BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>047910
MEALRQQISAMRQSFFDEDILDTHIFQLEQVEHISDPSLFEDFVNVYLRDSTKTLAIIEE
EIANNPVNYMDLDKYFHQLKSSSNCIGANKVVNEAKKAIELCKEENLEAAKASFEKMKVE
HTTLKTKLQAYLEVK

High Scoring Gene Products

Symbol, full name Information P value
AHP1
AT3G21510
protein from Arabidopsis thaliana 7.9e-14
AHP5
AT1G03430
protein from Arabidopsis thaliana 6.6e-10
AT5G19710 protein from Arabidopsis thaliana 1.8e-09
AHP2
AT3G29350
protein from Arabidopsis thaliana 1.8e-09
AHP3
AT5G39340
protein from Arabidopsis thaliana 2.0e-08
HP6
histidine phosphotransfer protein 6
protein from Arabidopsis thaliana 1.8e-07

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  047910
        (135 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2089900 - symbol:AHP1 "histidine-containing ph...   179  7.9e-14   1
TAIR|locus:2020868 - symbol:AHP5 "histidine-containing ph...   142  6.6e-10   1
TAIR|locus:2183184 - symbol:AT5G19710 "AT5G19710" species...    96  1.8e-09   2
TAIR|locus:2093817 - symbol:AHP2 "histidine-containing ph...   138  1.8e-09   1
TAIR|locus:2175643 - symbol:AHP3 "histidine-containing ph...   128  2.0e-08   1
TAIR|locus:2016339 - symbol:HP6 "histidine phosphotransfe...   119  1.8e-07   1


>TAIR|locus:2089900 [details] [associations]
            symbol:AHP1 "histidine-containing phosphotransmitter 1"
            species:3702 "Arabidopsis thaliana" [GO:0000160 "phosphorelay
            signal transduction system" evidence=IEA;IMP] [GO:0004871 "signal
            transducer activity" evidence=IEA] [GO:0009927 "histidine
            phosphotransfer kinase activity" evidence=ISS;IDA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0043424 "protein histidine
            kinase binding" evidence=IPI] [GO:0005737 "cytoplasm"
            evidence=IDA;NAS] [GO:0009736 "cytokinin mediated signaling
            pathway" evidence=RCA;IMP;TAS] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0080036 "regulation of cytokinin mediated signaling pathway"
            evidence=IGI] [GO:0009553 "embryo sac development" evidence=IGI]
            [GO:0016049 "cell growth" evidence=IGI] [GO:0051301 "cell division"
            evidence=IGI] [GO:0000041 "transition metal ion transport"
            evidence=RCA] [GO:0010029 "regulation of seed germination"
            evidence=RCA] [GO:0015698 "inorganic anion transport" evidence=RCA]
            [GO:0031537 "regulation of anthocyanin metabolic process"
            evidence=RCA] [GO:0048831 "regulation of shoot system development"
            evidence=RCA] InterPro:IPR008207 Pfam:PF01627 PROSITE:PS50894
            SMART:SM00073 GO:GO:0005829 GO:GO:0005634 GO:GO:0005737
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006950 EMBL:AB019232
            GO:GO:0051301 GO:GO:0016049 GO:GO:0009736 GO:GO:0009927
            GO:GO:0000160 EMBL:AB012570 EMBL:AB015141 EMBL:AF370265
            EMBL:AY063082 IPI:IPI00547967 RefSeq:NP_188788.1 UniGene:At.24157
            ProteinModelPortal:Q9ZNV9 SMR:Q9ZNV9 IntAct:Q9ZNV9 STRING:Q9ZNV9
            PaxDb:Q9ZNV9 PRIDE:Q9ZNV9 DNASU:821705 EnsemblPlants:AT3G21510.1
            GeneID:821705 KEGG:ath:AT3G21510 GeneFarm:3812 TAIR:At3g21510
            eggNOG:NOG275839 HOGENOM:HOG000272680 InParanoid:Q9ZNV9 KO:K14490
            OMA:IGAQRVK PhylomeDB:Q9ZNV9 ProtClustDB:CLSN2915741
            Genevestigator:Q9ZNV9 GermOnline:AT3G21510 GO:GO:0009553
            GO:GO:0080036 Gene3D:1.20.120.160 SUPFAM:SSF47226 Uniprot:Q9ZNV9
        Length = 154

 Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
 Identities = 39/137 (28%), Positives = 75/137 (54%)

Query:     1 MEALRQQISAM--RQSFFDEDILDTHIFQLEQVEHISDPSLFEDFVNVYLRDSTKTLAII 58
             M+ +++Q S     +S F E ILD+   QL+Q++  S+P      V ++ +DS + L  +
Sbjct:     1 MDLVQKQKSLQDYTKSLFLEGILDSQFLQLQQLQDESNPDFVSQVVTLFFQDSDRILNDL 60

Query:    59 EEEIANNPVNYMDLDKYFHQLKSSSNCIGANKVVNEAKKAIELCKEENLEAAKASFEKMK 118
                +    V++  +D + HQLK SS+ IGA +V N        C+++N+EA     +++K
Sbjct:    61 SLSLDQQVVDFKKVDPHVHQLKGSSSSIGAQRVKNACVVFRSFCEQQNVEACHRCLQQVK 120

Query:   119 VEHTTLKTKLQAYLEVK 135
              E+  +K +L+   +++
Sbjct:   121 QEYYLVKNRLETLFKLE 137


>TAIR|locus:2020868 [details] [associations]
            symbol:AHP5 "histidine-containing phosphotransfer factor
            5" species:3702 "Arabidopsis thaliana" [GO:0000160 "phosphorelay
            signal transduction system" evidence=IEA;TAS] [GO:0004871 "signal
            transducer activity" evidence=IEA] [GO:0009927 "histidine
            phosphotransfer kinase activity" evidence=ISS;IDA] [GO:0043424
            "protein histidine kinase binding" evidence=IPI] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0009736 "cytokinin mediated signaling pathway"
            evidence=RCA;IMP] [GO:0080036 "regulation of cytokinin mediated
            signaling pathway" evidence=IGI] [GO:0000165 "MAPK cascade"
            evidence=RCA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
            membrane" evidence=RCA] [GO:0009617 "response to bacterium"
            evidence=RCA] [GO:0009862 "systemic acquired resistance, salicylic
            acid mediated signaling pathway" evidence=RCA] [GO:0009863
            "salicylic acid mediated signaling pathway" evidence=RCA]
            [GO:0009867 "jasmonic acid mediated signaling pathway"
            evidence=RCA] [GO:0010029 "regulation of seed germination"
            evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
            metabolic process" evidence=RCA] [GO:0010363 "regulation of
            plant-type hypersensitive response" evidence=RCA] [GO:0031348
            "negative regulation of defense response" evidence=RCA] [GO:0031537
            "regulation of anthocyanin metabolic process" evidence=RCA]
            [GO:0035304 "regulation of protein dephosphorylation" evidence=RCA]
            [GO:0043069 "negative regulation of programmed cell death"
            evidence=RCA] [GO:0048831 "regulation of shoot system development"
            evidence=RCA] [GO:0051707 "response to other organism"
            evidence=RCA] InterPro:IPR008207 Pfam:PF01627 PROSITE:PS50894
            SMART:SM00073 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
            GO:GO:0005634 GO:GO:0005737 EMBL:AC002560 GO:GO:0009736
            GO:GO:0009927 GO:GO:0000160 eggNOG:NOG275839 HOGENOM:HOG000272680
            KO:K14490 GO:GO:0080036 Gene3D:1.20.120.160 SUPFAM:SSF47226
            ProtClustDB:CLSN2684116 EMBL:AB041767 EMBL:AY088228 IPI:IPI00531844
            RefSeq:NP_563684.1 UniGene:At.1207 ProteinModelPortal:Q8L9T7
            SMR:Q8L9T7 IntAct:Q8L9T7 STRING:Q8L9T7 EnsemblPlants:AT1G03430.1
            GeneID:839506 KEGG:ath:AT1G03430 GeneFarm:3822 TAIR:At1g03430
            InParanoid:Q8L9T7 OMA:CISFKEC PhylomeDB:Q8L9T7
            Genevestigator:Q8L9T7 GermOnline:AT1G03430 Uniprot:Q8L9T7
        Length = 157

 Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 37/129 (28%), Positives = 63/129 (48%)

Query:     4 LRQQISAMRQSFFDEDILDTHIFQLEQVEHISDPSLFEDFVNVYLRDSTK---TLAIIEE 60
             L++Q      S + +  LD    +L +++    P    + V+++  D +K   T++I  E
Sbjct:     9 LQRQFQDYIVSLYQQGFLDNQFSELRKLQDEGTPDFVAEVVSLFFDDCSKLINTMSISLE 68

Query:    61 EIANNPVNYMDLDKYFHQLKSSSNCIGANKVVNEAKKAIELCKEENLEAAKASFEKMKVE 120
                N  V++  +D   HQLK SS+ +GA +V N      E C  +N E      +++  E
Sbjct:    69 RPDN--VDFKQVDSGVHQLKGSSSSVGARRVKNVCISFKECCDVQNREGCLRCLQQVDYE 126

Query:   121 HTTLKTKLQ 129
             +  LKTKLQ
Sbjct:   127 YKMLKTKLQ 135


>TAIR|locus:2183184 [details] [associations]
            symbol:AT5G19710 "AT5G19710" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR008207 EMBL:CP002688 GO:GO:0004871
            GO:GO:0000160 SUPFAM:SSF47226 IPI:IPI00527807 RefSeq:NP_197472.1
            UniGene:At.54920 ProteinModelPortal:F4K2L3 SMR:F4K2L3
            EnsemblPlants:AT5G19710.1 GeneID:832091 KEGG:ath:AT5G19710
            OMA:QASYNIF PhylomeDB:F4K2L3 Uniprot:F4K2L3
        Length = 114

 Score = 96 (38.9 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
 Identities = 20/49 (40%), Positives = 28/49 (57%)

Query:    86 IGANKVVNEAKKAIELCKEENLEAAKASFEKMKVEHTTLKTKLQAYLEV 134
             IGA KVV E KKA    K  N+E  K +   +K EH+ L+ K + Y ++
Sbjct:    52 IGAIKVVKELKKANTFLKAGNIEGVKGALPDIKKEHSELRAKFETYFQL 100

 Score = 54 (24.1 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
 Identities = 10/18 (55%), Positives = 14/18 (77%)

Query:     1 MEALRQQISAMRQSFFDE 18
             +++L  Q+  MRQSFFDE
Sbjct:     3 IKSLHVQVEEMRQSFFDE 20


>TAIR|locus:2093817 [details] [associations]
            symbol:AHP2 "histidine-containing phosphotransmitter 2"
            species:3702 "Arabidopsis thaliana" [GO:0000160 "phosphorelay
            signal transduction system" evidence=IEA;IDA] [GO:0004871 "signal
            transducer activity" evidence=IEA;ISS] [GO:0007165 "signal
            transduction" evidence=ISS] [GO:0009927 "histidine phosphotransfer
            kinase activity" evidence=ISS;IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0043424 "protein histidine kinase binding"
            evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA;NAS] [GO:0009736
            "cytokinin mediated signaling pathway" evidence=RCA;IMP;TAS]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0080036 "regulation of
            cytokinin mediated signaling pathway" evidence=IGI] [GO:0005829
            "cytosol" evidence=IDA] [GO:0010029 "regulation of seed
            germination" evidence=RCA] [GO:0031537 "regulation of anthocyanin
            metabolic process" evidence=RCA] [GO:0048831 "regulation of shoot
            system development" evidence=RCA] InterPro:IPR008207 Pfam:PF01627
            PROSITE:PS50894 SMART:SM00073 GO:GO:0005829 GO:GO:0005634
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006950 GO:GO:0009736
            GO:GO:0009927 GO:GO:0000160 HOGENOM:HOG000272680 KO:K14490
            GO:GO:0080036 Gene3D:1.20.120.160 SUPFAM:SSF47226 EMBL:AB012568
            EMBL:AB015142 EMBL:AP001309 EMBL:AY064148 EMBL:AY097403
            IPI:IPI00543858 IPI:IPI00548739 RefSeq:NP_189581.1
            RefSeq:NP_850649.1 UniGene:At.22337 ProteinModelPortal:Q9ZNV8
            SMR:Q9ZNV8 IntAct:Q9ZNV8 STRING:Q9ZNV8 PaxDb:Q9ZNV8 PRIDE:Q9ZNV8
            DNASU:822593 EnsemblPlants:AT3G29350.1 GeneID:822593
            KEGG:ath:AT3G29350 GeneFarm:3816 TAIR:At3g29350 eggNOG:NOG259404
            InParanoid:Q9ZNV8 OMA:CEAKNYE PhylomeDB:Q9ZNV8
            ProtClustDB:CLSN2684116 Genevestigator:Q9ZNV8 GermOnline:AT3G29350
            Uniprot:Q9ZNV8
        Length = 156

 Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 30/127 (23%), Positives = 61/127 (48%)

Query:     4 LRQQISAMRQSFFDEDILDTHIFQLEQVEHISDPSLFEDFVNVYLRDSTKTLAIIEEEI- 62
             L++Q      S + +  LD    +L++++    P    + ++++  D  K ++ +   + 
Sbjct:     8 LQRQFRDYTISLYQQGFLDDQFTELKKLQDDGSPDFVSEVLSLFFEDCVKLISNMARALD 67

Query:    63 ANNPVNYMDLDKYFHQLKSSSNCIGANKVVNEAKKAIELCKEENLEAAKASFEKMKVEHT 122
                 V++  +    HQLK SS+ +GA +V        E C+ +N E      +++ +E+ 
Sbjct:    68 TTGTVDFSQVGASVHQLKGSSSSVGAKRVKTLCVSFKECCEAKNYEGCVRCLQQVDIEYK 127

Query:   123 TLKTKLQ 129
              LKTKLQ
Sbjct:   128 ALKTKLQ 134


>TAIR|locus:2175643 [details] [associations]
            symbol:AHP3 "histidine-containing phosphotransmitter 3"
            species:3702 "Arabidopsis thaliana" [GO:0000160 "phosphorelay
            signal transduction system" evidence=IEA;ISS] [GO:0004871 "signal
            transducer activity" evidence=IEA] [GO:0009927 "histidine
            phosphotransfer kinase activity" evidence=ISS;IDA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0043424 "protein histidine
            kinase binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0009736 "cytokinin
            mediated signaling pathway" evidence=RCA;IMP] [GO:0080036
            "regulation of cytokinin mediated signaling pathway" evidence=IGI]
            [GO:0010029 "regulation of seed germination" evidence=RCA]
            [GO:0031537 "regulation of anthocyanin metabolic process"
            evidence=RCA] [GO:0048831 "regulation of shoot system development"
            evidence=RCA] InterPro:IPR008207 Pfam:PF01627 PROSITE:PS50894
            SMART:SM00073 GO:GO:0005829 GO:GO:0005634 GO:GO:0005737
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006950 GO:GO:0009736
            GO:GO:0009927 GO:GO:0000160 HOGENOM:HOG000272680 KO:K14490
            GO:GO:0080036 Gene3D:1.20.120.160 SUPFAM:SSF47226
            ProtClustDB:CLSN2684116 EMBL:AB012569 EMBL:AB015143 EMBL:AB009054
            EMBL:AY050944 EMBL:AY091174 IPI:IPI00548925 RefSeq:NP_198750.1
            UniGene:At.25339 ProteinModelPortal:Q9SAZ5 SMR:Q9SAZ5 IntAct:Q9SAZ5
            STRING:Q9SAZ5 PaxDb:Q9SAZ5 PRIDE:Q9SAZ5 EnsemblPlants:AT5G39340.1
            GeneID:833930 KEGG:ath:AT5G39340 GeneFarm:3819 TAIR:At5g39340
            eggNOG:KOG4747 InParanoid:Q9SAZ5 OMA:RIPQVDI PhylomeDB:Q9SAZ5
            Genevestigator:Q9SAZ5 GermOnline:AT5G39340 Uniprot:Q9SAZ5
        Length = 155

 Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 29/117 (24%), Positives = 55/117 (47%)

Query:    14 SFFDEDILDTHIFQLEQVEHISDPSLFEDFVNVYLRDSTKTLAIIEEEI-ANNPVNYMDL 72
             S + +  LD    +L++++    P    + V ++  D  K ++ +   +     V++  +
Sbjct:    18 SLYHQGFLDDQFTELKKLQDECSPDFVAEVVTLFFEDCEKLISNMARALDQTGNVDFKLV 77

Query:    73 DKYFHQLKSSSNCIGANKVVNEAKKAIELCKEENLEAAKASFEKMKVEHTTLKTKLQ 129
                 HQLK SS+ +GA +V        E C  +N E      +++ +E+ TLK KLQ
Sbjct:    78 GSSVHQLKGSSSSVGAKRVKGLCVTLKECCDSQNYEGCVRCLQQVDIEYKTLKAKLQ 134


>TAIR|locus:2016339 [details] [associations]
            symbol:HP6 "histidine phosphotransfer protein 6"
            species:3702 "Arabidopsis thaliana" [GO:0000160 "phosphorelay
            signal transduction system" evidence=IEA;IDA] [GO:0004871 "signal
            transducer activity" evidence=IEA] [GO:0005739 "mitochondrion"
            evidence=ISM] [GO:0016772 "transferase activity, transferring
            phosphorus-containing groups" evidence=ISS] [GO:0009735 "response
            to cytokinin stimulus" evidence=IEP] [GO:0009736 "cytokinin
            mediated signaling pathway" evidence=IMP] [GO:0009927 "histidine
            phosphotransfer kinase activity" evidence=IDA] [GO:0010089 "xylem
            development" evidence=IMP] InterPro:IPR008207 Pfam:PF01627
            PROSITE:PS50894 EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0004871
            GO:GO:0009736 GO:GO:0000160 HOGENOM:HOG000272680 KO:K14490
            Gene3D:1.20.120.160 SUPFAM:SSF47226 EMBL:DQ093643 EMBL:AC009322
            IPI:IPI00543860 PIR:E96832 RefSeq:NP_178127.2 UniGene:At.52576
            ProteinModelPortal:Q9SSC9 SMR:Q9SSC9 STRING:Q9SSC9
            EnsemblPlants:AT1G80100.1 GeneID:844350 KEGG:ath:AT1G80100
            GeneFarm:3823 TAIR:At1g80100 eggNOG:NOG329115 InParanoid:Q9SSC9
            OMA:DETSPNF PhylomeDB:Q9SSC9 ProtClustDB:CLSN2708462
            Genevestigator:Q9SSC9 GermOnline:AT1G80100 GO:GO:0010089
            Uniprot:Q9SSC9
        Length = 154

 Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 31/136 (22%), Positives = 63/136 (46%)

Query:     1 MEALRQQISAMRQSFFDEDILDTHIFQLEQVEHISDPSLFEDFVNVYLRDSTKTLAIIEE 60
             ++ L+  I+ +  S F + +LD    QL+Q++  + P+   D +N+Y  +S K L  +  
Sbjct:     6 VDRLQADINRLLASLFHQGVLDEQFLQLQQLQDETSPNFVYDVINIYFDESEKLLRNLRL 65

Query:    61 EIANNPVN-YMDLDKYFHQLKSSSNCIGANKVVNEAKKAIELCKEENLEAAKASFEKMKV 119
              + +   + Y  +  + +QL  SS+ IGA +V N         +  N        E ++ 
Sbjct:    66 LLMDREFSDYKKIGLHLNQLVGSSSSIGARRVRNVCVAFRSASELSNRPGCLRGLEVVEH 125

Query:   120 EHTTLKTKLQAYLEVK 135
             E+  LK  +    +++
Sbjct:   126 EYHYLKNMMHELFQLE 141


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.129   0.347    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      135       135   0.00091  102 3  10 22  0.43    31
                                                     30  0.44    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  573 (61 KB)
  Total size of DFA:  167 KB (2099 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.32u 0.13s 22.45t   Elapsed:  00:00:01
  Total cpu time:  22.32u 0.13s 22.45t   Elapsed:  00:00:01
  Start:  Fri May 10 00:27:11 2013   End:  Fri May 10 00:27:12 2013

Back to top