E-value=4.9e-13 Score=85.12 Aligned_cols=81 Identities=22% Similarity=0.384 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhcchhhhh
Q 047906 14 KEQEEAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLKVPVIKE 93 (119)
Q Consensus 14 ~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~v~~ 93 (119)
+..+...+.+.+.|..||+.|++++|++|+++|+||+++++++.|+... ..+... .+.+|++.+|.++|.++|+|++
T Consensus 36 ~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~siaDi~l~~~~~~~~~~-~~~~~~--~~~~p~l~~w~~~~~~~p~~~~ 112 (123)
T cd03181 36 KSVEAALEELDRVLGVLEERLLKRTYLVGERLTLADIFVAGALLLGFTY-VFDKEW--RAKYPNVTRWFNTVVNQPIFKA 112 (123)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCceeccCCccHHHHHHHHHHHHHHHH-HcCHHH--HHhChHHHHHHHHHHcCHHHHH
Confidence 4455567789999999999998789999999999999988877665332 112211 3679999999999999999999
Q ss_pred cCCC
Q 047906 94 SLPP 97 (119)
Q Consensus 94 ~~~~ 97 (119)
++++
T Consensus 113 ~~~~ 116 (123)
T cd03181 113 VFGE 116 (123)
T ss_pred HcCC
Confidence 8765
No 30
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.44 E-value=8.1e-13 Score=83.73 Aligned_cols=66 Identities=26% Similarity=0.462 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhcch
Q 047906 18 EAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLKVP 89 (119)
Q Consensus 18 ~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p 89 (119)
....++.+.|+.||+.|++++|++|+++|+|||++++++.|+... +. ..+.+|+|.+|+++|.++|
T Consensus 54 ~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~l~~~~~~~~~~---~~---~~~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 54 FINPELKKHLDFLEDRLAKKGYFVGDKLTAADIMMSFPLEAALAR---GP---LLEKYPNIAAYLERIEARP 119 (119)
T ss_pred HHhHHHHHHHHHHHHHHccCCCCCCCCCCHHHHHHHHHHHHHHHc---Cc---ccccCchHHHHHHHHhcCC
Confidence 345678999999999998889999999999999988877776432 32 2578999999999999986
No 31
>PLN02378 glutathione S-transferase DHAR1
Probab=99.42 E-value=1.7e-12 Score=90.44 Aligned_cols=84 Identities=19% Similarity=0.312 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHHHHHHhc--CCceecCCCCChhHHHHHHHHHHHHHH-HHh-CccccCCCcCccHHHHHHHHhcchhhhh
Q 047906 18 EAFAQVFENFSFLEEELK--GKKFFGGEKIGYADLALGWIAERVFEL-EEI-GVKVIEKEKFPLVSAWMQEFLKVPVIKE 93 (119)
Q Consensus 18 ~~~~~~~~~l~~le~~L~--~~~fl~G~~~t~aDi~l~~~~~~~~~~-~~~-~~~~~~~~~~p~l~~w~~~~~~~p~v~~ 93 (119)
...+.+.+.|..||+.|+ +++|++|+++|+||+++++.+.++... ..+ ++.. .+.||+|.+|+++|.++|++++
T Consensus 118 ~~~~~~~~~l~~le~~L~~~~~~fl~Gd~~T~ADi~l~~~~~~l~~~~~~~~~~~~--~~~~p~l~~w~~~~~~rpa~~~ 195 (213)
T PLN02378 118 GSEHALLVELEALENHLKSHDGPFIAGERVSAVDLSLAPKLYHLQVALGHFKSWSV--PESFPHVHNYMKTLFSLDSFEK 195 (213)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCcCCCCCchhhHHHHHHHHHHHHHHHHhcCCCc--hhHhHHHHHHHHHHhcCCCeec
Confidence 345677888999999996 468999999999999977765554322 111 2221 3689999999999999999999
Q ss_pred cCCCHHHHHH
Q 047906 94 SLPPHEKLVT 103 (119)
Q Consensus 94 ~~~~~~~~~~ 103 (119)
+++.......
T Consensus 196 ~~~~~~~~~~ 205 (213)
T PLN02378 196 TKTEEKYVIS 205 (213)
T ss_pred ccCChHHHHH
Confidence 9887655444
No 32
>PLN02473 glutathione S-transferase
Probab=99.40 E-value=1e-12 Score=91.12 Aligned_cols=77 Identities=17% Similarity=0.208 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhcchhhhhcCC
Q 047906 17 EEAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLKVPVIKESLP 96 (119)
Q Consensus 17 ~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~v~~~~~ 96 (119)
+....++.+.++.||+.|++++|++|+++|+||+++++.+.|+..... ...+ .+++|+|.+|+++|.++|+++++..
T Consensus 134 ~~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~~~~~~~~~~~~~~-~~~~--~~~~P~l~~w~~~~~~~p~~~~~~~ 210 (214)
T PLN02473 134 EELKVKFDKVLDVYENRLATNRYLGGDEFTLADLTHMPGMRYIMNETS-LSGL--VTSRENLNRWWNEISARPAWKKLME 210 (214)
T ss_pred HHHHHHHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHHHHhccc-cHHH--HhcCHHHHHHHHHHhcChhhHHHHH
Confidence 345567888999999999877899999999999998876666532111 1111 3689999999999999999998653
No 33
>PRK10542 glutathionine S-transferase; Provisional
Probab=99.39 E-value=1.5e-12 Score=89.36 Aligned_cols=73 Identities=21% Similarity=0.376 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhcchhhhhcCC
Q 047906 18 EAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLKVPVIKESLP 96 (119)
Q Consensus 18 ~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~v~~~~~ 96 (119)
...+.+.+.|+.+|+.|++++|++|+++|+||+++++++.|+.. .+. +.+.+|+|.+|+++|.++|+|++++.
T Consensus 124 ~~~~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~---~~~---~~~~~p~l~~w~~~~~~~p~~k~~~~ 196 (201)
T PRK10542 124 TVRAQLEKKFQYVDEALADEQWICGQRFTIADAYLFTVLRWAYA---VKL---NLEGLEHIAAYMQRVAERPAVAAALK 196 (201)
T ss_pred HHHHHHHHHHHHHHHHhcCCCeeeCCCCcHHhHHHHHHHHHhhc---cCC---CcccchHHHHHHHHHHcCHHHHHHHH
Confidence 34567899999999999878899999999999997776665532 233 24689999999999999999998753
No 34
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=99.38 E-value=3e-12 Score=88.44 Aligned_cols=73 Identities=21% Similarity=0.256 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHHhcC--CceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhcchhhhhcCC
Q 047906 19 AFAQVFENFSFLEEELKG--KKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLKVPVIKESLP 96 (119)
Q Consensus 19 ~~~~~~~~l~~le~~L~~--~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~v~~~~~ 96 (119)
..+.+.+.|..+|+.|++ ++|++|+++|+||+++++++.|+..+ +. +.++||+|.+|+++|.+||+++++.+
T Consensus 130 ~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~ADi~~~~~l~~~~~~---~~---~~~~~p~l~~~~~~~~~rp~~~~~~~ 203 (210)
T TIGR01262 130 YQHWISKGFAALEALLQPHAGAFCVGDTPTLADLCLVPQVYNAERF---GV---DLTPYPTLRRIAAALAALPAFQRAHP 203 (210)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCEeeCCCCCHHHHHHHHHHHHHHHc---CC---CcccchHHHHHHHHHhcCHHHHHhCc
Confidence 345688999999999975 46999999999999987766555322 32 24789999999999999999999877
Q ss_pred C
Q 047906 97 P 97 (119)
Q Consensus 97 ~ 97 (119)
+
T Consensus 204 ~ 204 (210)
T TIGR01262 204 E 204 (210)
T ss_pred c
Confidence 5
No 35
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=99.38 E-value=1.8e-12 Score=90.15 Aligned_cols=74 Identities=19% Similarity=0.308 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHH-HHHHHHHHhCccccCCCcCccHHHHHHHHhcchhhhhc
Q 047906 16 QEEAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIA-ERVFELEEIGVKVIEKEKFPLVSAWMQEFLKVPVIKES 94 (119)
Q Consensus 16 ~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~-~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~v~~~ 94 (119)
.+....++.+.|..||+.|++++|++|+++|+|||++++++ .|. ..+. +.+.||+|.+|+++|.++|+|+++
T Consensus 130 ~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~l~~~~~~~~----~~~~---~~~~~P~l~~w~~r~~~rp~~~~~ 202 (215)
T PRK13972 130 IERYQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWT----RQRI---DLAMYPAVKNWHERIRSRPATGQA 202 (215)
T ss_pred HHHHHHHHHHHHHHHHHHhccCccccCCCCCHHHHHHHHHHHHHh----hcCC---cchhCHHHHHHHHHHHhCHHHHHH
Confidence 34455678899999999998789999999999999976533 232 1132 357899999999999999999886
Q ss_pred CC
Q 047906 95 LP 96 (119)
Q Consensus 95 ~~ 96 (119)
..
T Consensus 203 ~~ 204 (215)
T PRK13972 203 LL 204 (215)
T ss_pred HH
Confidence 54
No 36
>PRK11752 putative S-transferase; Provisional
Probab=99.35 E-value=3.5e-12 Score=91.69 Aligned_cols=81 Identities=14% Similarity=0.235 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhC-ccccCCCcCccHHHHHHHHhcchhhhhcC
Q 047906 17 EEAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIG-VKVIEKEKFPLVSAWMQEFLKVPVIKESL 95 (119)
Q Consensus 17 ~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~-~~~~~~~~~p~l~~w~~~~~~~p~v~~~~ 95 (119)
+....++.+.|+.||+.|++++||+|+++|+|||++++++.++.....++ ...++.+.||+|.+|+++|.++|+|+++.
T Consensus 177 ~~~~~~~~~~L~~le~~L~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~~P~L~~w~~rv~~rPs~k~~~ 256 (264)
T PRK11752 177 NRFTMEAKRQLDVLDKQLAEHEYIAGDEYTIADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQRWAKEIAERPAVKRGR 256 (264)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCCccCHHHHHHHHHHHHHhhccccccccccCcccCHHHHHHHHHHHhCHHHHHHH
Confidence 34456688999999999987789999999999999776554443211011 11223578999999999999999999876
Q ss_pred CC
Q 047906 96 PP 97 (119)
Q Consensus 96 ~~ 97 (119)
..
T Consensus 257 ~~ 258 (264)
T PRK11752 257 IV 258 (264)
T ss_pred hc
Confidence 43
No 37
>PRK10357 putative glutathione S-transferase; Provisional
Probab=99.35 E-value=6.9e-12 Score=86.27 Aligned_cols=77 Identities=10% Similarity=0.113 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhcchhhhhcCC
Q 047906 17 EEAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLKVPVIKESLP 96 (119)
Q Consensus 17 ~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~v~~~~~ 96 (119)
+...+++...|+.||+.|.+++ ++|+++|+||+++++.+.|+... ..+..+ .+.+|+|.+|+++|.+||+|+++.|
T Consensus 124 ~~~~~~l~~~l~~le~~L~~~~-l~Gd~~t~ADi~l~~~l~~~~~~-~~~~~~--~~~~p~l~~~~~~i~~rp~~~~~~~ 199 (202)
T PRK10357 124 LRQREKINRSLDALEGYLVDGT-LKTDTVNLATIAIACAVGYLNFR-RVAPGW--CVDRPHLVKLVENLFQRESFARTEP 199 (202)
T ss_pred HHHHHHHHHHHHHHHHhhccCc-ccCCCcCHHHHHHHHHHHHHHhc-ccCcch--hhcChHHHHHHHHHhcChhhhhcCC
Confidence 4456778999999999997767 99999999999988877766431 112111 3679999999999999999999987
Q ss_pred C
Q 047906 97 P 97 (119)
Q Consensus 97 ~ 97 (119)
+
T Consensus 200 ~ 200 (202)
T PRK10357 200 P 200 (202)
T ss_pred C
Confidence 5
No 38
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.33 E-value=4.6e-12 Score=87.71 Aligned_cols=73 Identities=23% Similarity=0.327 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHHhcC--CceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhcchhhhhcCC
Q 047906 19 AFAQVFENFSFLEEELKG--KKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLKVPVIKESLP 96 (119)
Q Consensus 19 ~~~~~~~~l~~le~~L~~--~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~v~~~~~ 96 (119)
..+.+.+.+..||+.|++ ++|++|+++|+||+++++++.++.. ..+. +.++||+|.+|.++|.++|++++++.
T Consensus 124 ~~~~~~~~l~~le~~L~~~~~~~l~Gd~~T~AD~~l~~~~~~~~~--~~~~---~l~~~P~l~~~~~r~~~~P~~k~y~~ 198 (205)
T PTZ00057 124 LNEELPKWSGYFENILKKNHCNYFVGDNLTYADLAVFNLYDDIET--KYPN---SLKNFPLLKAHNEFISNLPNIKNYIS 198 (205)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeeeCCcccHHHHHHHHHHHHHHH--hChh---hhccChhHHHHHHHHHhChHHHHHHH
Confidence 456789999999999964 3799999999999997765555432 1122 24789999999999999999998754
No 39
>PLN02395 glutathione S-transferase
Probab=99.32 E-value=8.3e-12 Score=86.57 Aligned_cols=78 Identities=26% Similarity=0.313 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhcchhhhhcC
Q 047906 16 QEEAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLKVPVIKESL 95 (119)
Q Consensus 16 ~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~v~~~~ 95 (119)
.+...+++.+.++.||+.|++++|++|+++|+||+++++++.|+.. ..+.. ...+.+|+|.+|+++|.++|++++++
T Consensus 132 ~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~--~~~~~-~~~~~~p~L~~w~~~~~~rp~~k~~~ 208 (215)
T PLN02395 132 IKESEEKLAKVLDVYEARLSKSKYLAGDFVSLADLAHLPFTEYLVG--PIGKA-YLIKDRKHVSAWWDDISSRPAWKEVL 208 (215)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCccccCCCcCHHHHHHHHHHHHHhc--ccchh-hhhccCchHHHHHHHHHcChHHHHHH
Confidence 3455677899999999999877999999999999997664444321 11111 11467999999999999999999875
Q ss_pred C
Q 047906 96 P 96 (119)
Q Consensus 96 ~ 96 (119)
.
T Consensus 209 ~ 209 (215)
T PLN02395 209 A 209 (215)
T ss_pred H
Confidence 4
No 40
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.31 E-value=9.1e-12 Score=78.96 Aligned_cols=70 Identities=21% Similarity=0.184 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHHHHhc-CCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhcchhhhhcC
Q 047906 17 EEAFAQVFENFSFLEEELK-GKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLKVPVIKESL 95 (119)
Q Consensus 17 ~~~~~~~~~~l~~le~~L~-~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~v~~~~ 95 (119)
+...+++.+.++.+|..|+ +++|++| ++|+||+++++++.|+... |.++ + |++.+|.+||.+||+|++.+
T Consensus 41 ~~~~~~~~~~~~~le~~l~~~~~~l~G-~fSiAD~~l~~~~~~~~~~---g~~l---~--p~l~ay~~r~~~rPa~~~~~ 111 (114)
T cd03195 41 EAAQAAAEKLIAVAEALLPPGAANLFG-EWCIADTDLALMLNRLVLN---GDPV---P--ERLRDYARRQWQRPSVQAWL 111 (114)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcccC-CccHHHHHHHHHHHHHHHc---CCCC---C--HHHHHHHHHHHCCHHHHHHH
Confidence 4567778888999999985 4589999 5999999999888887543 5542 3 99999999999999999865
No 41
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.31 E-value=1.3e-11 Score=78.37 Aligned_cols=67 Identities=22% Similarity=0.320 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHHh---cCCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhcchhhhhcC
Q 047906 20 FAQVFENFSFLEEEL---KGKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLKVPVIKESL 95 (119)
Q Consensus 20 ~~~~~~~l~~le~~L---~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~v~~~~ 95 (119)
.+.+.+.+..+|..+ ++++|++|| +|+||+++++++.|...+ +.+ . .|+|.+|+++|.++|+|++.+
T Consensus 43 ~~~~~~~~~~le~~l~~~~~~~yl~Gd-~T~ADi~l~~~~~~~~~~---~~~---~--~P~l~~~~~rv~~rPsv~~~~ 112 (114)
T cd03194 43 QADIARIEAIWAECLARFQGGPFLFGD-FSIADAFFAPVVTRFRTY---GLP---L--SPAAQAYVDALLAHPAMQEWI 112 (114)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCCC-CcHHHHHHHHHHHHHHHc---CCC---C--CHHHHHHHHHHHCCHHHHHHH
Confidence 344445555555544 456899999 999999988877776432 422 2 399999999999999998865
No 42
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.30 E-value=1.5e-11 Score=79.16 Aligned_cols=67 Identities=25% Similarity=0.293 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhc
Q 047906 17 EEAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLK 87 (119)
Q Consensus 17 ~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~ 87 (119)
+...+++.+.|+.+|+.|++++|++|+++|+||++++..+.|+.... +.+. .+.+|+|.+|++||.+
T Consensus 57 ~~~~~~~~~~l~~l~~~L~~~~fl~Gd~~t~AD~~l~~~l~~~~~~~--~~~~--~~~~p~l~~W~~r~~~ 123 (124)
T cd03202 57 EAALANFRAALEPLRATLKGQPFLGGAAPNYADYIVFGGFQWARIVS--PFPL--LEEDDPVYDWFERCLD 123 (124)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCccCCCCCchhHHHHHHHHHHHHHcC--cccc--cccCChHHHHHHHHhc
Confidence 34567789999999999988899999999999999877666664321 3332 4689999999999986
No 43
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.29 E-value=2e-11 Score=75.49 Aligned_cols=68 Identities=22% Similarity=0.365 Sum_probs=54.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHh
Q 047906 13 GKEQEEAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFL 86 (119)
Q Consensus 13 ~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~ 86 (119)
++..+...+++.+.++.||+.|++++|++|+++|+|||++++++.|+.. .+. +.+++|+|.+|.++++
T Consensus 38 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~slaDi~~~~~~~~~~~---~~~---~~~~~p~l~~~~~~~~ 105 (105)
T cd03179 38 AEVLAFLRERGHAALAVLEAHLAGRDFLVGDALTIADIALAAYTHVADE---GGF---DLADYPAIRAWLARIE 105 (105)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCccccCCCCCHHHHHHHHHHHhccc---cCC---ChHhCccHHHHHHhhC
Confidence 3445567788999999999999878899999999999998887777632 132 2467999999999874
No 44
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=99.23 E-value=7.3e-11 Score=71.70 Aligned_cols=70 Identities=24% Similarity=0.445 Sum_probs=54.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHH
Q 047906 13 GKEQEEAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEF 85 (119)
Q Consensus 13 ~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~ 85 (119)
++..+...+++.+.+..||+.|++++|++|+++|+||+++++++.|+..... .... .+.+|++.+|.++|
T Consensus 31 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~t~aDi~~~~~l~~~~~~~~-~~~~--~~~~p~l~~~~~~~ 100 (100)
T cd00299 31 EAALEEAREELAAALAALEKLLAGRPYLAGDRFSLADIALAPVLARLDLLGP-LLGL--LDEYPRLAAWYDRL 100 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCcCHHHHHHHHHHHHHHHhhh-hhhh--hccCccHHHHHHhC
Confidence 4455667788999999999999888999999999999998887777654321 1111 36899999999875
No 45
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=99.22 E-value=5.8e-11 Score=71.71 Aligned_cols=70 Identities=16% Similarity=0.218 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhCcc-c-cCCCcCccHHHHHHHHh
Q 047906 16 QEEAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIGVK-V-IEKEKFPLVSAWMQEFL 86 (119)
Q Consensus 16 ~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~-~-~~~~~~p~l~~w~~~~~ 86 (119)
+....+++.+.++.+|+.|++++|++|+++|+||+++++.+.|+... ..+.. . .+.+.+|+|.+|.++|.
T Consensus 17 ~~~~~~~~~~~l~~le~~L~~~~yl~Gd~~t~aDi~l~~~l~~~~~~-~~~~~~~~~~~~~~p~l~~~~~r~~ 88 (88)
T cd03193 17 TREIYSLAKKDLKALSDLLGDKKFFFGDKPTSLDATVFGHLASILYA-PLPNSALQLILKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCccCCCCCCHHHHHHHHHHHHHHhc-CCCChHHHHHHHhCcHHHHHHHHhC
Confidence 34567788999999999998889999999999999987765555321 01110 0 01367999999999974
No 46
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=99.18 E-value=1e-10 Score=72.39 Aligned_cols=68 Identities=24% Similarity=0.292 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcC--CceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHH
Q 047906 14 KEQEEAFAQVFENFSFLEEELKG--KKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEF 85 (119)
Q Consensus 14 ~~~~~~~~~~~~~l~~le~~L~~--~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~ 85 (119)
...+...+.+.+.++.||+.|.+ ++|++|+++|+||+++++++.|+... +... ..+.+|+|.+|.+++
T Consensus 35 ~~~~~~~~~~~~~l~~le~~l~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~---~~~~-~~~~~p~l~~~~~~~ 104 (104)
T cd03192 35 KKKEFLKEAIPKYLKKLEKILKENGGGYLVGDKLTWADLVVFDVLDYLLYL---DPKL-LLKKYPKLKALRERV 104 (104)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHcCCCeeeCCCccHHHHHHHHHHHHHHhh---Cchh-hHHhChhHHHHHHhC
Confidence 33445567789999999999976 78999999999999988766666432 3221 146799999999875
No 47
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.16 E-value=1.7e-10 Score=79.94 Aligned_cols=73 Identities=26% Similarity=0.441 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhcchhhh
Q 047906 14 KEQEEAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLKVPVIK 92 (119)
Q Consensus 14 ~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~v~ 92 (119)
+..+...+.+...+..+|..|++++|++|+++|+||+++++++.|+... +.. .+.+|++.+|++||.++|++.
T Consensus 127 ~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~tiAD~~~~~~~~~~~~~---~~~---~~~~p~l~~w~~r~~~rp~~~ 199 (211)
T COG0625 127 AALEAARAEIRALLALLEALLADGPYLAGDRFTIADIALAPLLWRLALL---GEE---LADYPALKAWYERVLARPAFR 199 (211)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHHhhhc---Ccc---cccChHHHHHHHHHHcCCchh
Confidence 4445567789999999999998889999999999999988766664322 322 378999999999999999964
No 48
>PRK10387 glutaredoxin 2; Provisional
Probab=99.14 E-value=9e-11 Score=81.02 Aligned_cols=67 Identities=13% Similarity=0.094 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhcchhhh
Q 047906 18 EAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLKVPVIK 92 (119)
Q Consensus 18 ~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~v~ 92 (119)
...+++.+.|..+|+.|++ +|++|+++|+||+++++++.|+.... + .+.+|+|.+|++||.+||++.
T Consensus 142 ~~~~~~~~~l~~le~~L~~-~~l~G~~~s~ADi~l~~~l~~~~~~~--~-----~~~~p~l~~w~~r~~~r~~~~ 208 (210)
T PRK10387 142 GLIKEINADLRALDPLIVK-PNAVNGELSTDDIHLFPILRNLTLVK--G-----IEWPPRVADYRDNMSKKTQVP 208 (210)
T ss_pred HHHHHHHHHHHHHHHHhcC-ccccCCCCCHHHHHHHHHHhcceeec--C-----CCCCHHHHHHHHHHHHHhCCC
Confidence 3466788999999999976 99999999999999887666654321 2 134699999999999999874
No 49
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=99.13 E-value=2.5e-10 Score=70.46 Aligned_cols=58 Identities=14% Similarity=0.176 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhc
Q 047906 21 AQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLK 87 (119)
Q Consensus 21 ~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~ 87 (119)
.++.+.+..+|+.|++++|++|+++|+|||++++.+.+. +. +.+.+|+|.+|+++|.+
T Consensus 38 ~~~~~~l~~le~~L~~~~fl~Gd~~tiADi~l~~~l~~~------~~---~~~~~p~l~~w~~r~~~ 95 (96)
T cd03200 38 KEKAAVLRALNSALGRSPWLVGSEFTVADIVSWCALLQT------GL---ASAAPANVQRWLKSCEN 95 (96)
T ss_pred HHHHHHHHHHHHHHcCCCccCCCCCCHHHHHHHHHHHHc------cc---ccccChHHHHHHHHHHh
Confidence 456678889999998889999999999999977644331 22 24689999999999986
No 50
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.10 E-value=2.3e-10 Score=70.56 Aligned_cols=66 Identities=18% Similarity=0.288 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCc--eecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhc
Q 047906 15 EQEEAFAQVFENFSFLEEELKGKK--FFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLK 87 (119)
Q Consensus 15 ~~~~~~~~~~~~l~~le~~L~~~~--fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~ 87 (119)
..+...+++.+.++.+++.|++.+ ||+|+++|+||+++++ .+..+.. . .+ .+++|+|.+|++||++
T Consensus 32 ~~~~~~~~~~~~l~~l~~~L~~~~~~~l~G~~~T~AD~~v~~---~l~~~~~-~-~~--~~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 32 SGDFSREELPKALKILEKHLAERGGDFLVGDKPTLADIAVFG---FLASLRW-A-DF--PKDYPNLVRWYERIEE 99 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSSSSSSSSS--HHHHHHHH---HHHHHHC-C-HH--TTTCHHHHHHHHHHHT
T ss_pred hHHhhHHHHHHHHHHHHHHHHcCCCeeecCCCCCHHHHHHHH---HHHHHhh-c-cc--ccccHHHHHHHHhhcC
Confidence 334567889999999999997644 9999999999999444 4433321 2 22 2689999999999974
No 51
>PRK15113 glutathione S-transferase; Provisional
Probab=99.07 E-value=4.7e-10 Score=78.08 Aligned_cols=73 Identities=18% Similarity=0.088 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHHHHhcC-CceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhcchhhhhcC
Q 047906 17 EEAFAQVFENFSFLEEELKG-KKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLKVPVIKESL 95 (119)
Q Consensus 17 ~~~~~~~~~~l~~le~~L~~-~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~v~~~~ 95 (119)
+...+++.+.+..+|+.|++ ++|++|+ +|+||+++++++.|+.. .+.. . .|+|.+|.+||.+||+|++++
T Consensus 136 ~~~~~~~~~~l~~le~~L~~~~~~l~G~-~TlADi~l~~~l~~~~~---~~~~---~--~p~l~~~~~r~~~rp~~~~~~ 206 (214)
T PRK15113 136 EAGKAAAEKLFAVAERLLAPGQPNLFGE-WCIADTDLALMLNRLVL---HGDE---V--PERLADYATFQWQRASVQRWL 206 (214)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEeeCC-ccHHHHHHHHHHHHHHH---cCCC---C--CHHHHHHHHHHhcCHHHHHHH
Confidence 44567788999999999964 5799996 99999998876555532 2332 2 299999999999999999876
Q ss_pred CCH
Q 047906 96 PPH 98 (119)
Q Consensus 96 ~~~ 98 (119)
...
T Consensus 207 ~~~ 209 (214)
T PRK15113 207 ALS 209 (214)
T ss_pred HHh
Confidence 543
No 52
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.04 E-value=1.2e-09 Score=67.20 Aligned_cols=67 Identities=18% Similarity=0.228 Sum_probs=51.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHH
Q 047906 13 GKEQEEAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEF 85 (119)
Q Consensus 13 ~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~ 85 (119)
++..+...+++.+.|..+|+.|++++| +++|+|||++++.+.|+.... .+... .+.+|+|.+|+++|
T Consensus 32 ~~~~~~~~~~~~~~l~~le~~L~~~~~---d~~TlADi~l~~~l~~~~~~~-~~~~~--~~~~p~l~~w~~rm 98 (98)
T cd03205 32 QPWLERQRGKIERALDALEAELAKLPL---DPLDLADIAVACALGYLDFRH-PDLDW--RAAHPALAAWYARF 98 (98)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhCCC---CCCCHHHHHHHHHHHHHHhHc-cCcch--hhhChHHHHHHHhC
Confidence 344555678899999999999987787 999999999998888875321 12221 47899999999986
No 53
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=98.98 E-value=2.3e-09 Score=73.91 Aligned_cols=105 Identities=13% Similarity=0.227 Sum_probs=76.3
Q ss_pred cchhhHHHhhc-hHHHHHHHHHHHHHHHHHHHHhcC---CceecCCCCChhHHHHHHHHHHHHH-HHHh-CccccCCCcC
Q 047906 2 FPSIWGVFIKQ-GKEQEEAFAQVFENFSFLEEELKG---KKFFGGEKIGYADLALGWIAERVFE-LEEI-GVKVIEKEKF 75 (119)
Q Consensus 2 ~~~~~~~~~~~-~~~~~~~~~~~~~~l~~le~~L~~---~~fl~G~~~t~aDi~l~~~~~~~~~-~~~~-~~~~~~~~~~ 75 (119)
|..+-+.+-++ +...+.....+.+.|..|++.|+. ++|+.||++|.||+.++|=+.-+.. ...+ ++.. ++.+
T Consensus 106 F~kF~~fi~ksk~~~n~~~e~~Ll~~L~~Ld~yL~sp~~~~Fl~Gd~lt~aDcsLlPKL~~i~va~k~yk~~~I--P~~l 183 (221)
T KOG1422|consen 106 FAKFSAFIKKSKDAANDGLEKALLKELEKLDDYLKSPSRRKFLDGDKLTLADCSLLPKLHHIKVAAKHYKNFEI--PASL 183 (221)
T ss_pred HHHHHHHHhCchhhccchHHHHHHHHHHHHHHHhcCccCCccccCCeeeeehhhhchhHHHHHHHHHHhcCCCC--chhh
Confidence 33344443343 434444556688889999999974 7999999999999997773333332 2333 4543 6889
Q ss_pred ccHHHHHHHHhcchhhhhcCCCHHHHHHHHHHH
Q 047906 76 PLVSAWMQEFLKVPVIKESLPPHEKLVTKMRGI 108 (119)
Q Consensus 76 p~l~~w~~~~~~~p~v~~~~~~~~~~~~~~~~~ 108 (119)
+++.+|+..+-++.+|..++|..+.+...|...
T Consensus 184 t~V~rYl~~~ya~d~F~~tcp~d~ei~~~y~~~ 216 (221)
T KOG1422|consen 184 TGVWRYLKNAYARDEFTNTCPADQEIILAYAPV 216 (221)
T ss_pred hHHHHHHHHHHhHHHhhcCCchHHHHHHhhhhh
Confidence 999999999999999999999887777666554
No 54
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=98.96 E-value=8.8e-09 Score=73.33 Aligned_cols=85 Identities=16% Similarity=0.201 Sum_probs=65.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcC----CceecCCCCChhHHHHHHHHHHHHHHHHhCc--cccCCCcCccHHHHHHHHh
Q 047906 13 GKEQEEAFAQVFENFSFLEEELKG----KKFFGGEKIGYADLALGWIAERVFELEEIGV--KVIEKEKFPLVSAWMQEFL 86 (119)
Q Consensus 13 ~~~~~~~~~~~~~~l~~le~~L~~----~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~--~~~~~~~~p~l~~w~~~~~ 86 (119)
....++...++...|+.+|..|.+ ..|++|+.+|+||+++++++..+. .+|. ..+..-+.|+|.+|++|++
T Consensus 200 ~s~lkkild~l~~~Ld~VEteLe~r~~~~~wL~G~efslADVsLg~~LhRL~---~Lg~e~~yw~~gsrpnle~Yf~rvr 276 (325)
T KOG4420|consen 200 VSYLKKILDELAMVLDQVETELEKRKLCELWLCGCEFSLADVSLGATLHRLK---FLGLEKKYWEDGSRPNLESYFERVR 276 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccceeeccccchHHHHHHHHHHHHHH---HcccHHHhcccCCCccHHHHHHHHH
Confidence 344556677788899999999965 589999999999999887555443 3354 2333457899999999999
Q ss_pred cchhhhhcCCCHHH
Q 047906 87 KVPVIKESLPPHEK 100 (119)
Q Consensus 87 ~~p~v~~~~~~~~~ 100 (119)
.|+++.+.+++...
T Consensus 277 rR~sf~kvlg~~fn 290 (325)
T KOG4420|consen 277 RRFSFRKVLGDIFN 290 (325)
T ss_pred hhhHHHHhhhhHHH
Confidence 99999999876433
No 55
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.90 E-value=7.2e-10 Score=79.35 Aligned_cols=98 Identities=16% Similarity=0.325 Sum_probs=72.5
Q ss_pred hHHHhh-chHHHHHHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHh---Cc--cccCCCcCccHH
Q 047906 6 WGVFIK-QGKEQEEAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEI---GV--KVIEKEKFPLVS 79 (119)
Q Consensus 6 ~~~~~~-~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~---~~--~~~~~~~~p~l~ 79 (119)
|++-++ +++..+++.+++.+.|+.||..|+++.|++||++|-||+-+++ -+.++..+ .+ ++-...+||+|.
T Consensus 192 Yk~GFA~tq~aYeea~~~lF~~Ld~lE~~L~~~ryl~Gd~lTEAD~RLft---TlvRFD~VYvgHFKCN~~rI~dypnL~ 268 (324)
T COG0435 192 YKAGFATTQEAYEEAVKKLFEALDKLEQILSERRYLTGDQLTEADIRLFT---TLVRFDPVYVGHFKCNLRRIRDYPNLW 268 (324)
T ss_pred eeecccchHHHHHHHHHHHHHHHHHHHHHhhcCeeeccccchHhhhhhhh---eeEeecceEEeeeecccchhhcCchHH
Confidence 444454 5778888999999999999999998999999999999999665 33333222 11 221235699999
Q ss_pred HHHHHHhcchhhhhcCCCHHHHHHHHH
Q 047906 80 AWMQEFLKVPVIKESLPPHEKLVTKMR 106 (119)
Q Consensus 80 ~w~~~~~~~p~v~~~~~~~~~~~~~~~ 106 (119)
.|+..+-..|+|..+..-..--..|++
T Consensus 269 ~yLr~LYq~pg~~~T~df~hIK~hYyr 295 (324)
T COG0435 269 GYLRDLYQLPGFAETVDFDHIKLHYYR 295 (324)
T ss_pred HHHHHHhcCcccccccchhHhhhhhee
Confidence 999999999999998754333334444
No 56
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=98.89 E-value=1.9e-09 Score=74.92 Aligned_cols=66 Identities=11% Similarity=0.224 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCc-cHHHHHHHHhcchhhh
Q 047906 18 EAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFP-LVSAWMQEFLKVPVIK 92 (119)
Q Consensus 18 ~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p-~l~~w~~~~~~~p~v~ 92 (119)
+..+++.+.|+.+|..|++++|++| ++|+||+++++.+.|+... + ...+| +|.+|++||++++++.
T Consensus 141 ~~~~~~~~~l~~le~~L~~~~~l~g-~~TiADi~l~~~l~~~~~~---~-----~~~~p~~l~~w~~Ri~ar~~~~ 207 (209)
T TIGR02182 141 GLLEEINADLEELDKLIDGPNAVNG-ELSEDDILVFPLLRNLTLV---A-----GINWPSRVADYLDNMSKKSKVP 207 (209)
T ss_pred HHHHHHHHHHHHHHHHHhCccccCC-CCCHHHHHHHHHhcCeeee---c-----CCCCChHHHHHHHHHHHHhCCC
Confidence 4567788999999999988899955 6999999977655554321 1 12367 9999999999998764
No 57
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=98.87 E-value=8.2e-09 Score=66.64 Aligned_cols=68 Identities=12% Similarity=0.097 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHH--HHhCccccCCCcCccHHHHHHHH
Q 047906 17 EEAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFEL--EEIGVKVIEKEKFPLVSAWMQEF 85 (119)
Q Consensus 17 ~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~--~~~~~~~~~~~~~p~l~~w~~~~ 85 (119)
++..+.+.+.++.|+..|++++||+||++|.+|+++++++.++... ........ ...+|+|.+|.+||
T Consensus 56 ee~~~~~~~~l~aLs~~Lg~~~~l~Gd~pT~~Da~vf~~la~~~~~~~~~~~l~~~-~~~~pnL~~y~~Ri 125 (126)
T cd03211 56 DQVIEEVDQCCQALSQRLGTQPYFFGDQPTELDALVFGHLFTILTTQLPNDELAEK-VKKYSNLLAFCRRI 125 (126)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCcHHHHHHHHHHHHHHhcCCCChHHHHH-HHhCcHHHHHHHhc
Confidence 4456667889999999999899999999999999987755454321 00011111 36899999999997
No 58
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.86 E-value=1.3e-08 Score=71.73 Aligned_cols=79 Identities=24% Similarity=0.354 Sum_probs=61.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHH--HHhCccccCCCcCccHHHHHHHHhcchh
Q 047906 13 GKEQEEAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFEL--EEIGVKVIEKEKFPLVSAWMQEFLKVPV 90 (119)
Q Consensus 13 ~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~--~~~~~~~~~~~~~p~l~~w~~~~~~~p~ 90 (119)
.........++...++.+|..|.++.|++|+++|+||+.+.+ .+..+ ...+. .+..++|++.+|++++.++|+
T Consensus 128 ~~~~~~~~~~~~~~~~~~e~~l~~~~yl~g~~~tlADl~~~~---~~~~~~~~~~~~--~~~~~~p~v~~W~~~~~~~P~ 202 (226)
T KOG0867|consen 128 PTAVKELEAKLRKALDNLERFLKTQVYLAGDQLTLADLSLAS---TLSQFQGKFATE--KDFEKYPKVARWYERIQKRPA 202 (226)
T ss_pred chhhHHHHHHHHHHHHHHHHHHccCCcccCCcccHHHHHHhh---HHHHHhHhhhhh--hhhhhChHHHHHHHHHHhCcc
Confidence 344456678899999999999988899999999999999665 44333 11111 236899999999999999998
Q ss_pred hhhcCC
Q 047906 91 IKESLP 96 (119)
Q Consensus 91 v~~~~~ 96 (119)
.++..+
T Consensus 203 ~~e~~~ 208 (226)
T KOG0867|consen 203 YEEANE 208 (226)
T ss_pred HHHHHH
Confidence 877654
No 59
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=98.85 E-value=1.3e-08 Score=67.43 Aligned_cols=64 Identities=20% Similarity=0.311 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHh-cCCceecCCCCChhHHHHHHHHHHHHHHHHh-CccccCCCcCccHHHHHHHHhc
Q 047906 19 AFAQVFENFSFLEEEL-KGKKFFGGEKIGYADLALGWIAERVFELEEI-GVKVIEKEKFPLVSAWMQEFLK 87 (119)
Q Consensus 19 ~~~~~~~~l~~le~~L-~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~-~~~~~~~~~~p~l~~w~~~~~~ 87 (119)
..+.+.+.++..-+.+ ++++|++|+++|+||++++ .++..+..+ +.+ +...+|+|.+|++||++
T Consensus 80 ~r~~L~~a~~~w~~~~~~~~~FlaGd~ptIADisvy---g~l~s~e~~~~~~--Dl~~~p~I~~W~eRm~~ 145 (149)
T cd03197 80 VREWLYDALNTWVAALGKDRQFHGGSKPNLADLAVY---GVLRSVEGHPAFK--DMVEETKIGEWYERMDA 145 (149)
T ss_pred HHHHHHHHHHHHHHHhcCCCCccCCCCCCHHHHHHH---HHHHHHHHhcccc--chhhCcCHHHHHHHHHH
Confidence 3455555555444445 3468999999999999955 455555544 331 35789999999999986
No 60
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=98.82 E-value=2.5e-08 Score=65.32 Aligned_cols=70 Identities=14% Similarity=0.229 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhC---ccccCCCcCccHHHHHHHHhc
Q 047906 16 QEEAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIG---VKVIEKEKFPLVSAWMQEFLK 87 (119)
Q Consensus 16 ~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~---~~~~~~~~~p~l~~w~~~~~~ 87 (119)
.++..+++.+.++.||+.|++++||+|+++|.+|+.+++++.++... .++ ... ...++|+|.+|.+||.+
T Consensus 62 ~~~~~~~a~~~l~~l~~~L~~~~~~~Gd~~t~~D~~~~~~l~~~~~~-~~~~~~l~~-~~~~~pnL~~~~~ri~~ 134 (137)
T cd03212 62 EAEIYRDAKECLNLLSQRLGESQFFFGDTPTSLDALVFGYLAPLLKA-PLPNNKLQN-HLKQCPNLCRFCDRILS 134 (137)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcHHHHHHHHHHHHHHhc-cCCChHHHH-HHHHCcHHHHHHHHHHH
Confidence 45566778899999999998889999999999999976643333211 111 001 13689999999999975
No 61
>KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.74 E-value=3.9e-09 Score=75.11 Aligned_cols=100 Identities=19% Similarity=0.293 Sum_probs=72.5
Q ss_pred hHHHhh-chHHHHHHHHHHHHHHHHHHHHhcCCc--eecCCCCChhHHHHHH-HHHHHHHHHH-h--CccccCCCcCccH
Q 047906 6 WGVFIK-QGKEQEEAFAQVFENFSFLEEELKGKK--FFGGEKIGYADLALGW-IAERVFELEE-I--GVKVIEKEKFPLV 78 (119)
Q Consensus 6 ~~~~~~-~~~~~~~~~~~~~~~l~~le~~L~~~~--fl~G~~~t~aDi~l~~-~~~~~~~~~~-~--~~~~~~~~~~p~l 78 (119)
|++-++ +++..+...+++.+.|+.+|..|+++. |++|+++|-|||.+++ +.++=..+.+ + ....+ .+.||+|
T Consensus 190 Yk~GFA~~~e~Ye~~V~~lfe~LDr~E~vL~~~~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKCn~~~i-r~~Yp~l 268 (319)
T KOG2903|consen 190 YKCGFAEKQEAYEEEVNQLFEALDRCEDVLGKNRKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKCNKKTI-RDEYPNL 268 (319)
T ss_pred eeeccccccchHHHHHHHHHHHHHHHHHHHhcccceEeeccccchhheeeeeeEEeehhhhheeeecchhhh-hccCcHH
Confidence 455555 567788889999999999999997754 8999999999999876 4443222222 1 22233 5799999
Q ss_pred HHHHHHHhc-chhhhhcCCCHHHHHHHHH
Q 047906 79 SAWMQEFLK-VPVIKESLPPHEKLVTKMR 106 (119)
Q Consensus 79 ~~w~~~~~~-~p~v~~~~~~~~~~~~~~~ 106 (119)
..|..++-. .|++..+..-..-...|++
T Consensus 269 ~~~lk~iY~~~~~~~~Ttd~~hIk~~Y~~ 297 (319)
T KOG2903|consen 269 HNWLKNIYWNIPGFSSTTDFNHIKLHYYR 297 (319)
T ss_pred HHHHHHHHhhccchhhccchhHHhhhhcc
Confidence 999999997 9999988754333334444
No 62
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.73 E-value=3.7e-08 Score=66.69 Aligned_cols=71 Identities=23% Similarity=0.361 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHhcC--CceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhcchhhhhcCCC
Q 047906 21 AQVFENFSFLEEELKG--KKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLKVPVIKESLPP 97 (119)
Q Consensus 21 ~~~~~~l~~le~~L~~--~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~v~~~~~~ 97 (119)
.-+.++|..||+.|.. +.|-+||.+|+||+++.+...-+.++ .. +...||.+.+-.+.+.+.|+|+.+-|+
T Consensus 135 ~~ItkGF~ALEklL~~~aGkycvGDevtiADl~L~pqv~nA~rf---~v---dl~PYPti~ri~e~l~elpaFq~ahP~ 207 (217)
T KOG0868|consen 135 HFITKGFTALEKLLKSHAGKYCVGDEVTIADLCLPPQVYNANRF---HV---DLTPYPTITRINEELAELPAFQAAHPD 207 (217)
T ss_pred HHHHHhHHHHHHHHHHccCCcccCceeehhhhccchhhhhhhhc---cc---cCCcCchHHHHHHHHHhCHHHHhcCCC
Confidence 4478999999999964 78999999999999988755555444 32 468999999999999999999988765
No 63
>PLN02907 glutamate-tRNA ligase
Probab=98.61 E-value=1.2e-07 Score=76.56 Aligned_cols=66 Identities=12% Similarity=0.171 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhcchh
Q 047906 22 QVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLKVPV 90 (119)
Q Consensus 22 ~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~ 90 (119)
++...++.||..|++++||+|+++|+||+++++.+.++.. ...+.. ..+.||+|.+|+++|.++|+
T Consensus 94 ~l~~~L~~LE~~L~~rtYLvGd~lTLADIaL~~~L~~~~~-~~~~~~--~~~~yPnL~RW~erI~arPs 159 (722)
T PLN02907 94 EFENACEYVDGYLASRTFLVGYSLTIADIAIWSGLAGSGQ-RWESLR--KSKKYQNLVRWFNSISAEYS 159 (722)
T ss_pred HHHHHHHHHHHHhccCCeecCCCCCHHHHHHHHHHHhhhh-hhhccc--ccccCHHHHHHHHHHHhCCC
Confidence 4567789999999888999999999999996653322210 111211 14789999999999999999
No 64
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.60 E-value=1.4e-07 Score=65.67 Aligned_cols=70 Identities=31% Similarity=0.499 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHhc--CCceecCCCCChhHHHHHHHHHHHHHHHH-hCccccCCCcCccHHHHHHHHhcchhhhhcCC
Q 047906 22 QVFENFSFLEEELK--GKKFFGGEKIGYADLALGWIAERVFELEE-IGVKVIEKEKFPLVSAWMQEFLKVPVIKESLP 96 (119)
Q Consensus 22 ~~~~~l~~le~~L~--~~~fl~G~~~t~aDi~l~~~~~~~~~~~~-~~~~~~~~~~~p~l~~w~~~~~~~p~v~~~~~ 96 (119)
.....+..+++.|. +.+|++||++|+||+.++ .-+..+.. +..+. .+.+|+|.++.+++.++|.+++.+.
T Consensus 127 a~~~~~~~~~~~L~~~~sgflvGd~lT~aDl~i~---e~l~~l~~~~~~~~--~~~~P~L~a~~~kv~~~p~ik~~i~ 199 (206)
T KOG1695|consen 127 AKPKYFKILEKILKKNKSGFLVGDKLTWADLVIA---EHLDTLEELLDPSA--LDHFPKLKAFKERVSSIPNIKKYLE 199 (206)
T ss_pred chHHHHHHHHHHHHhCCCCeeecCcccHHHHHHH---HHHHHHHHhcCchh--hccChHHHHHHHHHhcCchHHHHHh
Confidence 45678888999886 357999999999999954 44544444 23332 4678999999999999999998654
No 65
>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]
Probab=97.38 E-value=0.00012 Score=52.60 Aligned_cols=66 Identities=20% Similarity=0.284 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhC--c-cccCCCcCccHHHHHHHHhc
Q 047906 19 AFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIG--V-KVIEKEKFPLVSAWMQEFLK 87 (119)
Q Consensus 19 ~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~--~-~~~~~~~~p~l~~w~~~~~~ 87 (119)
..+-+++-|+.++..|++++||.|+++|-+|+.++..+.-+-. + ++ . +.+ ..++|+|..|.+|+++
T Consensus 204 i~ell~rDlr~i~~~Lg~KkflfGdkit~~DatvFgqLa~v~Y-P-~~~~i~d~l-e~d~p~l~eYceRIr~ 272 (281)
T KOG4244|consen 204 IDELLHRDLRAISDYLGDKKFLFGDKITPADATVFGQLAQVYY-P-FRSHISDLL-EGDFPNLLEYCERIRK 272 (281)
T ss_pred HHHHHHHHHHHHHHHhCCCccccCCCCCcceeeehhhhhheec-c-CCCcHHHHH-hhhchHHHHHHHHHHH
Confidence 3445688999999999988999999999999986642222111 1 11 1 223 4789999999999987
No 66
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=97.22 E-value=0.00073 Score=44.03 Aligned_cols=67 Identities=21% Similarity=0.232 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhcchhhh
Q 047906 18 EAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLKVPVIK 92 (119)
Q Consensus 18 ~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~v~ 92 (119)
+...++...|..||..+...... ++++|+-||.++++++-+..++ |.. =-|++..|+++|.+...|.
T Consensus 59 ~~i~~l~~~L~~Le~ll~~~~~~-n~~LS~dDi~lFp~LR~Ltivk--gi~-----~P~~V~~Y~~~~s~~t~V~ 125 (132)
T PF04399_consen 59 ELIAELNADLEELEPLLASPNAV-NGELSIDDIILFPILRSLTIVK--GIQ-----WPPKVRAYMDRMSKATGVP 125 (132)
T ss_dssp HHHHHHHHHHHHHHHH-SCTTBT-TSS--HHHHHHHHHHHHHCTCT--TS--------HHHHHHHHHHHHHHT--
T ss_pred HHHHHHHHHHHHHHHHhcccccc-CCCCCHHHHHHHHHHhhhhhcc--CCc-----CCHHHHHHHHHHHHHcCCC
Confidence 34667788888898888653333 4499999999666555443222 432 2279999999999876653
No 67
>KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.21 E-value=0.00046 Score=48.09 Aligned_cols=74 Identities=15% Similarity=0.183 Sum_probs=51.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHH-HHHHHHH-HHHhCccccCCCcCccHHHHHHHHhc
Q 047906 13 GKEQEEAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGW-IAERVFE-LEEIGVKVIEKEKFPLVSAWMQEFLK 87 (119)
Q Consensus 13 ~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~-~~~~~~~-~~~~~~~~~~~~~~p~l~~w~~~~~~ 87 (119)
+...++..+++..+.+.|+.+|+.++||.|+.+|-+|..++. ++..+.+ ++.+...-+ ..+|++|.++..|+.+
T Consensus 172 ~~~~DqVie~vdkc~~aLsa~L~~q~yf~g~~P~elDAlvFGHlytilTt~Lpn~ela~~-lkkys~LlefcrrIeq 247 (257)
T KOG3027|consen 172 DKTMDQVIEQVDKCCRALSAQLGSQPYFTGDQPTELDALVFGHLYTILTTRLPNMELANI-LKKYSNLLEFCRRIEQ 247 (257)
T ss_pred cccHHHHHHHHHHHHHHHHHHhcCCCccCCCCccHHHHHHHhhhHHhhhhcCCcHHHHHH-HHHhHHHHHHHHHHHH
Confidence 334456678888999999999998999999999999999665 3332221 221111100 3688888888888765
No 68
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=96.91 E-value=0.0057 Score=38.84 Aligned_cols=69 Identities=17% Similarity=0.109 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHHHhcC-CceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhcchhhhhcC
Q 047906 18 EAFAQVFENFSFLEEELKG-KKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLKVPVIKESL 95 (119)
Q Consensus 18 ~~~~~~~~~l~~le~~L~~-~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~v~~~~ 95 (119)
.....+.+.+...+..|.+ ++|+.| ..|+||..+++++ .++...|.+ --+.+..|.++.-++|+|++.+
T Consensus 43 ~a~~~a~kL~~~a~~ll~~g~~~LFG-ewsIAD~dlA~ml---~Rl~~~gd~-----vP~~l~~Ya~~qwqrpsVQ~Wl 112 (117)
T PF14834_consen 43 AAQAAAQKLIAVAERLLADGGPNLFG-EWSIADADLALML---NRLVTYGDP-----VPERLADYAERQWQRPSVQRWL 112 (117)
T ss_dssp HHHHHHHHHHHHHHHHTTT--SSTTS-S--HHHHHHHHHH---HHHHTTT---------HHHHHHHHHHHT-HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCCCCccc-cchHHHHHHHHHH---HHHHHcCCC-----CCHHHHHHHHHHHCCHHHHHHH
Confidence 3455566667777777765 688888 6999999966644 444333432 2368999999999999998864
No 69
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=96.89 E-value=0.0044 Score=45.23 Aligned_cols=65 Identities=15% Similarity=0.243 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHHHh-cCCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhc
Q 047906 19 AFAQVFENFSFLEEEL-KGKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLK 87 (119)
Q Consensus 19 ~~~~~~~~l~~le~~L-~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~ 87 (119)
.++.+.+..+.--..| .+.+|++|+++++||++++.+++-+.++..+. ++ -.--+|..|+.+|+.
T Consensus 289 ~Re~lydA~d~Wvaalgknr~flGG~kPnLaDLsvfGvl~sm~gc~afk-d~---~q~t~I~eW~~rmea 354 (370)
T KOG3029|consen 289 EREHLYDAADQWVAALGKNRPFLGGKKPNLADLSVFGVLRSMEGCQAFK-DC---LQNTSIGEWYYRMEA 354 (370)
T ss_pred HHHHHHHHHHHHHHHhCCCCCccCCCCCchhhhhhhhhhhHhhhhhHHH-HH---HhcchHHHHHHHHHH
Confidence 3455555555555556 35799999999999999887777666654431 22 234689999999986
No 70
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=96.84 E-value=0.0055 Score=39.70 Aligned_cols=65 Identities=14% Similarity=0.140 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhcchhh
Q 047906 19 AFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLKVPVI 91 (119)
Q Consensus 19 ~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~v 91 (119)
..+++...|..++..+.... ..++.+|+-||.++++++-+..++ |..+ -|++..|+++|.+...|
T Consensus 61 ~i~~l~~~L~~l~~ll~~~~-~~n~~ls~DDi~lFp~LR~Lt~vk--gi~~-----P~~V~~Y~~~~s~~t~V 125 (128)
T cd03199 61 YIAALNALLEELDPLILSSE-AVNGQLSTDDIILFPILRNLTLVK--GLVF-----PPKVKAYLERMSALTKV 125 (128)
T ss_pred HHHHHHHHHHHHHHHHcCcc-ccCCcCCHHHHHHHHHHhhhhhhc--CCCC-----CHHHHHHHHHHHHHhCC
Confidence 34556677777777774323 346689999999777666554432 4321 27999999999986655
No 71
>KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.46 E-value=0.1 Score=38.55 Aligned_cols=68 Identities=16% Similarity=0.188 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhCcc---cc-CCCcCccHHHHHHHHhc
Q 047906 17 EEAFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIGVK---VI-EKEKFPLVSAWMQEFLK 87 (119)
Q Consensus 17 ~~~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~---~~-~~~~~p~l~~w~~~~~~ 87 (119)
........++++.|++.|+++.||.||++|-.|..++. ++.-+-....+ +. -....++|.++.+++.+
T Consensus 162 ~~i~~~Aska~~~LS~~Lgs~kffFgd~psslDa~lfs---~la~~~~~~Lp~~~Lq~~l~~~~NL~~~~~~i~s 233 (313)
T KOG3028|consen 162 DQIYKDASKALNLLSTLLGSKKFFFGDKPSSLDALLFS---YLAILLQVALPNDSLQVHLLAHKNLVRYVERIRS 233 (313)
T ss_pred HHHHHHHHHHHHHHHHHhcCceEeeCCCCchHHHHHHH---HHHHHHhccCCchhHHHHHHhcchHHHHHHHHHH
Confidence 34466678999999999998899999999999999664 33221111110 00 01338999999999876
No 72
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=89.29 E-value=1.8 Score=29.27 Aligned_cols=31 Identities=29% Similarity=0.281 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHhcCC---ceecCCC-CChhHHHHH
Q 047906 23 VFENFSFLEEELKGK---KFFGGEK-IGYADLALG 53 (119)
Q Consensus 23 ~~~~l~~le~~L~~~---~fl~G~~-~t~aDi~l~ 53 (119)
..++++.|++.|++. +|+.|+. +|-+|+.++
T Consensus 113 a~~~l~~L~~~L~~~~~~~~~f~~~~psslD~L~~ 147 (168)
T PF11801_consen 113 AMECLSLLEELLGEWEEARYFFGDSKPSSLDCLAF 147 (168)
T ss_pred HHHHHHHHHHHHhhccccccccCCCCCCHHHHHHH
Confidence 568888999999776 8888887 999999944
No 73
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=84.63 E-value=2.1 Score=29.56 Aligned_cols=64 Identities=9% Similarity=0.220 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCc-cHHHHHHHHhcchhhh
Q 047906 20 FAQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFP-LVSAWMQEFLKVPVIK 92 (119)
Q Consensus 20 ~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p-~l~~w~~~~~~~p~v~ 92 (119)
..++...++.+++.+.+.. -....+|+-||.++++++-+...+ |. .|| ++..|+.+|.+...|.
T Consensus 144 ~~~i~~dl~~l~~Li~~~s-~~n~~l~~ddi~vFplLRnlt~v~--gi------~wps~v~dy~~~msektqV~ 208 (215)
T COG2999 144 LKRIQADLRALDKLIVGPS-AVNGELSEDDILVFPLLRNLTLVA--GI------QWPSRVADYRDNMSEKTQVN 208 (215)
T ss_pred HHHHHHHHHHHHHHhcCcc-hhccccchhhhhhhHHhccceecc--cC------CCcHHHHHHHHHHHHhhCcc
Confidence 4556778888888875532 345579999999777655543222 32 334 8999999998866553
No 74
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=83.17 E-value=1.1 Score=35.94 Aligned_cols=59 Identities=19% Similarity=0.335 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhCccccC-CCcCccHHHHHH
Q 047906 21 AQVFENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIE-KEKFPLVSAWMQ 83 (119)
Q Consensus 21 ~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~-~~~~p~l~~w~~ 83 (119)
.++...+..++..|.-..|++|.++|+||++++ .-+..- .+....+. ...+.++.+|+.
T Consensus 91 ~~~s~~~~~ld~~l~~~t~lvg~sls~Ad~aiw---~~l~~n-~~~~~~lk~~k~~~~v~Rw~~ 150 (712)
T KOG1147|consen 91 DEISSSLSELDKFLVLRTFLVGNSLSIADFAIW---GALHSN-GMRQEQLKAKKDYQNVERWYD 150 (712)
T ss_pred HHHHHHHHHHHhhhhHHHHhhccchhHHHHHHH---HHHhcc-cchHHHHHhhCCchhhhhhcC
Confidence 345666777777775567999999999999944 333221 00011111 346778999987
No 75
>KOG1668 consensus Elongation factor 1 beta/delta chain [Transcription]
Probab=58.20 E-value=9.2 Score=27.29 Aligned_cols=59 Identities=14% Similarity=0.268 Sum_probs=42.2
Q ss_pred HHHHHHHHHHhcCCceecCCCCChhHHHHHHHHHHHHHHHHhCccccCCCcCccHHHHHHHHhcchhhh
Q 047906 24 FENFSFLEEELKGKKFFGGEKIGYADLALGWIAERVFELEEIGVKVIEKEKFPLVSAWMQEFLKVPVIK 92 (119)
Q Consensus 24 ~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~v~ 92 (119)
..++..++..|.+.+|..|..++-.|+.++ .-+ +... ....+++..+|+..+.+.-...
T Consensus 10 ~~glk~l~~sLA~ks~~~g~~~s~edv~vf---~al------~~ep-~s~~~v~~~~w~~~l~a~~~~~ 68 (231)
T KOG1668|consen 10 PAGLKKLNKSLAEKSYIEGYQLSKEDVVVF---AAL------GVEP-QSARLVNAERWYSKLEALLRLL 68 (231)
T ss_pred hhhhhhhhHhhhcccCCCCCCcccccceee---hhc------ccCc-chhhhhHHHHHHHHHHHHHHHH
Confidence 467788999998889999999999999833 222 2211 1457888899998887655443
No 76
>PF08020 DUF1706: Protein of unknown function (DUF1706) ; InterPro: IPR012550 This family contains many hypothetical proteins from bacteria and yeast.
Probab=40.90 E-value=1e+02 Score=20.78 Aligned_cols=46 Identities=20% Similarity=0.179 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHHHHHhc-------CCcee-cCCCCChhHHHHHHHHHHHHHH
Q 047906 16 QEEAFAQVFENFSFLEEELK-------GKKFF-GGEKIGYADLALGWIAERVFEL 62 (119)
Q Consensus 16 ~~~~~~~~~~~l~~le~~L~-------~~~fl-~G~~~t~aDi~l~~~~~~~~~~ 62 (119)
+++....+...+..|...++ +.++. +|..-|+.|+.+. ++.|...+
T Consensus 7 K~eLl~ai~~~~~kL~~~~~~ipee~~~~~~~~~~~d~~~~DvLay-l~gW~~Ll 60 (166)
T PF08020_consen 7 KAELLEAIEKNYEKLISEIDSIPEEQKDTPFDFGGRDRNPRDVLAY-LYGWHELL 60 (166)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHhcCccccccccCCHHHHHHH-HHHHHHHH
Confidence 34444444444444444432 23433 3678999999876 66676554
No 77
>PF10414 CysG_dimeriser: Sirohaem synthase dimerisation region; InterPro: IPR019478 Bacterial sulphur metabolism depends on the iron-containing porphinoid sirohaem. CysG is a multi-functional enzyme with S-adenosyl-L-methionine (SAM)-dependent bismethyltransferase, dehydrogenase and ferrochelatase activities. CysG synthesizes sirohaem from uroporphyrinogen III via reactions which encompass two branchpoint intermediates in tetrapyrrole biosynthesis, diverting flux first from protoporphyrin IX biosynthesis and then from cobalamin (vitamin B12) biosynthesis. CysG is a dimer. Its dimerisation region is 74 residues long, and acts to hold the two structurally similar protomers held together asymmetrically through a number of salt-bridges across complementary residues within the dimerisation region []. CysG dimerisation produces a series of active sites, accounting for CysG's multi-functionality, catalysing four diverse reactions: Two SAM-dependent methylations NAD+-dependent tetrapyrrole dehydrogenation Metal chelation ; GO: 0006779 porphyrin-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1PJT_A 1PJS_A 1PJQ_A.
Probab=28.12 E-value=1.1e+02 Score=16.56 Aligned_cols=22 Identities=14% Similarity=0.060 Sum_probs=10.7
Q ss_pred chhhhhcCCCHHHHHHHHHHHH
Q 047906 88 VPVIKESLPPHEKLVTKMRGIR 109 (119)
Q Consensus 88 ~p~v~~~~~~~~~~~~~~~~~~ 109 (119)
|+.|+..+|+...-..||....
T Consensus 14 R~~Vk~~l~~~~~RR~FWe~~~ 35 (60)
T PF10414_consen 14 RERVKQRLPDFAERRRFWERFF 35 (60)
T ss_dssp HHHHHHH-SSHHHHHHHHHHHT
T ss_pred HHHHHHHCCCchHHHHHHHHHH
Confidence 4555555665444444554443
No 78
>PRK08507 prephenate dehydrogenase; Validated
Probab=25.85 E-value=1.5e+02 Score=21.21 Aligned_cols=34 Identities=15% Similarity=0.495 Sum_probs=18.9
Q ss_pred chhhH-HHhhchHHHHHHHHHHHHHHHHHHHHhcC
Q 047906 3 PSIWG-VFIKQGKEQEEAFAQVFENFSFLEEELKG 36 (119)
Q Consensus 3 ~~~~~-~~~~~~~~~~~~~~~~~~~l~~le~~L~~ 36 (119)
|.+|+ |+.++.+...+..+++.+.|+.+.+.|.+
T Consensus 221 p~l~~~i~~~N~~~~~~~l~~~~~~l~~~~~~l~~ 255 (275)
T PRK08507 221 PAMWSDIFKQNKENVLEAIDEFIKELEQFKQLIEN 255 (275)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 45566 44444444445566666666666666643
No 79
>PRK15371 effector protein YopJ; Provisional
Probab=25.51 E-value=2.9e+02 Score=20.57 Aligned_cols=35 Identities=11% Similarity=0.159 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHHhcCCceecCCCCChhHHHHHH
Q 047906 19 AFAQVFENFSFLEEELKGKKFFGGEKIGYADLALGW 54 (119)
Q Consensus 19 ~~~~~~~~l~~le~~L~~~~fl~G~~~t~aDi~l~~ 54 (119)
..+++...+..||..++++.|+ .+.++..|+-..+
T Consensus 24 ~~~~L~~~i~~le~~~~~G~~~-~~~~~~~Di~~lp 58 (287)
T PRK15371 24 SNEELKNIITQLEDDIADGSWI-HKNYARTDLEVMP 58 (287)
T ss_pred hHHHHHHHHHHHHHHHHcCCCC-CchhHHhhHHhhH
Confidence 4677999999999999887777 6678999999555
No 80
>PF07181 VirC2: VirC2 protein; InterPro: IPR009841 This family consists of several VirC2 proteins which seem to be found exclusively in Agrobacterium species and Rhizobium etli. VirC2 is known to be involved in virulence in Agrobacterium species but its exact function is unclear [, ].; PDB: 2RH3_A.
Probab=25.11 E-value=1.7e+02 Score=20.33 Aligned_cols=41 Identities=15% Similarity=0.107 Sum_probs=24.1
Q ss_pred cchhhHHHhhchHHHHHHHHHHHHHHHHHHHHhcCCceecC
Q 047906 2 FPSIWGVFIKQGKEQEEAFAQVFENFSFLEEELKGKKFFGG 42 (119)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~fl~G 42 (119)
++.+|-.|.-+-.......--+.+.|..+|..|.+|.|-..
T Consensus 95 VS~~yD~Li~qys~sksLqmILrrAL~dfE~mL~dGsF~~~ 135 (202)
T PF07181_consen 95 VSKIYDALILQYSPSKSLQMILRRALDDFEAMLADGSFSKA 135 (202)
T ss_dssp S-HHHHHHTTTS-HHHHHHHHHHHHHHHHHHHHHTSGGGGS
T ss_pred ccHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHcCCccccc
Confidence 34566655443222223445578899999999977665433
No 81
>PF03791 KNOX2: KNOX2 domain ; InterPro: IPR005541 The MEINOX region is comprised of two domains, KNOX1 and KNOX2. KNOX1 plays a role in suppressing target gene expression. KNOX2, essential for function, is thought to be necessary for homo-dimerization [].; GO: 0003677 DNA binding, 0005634 nucleus
Probab=24.92 E-value=1.3e+02 Score=16.33 Aligned_cols=32 Identities=19% Similarity=0.334 Sum_probs=21.2
Q ss_pred hhhHHHhhchHHHHHHHHHHHHHHHHHHHHhc
Q 047906 4 SIWGVFIKQGKEQEEAFAQVFENFSFLEEELK 35 (119)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~ 35 (119)
+.+.+|..=.++.++...+....++.+|.+|.
T Consensus 17 aYc~~L~kykeeL~~p~~EA~~f~~~ie~qL~ 48 (52)
T PF03791_consen 17 AYCDMLVKYKEELQRPFQEAMEFCREIEQQLS 48 (52)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555455566677777778888888774
No 82
>PF10759 DUF2587: Protein of unknown function (DUF2587); InterPro: IPR019695 This entry represents proteins found Actinobacteria sp. The function is not known.
Probab=24.51 E-value=2.3e+02 Score=19.08 Aligned_cols=28 Identities=14% Similarity=0.049 Sum_probs=21.2
Q ss_pred CceecCCCCChhHHHHHH--HHHHHHHHHH
Q 047906 37 KKFFGGEKIGYADLALGW--IAERVFELEE 64 (119)
Q Consensus 37 ~~fl~G~~~t~aDi~l~~--~~~~~~~~~~ 64 (119)
-+|--+..+|=+.+-++- ++.|+..+.+
T Consensus 87 lPF~~~~~PSdaELRIAQAQLVGWLEGLFh 116 (169)
T PF10759_consen 87 LPFTEDSTPSDAELRIAQAQLVGWLEGLFH 116 (169)
T ss_pred CCCCCCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 377777789998887663 8899987643
No 83
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=24.12 E-value=1.8e+02 Score=21.76 Aligned_cols=41 Identities=24% Similarity=0.284 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHhcCC--ceecCCCCChhHHHHHHHHHHHHHHHHh
Q 047906 22 QVFENFSFLEEELKGK--KFFGGEKIGYADLALGWIAERVFELEEI 65 (119)
Q Consensus 22 ~~~~~l~~le~~L~~~--~fl~G~~~t~aDi~l~~~~~~~~~~~~~ 65 (119)
++...+..||..-..- .-..|.++|+||+. ++.....++..
T Consensus 73 ~L~~~~~~Le~ik~~~~~~~~~~~~vS~ADLi---vLaG~vAiE~a 115 (297)
T cd08200 73 ELAKVLAVLEGIQKEFNESQSGGKKVSLADLI---VLGGCAAVEKA 115 (297)
T ss_pred HHHHHHHHHHHHHHHhcccccCCccccHHHHH---HHHhHHHHHHH
Confidence 3556666666543321 11245689999998 44444444444
No 84
>COG3189 Uncharacterized conserved protein [Function unknown]
Probab=23.62 E-value=1.7e+02 Score=18.68 Aligned_cols=40 Identities=8% Similarity=0.118 Sum_probs=28.4
Q ss_pred cHHHHHHHHhcchhhhh-cCCCHHHHHHHHHHHHHHhhhcC
Q 047906 77 LVSAWMQEFLKVPVIKE-SLPPHEKLVTKMRGIREKYLGAA 116 (119)
Q Consensus 77 ~l~~w~~~~~~~p~v~~-~~~~~~~~~~~~~~~~~~~~~~~ 116 (119)
.+--|.+.+.=.+...+ ...++.+..+|-..+++++-++.
T Consensus 37 ~~D~W~KdiAPS~eLRkwf~Hdp~~w~~F~~rY~~EL~~~~ 77 (117)
T COG3189 37 ALDLWLKDIAPSTELRKWFHHDPKKWDEFRERYRAELNAQD 77 (117)
T ss_pred hHHHHHhhcCCCHHHHHHHcCCHHHHHHHHHHHHHHHhccc
Confidence 56667777776666666 35567888899999988885543
No 85
>PF02153 PDH: Prephenate dehydrogenase; InterPro: IPR003099 Members of this family are prephenate dehydrogenases 1.3.1.12 from EC involved in tyrosine biosynthesis. ; GO: 0004665 prephenate dehydrogenase (NADP+) activity, 0008977 prephenate dehydrogenase activity, 0006571 tyrosine biosynthetic process, 0055114 oxidation-reduction process; PDB: 2F1K_B 2PV7_A 3DZB_B 3KTD_B 3B1F_A 2G5C_D 3GGP_C 3GGG_C 3GGO_D.
Probab=23.28 E-value=1.9e+02 Score=20.53 Aligned_cols=33 Identities=24% Similarity=0.606 Sum_probs=17.6
Q ss_pred chhhH-HHhhchHHHHHHHHHHHHHHHHHHHHhc
Q 047906 3 PSIWG-VFIKQGKEQEEAFAQVFENFSFLEEELK 35 (119)
Q Consensus 3 ~~~~~-~~~~~~~~~~~~~~~~~~~l~~le~~L~ 35 (119)
|.+|+ ++..+++...+..+++.+.|+.+.+.|.
T Consensus 212 p~l~~~I~~~N~~~~~~~l~~~~~~L~~l~~~l~ 245 (258)
T PF02153_consen 212 PELWADIFLSNPENLLEALDEFIKELNELREALE 245 (258)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555 3334444344556666666666666554
No 86
>KOG4095 consensus Uncharacterized conserved protein (tumor-specific protein BCL7 in humans) [General function prediction only]
Probab=23.15 E-value=1.1e+02 Score=20.51 Aligned_cols=28 Identities=14% Similarity=0.179 Sum_probs=21.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcC-Ccee
Q 047906 13 GKEQEEAFAQVFENFSFLEEELKG-KKFF 40 (119)
Q Consensus 13 ~~~~~~~~~~~~~~l~~le~~L~~-~~fl 40 (119)
.+.+..+...|+++|+.||+.-.. +.|.
T Consensus 8 AETRsRAKDDIKkVMaaiEKVRrWEKKwV 36 (165)
T KOG4095|consen 8 AETRSRAKDDIKKVMAAIEKVRRWEKKWV 36 (165)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHhhheE
Confidence 445566788899999999998753 5676
No 87
>COG3253 ywfI Predicted heme peroxidase involved in anaerobic stress response [General function prediction only]
Probab=22.10 E-value=1.8e+02 Score=20.91 Aligned_cols=32 Identities=25% Similarity=0.534 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHh---cCCceecCCCCChhHHH
Q 047906 20 FAQVFENFSFLEEEL---KGKKFFGGEKIGYADLA 51 (119)
Q Consensus 20 ~~~~~~~l~~le~~L---~~~~fl~G~~~t~aDi~ 51 (119)
+.++-..|..-|... +.+|||+|..+.++|+.
T Consensus 192 ~v~lv~elR~~EAr~~~~~e~pff~G~~~~~~~l~ 226 (230)
T COG3253 192 WVDLVEELRFTEARKWIGEETPFFVGRRVPLEDLP 226 (230)
T ss_pred HHHHHHHHHHHHHHHHHhccCCeeeecccCHHHhh
Confidence 445555566555553 45899999999999986
No 88
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=21.57 E-value=2e+02 Score=20.61 Aligned_cols=34 Identities=15% Similarity=0.085 Sum_probs=19.8
Q ss_pred chhhH-HHhhchHHHHHHHHHHHHHHHHHHHHhcC
Q 047906 3 PSIWG-VFIKQGKEQEEAFAQVFENFSFLEEELKG 36 (119)
Q Consensus 3 ~~~~~-~~~~~~~~~~~~~~~~~~~l~~le~~L~~ 36 (119)
|.+|+ ++.++.+..-+..+++.+.|+.+-+.|.+
T Consensus 223 p~~w~~i~~~N~~~i~~~l~~~~~~l~~~~~~l~~ 257 (279)
T PRK07417 223 PELGVMMAEYNRAALLRSLASYRQSLDQLEELIEQ 257 (279)
T ss_pred hHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 55666 44444444445666666666666666644
No 89
>PF00392 GntR: Bacterial regulatory proteins, gntR family; InterPro: IPR000524 Many bacterial transcription regulation proteins bind DNA through a helix-turn-helix (HTH) motif, which can be classified into subfamilies on the basis of sequence similarities. The HTH GntR family has many members distributed among diverse bacterial groups that regulate various biological processes. It was named GntR after the Bacillus subtilis repressor of the gluconate operon []. Family members include GntR, HutC, KorA, NtaR, FadR, ExuR, FarR, DgoR and PhnF. The crystal structure of the FadR protein has been determined []. In general, these proteins contain a DNA-binding HTH domain at the N terminus, and an effector-binding or oligomerisation domain at the C terminus (IPR011711 from INTERPRO). The DNA-binding domain is well conserved in structure for the whole of the GntR family, consisting of a 3-helical bundle core with a small beta-sheet (wing); the GntR winged helix structure is similar to that found in several other transcriptional regulator families. The regions outside the DNA-binding domain are more variable and are consequently used to define GntR subfamilies []. This entry represents the N-terminal DNA-binding domain of the GntR family.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 1HW1_B 1H9T_A 1HW2_A 1H9G_A 1E2X_A 3IHU_A 3C7J_A 2RA5_A 3BY6_C 3IC7_A ....
Probab=21.42 E-value=1.1e+02 Score=16.56 Aligned_cols=25 Identities=16% Similarity=0.393 Sum_probs=15.4
Q ss_pred HHHHHHHhcCCceecCCCC-ChhHHH
Q 047906 27 FSFLEEELKGKKFFGGEKI-GYADLA 51 (119)
Q Consensus 27 l~~le~~L~~~~fl~G~~~-t~aDi~ 51 (119)
.+.|.+.+..+.|-.|+.+ |..+++
T Consensus 6 ~~~l~~~I~~g~~~~g~~lps~~~la 31 (64)
T PF00392_consen 6 YDQLRQAILSGRLPPGDRLPSERELA 31 (64)
T ss_dssp HHHHHHHHHTTSS-TTSBE--HHHHH
T ss_pred HHHHHHHHHcCCCCCCCEeCCHHHHH
Confidence 3445555555667788887 888876
Done!