BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047922
(478 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1SNZ|A Chain A, Crystal Structure Of Apo Human Galactose Mutarotase
pdb|1SNZ|B Chain B, Crystal Structure Of Apo Human Galactose Mutarotase
pdb|1SO0|A Chain A, Crystal Structure Of Human Galactose Mutarotase Complexed
With Galactose
pdb|1SO0|B Chain B, Crystal Structure Of Human Galactose Mutarotase Complexed
With Galactose
pdb|1SO0|C Chain C, Crystal Structure Of Human Galactose Mutarotase Complexed
With Galactose
pdb|1SO0|D Chain D, Crystal Structure Of Human Galactose Mutarotase Complexed
With Galactose
Length = 344
Score = 194 bits (493), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 121/318 (38%), Positives = 172/318 (54%), Gaps = 20/318 (6%)
Query: 10 VKFYELKKGDFSVKFTNWGATIVSVFLPXXXXXXXXXXXXXXSVDDYKNDTTYFGSVVGR 69
V+ ++L+ V +WG TI ++ + ++ Y YFG+V+GR
Sbjct: 21 VEKFQLQSDLLRVDIISWGCTITALEVKDRQGRASDVVLGFAELEGYLQKQPYFGAVIGR 80
Query: 70 VANRIGGAQFTLDGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHS 129
VANRI F +DG Y L N++ N LHGG +GF V+W + N + FS S
Sbjct: 81 VANRIAKGTFKVDGKEYHLAINKEPNSLHGGVRGFDKVLWTPRVLSN-----GVQFSRIS 135
Query: 130 TDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKARNKATPVNLAQHSYWNLGGHSSGDILS 189
DGEEG+PG+L V V+Y+L EL V +A+A ++ATPVNL HSY+NL G +S +I
Sbjct: 136 PDGEEGYPGELKVWVTYTLDG-GELIVNYRAQA-SQATPVNLTNHSYFNLAGQASPNIND 193
Query: 190 QEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSI-DKLPGGYDINYVLDKD 248
EV I A +Y PVD+ LIPTG++ V+GT +D +P +G + D G+D N+ L
Sbjct: 194 HEVTIEADTYLPVDETLIPTGEVAPVQGTAFDLRKPVELGKHLQDFHLNGFDHNFCL--- 250
Query: 249 DSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLA 308
SK+ A VH SGRV+E+ QPGVQ+YTG + L K +N A
Sbjct: 251 KGSKEKHFCARVHHAASGRVLEVYTTQPGVQFYTGNFLDGTL------KGKNGAV---YP 301
Query: 309 QHSYWNLGGHNSGDILSQ 326
+HS + L N D ++Q
Sbjct: 302 KHSGFCLETQNWPDAVNQ 319
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 120/190 (63%), Gaps = 6/190 (3%)
Query: 289 ELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKI 348
EL V +A+A ++ATPVNL HSY+NL G S +I EV I A +Y PVD+ LIPTG++
Sbjct: 158 ELIVNYRAQA-SQATPVNLTNHSYFNLAGQASPNINDHEVTIEADTYLPVDETLIPTGEV 216
Query: 349 ETVEGTPYDFLQPHAIGSSIDKLPV-GYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMEL 407
V+GT +D +P +G + + G+D N+ L SK+ A VH SGRV+E+
Sbjct: 217 APVQGTAFDLRKPVELGKHLQDFHLNGFDHNFCL---KGSKEKHFCARVHHAASGRVLEV 273
Query: 408 LADQPGVQYYTGGQIK-EVRGKGGFVYKKHAGLCLETQAFPDSVNHPNFPNTIVYPGEKY 466
QPGVQ+YTG + ++GK G VY KH+G CLETQ +PD+VN P FP ++ PGE+Y
Sbjct: 274 YTTQPGVQFYTGNFLDGTLKGKNGAVYPKHSGFCLETQNWPDAVNQPRFPPVLLRPGEEY 333
Query: 467 KHHMLYKFST 476
H +KFS
Sbjct: 334 DHTTWFKFSV 343
>pdb|1LUR|A Chain A, Crystal Structure Of The GalmALDOSE EPIMERASE HOMOLOGUE
From C. Elegans, Northeast Structural Genomics Target
Wr66
pdb|1LUR|B Chain B, Crystal Structure Of The GalmALDOSE EPIMERASE HOMOLOGUE
From C. Elegans, Northeast Structural Genomics Target
Wr66
Length = 339
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 99/223 (44%), Gaps = 13/223 (5%)
Query: 27 WGATIVSVFLPXXXXXXXXXXXXXXSVDDYKNDTTYFGSVVGRVANRIGGAQFTLDGTHY 86
+GAT+ + P ++D+++ D G VGRVANRI + DG Y
Sbjct: 30 FGATLAKLTFPDKNGKNQDLVLGFDTIDEFEKDAASIGKTVGRVANRIKNSTLHFDGKQY 89
Query: 87 KLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHSTDGEEGFPGDLDVTVSY 146
N + LHGGP G W+V + E + FS + + ++G PGD + V+Y
Sbjct: 90 TXTPNNGPHYLHGGPNGLGYRKWEVVRHAPE----SVSFSVRANEQDDGLPGDAKIDVTY 145
Query: 147 SLTSEKELSVKMKAKARNKATPVNLAQHSYWNLGGHSSGDILSQEVQIFASSYTPVDDQL 206
++ +L ++ A + L H+YWNL G S + ++ A + VDD
Sbjct: 146 TVNDRNQLIIEHHATCDTPGL-LALTNHAYWNLDG--SDTVAEHFLEXEADEFVEVDDTF 202
Query: 207 IPTGKIETVEGTPYDFLQPHTIGSSIDKLPGGYDINYVLDKDD 249
PTG I +V T +DF + S G D +LD D+
Sbjct: 203 CPTGAIRSVTDTGFDFRSGKQLKES------GKDAEELLDLDN 239
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 77/177 (43%), Gaps = 17/177 (9%)
Query: 307 LAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGS 366
L H+YWNL G ++ + ++ A + VDD PTG I +V T +DF +
Sbjct: 169 LTNHAYWNLDGSDT--VAEHFLEXEADEFVEVDDTFCPTGAIRSVTDTGFDFRSGKQLKE 226
Query: 367 SIDKLPVGYDINYVLDKDDSSKKMRKVA--------IVHDKKSGRVMELLADQPGVQYYT 418
S G D +LD D+ +K +KSG + + P + Y
Sbjct: 227 S------GKDAEELLDLDNDLVITKKTPPSTPSTYLRFWSEKSGIELSITTSYPVIHLY- 279
Query: 419 GGQIKEVRGKGGFVYKKHAGLCLETQAFPDSVNHPNFPNTIVYPGEKYKHHMLYKFS 475
+ + +GK G YK + L +E Q + N +FP+ + PG+ Y ++Y FS
Sbjct: 280 ASKFLDCKGKKGEHYKANKALAIEPQFHSAAPNFDHFPDVSLRPGDHYCQEIVYTFS 336
>pdb|1Z45|A Chain A, Crystal Structure Of The Gal10 Fusion Protein Galactose
MutarotaseUDP-Galactose 4-Epimerase From Saccharomyces
Cerevisiae Complexed With Nad, Udp-Glucose, And
Galactose
Length = 699
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 130/290 (44%), Gaps = 27/290 (9%)
Query: 9 EVKFYELKKGD-FSVKFTNWGATIVSVFLPXXXXXXXXXXXXXXSVDDYKN-DTTYFGSV 66
+ +F + G F F N GA+IV + + + Y N D+ Y G+
Sbjct: 372 DARFVTIGAGTRFQATFANLGASIVDL-----KVNGQSVVLGYENEEGYLNPDSAYIGAT 426
Query: 67 VGRVANRIGGAQFTLDGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFS 126
+GR ANRI +F+L Y+L N N H F + +N K VF+
Sbjct: 427 IGRYANRISKGKFSLCNKDYQLTVNNGVNANHSSIGSFHRKRFLGPIIQNPS---KDVFT 483
Query: 127 --YHSTDGEEG--FPGDLDVTVSYSL-TSEKELSVKMKAK-ARNKATPVNLAQHSYWNLG 180
Y D E+ FPGDL VT+ Y++ ++K L + K K +ATP+NL HSY+NL
Sbjct: 484 AEYMLIDNEKDTEFPGDLLVTIQYTVNVAQKSLEIVYKGKLTAGEATPINLTNHSYFNLN 543
Query: 181 GHSSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPGGYD 240
I E+ + + VD +IPTG I E ++ +P +G K P +D
Sbjct: 544 KPYGDTIEGTEIMVRSKKSVDVDKNMIPTGNIVDREIATFNSTKPTVLGP---KNP-QFD 599
Query: 241 INYVLDKDDS-------SKKMRKVAIVHDKKSGRVMELLADQPGVQYYTG 283
+V+D++ + ++ + S +E+L+ +P Q+YTG
Sbjct: 600 CCFVVDENAKPSQINTLNNELTLIVKAFHPDSNITLEVLSTEPTYQFYTG 649
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 281 YTGGQIKEELSVKMKAK-ARNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVD 339
YT ++ L + K K +ATP+NL HSY+NL I E+ + + VD
Sbjct: 507 YTVNVAQKSLEIVYKGKLTAGEATPINLTNHSYFNLNKPYGDTIEGTEIMVRSKKSVDVD 566
Query: 340 DQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDS-------SKKMRK 392
+IPTG I E ++ +P +G K P +D +V+D++ + ++
Sbjct: 567 KNMIPTGNIVDREIATFNSTKPTVLGP---KNP-QFDCCFVVDENAKPSQINTLNNELTL 622
Query: 393 VAIVHDKKSGRVMELLADQPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQAFPDSVNH 452
+ S +E+L+ +P Q+YTG + G Y+ G +E + D++N
Sbjct: 623 IVKAFHPDSNITLEVLSTEPTYQFYTG----DFLSAG---YEARQGFAIEPGRYIDAINQ 675
Query: 453 PNFPNTIVYP-GEKYKHHMLYKFS 475
N+ + + GE Y ++Y+FS
Sbjct: 676 ENWKDCVTLKNGETYGSKIVYRFS 699
>pdb|1YGA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Yn9a
Protein, New York Structural Genomics Consortium
pdb|1YGA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae Yn9a
Protein, New York Structural Genomics Consortium
Length = 342
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 111/251 (44%), Gaps = 20/251 (7%)
Query: 52 SVDDYKNDTTYFGSVVGRVANRIGGAQFTLDGTHYKLVANEKSNMLHGGPKGFSDVIWKV 111
+V DY D G+ VGR ANRI F+LD +KL N N H + +K
Sbjct: 48 NVQDYLTDGNMMGATVGRYANRIAKGVFSLDDGPHKLTVNNCGNTNHSSISSLNLKQYKA 107
Query: 112 KTYENEGPTPKIV----FSYHSTDGEEGFPGDLDVTVSYSL-TSEKELSVKMKAK-ARNK 165
EN +V H+ FPGDL+VTV Y+L +E L ++ +A+ R
Sbjct: 108 SPVENPSKGVYVVEFKLLDDHTQPNPNEFPGDLEVTVKYTLNVAEMTLDMEYQAQLVRGD 167
Query: 166 ATPVNLAQHSYWNLGG-HSSGDILSQEVQIFASSYTPVDD-QLIPTGKIETVEGTPYDFL 223
ATP+N+ HSY+NL S I EV++ ++ V + L+PTGKI +D
Sbjct: 168 ATPINMTNHSYFNLNKVKSEKSIRGTEVKVCSNKSLEVTEGALLPTGKIIERNIATFDST 227
Query: 224 QPHTIGSSIDKLPGGYDINYVLDKDDSSKKMRKVAI--------VHDKKSGRVMELLADQ 275
+P + +D +++D + K V++ + +S E+ +
Sbjct: 228 KPTVLHEDTPV----FDCTFIIDANKDLKTTDSVSVNKLVPVFKAYHPESHIKFEVSTTE 283
Query: 276 PGVQYYTGGQI 286
P V YTG +
Sbjct: 284 PTVHLYTGDNL 294
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 25/200 (12%)
Query: 289 ELSVKMKAKA---RNKATPVNLAQHSYWNLGGHNS-GDILSQEVQIFASSYTPVDD-QLI 343
E+++ M+ +A R ATP+N+ HSY+NL S I EV++ ++ V + L+
Sbjct: 152 EMTLDMEYQAQLVRGDATPINMTNHSYFNLNKVKSEKSIRGTEVKVCSNKSLEVTEGALL 211
Query: 344 PTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKMRKVAI-------- 395
PTGKI +D +P + + PV +D +++D + K V++
Sbjct: 212 PTGKIIERNIATFDSTKPTVLH---EDTPV-FDCTFIIDANKDLKTTDSVSVNKLVPVFK 267
Query: 396 VHDKKSGRVMELLADQPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQAFPDSVNHPNF 455
+ +S E+ +P V YTG + G FV + +G ++ + D++N +
Sbjct: 268 AYHPESHIKFEVSTTEPTVHLYTGDNL-----CGKFVPR--SGFAVQQGRYVDAINRDEW 320
Query: 456 PNTIVYP-GEKYKHHMLYKF 474
++ GE Y YKF
Sbjct: 321 RGCVLLKRGEVYTSKTQYKF 340
>pdb|1L7J|A Chain A, X-Ray Structure Of Galactose Mutarotase From Lactococcus
Lactis (Apo)
pdb|1L7J|B Chain B, X-Ray Structure Of Galactose Mutarotase From Lactococcus
Lactis (Apo)
pdb|1L7K|A Chain A, X-Ray Structure Of Galactose Mutarotase From Lactococcus
Lactis Complexed With Galactose
pdb|1L7K|B Chain B, X-Ray Structure Of Galactose Mutarotase From Lactococcus
Lactis Complexed With Galactose
pdb|1MMU|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Complexed With D-Glucose
pdb|1MMU|B Chain B, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Complexed With D-Glucose
pdb|1MMX|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Complexed With D-Fucose
pdb|1MMX|B Chain B, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Complexed With D-Fucose
pdb|1MMY|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Complexed With D-Quinovose
pdb|1MMY|B Chain B, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Complexed With D-Quinovose
pdb|1MMZ|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Complexed With L-Arabinose
pdb|1MMZ|B Chain B, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Complexed With L-Arabinose
pdb|1MN0|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Complexed With D-xylose
pdb|1MN0|B Chain B, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Complexed With D-xylose
Length = 347
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 125/276 (45%), Gaps = 23/276 (8%)
Query: 17 KGDFSVKFTNWGATIVSVFLPXXXXXXXXXXXXXXSVDDYKNDTTYFGSVVGRVANRIGG 76
K ++ FTN GA IV S +Y Y G+ VG A RI
Sbjct: 20 KAGVTISFTNLGARIVD-----WQKDGKHLILGFDSAKEYLEKDAYPGATVGPTAGRIKD 74
Query: 77 AQFTLDGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYE--NEGPTPKIVFSYHSTDGEE 134
+ G Y L NE LHGG + +W TYE + G ++ FS S DG
Sbjct: 75 GLVKISGKDYILNQNEGPQTLHGGEESIHTKLW---TYEVTDLGAEVQVKFSLVSNDGTN 131
Query: 135 GFPGDLDVTVSYSLTSEKELSVKMKAKARNKATPVNLAQHSYWNLGGHSSGDILSQEVQI 194
G+PG ++++V++S + + + +A + +K T N H Y+NL G +S + + +++
Sbjct: 132 GYPGKIEMSVTHSFDDDNKWKIHYEAIS-DKDTVFNPTGHVYFNLNGDASESVENHGLRL 190
Query: 195 FASSYTPVDDQL-IPTGKIETVEGTPYDFLQPHTIGSSID------KLPGGYDINYVLDK 247
AS + P+ DQ I G I ++ T DF Q + ++ + +L G D ++LD+
Sbjct: 191 AASRFVPLKDQTEIVRGDIVDIKNTDLDFRQEKQLSNAFNSNMEQVQLVKGIDHPFLLDQ 250
Query: 248 DDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTG 283
K+ ++ + D S + + DQP + +T
Sbjct: 251 LGLDKEQARLTL--DDTS---ISVFTDQPSIVIFTA 281
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 22/190 (11%)
Query: 300 NKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQL-IPTGKIETVEGTPYDF 358
+K T N H Y+NL G S + + +++ AS + P+ DQ I G I ++ T DF
Sbjct: 160 DKDTVFNPTGHVYFNLNGDASESVENHGLRLAASRFVPLKDQTEIVRGDIVDIKNTDLDF 219
Query: 359 LQPHAIGSSID------KLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQP 412
Q + ++ + +L G D ++LD+ K+ ++ + D S + + DQP
Sbjct: 220 RQEKQLSNAFNSNMEQVQLVKGIDHPFLLDQLGLDKEQARLTL--DDTS---ISVFTDQP 274
Query: 413 GVQYYTGGQIKEVRGKGGFVYKK-----HAGLCLETQAFPDSVNHPNFPNTIVYPGEKYK 467
+ +T G G +Y + H G+ E Q P S P + + GEKY+
Sbjct: 275 SIVIFTAN-----FGDLGTLYHEKKQVHHGGITFECQVSPGSEQIPELGDISLKAGEKYQ 329
Query: 468 HHMLYKFSTK 477
+Y TK
Sbjct: 330 ATTIYSLHTK 339
>pdb|1NS0|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Mutant E304q Complexed With Galactose
pdb|1NS0|B Chain B, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Mutant E304q Complexed With Galactose
pdb|1NS4|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Mutant E304q Complexed With Glucose
pdb|1NS4|B Chain B, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Mutant E304q Complexed With Glucose
Length = 347
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 125/276 (45%), Gaps = 23/276 (8%)
Query: 17 KGDFSVKFTNWGATIVSVFLPXXXXXXXXXXXXXXSVDDYKNDTTYFGSVVGRVANRIGG 76
K ++ FTN GA IV S +Y Y G+ VG A RI
Sbjct: 20 KAGVTISFTNLGARIVD-----WQKDGKHLILGFDSAKEYLEKDAYPGATVGPTAGRIKD 74
Query: 77 AQFTLDGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYE--NEGPTPKIVFSYHSTDGEE 134
+ G Y L NE LHGG + +W TYE + G ++ FS S DG
Sbjct: 75 GLVKISGKDYILNQNEGPQTLHGGEESIHTKLW---TYEVTDLGAEVQVKFSLVSNDGTN 131
Query: 135 GFPGDLDVTVSYSLTSEKELSVKMKAKARNKATPVNLAQHSYWNLGGHSSGDILSQEVQI 194
G+PG ++++V++S + + + +A + +K T N H Y+NL G +S + + +++
Sbjct: 132 GYPGKIEMSVTHSFDDDNKWKIHYEAIS-DKDTVFNPTGHVYFNLNGDASESVENHGLRL 190
Query: 195 FASSYTPVDDQL-IPTGKIETVEGTPYDFLQPHTIGSSID------KLPGGYDINYVLDK 247
AS + P+ DQ I G I ++ T DF Q + ++ + +L G D ++LD+
Sbjct: 191 AASRFVPLKDQTEIVRGDIVDIKNTDLDFRQEKQLSNAFNSNMEQVQLVKGIDHPFLLDQ 250
Query: 248 DDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTG 283
K+ ++ + D S + + DQP + +T
Sbjct: 251 LGLDKEQARLTL--DDTS---ISVFTDQPSIVIFTA 281
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 22/190 (11%)
Query: 300 NKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQL-IPTGKIETVEGTPYDF 358
+K T N H Y+NL G S + + +++ AS + P+ DQ I G I ++ T DF
Sbjct: 160 DKDTVFNPTGHVYFNLNGDASESVENHGLRLAASRFVPLKDQTEIVRGDIVDIKNTDLDF 219
Query: 359 LQPHAIGSSID------KLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQP 412
Q + ++ + +L G D ++LD+ K+ ++ + D S + + DQP
Sbjct: 220 RQEKQLSNAFNSNMEQVQLVKGIDHPFLLDQLGLDKEQARLTL--DDTS---ISVFTDQP 274
Query: 413 GVQYYTGGQIKEVRGKGGFVYKK-----HAGLCLETQAFPDSVNHPNFPNTIVYPGEKYK 467
+ +T G G +Y + H G+ + Q P S P + + GEKY+
Sbjct: 275 SIVIFTAN-----FGDLGTLYHEKKQVHHGGITFQCQVSPGSEQIPELGDISLKAGEKYQ 329
Query: 468 HHMLYKFSTK 477
+Y TK
Sbjct: 330 ATTIYSLHTK 339
>pdb|1NS2|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Mutant E304a Complexed With Galactose
pdb|1NS2|B Chain B, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Mutant E304a Complexed With Galactose
pdb|1NS7|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Mutant E304a Complexed With Glucose
pdb|1NS7|B Chain B, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Mutant E304a Complexed With Glucose
Length = 347
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 125/276 (45%), Gaps = 23/276 (8%)
Query: 17 KGDFSVKFTNWGATIVSVFLPXXXXXXXXXXXXXXSVDDYKNDTTYFGSVVGRVANRIGG 76
K ++ FTN GA IV S +Y Y G+ VG A RI
Sbjct: 20 KAGVTISFTNLGARIVD-----WQKDGKHLILGFDSAKEYLEKDAYPGATVGPTAGRIKD 74
Query: 77 AQFTLDGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYE--NEGPTPKIVFSYHSTDGEE 134
+ G Y L NE LHGG + +W TYE + G ++ FS S DG
Sbjct: 75 GLVKISGKDYILNQNEGPQTLHGGEESIHTKLW---TYEVTDLGAEVQVKFSLVSNDGTN 131
Query: 135 GFPGDLDVTVSYSLTSEKELSVKMKAKARNKATPVNLAQHSYWNLGGHSSGDILSQEVQI 194
G+PG ++++V++S + + + +A + +K T N H Y+NL G +S + + +++
Sbjct: 132 GYPGKIEMSVTHSFDDDNKWKIHYEAIS-DKDTVFNPTGHVYFNLNGDASESVENHGLRL 190
Query: 195 FASSYTPVDDQL-IPTGKIETVEGTPYDFLQPHTIGSSID------KLPGGYDINYVLDK 247
AS + P+ DQ I G I ++ T DF Q + ++ + +L G D ++LD+
Sbjct: 191 AASRFVPLKDQTEIVRGDIVDIKNTDLDFRQEKQLSNAFNSNMEQVQLVKGIDHPFLLDQ 250
Query: 248 DDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTG 283
K+ ++ + D S + + DQP + +T
Sbjct: 251 LGLDKEQARLTL--DDTS---ISVFTDQPSIVIFTA 281
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 22/190 (11%)
Query: 300 NKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQL-IPTGKIETVEGTPYDF 358
+K T N H Y+NL G S + + +++ AS + P+ DQ I G I ++ T DF
Sbjct: 160 DKDTVFNPTGHVYFNLNGDASESVENHGLRLAASRFVPLKDQTEIVRGDIVDIKNTDLDF 219
Query: 359 LQPHAIGSSID------KLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQP 412
Q + ++ + +L G D ++LD+ K+ ++ + D S + + DQP
Sbjct: 220 RQEKQLSNAFNSNMEQVQLVKGIDHPFLLDQLGLDKEQARLTL--DDTS---ISVFTDQP 274
Query: 413 GVQYYTGGQIKEVRGKGGFVYKK-----HAGLCLETQAFPDSVNHPNFPNTIVYPGEKYK 467
+ +T G G +Y + H G+ Q P S P + + GEKY+
Sbjct: 275 SIVIFTAN-----FGDLGTLYHEKKQVHHGGITFACQVSPGSEQIPELGDISLKAGEKYQ 329
Query: 468 HHMLYKFSTK 477
+Y TK
Sbjct: 330 ATTIYSLHTK 339
>pdb|3IMH|A Chain A, Crystal Structure Of Galactose 1-Epimerase From
Lactobacillus Acidophilus Ncfm
pdb|3IMH|B Chain B, Crystal Structure Of Galactose 1-Epimerase From
Lactobacillus Acidophilus Ncfm
Length = 338
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 112/249 (44%), Gaps = 23/249 (9%)
Query: 20 FSVKFTNWGATIVSVFLPXXXXXXXXXXXXXXSVDDYKNDTTYFGSVVGRVANRIGGAQF 79
+VK N+GAT+ V L S +DY + + G VGR+A R+ Q+
Sbjct: 29 MAVKVLNYGATLEKVLL-----DGENMILSLNSPEDYSKERNFLGGTVGRIAGRVRAGQW 83
Query: 80 TLDGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHSTDGEEGFPGD 139
++L N+ N +HGG G +W + + ++ + DG +PG+
Sbjct: 84 KHGNEIHQLPLNDGDNHIHGG-IGTDMHVWDFRP-SCDSEHARVDLTLFDPDGNNDYPGN 141
Query: 140 LDVTVSYSLTSEKELSVKMKAKARNKATPVNLAQHSYWNLGGHSSGDILSQEVQIFASSY 199
L + Y L +E L ++A +K T N H+Y+NLG + +Q+ A Y
Sbjct: 142 LKLHARYELDNENNLHYLLEA-VSDKLTIFNPVNHTYFNLGERAE----DLNLQMNADYY 196
Query: 200 TPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSID------KLPGGYDINYVLDKDD---- 249
PVD+ +P + V GT +DF + IG +++ KL G D ++L+ ++
Sbjct: 197 LPVDEAGLPDRGMAEVAGTAFDFRKTKRIGDALNSDDSQIKLRNGLDHPFILNGNNPAAL 256
Query: 250 -SSKKMRKV 257
SS K R +
Sbjct: 257 LSSNKHRLI 265
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 98/229 (42%), Gaps = 34/229 (14%)
Query: 262 DKKSGRVMELLADQPGVQYYTGG-------QIKEELSVKMKAKA-RNKATPVNLAQHSYW 313
D + RV L D G Y G ++ E ++ +A +K T N H+Y+
Sbjct: 119 DSEHARVDLTLFDPDGNNDYPGNLKLHARYELDNENNLHYLLEAVSDKLTIFNPVNHTYF 178
Query: 314 NLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSSID---- 369
NLG + D+ +Q+ A Y PVD+ +P + V GT +DF + IG +++
Sbjct: 179 NLG-ERAEDL---NLQMNADYYLPVDEAGLPDRGMAEVAGTAFDFRKTKRIGDALNSDDS 234
Query: 370 --KLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEVRG 427
KL G D ++L+ ++ + A++ K +++ + P + Y G
Sbjct: 235 QIKLRNGLDHPFILNGNNPA------ALLSSNKHRLIVK--TNAPALVLYAGNHFNHT-- 284
Query: 428 KGGFVYK--KHAGLCLETQAFPDSVNHPNFPNTIVYPGEKYKHHMLYKF 474
G V ++ G+ E Q P N + + P EK+K + +KF
Sbjct: 285 --GIVNNIGQYDGITFEAQCPPAEGN--DLGQITLLPFEKFKRTVDWKF 329
>pdb|1NS8|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Mutant D243n Complexed With Galactose
pdb|1NS8|B Chain B, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Mutant D243n Complexed With Galactose
pdb|1NSR|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Mutant D243n Complexed With Glucose
pdb|1NSR|B Chain B, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Mutant D243n Complexed With Glucose
Length = 347
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 125/276 (45%), Gaps = 23/276 (8%)
Query: 17 KGDFSVKFTNWGATIVSVFLPXXXXXXXXXXXXXXSVDDYKNDTTYFGSVVGRVANRIGG 76
K ++ FTN GA IV S +Y Y G+ VG A RI
Sbjct: 20 KAGVTISFTNLGARIVD-----WQKDGKHLILGFDSAKEYLEKDAYPGATVGPTAGRIKD 74
Query: 77 AQFTLDGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYE--NEGPTPKIVFSYHSTDGEE 134
+ G Y L NE LHGG + +W TYE + G ++ FS S DG
Sbjct: 75 GLVKISGKDYILNQNEGPQTLHGGEESIHTKLW---TYEVTDLGAEVQVKFSLVSNDGTN 131
Query: 135 GFPGDLDVTVSYSLTSEKELSVKMKAKARNKATPVNLAQHSYWNLGGHSSGDILSQEVQI 194
G+PG ++++V++S + + + +A + +K T N H Y+NL G +S + + +++
Sbjct: 132 GYPGKIEMSVTHSFDDDNKWKIHYEAIS-DKDTVFNPTGHVYFNLNGDASESVENHGLRL 190
Query: 195 FASSYTPVDDQL-IPTGKIETVEGTPYDFLQPHTIGSSID------KLPGGYDINYVLDK 247
AS + P+ DQ I G I ++ T DF Q + ++ + +L G + ++LD+
Sbjct: 191 AASRFVPLKDQTEIVRGDIVDIKNTDLDFRQEKQLSNAFNSNMEQVQLVKGINHPFLLDQ 250
Query: 248 DDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTG 283
K+ ++ + D S + + DQP + +T
Sbjct: 251 LGLDKEQARLTL--DDTS---ISVFTDQPSIVIFTA 281
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 22/190 (11%)
Query: 300 NKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQL-IPTGKIETVEGTPYDF 358
+K T N H Y+NL G S + + +++ AS + P+ DQ I G I ++ T DF
Sbjct: 160 DKDTVFNPTGHVYFNLNGDASESVENHGLRLAASRFVPLKDQTEIVRGDIVDIKNTDLDF 219
Query: 359 LQ----PHAIGSSIDKLPVGYDIN--YVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQP 412
Q +A S+++++ + IN ++LD+ K+ ++ + D S + + DQP
Sbjct: 220 RQEKQLSNAFNSNMEQVQLVKGINHPFLLDQLGLDKEQARLTL--DDTS---ISVFTDQP 274
Query: 413 GVQYYTGGQIKEVRGKGGFVYKK-----HAGLCLETQAFPDSVNHPNFPNTIVYPGEKYK 467
+ +T G G +Y + H G+ E Q P S P + + GEKY+
Sbjct: 275 SIVIFTAN-----FGDLGTLYHEKKQVHHGGITFECQVSPGSEQIPELGDISLKAGEKYQ 329
Query: 468 HHMLYKFSTK 477
+Y TK
Sbjct: 330 ATTIYSLHTK 339
>pdb|1NSU|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Mutant H96n Complexed With Galactose
pdb|1NSU|B Chain B, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Mutant H96n Complexed With Galactose
pdb|1NSV|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Mutant H96n Complexed With Glucose
pdb|1NSV|B Chain B, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Mutant H96n Complexed With Glucose
Length = 347
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 125/276 (45%), Gaps = 23/276 (8%)
Query: 17 KGDFSVKFTNWGATIVSVFLPXXXXXXXXXXXXXXSVDDYKNDTTYFGSVVGRVANRIGG 76
K ++ FTN GA IV S +Y Y G+ VG A RI
Sbjct: 20 KAGVTISFTNLGARIVD-----WQKDGKHLILGFDSAKEYLEKDAYPGATVGPTAGRIKD 74
Query: 77 AQFTLDGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYE--NEGPTPKIVFSYHSTDGEE 134
+ G Y L NE L+GG + +W TYE + G ++ FS S DG
Sbjct: 75 GLVKISGKDYILNQNEGPQTLNGGEESIHTKLW---TYEVTDLGAEVQVKFSLVSNDGTN 131
Query: 135 GFPGDLDVTVSYSLTSEKELSVKMKAKARNKATPVNLAQHSYWNLGGHSSGDILSQEVQI 194
G+PG ++++V++S + + + +A + +K T N H Y+NL G +S + + +++
Sbjct: 132 GYPGKIEMSVTHSFDDDNKWKIHYEAIS-DKDTVFNPTGHVYFNLNGDASESVENHGLRL 190
Query: 195 FASSYTPVDDQL-IPTGKIETVEGTPYDFLQPHTIGSSID------KLPGGYDINYVLDK 247
AS + P+ DQ I G I ++ T DF Q + ++ + +L G D ++LD+
Sbjct: 191 AASRFVPLKDQTEIVRGDIVDIKNTDLDFRQEKQLSNAFNSNMEQVQLVKGIDHPFLLDQ 250
Query: 248 DDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTG 283
K+ ++ + D S + + DQP + +T
Sbjct: 251 LGLDKEQARLTL--DDTS---ISVFTDQPSIVIFTA 281
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 22/190 (11%)
Query: 300 NKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQL-IPTGKIETVEGTPYDF 358
+K T N H Y+NL G S + + +++ AS + P+ DQ I G I ++ T DF
Sbjct: 160 DKDTVFNPTGHVYFNLNGDASESVENHGLRLAASRFVPLKDQTEIVRGDIVDIKNTDLDF 219
Query: 359 LQPHAIGSSID------KLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQP 412
Q + ++ + +L G D ++LD+ K+ ++ + D S + + DQP
Sbjct: 220 RQEKQLSNAFNSNMEQVQLVKGIDHPFLLDQLGLDKEQARLTL--DDTS---ISVFTDQP 274
Query: 413 GVQYYTGGQIKEVRGKGGFVYKK-----HAGLCLETQAFPDSVNHPNFPNTIVYPGEKYK 467
+ +T G G +Y + H G+ E Q P S P + + GEKY+
Sbjct: 275 SIVIFTAN-----FGDLGTLYHEKKQVHHGGITFECQVSPGSEQIPELGDISLKAGEKYQ 329
Query: 468 HHMLYKFSTK 477
+Y TK
Sbjct: 330 ATTIYSLHTK 339
>pdb|1NSX|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Mutant H170n Complexed With Galactose
pdb|1NSX|B Chain B, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Mutant H170n Complexed With Galactose
pdb|1NSZ|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Mutant H170n Complexed With Glucose
pdb|1NSZ|B Chain B, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Mutant H170n Complexed With Glucose
Length = 347
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 125/276 (45%), Gaps = 23/276 (8%)
Query: 17 KGDFSVKFTNWGATIVSVFLPXXXXXXXXXXXXXXSVDDYKNDTTYFGSVVGRVANRIGG 76
K ++ FTN GA IV S +Y Y G+ VG A RI
Sbjct: 20 KAGVTISFTNLGARIVD-----WQKDGKHLILGFDSAKEYLEKDAYPGATVGPTAGRIKD 74
Query: 77 AQFTLDGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYE--NEGPTPKIVFSYHSTDGEE 134
+ G Y L NE LHGG + +W TYE + G ++ FS S DG
Sbjct: 75 GLVKISGKDYILNQNEGPQTLHGGEESIHTKLW---TYEVTDLGAEVQVKFSLVSNDGTN 131
Query: 135 GFPGDLDVTVSYSLTSEKELSVKMKAKARNKATPVNLAQHSYWNLGGHSSGDILSQEVQI 194
G+PG ++++V++S + + + +A + +K T N + Y+NL G +S + + +++
Sbjct: 132 GYPGKIEMSVTHSFDDDNKWKIHYEAIS-DKDTVFNPTGNVYFNLNGDASESVENHGLRL 190
Query: 195 FASSYTPVDDQL-IPTGKIETVEGTPYDFLQPHTIGSSID------KLPGGYDINYVLDK 247
AS + P+ DQ I G I ++ T DF Q + ++ + +L G D ++LD+
Sbjct: 191 AASRFVPLKDQTEIVRGDIVDIKNTDLDFRQEKQLSNAFNSNMEQVQLVKGIDHPFLLDQ 250
Query: 248 DDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTG 283
K+ ++ + D S + + DQP + +T
Sbjct: 251 LGLDKEQARLTL--DDTS---ISVFTDQPSIVIFTA 281
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 22/190 (11%)
Query: 300 NKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQL-IPTGKIETVEGTPYDF 358
+K T N + Y+NL G S + + +++ AS + P+ DQ I G I ++ T DF
Sbjct: 160 DKDTVFNPTGNVYFNLNGDASESVENHGLRLAASRFVPLKDQTEIVRGDIVDIKNTDLDF 219
Query: 359 LQPHAIGSSID------KLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQP 412
Q + ++ + +L G D ++LD+ K+ ++ + D S + + DQP
Sbjct: 220 RQEKQLSNAFNSNMEQVQLVKGIDHPFLLDQLGLDKEQARLTL--DDTS---ISVFTDQP 274
Query: 413 GVQYYTGGQIKEVRGKGGFVYKK-----HAGLCLETQAFPDSVNHPNFPNTIVYPGEKYK 467
+ +T G G +Y + H G+ E Q P S P + + GEKY+
Sbjct: 275 SIVIFTAN-----FGDLGTLYHEKKQVHHGGITFECQVSPGSEQIPELGDISLKAGEKYQ 329
Query: 468 HHMLYKFSTK 477
+Y TK
Sbjct: 330 ATTIYSLHTK 339
>pdb|1NSM|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Mutant D243a Complexed With Galactose
pdb|1NSM|B Chain B, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Mutant D243a Complexed With Galactose
pdb|1NSS|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Mutant D243a Complexed With Glucose
pdb|1NSS|B Chain B, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Mutant D243a Complexed With Glucose
Length = 347
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 124/276 (44%), Gaps = 23/276 (8%)
Query: 17 KGDFSVKFTNWGATIVSVFLPXXXXXXXXXXXXXXSVDDYKNDTTYFGSVVGRVANRIGG 76
K ++ FTN GA IV S +Y Y G+ VG A RI
Sbjct: 20 KAGVTISFTNLGARIVD-----WQKDGKHLILGFDSAKEYLEKDAYPGATVGPTAGRIKD 74
Query: 77 AQFTLDGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYE--NEGPTPKIVFSYHSTDGEE 134
+ G Y L NE LHGG + +W TYE + G ++ FS S DG
Sbjct: 75 GLVKISGKDYILNQNEGPQTLHGGEESIHTKLW---TYEVTDLGAEVQVKFSLVSNDGTN 131
Query: 135 GFPGDLDVTVSYSLTSEKELSVKMKAKARNKATPVNLAQHSYWNLGGHSSGDILSQEVQI 194
G+PG ++++V++S + + + +A + +K T N H Y+NL G +S + + +++
Sbjct: 132 GYPGKIEMSVTHSFDDDNKWKIHYEAIS-DKDTVFNPTGHVYFNLNGDASESVENHGLRL 190
Query: 195 FASSYTPVDDQL-IPTGKIETVEGTPYDFLQPHTIGSSID------KLPGGYDINYVLDK 247
AS + P+ DQ I G I ++ T DF Q + ++ + +L G ++LD+
Sbjct: 191 AASRFVPLKDQTEIVRGDIVDIKNTDLDFRQEKQLSNAFNSNMEQVQLVKGIAHPFLLDQ 250
Query: 248 DDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTG 283
K+ ++ + D S + + DQP + +T
Sbjct: 251 LGLDKEQARLTL--DDTS---ISVFTDQPSIVIFTA 281
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 22/190 (11%)
Query: 300 NKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQL-IPTGKIETVEGTPYDF 358
+K T N H Y+NL G S + + +++ AS + P+ DQ I G I ++ T DF
Sbjct: 160 DKDTVFNPTGHVYFNLNGDASESVENHGLRLAASRFVPLKDQTEIVRGDIVDIKNTDLDF 219
Query: 359 LQPHAIGSSID------KLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQP 412
Q + ++ + +L G ++LD+ K+ ++ + D S + + DQP
Sbjct: 220 RQEKQLSNAFNSNMEQVQLVKGIAHPFLLDQLGLDKEQARLTL--DDTS---ISVFTDQP 274
Query: 413 GVQYYTGGQIKEVRGKGGFVYKK-----HAGLCLETQAFPDSVNHPNFPNTIVYPGEKYK 467
+ +T G G +Y + H G+ E Q P S P + + GEKY+
Sbjct: 275 SIVIFTAN-----FGDLGTLYHEKKQVHHGGITFECQVSPGSEQIPELGDISLKAGEKYQ 329
Query: 468 HHMLYKFSTK 477
+Y TK
Sbjct: 330 ATTIYSLHTK 339
>pdb|3OS7|A Chain A, Crystal Structure Of A Galactose Mutarotase-Like Protein
(Ca_c0697) From Clostridium Acetobutylicum At 1.80 A
Resolution
pdb|3OS7|B Chain B, Crystal Structure Of A Galactose Mutarotase-Like Protein
(Ca_c0697) From Clostridium Acetobutylicum At 1.80 A
Resolution
pdb|3OS7|C Chain C, Crystal Structure Of A Galactose Mutarotase-Like Protein
(Ca_c0697) From Clostridium Acetobutylicum At 1.80 A
Resolution
pdb|3OS7|D Chain D, Crystal Structure Of A Galactose Mutarotase-Like Protein
(Ca_c0697) From Clostridium Acetobutylicum At 1.80 A
Resolution
Length = 341
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 91/221 (41%), Gaps = 12/221 (5%)
Query: 54 DDYKNDTTYFGSVVGRVANRIGGAQFTLDGTHYKLVANE--KSNMLHGGPKGFSDVIWKV 111
+D+KN +G V NRI F L YK NE +N +HG K + K
Sbjct: 63 EDFKNRPQVYGLPVLFPPNRIDDGTFKLGDKTYKFPINEAKNNNYIHGFIKNSKWTVHKK 122
Query: 112 KTYENEGPTPKIVFSY-HSTDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKARNKATPVN 170
K +++ ++VF + + + F + +SY L+S+ ++ P++
Sbjct: 123 KIDQDKALV-EVVFDFTKENEAYKYFSHEFQFKLSYELSSKGLKQTTSVVNLSSEEXPLS 181
Query: 171 LAQHSYWNLGGHSSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGS 230
+ HS +N+ + + V+I + D + +PTG+ G ++L+ +
Sbjct: 182 VGYHSAFNVPFIEGSEDSNCRVKISIDKFWKQDSRNLPTGESFAPTGEQKEYLENGVAVA 241
Query: 231 S--IDKLPGGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVM 269
S I+ L DI D + K R I K+ RV+
Sbjct: 242 SHPIESLFSLKDI------DVNGKTFRGACIEDASKNTRVV 276
>pdb|3MWX|A Chain A, Crystal Structure Of A Putative Galactose Mutarotase
(Bsu18360) From Bacillus Subtilis At 1.45 A Resolution
pdb|3MWX|B Chain B, Crystal Structure Of A Putative Galactose Mutarotase
(Bsu18360) From Bacillus Subtilis At 1.45 A Resolution
Length = 326
Score = 32.0 bits (71), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 78/200 (39%), Gaps = 29/200 (14%)
Query: 27 WGATIVSVFLPXXXXXXXXXXXXXXSVDDYKNDTTYFGSVVGRVANRIGGAQFTLDGTHY 86
WG+ ++S+ + + + + T +G + NRI F+ G Y
Sbjct: 32 WGSNVISLV---DKTTNVQLLREPETAESFHDTPTLYGIPILFPPNRISDGTFSFRGRTY 88
Query: 87 KLVANEKS--NMLHGGPKGFSDVIWKVKTYE--NEGPTPKIVFSYHSTDG-EEGFPGDLD 141
NEK N LHG W V T + +EG + ++ FP
Sbjct: 89 HFDINEKDKHNHLHG---FLYHEKWNVVTTKQTDEGVIVETEIDLSELPHVQKQFPHHAV 145
Query: 142 VTVSYSLTSEKELSVKMKAKARNK---ATPVNLAQHSYWNLGGHSSGDILSQEVQIF--- 195
V +Y++ KE ++ A NK A P W +G H++ I E +F
Sbjct: 146 VRXTYTI---KENTLFKHATVXNKGKEAFP--------WGIGYHTTF-IFPAESSLFSLT 193
Query: 196 ASSYTPVDDQLIPTGKIETV 215
A +D++L+PTGK+ V
Sbjct: 194 ADQQWELDERLLPTGKLXDV 213
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.313 0.134 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,693,595
Number of Sequences: 62578
Number of extensions: 704586
Number of successful extensions: 1167
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1101
Number of HSP's gapped (non-prelim): 36
length of query: 478
length of database: 14,973,337
effective HSP length: 103
effective length of query: 375
effective length of database: 8,527,803
effective search space: 3197926125
effective search space used: 3197926125
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 53 (25.0 bits)