BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047922
(478 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5EA79|GALM_BOVIN Aldose 1-epimerase OS=Bos taurus GN=GALM PE=2 SV=1
Length = 342
Score = 224 bits (571), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 126/288 (43%), Positives = 170/288 (59%), Gaps = 11/288 (3%)
Query: 10 VKFYELKKGDFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGR 69
V+ ++L+ V +WG TI ++ + D+ G+ DVVLG+D ++ Y YFG+VVGR
Sbjct: 19 VEKFQLQSDQLRVDIISWGCTITALEVKDRQGRASDVVLGFDELEGYLQKQPYFGAVVGR 78
Query: 70 VANRIGGAQFTLDGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHS 129
VANRI FTLDG YKL N N LHGG KGF V+W + N + FS S
Sbjct: 79 VANRIAKGTFTLDGKEYKLAINNGPNSLHGGVKGFDKVLWTPRVLSN-----GVEFSRVS 133
Query: 130 TDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKARNKATPVNLAQHSYWNLGGHSSGDILS 189
DGEEG+PG+L V V Y+L EL V +A+A ++ TPVNL HSY+NL G S +I
Sbjct: 134 PDGEEGYPGELKVWVMYTLDG-GELVVNYRAQA-SQTTPVNLTNHSYFNLAGQGSPNIYD 191
Query: 190 QEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKL-PGGYDINYVLDKD 248
EV I A ++ PVD+ LIPTG+I +V+GT +D +P +G + + G+D N+ L
Sbjct: 192 HEVTIEADAFLPVDEVLIPTGEIASVQGTAFDLRKPVELGKHLQEFHVNGFDHNFCL--- 248
Query: 249 DSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKA 296
SK+ R A VH SGRV+E+ QPGVQ+YTG + L K A
Sbjct: 249 KGSKEKRFCARVHHAGSGRVLEVYTTQPGVQFYTGNFLDGTLKGKSGA 296
Score = 168 bits (425), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 123/190 (64%), Gaps = 6/190 (3%)
Query: 289 ELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKI 348
EL V +A+A ++ TPVNL HSY+NL G S +I EV I A ++ PVD+ LIPTG+I
Sbjct: 156 ELVVNYRAQA-SQTTPVNLTNHSYFNLAGQGSPNIYDHEVTIEADAFLPVDEVLIPTGEI 214
Query: 349 ETVEGTPYDFLQPHAIGSSIDKLPV-GYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMEL 407
+V+GT +D +P +G + + V G+D N+ L SK+ R A VH SGRV+E+
Sbjct: 215 ASVQGTAFDLRKPVELGKHLQEFHVNGFDHNFCL---KGSKEKRFCARVHHAGSGRVLEV 271
Query: 408 LADQPGVQYYTGGQIK-EVRGKGGFVYKKHAGLCLETQAFPDSVNHPNFPNTIVYPGEKY 466
QPGVQ+YTG + ++GK G Y KH+G CLETQ++PD+VN P+FP ++ PGE+Y
Sbjct: 272 YTTQPGVQFYTGNFLDGTLKGKSGAGYPKHSGFCLETQSWPDAVNQPHFPPVLLKPGEEY 331
Query: 467 KHHMLYKFST 476
H +KFS
Sbjct: 332 DHTTWFKFSV 341
>sp|Q9GKX6|GALM_PIG Aldose 1-epimerase OS=Sus scrofa GN=GALM PE=2 SV=1
Length = 342
Score = 221 bits (564), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 123/288 (42%), Positives = 170/288 (59%), Gaps = 11/288 (3%)
Query: 10 VKFYELKKGDFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGR 69
V+ ++L+ V +WG TI ++ + D+ G+ DVVLG+ + +Y YFG+VVGR
Sbjct: 19 VEKFQLQSDQLRVDIISWGCTITALEVKDRQGRASDVVLGFAELKEYLQKHPYFGAVVGR 78
Query: 70 VANRIGGAQFTLDGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHS 129
VANRI FTLDG YKL N N LHGG +GF V+W + N I FS S
Sbjct: 79 VANRIAKGTFTLDGKEYKLAINNGPNSLHGGVRGFDKVLWTPRVLSN-----GIEFSRVS 133
Query: 130 TDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKARNKATPVNLAQHSYWNLGGHSSGDILS 189
DGEEG+PG+L V V+Y+L EL V +A+A ++ TPVNL HSY+NL G S +I
Sbjct: 134 PDGEEGYPGELKVWVTYTLDG-GELVVNYRAQA-SQTTPVNLTNHSYFNLAGQGSPNIYD 191
Query: 190 QEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLP-GGYDINYVLDKD 248
EV I A ++ PVD+ LIPTG+I V+GT +D +P +G + + G+D N+ L +
Sbjct: 192 HEVTIEADAFLPVDETLIPTGEIAPVQGTAFDLRKPVELGKHLQEFHINGFDHNFCLKR- 250
Query: 249 DSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKA 296
SK+ + A VH SGRV+E+ QPG+Q+YTG + L K A
Sbjct: 251 --SKEKQFCARVHHAGSGRVLEVYTTQPGIQFYTGNFLDGTLKGKTGA 296
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 122/189 (64%), Gaps = 6/189 (3%)
Query: 289 ELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKI 348
EL V +A+A ++ TPVNL HSY+NL G S +I EV I A ++ PVD+ LIPTG+I
Sbjct: 156 ELVVNYRAQA-SQTTPVNLTNHSYFNLAGQGSPNIYDHEVTIEADAFLPVDETLIPTGEI 214
Query: 349 ETVEGTPYDFLQPHAIGSSIDKLPV-GYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMEL 407
V+GT +D +P +G + + + G+D N+ L + SK+ + A VH SGRV+E+
Sbjct: 215 APVQGTAFDLRKPVELGKHLQEFHINGFDHNFCLKR---SKEKQFCARVHHAGSGRVLEV 271
Query: 408 LADQPGVQYYTGGQIK-EVRGKGGFVYKKHAGLCLETQAFPDSVNHPNFPNTIVYPGEKY 466
QPG+Q+YTG + ++GK G VY KH+G CLETQ +P++VN P+FP ++ PGE+Y
Sbjct: 272 YTTQPGIQFYTGNFLDGTLKGKTGAVYPKHSGFCLETQNWPNAVNQPHFPPVLLKPGEEY 331
Query: 467 KHHMLYKFS 475
H + FS
Sbjct: 332 NHTTWFVFS 340
>sp|Q66HG4|GALM_RAT Aldose 1-epimerase OS=Rattus norvegicus GN=Galm PE=1 SV=1
Length = 342
Score = 220 bits (561), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 121/275 (44%), Positives = 166/275 (60%), Gaps = 11/275 (4%)
Query: 10 VKFYELKKGDFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGR 69
V+ ++L+ +V +WG TI ++ + D+ GK DVVLG+ ++ Y YFG+VVGR
Sbjct: 19 VEKFQLRSDQLNVDIISWGCTITALQVKDRQGKASDVVLGFAELEGYLQKQPYFGAVVGR 78
Query: 70 VANRIGGAQFTLDGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHS 129
VANRI +FT+DG Y L N + N LHGG +GF V+W + N + FS S
Sbjct: 79 VANRIAKGRFTVDGKEYHLPINREPNSLHGGFRGFDKVLWTPQVLSN-----GVQFSRVS 133
Query: 130 TDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKARNKATPVNLAQHSYWNLGGHSSGDILS 189
DGEEG+PG+L V V+Y+L EL V +A+A ++ TPVNL HSY+NL G S DI
Sbjct: 134 PDGEEGYPGELKVWVTYTLDG-GELVVNYRAQA-SQTTPVNLTNHSYFNLAGQGSPDIYD 191
Query: 190 QEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLP-GGYDINYVLDKD 248
EV I A +Y PVD+ LIPTG I VEGT +D +P +G + G+D N+ L +
Sbjct: 192 HEVTIAADAYLPVDETLIPTGVIAPVEGTAFDLRKPVELGKHLQSYHIHGFDHNFCLKE- 250
Query: 249 DSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTG 283
SK+ + A VH SGR++E+ QPGVQ+YTG
Sbjct: 251 --SKEKKFCARVHHAASGRILEVYTTQPGVQFYTG 283
Score = 169 bits (429), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 120/189 (63%), Gaps = 6/189 (3%)
Query: 289 ELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKI 348
EL V +A+A ++ TPVNL HSY+NL G S DI EV I A +Y PVD+ LIPTG I
Sbjct: 156 ELVVNYRAQA-SQTTPVNLTNHSYFNLAGQGSPDIYDHEVTIAADAYLPVDETLIPTGVI 214
Query: 349 ETVEGTPYDFLQPHAIGSSIDKLPV-GYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMEL 407
VEGT +D +P +G + + G+D N+ L + SK+ + A VH SGR++E+
Sbjct: 215 APVEGTAFDLRKPVELGKHLQSYHIHGFDHNFCLKE---SKEKKFCARVHHAASGRILEV 271
Query: 408 LADQPGVQYYTGGQIK-EVRGKGGFVYKKHAGLCLETQAFPDSVNHPNFPNTIVYPGEKY 466
QPGVQ+YTG + ++GK G VY KH+G CLETQ +PD+VN P FP ++ PGE+Y
Sbjct: 272 YTTQPGVQFYTGNFLDGTLKGKSGEVYPKHSGFCLETQNWPDAVNQPQFPPILLRPGEEY 331
Query: 467 KHHMLYKFS 475
H +KFS
Sbjct: 332 NHTTWFKFS 340
>sp|Q96C23|GALM_HUMAN Aldose 1-epimerase OS=Homo sapiens GN=GALM PE=1 SV=1
Length = 342
Score = 216 bits (550), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 128/318 (40%), Positives = 182/318 (57%), Gaps = 20/318 (6%)
Query: 10 VKFYELKKGDFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGR 69
V+ ++L+ V +WG TI ++ + D+ G+ DVVLG+ ++ Y YFG+V+GR
Sbjct: 19 VEKFQLQSDLLRVDIISWGCTITALEVKDRQGRASDVVLGFAELEGYLQKQPYFGAVIGR 78
Query: 70 VANRIGGAQFTLDGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHS 129
VANRI F +DG Y L N++ N LHGG +GF V+W + N + FS S
Sbjct: 79 VANRIAKGTFKVDGKEYHLAINKEPNSLHGGVRGFDKVLWTPRVLSN-----GVQFSRIS 133
Query: 130 TDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKARNKATPVNLAQHSYWNLGGHSSGDILS 189
DGEEG+PG+L V V+Y+L EL V +A+A ++ATPVNL HSY+NL G +S +I
Sbjct: 134 PDGEEGYPGELKVWVTYTLDG-GELIVNYRAQA-SQATPVNLTNHSYFNLAGQASPNIND 191
Query: 190 QEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSI-DKLPGGYDINYVLDKD 248
EV I A +Y PVD+ LIPTG++ V+GT +D +P +G + D G+D N+ L
Sbjct: 192 HEVTIEADTYLPVDETLIPTGEVAPVQGTAFDLRKPVELGKHLQDFHLNGFDHNFCL--- 248
Query: 249 DSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLA 308
SK+ A VH SGRV+E+ QPGVQ+YTG + L K +N A
Sbjct: 249 KGSKEKHFCARVHHAASGRVLEVYTTQPGVQFYTGNFLDGTL------KGKNGAV---YP 299
Query: 309 QHSYWNLGGHNSGDILSQ 326
+HS + L N D ++Q
Sbjct: 300 KHSGFCLETQNWPDAVNQ 317
Score = 167 bits (422), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 120/189 (63%), Gaps = 6/189 (3%)
Query: 289 ELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKI 348
EL V +A+A ++ATPVNL HSY+NL G S +I EV I A +Y PVD+ LIPTG++
Sbjct: 156 ELIVNYRAQA-SQATPVNLTNHSYFNLAGQASPNINDHEVTIEADTYLPVDETLIPTGEV 214
Query: 349 ETVEGTPYDFLQPHAIGSSIDKLPV-GYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMEL 407
V+GT +D +P +G + + G+D N+ L SK+ A VH SGRV+E+
Sbjct: 215 APVQGTAFDLRKPVELGKHLQDFHLNGFDHNFCL---KGSKEKHFCARVHHAASGRVLEV 271
Query: 408 LADQPGVQYYTGGQIK-EVRGKGGFVYKKHAGLCLETQAFPDSVNHPNFPNTIVYPGEKY 466
QPGVQ+YTG + ++GK G VY KH+G CLETQ +PD+VN P FP ++ PGE+Y
Sbjct: 272 YTTQPGVQFYTGNFLDGTLKGKNGAVYPKHSGFCLETQNWPDAVNQPRFPPVLLRPGEEY 331
Query: 467 KHHMLYKFS 475
H +KFS
Sbjct: 332 DHTTWFKFS 340
>sp|Q5R8U1|GALM_PONAB Aldose 1-epimerase OS=Pongo abelii GN=GALM PE=2 SV=1
Length = 342
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 128/318 (40%), Positives = 180/318 (56%), Gaps = 20/318 (6%)
Query: 10 VKFYELKKGDFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGR 69
V+ ++L+ V +WG TI ++ + D+ G+ DVVLG+ ++ Y YFG+V+GR
Sbjct: 19 VEKFQLQSDLLRVDIISWGCTITALEVKDRQGRSSDVVLGFAELEGYLQKQPYFGAVIGR 78
Query: 70 VANRIGGAQFTLDGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHS 129
VANRI F +DG Y L N++ N LHGG +GF V+W + N I FS S
Sbjct: 79 VANRIAKGTFKVDGKEYHLAINKEPNSLHGGVRGFDKVLWTPRVLSN-----GIQFSRIS 133
Query: 130 TDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKARNKATPVNLAQHSYWNLGGHSSGDILS 189
DGEEG+PG+L V V+Y+L EL V +A+A ++ATPVNL HSY+NL G S +I
Sbjct: 134 PDGEEGYPGELKVWVTYTLDG-GELVVNYRAQA-SQATPVNLTNHSYFNLAGQGSPNIYD 191
Query: 190 QEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSI-DKLPGGYDINYVLDKD 248
EV I A +Y PVD+ LIPTG++ V+GT +D +P +G + D G+D N+ L
Sbjct: 192 HEVTIEADTYLPVDETLIPTGEVAPVQGTAFDLRKPVELGKHLQDFHLNGFDHNFCL--- 248
Query: 249 DSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLA 308
SK+ A VH SGRV+E+ QPGVQ+Y G + L K +N A
Sbjct: 249 KGSKEKHFCARVHHAASGRVLEVYTTQPGVQFYMGNFLDGTL------KGKNGAV---YP 299
Query: 309 QHSYWNLGGHNSGDILSQ 326
+HS + L N D ++Q
Sbjct: 300 KHSGFCLETQNWPDAVNQ 317
Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 119/190 (62%), Gaps = 6/190 (3%)
Query: 289 ELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKI 348
EL V +A+A ++ATPVNL HSY+NL G S +I EV I A +Y PVD+ LIPTG++
Sbjct: 156 ELVVNYRAQA-SQATPVNLTNHSYFNLAGQGSPNIYDHEVTIEADTYLPVDETLIPTGEV 214
Query: 349 ETVEGTPYDFLQPHAIGSSIDKLPV-GYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMEL 407
V+GT +D +P +G + + G+D N+ L SK+ A VH SGRV+E+
Sbjct: 215 APVQGTAFDLRKPVELGKHLQDFHLNGFDHNFCL---KGSKEKHFCARVHHAASGRVLEV 271
Query: 408 LADQPGVQYYTGGQIK-EVRGKGGFVYKKHAGLCLETQAFPDSVNHPNFPNTIVYPGEKY 466
QPGVQ+Y G + ++GK G VY KH+G CLETQ +PD+VN P FP ++ PGE+Y
Sbjct: 272 YTTQPGVQFYMGNFLDGTLKGKNGAVYPKHSGFCLETQNWPDAVNQPRFPPVLLRPGEEY 331
Query: 467 KHHMLYKFST 476
H +KFS
Sbjct: 332 DHTTWFKFSV 341
>sp|Q8K157|GALM_MOUSE Aldose 1-epimerase OS=Mus musculus GN=Galm PE=2 SV=1
Length = 342
Score = 213 bits (541), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 118/275 (42%), Positives = 164/275 (59%), Gaps = 11/275 (4%)
Query: 10 VKFYELKKGDFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGR 69
V+ ++L+ SV +WG TI ++ + D+ GK DVVLG+ ++ Y YFG+VVGR
Sbjct: 19 VEKFQLRSDQLSVDIISWGCTITALQVKDRQGKASDVVLGFAELEGYLQKQPYFGAVVGR 78
Query: 70 VANRIGGAQFTLDGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHS 129
VANRI +FT+ G Y L N + N LHGG GF V+W + N + F S
Sbjct: 79 VANRIAKGRFTIGGKEYHLPVNREPNSLHGGFTGFDKVLWTPQVLTN-----GVQFFRVS 133
Query: 130 TDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKARNKATPVNLAQHSYWNLGGHSSGDILS 189
DGEEG+PG+L V V+Y+L EL + +A+A ++ TPVNL HSY+NL G S +I
Sbjct: 134 PDGEEGYPGELKVWVTYTLDG-GELVINYRAQA-SQTTPVNLTNHSYFNLAGQGSPNIYD 191
Query: 190 QEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSI-DKLPGGYDINYVLDKD 248
EV I A +Y PVD+ LIPTG I VEGT +D +P +G+ + D G+D N+ L +
Sbjct: 192 HEVTIAADAYLPVDETLIPTGVIAPVEGTAFDLRKPVELGTHLQDYHIHGFDHNFCLKE- 250
Query: 249 DSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTG 283
SK+ + A V SGR++E+ QPGVQ+YTG
Sbjct: 251 --SKEKKFCARVRHAASGRILEVYTTQPGVQFYTG 283
Score = 168 bits (426), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 121/189 (64%), Gaps = 6/189 (3%)
Query: 289 ELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKI 348
EL + +A+A ++ TPVNL HSY+NL G S +I EV I A +Y PVD+ LIPTG I
Sbjct: 156 ELVINYRAQA-SQTTPVNLTNHSYFNLAGQGSPNIYDHEVTIAADAYLPVDETLIPTGVI 214
Query: 349 ETVEGTPYDFLQPHAIGSSIDKLPV-GYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMEL 407
VEGT +D +P +G+ + + G+D N+ L + SK+ + A V SGR++E+
Sbjct: 215 APVEGTAFDLRKPVELGTHLQDYHIHGFDHNFCLKE---SKEKKFCARVRHAASGRILEV 271
Query: 408 LADQPGVQYYTGGQIK-EVRGKGGFVYKKHAGLCLETQAFPDSVNHPNFPNTIVYPGEKY 466
QPGVQ+YTG + ++GK G VY KH+GLCLETQ +PDSVN P FP ++ PGE+Y
Sbjct: 272 YTTQPGVQFYTGNFLDGTLKGKNGAVYPKHSGLCLETQNWPDSVNQPQFPPALLRPGEEY 331
Query: 467 KHHMLYKFS 475
H +KFS
Sbjct: 332 NHTTWFKFS 340
>sp|P05149|GALM_ACICA Aldose 1-epimerase OS=Acinetobacter calcoaceticus GN=mro PE=1 SV=1
Length = 381
Score = 189 bits (479), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 159/291 (54%), Gaps = 15/291 (5%)
Query: 6 NSEEVKFYELKKGD-FSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTT--- 61
N ++V Y + + SV F ++G I + PD GK +++VLG+D + Y+ T
Sbjct: 33 NGQKVDLYTMSNNNGVSVSFISFGGVITQILTPDAQGKQNNIVLGFDDLKGYEVTDTKEG 92
Query: 62 -YFGSVVGRVANRIGGAQFTLDGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPT 120
+FG ++GR ANRIG A+F+LDG Y L N N LH G GF +W+VK ++G T
Sbjct: 93 IHFGGLIGRYANRIGNAKFSLDGKTYNLEKNNGPNSLHSGNPGFDKRVWQVKPLVSKGET 152
Query: 121 PKIVFSYHSTDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKARNKATPVNLAQHSYWNLG 180
K S +G++GFPG LDV V YSL+ + E ++ KAK ++ T VNL HSY+NL
Sbjct: 153 VKASLKLTSPNGDQGFPGKLDVEVIYSLSDQNEFKIEYKAKT-DQPTVVNLTNHSYFNLS 211
Query: 181 GHSSG--DILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPG- 237
G + +L VQ+ A D +PTG+I +V GTP+DF P I I
Sbjct: 212 GAGNNPYGVLDHVVQLNAGRILVTDQNSLPTGEIASVAGTPFDFRMPKAIVKDIRANNQQ 271
Query: 238 -----GYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTG 283
GYD +V+++ S K+ AIV D KS R M++L +P VQ YT
Sbjct: 272 LAYGYGYDQTWVINQ-KSQGKLNLAAIVVDPKSKRTMQVLTTEPSVQMYTA 321
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 107/200 (53%), Gaps = 11/200 (5%)
Query: 287 KEELSVKMKAKARNKATPVNLAQHSYWNL--GGHNSGDILSQEVQIFASSYTPVDDQLIP 344
+ E ++ KAK ++ T VNL HSY+NL G+N +L VQ+ A D +P
Sbjct: 183 QNEFKIEYKAKT-DQPTVVNLTNHSYFNLSGAGNNPYGVLDHVVQLNAGRILVTDQNSLP 241
Query: 345 TGKIETVEGTPYDFLQPHAIGSSIDK------LPVGYDINYVLDKDDSSKKMRKVAIVHD 398
TG+I +V GTP+DF P AI I GYD +V+++ S K+ AIV D
Sbjct: 242 TGEIASVAGTPFDFRMPKAIVKDIRANNQQLAYGYGYDQTWVINQK-SQGKLNLAAIVVD 300
Query: 399 KKSGRVMELLADQPGVQYYTGGQI-KEVRGKGGFVYKKHAGLCLETQAFPDSVNHPNFPN 457
KS R M++L +P VQ YT + + G G +Y++ L LETQ FPDS N P FP+
Sbjct: 301 PKSKRTMQVLTTEPSVQMYTADHLLGNIVGANGVLYRQADALALETQHFPDSPNQPTFPS 360
Query: 458 TIVYPGEKYKHHMLYKFSTK 477
T + P + Y ++KF +
Sbjct: 361 TRLNPNQTYNSVTVFKFGVQ 380
>sp|P0A9C4|GALM_SHIFL Aldose 1-epimerase OS=Shigella flexneri GN=galM PE=3 SV=1
Length = 346
Score = 162 bits (410), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 144/267 (53%), Gaps = 13/267 (4%)
Query: 22 VKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTL 81
V +WGAT++S +P DG V + +LG S + Y++ + G+ +GR ANRI +++T
Sbjct: 28 VTLMDWGATLLSARIPLSDGSVREALLGCASPECYQDQAAFLGASIGRYANRIANSRYTF 87
Query: 82 DGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHSTDGEEGFPGDLD 141
DG L ++ N LHGGP+GF W++ + +++F+ S DG++GFPG+L
Sbjct: 88 DGETVTLSPSQGVNQLHGGPEGFDKRRWQIVNQNDR----QVLFALSSDDGDQGFPGNLG 143
Query: 142 VTVSYSLTSEKELSVKMKAKARNKATPVNLAQHSYWNLGGHSSGDILSQEVQIFASSYTP 201
TV Y LT + +S+ +A +K PVN+ H Y+NL G S D+ + ++QI A Y P
Sbjct: 144 ATVQYRLTDDNRISITYRATV-DKPCPVNMTNHVYFNLDGEQS-DVRNHKLQILADEYLP 201
Query: 202 VDDQLIPTGKIETVEGTPYDFLQPHTIGSSI-----DKLPGGYDINYVLDKDDSSKKMRK 256
VD+ IP +++V GT +DF I S + GYD ++L KK+
Sbjct: 202 VDEGGIPHDGLKSVAGTSFDFRSAKIIASEFLADDDQRKVKGYDHAFLLQAKGDGKKVAA 261
Query: 257 VAIVHDKKSGRVMELLADQPGVQYYTG 283
D+K +++ P +Q+Y+G
Sbjct: 262 HVWSADEK--LQLKVYTTAPALQFYSG 286
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 97/193 (50%), Gaps = 11/193 (5%)
Query: 289 ELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKI 348
+S+ +A +K PVN+ H Y+NL G S D+ + ++QI A Y PVD+ IP +
Sbjct: 155 RISITYRATV-DKPCPVNMTNHVYFNLDGEQS-DVRNHKLQILADEYLPVDEGGIPHDGL 212
Query: 349 ETVEGTPYDFLQPHAIGSSI----DKLPV-GYDINYVLDKDDSSKKMRKVAIVHDKKSGR 403
++V GT +DF I S D+ V GYD ++L KK+ D+K
Sbjct: 213 KSVAGTSFDFRSAKIIASEFLADDDQRKVKGYDHAFLLQAKGDGKKVAAHVWSADEK--L 270
Query: 404 VMELLADQPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQAFPDSVNHPNF--PNTIVY 461
+++ P +Q+Y+G + +G Y GL LE++ PDS NHP + P+ +
Sbjct: 271 QLKVYTTAPALQFYSGNFLGGTPSRGTEPYADWQGLALESEFLPDSPNHPEWPQPDCFLR 330
Query: 462 PGEKYKHHMLYKF 474
PGE+Y Y+F
Sbjct: 331 PGEEYSSLTEYQF 343
>sp|P0A9C3|GALM_ECOLI Aldose 1-epimerase OS=Escherichia coli (strain K12) GN=galM PE=1
SV=1
Length = 346
Score = 162 bits (410), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 144/267 (53%), Gaps = 13/267 (4%)
Query: 22 VKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTL 81
V +WGAT++S +P DG V + +LG S + Y++ + G+ +GR ANRI +++T
Sbjct: 28 VTLMDWGATLLSARIPLSDGSVREALLGCASPECYQDQAAFLGASIGRYANRIANSRYTF 87
Query: 82 DGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHSTDGEEGFPGDLD 141
DG L ++ N LHGGP+GF W++ + +++F+ S DG++GFPG+L
Sbjct: 88 DGETVTLSPSQGVNQLHGGPEGFDKRRWQIVNQNDR----QVLFALSSDDGDQGFPGNLG 143
Query: 142 VTVSYSLTSEKELSVKMKAKARNKATPVNLAQHSYWNLGGHSSGDILSQEVQIFASSYTP 201
TV Y LT + +S+ +A +K PVN+ H Y+NL G S D+ + ++QI A Y P
Sbjct: 144 ATVQYRLTDDNRISITYRATV-DKPCPVNMTNHVYFNLDGEQS-DVRNHKLQILADEYLP 201
Query: 202 VDDQLIPTGKIETVEGTPYDFLQPHTIGSSI-----DKLPGGYDINYVLDKDDSSKKMRK 256
VD+ IP +++V GT +DF I S + GYD ++L KK+
Sbjct: 202 VDEGGIPHDGLKSVAGTSFDFRSAKIIASEFLADDDQRKVKGYDHAFLLQAKGDGKKVAA 261
Query: 257 VAIVHDKKSGRVMELLADQPGVQYYTG 283
D+K +++ P +Q+Y+G
Sbjct: 262 HVWSADEK--LQLKVYTTAPALQFYSG 286
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 97/193 (50%), Gaps = 11/193 (5%)
Query: 289 ELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKI 348
+S+ +A +K PVN+ H Y+NL G S D+ + ++QI A Y PVD+ IP +
Sbjct: 155 RISITYRATV-DKPCPVNMTNHVYFNLDGEQS-DVRNHKLQILADEYLPVDEGGIPHDGL 212
Query: 349 ETVEGTPYDFLQPHAIGSSI----DKLPV-GYDINYVLDKDDSSKKMRKVAIVHDKKSGR 403
++V GT +DF I S D+ V GYD ++L KK+ D+K
Sbjct: 213 KSVAGTSFDFRSAKIIASEFLADDDQRKVKGYDHAFLLQAKGDGKKVAAHVWSADEK--L 270
Query: 404 VMELLADQPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQAFPDSVNHPNF--PNTIVY 461
+++ P +Q+Y+G + +G Y GL LE++ PDS NHP + P+ +
Sbjct: 271 QLKVYTTAPALQFYSGNFLGGTPSRGTEPYADWQGLALESEFLPDSPNHPEWPQPDCFLR 330
Query: 462 PGEKYKHHMLYKF 474
PGE+Y Y+F
Sbjct: 331 PGEEYSSLTEYQF 343
>sp|P31765|GALM_HAEIN Aldose 1-epimerase OS=Haemophilus influenzae (strain ATCC 51907 /
DSM 11121 / KW20 / Rd) GN=galM PE=3 SV=2
Length = 340
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/270 (34%), Positives = 149/270 (55%), Gaps = 23/270 (8%)
Query: 22 VKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTL 81
V+F +WGAT +S +P D + +V+LG VD+Y +Y G+ VGR ANRI AQF L
Sbjct: 28 VQFMDWGATWLSCKVPVND-TLREVLLGC-KVDNYPTHQSYLGASVGRYANRIANAQFEL 85
Query: 82 DGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHSTDGEEGFPGDLD 141
+G KL +N+ + LHGG +GF W ++ E + FS HS DG++GFPG++D
Sbjct: 86 NGELIKLSSNQGKHQLHGG-EGFDKRRWNIQ----ECGENFVCFSLHSVDGDQGFPGNVD 140
Query: 142 VTVSYSLTSEKELSVKMKAKARNKATPVNLAQHSYWNLGGHSSG-DILSQEVQIFASSYT 200
V+V+Y+LT + + ++ A +K T +NL H+Y+NL G D+ +++ A Y
Sbjct: 141 VSVTYTLTGDNSVKIEY-AGMCDKDTALNLTNHTYFNLENAEQGSDVREHTLRLNADFYL 199
Query: 201 PVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPG------GYDINYVLDKDDSSKKM 254
PVD++ IP ++ V T +DF I D L G GYD +++++ K
Sbjct: 200 PVDNEGIPNSPLKHVVNTSFDFRIAKPIKQ--DFLQGDQQATKGYDHSFIVN-----KAW 252
Query: 255 RKVAIVHDKKSGRV-MELLADQPGVQYYTG 283
+K ++ +G + +E+ Q +Q YTG
Sbjct: 253 QKPCVLLTSPTGDLSLEVRTSQAALQVYTG 282
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 94/193 (48%), Gaps = 14/193 (7%)
Query: 291 SVKMK-AKARNKATPVNLAQHSYWNLGGHNSG-DILSQEVQIFASSYTPVDDQLIPTGKI 348
SVK++ A +K T +NL H+Y+NL G D+ +++ A Y PVD++ IP +
Sbjct: 152 SVKIEYAGMCDKDTALNLTNHTYFNLENAEQGSDVREHTLRLNADFYLPVDNEGIPNSPL 211
Query: 349 ETVEGTPYDFLQPHAIGSSI----DKLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGRV 404
+ V T +DF I + GYD +++++K +K ++ +G +
Sbjct: 212 KHVVNTSFDFRIAKPIKQDFLQGDQQATKGYDHSFIVNK-----AWQKPCVLLTSPTGDL 266
Query: 405 -MELLADQPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQAFPDSVNHPNFPN--TIVY 461
+E+ Q +Q YTG + + G +Y +G+ LETQ PD+ NHP + N I
Sbjct: 267 SLEVRTSQAALQVYTGNYLAGTPTRNGELYADFSGIALETQCLPDTPNHPEWQNYGGIQK 326
Query: 462 PGEKYKHHMLYKF 474
G +Y +KF
Sbjct: 327 AGGRYYQWTEFKF 339
>sp|P21955|GALM_STRTR Aldose 1-epimerase OS=Streptococcus thermophilus GN=galM PE=3 SV=1
Length = 348
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 141/265 (53%), Gaps = 9/265 (3%)
Query: 28 GATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTLDGTHYK 87
GAT+ +P + G + ++VLG+ +DY + +GRVA RIG A +T + Y
Sbjct: 35 GATLQEFLVPMETGALKNIVLGFSDFEDYYKNNLCACQSIGRVAGRIGKASYTHNMVLYS 94
Query: 88 LVANEKSNMLHGGPKGFSDVIWKVKTYENEG--PTPKIVFSYHSTDGEEGFPGDLDVTVS 145
L NE N LHGGPKG W T N+ T I Y S D GFPGD+ V++S
Sbjct: 95 LPKNEGDNCLHGGPKGMQVQNWNYVTNLNDDYVETKFIRRLYSSVD---GFPGDVTVSIS 151
Query: 146 YSLTSEKELSVKMKAKARNKATPVNLAQHSYWNLGGHSSGDILSQEVQIFASSYTPVDDQ 205
Y L + L++ +A ++T N H Y+NL D+ S E+QI++ +D +
Sbjct: 152 YRLNNNNRLTILFEAFDVTESTVFNPTNHVYFNLSDKQ--DLSSHELQIYSDYRLELDSE 209
Query: 206 LIPTGKIETVEGTPYDFLQPHTIGSSIDKLPGGYDINYVLDKDDSSKKMRKVAIVHDKKS 265
LIPTG+ V+ T YDF + + I+ G+D +V+ + +++VAI+HDK+S
Sbjct: 210 LIPTGQKINVDETNYDFRKTTDLLPRIEA-NNGFDDAFVV-GGGTCDHVKEVAILHDKES 267
Query: 266 GRVMELLADQPGVQYYTGGQIKEEL 290
G +E+ +++ G+ +T I++ +
Sbjct: 268 GDGIEIFSNRNGLVIFTMDDIEDNI 292
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 103/194 (53%), Gaps = 9/194 (4%)
Query: 289 ELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKI 348
L++ +A ++T N H Y+NL + D+ S E+QI++ +D +LIPTG+
Sbjct: 159 RLTILFEAFDVTESTVFNPTNHVYFNLS--DKQDLSSHELQIYSDYRLELDSELIPTGQK 216
Query: 349 ETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELL 408
V+ T YDF + + I+ G+D +V+ + +++VAI+HDK+SG +E+
Sbjct: 217 INVDETNYDFRKTTDLLPRIEA-NNGFDDAFVV-GGGTCDHVKEVAILHDKESGDGIEIF 274
Query: 409 ADQPGVQYYTGGQIKE----VRGKGGFVYKKHAGLCLETQAFPDSVNHPNFPNTIVYPGE 464
+++ G+ +T I++ R KG ++ A + +E Q PD+VNH F + I+ G
Sbjct: 275 SNRNGLVIFTMDDIEDNIYFARDKGKMAKRREA-IAMEAQTLPDAVNHKGFGDIILDKGH 333
Query: 465 KYKHHMLYKFSTKS 478
+ + +++ S
Sbjct: 334 SVNYEIGFQYFNSS 347
>sp|P04397|GAL10_YEAST Bifunctional protein GAL10 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=GAL10 PE=1 SV=2
Length = 699
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 139/292 (47%), Gaps = 31/292 (10%)
Query: 9 EVKFYELKKGD-FSVKFTNWGATIVSVFLPDKDGKVD--DVVLGYDSVDDYKN-DTTYFG 64
+ +F + G F F N GA+IV D KV+ VVLGY++ + Y N D+ Y G
Sbjct: 372 DARFVTIGAGTRFQATFANLGASIV-------DLKVNGQSVVLGYENEEGYLNPDSAYIG 424
Query: 65 SVVGRVANRIGGAQFTLDGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIV 124
+ +GR ANRI +F+L Y+L N N H F + +N K V
Sbjct: 425 ATIGRYANRISKGKFSLCNKDYQLTVNNGVNANHSSIGSFHRKRFLGPIIQNPS---KDV 481
Query: 125 FS--YHSTDGEEG--FPGDLDVTVSYSL-TSEKELSVKMKAK-ARNKATPVNLAQHSYWN 178
F+ Y D E+ FPGDL VT+ Y++ ++K L + K K +ATP+NL HSY+N
Sbjct: 482 FTAEYMLIDNEKDTEFPGDLLVTIQYTVNVAQKSLEMVYKGKLTAGEATPINLTNHSYFN 541
Query: 179 LGGHSSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPGG 238
L I E+ + + VD +IPTG I E ++ +P +G K P
Sbjct: 542 LNKPYGDTIEGTEIMVRSKKSVDVDKNMIPTGNIVDREIATFNSTKPTVLGP---KNP-Q 597
Query: 239 YDINYVLDKDDS-------SKKMRKVAIVHDKKSGRVMELLADQPGVQYYTG 283
+D +V+D++ + ++ + S +E+L+ +P Q+YTG
Sbjct: 598 FDCCFVVDENAKPSQINTLNNELTLIVKAFHPDSNITLEVLSTEPTYQFYTG 649
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 281 YTGGQIKEELSVKMKAK-ARNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVD 339
YT ++ L + K K +ATP+NL HSY+NL I E+ + + VD
Sbjct: 507 YTVNVAQKSLEMVYKGKLTAGEATPINLTNHSYFNLNKPYGDTIEGTEIMVRSKKSVDVD 566
Query: 340 DQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDS-------SKKMRK 392
+IPTG I E ++ +P +G K P +D +V+D++ + ++
Sbjct: 567 KNMIPTGNIVDREIATFNSTKPTVLGP---KNP-QFDCCFVVDENAKPSQINTLNNELTL 622
Query: 393 VAIVHDKKSGRVMELLADQPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQAFPDSVNH 452
+ S +E+L+ +P Q+YTG + G Y+ G +E + D++N
Sbjct: 623 IVKAFHPDSNITLEVLSTEPTYQFYTG----DFLSAG---YEARQGFAIEPGRYIDAINQ 675
Query: 453 PNFPNTIVYP-GEKYKHHMLYKFS 475
N+ + + GE Y ++Y+FS
Sbjct: 676 ENWKDCVTLKNGETYGSKIVYRFS 699
>sp|P40801|GAL10_PACTA Bifunctional protein GAL10 OS=Pachysolen tannophilus GN=GAL10 PE=2
SV=1
Length = 689
Score = 105 bits (263), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 139/287 (48%), Gaps = 39/287 (13%)
Query: 18 GDFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDY-KNDTTYFGSVVGRVANRIGG 76
G F V +N GATIV+ L + LG+D++ Y + D +FG+ +GRVANRI
Sbjct: 372 GKFEVSISNHGATIVAAKLNGIK-----LNLGFDNLKGYLREDNPFFGATIGRVANRISK 426
Query: 77 AQFTLDGTHYKLVANE-KSNMLHGGPKGFSDVIWK---VKTYENEGPTPKIVFSYHSTDG 132
++GTHY++ NE LHGG G++ + VKT E E T + F DG
Sbjct: 427 GDLLINGTHYQVGLNELHRTSLHGGTYGYNKRTFLGPIVKTNEKEKET-TMEFVLIDLDG 485
Query: 133 EEGFPGDLDVTVSYSLTSE---KELSVKMKAKARNK----ATPVNLAQHSYWNLGGHSSG 185
EG+PGD++ V Y++ EL ++ +AK + +T V+L HSYWN+G S
Sbjct: 486 TEGYPGDVETKVIYTVRDTGVGGELGIEYEAKLLEESGRDSTAVSLTNHSYWNIGNQPS- 544
Query: 186 DILSQEVQIFASSY---TPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPGG--YD 240
I +++ ++ + P+D PTGKI V T D +G P G +D
Sbjct: 545 -IEGTHIKLVSNKHLESNPLDST--PTGKI--VTSTDLDSQNSAKLG------PDGPVFD 593
Query: 241 INYVLDKDD----SSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTG 283
+V + D + ++R VA K+ L +P Q+YTG
Sbjct: 594 YCFVTKQQDKLDTRNDELRVVATATHPKTRIAFTTLTTEPAFQFYTG 640
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 92/199 (46%), Gaps = 26/199 (13%)
Query: 283 GGQIKEELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSY---TPVD 339
GG++ E K+ ++ +T V+L HSYWN+G N I +++ ++ + P+D
Sbjct: 507 GGELGIEYEAKLLEESGRDSTAVSLTNHSYWNIG--NQPSIEGTHIKLVSNKHLESNPLD 564
Query: 340 DQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDD----SSKKMRKVAI 395
PTGKI V T D +G PV +D +V + D + ++R VA
Sbjct: 565 ST--PTGKI--VTSTDLDSQNSAKLGPD---GPV-FDYCFVTKQQDKLDTRNDELRVVAT 616
Query: 396 VHDKKSGRVMELLADQPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQAFPDSVNHPNF 455
K+ L +P Q+YTG + +V G V+ K +G CLE + + +P +
Sbjct: 617 ATHPKTRIAFTTLTTEPAFQFYTGDGV-DVAG----VFTKRSGFCLEASRY---IYNPKW 668
Query: 456 PNTIVYPGEKYKHHMLYKF 474
+ GE Y + +Y+F
Sbjct: 669 -FIPLNKGEVYGSYTIYRF 686
>sp|P53757|YN9A_YEAST Uncharacterized isomerase YNR071C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YNR071C PE=1 SV=1
Length = 342
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 125/285 (43%), Gaps = 29/285 (10%)
Query: 20 FSVKFTNWGATIVSVFLPDKDGKVD--DVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGA 77
F GAT+V D KV+ VV GY +V DY D G+ VGR ANRI
Sbjct: 21 FQATIAPLGATLV-------DLKVNGQSVVQGYSNVQDYLTDGNMMGATVGRYANRIAKG 73
Query: 78 QFTLDGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIV----FSYHSTDGE 133
F+LD +KL N N H + +K EN +V H+
Sbjct: 74 VFSLDDGPHKLTVNNCGNTNHSSISSLNLKQYKASPVENPSKGVYVVEFKLLDDHTQPNP 133
Query: 134 EGFPGDLDVTVSYSL-TSEKELSVKMKAK-ARNKATPVNLAQHSYWNLGG-HSSGDILSQ 190
FPGDL+VTV Y+L +E L ++ +A+ R ATP+N+ HSY+NL S I
Sbjct: 134 NEFPGDLEVTVKYTLNVAEMTLDMEYQAQLVRGDATPINMTNHSYFNLNKVKSEKSIRGT 193
Query: 191 EVQIFASSYTPVDD-QLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPGGYDINYVLDKDD 249
EV++ ++ V + L+PTGKI +D +P + +D +++D +
Sbjct: 194 EVKVCSNKSLEVTEGALLPTGKIIERNIATFDSTKPTVLHEDTPV----FDCTFIIDANK 249
Query: 250 SSKKMRKVAI--------VHDKKSGRVMELLADQPGVQYYTGGQI 286
K V++ + +S E+ +P V YTG +
Sbjct: 250 DLKTTDSVSVNKLVPVFKAYHPESHIKFEVSTTEPTVHLYTGDNL 294
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 25/200 (12%)
Query: 289 ELSVKMKAKA---RNKATPVNLAQHSYWNLGGHNS-GDILSQEVQIFASSYTPVDD-QLI 343
E+++ M+ +A R ATP+N+ HSY+NL S I EV++ ++ V + L+
Sbjct: 152 EMTLDMEYQAQLVRGDATPINMTNHSYFNLNKVKSEKSIRGTEVKVCSNKSLEVTEGALL 211
Query: 344 PTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKMRKVAI-------- 395
PTGKI +D +P + + PV +D +++D + K V++
Sbjct: 212 PTGKIIERNIATFDSTKPTVLH---EDTPV-FDCTFIIDANKDLKTTDSVSVNKLVPVFK 267
Query: 396 VHDKKSGRVMELLADQPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQAFPDSVNHPNF 455
+ +S E+ +P V YTG + G FV + +G ++ + D++N +
Sbjct: 268 AYHPESHIKFEVSTTEPTVHLYTGDNL-----CGKFVPR--SGFAVQQGRYVDAINRDEW 320
Query: 456 PNTIVYP-GEKYKHHMLYKF 474
++ GE Y YKF
Sbjct: 321 RGCVLLKRGEVYTSKTQYKF 340
>sp|Q9HDU3|GAL10_SCHPO Bifunctional protein gal10 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=gal10 PE=3 SV=1
Length = 713
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 128/285 (44%), Gaps = 41/285 (14%)
Query: 19 DFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYK-NDTTYFGSVVGRVANRIGGA 77
D V N+GA + +V ++ +V G++ YK + +FG+ +GR ANRI
Sbjct: 377 DLEVSIANYGALVQAVRYKGRN-----LVNGFNDFSRYKLKENPFFGATIGRFANRIANG 431
Query: 78 QFTLDGTHYKLVANEKS-NMLHGGPKGFSDVIWK---VKTYENEGPTPKIVFSYHSTDGE 133
QF +DG Y L NE + LHGG GF + + YE+ I+ DG
Sbjct: 432 QFEVDGHLYTLCKNENNKTTLHGGNNGFDKQFFLGPIARQYEDYNTLEFILV---DKDGN 488
Query: 134 EGFPGDLDVTVSYSLTS---EKELSVKMKAKARNKATPVNLAQHSYWNLGGHSS---GDI 187
GFP DL+ V Y++ + E E + ++ T VNL HSYWNL + G I
Sbjct: 489 NGFPSDLETLVKYTIKNNSLEIEYKSVIPEYSKLNVTAVNLTNHSYWNLASPNKTIDGTI 548
Query: 188 LSQEVQIFASSYTPVDDQL-IPTGKIETVEGTPYDFLQPHTIGSSIDKLPGGYDINYVLD 246
+ + Y V+ + +PTG I + D +P + +I +D +++D
Sbjct: 549 IKSTTNV----YLKVNSETSLPTGDIVEWQN---DITKPTKLDPNI-----SFDNCFIVD 596
Query: 247 KDDSSKKM--RK------VAIVHDKKSGRVMELLADQPGVQYYTG 283
++ S + RK V ++H +++ + +P Q YTG
Sbjct: 597 REASKFCLDTRKYSLKNIVEVIHPSVPVKLV-VSTTEPAFQLYTG 640
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 36/180 (20%)
Query: 302 ATPVNLAQHSYWNLGGHNS---GDILSQEVQIFASSYTPVDDQL-IPTGKIETVEGTPYD 357
T VNL HSYWNL N G I+ + Y V+ + +PTG I + D
Sbjct: 524 VTAVNLTNHSYWNLASPNKTIDGTIIKSTTNV----YLKVNSETSLPTGDIVEWQN---D 576
Query: 358 FLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKM--RK------VAIVHDKKSGRVMELLA 409
+P + +I +D +++D++ S + RK V ++H +++ +
Sbjct: 577 ITKPTKLDPNI-----SFDNCFIVDREASKFCLDTRKYSLKNIVEVIHPSVPVKLV-VST 630
Query: 410 DQPGVQYYT--GGQIKEVRGKGGFVYKKHAGLCLETQAFPDSVNHPNFP-NTIVYPGEKY 466
+P Q YT G I E + + GF C+ET F +++N+ + I+ GE Y
Sbjct: 631 TEPAFQLYTGDGNDICEFQSRSGF--------CVETGRFINALNNEKWSKQVILRKGEVY 682
>sp|P09609|GAL10_KLULA Bifunctional protein GAL10 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=GAL10 PE=2 SV=2
Length = 688
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 134/300 (44%), Gaps = 34/300 (11%)
Query: 16 KKGDFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTT-YFGSVVGRVANRI 74
K F VK N GATIV + + VV D+ +YK+ + +FG+ VG ANRI
Sbjct: 369 KGTSFEVKLANLGATIVDIVVNGCS-----VVASLDNETEYKDQSNPFFGATVGPYANRI 423
Query: 75 GGAQFTLDGTHYKL-VANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKI-VFSYHSTDG 132
F ++G +L V+ E N++H G + + +N P I + D
Sbjct: 424 ANGTFEINGKRIQLTVSKEDGNVVHSGINSYHSKKFLGPIVKN--PEAHIWTADFKYVDE 481
Query: 133 EEGFPGDLDVTVSYSLTSEKE-LSVKMKAK-ARNKATPVNLAQHSYWNLGGHSSGDILSQ 190
E FP L V Y + SEK+ L+V+ ++K A +T N+ H+Y+NL + I
Sbjct: 482 ETEFPARLSTLVRYKVDSEKKTLTVEYESKVAGQGSTGANITNHTYFNLNKFNEATIKGS 541
Query: 191 EVQIFASSYTPVDDQLIPTG------KIETVEGTPYDFL--QPHTIGSSIDKLPGGYDIN 242
+VQ+ ++ V+++L+PTG ++ T +P + +P + LP D
Sbjct: 542 KVQLIDNTGLEVNNKLLPTGNLKKYTQVATFNDSPTEITEKEPVLDFCFVSGLPAKLDTR 601
Query: 243 YVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKA 302
S + V + ++ + +E+ +P Q YTG V +K K N+A
Sbjct: 602 --------SSPLTPVFKLSNEDAKLEVEVATTEPTFQVYTGDY------VDVKDKYENRA 647
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 98/200 (49%), Gaps = 23/200 (11%)
Query: 287 KEELSVKMKAK-ARNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPT 345
K+ L+V+ ++K A +T N+ H+Y+NL N I +VQ+ ++ V+++L+PT
Sbjct: 501 KKTLTVEYESKVAGQGSTGANITNHTYFNLNKFNEATIKGSKVQLIDNTGLEVNNKLLPT 560
Query: 346 G------KIETVEGTPYDFLQPHAI--GSSIDKLPVGYDINYVLDKDDSSKKMRKVAIVH 397
G ++ T +P + + + + LP D S + V +
Sbjct: 561 GNLKKYTQVATFNDSPTEITEKEPVLDFCFVSGLPAKLDTR--------SSPLTPVFKLS 612
Query: 398 DKKSGRVMELLADQPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQAFPDSVNHPNFPN 457
++ + +E+ +P Q YTG + +V+ K Y+ AG+C E + D+VN+P + +
Sbjct: 613 NEDAKLEVEVATTEPTFQVYTGDYV-DVKDK----YENRAGICCEPGRYIDAVNNPEWKS 667
Query: 458 TIVYP-GEKYKHHMLYKFST 476
++V P GE Y H + Y F T
Sbjct: 668 SVVLPAGETYGHKLSYTFRT 687
>sp|P38893|YH10_YEAST Uncharacterized isomerase YHR210C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YHR210C PE=3 SV=1
Length = 341
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 129/277 (46%), Gaps = 25/277 (9%)
Query: 29 ATIVSVFLPDKDGKVDD--VVLGYDSVDDYKND-TTYFGSVVGRVANRIGGAQFTLDGTH 85
ATI + D KV++ +VLGY + Y +D Y G+ VGR ANRI F+++
Sbjct: 23 ATISELGATLLDLKVNNESIVLGYPDIHGYISDGYNYIGATVGRYANRIYKGMFSMEDGP 82
Query: 86 YKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKI-VFSYHSTDGE---EGFPGDLD 141
++L N N H F + K K + + P + + + D FPGDL
Sbjct: 83 HQLTVNNCGNTNHSSISSFH--LKKYKASKVQNPLDDLYIVEFTLLDDRTLPNEFPGDLA 140
Query: 142 VTVSYSL-TSEKELSVKMKAK-ARNKATPVNLAQHSYWNLG-GHSSGDILSQEVQIFASS 198
V + Y+L ++ L ++ +AK +ATP+N+ H+Y+NL I EV++ +
Sbjct: 141 VNLKYTLNVADMTLDLEYEAKLVSGEATPINMTNHTYFNLNKTMDKKSISGTEVRLCSDK 200
Query: 199 YTPVDD-QLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPGGYDINYVLDKDDSSKKMRKV 257
V + LIPTGKI + +D +P + D P YD +++D++ + K V
Sbjct: 201 SLEVSEGALIPTGKIVQRKIATFDSSKPTILQ---DDGP-IYDYAFIVDENKNLKTTDSV 256
Query: 258 AI--------VHDKKSGRVMELLADQPGVQYYTGGQI 286
++ + S +E+ +P V +YTG +
Sbjct: 257 SVNKLVPAFKAYHPASRLSLEVSTTEPTVLFYTGDNL 293
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 95/207 (45%), Gaps = 23/207 (11%)
Query: 281 YTGGQIKEELSVKMKAK-ARNKATPVNLAQHSYWNLG-GHNSGDILSQEVQIFASSYTPV 338
YT L ++ +AK +ATP+N+ H+Y+NL + I EV++ + V
Sbjct: 145 YTLNVADMTLDLEYEAKLVSGEATPINMTNHTYFNLNKTMDKKSISGTEVRLCSDKSLEV 204
Query: 339 DD-QLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKMRKVAI-- 395
+ LIPTGKI + +D +P + D P+ YD +++D++ + K V++
Sbjct: 205 SEGALIPTGKIVQRKIATFDSSKPTILQ---DDGPI-YDYAFIVDENKNLKTTDSVSVNK 260
Query: 396 ------VHDKKSGRVMELLADQPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQAFPDS 449
+ S +E+ +P V +YTG + + GF +G +E + D+
Sbjct: 261 LVPAFKAYHPASRLSLEVSTTEPTVLFYTGDNLCD-----GFT--PRSGFAVEQGRYVDA 313
Query: 450 VNHPNFPNTIVY-PGEKYKHHMLYKFS 475
+N + + ++ GE Y Y+F+
Sbjct: 314 INRDGWRDCVLLRRGEVYTSKTRYRFA 340
>sp|Q00053|GALM_LACHE Aldose 1-epimerase (Fragment) OS=Lactobacillus helveticus GN=galM
PE=3 SV=1
Length = 129
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 22 VKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTL 81
VK N+GAT+ V L D ++++L +S DY + Y G VGR+A R+ Q+
Sbjct: 29 VKVLNYGATLEKVLLND-----ENMILSLNSPADYSQERNYLGGTVGRIAGRVRKGQWRH 83
Query: 82 DGTHYKLVANEKSNMLHGGPKGFSDVIWKVK 112
++L N+ N +HGG G +W K
Sbjct: 84 GLETHQLPINDGENHIHGGI-GTDTEVWDFK 113
>sp|P39840|GALM_BACSU Aldose 1-epimerase OS=Bacillus subtilis (strain 168) GN=galM PE=1
SV=2
Length = 325
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 85/200 (42%), Gaps = 29/200 (14%)
Query: 27 WGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTLDGTHY 86
WG+ ++S L DK V ++ ++ + + + T +G + NRI F+ G Y
Sbjct: 31 WGSNVIS--LVDKTTNVQ-LLREPETAESFHDTPTLYGIPILFPPNRISDGTFSFRGRTY 87
Query: 87 KLVANE--KSNMLHGGPKGFSDVIWKVKTYE--NEGPTPKIVFSYHSTDG-EEGFPGDLD 141
NE K N LHG W V T + +EG + ++ FP
Sbjct: 88 HFDINEKDKHNHLHG---FLYHEKWNVVTTKQTDEGVIVETEIDLSELPHVQKQFPHHAV 144
Query: 142 VTVSYSLTSEKELSVKMKAKARNK---ATPVNLAQHSYWNLGGHSSGDILSQEVQIF--- 195
V ++Y++ KE ++ A NK A P W +G H++ I E +F
Sbjct: 145 VRMTYTI---KENTLFKHATVMNKGKEAFP--------WGIGYHTTF-IFPAESSLFSLT 192
Query: 196 ASSYTPVDDQLIPTGKIETV 215
A +D++L+PTGK+ V
Sbjct: 193 ADQQWELDERLLPTGKLMDV 212
>sp|P32139|YIHR_ECOLI Uncharacterized protein YihR OS=Escherichia coli (strain K12)
GN=yihR PE=4 SV=1
Length = 308
Score = 37.0 bits (84), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 99/233 (42%), Gaps = 31/233 (13%)
Query: 62 YFGSVVGRVANRIGGAQFTLDGTHYKLVANEKSN--MLHGGPKGFSDVIWKVK--TYENE 117
+ G V+ NRI + G Y+L NE S+ +HG + D W++ T +
Sbjct: 62 HLGKVLIPWPNRIANGCYRYQGQEYQLPINEHSSKAAIHGL-LAWRD--WQISELTATSV 118
Query: 118 GPTPKIVFSYHSTDGEEGFPGDLDVTVSYSLTSEKELSVKMKAK-ARNKATPVNLAQHSY 176
T + SY G+P L V YSL + LSV++ ++ A P + H Y
Sbjct: 119 TLTAFLPPSY-------GYPFMLASQVVYSLNAHTGLSVEIASQNIGTVAAPYGVGIHPY 171
Query: 177 WNLGGHSSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLP 236
S + L Q+ A+ VD+ PT + V+ +F Q I ++
Sbjct: 172 LTCNLTSVDEYL---FQLPANQVYAVDEHANPT-TLHHVDELDLNFTQAKKIAAT----- 222
Query: 237 GGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEE 289
I++ ++ + ++ I H +++ V L +DQ VQ Y+G +++ +
Sbjct: 223 ---KIDHTF---KTANDLWEMTITHPQQALSV-SLCSDQLWVQVYSGEKLQRQ 268
>sp|Q89277|POLG_YEFVF Genome polyprotein OS=Yellow fever virus (strain French neurotropic
vaccine FNV) PE=3 SV=2
Length = 3411
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%)
Query: 28 GATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTLDGTHYK 87
ATI + L D++G + + G V ND + G V+ R+ + TL GT YK
Sbjct: 524 AATIRVLALGDQEGSLKTALTGAMRVTKDTNDNNLYKLHGGHVSCRVKLSALTLKGTSYK 583
Query: 88 LVANEKSNMLHGGPKGFSDVIWKVKT 113
+ ++ S + + G V+ +VK
Sbjct: 584 MCTDKMSFVKNPTDTGHGTVVMQVKV 609
>sp|P00487|CAT_BACPU Chloramphenicol acetyltransferase OS=Bacillus pumilus GN=cat86 PE=2
SV=1
Length = 220
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 15/102 (14%)
Query: 139 DLDVTVSYSLTSEKELSVK-----MKAKARNKATPVNLAQHS----YWNLGGHSSGDILS 189
+LD+T +++ EK+L V + A+A K + Q + YW + H S IL+
Sbjct: 31 NLDITKLHAILKEKKLKVYPVQIYLLARAVQKIPEFRMDQVNDELGYWEIL-HPSYTILN 89
Query: 190 QEVQIFASSYTPVDDQLIPTGK-----IETVEGTPYDFLQPH 226
+E + F+S +TP D+ K IET + F +PH
Sbjct: 90 KETKTFSSIWTPFDENFAQFYKSCVADIETFSKSSNLFPKPH 131
>sp|Q9YRV3|POLG_YEFVT Genome polyprotein OS=Yellow fever virus (strain
Trinidad/TRINID79A/1979) PE=3 SV=1
Length = 3411
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%)
Query: 28 GATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTLDGTHYK 87
ATI + L D++G + + G V ND + G V+ R+ + TL GT YK
Sbjct: 524 AATIRVLALGDQEGSLKTALTGAMRVTKDTNDNNLYKLHGGHVSCRVKLSALTLKGTSYK 583
Query: 88 LVANEKSNMLHGGPKGFSDVIWKVKT 113
+ ++ S + + G V+ +VK
Sbjct: 584 MCTDKMSFVKNPTDTGHGTVVMQVKV 609
>sp|Q1X880|POLG_YEFVU Genome polyprotein OS=Yellow fever virus (isolate
Uganda/A7094A4/1948) PE=3 SV=1
Length = 3412
Score = 33.9 bits (76), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%)
Query: 28 GATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTLDGTHYK 87
ATI + L +++G + + G V +ND + G V+ R+ + TL GT YK
Sbjct: 524 AATIRVLALGNQEGSLKTALTGAMRVTKDENDNNLYKLHGGHVSCRVKLSALTLKGTSYK 583
Query: 88 LVANEKSNMLHGGPKGFSDVIWKVKT 113
+ ++ S + + G V+ +VK
Sbjct: 584 MCTDKMSFVKNPTDTGHGTVVMQVKV 609
>sp|Q074N0|POLG_YEFVE Genome polyprotein OS=Yellow fever virus (isolate
Ethiopia/Couma/1961) PE=3 SV=1
Length = 3412
Score = 33.9 bits (76), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%)
Query: 28 GATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTLDGTHYK 87
ATI + L +++G + + G V +ND + G V+ R+ + TL GT YK
Sbjct: 524 AATIRVLALGNQEGSLKTALTGAMRVTKDENDNNLYKLHGGHVSCRVKLSALTLKGTSYK 583
Query: 88 LVANEKSNMLHGGPKGFSDVIWKVKT 113
+ ++ S + + G V+ +VK
Sbjct: 584 MCTDKMSFVKNPTDTGHGTVVMQVKV 609
>sp|Q1X881|POLG_YEFVN Genome polyprotein OS=Yellow fever virus (isolate Angola/14FA/1971)
PE=3 SV=1
Length = 3412
Score = 33.9 bits (76), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%)
Query: 28 GATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTLDGTHYK 87
ATI + L +++G + + G V +ND + G V+ R+ + TL GT YK
Sbjct: 524 AATIRVLALGNQEGSLKTALTGAMRVTKDENDNNLYKLHGGHVSCRVKLSALTLKGTSYK 583
Query: 88 LVANEKSNMLHGGPKGFSDVIWKVKT 113
+ ++ S + + G V+ +VK
Sbjct: 584 MCTDKMSFVKNPTDTGHGTVVMQVKV 609
>sp|Q6J3P1|POLG_YEFVC Genome polyprotein OS=Yellow fever virus (isolate Ivory Coast/1999)
PE=3 SV=1
Length = 3411
Score = 33.5 bits (75), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%)
Query: 28 GATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTLDGTHYK 87
ATI + L +++G + + G V ND + G V+ R+ + TL GT YK
Sbjct: 524 AATIRVLALGNQEGSLKTALTGAMRVTKDTNDNNLYKLHGGHVSCRVKLSALTLKGTSYK 583
Query: 88 LVANEKSNMLHGGPKGFSDVIWKVKT 113
+ ++ S + + G V+ +VK
Sbjct: 584 MCTDKMSFVKNPTDTGHGTVVMQVKV 609
>sp|Q6DV88|POLG_YEFVA Genome polyprotein OS=Yellow fever virus (strain Ghana/Asibi/1927)
PE=1 SV=1
Length = 3411
Score = 33.5 bits (75), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%)
Query: 28 GATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTLDGTHYK 87
ATI + L +++G + + G V ND + G V+ R+ + TL GT YK
Sbjct: 524 AATIRVLALGNQEGSLKTALTGAMRVTKDTNDNNLYKLHGGHVSCRVKLSALTLKGTSYK 583
Query: 88 LVANEKSNMLHGGPKGFSDVIWKVKT 113
+ ++ S + + G V+ +VK
Sbjct: 584 MCTDKMSFVKNPTDTGHGTVVMQVKV 609
>sp|Q9MA90|PNC1_ARATH Peroxisomal adenine nucleotide carrier 1 OS=Arabidopsis thaliana
GN=PNC1 PE=1 SV=1
Length = 322
Score = 32.7 bits (73), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 271 LLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLAQHSYWNLGG 317
LL P +QY Q+K+ L + AKA N ++PV L+ + LG
Sbjct: 166 LLTSNPAIQYTVFDQLKQHLLKQKNAKAENGSSPVVLSAFMAFVLGA 212
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.134 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 200,050,427
Number of Sequences: 539616
Number of extensions: 9373355
Number of successful extensions: 15872
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 15738
Number of HSP's gapped (non-prelim): 63
length of query: 478
length of database: 191,569,459
effective HSP length: 121
effective length of query: 357
effective length of database: 126,275,923
effective search space: 45080504511
effective search space used: 45080504511
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)