Query 047922
Match_columns 478
No_of_seqs 246 out of 1887
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 04:37:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047922.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047922hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1604 Predicted mutarotase [ 100.0 4.9E-78 1.1E-82 579.8 34.6 332 7-477 17-352 (353)
2 PRK11055 galM galactose-1-epim 100.0 4.6E-76 1E-80 595.5 40.8 334 5-476 4-341 (342)
3 PTZ00485 aldolase 1-epimerase; 100.0 1.4E-75 3.1E-80 593.5 38.5 335 10-476 13-370 (376)
4 TIGR02636 galM_Leloir galactos 100.0 4E-73 8.8E-78 574.5 39.2 330 7-475 1-335 (335)
5 PLN00194 aldose 1-epimerase; P 100.0 7.3E-71 1.6E-75 558.1 42.1 334 5-476 4-337 (337)
6 cd09019 galactose_mutarotase_l 100.0 3.3E-66 7.3E-71 523.3 38.4 325 12-474 1-326 (326)
7 PRK15172 putative aldose-1-epi 100.0 2.8E-55 6.1E-60 438.2 37.5 283 11-474 11-297 (300)
8 COG2017 GalM Galactose mutarot 100.0 1.7E-53 3.6E-58 426.1 35.9 297 5-476 7-307 (308)
9 cd09022 Aldose_epim_Ec_YihR Al 100.0 1.5E-49 3.3E-54 394.7 33.6 275 21-470 2-282 (284)
10 PF01263 Aldose_epim: Aldose 1 100.0 3.3E-46 7.2E-51 373.1 26.2 295 11-473 1-300 (300)
11 cd01081 Aldose_epim aldose 1-e 100.0 3E-40 6.5E-45 326.9 32.3 277 21-469 2-282 (284)
12 cd09021 Aldose_epim_Ec_YphB al 100.0 5.8E-40 1.3E-44 324.2 29.6 260 24-472 5-272 (273)
13 cd09024 Aldose_epim_lacX Aldos 100.0 4.7E-37 1E-41 305.7 32.1 176 13-211 1-182 (288)
14 cd09025 Aldose_epim_Slr1438 Al 100.0 6.6E-34 1.4E-38 280.6 27.2 168 11-203 2-176 (271)
15 cd09020 D-hex-6-P-epi_like D-h 99.9 5.7E-23 1.2E-27 202.4 26.9 154 13-195 2-159 (269)
16 KOG1604 Predicted mutarotase [ 99.8 6.5E-21 1.4E-25 184.8 10.0 116 263-379 128-254 (353)
17 PRK11055 galM galactose-1-epim 99.8 5.6E-19 1.2E-23 179.3 10.9 79 289-368 149-228 (342)
18 PLN00194 aldose 1-epimerase; P 99.8 1.2E-18 2.6E-23 176.9 10.7 81 288-368 150-230 (337)
19 PTZ00485 aldolase 1-epimerase; 99.7 4.9E-17 1.1E-21 165.8 7.2 81 288-368 158-254 (376)
20 cd09019 galactose_mutarotase_l 99.7 3.9E-16 8.4E-21 158.2 10.8 77 288-365 138-214 (326)
21 TIGR02636 galM_Leloir galactos 99.7 2.5E-16 5.4E-21 159.9 9.3 81 288-369 143-224 (335)
22 cd09023 Aldose_epim_Ec_c4013 A 99.6 2.6E-14 5.7E-19 142.0 19.1 103 93-203 69-174 (284)
23 PRK15172 putative aldose-1-epi 99.6 1.6E-15 3.4E-20 151.9 10.3 83 288-380 138-221 (300)
24 COG0676 Uncharacterized enzyme 99.4 2.7E-11 5.9E-16 116.1 16.9 137 12-181 26-164 (287)
25 KOG1594 Uncharacterized enzyme 99.3 4.1E-10 8.9E-15 106.2 19.8 145 10-181 23-175 (305)
26 PF01263 Aldose_epim: Aldose 1 99.2 8.6E-12 1.9E-16 124.6 6.9 86 287-380 133-220 (300)
27 cd09022 Aldose_epim_Ec_YihR Al 99.2 1.8E-11 4E-16 121.7 8.8 111 287-420 117-229 (284)
28 COG2017 GalM Galactose mutarot 99.0 6E-10 1.3E-14 111.9 7.7 60 287-349 142-203 (308)
29 cd01081 Aldose_epim aldose 1-e 99.0 1.1E-09 2.3E-14 108.3 7.0 82 288-380 124-206 (284)
30 cd09021 Aldose_epim_Ec_YphB al 98.9 9.1E-10 2E-14 108.9 6.2 72 287-367 119-191 (273)
31 cd09024 Aldose_epim_lacX Aldos 98.4 4.3E-07 9.3E-12 90.5 7.5 159 287-473 117-287 (288)
32 cd09269 deoxyribose_mutarotase 98.1 4.6E-05 1E-09 75.9 14.4 99 77-179 42-146 (293)
33 cd09025 Aldose_epim_Slr1438 Al 97.8 1.3E-05 2.8E-10 79.2 4.1 137 287-471 128-269 (271)
34 PF14486 DUF4432: Domain of un 97.8 0.0039 8.5E-08 62.6 20.2 232 9-282 3-255 (302)
35 cd09023 Aldose_epim_Ec_c4013 A 95.5 0.02 4.4E-07 56.9 5.4 148 287-469 125-282 (284)
36 PF14315 DUF4380: Domain of un 95.4 0.64 1.4E-05 46.0 15.6 140 10-178 4-147 (274)
37 cd09269 deoxyribose_mutarotase 94.5 0.77 1.7E-05 45.9 13.2 28 288-315 118-146 (293)
38 PF14486 DUF4432: Domain of un 94.4 0.24 5.2E-06 49.8 9.6 152 288-473 141-301 (302)
39 TIGR03593 yidC_nterm membrane 93.4 1.4 3.1E-05 45.3 13.5 28 11-38 74-101 (366)
40 cd09020 D-hex-6-P-epi_like D-h 93.3 0.063 1.4E-06 53.0 3.1 144 287-472 119-268 (269)
41 PF14849 YidC_periplas: YidC p 91.3 3 6.5E-05 40.8 12.2 26 12-37 1-26 (270)
42 KOG1594 Uncharacterized enzyme 90.6 3.6 7.9E-05 39.9 11.2 143 287-471 144-293 (305)
43 PRK01318 membrane protein inse 87.2 13 0.00029 40.2 14.1 27 12-38 40-66 (521)
44 COG0676 Uncharacterized enzyme 81.7 16 0.00035 36.0 10.6 127 286-446 136-264 (287)
45 PF02929 Bgal_small_N: Beta ga 62.3 50 0.0011 32.6 9.2 30 14-48 1-30 (276)
46 PF06045 Rhamnogal_lyase: Rham 50.0 2.3E+02 0.0049 26.8 15.0 34 12-50 17-50 (203)
47 PF05660 DUF807: Coxiella burn 45.6 18 0.00038 31.0 2.4 89 48-147 14-102 (142)
48 PRK10340 ebgA cryptic beta-D-g 33.8 6.6E+02 0.014 29.9 13.7 23 140-162 820-842 (1021)
49 COG3175 COX11 Cytochrome oxida 33.0 77 0.0017 29.2 4.6 46 401-446 83-139 (195)
50 PRK09525 lacZ beta-D-galactosi 29.1 8.1E+02 0.018 29.2 13.4 38 12-54 750-787 (1027)
51 KOG2540 Cytochrome oxidase ass 21.1 1.1E+02 0.0023 29.1 3.4 45 401-445 153-208 (269)
No 1
>KOG1604 consensus Predicted mutarotase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.9e-78 Score=579.79 Aligned_cols=332 Identities=54% Similarity=0.923 Sum_probs=307.3
Q ss_pred CcEEEEEEEEeC-CEEEEEeccCceEEEEEeeCCCCceeeEEecCCChhhccc-CCCcccceeecCCCccCCcEEEECCE
Q 047922 7 SEEVKFYELKKG-DFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKN-DTTYFGSVVGRVANRIGGAQFTLDGT 84 (478)
Q Consensus 7 ~~~~~~~~L~n~-~~~v~v~~~Ga~i~~l~~~d~~G~~~dvv~g~~~~~~y~~-~~~~~G~~lgp~anRI~~g~~~~~G~ 84 (478)
.+.+..|+|.|+ +|+|+|+++||+|+||.+||++|+..||||||++.+.|.. +..|||++|||+||||++|+|.++|+
T Consensus 17 ~~~~~~~tl~n~~~l~vti~~~GATi~sL~vpd~~gk~~DVVLGfd~v~gY~~~~~~yfGatvGRvANRI~~G~F~ldgk 96 (353)
T KOG1604|consen 17 KQTIRVYTLGNGKGLQVTIINLGATITSLKVPDKSGKLDDVVLGFDDVDGYLKDDAAYFGATVGRVANRIAKGKFSLDGK 96 (353)
T ss_pred cCceEEEEecCCCeeEEEEeeCCcEEEEEEcCCcCCcccceEecccchhhhccCCcceecceehhhhhhcccceEEECCc
Confidence 678899999997 5999999999999999999999999999999999999998 57899999999999999999999999
Q ss_pred EEEeecCCCCCCCCCCCCCCCccceEEEEEecCCCCCEEEEEEEeCCCCCCCCceeEEEEEEEEeCCCeEEEEEEEEeCC
Q 047922 85 HYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHSTDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKARN 164 (478)
Q Consensus 85 ~y~L~~N~~~n~lHG~~~g~~~~~w~v~~~~~~~~~~~v~l~~~~~~~~~gyP~~~~~~v~y~L~~~~~l~i~~~~~n~~ 164 (478)
.|+|.+|+++|++|||..||+++.|++..+..+ ..|+|++.++++++||||++.+.|+|+|..++.|.|.++|+.++
T Consensus 97 ~y~lt~N~g~n~lHgg~~gf~~~~w~v~~~~~~---~~i~f~~~s~dg~eg~PG~l~V~vtYtLn~~n~l~i~~~A~~~~ 173 (353)
T KOG1604|consen 97 PYKLTVNNGKNTLHGGIKGFDKVIWEVVKHQPD---GVIVFSHLSPDGDEGFPGDLKVTVTYTLNVANRLLIMMEATALD 173 (353)
T ss_pred eEEecccCCCccccCCcccccceEEEEEEecCC---CEEEEEEECCCCCCCCCccEEEEEEEEEccCCeeeeeehhhccC
Confidence 999999999999999999999999999998763 23699999999999999999999999999889999999998878
Q ss_pred CceeEeccCCcccccCCCCCCCccCeEEEEeCceEEeeCCCCCCCCceeccCCCCCCCCCCeeecccccCCC--CCccee
Q 047922 165 KATPVNLAQHSYWNLGGHSSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLP--GGYDIN 242 (478)
Q Consensus 165 ~~~p~nlg~HpyFnl~~~~~~~i~d~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~--~g~D~~ 242 (478)
++||+||++|.||||.++.+++|.+|+|+|.|++++|+|..+||||++.+|++|+||||.|+.|++.+...+ .|||+|
T Consensus 174 ~~TPiNLtnHsYfNL~g~~s~~I~~heI~i~a~~~~evd~~~iPTG~I~~v~~t~fD~r~p~~lgd~~~~~~~i~g~d~n 253 (353)
T KOG1604|consen 174 KATPINLTNHSYFNLAGHNSGGIEGHEIQIEASKITEVDDTLIPTGEITPVKGTTFDFRKPTVLGDRIKQFECIVGYDIN 253 (353)
T ss_pred CCcceeeccceeEeccCCCCCCccceEEEEeecccEecCCccccccceEeccCccccccCCeeccccccccccccCCCcc
Confidence 999999999999999999888999999999999999999999999999999999999999999998875443 444555
Q ss_pred EEecCCCCcccceeEEEEEcCCCCeEEEEEecCCceEEEcCCceeeeeeEEEEEeeccCCcceeecccceeecCCCCCCC
Q 047922 243 YVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGD 322 (478)
Q Consensus 243 f~l~~~~~~~~~~~~~~l~~~~sg~~L~v~~~~p~~q~yt~~~~~~~l~v~~~a~~~~~~~p~~~~~H~yfnl~g~~~~~ 322 (478)
|+++
T Consensus 254 ~~~~---------------------------------------------------------------------------- 257 (353)
T KOG1604|consen 254 YVLD---------------------------------------------------------------------------- 257 (353)
T ss_pred eEEc----------------------------------------------------------------------------
Confidence 5544
Q ss_pred eeceEEEEeccceeccCCCCCcccceeccCCCCcccCCceeccccccCCCcccceeEEeccCCCcccceeEEEEEcCCCC
Q 047922 323 ILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSG 402 (478)
Q Consensus 323 v~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~~~~~~~~~~~~~~a~l~~~~sg 402 (478)
.....+.++.+|++.+|+||
T Consensus 258 ------------------------------------------------------------~~~~~~~l~~v~k~~hp~Sg 277 (353)
T KOG1604|consen 258 ------------------------------------------------------------GSVPPNKLRKVAKAVHPKSG 277 (353)
T ss_pred ------------------------------------------------------------cCCCCcccEEEEEEEcCccC
Confidence 32222256789999999999
Q ss_pred cEEEEEecCCeeEEEeCCccccccCCCCeeeecceEEEEccCCCCCCCCCCCCCCceecCCCEEEEEEEEEEEec
Q 047922 403 RVMELLADQPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQAFPDSVNHPNFPNTIVYPGEKYKHHMLYKFSTK 477 (478)
Q Consensus 403 ~~l~v~t~~p~~qvyT~~~~~~~~~~~~~~~~~~~~i~~E~~~~pda~n~~~~~~~~l~pg~~~~~~~~y~f~~~ 477 (478)
|.|+|+|+||++|+||+|.++...||+|..|.+|+|+|+|+|.+|||+|++.||+++|+|||.|.++++|+|++.
T Consensus 278 r~lEv~TnqPgvqfYTgn~~~~~~gk~g~~y~k~g~~cletq~~pda~n~~~fp~v~l~pGE~Y~h~~~y~Fsv~ 352 (353)
T KOG1604|consen 278 RKLEVSTNQPGVQFYTGNFLPDIKGKKGAVYPKHGGLCLETQYFPDAVNHPNFPSVILRPGETYTHETVYKFSVV 352 (353)
T ss_pred cEEEEEeCCCcEEEEeccccccccCCCceEeeccceEEeecccCccccccCCCCceEecCCCeeeeEEEEEEecc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999975
No 2
>PRK11055 galM galactose-1-epimerase; Provisional
Probab=100.00 E-value=4.6e-76 Score=595.47 Aligned_cols=334 Identities=37% Similarity=0.702 Sum_probs=298.5
Q ss_pred CCCcEEEEEEEEeC-CEEEEEeccCceEEEEEeeCCCCceeeEEecCCChhhcccCCCcccceeecCCCccCCcEEEECC
Q 047922 5 NNSEEVKFYELKKG-DFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTLDG 83 (478)
Q Consensus 5 ~~~~~~~~~~L~n~-~~~v~v~~~Ga~i~~l~~~d~~G~~~dvv~g~~~~~~y~~~~~~~G~~lgp~anRI~~g~~~~~G 83 (478)
.+|+++..|+|+|+ +++|+|+++||+|++|+++|++|+++|||+||++.++|..++.|+|++||||||||++|+|+++|
T Consensus 4 ~~g~~v~~~tl~n~~g~~v~i~~~GA~i~~l~vpd~~g~~~dvvlg~~~~~~y~~~~~~~Ga~iGr~anRI~~g~f~~~G 83 (342)
T PRK11055 4 PDGQPYRLLTLRNNAGMVVTLMDWGATWLSCRVPLSDGSVREVLLGCASPEDYPDQAAYLGASVGRYANRIANSRFTLDG 83 (342)
T ss_pred CCCCeEEEEEEECCCCeEEEEeCcCcEEEEEEeECCCCCEeeeEECCCCHHHHhhCCCccCceeCCcCCcccCCEEEECC
Confidence 46889999999985 79999999999999999999999999999999999999988889999999999999999999999
Q ss_pred EEEEeecCCCCCCCCCCCCCCCccceEEEEEecCCCCCEEEEEEEeCCCCCCCCceeEEEEEEEEeCCCeEEEEEEEEeC
Q 047922 84 THYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHSTDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKAR 163 (478)
Q Consensus 84 ~~y~L~~N~~~n~lHG~~~g~~~~~w~v~~~~~~~~~~~v~l~~~~~~~~~gyP~~~~~~v~y~L~~~~~l~i~~~~~n~ 163 (478)
++|+|++|+++|+||||..||+++.|++..... ++|+|++.++++++||||++.++|+|+|+++++|+|+|++++
T Consensus 84 ~~y~L~~N~~~n~lHGg~~G~~~~~W~v~~~~~----~~v~l~~~~~~g~~GyPg~l~~~vtY~L~~~~~l~i~~~a~~- 158 (342)
T PRK11055 84 ETYQLSPNQGGNQLHGGPEGFDKRRWQIVNQND----RQVTFSLSSPDGDQGFPGNLGATVTYRLTDDNRVSITYRATV- 158 (342)
T ss_pred EEEEcccCCCCcccCCCCcccCCcEEEEEEccC----CEEEEEEECCCcCCCCCeEEEEEEEEEEcCCCeEEEEEEEEc-
Confidence 999999999999999999999999999976543 589999999999999999999999999987679999999998
Q ss_pred CCceeEeccCCcccccCCC-CCCCccCeEEEEeCceEEeeCCCCCCCCceeccCCCCCCCCCCeeecccccCCCCCccee
Q 047922 164 NKATPVNLAQHSYWNLGGH-SSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPGGYDIN 242 (478)
Q Consensus 164 ~~~~p~nlg~HpyFnl~~~-~~~~i~d~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~ 242 (478)
+++||||+|+||||||++. ...+|.+|.|+|+|++++++|++.||||++.+|++|+||||+++.|++.+... +.
T Consensus 159 d~~tp~nlt~H~YFnL~g~~~~~~i~~h~L~i~a~~~~~~d~~~iPTG~~~~v~~t~~DFr~~~~l~~~~~~~-----~~ 233 (342)
T PRK11055 159 DKPCPVNLTNHAYFNLDGAEEGSDVRNHKLQINADEYLPVDEGGIPNGGLKSVAGTSFDFRQPKTIAQDFLAD-----DD 233 (342)
T ss_pred CCCeEEeccccceEECCCCCCCCCccceEEEEecCCEEEECcccCccCcEeccCCCcccccCCcCcCcccccc-----hh
Confidence 9999999999999999874 23578999999999999999999999999999999999999999887654100 00
Q ss_pred EEecCCCCcccceeEEEEEcCCCCeEEEEEecCCceEEEcCCceeeeeeEEEEEeeccCCcceeecccceeecCCCCCCC
Q 047922 243 YVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGD 322 (478)
Q Consensus 243 f~l~~~~~~~~~~~~~~l~~~~sg~~L~v~~~~p~~q~yt~~~~~~~l~v~~~a~~~~~~~p~~~~~H~yfnl~g~~~~~ 322 (478)
.
T Consensus 234 ~------------------------------------------------------------------------------- 234 (342)
T PRK11055 234 Q------------------------------------------------------------------------------- 234 (342)
T ss_pred c-------------------------------------------------------------------------------
Confidence 0
Q ss_pred eeceEEEEeccceeccCCCCCcccceeccCCCCcccCCceeccccccCCCcccceeEEeccCCCcccceeEEEEEcCCCC
Q 047922 323 ILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSG 402 (478)
Q Consensus 323 v~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~~~~~~~~~~~~~~a~l~~~~sg 402 (478)
....||||||+++.... ..+.+|+|.+|.||
T Consensus 235 -----------------------------------------------~~~~g~D~~fvl~~~~~--~~~~~a~l~~~~sg 265 (342)
T PRK11055 235 -----------------------------------------------QKVKGYDHAFLLQAKGD--GKKPAAHLWSPDEK 265 (342)
T ss_pred -----------------------------------------------ccCCCcceEEEECCCCc--ccceeEEEEcCCCC
Confidence 00126788888754211 23567899999999
Q ss_pred cEEEEEecCCeeEEEeCCccccccCCCCeeeecceEEEEccCCCCCCCCCCCCC--CceecCCCEEEEEEEEEEEe
Q 047922 403 RVMELLADQPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQAFPDSVNHPNFP--NTIVYPGEKYKHHMLYKFST 476 (478)
Q Consensus 403 ~~l~v~t~~p~~qvyT~~~~~~~~~~~~~~~~~~~~i~~E~~~~pda~n~~~~~--~~~l~pg~~~~~~~~y~f~~ 476 (478)
++|+|+|++|+|||||+|+++...++.|..|.+|+|||||||.+|||+|+++|+ +++|+|||+|+++|+|+|++
T Consensus 266 ~~l~v~t~~p~lqvYT~n~~~~~~~~~g~~~~~~~gialE~q~~Pda~n~~~f~~~~~~L~pg~~y~~~t~y~f~~ 341 (342)
T PRK11055 266 LQMKVYTTAPALQFYSGNFLAGTPSRGGGPYADYAGLALESQFLPDSPNHPEWPQPDCILKPGEEYRSLTEYQFIA 341 (342)
T ss_pred eEEEEEcCCCEEEEecCCccCCccCCCCcEeCCCceEEEEcccCCCcccccCCCCCCeEECCCCEEEEEEEEEEEe
Confidence 999999999999999999987645788899999999999999999999999997 89999999999999999985
No 3
>PTZ00485 aldolase 1-epimerase; Provisional
Probab=100.00 E-value=1.4e-75 Score=593.45 Aligned_cols=335 Identities=33% Similarity=0.526 Sum_probs=291.4
Q ss_pred EEEEEEEeCCEEEEEeccCceEEEEEeeCC-CCceeeEEecCC-ChhhcccCCCcccceeecCCCccCCcEEEECCEEEE
Q 047922 10 VKFYELKKGDFSVKFTNWGATIVSVFLPDK-DGKVDDVVLGYD-SVDDYKNDTTYFGSVVGRVANRIGGAQFTLDGTHYK 87 (478)
Q Consensus 10 ~~~~~L~n~~~~v~v~~~Ga~i~~l~~~d~-~G~~~dvv~g~~-~~~~y~~~~~~~G~~lgp~anRI~~g~~~~~G~~y~ 87 (478)
...|+|+|++++|+|++|||+|++|+++|+ +|+++||||||+ ++++|..++.|+|++||||||||++|+|+++|++|+
T Consensus 13 ~~~~~L~N~~~~v~i~n~GA~i~si~v~~~~~g~~~dvvLG~d~~~~~Y~~~~~y~Ga~iGr~AnRI~~G~f~ldG~~Yq 92 (376)
T PTZ00485 13 DKLVWLETDRLKVGLTNYAASVASIQVYHPADNKWIEVNCGYPKNPEEAYADPDYMGATVGRCAGRVAGGVFTLDGVKYY 92 (376)
T ss_pred CcEEEEEeCCEEEEEECcCcEEEEEEEEcCCCCcEEeEEECCCCCHHHHhhCCCccCcEeCCCCCeEECCEEEECCEEEE
Confidence 457899998899999999999999999763 388999999997 699999889999999999999999999999999999
Q ss_pred eecCCCCCCCCCCCCCCCccceEEEEEecCCCCCEEEEEEEeCCCCCCCCceeEEEEEEEEe--CCCeEEEEEEE---Ee
Q 047922 88 LVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHSTDGEEGFPGDLDVTVSYSLT--SEKELSVKMKA---KA 162 (478)
Q Consensus 88 L~~N~~~n~lHG~~~g~~~~~w~v~~~~~~~~~~~v~l~~~~~~~~~gyP~~~~~~v~y~L~--~~~~l~i~~~~---~n 162 (478)
|++|++.|+||||..||+++.|++..... .+..+|+|++.++++++||||++.++|+|+|+ ++++|.|+|+| +|
T Consensus 93 L~~Neg~n~LHGG~~gf~~~~W~v~~~~~-~~~~~V~f~~~~~dg~~GfPG~l~v~vtYtL~~~~~~~L~i~y~a~~~~n 171 (376)
T PTZ00485 93 TQKNRGENTCHCGDDAYHKKHWGMKLIET-ANVIGVRFNYTSPHMENGFPGELVSKVTYSIERSKPNVLKTIYDSYIPET 171 (376)
T ss_pred ccCCCCCcccCCCCCccceeeeeEEEecc-CCCcEEEEEEECCCcCCCCCEEEEEEEEEEEecCCCCEEEEEEEEEeccc
Confidence 99999999999999999999999865332 22358999999999999999999999999996 36899999666 44
Q ss_pred C-CCceeEeccCCcccccCCCC------------CCCccCeEEEEeCceEEeeCCCCCCCCceeccCCCCCCCCCCeeec
Q 047922 163 R-NKATPVNLAQHSYWNLGGHS------------SGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIG 229 (478)
Q Consensus 163 ~-~~~~p~nlg~HpyFnl~~~~------------~~~i~d~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~ 229 (478)
. +++||+|+|+|+||||+|.. .++|.+|.|+|+|++++++|+++||||++++|++|+||||.++.|+
T Consensus 172 ~~d~~Tp~nltnH~YFNL~g~~~~~~~~~~~~~~~~~i~~h~L~i~a~~~l~~de~~IPTG~i~~v~~t~fDfr~~~~ig 251 (376)
T PTZ00485 172 SPADATPVNIFNHAYWNLNGIPERNGKKNAVWVQPESVRNHWLRVPASRVAEADRMAIPTGEFLSVEGTGLDFRQGRVIG 251 (376)
T ss_pred cCCccceeeeccceeEEcCCCccccccccccccCCCcccceEEEEecCcEEEeCcccCccCceeccCCCCccCcCCcccc
Confidence 4 89999999999999998742 2369999999999999999999999999999999999999999887
Q ss_pred ccccCCCCCcceeEEecCCCCcccceeEEEEEcCCCCeEEEEEecCCceEEEcCCceeeeeeEEEEEeeccCCcceeecc
Q 047922 230 SSIDKLPGGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLAQ 309 (478)
Q Consensus 230 ~~~~~~~~g~D~~f~l~~~~~~~~~~~~~~l~~~~sg~~L~v~~~~p~~q~yt~~~~~~~l~v~~~a~~~~~~~p~~~~~ 309 (478)
+.+ |++..+.
T Consensus 252 ~~~-------~~~~~~~--------------------------------------------------------------- 261 (376)
T PTZ00485 252 DCI-------DDVALLD--------------------------------------------------------------- 261 (376)
T ss_pred hhh-------hhhhhhc---------------------------------------------------------------
Confidence 653 1111100
Q ss_pred cceeecCCCCCCCeeceEEEEeccceeccCCCCCcccceeccCCCCcccCCceeccccccCCCcccceeEEeccCCCccc
Q 047922 310 HSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKK 389 (478)
Q Consensus 310 H~yfnl~g~~~~~v~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~~~~~~~~~~ 389 (478)
....||||||+|+.... ..
T Consensus 262 ------------------------------------------------------------~~~~G~Dh~fvl~~~~~-~~ 280 (376)
T PTZ00485 262 ------------------------------------------------------------RDPCGYDHPLAIDGWEK-GK 280 (376)
T ss_pred ------------------------------------------------------------ccCCCCCcceEECCCCC-cc
Confidence 00127888888853211 13
Q ss_pred ceeEEEEEcCCCCcEEEEEecCCeeEEEeCCccccc-cCCCCeeeecceEEEEccCCCCCCCCC-CCCCCceecCCCE-E
Q 047922 390 MRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEV-RGKGGFVYKKHAGLCLETQAFPDSVNH-PNFPNTIVYPGEK-Y 466 (478)
Q Consensus 390 ~~~~a~l~~~~sg~~l~v~t~~p~~qvyT~~~~~~~-~~~~~~~~~~~~~i~~E~~~~pda~n~-~~~~~~~l~pg~~-~ 466 (478)
++.+|+|.+|.|||+|+|+|++|+|||||+|+++.. .++.|..|.+|+|||||||.+|||+|+ ++|++++|+|||+ |
T Consensus 281 ~~~~a~l~~p~sg~~l~v~T~~P~~qiYT~n~l~~~~~~~~g~~~~~~~giclE~Q~~PDa~n~~~~fp~~vl~pge~~~ 360 (376)
T PTZ00485 281 LMLHAEAKSPVTNICMKVYSTFPCMWVYTANNKPLPASGGPGQRYARWTGMGLEPQYFPDVANHYPKYPSCIVRRGERRF 360 (376)
T ss_pred ccEEEEEEcCCCCCEEEEEECCCEEEEECCCCCCccccCCCCcCcCCCCEEEEeccCCCCcccccCCCCCeEECCCCeEE
Confidence 567899999999999999999999999999999763 578888999999999999999999999 9999999999999 9
Q ss_pred EEEEEEEEEe
Q 047922 467 KHHMLYKFST 476 (478)
Q Consensus 467 ~~~~~y~f~~ 476 (478)
..+|+|+|++
T Consensus 361 ~~~t~y~f~~ 370 (376)
T PTZ00485 361 TETILNEFTV 370 (376)
T ss_pred EEEEEEEEEe
Confidence 9999999986
No 4
>TIGR02636 galM_Leloir galactose mutarotase. Members of this protein family act as galactose mutarotase (D-galactose 1-epimerase) and participate in the Leloir pathway for galactose/glucose interconversion. All members of the seed alignment for this model are found in gene clusters with other enzymes of the Leloir pathway. This enzyme family belongs to the aldose 1-epimerase family, described by pfam model pfam01263. However, the enzyme described as aldose 1-epimerase itself (EC 5.1.3.3) is called broadly specific for D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose. The restricted genome context for genes in this family suggests members should act primarily on D-galactose.
Probab=100.00 E-value=4e-73 Score=574.50 Aligned_cols=330 Identities=37% Similarity=0.727 Sum_probs=292.7
Q ss_pred CcEEEEEEEEeC-CEEEEEeccCceEEEEEeeCCCCceeeEEecCCChhhcccCCCcccceeecCCCccCCcEEEECCEE
Q 047922 7 SEEVKFYELKKG-DFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTLDGTH 85 (478)
Q Consensus 7 ~~~~~~~~L~n~-~~~v~v~~~Ga~i~~l~~~d~~G~~~dvv~g~~~~~~y~~~~~~~G~~lgp~anRI~~g~~~~~G~~ 85 (478)
|+.+..|+|+|+ +++|+|+++||+|++|+++|++ +.+|||+||++.++|..++.|+|++||||||||++|+|+++|++
T Consensus 1 ~~~v~~~~l~n~~g~~v~i~~~GA~i~~l~~pd~~-~~~~vvlg~~~~~~y~~~~~~~Ga~igp~anRI~~g~f~~~G~~ 79 (335)
T TIGR02636 1 GQPAQLITLTNNNGMTISFMDIGATWLSCQVPLAG-ELREVLLGFASMEEYYKQDAYLGATVGRYANRIANGSFEIDGET 79 (335)
T ss_pred CCeeEEEEEECCCCcEEEEeCcCcEEEEEEeeCCC-CccceEECCCCHHHHhhCCCccCCCcCCCCceecCCEEEECCEE
Confidence 568899999995 7999999999999999999965 67899999999999998888999999999999999999999999
Q ss_pred EEeecCCCCCCCCCCCCCCCccceEEEE-EecCCCCCEEEEEEEeCCCCCCCCceeEEEEEEEEeCCCeEEEEEEEEeCC
Q 047922 86 YKLVANEKSNMLHGGPKGFSDVIWKVKT-YENEGPTPKIVFSYHSTDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKARN 164 (478)
Q Consensus 86 y~L~~N~~~n~lHG~~~g~~~~~w~v~~-~~~~~~~~~v~l~~~~~~~~~gyP~~~~~~v~y~L~~~~~l~i~~~~~n~~ 164 (478)
|+|++|+++|+||||..||+++.|++.. ... .+|+|++.++++++||||+++++|+|+|+++++|+|+|+++. +
T Consensus 80 y~L~~N~~~n~lHGg~~G~~~~~W~v~~~~~~----~~v~l~~~~~~~~~gyPg~l~~~vtY~L~~~~~L~i~~~a~~-d 154 (335)
T TIGR02636 80 YQLSINQGGNCLHGGPEGFDKRRWNIEELQEE----VQVKFSLESPDGDQGFPGNLTVSVTYTLTDDNELTIEYEATT-D 154 (335)
T ss_pred EEeccCCCCcccCCCCccccccEEeEeeecCC----CEEEEEEECCCcCCCCCeEEEEEEEEEECCCCEEEEEEEEEE-C
Confidence 9999999999999999999999999976 432 589999999989999999999999999976789999999998 9
Q ss_pred CceeEeccCCcccccCCC-CCCCccCeEEEEeCceEEeeCCCCCCCCceeccCCCCCCCCCCeeecccccCCCCCcceeE
Q 047922 165 KATPVNLAQHSYWNLGGH-SSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPGGYDINY 243 (478)
Q Consensus 165 ~~~p~nlg~HpyFnl~~~-~~~~i~d~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f 243 (478)
++||||+|+||||||++. ...++.+|.|+|+|++++++|+++||||++.+|++++||||.++.|++.+... ..
T Consensus 155 ~~tp~nlt~H~YFnL~g~~~~~~i~~~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~Dfr~~~~l~~~~~~~------~~ 228 (335)
T TIGR02636 155 KATPFNLTNHVYFNLDGADAGSDVLSHELQLNADRYLPLDEEGIPLGQLKPVDGTSFDFRKEKAIGQDFLAN------DQ 228 (335)
T ss_pred CceEEeccccceEEcCCCCCCCChhceEEEEECCcEEEeCCCcCcCCceecCCCCccccCCCcCcCcccccc------cc
Confidence 999999999999999985 34579999999999999999999999999999999999999999887654100 00
Q ss_pred EecCCCCcccceeEEEEEcCCCCeEEEEEecCCceEEEcCCceeeeeeEEEEEeeccCCcceeecccceeecCCCCCCCe
Q 047922 244 VLDKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDI 323 (478)
Q Consensus 244 ~l~~~~~~~~~~~~~~l~~~~sg~~L~v~~~~p~~q~yt~~~~~~~l~v~~~a~~~~~~~p~~~~~H~yfnl~g~~~~~v 323 (478)
.
T Consensus 229 ~------------------------------------------------------------------------------- 229 (335)
T TIGR02636 229 Q------------------------------------------------------------------------------- 229 (335)
T ss_pred c-------------------------------------------------------------------------------
Confidence 0
Q ss_pred eceEEEEeccceeccCCCCCcccceeccCCCCcccCCceeccccccCCCcccceeEEeccCCCcccceeEEEEEcCCCCc
Q 047922 324 LSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGR 403 (478)
Q Consensus 324 ~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~~~~~~~~~~~~~~a~l~~~~sg~ 403 (478)
....||||||++..... ..+.+|+|.++.+|+
T Consensus 230 ----------------------------------------------~~~~g~D~~f~l~~~~~--~~~~~a~l~~~~sg~ 261 (335)
T TIGR02636 230 ----------------------------------------------QLAKGYDHAFLLNGERL--DGKPAAILTSPDEDL 261 (335)
T ss_pred ----------------------------------------------ccCCCcceEEEECCCCC--CCceeEEEEcCCCCc
Confidence 00127888888854211 114678999999999
Q ss_pred EEEEEecCCeeEEEeCCccccccCCCCeeeecceEEEEccCCCCCCCCCCCCCCc--eecCCCEEEEEEEEEEE
Q 047922 404 VMELLADQPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQAFPDSVNHPNFPNT--IVYPGEKYKHHMLYKFS 475 (478)
Q Consensus 404 ~l~v~t~~p~~qvyT~~~~~~~~~~~~~~~~~~~~i~~E~~~~pda~n~~~~~~~--~l~pg~~~~~~~~y~f~ 475 (478)
+|+|+|++|++||||+++++...+++|+.|.+|+|||||||++||++|+++|+++ +|+|||+|.++|+|+|+
T Consensus 262 ~l~v~t~~p~~~vyT~~~~~~~~~~~g~~~~~~~gialE~q~~pd~~n~~~~~~~~~~L~pge~~~~~t~y~f~ 335 (335)
T TIGR02636 262 SLEVFTTQPALQIYTGNFLAGTPNRGGKKYVDHAGLALETQFLPDSPNHPEWGDISCILSPGQEYQHQTRYQFI 335 (335)
T ss_pred EEEEecCCCEEEEecCCCcCCccCCCCcEeCCCcEEEEecccCCCcccccCCCCCceEECCCCEEEEEEEEEEC
Confidence 9999999999999999998765677889999999999999999999999999965 59999999999999995
No 5
>PLN00194 aldose 1-epimerase; Provisional
Probab=100.00 E-value=7.3e-71 Score=558.11 Aligned_cols=334 Identities=62% Similarity=1.081 Sum_probs=296.8
Q ss_pred CCCcEEEEEEEEeCCEEEEEeccCceEEEEEeeCCCCceeeEEecCCChhhcccCCCcccceeecCCCccCCcEEEECCE
Q 047922 5 NNSEEVKFYELKKGDFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTLDGT 84 (478)
Q Consensus 5 ~~~~~~~~~~L~n~~~~v~v~~~Ga~i~~l~~~d~~G~~~dvv~g~~~~~~y~~~~~~~G~~lgp~anRI~~g~~~~~G~ 84 (478)
..|+.+..|+|+|+.++|+|+++||+|++|++++++|+++|+|+||++.++|..++.++|++||||||||++|+|.++|+
T Consensus 4 ~~~~~~~~~~L~n~~l~~~i~~~GA~l~s~~~~~~~g~~~~vvlg~~~~~~y~~~~~~~Ga~lgp~anRI~~g~~~~~G~ 83 (337)
T PLN00194 4 AAEEKPGIYELKNGNISVKLTNYGATITSLILPDKNGKLADVVLGFDSVEPYKNDSPYFGAIVGRVANRIKGAKFTLNGV 83 (337)
T ss_pred cCCCeeEEEEEEeCCEEEEEECCCcEEEEEEeECCCCCEeeeEECCCCHHHHhhCCCccCCeeCCCCCceeCCEEEECCE
Confidence 45889999999999999999999999999999988898899999999999998777899999999999999999999999
Q ss_pred EEEeecCCCCCCCCCCCCCCCccceEEEEEecCCCCCEEEEEEEeCCCCCCCCceeEEEEEEEEeCCCeEEEEEEEEeCC
Q 047922 85 HYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHSTDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKARN 164 (478)
Q Consensus 85 ~y~L~~N~~~n~lHG~~~g~~~~~w~v~~~~~~~~~~~v~l~~~~~~~~~gyP~~~~~~v~y~L~~~~~l~i~~~~~n~~ 164 (478)
+|+|++|+++|+||||.+||+++.|+++....+ +..+|+|++.++++.+||||+++++|+|+|+++++|.|+|+++|.+
T Consensus 84 ~y~l~~N~~~~~lHGg~~G~~~~~w~v~~~~~~-~~~~v~~~l~~~~~~~gyP~~~~~~v~Y~L~~~~~L~i~~~~~n~~ 162 (337)
T PLN00194 84 TYKLPPNNGPNSLHGGPKGFSKVVWEVAKYKKG-EKPSITFKYHSFDGEEGFPGDLSVTVTYTLLSSNTLRLDMEAKPLN 162 (337)
T ss_pred EEEeccCCCCcccCCCCcccCceEEeEEEeccC-CCcEEEEEEECCCcCCCCCEEEEEEEEEEECCCCeEEEEEEEEECC
Confidence 999999999999999999999999999876532 3368999999988899999999999999998558999999999877
Q ss_pred CceeEeccCCcccccCCCCCCCccCeEEEEeCceEEeeCCCCCCCCceeccCCCCCCCCCCeeecccccCCCCCcceeEE
Q 047922 165 KATPVNLAQHSYWNLGGHSSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPGGYDINYV 244 (478)
Q Consensus 165 ~~~p~nlg~HpyFnl~~~~~~~i~d~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~ 244 (478)
++||||+|+||||||++....+|.+|.|+++|++++++|++.||||++.++++++|||+.++.|++.+.....+
T Consensus 163 ~~~p~~~g~HpYFnL~~~~~~~i~~~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~l~~~~~~~~~g------ 236 (337)
T PLN00194 163 KATPVNLAQHTYWNLAGHNSGDILSHKIQIFGSHITPVDENLIPTGEILPVKGTPFDFTTPKKIGSRINELPKG------ 236 (337)
T ss_pred CCeEEEccccceEEcCCCCCCCcCCeEEEEecCCEEEeCCCcCcCCceeeCCCCCcccCCCcCcchhhccccCC------
Confidence 89999999999999998545589999999999999999999999999999999999999998887754322234
Q ss_pred ecCCCCcccceeEEEEEcCCCCeEEEEEecCCceEEEcCCceeeeeeEEEEEeeccCCcceeecccceeecCCCCCCCee
Q 047922 245 LDKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDIL 324 (478)
Q Consensus 245 l~~~~~~~~~~~~~~l~~~~sg~~L~v~~~~p~~q~yt~~~~~~~l~v~~~a~~~~~~~p~~~~~H~yfnl~g~~~~~v~ 324 (478)
T Consensus 237 -------------------------------------------------------------------------------- 236 (337)
T PLN00194 237 -------------------------------------------------------------------------------- 236 (337)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEEEeccceeccCCCCCcccceeccCCCCcccCCceeccccccCCCcccceeEEeccCCCcccceeEEEEEcCCCCcE
Q 047922 325 SQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGRV 404 (478)
Q Consensus 325 ~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~~~~~~~~~~~~~~a~l~~~~sg~~ 404 (478)
|||||++....+ .+.+.+|+|.++.||++
T Consensus 237 --------------------------------------------------~Dh~f~l~~~~~-~~~~~~a~l~~~~sg~~ 265 (337)
T PLN00194 237 --------------------------------------------------YDHNYVLDGEEK-EGLKKAAKVKDPKSGRV 265 (337)
T ss_pred --------------------------------------------------cceEEEECCCCc-ccceeeEEEEcCCCCCE
Confidence 455555432111 12345789999999999
Q ss_pred EEEEecCCeeEEEeCCccccccCCCCeeeecceEEEEccCCCCCCCCCCCCCCceecCCCEEEEEEEEEEEe
Q 047922 405 MELLADQPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQAFPDSVNHPNFPNTIVYPGEKYKHHMLYKFST 476 (478)
Q Consensus 405 l~v~t~~p~~qvyT~~~~~~~~~~~~~~~~~~~~i~~E~~~~pda~n~~~~~~~~l~pg~~~~~~~~y~f~~ 476 (478)
|+|+|++|+|||||+++++...+++|..+.+++|||||||.+|||+|+++|++++|+|||+|.++|+|+|++
T Consensus 266 l~v~t~~p~v~vyT~n~~~~~~~~~~~~~~~~~~i~lEpq~~pda~n~~~~~~~~L~pge~~~~~t~y~f~~ 337 (337)
T PLN00194 266 LELWTNAPGMQFYTSNYVNGVKGKGGAVYGKHAGLCLETQGFPDAVNQPNFPSVVVNPGEKYKHTMLFEFSA 337 (337)
T ss_pred EEEEeCCCEEEEECCCCCCCccCCCCCEeCCCCEEEEeccCCCCcccCCCCCCeEECCCCEEEEEEEEEEeC
Confidence 999999999999999998766677788899999999999999999999999999999999999999999974
No 6
>cd09019 galactose_mutarotase_like galactose mutarotase_like. Galactose mutarotase catalyzes the conversion of beta-D-galactose to alpha-D-galactose. Beta-D-galactose is produced by the degradation of lactose, a disaccharide composed of beta-D-glucose and beta-D-galactose. This epimerization reaction is the first step in the four-step Leloir pathway, which converts galactose into metabolically important glucose. This epimerization step is followed by the phosophorylation of alpha-D-galactose by galactokinase, an enzyme which can only act on the alpha anomer. A glutamate and a histidine residue of the galactose mutarotase have been shown to be critical for catalysis, the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen. Galactose mutarotase is a member of the aldose-1-epimerase superfamily.
Probab=100.00 E-value=3.3e-66 Score=523.34 Aligned_cols=325 Identities=54% Similarity=0.968 Sum_probs=287.6
Q ss_pred EEEEEeC-CEEEEEeccCceEEEEEeeCCCCceeeEEecCCChhhcccCCCcccceeecCCCccCCcEEEECCEEEEeec
Q 047922 12 FYELKKG-DFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTLDGTHYKLVA 90 (478)
Q Consensus 12 ~~~L~n~-~~~v~v~~~Ga~i~~l~~~d~~G~~~dvv~g~~~~~~y~~~~~~~G~~lgp~anRI~~g~~~~~G~~y~L~~ 90 (478)
.|+|+|+ +++|+|+++||+|++|++++++|+++|+|||+++.++|...++++|++||||||||++|+|.++|+.|+|++
T Consensus 1 ~~~l~n~~~~~~~i~~~GA~l~~l~~~~~~g~~~~~v~~~~~~~~~~~~~~~~g~~lgp~anRi~~g~~~~~G~~y~l~~ 80 (326)
T cd09019 1 LYTLTNGNGLRVSILNYGATIQSLKVPDKNGKLRDVVLGFDDLEDYLKNSPYFGATVGRVANRIANGRFTLDGKTYQLEA 80 (326)
T ss_pred CEEEECCCCcEEEEECcCcEEEEEEEECCCCCEeeeEECCCCHHHHhhCCCccCCcccCcCCeecCCEEEECCEEEEccC
Confidence 3789998 999999999999999999988888899999999999999888999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCccceEEEEEecCCCCCEEEEEEEeCCCCCCCCceeEEEEEEEEeCCCeEEEEEEEEeCCCceeEe
Q 047922 91 NEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHSTDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKARNKATPVN 170 (478)
Q Consensus 91 N~~~n~lHG~~~g~~~~~w~v~~~~~~~~~~~v~l~~~~~~~~~gyP~~~~~~v~y~L~~~~~l~i~~~~~n~~~~~p~n 170 (478)
|+++|+||||..||+.+.|++...++ ++|+|++.++++.+||||+++++|+|+|+++++|.|+|+++| +++|||+
T Consensus 81 Ne~~~~LHGg~~G~~~~~w~~~~~~~----~~v~l~~~~~~~~~gyP~~~~~~v~y~L~~~~~L~i~~~~~~-~~~~p~~ 155 (326)
T cd09019 81 NEGPNHLHGGPKGFDKRVWDVEEVEE----NSVTFSLVSPDGEEGFPGNLTVTVTYTLTDDNELTIEYEATT-DKPTPVN 155 (326)
T ss_pred CCCCcccCCCCccccCcEEeEEeccC----CEEEEEEECCcccCCCCeEEEEEEEEEECCCCEEEEEEEEEe-CCCeEec
Confidence 99999999999999999999987653 689999999888899999999999999985489999999999 9999999
Q ss_pred ccCCcccccCCCCCCCccCeEEEEeCceEEeeCCCCCCCCceeccCCCCCCCCCCeeecccccCCCCCcceeEEecCCCC
Q 047922 171 LAQHSYWNLGGHSSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPGGYDINYVLDKDDS 250 (478)
Q Consensus 171 lg~HpyFnl~~~~~~~i~d~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~l~~~~~ 250 (478)
+|+||||||++....++.+|.|++++++++++|++.||||++.+++++++||+.++.|+ .+.. . .
T Consensus 156 ~g~HpyFnl~~~~~~~~~~~~L~~~a~~~~~~d~~~iPtG~~~~~~~~~~df~~~~~l~-~~~~-----------~-~-- 220 (326)
T cd09019 156 LTNHSYFNLAGEGSGDILDHELQINADRYLPVDEELIPTGEILPVAGTPFDFRKPKPIG-RIDL-----------D-D-- 220 (326)
T ss_pred ccceeeEecCCCCCCCccceEEEEecCcEEeeCCCCCcCCCceecCCCCccccCccCcc-cccc-----------c-h--
Confidence 99999999998655579999999999999999999999999999999999999998775 2100 0 0
Q ss_pred cccceeEEEEEcCCCCeEEEEEecCCceEEEcCCceeeeeeEEEEEeeccCCcceeecccceeecCCCCCCCeeceEEEE
Q 047922 251 SKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILSQEVQI 330 (478)
Q Consensus 251 ~~~~~~~~~l~~~~sg~~L~v~~~~p~~q~yt~~~~~~~l~v~~~a~~~~~~~p~~~~~H~yfnl~g~~~~~v~~~~l~~ 330 (478)
T Consensus 221 -------------------------------------------------------------------------------- 220 (326)
T cd09019 221 -------------------------------------------------------------------------------- 220 (326)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eccceeccCCCCCcccceeccCCCCcccCCceeccccccCCCcccceeEEeccCCCcccceeEEEEEcCCCCcEEEEEec
Q 047922 331 FASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLAD 410 (478)
Q Consensus 331 ~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~~~~~~~~~~~~~~a~l~~~~sg~~l~v~t~ 410 (478)
..+ ....+|||||++..... ....+|+|.++.+|++|+|+|+
T Consensus 221 ----------~~~--------------------------~~~~~~D~~f~l~~~~~--~~~~~a~l~~~~sg~~l~v~t~ 262 (326)
T cd09019 221 ----------EQL--------------------------KLGGGYDHNFVLDKGGG--KLRPAARLTSPESGRKLEVYTT 262 (326)
T ss_pred ----------hhc--------------------------ccCCCcceEEEECCCCC--ccceeEEEEcCCCCcEEEEecC
Confidence 000 00126788887753311 1246789999999999999999
Q ss_pred CCeeEEEeCCccccccCCCCeeeecceEEEEccCCCCCCCCCCCCCCceecCCCEEEEEEEEEE
Q 047922 411 QPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQAFPDSVNHPNFPNTIVYPGEKYKHHMLYKF 474 (478)
Q Consensus 411 ~p~~qvyT~~~~~~~~~~~~~~~~~~~~i~~E~~~~pda~n~~~~~~~~l~pg~~~~~~~~y~f 474 (478)
+|++||||++.++....++|+.+.+++|||||||++|||+|+++++.++|+|||+|+.+++|+|
T Consensus 263 ~p~~~vyT~~~~~~~~~~~~~~~~~~~~iclEpq~~pdA~n~~~~g~~~L~pge~~~~~~~y~f 326 (326)
T cd09019 263 QPGVQFYTGNFLDGTPGGGGKVYGKRSGFCLETQHFPDAPNHPNFPSIILRPGETYRHTTVYRF 326 (326)
T ss_pred CCEEEEEeCCCCCcccCCCCcEeCCCCEEEEeccCCCCcccccCCCCeEECCCCEEEEEEEEEC
Confidence 9999999999887655668889999999999999999999998899999999999999999997
No 7
>PRK15172 putative aldose-1-epimerase; Provisional
Probab=100.00 E-value=2.8e-55 Score=438.21 Aligned_cols=283 Identities=21% Similarity=0.335 Sum_probs=241.5
Q ss_pred EEEEEEeCCEEEEEeccCceEEEEEeeCCCCceeeEEecCCChhhcccCCCcccceeecCCCccCCcEEEECCEEEEeec
Q 047922 11 KFYELKKGDFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTLDGTHYKLVA 90 (478)
Q Consensus 11 ~~~~L~n~~~~v~v~~~Ga~i~~l~~~d~~G~~~dvv~g~~~~~~y~~~~~~~G~~lgp~anRI~~g~~~~~G~~y~L~~ 90 (478)
..++|+|+.++|+|+++||+|++|++. | +++++|++. ++| .+.++|++||||||||++|+|.++|++|+|++
T Consensus 11 ~~~~l~~~~~~v~i~~~Ga~i~~l~~~---~--~~vv~~~~~-~~~--~~~~~g~~L~P~anRI~~g~f~~~G~~y~L~~ 82 (300)
T PRK15172 11 QTISLAAGDYQATIVTVGAGLAELTFQ---G--RHLVIPHKP-EEM--PLAHLGKVLIPWPNRIANGCYRYQGQEYQLPI 82 (300)
T ss_pred CEEEEeCCCEEEEEecCCcEEEEEEEC---C--EEEEecCCc-ccc--CccccccEecccCCeecCCEEEECCEEEECCC
Confidence 468899999999999999999999983 5 589999975 555 34678999999999999999999999999999
Q ss_pred CC--CCCCCCCCCCCCCccceEEEEEecCCCCCEEEEEEEeCCCCCCCCceeEEEEEEEEeCCCeEEEEEEEEeC-CCce
Q 047922 91 NE--KSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHSTDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKAR-NKAT 167 (478)
Q Consensus 91 N~--~~n~lHG~~~g~~~~~w~v~~~~~~~~~~~v~l~~~~~~~~~gyP~~~~~~v~y~L~~~~~l~i~~~~~n~-~~~~ 167 (478)
|+ ++|+||||.+ ++.|+|....+ ++|+|++.+++ ..||||+++++|+|+|+++++|.|+++++|. +++|
T Consensus 83 N~~~~~~~lHG~~~---~~~W~v~~~~~----~~v~l~~~~~~-~~gyP~~~~~~v~y~L~~~~~L~i~~~~~n~~~~~~ 154 (300)
T PRK15172 83 NEHVSKAAIHGLLA---WRDWQISELTA----TSVTLTAFLPP-SYGYPFMLASQVIYSLDAATGLSVEIASQNIGDVPA 154 (300)
T ss_pred CCCCCCcccCCCcc---CceEEEEEecC----CEEEEEEEcCC-CCCCCEEEEEEEEEEEccCCeEEEEEEEEECCCCce
Confidence 98 5899999965 99999977654 57999998865 5799999999999999855799999999998 9999
Q ss_pred eEeccCCcccccCCCCCCCccCeEEEEeCceEEeeCCCCCCCCceeccCCCCCCCCCCeeecccccCCCCCcceeEEecC
Q 047922 168 PVNLAQHSYWNLGGHSSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPGGYDINYVLDK 247 (478)
Q Consensus 168 p~nlg~HpyFnl~~~~~~~i~d~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~l~~ 247 (478)
||++|+||||||++ +++.+|.|+++|++++++|++.|||| +.+++++++||+.++.|++. +|||||++..
T Consensus 155 P~~~g~HpYFnl~~---~~~~~~~L~~~a~~~~~~d~~~iPtg-~~~~~~~~~df~~~~~l~~~------~~D~~f~~~~ 224 (300)
T PRK15172 155 PYGVGIHPYLTCNL---TSVDEYLLQLPANQVLAVDEHANPTT-LHHVDELDLDFSQAKKIAAT------KIDHTFKTAN 224 (300)
T ss_pred eeEEecCceEecCC---CChhceEEEEeCCeEEecCCCcCCCc-cccCCCCCcCCCCCeECCCC------CccCEEEcCC
Confidence 99999999999986 36889999999999999999999998 66888888888888776543 4566665431
Q ss_pred CCCcccceeEEEEEcCCCCeEEEEEecCCceEEEcCCceeeeeeEEEEEeeccCCcceeecccceeecCCCCCCCeeceE
Q 047922 248 DDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILSQE 327 (478)
Q Consensus 248 ~~~~~~~~~~~~l~~~~sg~~L~v~~~~p~~q~yt~~~~~~~l~v~~~a~~~~~~~p~~~~~H~yfnl~g~~~~~v~~~~ 327 (478)
T Consensus 225 -------------------------------------------------------------------------------- 224 (300)
T PRK15172 225 -------------------------------------------------------------------------------- 224 (300)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEeccceeccCCCCCcccceeccCCCCcccCCceeccccccCCCcccceeEEeccCCCcccceeEEEEEcCCCCcEEEE
Q 047922 328 VQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMEL 407 (478)
Q Consensus 328 l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~~~~~~~~~~~~~~a~l~~~~sg~~l~v 407 (478)
. ...|+|.++.+|++|++
T Consensus 225 --------------------------------------------------------~------~~~~~l~~~~~g~~l~~ 242 (300)
T PRK15172 225 --------------------------------------------------------D------LWEVRITHPQQALSVSL 242 (300)
T ss_pred --------------------------------------------------------C------ceEEEEEeCCCCeEEEE
Confidence 0 13478889999999999
Q ss_pred EecCCeeEEEeCCccccccCCCCeeeecceEEEEccCCCC-CCCCCCCCCCceecCCCEEEEEEEEEE
Q 047922 408 LADQPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQAFP-DSVNHPNFPNTIVYPGEKYKHHMLYKF 474 (478)
Q Consensus 408 ~t~~p~~qvyT~~~~~~~~~~~~~~~~~~~~i~~E~~~~p-da~n~~~~~~~~l~pg~~~~~~~~y~f 474 (478)
.+++|++||||++.+ .+++||||||++| ||+|.+ ++.++|+|||+++.+..++-
T Consensus 243 ~~~~~~~~vyt~~~~------------~~~~~ciEp~t~p~dA~n~~-~g~~~L~pge~~~~~~~i~~ 297 (300)
T PRK15172 243 CSDQPWLQIYSGEKL------------QRQGLAVEPMSCPPNAFNSG-IDLLLLEPGKTHRLFFNIGG 297 (300)
T ss_pred EcCCCEEEEECCCCC------------CCCEEEEeCCCCCCCCCCCC-CCCEEECCCCEEEEEEEEEE
Confidence 999999999999854 3789999999955 999975 79999999998766554443
No 8
>COG2017 GalM Galactose mutarotase and related enzymes [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-53 Score=426.05 Aligned_cols=297 Identities=36% Similarity=0.702 Sum_probs=248.8
Q ss_pred CCCcEEEEEEEEeC-CEEEEEeccCceEEEEEeeCCCCceeeEEecCCChhhcccCCCcccceeecCCCccCCcEEEECC
Q 047922 5 NNSEEVKFYELKKG-DFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTLDG 83 (478)
Q Consensus 5 ~~~~~~~~~~L~n~-~~~v~v~~~Ga~i~~l~~~d~~G~~~dvv~g~~~~~~y~~~~~~~G~~lgp~anRI~~g~~~~~G 83 (478)
..++.+..+++.|+ .+.++|+++||+|++|++ +| ++|++|+++.++|...+.++|++||||||||++|+|+++|
T Consensus 7 ~~~~~~~~i~~~~~~~~~~~~~~~GA~l~~l~~---~~--~~v~l~~~~~~~~~~~~~~~ga~l~p~anRI~~g~f~~~G 81 (308)
T COG2017 7 PDGQPVRLLTLGNGGGMVVTVPDWGATLTSLRV---NG--RNLLLGFDDAESYPATRGYGGAILGPYANRISNGRFTLDG 81 (308)
T ss_pred cCCCceEEEEEeCCCeEEEEEccCCcEEEEEEE---CC--ceEEeecCCHHHhccccccccceecCccCcccCCEEEECC
Confidence 46788999999997 889999999999999999 45 7999999999999887778899999999999999999999
Q ss_pred EEEEeecCCCCCCCCCCCCCCCccceEEEEEecCCCCCEEEEEEEeCCCCCCCCceeEEEEEEEEeCCCeEEEEEEEEeC
Q 047922 84 THYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHSTDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKAR 163 (478)
Q Consensus 84 ~~y~L~~N~~~n~lHG~~~g~~~~~w~v~~~~~~~~~~~v~l~~~~~~~~~gyP~~~~~~v~y~L~~~~~l~i~~~~~n~ 163 (478)
++|+|++|+++|++|||+++++.+.|+....+. . +|+++++++++||||+++++|+|+|++ +.|.|+|+++|.
T Consensus 82 ~~y~L~~N~~~~~lHG~~~~~~~~v~~~~~~~~----~--~~~l~~~~~~~gyP~~l~~~vtY~L~~-~~L~v~~~~~n~ 154 (308)
T COG2017 82 KTYQLPPNEGGNALHGGARDFDWQVWEAEEDDN----A--EFSLVLRDGEDGYPGNLEATVTYTLNE-DGLTVTYEVTND 154 (308)
T ss_pred EEEEeCCCCCCccccCCccCCCeeEEEEEeccC----C--EEEEEecccCCCCCceEEEEEEEEEcC-CCEEEEEEEEeC
Confidence 999999999999999999988777777665432 2 788888889999999999999999996 459999999996
Q ss_pred -CCceeEeccCCcccccCCCCCCCccCeEEEEeCceEEeeCC-CCCCCCceeccCCCCCCCCCCeeecccccCCCCCcce
Q 047922 164 -NKATPVNLAQHSYWNLGGHSSGDILSQEVQIFASSYTPVDD-QLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPGGYDI 241 (478)
Q Consensus 164 -~~~~p~nlg~HpyFnl~~~~~~~i~d~~L~i~a~~~~~~d~-~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~ 241 (478)
+++||||+|+||||||++.. . .+|.+.+.++.++++++ ..+|+|.+. +.++.+...+... .
T Consensus 155 ~~~~~p~~~g~HpYFnl~~~~--~-~~~~~~~~~~~~l~~~~~~~ip~~~~~---------~~~~~~~~~~~~~-~---- 217 (308)
T COG2017 155 GDEPTPFNLGNHPYFNLPGDG--R-LEHILAIASDYYLPVDDEEPIPTGDIK---------REPKPLEDDFAAD-D---- 217 (308)
T ss_pred CCCcceecccccceEecCCCC--C-cccEEEecCCceEEcccCCCCCccccc---------ccccccccccccc-c----
Confidence 66999999999999999753 2 68999999999999987 789998753 2222222111110 0
Q ss_pred eEEecCCCCcccceeEEEEEcCCCCeEEEEEecCCceEEEcCCceeeeeeEEEEEeeccCCcceeecccceeecCCCCCC
Q 047922 242 NYVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLAQHSYWNLGGHNSG 321 (478)
Q Consensus 242 ~f~l~~~~~~~~~~~~~~l~~~~sg~~L~v~~~~p~~q~yt~~~~~~~l~v~~~a~~~~~~~p~~~~~H~yfnl~g~~~~ 321 (478)
T Consensus 218 -------------------------------------------------------------------------------- 217 (308)
T COG2017 218 -------------------------------------------------------------------------------- 217 (308)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CeeceEEEEeccceeccCCCCCcccceeccCCCCcccCCceeccccccCCCcccceeEEeccCCCcccceeEEEEEcCCC
Q 047922 322 DILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHDKKS 401 (478)
Q Consensus 322 ~v~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~~~~~~~~~~~~~~a~l~~~~s 401 (478)
.|||+|.+..... .+..|++.++.+
T Consensus 218 ----------------------------------------------------~~d~~f~~~~~~~---~~~~a~l~~~~~ 242 (308)
T COG2017 218 ----------------------------------------------------PYDHAFLLNGARG---LKPAARLYDPDS 242 (308)
T ss_pred ----------------------------------------------------ccccceeeccccC---CcceEEEEcCCC
Confidence 1344444432210 245689999999
Q ss_pred CcEEEEEecCCeeEEEeCCccccccCCCCeeeecceEEEEccCC-CCCCCCCCCCCCceecCCCEEEEEEEEEEEe
Q 047922 402 GRVMELLADQPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQA-FPDSVNHPNFPNTIVYPGEKYKHHMLYKFST 476 (478)
Q Consensus 402 g~~l~v~t~~p~~qvyT~~~~~~~~~~~~~~~~~~~~i~~E~~~-~pda~n~~~~~~~~l~pg~~~~~~~~y~f~~ 476 (478)
+++|+|.|++|++|+||++.+. ++++||||||. +|||+|+++|+..+|+|||+|+.++.|+|+.
T Consensus 243 ~~~l~v~t~~p~~~~yt~~~~~-----------~~~~~clEp~~~~pdA~n~~~~~~~~L~pGe~~~~~~~~~~~~ 307 (308)
T COG2017 243 GLSLEVETDEPFVQLYTGNFLA-----------GRDGLCLEPQSGLPDAFNHPGFGLIVLEPGETYSAETRFRFES 307 (308)
T ss_pred CeEEEEEeCCCeEEEEeCCCCC-----------cCCeEEeeeccCCCCcCCCCCcccceeCCCCEEEEEEEEEEec
Confidence 9999999999999999999653 58999999999 9999999999999999999999999999975
No 9
>cd09022 Aldose_epim_Ec_YihR Aldose 1-epimerase, similar to Escherichia coli YihR. Proteins similar to Escherichia coli YihR are uncharacterized members of aldose-1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen.
Probab=100.00 E-value=1.5e-49 Score=394.75 Aligned_cols=275 Identities=27% Similarity=0.446 Sum_probs=232.2
Q ss_pred EEEEeccCceEEEEEeeCCCCceeeEEecCCChhhcccCCCcccceeecCCCccCCcEEEECCEEEEeecCC--CCCCCC
Q 047922 21 SVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTLDGTHYKLVANE--KSNMLH 98 (478)
Q Consensus 21 ~v~v~~~Ga~i~~l~~~d~~G~~~dvv~g~~~~~~y~~~~~~~G~~lgp~anRI~~g~~~~~G~~y~L~~N~--~~n~lH 98 (478)
+|+|+++||+|++|++ +| +|+|+|+++.+ + .+.++|++||||||||++|+|.++|++|+|++|+ ++|++|
T Consensus 2 ~v~i~~~Ga~l~~~~~---~g--~~il~~~~~~~-~--~~~~~g~~l~p~~nRi~~g~~~~~G~~y~l~~N~~~~~~~~H 73 (284)
T cd09022 2 RAVVTEVGAGLRSLTV---GG--RDLVEPYPADE-V--PPGAAGQVLAPWPNRIADGRYTFDGVEHQLPITEPERGNAIH 73 (284)
T ss_pred EEEEEecCcEEEEEEE---CC--EEEEecCCCcc-C--CccccccEEeeeCCcccCCEEEECCEEEEccCcCCCCCCCCc
Confidence 7899999999999998 36 69999998776 3 4578899999999999999999999999999998 489999
Q ss_pred CCCCCCCccceEEEEEecCCCCCEEEEEEEeCCCCCCCCceeEEEEEEEEeCCCeEEEEEEEEeC-CCceeEeccCCccc
Q 047922 99 GGPKGFSDVIWKVKTYENEGPTPKIVFSYHSTDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKAR-NKATPVNLAQHSYW 177 (478)
Q Consensus 99 G~~~g~~~~~w~v~~~~~~~~~~~v~l~~~~~~~~~gyP~~~~~~v~y~L~~~~~l~i~~~~~n~-~~~~p~nlg~HpyF 177 (478)
|+.+ .+.|+++...+ ++|+|++.++ .+++|||+++++++|+|+ ++.|+|+|+++|. +++|||++|+||||
T Consensus 74 G~~~---~~~w~v~~~~~----~~v~l~l~~~-~~~~yP~~~~~~~~y~L~-~~~L~i~~~v~N~~~~~~p~~~g~HpyF 144 (284)
T cd09022 74 GLVR---WADWQLVEHTD----SSVTLRTRIP-PQPGYPFTLELTVTYELD-DDGLTVTLTATNVGDEPAPFGVGFHPYL 144 (284)
T ss_pred CCee---cceEEEeeccC----CeEEEEEEeC-CccCCCceEEEEEEEEEc-CCcEEEEEEEEeCCCCCeEeeeEecceE
Confidence 9986 99999987543 5799999885 578999999999999998 5789999999998 89999999999999
Q ss_pred ccCCCCCCCccCeEEEEeCceEEeeCCCCCCCCceeccCCCCCCCCCCeeecccccCCCCCcceeEEecCCCCcccceeE
Q 047922 178 NLGGHSSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPGGYDINYVLDKDDSSKKMRKV 257 (478)
Q Consensus 178 nl~~~~~~~i~d~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~l~~~~~~~~~~~~ 257 (478)
||++. ++.+|+|++++++++++|+++||||++ ++.++.+||+.++.|++. ++||||++....
T Consensus 145 ~l~~~---~~~~~~L~~~a~~~~~~d~~~lptg~~-~~~~~~~df~~~~~l~~~------~~D~~f~~~~~~-------- 206 (284)
T cd09022 145 SAGGA---PLDECTLTLPADTWLPVDERLLPTGTE-PVAGTPYDFRTGRRLGGT------ALDTAFTDLTRD-------- 206 (284)
T ss_pred ecCCC---CcccEEEEEECceEEecCCccCCCcCc-CCCCCCccCcCCccccCc------cccccccccccC--------
Confidence 99863 478999999999999999999999984 777888899888776553 577777653100
Q ss_pred EEEEcCCCCeEEEEEecCCceEEEcCCceeeeeeEEEEEeeccCCcceeecccceeecCCCCCCCeeceEEEEeccceec
Q 047922 258 AIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTP 337 (478)
Q Consensus 258 ~~l~~~~sg~~L~v~~~~p~~q~yt~~~~~~~l~v~~~a~~~~~~~p~~~~~H~yfnl~g~~~~~v~~~~l~~~a~~~~~ 337 (478)
T Consensus 207 -------------------------------------------------------------------------------- 206 (284)
T cd09022 207 -------------------------------------------------------------------------------- 206 (284)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCcccceeccCCCCcccCCceeccccccCCCcccceeEEeccCCCcccceeEEEEEcCCCCcEEEEEecC--CeeE
Q 047922 338 VDDQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQ--PGVQ 415 (478)
Q Consensus 338 ~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~~~~~~~~~~~~~~a~l~~~~sg~~l~v~t~~--p~~q 415 (478)
. .....|+|.++.+ +.|+|.+++ |++|
T Consensus 207 ------------------------------------------------~--~~~~~~~l~~~~~-~~l~l~~~~~~~~~~ 235 (284)
T cd09022 207 ------------------------------------------------A--DGRARARLTGPDG-RGVELWADESFPWVQ 235 (284)
T ss_pred ------------------------------------------------C--CCcEEEEEECCCC-CEEEEEECCCCCEEE
Confidence 0 1134578888887 999999975 6999
Q ss_pred EEeCCccccccCCCCeeeecceEEEEccCC-CCCCCCCCCCCCceecCCCEEEEEE
Q 047922 416 YYTGGQIKEVRGKGGFVYKKHAGLCLETQA-FPDSVNHPNFPNTIVYPGEKYKHHM 470 (478)
Q Consensus 416 vyT~~~~~~~~~~~~~~~~~~~~i~~E~~~-~pda~n~~~~~~~~l~pg~~~~~~~ 470 (478)
|||++.++. +.++.+||||||+ +|||+|+. ++.++|+|||+|+.+.
T Consensus 236 vyt~~~~~~--------~~~~~~iclEP~~~~~da~n~~-~~~~~L~pge~~~~~~ 282 (284)
T cd09022 236 VFTADTLPP--------PGRRRGLAVEPMTCPPNAFNSG-TDLIVLAPGETHTASW 282 (284)
T ss_pred EECCCCCCC--------CCCCCEEEEccCCCCCCcCcCC-CCcEEECCCCEEEEEE
Confidence 999986642 2468899999999 68999985 5899999999877653
No 10
>PF01263 Aldose_epim: Aldose 1-epimerase; InterPro: IPR008183 Aldose 1-epimerase (5.1.3.3 from EC) (mutarotase) is the enzyme responsible for the anomeric interconversion of D-glucose and other aldoses between their alpha- and beta-forms. The sequence of mutarotase from two bacteria, Acinetobacter calcoaceticus and Streptococcus thermophilus is available []. It has also been shown that, on the basis of extensive sequence similarities, a mutarotase domain seems to be present in the C-terminal half of the fungal GAL10 protein which encodes, in the N-terminal part, UDP-glucose 4-epimerase.; GO: 0016853 isomerase activity, 0005975 carbohydrate metabolic process; PDB: 1YGA_A 3DCD_A 2CIQ_A 2CIS_A 2CIR_A 2HTB_C 2HTA_B 3Q1N_A 1NSZ_B 1NSR_B ....
Probab=100.00 E-value=3.3e-46 Score=373.06 Aligned_cols=295 Identities=32% Similarity=0.550 Sum_probs=254.7
Q ss_pred EEEEEEeC-CEEEEEeccCceEEEEEeeCCCCceeeEEecCCChhhcccCCCcccceeecCCCccCCcEEEECCEEEEee
Q 047922 11 KFYELKKG-DFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTLDGTHYKLV 89 (478)
Q Consensus 11 ~~~~L~n~-~~~v~v~~~Ga~i~~l~~~d~~G~~~dvv~g~~~~~~y~~~~~~~G~~lgp~anRI~~g~~~~~G~~y~L~ 89 (478)
.+|+|+|+ .++++|+++||+|.||++++ ++ +++|+++++.+.|...+ ++|++|+|+||||++|+|+++|+.|+|+
T Consensus 1 ~~itL~n~~~~~~~i~~~Ga~l~s~~~~~-~~--~~~l~~~~~~~~~~~~~-~~~~~l~p~~~Ri~~g~~~~~g~~~~l~ 76 (300)
T PF01263_consen 1 DLITLENGNGLSAVIPEYGAELTSLQVKG-NG--REVLWQPDPADAYWSNS-FGGPILFPWPNRIRNGRFTFDGKPYCLP 76 (300)
T ss_dssp EEEEEEETTSEEEEEETBTTEEEEEEETT-TT--EESB-B-STHHHHHHST-CTTCEECSCSSEEGGGEEEETTEEEEBS
T ss_pred CEEEEECCCceEEEEeccCcEEEEEEECC-CC--eEEecCCCChHHhcccc-cceeeeecccceEECCEEEECCEEEEee
Confidence 47999998 99999999999999999975 34 89999999988998877 8899999999999999999999999999
Q ss_pred cCC-CCCCCCCCCCCCCccceEEEEEecCCCCCEEEEEEEe-CCCCCCCCceeEEEEEEEEeCCCe-EEEEEEEEeCC-C
Q 047922 90 ANE-KSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHS-TDGEEGFPGDLDVTVSYSLTSEKE-LSVKMKAKARN-K 165 (478)
Q Consensus 90 ~N~-~~n~lHG~~~g~~~~~w~v~~~~~~~~~~~v~l~~~~-~~~~~gyP~~~~~~v~y~L~~~~~-l~i~~~~~n~~-~ 165 (478)
.|. .++++||+++ .+.|+++.... .++++|++.+ .++.++|||+++++++|+|. ++. |.|+|+++| . +
T Consensus 77 ~~~~~~~~~HG~~~---~~~w~v~~~~~---~~~~~~~~~~~~~~~~~yP~~~~l~~~y~L~-~~~~L~i~~~v~n-~~~ 148 (300)
T PF01263_consen 77 WNGPYPNPIHGFAR---NKPWEVEEQSE---DDSVSFTLVSDPDGEEGYPFDFRLRITYTLD-ENGKLTITYEVTN-DGK 148 (300)
T ss_dssp SSBTTTBEETBSGG---GSB-EEEEEEE---TTEEEEEEEEEETTHHHSSSEEEEEEEEEEE-TTEEEEEEEEEEE-SSS
T ss_pred eccCCCcCCCCCcc---cccEEEEEecc---cceEEEEEEecCccceeeccceeeEEEEEEC-CCCeEEEEEEEEe-cCc
Confidence 999 9999999999 89999999874 2578888887 56667899999999999999 577 999999999 6 9
Q ss_pred ceeEeccCCcccccCCCCCCCccCeEEEEeCceEEeeCCCCCCCCceeccCCCCCCCCCCeeecccccCCCCCcceeEEe
Q 047922 166 ATPVNLAQHSYWNLGGHSSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPGGYDINYVL 245 (478)
Q Consensus 166 ~~p~nlg~HpyFnl~~~~~~~i~d~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~l 245 (478)
++||++|+|||||+++. ++.++.+++++.+++++++++||||++.+++++.+||+.+..+++... ++|++|++
T Consensus 149 ~~p~~~g~HpyF~l~~~---~~~~~~~~~~~~~~~~~~~~~lptg~~~~~~~~~~d~~~~~~i~~~~~----~~D~~f~~ 221 (300)
T PF01263_consen 149 PMPFNLGFHPYFNLPGE---DIDDHQLQVPADEYLELDERLLPTGELAPVKGTPFDFRQGRPIGDDIP----GLDHCFVL 221 (300)
T ss_dssp EEEEBEEEEEEEETTCT---SGTTGEEEEEEEEEEEEETTSSEEEEEEETTTCETCGSSSEEECSSCT----CEEEEEEE
T ss_pred cEEeeccccceEEcCCc---ceeeeEEEeccceeeecccccCCceeeecccCCccccccCeeeccccc----ccceEEEc
Confidence 99999999999999974 678999999999999999999999999999999999998887766421 46666665
Q ss_pred cCCCCcccceeEEEEEcCCCCeEEEEEecCCceEEEcCCceeeeeeEEEEEeeccCCcceeecccceeecCCCCCCCeec
Q 047922 246 DKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILS 325 (478)
Q Consensus 246 ~~~~~~~~~~~~~~l~~~~sg~~L~v~~~~p~~q~yt~~~~~~~l~v~~~a~~~~~~~p~~~~~H~yfnl~g~~~~~v~~ 325 (478)
.+
T Consensus 222 ~~------------------------------------------------------------------------------ 223 (300)
T PF01263_consen 222 DP------------------------------------------------------------------------------ 223 (300)
T ss_dssp SS------------------------------------------------------------------------------
T ss_pred CC------------------------------------------------------------------------------
Confidence 42
Q ss_pred eEEEEeccceeccCCCCCcccceeccCCCCcccCCceeccccccCCCcccceeEEeccCCCcccceeEEEEEcCCCCcEE
Q 047922 326 QEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVM 405 (478)
Q Consensus 326 ~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~~~~~~~~~~~~~~a~l~~~~sg~~l 405 (478)
. ...++++.++.+++.|
T Consensus 224 ----------------------------------------------------------~-----~~~~~~~~~~~~~i~l 240 (300)
T PF01263_consen 224 ----------------------------------------------------------P-----GRPVIRLRSPGSGISL 240 (300)
T ss_dssp ----------------------------------------------------------S-----SEEEEEEETTTEEEEE
T ss_pred ----------------------------------------------------------C-----ccEEEEeecccceEEE
Confidence 0 1345677778889999
Q ss_pred EEEecCCeeEEEeCCccccccCCCCeeeecceEEEEccCCCCCCCCCCCCCCceecCCCEEEEEEEEE
Q 047922 406 ELLADQPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQAFPDSVNHPNFPNTIVYPGEKYKHHMLYK 473 (478)
Q Consensus 406 ~v~t~~p~~qvyT~~~~~~~~~~~~~~~~~~~~i~~E~~~~pda~n~~~~~~~~l~pg~~~~~~~~y~ 473 (478)
++.+++|++||||++..+ .+..+.++|+|++.++++.+.+.++.++|+|||.|+.+++|+
T Consensus 241 ~~~~~~p~~~v~t~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~pGe~~~~~~~~~ 300 (300)
T PF01263_consen 241 EFSTSFPWLVVWTPGFDP--------KYICIEPIAIEPDFVPDEANNPGKGLIVLAPGESYSFSTRYT 300 (300)
T ss_dssp EEEESSSEEEEEEETTSS--------TEETTCEEECEEESECECCCECCHEGEEEETTSEEEEEEEEE
T ss_pred EecCCCCcEEEECCCCcc--------cccCCcccccCCCeeecccccCCCCCEEECCCCEEEEEEEEC
Confidence 999999999999998532 345678999999999999999888889999999999999885
No 11
>cd01081 Aldose_epim aldose 1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism; they catalyze the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate and the histidine as the active site acid to protonate the C-5 ring oxygen.
Probab=100.00 E-value=3e-40 Score=326.88 Aligned_cols=277 Identities=28% Similarity=0.444 Sum_probs=226.9
Q ss_pred EEEEeccCceEEEEEeeCCCCceeeEEecCCChhhccc-CCCcccceeecCCCccCCcEEEECCEEEEeecCCCCCCCCC
Q 047922 21 SVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKN-DTTYFGSVVGRVANRIGGAQFTLDGTHYKLVANEKSNMLHG 99 (478)
Q Consensus 21 ~v~v~~~Ga~i~~l~~~d~~G~~~dvv~g~~~~~~y~~-~~~~~G~~lgp~anRI~~g~~~~~G~~y~L~~N~~~n~lHG 99 (478)
+++|+++||.|.+|++++ + +|+|++++....|.. ...+.|++|+||||||++|+|.++|+.|.++.|.+.+++||
T Consensus 2 ~~~i~~~Ga~i~~~~~~~--~--~~~l~~~~~~~~~~~~~~~~~~~~l~P~~gri~~g~~~~~g~~~~~~~~~~~~~lHG 77 (284)
T cd01081 2 VAVIAPRGANIISLKVKG--D--VDLLWGYPDAEEYPLAPTGGGGAILFPFANRISDGRYTFDGKQYPLNEDEGGNAIHG 77 (284)
T ss_pred EEEEeCcCcEEEEEEcCC--C--ceEEecCCChhhhcccCCCCcceEecCcCCcccCCEEeECCEEecCCCCCCCccccC
Confidence 688999999999999853 3 799999988777643 34567899999999999999999999999998888999999
Q ss_pred CCCCCCccceEEEEEecCCCCCEEEEEEEeCCCCCCCCceeEEEEEEEEeCCCeEEEEEEEEeC-CCceeEeccCCcccc
Q 047922 100 GPKGFSDVIWKVKTYENEGPTPKIVFSYHSTDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKAR-NKATPVNLAQHSYWN 178 (478)
Q Consensus 100 ~~~g~~~~~w~v~~~~~~~~~~~v~l~~~~~~~~~gyP~~~~~~v~y~L~~~~~l~i~~~~~n~-~~~~p~nlg~HpyFn 178 (478)
+++ .+.|++...+. +.++|+|++.+.+...+||++++++++|+|. +++|+|+++++|+ +++|||++|+||||+
T Consensus 78 ~~~---~~~w~v~~~~~--~~~~v~l~~~~~~~~~~~P~~~~l~~ty~L~-~~~L~i~~~v~N~~~~~~p~~~g~HpyF~ 151 (284)
T cd01081 78 FVR---NLPWRVVATDE--EEASVTLSYDLNDGPGGYPFPLELTVTYTLD-ADTLTITFTVTNLGDEPMPFGLGWHPYFG 151 (284)
T ss_pred Cee---cCcEEEEEecc--CCcEEEEEEEeCCCCCCCCEEEEEEEEEEEe-CCeEEEEEEEEeCCCCCcceeeecCceEe
Confidence 977 99999988652 2368999999876555999999999999998 5899999999998 899999999999999
Q ss_pred cCCCCCCCccCeEEEEeCceEEeeCCCCCCCCceeccCCCCCCCCCCeeecccccCCCCCcceeEEecCCCCcccceeEE
Q 047922 179 LGGHSSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPGGYDINYVLDKDDSSKKMRKVA 258 (478)
Q Consensus 179 l~~~~~~~i~d~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~l~~~~~~~~~~~~~ 258 (478)
+++. .+.+++|+++++.++++|+..+|+|+..++. .+||+....+.. ..+|++|++..
T Consensus 152 ~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~------~~~D~~~~~~~----------- 209 (284)
T cd01081 152 LPGV---AIEDLRLRVPASKVLPLDDLLPPTGELEVPG--EEDFRLGRPLGG------GELDDCFLLLG----------- 209 (284)
T ss_pred cCCC---cccceEEEecCCEEEecCCccCCCCccCCcc--cccccCCcCcCC------cccccccccCc-----------
Confidence 9863 1679999999999999998899998765543 456665544432 23566655431
Q ss_pred EEEcCCCCeEEEEEecCCceEEEcCCceeeeeeEEEEEeeccCCcceeecccceeecCCCCCCCeeceEEEEeccceecc
Q 047922 259 IVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPV 338 (478)
Q Consensus 259 ~l~~~~sg~~L~v~~~~p~~q~yt~~~~~~~l~v~~~a~~~~~~~p~~~~~H~yfnl~g~~~~~v~~~~l~~~a~~~~~~ 338 (478)
T Consensus 210 -------------------------------------------------------------------------------- 209 (284)
T cd01081 210 -------------------------------------------------------------------------------- 209 (284)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCcccceeccCCCCcccCCceeccccccCCCcccceeEEeccCCCcccceeEEEEEcCCCCcEEEEEecCCeeEEEe
Q 047922 339 DDQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYT 418 (478)
Q Consensus 339 d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~~~~~~~~~~~~~~a~l~~~~sg~~l~v~t~~p~~qvyT 418 (478)
.. .....++|.++.+++.|++.++.|.+||||
T Consensus 210 ---------------------------------------------~~---~~~~~~~l~~~~~~~~l~~~~~~~~~~v~t 241 (284)
T cd01081 210 ---------------------------------------------ND---AGTAEARLEDPDSRISVEFETGWPFWQVYT 241 (284)
T ss_pred ---------------------------------------------CC---CCeeEEEEECCCCeEEEEEeCCCCEEEEEC
Confidence 00 013457888889999999999999999999
Q ss_pred CCccccccCCCCeeeecceEEEEccCC-CCCCCCCCCCCCceec-CCCEEEEE
Q 047922 419 GGQIKEVRGKGGFVYKKHAGLCLETQA-FPDSVNHPNFPNTIVY-PGEKYKHH 469 (478)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~i~~E~~~-~pda~n~~~~~~~~l~-pg~~~~~~ 469 (478)
++. +.+.+||||||+ +|||.+...++.++|+ ||+..+..
T Consensus 242 ~~~------------~~~~~~ciEP~t~~~da~~~~~~~~~~L~~pge~~~~~ 282 (284)
T cd01081 242 GDG------------GRRGSVAIEPMTSAPDAFFNNNGGLITLKPPGETRTFS 282 (284)
T ss_pred CCC------------CcCCEEEEccccCCCCCCCCCCCceEEeCCCCceEEEE
Confidence 973 247899999999 7999877777899999 99976554
No 12
>cd09021 Aldose_epim_Ec_YphB aldose 1-epimerase, similar to Escherichia coli YphB. Proteins similar to Escherichia coli YphB are uncharacterized members of the aldose-1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen.
Probab=100.00 E-value=5.8e-40 Score=324.22 Aligned_cols=260 Identities=21% Similarity=0.302 Sum_probs=207.1
Q ss_pred EeccCceEEEEEeeCCCCceeeEEecCCChhhcccCCCccc-ceeecCCCccCCcEEEECCEEEEeecCC--CCCCCCCC
Q 047922 24 FTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFG-SVVGRVANRIGGAQFTLDGTHYKLVANE--KSNMLHGG 100 (478)
Q Consensus 24 v~~~Ga~i~~l~~~d~~G~~~dvv~g~~~~~~y~~~~~~~G-~~lgp~anRI~~g~~~~~G~~y~L~~N~--~~n~lHG~ 100 (478)
|..+||.|.+|... |...++++..+. +. . .....| ++|+||||||++|+|.++|+.|+|++|+ ++|++||+
T Consensus 5 v~~~Ga~l~sl~~~---~~~~~~l~~~~~-~~-~-~~~~~~~p~LfP~~gRi~~~~~~~~g~~y~l~~n~~~~~~~~HG~ 78 (273)
T cd09021 5 APELGGSIAALTSR---GDPTPLLRPADP-DA-A-DALAMACFPLVPFSNRIRGGRFLFAGREVALPPNTADEPHPLHGD 78 (273)
T ss_pred CCCCCceEEEEEeC---CCcceeeecCCc-cc-c-CcccccCceEeccCCcccCCcEeECCEEEecCCCCCCCccCcccc
Confidence 36799999999983 323699985532 21 1 123445 9999999999999999999999999997 68899999
Q ss_pred CCCCCccceEEEEEecCCCCCEEEEEEEeCCCCCCCCceeEEEEEEEEeCCCeEEEEEEEEeC-CCceeEeccCCccccc
Q 047922 101 PKGFSDVIWKVKTYENEGPTPKIVFSYHSTDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKAR-NKATPVNLAQHSYWNL 179 (478)
Q Consensus 101 ~~g~~~~~w~v~~~~~~~~~~~v~l~~~~~~~~~gyP~~~~~~v~y~L~~~~~l~i~~~~~n~-~~~~p~nlg~HpyFnl 179 (478)
++ .+.|++....+ ++|+|++.+.+.. +||++.++++|+|. +++|+|+++++|. ++++||++|+||||++
T Consensus 79 ar---~~~w~v~~~~~----~~v~l~l~~~~~~--~P~~~~~~~~y~L~-~~~L~i~~~~~N~~~~~~~~~~g~H~YF~~ 148 (273)
T cd09021 79 GW---RRPWQVVAASA----DSAELQLDHEADD--PPWAYRAEQRFHLA-GDGLSITLSVTNRGDRPMPAGLGFHPYFPR 148 (273)
T ss_pred hh---cCceEEEeccC----CeEEEEEecCCCC--CCEeEEEEEEEEEc-CCCEEEEEEEEECCCCCceeeeecCccEec
Confidence 87 99999987643 5799999876543 29999999999998 5899999999998 8999999999999999
Q ss_pred CCCCCCCccCeEEEEeCceEEeeCCCCCCCCceeccCCCCCCCCCCeeecccccCCCCCcceeEEecCCCCcccceeEEE
Q 047922 180 GGHSSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPGGYDINYVLDKDDSSKKMRKVAI 259 (478)
Q Consensus 180 ~~~~~~~i~d~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~l~~~~~~~~~~~~~~ 259 (478)
++ ++.|++++.+++.+|++.+|+|....+. .+||+.+..+.+. ++|+||
T Consensus 149 ~~-------~~~l~v~~~~~~~~d~~~lp~~~~~~~~--~~df~~~~~l~~~------~~D~~f---------------- 197 (273)
T cd09021 149 TP-------DTRLQADADGVWLEDEDHLPTGLRPHPP--DWDFSQPRPLPDR------WIDNCF---------------- 197 (273)
T ss_pred CC-------CCEEEEecceEEecCCCcCCCcccCCCc--chhhcCCCcCCcc------cccccc----------------
Confidence 75 7899999999999998899998764432 3566655444322 344444
Q ss_pred EEcCCCCeEEEEEecCCceEEEcCCceeeeeeEEEEEeeccCCcceeecccceeecCCCCCCCeeceEEEEeccceeccC
Q 047922 260 VHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVD 339 (478)
Q Consensus 260 l~~~~sg~~L~v~~~~p~~q~yt~~~~~~~l~v~~~a~~~~~~~p~~~~~H~yfnl~g~~~~~v~~~~l~~~a~~~~~~d 339 (478)
T Consensus 198 -------------------------------------------------------------------------------- 197 (273)
T cd09021 198 -------------------------------------------------------------------------------- 197 (273)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCcccceeccCCCCcccCCceeccccccCCCcccceeEEeccCCCcccceeEEEEEcCCCCcEEEEEecC--CeeEEE
Q 047922 340 DQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQ--PGVQYY 417 (478)
Q Consensus 340 ~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~~~~~~~~~~~~~~a~l~~~~sg~~l~v~t~~--p~~qvy 417 (478)
.... ..+.+.++.++++|+|.++. |++|||
T Consensus 198 ----------------------------------------~~~~--------~~~~l~~~~~~~~i~v~~~~~~~~~vvw 229 (273)
T cd09021 198 ----------------------------------------TGWD--------GAALIWPPERGLALTIEADAPFSHLVVY 229 (273)
T ss_pred ----------------------------------------cCCC--------cceEEecCCCCcEEEEecCCCCCEEEEE
Confidence 3210 12456678889999999987 999999
Q ss_pred eCCccccccCCCCeeeecceEEEEccCC-CCCCCCCCCCC-CceecCCCEEEEEEEE
Q 047922 418 TGGQIKEVRGKGGFVYKKHAGLCLETQA-FPDSVNHPNFP-NTIVYPGEKYKHHMLY 472 (478)
Q Consensus 418 T~~~~~~~~~~~~~~~~~~~~i~~E~~~-~pda~n~~~~~-~~~l~pg~~~~~~~~y 472 (478)
|++ .+.+||||||+ +|||+|.++++ .++|+|||+|+..+++
T Consensus 230 tp~--------------~~~~vCvEP~~~~~da~~~~~~~~~~~L~pge~~~~~~~i 272 (273)
T cd09021 230 RPP--------------GEDFFCLEPVSHAPDAHHGPGDPGLRVLAPGESLSLSMRI 272 (273)
T ss_pred cCC--------------CCCeEEEccccCCCCccCCcCCCCcEEeCCCCcEEEEEEE
Confidence 997 36899999998 99999887766 4789999998887654
No 13
>cd09024 Aldose_epim_lacX Aldose 1-epimerase, similar to Lactococcus lactis lacX. Proteins similar to Lactococcus lactis lacX are uncharacterized members of aldose-1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen.
Probab=100.00 E-value=4.7e-37 Score=305.69 Aligned_cols=176 Identities=18% Similarity=0.307 Sum_probs=149.9
Q ss_pred EEEEeCCEEEEEeccCceEEEEEeeCCCCceeeEEecCCChhhcccCCCcccceeecCCCccCCcEEEECCEEEEeecCC
Q 047922 13 YELKKGDFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTLDGTHYKLVANE 92 (478)
Q Consensus 13 ~~L~n~~~~v~v~~~Ga~i~~l~~~d~~G~~~dvv~g~~~~~~y~~~~~~~G~~lgp~anRI~~g~~~~~G~~y~L~~N~ 92 (478)
|+|+|+.++++|.++||.|+||++++ +| +++|+..+ .+.|. ..+++|+||+|||++|+|.++|+.|+|+
T Consensus 1 ~~l~n~~~~a~v~~~Ga~l~s~~~~~-~g--~e~l~~~~-~~~~~----~~~p~l~P~~gri~~g~~~~~g~~~~l~--- 69 (288)
T cd09024 1 ITLENEFLTVTISEHGAELTSIKDKK-TG--REYLWQGD-PAYWG----RHAPILFPIVGRLKDDTYTIDGKTYPMP--- 69 (288)
T ss_pred CEEECCcEEEEEeccCcEEEEEEeCC-CC--CEEEeCCC-hHHcC----CCCCEEEeeccCCCCCeEEECCEEeecc---
Confidence 57999999999999999999999854 36 69988653 22221 1248999999999999999999999998
Q ss_pred CCCCCCCCCCCCCccceEEEEEecCCCCCEEEEEEEeCCC-CCCCCceeEEEEEEEEeCCCeEEEEEEEEeC-CCceeEe
Q 047922 93 KSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHSTDG-EEGFPGDLDVTVSYSLTSEKELSVKMKAKAR-NKATPVN 170 (478)
Q Consensus 93 ~~n~lHG~~~g~~~~~w~v~~~~~~~~~~~v~l~~~~~~~-~~gyP~~~~~~v~y~L~~~~~l~i~~~~~n~-~~~~p~n 170 (478)
+||+++ ++.|++....+ .+|+|++.+++. .++|||+++++++|+|. +++|.|+++++|. +++|||+
T Consensus 70 ----~HGf~r---~~~w~v~~~~~----~~v~l~l~~~~~~~~~~P~~~~~~~~y~L~-~~~L~i~~~v~N~~~~~~p~~ 137 (288)
T cd09024 70 ----QHGFAR---DMEFEVVEQSD----DSVTFELTDNEETLKVYPFDFELRVTYTLE-GNTLKVTYEVKNPDDKTMPFS 137 (288)
T ss_pred ----CCCCcc---cCceEEEEccC----CEEEEEEccCcchhhcCCeEEEEEEEEEEe-CCEEEEEEEEEcCCCCceEEE
Confidence 699988 88999987653 689999988653 58999999999999998 6899999999998 8999999
Q ss_pred ccCCcccccCCCCCCCccCeEEEEeC---ceEEeeCCCC-CCCCc
Q 047922 171 LAQHSYWNLGGHSSGDILSQEVQIFA---SSYTPVDDQL-IPTGK 211 (478)
Q Consensus 171 lg~HpyFnl~~~~~~~i~d~~L~i~a---~~~~~~d~~~-iPtG~ 211 (478)
+|+||||++++...+++.+|.|++++ ..++++|++. +|++.
T Consensus 138 ~g~HpYF~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 182 (288)
T cd09024 138 IGGHPAFNCPLDEGEKFEDYYLEFEPKEELERIPLVGPLGLLGEK 182 (288)
T ss_pred EeCCceEECCCCCCCcccceEEEECCcccceEEecCCcccccccc
Confidence 99999999987544578899999999 5888888777 77664
No 14
>cd09025 Aldose_epim_Slr1438 Aldose 1-epimerase, similar to Synechocystis Slr1438. Proteins similar to Synechocystis Slr1438 are uncharacterized members of aldose-1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen.
Probab=100.00 E-value=6.6e-34 Score=280.58 Aligned_cols=168 Identities=15% Similarity=0.322 Sum_probs=138.2
Q ss_pred EEEEEEeCC--EEEEEe-ccCceEEEEEeeCCCCceeeEEecCCChhhcccC-CCccc-ceeecCCCccCCcEEEECCEE
Q 047922 11 KFYELKKGD--FSVKFT-NWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKND-TTYFG-SVVGRVANRIGGAQFTLDGTH 85 (478)
Q Consensus 11 ~~~~L~n~~--~~v~v~-~~Ga~i~~l~~~d~~G~~~dvv~g~~~~~~y~~~-~~~~G-~~lgp~anRI~~g~~~~~G~~ 85 (478)
..++|+++. ++++|. .+||.|.+|+. +| +++++ .++...+... +...| ++|+||+|||++|+|.++|+.
T Consensus 2 ~~~~l~~~~~~~~~~v~p~~Ga~l~s~~~---~g--~~~l~-~~~~~~~~~~~~~~gG~p~l~P~~gri~~g~~~~~g~~ 75 (271)
T cd09025 2 PTYELSDEEAGSRLRVVPERGGLITRWTV---QG--RELLY-LDEERFADPAKSVRGGIPILFPICGNLPDDGYPLAGQE 75 (271)
T ss_pred cEEEEEcCCCceEEEEecccCCEEEEEec---CC--EEEEe-cCChHHhccccccCCCCcEEECccCCCCCCeEEECCEE
Confidence 357888875 999996 69999999986 36 68887 5544444333 22334 799999999999999999999
Q ss_pred EEeecCCCCCCCCCCCCCCCccceEEEEEecCCCCCEEEEEEEeCC-CCCCCCceeEEEEEEEEeCCCeEEEEEEEEeC-
Q 047922 86 YKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHSTD-GEEGFPGDLDVTVSYSLTSEKELSVKMKAKAR- 163 (478)
Q Consensus 86 y~L~~N~~~n~lHG~~~g~~~~~w~v~~~~~~~~~~~v~l~~~~~~-~~~gyP~~~~~~v~y~L~~~~~l~i~~~~~n~- 163 (478)
|+|+ +||+++ ++.|++.... +..+|+|++.+++ ..++|||+++++++|+|. +++|.|+++++|.
T Consensus 76 ~~lp-------~HGf~r---~~~W~v~~~~---~~~~v~l~l~~~~~~~~~~P~~~~~~~~y~L~-~~~L~i~~~v~N~~ 141 (271)
T cd09025 76 YTLK-------QHGFAR---DLPWEVELLG---DGAGLTLTLRDNEATRAVYPFDFELELTYRLA-GNTLEIAQRVHNLG 141 (271)
T ss_pred Eecc-------Cccccc---CCCEEEEecC---CCcEEEEEEeCCHHHHhhCCceEEEEEEEEEe-CCEEEEEEEEEECC
Confidence 9998 699988 8899998754 1367999998765 568999999999999998 5899999999998
Q ss_pred CCceeEeccCCcccccCCCCCCCccCeEEEEeCceEEeeC
Q 047922 164 NKATPVNLAQHSYWNLGGHSSGDILSQEVQIFASSYTPVD 203 (478)
Q Consensus 164 ~~~~p~nlg~HpyFnl~~~~~~~i~d~~L~i~a~~~~~~d 203 (478)
++++||++|+||||++++ ++++.|++++.++++.+
T Consensus 142 ~~~~p~~~g~HpYF~~~~-----~~~~~l~~~~~~~~~~~ 176 (271)
T cd09025 142 DQPMPFSFGFHPYFAVPD-----KAKLSLDLPPTRCFDQK 176 (271)
T ss_pred CCcEEEEEecCceeeCCc-----hhccEEEcCHHHHhhhc
Confidence 899999999999999975 35788888877776554
No 15
>cd09020 D-hex-6-P-epi_like D-hexose-6-phosphate epimerase-like. D-Hexose-6-phosphate epimerase Ymr099c from Saccharomyces cerevisiae belongs to the large superfamily of aldose-1-epimerases. Its active site is very similar to the catalytic site of galactose mutarotase, the best studied member of the superfamily. It also contains the conserved glutamate and histidine residues that have been shown in galactose mutarotase to be critical for catalysis, the glutamate serving as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen. In addition Ymr099c contains 2 conserved arginine residues which are involved in phosphate binding, and exhibits hexose-6-phosphate mutarotase activity on glucose-6-P, galactose-6-P and mannose-6-P.
Probab=99.92 E-value=5.7e-23 Score=202.43 Aligned_cols=154 Identities=16% Similarity=0.233 Sum_probs=120.2
Q ss_pred EEEEeCCEEEEEeccCceEEEEEeeCCCCceeeEEecCCChhhcccCCCcc-c-ceeecCCCccCCcEEEECCEEEEeec
Q 047922 13 YELKKGDFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYF-G-SVVGRVANRIGGAQFTLDGTHYKLVA 90 (478)
Q Consensus 13 ~~L~n~~~~v~v~~~Ga~i~~l~~~d~~G~~~dvv~g~~~~~~y~~~~~~~-G-~~lgp~anRI~~g~~~~~G~~y~L~~ 90 (478)
++|+|++.+++|..+||.|.||+.. .| +++++ .++.+.|....... | ++++||+||+.+|
T Consensus 2 i~i~~~~~~a~i~~~Ga~l~s~~~~--~~--~~~L~-~s~~~~~~~~~~irgGiPvlfP~~g~~~~~------------- 63 (269)
T cd09020 2 IVLDHPGASAEIALQGAQVLSWKPK--GG--QDLLW-LSPQAPFDGGKAIRGGIPVCWPWFGPHGPN------------- 63 (269)
T ss_pred EEEeCCCceEEEECCCcEEEEEeCC--CC--ceeEE-ECCccccCCCCcccCCCeEeeeccCCCCCC-------------
Confidence 6789999999999999999999974 23 68887 45555666543333 4 7899999999987
Q ss_pred CCCCCCCCCCCCCCCccceEEEEEecCCCCCEEEEEEEeCC-CCCCCCceeEEEEEEEEeCCCeEEEEEEEEeC-CCcee
Q 047922 91 NEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHSTD-GEEGFPGDLDVTVSYSLTSEKELSVKMKAKAR-NKATP 168 (478)
Q Consensus 91 N~~~n~lHG~~~g~~~~~w~v~~~~~~~~~~~v~l~~~~~~-~~~gyP~~~~~~v~y~L~~~~~l~i~~~~~n~-~~~~p 168 (478)
.++++||+++ .+.|++.....+++..+++|++.+.+ ...+||++|+++++|+|. +++|.++++++|. ++++|
T Consensus 64 --~~~~~HGfaR---~~~W~l~~~~~~~~~~~l~l~l~~~~~~~~~~P~~f~l~~~~~L~-~~~L~~~l~v~N~g~~~~p 137 (269)
T cd09020 64 --ADLPAHGFAR---TRLWELLEVSEDEDGVTVSLELDDTDETRAIWPHAFELRLTVTLG-FDTLELELTVTNTGDKPFS 137 (269)
T ss_pred --CCCCcceeee---cCceEEeeeecCCCceEEEEEeCCChhhhhcCCCceEEEEEEEEc-CCcEEEEEEEECCCCCCeE
Confidence 2356999999 99999987754333345666665432 357999999999999998 5899999999999 89999
Q ss_pred EeccCCcccccCCCCCCCccCeEEEEe
Q 047922 169 VNLAQHSYWNLGGHSSGDILSQEVQIF 195 (478)
Q Consensus 169 ~nlg~HpyFnl~~~~~~~i~d~~L~i~ 195 (478)
|++|+||||+++. +.+..|..-
T Consensus 138 ~~~g~HpYf~v~d-----~~~~~v~gl 159 (269)
T cd09020 138 FTAALHTYFRVSD-----IEQVRVEGL 159 (269)
T ss_pred ehhccCeeEecCC-----ccccEEeCC
Confidence 9999999999864 345555443
No 16
>KOG1604 consensus Predicted mutarotase [Carbohydrate transport and metabolism]
Probab=99.84 E-value=6.5e-21 Score=184.81 Aligned_cols=116 Identities=47% Similarity=0.766 Sum_probs=98.7
Q ss_pred CCCCeEEEEEecCCceEEEcCCc---e------eeeeeEEEEEeeccCCcceeecccceeecCCCCCCCeeceEEEEecc
Q 047922 263 KKSGRVMELLADQPGVQYYTGGQ---I------KEELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFAS 333 (478)
Q Consensus 263 ~~sg~~L~v~~~~p~~q~yt~~~---~------~~~l~v~~~a~~~~~~~p~~~~~H~yfnl~g~~~~~v~~~~l~~~a~ 333 (478)
+++.+.+...+ ..+-+-|.++. + +..|.|.++|+..+++|||||+||+||||+|+.++.|.+|+|+|.|+
T Consensus 128 ~~~~i~f~~~s-~dg~eg~PG~l~V~vtYtLn~~n~l~i~~~A~~~~~~TPiNLtnHsYfNL~g~~s~~I~~heI~i~a~ 206 (353)
T KOG1604|consen 128 PDGVIVFSHLS-PDGDEGFPGDLKVTVTYTLNVANRLLIMMEATALDKATPINLTNHSYFNLAGHNSGGIEGHEIQIEAS 206 (353)
T ss_pred CCCEEEEEEEC-CCCCCCCCccEEEEEEEEEccCCeeeeeehhhccCCCcceeeccceeEeccCCCCCCccceEEEEeec
Confidence 33443444433 44444466642 1 35799999999889999999999999999999999999999999999
Q ss_pred ceeccCCCCCcccceeccCCCCcccCCceeccccccCCC--cccceeE
Q 047922 334 SYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLP--VGYDINY 379 (478)
Q Consensus 334 ~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~--~g~D~~f 379 (478)
..++||+.+||||++.+|++|+||||.|+.||+++.+.. .|||+||
T Consensus 207 ~~~evd~~~iPTG~I~~v~~t~fD~r~p~~lgd~~~~~~~i~g~d~n~ 254 (353)
T KOG1604|consen 207 KITEVDDTLIPTGEITPVKGTTFDFRKPTVLGDRIKQFECIVGYDINY 254 (353)
T ss_pred ccEecCCccccccceEeccCccccccCCeeccccccccccccCCCcce
Confidence 999999999999999999999999999999999998876 8999886
No 17
>PRK11055 galM galactose-1-epimerase; Provisional
Probab=99.78 E-value=5.6e-19 Score=179.25 Aligned_cols=79 Identities=39% Similarity=0.738 Sum_probs=74.2
Q ss_pred eeeEEEEEeeccCCcceeecccceeecCCCC-CCCeeceEEEEeccceeccCCCCCcccceeccCCCCcccCCceecccc
Q 047922 289 ELSVKMKAKARNKATPVNLAQHSYWNLGGHN-SGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSS 367 (478)
Q Consensus 289 ~l~v~~~a~~~~~~~p~~~~~H~yfnl~g~~-~~~v~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~ 367 (478)
+|+|+|+|+ ++++||+|+|||+||||+|.+ ..+|++|.|+|+|++++++|+++||||++++|++|+||||.++.|++.
T Consensus 149 ~l~i~~~a~-~d~~tp~nlt~H~YFnL~g~~~~~~i~~h~L~i~a~~~~~~d~~~iPTG~~~~v~~t~~DFr~~~~l~~~ 227 (342)
T PRK11055 149 RVSITYRAT-VDKPCPVNLTNHAYFNLDGAEEGSDVRNHKLQINADEYLPVDEGGIPNGGLKSVAGTSFDFRQPKTIAQD 227 (342)
T ss_pred eEEEEEEEE-cCCCeEEeccccceEECCCCCCCCCccceEEEEecCCEEEECcccCccCcEeccCCCcccccCCcCcCcc
Confidence 799999998 699999999999999999863 468999999999999999999999999999999999999999999987
Q ss_pred c
Q 047922 368 I 368 (478)
Q Consensus 368 ~ 368 (478)
+
T Consensus 228 ~ 228 (342)
T PRK11055 228 F 228 (342)
T ss_pred c
Confidence 4
No 18
>PLN00194 aldose 1-epimerase; Provisional
Probab=99.77 E-value=1.2e-18 Score=176.87 Aligned_cols=81 Identities=65% Similarity=1.072 Sum_probs=77.0
Q ss_pred eeeeEEEEEeeccCCcceeecccceeecCCCCCCCeeceEEEEeccceeccCCCCCcccceeccCCCCcccCCceecccc
Q 047922 288 EELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSS 367 (478)
Q Consensus 288 ~~l~v~~~a~~~~~~~p~~~~~H~yfnl~g~~~~~v~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~ 367 (478)
.+|+|+|+|+|.++++|+|+||||||||+|..+++|++|+|+++|+.++++|+++||||+++++++++|||+.++.|++.
T Consensus 150 ~~L~i~~~~~n~~~~~p~~~g~HpYFnL~~~~~~~i~~~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~l~~~ 229 (337)
T PLN00194 150 NTLRLDMEAKPLNKATPVNLAQHTYWNLAGHNSGDILSHKIQIFGSHITPVDENLIPTGEILPVKGTPFDFTTPKKIGSR 229 (337)
T ss_pred CeEEEEEEEEECCCCeEEEccccceEEcCCCCCCCcCCeEEEEecCCEEEeCCCcCcCCceeeCCCCCcccCCCcCcchh
Confidence 57999999998899999999999999999977778999999999999999999999999999999999999999999986
Q ss_pred c
Q 047922 368 I 368 (478)
Q Consensus 368 ~ 368 (478)
+
T Consensus 230 ~ 230 (337)
T PLN00194 230 I 230 (337)
T ss_pred h
Confidence 4
No 19
>PTZ00485 aldolase 1-epimerase; Provisional
Probab=99.67 E-value=4.9e-17 Score=165.84 Aligned_cols=81 Identities=36% Similarity=0.556 Sum_probs=73.5
Q ss_pred eeeeEEEEE---ee-ccCCcceeecccceeecCCCC------------CCCeeceEEEEeccceeccCCCCCcccceecc
Q 047922 288 EELSVKMKA---KA-RNKATPVNLAQHSYWNLGGHN------------SGDILSQEVQIFASSYTPVDDQLIPTGKIETV 351 (478)
Q Consensus 288 ~~l~v~~~a---~~-~~~~~p~~~~~H~yfnl~g~~------------~~~v~~~~l~~~a~~~~~~d~~~iPtG~~~~v 351 (478)
.+|+|+|+| +| ++++||+|||||+||||+|.+ +++|++|+|+|+|++++++|+++||||++++|
T Consensus 158 ~~L~i~y~a~~~~n~~d~~Tp~nltnH~YFNL~g~~~~~~~~~~~~~~~~~i~~h~L~i~a~~~l~~de~~IPTG~i~~v 237 (376)
T PTZ00485 158 NVLKTIYDSYIPETSPADATPVNIFNHAYWNLNGIPERNGKKNAVWVQPESVRNHWLRVPASRVAEADRMAIPTGEFLSV 237 (376)
T ss_pred CEEEEEEEEEeccccCCccceeeeccceeEEcCCCccccccccccccCCCcccceEEEEecCcEEEeCcccCccCceecc
Confidence 579999776 44 689999999999999999864 34699999999999999999999999999999
Q ss_pred CCCCcccCCceeccccc
Q 047922 352 EGTPYDFLQPHAIGSSI 368 (478)
Q Consensus 352 ~~t~~Df~~~~~i~~~~ 368 (478)
++|+||||+++.||+.+
T Consensus 238 ~~t~fDfr~~~~ig~~~ 254 (376)
T PTZ00485 238 EGTGLDFRQGRVIGDCI 254 (376)
T ss_pred CCCCccCcCCcccchhh
Confidence 99999999999999864
No 20
>cd09019 galactose_mutarotase_like galactose mutarotase_like. Galactose mutarotase catalyzes the conversion of beta-D-galactose to alpha-D-galactose. Beta-D-galactose is produced by the degradation of lactose, a disaccharide composed of beta-D-glucose and beta-D-galactose. This epimerization reaction is the first step in the four-step Leloir pathway, which converts galactose into metabolically important glucose. This epimerization step is followed by the phosophorylation of alpha-D-galactose by galactokinase, an enzyme which can only act on the alpha anomer. A glutamate and a histidine residue of the galactose mutarotase have been shown to be critical for catalysis, the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen. Galactose mutarotase is a member of the aldose-1-epimerase superfamily.
Probab=99.65 E-value=3.9e-16 Score=158.17 Aligned_cols=77 Identities=56% Similarity=0.978 Sum_probs=73.8
Q ss_pred eeeeEEEEEeeccCCcceeecccceeecCCCCCCCeeceEEEEeccceeccCCCCCcccceeccCCCCcccCCceecc
Q 047922 288 EELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIG 365 (478)
Q Consensus 288 ~~l~v~~~a~~~~~~~p~~~~~H~yfnl~g~~~~~v~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~ 365 (478)
..|+|+|+|+| ++++|+|+|+||||||+|.+..++++|+|++++++++++|+++||||++.+++++.+||+.++.|+
T Consensus 138 ~~L~i~~~~~~-~~~~p~~~g~HpyFnl~~~~~~~~~~~~L~~~a~~~~~~d~~~iPtG~~~~~~~~~~df~~~~~l~ 214 (326)
T cd09019 138 NELTIEYEATT-DKPTPVNLTNHSYFNLAGEGSGDILDHELQINADRYLPVDEELIPTGEILPVAGTPFDFRKPKPIG 214 (326)
T ss_pred CEEEEEEEEEe-CCCeEecccceeeEecCCCCCCCccceEEEEecCcEEeeCCCCCcCCCceecCCCCccccCccCcc
Confidence 58999999997 799999999999999999877789999999999999999999999999999999999999999998
No 21
>TIGR02636 galM_Leloir galactose mutarotase. Members of this protein family act as galactose mutarotase (D-galactose 1-epimerase) and participate in the Leloir pathway for galactose/glucose interconversion. All members of the seed alignment for this model are found in gene clusters with other enzymes of the Leloir pathway. This enzyme family belongs to the aldose 1-epimerase family, described by pfam model pfam01263. However, the enzyme described as aldose 1-epimerase itself (EC 5.1.3.3) is called broadly specific for D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose. The restricted genome context for genes in this family suggests members should act primarily on D-galactose.
Probab=99.65 E-value=2.5e-16 Score=159.90 Aligned_cols=81 Identities=42% Similarity=0.768 Sum_probs=75.9
Q ss_pred eeeeEEEEEeeccCCcceeecccceeecCCC-CCCCeeceEEEEeccceeccCCCCCcccceeccCCCCcccCCceeccc
Q 047922 288 EELSVKMKAKARNKATPVNLAQHSYWNLGGH-NSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGS 366 (478)
Q Consensus 288 ~~l~v~~~a~~~~~~~p~~~~~H~yfnl~g~-~~~~v~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~ 366 (478)
.+|+|+|+|+ ++++||+|+|||+||||+|. ...+|++|.|+|+|++++++|+++||||++++|++|+||||.++.|++
T Consensus 143 ~~L~i~~~a~-~d~~tp~nlt~H~YFnL~g~~~~~~i~~~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~Dfr~~~~l~~ 221 (335)
T TIGR02636 143 NELTIEYEAT-TDKATPFNLTNHVYFNLDGADAGSDVLSHELQLNADRYLPLDEEGIPLGQLKPVDGTSFDFRKEKAIGQ 221 (335)
T ss_pred CEEEEEEEEE-ECCceEEeccccceEEcCCCCCCCChhceEEEEECCcEEEeCCCcCcCCceecCCCCccccCCCcCcCc
Confidence 5799999999 89999999999999999987 456899999999999999999999999999999999999999999999
Q ss_pred ccc
Q 047922 367 SID 369 (478)
Q Consensus 367 ~~~ 369 (478)
.+.
T Consensus 222 ~~~ 224 (335)
T TIGR02636 222 DFL 224 (335)
T ss_pred ccc
Confidence 753
No 22
>cd09023 Aldose_epim_Ec_c4013 Aldose 1-epimerase, similar to Escherichia coli c4013. Proteins, similar to Escherichia coli c4013, are uncharacterized members of aldose-1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen.
Probab=99.62 E-value=2.6e-14 Score=142.02 Aligned_cols=103 Identities=18% Similarity=0.136 Sum_probs=81.8
Q ss_pred CCCCCCCCCCCCCccceEEEEEecC-CCCCEEEEEEEeCC-CCCCCCceeEEEEEEEEeCCCeEEEEEEEEeC-CCceeE
Q 047922 93 KSNMLHGGPKGFSDVIWKVKTYENE-GPTPKIVFSYHSTD-GEEGFPGDLDVTVSYSLTSEKELSVKMKAKAR-NKATPV 169 (478)
Q Consensus 93 ~~n~lHG~~~g~~~~~w~v~~~~~~-~~~~~v~l~~~~~~-~~~gyP~~~~~~v~y~L~~~~~l~i~~~~~n~-~~~~p~ 169 (478)
..|+|||... ...|++.....+ ++...|+++..... ..-|||+.++.+|+|+|. ++.|+|+++++|+ +.++|+
T Consensus 69 ~~~~lHG~~~---~~p~~~~~~~~~~~~~~~v~l~~~~~~~~~~g~~~~l~~~i~~~l~-~~~l~i~~~VtN~g~~~~P~ 144 (284)
T cd09023 69 EEYPLHGRIS---NTPAELVGVEEDEEGDYEIEVSGEVREAALFGENLRLERTIETDLG-SNEIRLEDRVTNEGFRPTPH 144 (284)
T ss_pred ccccCccccc---CCCcceEEEEeccCCCeEEEEEEEEEEeeeecCceEEEEEEEEecC-CceEEEEEEEEeCCCCCCcc
Confidence 4689999987 999999887642 22345777776643 457899999999999997 6899999999999 899999
Q ss_pred eccCCcccccCCCCCCCccCeEEEEeCceEEeeC
Q 047922 170 NLAQHSYWNLGGHSSGDILSQEVQIFASSYTPVD 203 (478)
Q Consensus 170 nlg~HpyFnl~~~~~~~i~d~~L~i~a~~~~~~d 203 (478)
.+++|+||..+.- ..+.+|++++.++.+.|
T Consensus 145 ~~~~H~n~~~p~l----~~~~~l~~p~~~~~p~~ 174 (284)
T cd09023 145 MLLYHVNFGYPLL----DEGARLEIPSKEVTPRD 174 (284)
T ss_pred eEEeeEEcCCccc----CCCCEEEecccccccCC
Confidence 9999999987531 12689999986665544
No 23
>PRK15172 putative aldose-1-epimerase; Provisional
Probab=99.61 E-value=1.6e-15 Score=151.86 Aligned_cols=83 Identities=22% Similarity=0.312 Sum_probs=77.9
Q ss_pred eeeeEEEEEee-ccCCcceeecccceeecCCCCCCCeeceEEEEeccceeccCCCCCcccceeccCCCCcccCCceeccc
Q 047922 288 EELSVKMKAKA-RNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGS 366 (478)
Q Consensus 288 ~~l~v~~~a~~-~~~~~p~~~~~H~yfnl~g~~~~~v~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~ 366 (478)
.+|+|+++|+| +++++|+|+||||||||++ +++++|+|+++|+.++++|+++|||| ..+++++++||+.++.|++
T Consensus 138 ~~L~i~~~~~n~~~~~~P~~~g~HpYFnl~~---~~~~~~~L~~~a~~~~~~d~~~iPtg-~~~~~~~~~df~~~~~l~~ 213 (300)
T PRK15172 138 TGLSVEIASQNIGDVPAPYGVGIHPYLTCNL---TSVDEYLLQLPANQVLAVDEHANPTT-LHHVDELDLDFSQAKKIAA 213 (300)
T ss_pred CeEEEEEEEEECCCCceeeEEecCceEecCC---CChhceEEEEeCCeEEecCCCcCCCc-cccCCCCCcCCCCCeECCC
Confidence 58999999999 8999999999999999986 36899999999999999999999998 7899999999999999998
Q ss_pred cccCCCcccceeEE
Q 047922 367 SIDKLPVGYDINYV 380 (478)
Q Consensus 367 ~~~~~~~g~D~~f~ 380 (478)
. +|||||+
T Consensus 214 ~------~~D~~f~ 221 (300)
T PRK15172 214 T------KIDHTFK 221 (300)
T ss_pred C------CccCEEE
Confidence 6 9999985
No 24
>COG0676 Uncharacterized enzymes related to aldose 1-epimerase [Carbohydrate transport and metabolism]
Probab=99.36 E-value=2.7e-11 Score=116.05 Aligned_cols=137 Identities=17% Similarity=0.317 Sum_probs=108.1
Q ss_pred EEEEEeCCEEEEEeccCceEEEEEeeCCCCceeeEEecCCChhhcccCCCccc--ceeecCCCccCCcEEEECCEEEEee
Q 047922 12 FYELKKGDFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFG--SVVGRVANRIGGAQFTLDGTHYKLV 89 (478)
Q Consensus 12 ~~~L~n~~~~v~v~~~Ga~i~~l~~~d~~G~~~dvv~g~~~~~~y~~~~~~~G--~~lgp~anRI~~g~~~~~G~~y~L~ 89 (478)
.+.+....-++.|+-+||.|.|++.+ |+ +|++| ..+.+.|.......| +++.||.|+++.+. +|
T Consensus 26 ~~~~~h~~~~a~islqGAqLLs~qP~---ge-~evLW-LS~~~p~~~g~aIRGGIPICwPWFG~~~~~~---------~P 91 (287)
T COG0676 26 LIVVDHPLGSAAISLQGAQLLSWQPK---GE-EEVLW-LSSNAPFKGGAAIRGGIPICWPWFGPLAQQG---------LP 91 (287)
T ss_pred ceEeecccceeEEecCCceEEEecCC---CC-CceEE-ecccCccCCCCcccCCCcEEEeccCccCCCC---------CC
Confidence 34444456789999999999999974 54 68887 788888887666666 88999999987643 55
Q ss_pred cCCCCCCCCCCCCCCCccceEEEEEecCCCCCEEEEEEEeCCCCCCCCceeEEEEEEEEeCCCeEEEEEEEEeCCCceeE
Q 047922 90 ANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHSTDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKARNKATPV 169 (478)
Q Consensus 90 ~N~~~n~lHG~~~g~~~~~w~v~~~~~~~~~~~v~l~~~~~~~~~gyP~~~~~~v~y~L~~~~~l~i~~~~~n~~~~~p~ 169 (478)
.||+++ .+.|++.....+.+...++|.+..++. |..+.+++++++. ..|.++++..+ ..+ |
T Consensus 92 -------aHG~AR---~~~W~l~~~~~~~~~v~v~f~L~~~~~----p~~~~lr~~~~~g--~~le~~l~~~~-~~s--~ 152 (287)
T COG0676 92 -------AHGFAR---NRPWKLLEHDEDEDGVRVTFGLDLEDE----PHDFTLRLTFRFG--ETLELELESYG-EES--F 152 (287)
T ss_pred -------ccchhh---cCceeeeehhcccCceEEEEEeCCCcc----ccceEEEEEeecc--ceEEEEEEecC-hhH--H
Confidence 799999 999999998775555456666655433 8899999999996 47999999988 333 9
Q ss_pred eccCCcccccCC
Q 047922 170 NLAQHSYWNLGG 181 (478)
Q Consensus 170 nlg~HpyFnl~~ 181 (478)
+.+.|+||++..
T Consensus 153 ~~AlHtYF~VgD 164 (287)
T COG0676 153 QAALHTYFRVGD 164 (287)
T ss_pred HHhhcceEEecc
Confidence 999999999965
No 25
>KOG1594 consensus Uncharacterized enzymes related to aldose 1-epimerase [Carbohydrate transport and metabolism]
Probab=99.29 E-value=4.1e-10 Score=106.19 Aligned_cols=145 Identities=15% Similarity=0.244 Sum_probs=113.1
Q ss_pred EEEEEEEeC-CEEEEEeccCceEEEEEeeCCCCceeeEEecCCChhhcccCCCccc--ceeecCCCccCCcEEEECCEEE
Q 047922 10 VKFYELKKG-DFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFG--SVVGRVANRIGGAQFTLDGTHY 86 (478)
Q Consensus 10 ~~~~~L~n~-~~~v~v~~~Ga~i~~l~~~d~~G~~~dvv~g~~~~~~y~~~~~~~G--~~lgp~anRI~~g~~~~~G~~y 86 (478)
...+.|.+. +-+++|.-|||.+.||+.. +| +++++ ..+.+.+....+..| ++++|--|.
T Consensus 23 ~~~ivL~~p~g~taev~L~Gg~V~SWK~~--~g--eElLf-~S~kA~f~ppKpIRGGIP~~FPQFG~------------- 84 (305)
T KOG1594|consen 23 LDKIVLTDPRGSTAEVYLYGGQVVSWKNE--NG--EELLF-VSTKAIFKPPKPIRGGIPICFPQFGN------------- 84 (305)
T ss_pred CceEEEeCCCCCeEEEEEeccEEEEeecC--CC--ceeEE-echhhhcCCCCcccCCcceEeeccCC-------------
Confidence 456788874 8899998899999999985 56 56655 566666666555555 667774432
Q ss_pred EeecCCCCCCCCCCCCCCCccceEEEEEecCC---CCCEEEEEEEeCC-CCCCCCceeEEEEEEEEeCCCeEEEEEEEEe
Q 047922 87 KLVANEKSNMLHGGPKGFSDVIWKVKTYENEG---PTPKIVFSYHSTD-GEEGFPGDLDVTVSYSLTSEKELSVKMKAKA 162 (478)
Q Consensus 87 ~L~~N~~~n~lHG~~~g~~~~~w~v~~~~~~~---~~~~v~l~~~~~~-~~~gyP~~~~~~v~y~L~~~~~l~i~~~~~n 162 (478)
-+.-..|||++ ++.|.++...... ....|.|.+.+.+ ...-||+.|+++++..|. ++.|+...+++|
T Consensus 85 -----~g~l~qHGFaR---n~~W~v~~~p~~lp~~~~a~Vdl~Lk~~~~~~kiWp~~Fe~~lrv~l~-~g~Lt~~~rV~N 155 (305)
T KOG1594|consen 85 -----FGSLPQHGFAR---NRFWEVENNPPPLPSLGKATVDLILKSSEDDLKIWPHSFELRLRVSLG-DGELTLTSRVRN 155 (305)
T ss_pred -----CCccccccccc---ceeeEeccCCCCCCcCCceeEEEEecCChhhhhhCCcceEEEEEEEEc-CCceEEEEEeec
Confidence 22334799999 9999998754422 2367889888754 678999999999999998 688999999999
Q ss_pred C-CCceeEeccCCcccccCC
Q 047922 163 R-NKATPVNLAQHSYWNLGG 181 (478)
Q Consensus 163 ~-~~~~p~nlg~HpyFnl~~ 181 (478)
+ +++.-|++..|+||.++.
T Consensus 156 td~KpFsF~~alHtYf~vsd 175 (305)
T KOG1594|consen 156 TDSKPFSFSFALHTYFRVSD 175 (305)
T ss_pred CCCCceEEEeEeeeeEeecc
Confidence 9 899999999999999875
No 26
>PF01263 Aldose_epim: Aldose 1-epimerase; InterPro: IPR008183 Aldose 1-epimerase (5.1.3.3 from EC) (mutarotase) is the enzyme responsible for the anomeric interconversion of D-glucose and other aldoses between their alpha- and beta-forms. The sequence of mutarotase from two bacteria, Acinetobacter calcoaceticus and Streptococcus thermophilus is available []. It has also been shown that, on the basis of extensive sequence similarities, a mutarotase domain seems to be present in the C-terminal half of the fungal GAL10 protein which encodes, in the N-terminal part, UDP-glucose 4-epimerase.; GO: 0016853 isomerase activity, 0005975 carbohydrate metabolic process; PDB: 1YGA_A 3DCD_A 2CIQ_A 2CIS_A 2CIR_A 2HTB_C 2HTA_B 3Q1N_A 1NSZ_B 1NSR_B ....
Probab=99.25 E-value=8.6e-12 Score=124.60 Aligned_cols=86 Identities=38% Similarity=0.718 Sum_probs=79.6
Q ss_pred eee-eeEEEEEee-ccCCcceeecccceeecCCCCCCCeeceEEEEeccceeccCCCCCcccceeccCCCCcccCCceec
Q 047922 287 KEE-LSVKMKAKA-RNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAI 364 (478)
Q Consensus 287 ~~~-l~v~~~a~~-~~~~~p~~~~~H~yfnl~g~~~~~v~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i 364 (478)
+.+ |+|+|+++| + +++|+++|+|||||+++. +++++.++++++.++++|+++||||++.+++++.+||+.++.|
T Consensus 133 ~~~~L~i~~~v~n~~-~~~p~~~g~HpyF~l~~~---~~~~~~~~~~~~~~~~~~~~~lptg~~~~~~~~~~d~~~~~~i 208 (300)
T PF01263_consen 133 ENGKLTITYEVTNDG-KPMPFNLGFHPYFNLPGE---DIDDHQLQVPADEYLELDERLLPTGELAPVKGTPFDFRQGRPI 208 (300)
T ss_dssp TTEEEEEEEEEEESS-SEEEEBEEEEEEEETTCT---SGTTGEEEEEEEEEEEEETTSSEEEEEEETTTCETCGSSSEEE
T ss_pred CCCeEEEEEEEEecC-ccEEeeccccceEEcCCc---ceeeeEEEeccceeeecccccCCceeeecccCCccccccCeee
Confidence 457 999999999 7 999999999999999877 7899999999999999999999999999999999999999999
Q ss_pred cccccCCCcccceeEE
Q 047922 365 GSSIDKLPVGYDINYV 380 (478)
Q Consensus 365 ~~~~~~~~~g~D~~f~ 380 (478)
+.... ++|++|+
T Consensus 209 ~~~~~----~~D~~f~ 220 (300)
T PF01263_consen 209 GDDIP----GLDHCFV 220 (300)
T ss_dssp CSSCT----CEEEEEE
T ss_pred ccccc----ccceEEE
Confidence 98743 7898875
No 27
>cd09022 Aldose_epim_Ec_YihR Aldose 1-epimerase, similar to Escherichia coli YihR. Proteins similar to Escherichia coli YihR are uncharacterized members of aldose-1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen.
Probab=99.24 E-value=1.8e-11 Score=121.67 Aligned_cols=111 Identities=27% Similarity=0.513 Sum_probs=89.9
Q ss_pred eeeeeEEEEEee-ccCCcceeecccceeecCCCCCCCeeceEEEEeccceeccCCCCCcccceeccCCCCcccCCceecc
Q 047922 287 KEELSVKMKAKA-RNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIG 365 (478)
Q Consensus 287 ~~~l~v~~~a~~-~~~~~p~~~~~H~yfnl~g~~~~~v~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~ 365 (478)
+..|+|+|+++| +++++|+|+|+||||||+|. ++.+|+|+++|+.++++|+++||||+ .+++++.+||+.++.|+
T Consensus 117 ~~~L~i~~~v~N~~~~~~p~~~g~HpyF~l~~~---~~~~~~L~~~a~~~~~~d~~~lptg~-~~~~~~~~df~~~~~l~ 192 (284)
T cd09022 117 DDGLTVTLTATNVGDEPAPFGVGFHPYLSAGGA---PLDECTLTLPADTWLPVDERLLPTGT-EPVAGTPYDFRTGRRLG 192 (284)
T ss_pred CCcEEEEEEEEeCCCCCeEeeeEecceEecCCC---CcccEEEEEECceEEecCCccCCCcC-cCCCCCCccCcCCcccc
Confidence 357999999999 78999999999999999874 48999999999999999999999998 58889999999999998
Q ss_pred ccccCCCcccceeEEeccCCCcccceeEEEEEcCCCCcEEEEEecC-CeeEEEeCC
Q 047922 366 SSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQ-PGVQYYTGG 420 (478)
Q Consensus 366 ~~~~~~~~g~D~~f~~~~~~~~~~~~~~a~l~~~~sg~~l~v~t~~-p~~qvyT~~ 420 (478)
+. +|||||++. .. .......+++.... -.|.|++..
T Consensus 193 ~~------~~D~~f~~~------~~-------~~~~~~~~~l~~~~~~~l~l~~~~ 229 (284)
T cd09022 193 GT------ALDTAFTDL------TR-------DADGRARARLTGPDGRGVELWADE 229 (284)
T ss_pred Cc------ccccccccc------cc-------CCCCcEEEEEECCCCCEEEEEECC
Confidence 86 999999841 10 01122355665522 478888755
No 28
>COG2017 GalM Galactose mutarotase and related enzymes [Carbohydrate transport and metabolism]
Probab=99.01 E-value=6e-10 Score=111.92 Aligned_cols=60 Identities=38% Similarity=0.692 Sum_probs=54.5
Q ss_pred eeeeeEEEEEee-ccCCcceeecccceeecCCCCCCCeeceEEEEeccceeccCC-CCCccccee
Q 047922 287 KEELSVKMKAKA-RNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDD-QLIPTGKIE 349 (478)
Q Consensus 287 ~~~l~v~~~a~~-~~~~~p~~~~~H~yfnl~g~~~~~v~~~~l~~~a~~~~~~d~-~~iPtG~~~ 349 (478)
+.+|+|+|+++| ++++||+|+||||||||++..+ .+|.+.++++.++++++ ..||+|.+.
T Consensus 142 ~~~L~v~~~~~n~~~~~~p~~~g~HpYFnl~~~~~---~~~~~~~~~~~~l~~~~~~~ip~~~~~ 203 (308)
T COG2017 142 EDGLTVTYEVTNDGDEPTPFNLGNHPYFNLPGDGR---LEHILAIASDYYLPVDDEEPIPTGDIK 203 (308)
T ss_pred CCCEEEEEEEEeCCCCcceecccccceEecCCCCC---cccEEEecCCceEEcccCCCCCccccc
Confidence 346999999999 8899999999999999998865 88999999999999998 899999864
No 29
>cd01081 Aldose_epim aldose 1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism; they catalyze the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate and the histidine as the active site acid to protonate the C-5 ring oxygen.
Probab=98.96 E-value=1.1e-09 Score=108.31 Aligned_cols=82 Identities=27% Similarity=0.468 Sum_probs=71.4
Q ss_pred eeeeEEEEEee-ccCCcceeecccceeecCCCCCCCeeceEEEEeccceeccCCCCCcccceeccCCCCcccCCceeccc
Q 047922 288 EELSVKMKAKA-RNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGS 366 (478)
Q Consensus 288 ~~l~v~~~a~~-~~~~~p~~~~~H~yfnl~g~~~~~v~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~ 366 (478)
..|+|+++++| +++++|+++++||||++++.. +++++|+++++.++++|+.++|+|+..++. .+||+....+..
T Consensus 124 ~~L~i~~~v~N~~~~~~p~~~g~HpyF~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 198 (284)
T cd01081 124 DTLTITFTVTNLGDEPMPFGLGWHPYFGLPGVA---IEDLRLRVPASKVLPLDDLLPPTGELEVPG--EEDFRLGRPLGG 198 (284)
T ss_pred CeEEEEEEEEeCCCCCcceeeecCceEecCCCc---ccceEEEecCCEEEecCCccCCCCccCCcc--cccccCCcCcCC
Confidence 67999999999 789999999999999998652 789999999999999999999999887765 778888888766
Q ss_pred cccCCCcccceeEE
Q 047922 367 SIDKLPVGYDINYV 380 (478)
Q Consensus 367 ~~~~~~~g~D~~f~ 380 (478)
. .+|++|+
T Consensus 199 ~------~~D~~~~ 206 (284)
T cd01081 199 G------ELDDCFL 206 (284)
T ss_pred c------ccccccc
Confidence 4 7888864
No 30
>cd09021 Aldose_epim_Ec_YphB aldose 1-epimerase, similar to Escherichia coli YphB. Proteins similar to Escherichia coli YphB are uncharacterized members of the aldose-1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen.
Probab=98.95 E-value=9.1e-10 Score=108.85 Aligned_cols=72 Identities=22% Similarity=0.359 Sum_probs=62.6
Q ss_pred eeeeeEEEEEee-ccCCcceeecccceeecCCCCCCCeeceEEEEeccceeccCCCCCcccceeccCCCCcccCCceecc
Q 047922 287 KEELSVKMKAKA-RNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIG 365 (478)
Q Consensus 287 ~~~l~v~~~a~~-~~~~~p~~~~~H~yfnl~g~~~~~v~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~ 365 (478)
+..|+|+++++| +++++|+++++||||++++ ++.|++++..++.+|+++||+|....++ .+||+.+..|+
T Consensus 119 ~~~L~i~~~~~N~~~~~~~~~~g~H~YF~~~~-------~~~l~v~~~~~~~~d~~~lp~~~~~~~~--~~df~~~~~l~ 189 (273)
T cd09021 119 GDGLSITLSVTNRGDRPMPAGLGFHPYFPRTP-------DTRLQADADGVWLEDEDHLPTGLRPHPP--DWDFSQPRPLP 189 (273)
T ss_pred CCCEEEEEEEEECCCCCceeeeecCccEecCC-------CCEEEEecceEEecCCCcCCCcccCCCc--chhhcCCCcCC
Confidence 357999999999 7899999999999999964 7899999999999999999999876653 38899888877
Q ss_pred cc
Q 047922 366 SS 367 (478)
Q Consensus 366 ~~ 367 (478)
+.
T Consensus 190 ~~ 191 (273)
T cd09021 190 DR 191 (273)
T ss_pred cc
Confidence 64
No 31
>cd09024 Aldose_epim_lacX Aldose 1-epimerase, similar to Lactococcus lactis lacX. Proteins similar to Lactococcus lactis lacX are uncharacterized members of aldose-1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen.
Probab=98.44 E-value=4.3e-07 Score=90.55 Aligned_cols=159 Identities=16% Similarity=0.160 Sum_probs=118.6
Q ss_pred eeeeeEEEEEee-ccCCcceeecccceeecCCCCCCCeeceEEEEec---cceeccCCCC-CcccceeccCCCCcccCCc
Q 047922 287 KEELSVKMKAKA-RNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFA---SSYTPVDDQL-IPTGKIETVEGTPYDFLQP 361 (478)
Q Consensus 287 ~~~l~v~~~a~~-~~~~~p~~~~~H~yfnl~g~~~~~v~~~~l~~~a---~~~~~~d~~~-iPtG~~~~v~~t~~Df~~~ 361 (478)
+.+|+|+++++| +++++|+++|+|||||+++....++++|.|++++ ..++.+|+++ +|++.. ++. ++...
T Consensus 117 ~~~L~i~~~v~N~~~~~~p~~~g~HpYF~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~ 191 (288)
T cd09024 117 GNTLKVTYEVKNPDDKTMPFSIGGHPAFNCPLDEGEKFEDYYLEFEPKEELERIPLVGPLGLLGEKK-PLL----LNEGT 191 (288)
T ss_pred CCEEEEEEEEEcCCCCceEEEEeCCceEECCCCCCCcccceEEEECCcccceEEecCCccccccccc-ccc----CCCCe
Confidence 578999999999 7899999999999999988766679999999998 6889999888 887743 222 12222
Q ss_pred eeccccccCCCcccceeEEeccCCCcccceeEEEEEcCCCCcEEEEEe-cCCeeEEEeCCccccccCCCCeeeecceEEE
Q 047922 362 HAIGSSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLA-DQPGVQYYTGGQIKEVRGKGGFVYKKHAGLC 440 (478)
Q Consensus 362 ~~i~~~~~~~~~g~D~~f~~~~~~~~~~~~~~a~l~~~~sg~~l~v~t-~~p~~qvyT~~~~~~~~~~~~~~~~~~~~i~ 440 (478)
..+... .-.|++|++.... ...++|.++.+++.++|.. .+|.+||||+.. ....||
T Consensus 192 ~~l~~~-----~~~~~~~~~~~~~-----~~~~~l~~~~~~~~v~l~~~~~~~l~vwt~~~-------------~~~~ic 248 (288)
T cd09024 192 LPLTHD-----LFDDDALIFDNLK-----SREVTLKSKKTGHGVTVDFDDFPYLGIWSKPN-------------GAPFVC 248 (288)
T ss_pred ecCCHH-----HhcCCEEEEcCCC-----ccEEEEEcCCCCCEEEEEeCCCCEEEEeCCCC-------------CCCEEE
Confidence 122111 1236778775432 1347888887777888764 499999999962 267999
Q ss_pred EccCC-CCCCCCCCC-----CCCceecCCCEEEEEEEEE
Q 047922 441 LETQA-FPDSVNHPN-----FPNTIVYPGEKYKHHMLYK 473 (478)
Q Consensus 441 ~E~~~-~pda~n~~~-----~~~~~l~pg~~~~~~~~y~ 473 (478)
||||+ +|||+|... -+.++|+|||.++....++
T Consensus 249 iEP~t~~~da~~~~~~~~~~~gl~~L~PGe~~~~~~~i~ 287 (288)
T cd09024 249 IEPWYGLADSVGFDGDLEDKEGINKLEPGESFEASYSIT 287 (288)
T ss_pred EcCCCCCCCcCCCCccccccCCCEEeCCCCEEEEEEEEE
Confidence 99999 999987532 2678999999887665554
No 32
>cd09269 deoxyribose_mutarotase deoxyribose mutarotase_like. Salmonella enterica serovar Typhi DeoM (earlier named as DeoX) is a mutarotase with high specificity for deoxyribose. It is encoded by one of four genes beonging to the deoK operon. This operon has also been found in Escherichia coli where it is more common in pathogenic than in commensal strains and is associated with pathogenicity. It has been found on a pathogenicity island from a human blood isolate AL863 and confers the ability to use deoxyribose as a carbon source; deoxyribose is not fermented by non-pathogenic E.coli K-12. Proteins in this family are members of the aldose-1-epimerase superfamily. Aldose 1-epimerases, or mutarotases, are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechani
Probab=98.15 E-value=4.6e-05 Score=75.95 Aligned_cols=99 Identities=13% Similarity=0.139 Sum_probs=72.2
Q ss_pred cEEEECCEEEEeecCC--CCCCCCCCCC--CCCccceEEEEEecCCCCCEEEEEEEeCCCCCCCCceeEEEEEEEEeC-C
Q 047922 77 AQFTLDGTHYKLVANE--KSNMLHGGPK--GFSDVIWKVKTYENEGPTPKIVFSYHSTDGEEGFPGDLDVTVSYSLTS-E 151 (478)
Q Consensus 77 g~~~~~G~~y~L~~N~--~~n~lHG~~~--g~~~~~w~v~~~~~~~~~~~v~l~~~~~~~~~gyP~~~~~~v~y~L~~-~ 151 (478)
|.|.+.+....+..+. ..+.|||-.. +| .+.|.+...++ +...|.++-... ...+||+++.++.+|+|.. +
T Consensus 42 g~f~f~~Gl~~~g~p~~~~~~~LHG~~~~~p~-~~~w~~~~~d~--~~~~l~l~g~~~-~~~~fg~~y~a~~~i~L~~g~ 117 (293)
T cd09269 42 GCFAFHSGLLANGCPGPEDTHPLHGEFPCAPM-DEAWLEVGEDA--SGDYLALTGEYE-YVQGFGHHYLAQPSVTLRAGS 117 (293)
T ss_pred ceEEEcCCccccCCCCCCCccCCcCCcCCCCc-cceEEEEEecC--CCCEEEEEEEEE-eeeccCccEEEEEEEEEeCCC
Confidence 5577777777777653 5789999732 22 55666654322 223454444432 3468999999999999984 3
Q ss_pred CeEEEEEEEEeC-CCceeEeccCCccccc
Q 047922 152 KELSVKMKAKAR-NKATPVNLAQHSYWNL 179 (478)
Q Consensus 152 ~~l~i~~~~~n~-~~~~p~nlg~HpyFnl 179 (478)
+.|.|+++++|+ +.++|+.+++|++|-.
T Consensus 118 ~~l~i~~~VtN~g~~p~p~~~~~H~nfg~ 146 (293)
T cd09269 118 ALFDIGMDVTNLSAQPMPLMYMCHMNYAY 146 (293)
T ss_pred CEEEEEEEEEECCCCCChhhEecccccCC
Confidence 789999999999 8999999999999976
No 33
>cd09025 Aldose_epim_Slr1438 Aldose 1-epimerase, similar to Synechocystis Slr1438. Proteins similar to Synechocystis Slr1438 are uncharacterized members of aldose-1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen.
Probab=97.84 E-value=1.3e-05 Score=79.21 Aligned_cols=137 Identities=15% Similarity=0.169 Sum_probs=107.9
Q ss_pred eeeeeEEEEEee-ccCCcceeecccceeecCCCCCCCeeceEEEEeccceeccCCCCCc-ccceeccCCCCcccCCceec
Q 047922 287 KEELSVKMKAKA-RNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIP-TGKIETVEGTPYDFLQPHAI 364 (478)
Q Consensus 287 ~~~l~v~~~a~~-~~~~~p~~~~~H~yfnl~g~~~~~v~~~~l~~~a~~~~~~d~~~iP-tG~~~~v~~t~~Df~~~~~i 364 (478)
+.+|+|+++++| +++++|+++++||||++++ ++++.|++++..++..+.+.++ .. .+..+
T Consensus 128 ~~~L~i~~~v~N~~~~~~p~~~g~HpYF~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~~-------------~~~~~ 189 (271)
T cd09025 128 GNTLEIAQRVHNLGDQPMPFSFGFHPYFAVPD-----KAKLSLDLPPTRCFDQKTDEEANTP-------------GQFDE 189 (271)
T ss_pred CCEEEEEEEEEECCCCcEEEEEecCceeeCCc-----hhccEEEcCHHHHhhhccCCccCCc-------------ccccc
Confidence 468999999999 8899999999999999974 4789999998888877755433 21 11111
Q ss_pred cccccCCCcccceeEEeccCCCcccceeEEEEEcCCCCcEEEEEec--CCeeEEEeCCccccccCCCCeeeecceEEEEc
Q 047922 365 GSSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLAD--QPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLE 442 (478)
Q Consensus 365 ~~~~~~~~~g~D~~f~~~~~~~~~~~~~~a~l~~~~sg~~l~v~t~--~p~~qvyT~~~~~~~~~~~~~~~~~~~~i~~E 442 (478)
. ...+|++|+.. + .++|.++.++++|.|.++ .+.+|||++.+ ...||||
T Consensus 190 ~------~~~~D~~y~~~------~---~~~l~~~~~~~~i~l~~~~~~~~~vvw~p~~--------------~~~vCvE 240 (271)
T cd09025 190 T------EEGVDLLFRPL------G---PASLTDGARGLKITLDHDEPFSNLVVWTDKG--------------KDFVCLE 240 (271)
T ss_pred c------ccccchhhccC------C---ceEEEecCCCEEEEEecCCCcceEEEecCCC--------------CcEEEEe
Confidence 1 23789999842 1 478888888999999986 57999999862 5799999
Q ss_pred cCC-CCCCCCCCCCCCceecCCCEEEEEEE
Q 047922 443 TQA-FPDSVNHPNFPNTIVYPGEKYKHHML 471 (478)
Q Consensus 443 ~~~-~pda~n~~~~~~~~l~pg~~~~~~~~ 471 (478)
||+ +|||+|.+. +.++|+|||+++....
T Consensus 241 p~t~~~nA~n~~~-~~~~L~PGe~~~~~~~ 269 (271)
T cd09025 241 PWTGPRNALNTGE-RLLLLPPGETEEASVR 269 (271)
T ss_pred cCCCCccccCcCC-ccEEECCCCEEEEEEE
Confidence 987 999999875 8899999998866543
No 34
>PF14486 DUF4432: Domain of unknown function (DUF4432); PDB: 3TY1_A.
Probab=97.76 E-value=0.0039 Score=62.55 Aligned_cols=232 Identities=18% Similarity=0.184 Sum_probs=113.4
Q ss_pred EEEEEEEEe-CCEEEEEe-ccCceEEEEEeeCCCCceeeEEecCC----Chhhcc---c---CCCccc--ceeecCCCcc
Q 047922 9 EVKFYELKK-GDFSVKFT-NWGATIVSVFLPDKDGKVDDVVLGYD----SVDDYK---N---DTTYFG--SVVGRVANRI 74 (478)
Q Consensus 9 ~~~~~~L~n-~~~~v~v~-~~Ga~i~~l~~~d~~G~~~dvv~g~~----~~~~y~---~---~~~~~G--~~lgp~anRI 74 (478)
-+..++|+| ++++++|+ ..|.-|-++.. +| +++-|-.. .+..|. . ...|.| .+.|.-.+.
T Consensus 3 Gv~~l~i~N~~gl~~~vlp~rg~dI~~~~~---~G--~~l~w~s~~~~~~P~~~~~~~g~~~l~~f~g~l~tcGl~~~G- 76 (302)
T PF14486_consen 3 GVRALEIRNGGGLRFTVLPDRGMDIWDAEF---DG--VNLGWHSPFGLVHPAYYDSPGGLGWLRTFGGFLFTCGLDNNG- 76 (302)
T ss_dssp T-EEEEEEETTS-EEEEETTTTTEEEEEEE---TT--EEE----S-----GGG--HHHHTGGGGT---SEEEEEES--S-
T ss_pred CcEEEEEECCCCcEEEEecccCCceEEEEE---CC--EEecccCCCcCCCCccccccCCcchhhcccchheeeccccCC-
Confidence 367889999 69999996 59999999998 36 57554211 122221 0 011112 223332221
Q ss_pred CCcEEEECCEEEEeecCCCCCCCCCCCCCCCccceEEEEEec-CCCCCEEEEEEEeCCCCCCCCceeEEEEEEEEe-CCC
Q 047922 75 GGAQFTLDGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYEN-EGPTPKIVFSYHSTDGEEGFPGDLDVTVSYSLT-SEK 152 (478)
Q Consensus 75 ~~g~~~~~G~~y~L~~N~~~n~lHG~~~g~~~~~w~v~~~~~-~~~~~~v~l~~~~~~~~~gyP~~~~~~v~y~L~-~~~ 152 (478)
.--..+|..| .|||-.. ..+|+....+. +++...|.++-.... ..+|=.++.++=++++. +.+
T Consensus 77 --~P~~~~g~~~---------~LHG~i~---~~Pa~~v~~~~~~~~~~~i~v~G~v~~-~~~fg~~l~l~r~i~~~~g~~ 141 (302)
T PF14486_consen 77 --APSEDDGETY---------PLHGRIS---NTPAEHVWLEIWDGDGYEIEVSGEVRE-AAGFGENLRLERTIRLRAGSN 141 (302)
T ss_dssp --S-EEETTEEE----------TTBSGG---GS--SEEEEEEESSTT--EEEEEEEEE-EETTTEEEEEEEEEEE-TT-S
T ss_pred --CCCCcCCccc---------ccccccc---CCCcceEEEEEecCCCcEEEEEEEEEE-EEeccCcEEEEEEEEEECCCc
Confidence 1123344444 4799766 66776443332 222345555543322 22344445555555553 357
Q ss_pred eEEEEEEEEeC-CCceeEeccCCcccccCCCCCCCccCeEEEEeCceEEeeCCCCCCCCceeccCCCCCCCCCCeeeccc
Q 047922 153 ELSVKMKAKAR-NKATPVNLAQHSYWNLGGHSSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSS 231 (478)
Q Consensus 153 ~l~i~~~~~n~-~~~~p~nlg~HpyFnl~~~~~~~i~d~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~ 231 (478)
.+.|+.+++|+ .+++|+.+-.|+=|--+--+ .+.+|..+..++++.++..-. ...+++... .
T Consensus 142 ~i~i~d~VtN~~~~p~p~m~lyH~N~G~pll~----eg~ri~~p~~~~~~~~~~a~~---------~~~~~~~~~---~- 204 (302)
T PF14486_consen 142 TIRIEDRVTNLGFQPMPLMYLYHMNFGYPLLD----EGARIVAPTKEVTPRDDRAAE---------GIADWDRMP---A- 204 (302)
T ss_dssp EEEEEEEEEE-SSS-EEEEEEEEEEE-TTT-S----TT-EEE--EEEEEESSGGGGG---------GSTTTTB-------
T ss_pred EEEEEEEEEECCCCCchhHHhhhhccCccccC----CCcEEEcCcccccCCchhhhc---------CCccceecC---C-
Confidence 89999999999 89999999999855433211 256888888888776632111 111221110 0
Q ss_pred ccCCCCCc-ceeEEecCCCCcccceeEEEEEcCCCCeEEEEE---ecCCceEEEc
Q 047922 232 IDKLPGGY-DINYVLDKDDSSKKMRKVAIVHDKKSGRVMELL---ADQPGVQYYT 282 (478)
Q Consensus 232 ~~~~~~g~-D~~f~l~~~~~~~~~~~~~~l~~~~sg~~L~v~---~~~p~~q~yt 282 (478)
-..++ +.+|..+.. .+......+.+.+++.++.+.+. ..+|++..|-
T Consensus 205 ---P~~~~~E~Vy~~~~~-~d~~G~~~~~l~n~~~g~g~~v~f~~~~lP~~~~Wk 255 (302)
T PF14486_consen 205 ---PQPGFPEQVYFHDLL-ADEDGWAHAALVNPDGGLGFEVRFDTSQLPYLTQWK 255 (302)
T ss_dssp ---S-TT---EEEEEEE----TTSEEEEEEE-SSSS-EEEEEEETTTS-EEEEEE
T ss_pred ---CCCCCCcEEEEeccc-ccCCCcEEEEEECCCCCcEEEEEEchHHCChhHhhe
Confidence 01123 566665422 23344677888999887666663 7778877774
No 35
>cd09023 Aldose_epim_Ec_c4013 Aldose 1-epimerase, similar to Escherichia coli c4013. Proteins, similar to Escherichia coli c4013, are uncharacterized members of aldose-1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen.
Probab=95.52 E-value=0.02 Score=56.94 Aligned_cols=148 Identities=19% Similarity=0.202 Sum_probs=101.0
Q ss_pred eeeeeEEEEEee-ccCCcceeecccceeecCCCCCCCeeceEEEEeccceeccCCCCCcccceeccCCCC--cccCCc-e
Q 047922 287 KEELSVKMKAKA-RNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTP--YDFLQP-H 362 (478)
Q Consensus 287 ~~~l~v~~~a~~-~~~~~p~~~~~H~yfnl~g~~~~~v~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~--~Df~~~-~ 362 (478)
+.+|+|+++++| ++.++|+++++|+||...-. ..+++|++++.+++++|++.. ++.. .++..| .
T Consensus 125 ~~~l~i~~~VtN~g~~~~P~~~~~H~n~~~p~l----~~~~~l~~p~~~~~p~~~~~~--------~~~~~~~~~~~p~~ 192 (284)
T cd09023 125 SNEIRLEDRVTNEGFRPTPHMLLYHVNFGYPLL----DEGARLEIPSKEVTPRDAHAA--------EGLASWNTYLAPTP 192 (284)
T ss_pred CceEEEEEEEEeCCCCCCcceEEeeEEcCCccc----CCCCEEEecccccccCChhhc--------ccccccccccCCCC
Confidence 457999999999 88999999999999975311 238899999988888875521 2221 345544 2
Q ss_pred eccccccCCCcccceeEEeccCCCcccceeEEEEEcCCCCcEEEEE--e-cCCeeEEEeCCccccccCCCCeeeecceEE
Q 047922 363 AIGSSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELL--A-DQPGVQYYTGGQIKEVRGKGGFVYKKHAGL 439 (478)
Q Consensus 363 ~i~~~~~~~~~g~D~~f~~~~~~~~~~~~~~a~l~~~~sg~~l~v~--t-~~p~~qvyT~~~~~~~~~~~~~~~~~~~~i 439 (478)
.+.+. -|++.+.-+ . .....+.|.++..|..++++ + ..|++|+|++..- ..-.+
T Consensus 193 ~~~e~------v~~~~~~~d--~---~g~~~~~l~~~~~g~~~~l~~~~~~~p~~~~W~~~~~------------~~y~l 249 (284)
T cd09023 193 GFAEQ------VYFHEPAAD--E---DGRAPAALVNPRLGLGVEVRFDTDTLPYLTQWKNTGA------------GAYVL 249 (284)
T ss_pred CCccE------EEEEecccc--C---CCceeEEEEcCCCCcEEEEEEehhhCCHHHHHhccCC------------CccEE
Confidence 33333 466664321 1 11345788888887555555 4 4999999998621 35589
Q ss_pred EEccCC-CCCCCCC--CCCCCceecCCCEEEEE
Q 047922 440 CLETQA-FPDSVNH--PNFPNTIVYPGEKYKHH 469 (478)
Q Consensus 440 ~~E~~~-~pda~n~--~~~~~~~l~pg~~~~~~ 469 (478)
||||++ +||+.+. ..=..+.|+|||+++..
T Consensus 250 alEP~T~~p~~~~~~~~~g~l~~L~PGEs~~~~ 282 (284)
T cd09023 250 GLEPATNFPNGRAFEREQGELPTLAPGESRSYR 282 (284)
T ss_pred EEccccCCCcchHHHHHCCCcceECCCCeEEEe
Confidence 999999 9998543 11156799999976654
No 36
>PF14315 DUF4380: Domain of unknown function (DUF4380)
Probab=95.41 E-value=0.64 Score=45.99 Aligned_cols=140 Identities=13% Similarity=0.087 Sum_probs=73.3
Q ss_pred EEEEEEEeCCEEEEEe-ccCceEEEEEeeCCCCceeeEEecCCChhhcccCCCcccceeecCCCccCCcEEEECCEEEEe
Q 047922 10 VKFYELKKGDFSVKFT-NWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTLDGTHYKL 88 (478)
Q Consensus 10 ~~~~~L~n~~~~v~v~-~~Ga~i~~l~~~d~~G~~~dvv~g~~~~~~y~~~~~~~G~~lgp~anRI~~g~~~~~G~~y~L 88 (478)
..+++|+|+.+++.|+ +.|++|.++.+.+ | .+++. -.... . ..........| ++.+| .+.+.-
T Consensus 4 ~~~~~l~N~~i~l~Vtp~~GgRIl~~~~~g--~--~N~~~-~~~~~---~-~~~~~~~~~~~--~~~GG-----hrlW~~ 67 (274)
T PF14315_consen 4 GNCLRLSNGDIELIVTPDVGGRILSFGLNG--G--ENLFG-EANEI---Q-PAPGVSGDSGW--INYGG-----HRLWPS 67 (274)
T ss_pred ceEEEEECCCEEEEEecCCCCEEEEEEeCC--C--ceEEe-ecccc---c-cccccCCcccc--cCCCc-----ceeecC
Confidence 3578999999999995 6999999999853 4 57662 11000 0 00000001111 11111 233444
Q ss_pred ecCCCCCCCCCCCC--CCCccceEEEEEecCCCCCEEEEEEEeCCCCCCCCceeEEEEEEEEeCCC-eEEEEEEEEeCCC
Q 047922 89 VANEKSNMLHGGPK--GFSDVIWKVKTYENEGPTPKIVFSYHSTDGEEGFPGDLDVTVSYSLTSEK-ELSVKMKAKARNK 165 (478)
Q Consensus 89 ~~N~~~n~lHG~~~--g~~~~~w~v~~~~~~~~~~~v~l~~~~~~~~~gyP~~~~~~v~y~L~~~~-~l~i~~~~~n~~~ 165 (478)
|.+.....-..... =++...|++.. .. ..|+|+-... .. -.+.++.+|+|..+. .+.|..+++|. .
T Consensus 68 Pe~~~r~~~~~~~Pd~~ld~~p~~~~~-~~----~~v~L~s~~~-~~----tgiq~~~~i~l~~~~~~i~v~~~i~N~-~ 136 (274)
T PF14315_consen 68 PENPPRTSKWVWPPDPVLDNGPYEVEI-DD----DGVRLTSPPS-PK----TGIQKERTITLDADRPSIEVTHRITNI-G 136 (274)
T ss_pred CCCccccccccCCCcccccCCceeEEE-cC----CEEEEecCCC-Cc----cCcEEEEEEEECCCCCEEEEEEEEEeC-C
Confidence 44221111111211 12356777776 22 4565554322 12 246788888897533 59999999994 3
Q ss_pred ceeEeccCCcccc
Q 047922 166 ATPVNLAQHSYWN 178 (478)
Q Consensus 166 ~~p~nlg~HpyFn 178 (478)
+.|+. ++++++
T Consensus 137 ~~~~~--~a~W~~ 147 (274)
T PF14315_consen 137 DWPVE--WAPWSV 147 (274)
T ss_pred CCcce--eeeeee
Confidence 33332 455554
No 37
>cd09269 deoxyribose_mutarotase deoxyribose mutarotase_like. Salmonella enterica serovar Typhi DeoM (earlier named as DeoX) is a mutarotase with high specificity for deoxyribose. It is encoded by one of four genes beonging to the deoK operon. This operon has also been found in Escherichia coli where it is more common in pathogenic than in commensal strains and is associated with pathogenicity. It has been found on a pathogenicity island from a human blood isolate AL863 and confers the ability to use deoxyribose as a carbon source; deoxyribose is not fermented by non-pathogenic E.coli K-12. Proteins in this family are members of the aldose-1-epimerase superfamily. Aldose 1-epimerases, or mutarotases, are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechani
Probab=94.45 E-value=0.77 Score=45.91 Aligned_cols=28 Identities=11% Similarity=0.219 Sum_probs=25.9
Q ss_pred eeeeEEEEEee-ccCCcceeecccceeec
Q 047922 288 EELSVKMKAKA-RNKATPVNLAQHSYWNL 315 (478)
Q Consensus 288 ~~l~v~~~a~~-~~~~~p~~~~~H~yfnl 315 (478)
..++|+++.+| +..++|++++.|+||-.
T Consensus 118 ~~l~i~~~VtN~g~~p~p~~~~~H~nfg~ 146 (293)
T cd09269 118 ALFDIGMDVTNLSAQPMPLMYMCHMNYAY 146 (293)
T ss_pred CEEEEEEEEEECCCCCChhhEecccccCC
Confidence 57999999999 88999999999999975
No 38
>PF14486 DUF4432: Domain of unknown function (DUF4432); PDB: 3TY1_A.
Probab=94.44 E-value=0.24 Score=49.77 Aligned_cols=152 Identities=16% Similarity=0.161 Sum_probs=78.9
Q ss_pred eeeeEEEEEee-ccCCcceeecccceeecCCCCCCCe-eceEEEEeccceeccCCCCCcccceeccCCCCcc-cCCceec
Q 047922 288 EELSVKMKAKA-RNKATPVNLAQHSYWNLGGHNSGDI-LSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYD-FLQPHAI 364 (478)
Q Consensus 288 ~~l~v~~~a~~-~~~~~p~~~~~H~yfnl~g~~~~~v-~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~D-f~~~~~i 364 (478)
..++|+.+.+| +..++|+++..|+ |++.. =+ ++.+|.++...+.+.|++.-.-.. .++ +..|..
T Consensus 141 ~~i~i~d~VtN~~~~p~p~m~lyH~--N~G~p---ll~eg~ri~~p~~~~~~~~~~a~~~~~-------~~~~~~~P~~- 207 (302)
T PF14486_consen 141 NTIRIEDRVTNLGFQPMPLMYLYHM--NFGYP---LLDEGARIVAPTKEVTPRDDRAAEGIA-------DWDRMPAPQP- 207 (302)
T ss_dssp SEEEEEEEEEE-SSS-EEEEEEEEE--EE-TT---T-STT-EEE--EEEEEESSGGGGGGST-------TTTB---S-T-
T ss_pred cEEEEEEEEEECCCCCchhHHhhhh--ccCcc---ccCCCcEEEcCcccccCCchhhhcCCc-------cceecCCCCC-
Confidence 46889999999 8899999999995 44322 11 467777777777777643222111 011 111111
Q ss_pred cccccCCCcccceeEEeccCCCcccceeEEEEEcCCCCcEEEEEe---cCCeeEEEeCCccccccCCCCeeeecceEEEE
Q 047922 365 GSSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLA---DQPGVQYYTGGQIKEVRGKGGFVYKKHAGLCL 441 (478)
Q Consensus 365 ~~~~~~~~~g~D~~f~~~~~~~~~~~~~~a~l~~~~sg~~l~v~t---~~p~~qvyT~~~~~~~~~~~~~~~~~~~~i~~ 441 (478)
+ .=+.+|..+-..+ ......+.|.+++.|+.+.|.= ..|.+...-.-. ...-.++|
T Consensus 208 ~--------~~E~Vy~~~~~~d-~~G~~~~~l~n~~~g~g~~v~f~~~~lP~~~~Wk~~~------------~~~yv~gL 266 (302)
T PF14486_consen 208 G--------FPEQVYFHDLLAD-EDGWAHAALVNPDGGLGFEVRFDTSQLPYLTQWKNYG------------GGEYVLGL 266 (302)
T ss_dssp T-----------EEEEEEE----TTSEEEEEEE-SSSS-EEEEEEETTTS-EEEEEEEES-------------T-EEEEE
T ss_pred C--------CCcEEEEeccccc-CCCcEEEEEECCCCCcEEEEEEchHHCChhHhheeCC------------CCEeEEEE
Confidence 0 1134555432221 1235668888899877777663 477776544321 13568999
Q ss_pred ccCC-CCCCCCCCC-C-CCceecCCCEEEEEEEEE
Q 047922 442 ETQA-FPDSVNHPN-F-PNTIVYPGEKYKHHMLYK 473 (478)
Q Consensus 442 E~~~-~pda~n~~~-~-~~~~l~pg~~~~~~~~y~ 473 (478)
||.+ +|+...... - ....|+|||+.+..+.+.
T Consensus 267 EP~T~~p~g~~~~~~~G~l~~L~pge~~~~~l~~~ 301 (302)
T PF14486_consen 267 EPATCRPEGRAAAREAGTLPMLAPGESREFSLEFG 301 (302)
T ss_dssp EEESS-SS-HHHHHHTT--EEE-TT-EEEEEEEEE
T ss_pred ecccCCCCCHHHHHhCCCcceECCCCeEEEEEEec
Confidence 9999 887654311 1 256999999888777665
No 39
>TIGR03593 yidC_nterm membrane protein insertase, YidC/Oxa1 family, N-terminal domain. Essentially all bacteria have a member of the YidC family, whose C-terminal domain is modeled by TIGR03592. The two copies are found in endospore-forming bacteria such as Bacillus subtilis appear redundant during vegetative growth, although the member designated spoIIIJ (stage III sporulation protein J) has a distinct role in spore formation. YidC, its mitochondrial homolog Oxa1, and its chloroplast homolog direct insertion into the bacterial/organellar inner (or only) membrane. This model describes an N-terminal sequence region, including a large periplasmic domain lacking in YidC members from Gram-positive species. The multifunctional YidC protein acts both with and independently of the Sec system.
Probab=93.44 E-value=1.4 Score=45.34 Aligned_cols=28 Identities=21% Similarity=0.183 Sum_probs=25.5
Q ss_pred EEEEEEeCCEEEEEeccCceEEEEEeeC
Q 047922 11 KFYELKKGDFSVKFTNWGATIVSVFLPD 38 (478)
Q Consensus 11 ~~~~L~n~~~~v~v~~~Ga~i~~l~~~d 38 (478)
..++|+|+.++++|.+.||.|.++.+++
T Consensus 74 ~~i~v~td~~~~~is~~Gg~i~~~~Lk~ 101 (366)
T TIGR03593 74 KRITVKTDVLRASISTKGGDIDSLELKK 101 (366)
T ss_pred CeEEEECCeEEEEEeCCCceeeeecccc
Confidence 4689999999999999999999999863
No 40
>cd09020 D-hex-6-P-epi_like D-hexose-6-phosphate epimerase-like. D-Hexose-6-phosphate epimerase Ymr099c from Saccharomyces cerevisiae belongs to the large superfamily of aldose-1-epimerases. Its active site is very similar to the catalytic site of galactose mutarotase, the best studied member of the superfamily. It also contains the conserved glutamate and histidine residues that have been shown in galactose mutarotase to be critical for catalysis, the glutamate serving as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen. In addition Ymr099c contains 2 conserved arginine residues which are involved in phosphate binding, and exhibits hexose-6-phosphate mutarotase activity on glucose-6-P, galactose-6-P and mannose-6-P.
Probab=93.35 E-value=0.063 Score=52.96 Aligned_cols=144 Identities=17% Similarity=0.217 Sum_probs=89.7
Q ss_pred eeeeeEEEEEee-ccCCcceeecccceeecCCCCCCCeeceEEEEecc-ceeccCCCCCcccceeccCCCCcccCCceec
Q 047922 287 KEELSVKMKAKA-RNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFAS-SYTPVDDQLIPTGKIETVEGTPYDFLQPHAI 364 (478)
Q Consensus 287 ~~~l~v~~~a~~-~~~~~p~~~~~H~yfnl~g~~~~~v~~~~l~~~a~-~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i 364 (478)
+.+|+++++++| ++++.|+++++||||++++ +.+..|...+. .++.-- .+........++.|.
T Consensus 119 ~~~L~~~l~v~N~g~~~~p~~~g~HpYf~v~d-----~~~~~v~gl~~~~y~d~~-----~~~~~~~~~~~~~~~----- 183 (269)
T cd09020 119 FDTLELELTVTNTGDKPFSFTAALHTYFRVSD-----IEQVRVEGLEGATYLDKL-----TDQREKVQGGAVTFD----- 183 (269)
T ss_pred CCcEEEEEEEECCCCCCeEehhccCeeEecCC-----ccccEEeCCCCCceEEcC-----CCccccccCCceEEC-----
Confidence 368999999999 7899999999999999854 34555554333 333211 111111111112221
Q ss_pred cccccCCCcccceeEEeccCCCcccceeEEEEEcCCCCcEEEEEe-cCCeeEEEeCCccccccCCCCeeee---cceEEE
Q 047922 365 GSSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLA-DQPGVQYYTGGQIKEVRGKGGFVYK---KHAGLC 440 (478)
Q Consensus 365 ~~~~~~~~~g~D~~f~~~~~~~~~~~~~~a~l~~~~sg~~l~v~t-~~p~~qvyT~~~~~~~~~~~~~~~~---~~~~i~ 440 (478)
..+|..|.-.. ..+++.++..+++|.+.. +.+.++|+++.. . ..|.-..++ -..-||
T Consensus 184 --------~~~Drvy~~~~--------~~~~i~d~~~~~~i~i~~~~~~~~VVWNP~~-~--~~~~~~d~~~~~~~~fvC 244 (269)
T cd09020 184 --------GEVDRVYLNTP--------APLTIDDPAWGRRIRIEKSGSPSAVVWNPWI-E--KAARMADFPDDGYRRMVC 244 (269)
T ss_pred --------CccceEEeCCC--------CCEEEEcCCCCcEEEEEecCCCCEEEeCcch-h--hccccccCCccccceEEE
Confidence 25777776321 235778888899999986 578999999842 1 011111111 245699
Q ss_pred EccCCCCCCCCCCCCCCceecCCCEEEEEEEE
Q 047922 441 LETQAFPDSVNHPNFPNTIVYPGEKYKHHMLY 472 (478)
Q Consensus 441 ~E~~~~pda~n~~~~~~~~l~pg~~~~~~~~y 472 (478)
|||...- ..++|.|||.++...++
T Consensus 245 vEp~~~~--------~~~~L~pG~~~~~~~~i 268 (269)
T cd09020 245 VEAANVA--------DPVTLAPGESHTLSQTI 268 (269)
T ss_pred ECeeecC--------CCEEECCCCCEEEEEEE
Confidence 9996631 45689999998877654
No 41
>PF14849 YidC_periplas: YidC periplasmic domain; PDB: 3BS6_B 3BLC_B.
Probab=91.32 E-value=3 Score=40.77 Aligned_cols=26 Identities=31% Similarity=0.339 Sum_probs=21.8
Q ss_pred EEEEEeCCEEEEEeccCceEEEEEee
Q 047922 12 FYELKKGDFSVKFTNWGATIVSVFLP 37 (478)
Q Consensus 12 ~~~L~n~~~~v~v~~~Ga~i~~l~~~ 37 (478)
+++|+|+.++++|++.||.|.++.++
T Consensus 1 ~v~ven~~~~~~~s~~GG~i~~~~Lk 26 (270)
T PF14849_consen 1 RVTVENDLFKVTFSSKGGRIKSVELK 26 (270)
T ss_dssp -EEEE-SS-EEEEETBTTEEEEEEEE
T ss_pred CEEEECCCEEEEEECCCCeEEEEEcC
Confidence 47899999999999999999999986
No 42
>KOG1594 consensus Uncharacterized enzymes related to aldose 1-epimerase [Carbohydrate transport and metabolism]
Probab=90.62 E-value=3.6 Score=39.92 Aligned_cols=143 Identities=18% Similarity=0.251 Sum_probs=77.2
Q ss_pred eeeeeEEEEEee-ccCCcceeecccceeecCCCCCCCeeceEEEEeccceeccCCCCCcccceeccCCCCcccCCceecc
Q 047922 287 KEELSVKMKAKA-RNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIG 365 (478)
Q Consensus 287 ~~~l~v~~~a~~-~~~~~p~~~~~H~yfnl~g~~~~~v~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~ 365 (478)
+..|+...+.+| .+++--|+++.|+||..+.. ..++ +..-.-+...+++. .....-
T Consensus 144 ~g~Lt~~~rV~Ntd~KpFsF~~alHtYf~vsdi-----sevr--veGL~tldylD~~~----------------~~~~~t 200 (305)
T KOG1594|consen 144 DGELTLTSRVRNTDSKPFSFSFALHTYFRVSDI-----SEVR--VEGLETLDYLDNLK----------------NRERFT 200 (305)
T ss_pred CCceEEEEEeecCCCCceEEEeEeeeeEeeccc-----ceEE--Eecccccccccccc----------------chhhcc
Confidence 345777777788 56888899999999998643 2222 22111111111111 111111
Q ss_pred cccc--CCCcccceeEEeccCCCcccceeEEEEEcCCCCcEEEEEe-cCCeeEEEeCCccccccCCCCeeee---cceEE
Q 047922 366 SSID--KLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLA-DQPGVQYYTGGQIKEVRGKGGFVYK---KHAGL 439 (478)
Q Consensus 366 ~~~~--~~~~g~D~~f~~~~~~~~~~~~~~a~l~~~~sg~~l~v~t-~~p~~qvyT~~~~~~~~~~~~~~~~---~~~~i 439 (478)
+.-. ....-.|-.|+-. + ...| +.+...|++|.+.- +.|-.+|..+ |..... .-..++ =..-+
T Consensus 201 E~~davTF~~e~DrvYl~t------p-~e~a-I~dh~~krti~l~k~g~pDaVVWNP-W~kksk--~maD~gde~Y~~ml 269 (305)
T KOG1594|consen 201 EQRDAVTFNSEVDRVYLNT------P-TELA-IFDHEKKRTIVLKKEGLPDAVVWNP-WDKKSK--TMADFGDEDYKHML 269 (305)
T ss_pred ccCceEeeccceeeEEecC------C-ceEE-EEEeccccEEEEeccCCCceEEeCh-hHhhhh--hhhhccccccceeE
Confidence 1100 0123566666632 1 2334 44568999998884 6888776654 432110 001111 23579
Q ss_pred EEccCCCCCCCCCCCCCCceecCCCEEEEEEE
Q 047922 440 CLETQAFPDSVNHPNFPNTIVYPGEKYKHHML 471 (478)
Q Consensus 440 ~~E~~~~pda~n~~~~~~~~l~pg~~~~~~~~ 471 (478)
|+|+-.. . ..++|+||+.|+..-.
T Consensus 270 CVe~a~v----~----~pI~L~PG~eW~g~q~ 293 (305)
T KOG1594|consen 270 CVESAAV----E----SPITLKPGEEWKGRQL 293 (305)
T ss_pred Eeccccc----C----CceeecCCccceeEEE
Confidence 9997664 2 3469999999887644
No 43
>PRK01318 membrane protein insertase; Provisional
Probab=87.18 E-value=13 Score=40.16 Aligned_cols=27 Identities=11% Similarity=0.177 Sum_probs=25.3
Q ss_pred EEEEEeCCEEEEEeccCceEEEEEeeC
Q 047922 12 FYELKKGDFSVKFTNWGATIVSVFLPD 38 (478)
Q Consensus 12 ~~~L~n~~~~v~v~~~Ga~i~~l~~~d 38 (478)
.++++|+.++++|.+.||.|.++.+++
T Consensus 40 ~i~v~td~~~~~is~~Gg~i~~~~Lk~ 66 (521)
T PRK01318 40 RITVETDVLRLSIDTKGGRIDDLLLKK 66 (521)
T ss_pred EEEEEcCcEEEEEECCCCeeeeeeccC
Confidence 789999999999999999999999864
No 44
>COG0676 Uncharacterized enzymes related to aldose 1-epimerase [Carbohydrate transport and metabolism]
Probab=81.74 E-value=16 Score=36.00 Aligned_cols=127 Identities=17% Similarity=0.225 Sum_probs=62.9
Q ss_pred eeeeeeEEEEEeeccCCcceeecccceeecCCCCCCCeeceEEEEeccceeccCCCCCcccceeccCCCCcccCCceecc
Q 047922 286 IKEELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIG 365 (478)
Q Consensus 286 ~~~~l~v~~~a~~~~~~~p~~~~~H~yfnl~g~~~~~v~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~ 365 (478)
+...|+++.++.+... +..+.|+||+.++-.. -++ .++++-.+..+-+.. ..++..
T Consensus 136 ~g~~le~~l~~~~~~s---~~~AlHtYF~VgDi~q-----v~V------------~GL~~~~~~~~~~~~----~~v~~~ 191 (287)
T COG0676 136 FGETLELELESYGEES---FQAALHTYFRVGDIEQ-----VEV------------SGLGGVCIDKVLNAE----EEVTQH 191 (287)
T ss_pred ccceEEEEEEecChhH---HHHhhcceEEecchhh-----eEe------------ccCCceehhhhhhce----eeccCC
Confidence 3456777777776322 9999999999975532 111 111111111000000 000000
Q ss_pred ccccCCCcccceeEEeccCCCcccceeEEEEEcCCCCcEEEEEe-cCCeeEEEeCCccccccCC-CCeeeecceEEEEcc
Q 047922 366 SSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLA-DQPGVQYYTGGQIKEVRGK-GGFVYKKHAGLCLET 443 (478)
Q Consensus 366 ~~~~~~~~g~D~~f~~~~~~~~~~~~~~a~l~~~~sg~~l~v~t-~~p~~qvyT~~~~~~~~~~-~~~~~~~~~~i~~E~ 443 (478)
.+..++...|-.|+..+ ....+.++.=.|.++|.. +...+++.-+-. ....+. ....-+=..-+||||
T Consensus 192 -g~~~~~~~~DriY~~~~--------~~~~I~D~~~~R~I~l~~~~~~~~VvWNP~~-~~s~~M~d~~d~gyq~mlCvEt 261 (287)
T COG0676 192 -GIVTFPGETDRIYLNPE--------PCSVIVDPALNRIITLEHQGHSSTVVWNPGH-AKSSSMADMPDDGYQTMLCVET 261 (287)
T ss_pred -CceeeCCCccEEEEcCC--------CceEEecCcceEEEEEEecCCCCeEEECCCc-cccccccccccccceEEEEEee
Confidence 00112335666666432 234566666688999987 466777765542 111111 001113456899999
Q ss_pred CCC
Q 047922 444 QAF 446 (478)
Q Consensus 444 ~~~ 446 (478)
-..
T Consensus 262 a~~ 264 (287)
T COG0676 262 ARV 264 (287)
T ss_pred ccc
Confidence 884
No 45
>PF02929 Bgal_small_N: Beta galactosidase small chain; InterPro: IPR004199 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Beta-galactosidase enzymes (3.2.1.23 from EC) belong to several glycoside hydrolase families: GH1 from CAZY, GH2 from CAZY, GH35 from CAZY and GH42 from CAZY. Beta-galactosidase is the product of the lac operon Z gene of Escherichia coli. This enzyme catalyses the hydrolysis of the disaccharide lactose to galactose and glucose, and can also convert lactose to allolactose, the inducer of the lac operon. This domain is found in single chain beta-galactosidases, which are comprised of five domains. The active site is located in a deep pocket built around the central alpha-beta barrel, with the other domains conferring specificity for a disaccharide substrate. This entry represents domain 5 of glycoside hydrolase family 2, which contains an N-terminal loop that swings towards the active site upon the deep binding of a ligand to produce a closed conformation []. This domain is also found in the amino-terminal portion of the small chain of dimeric beta-galactosidases.; GO: 0004565 beta-galactosidase activity, 0005975 carbohydrate metabolic process, 0009341 beta-galactosidase complex; PDB: 1JZ3_D 1JYY_H 1GHO_P 3VD9_B 3I3E_B 3T0B_A 3T09_C 1F4A_D 3VDC_C 3VDB_D ....
Probab=62.32 E-value=50 Score=32.58 Aligned_cols=30 Identities=23% Similarity=0.346 Sum_probs=24.2
Q ss_pred EEEeCCEEEEEeccCceEEEEEeeCCCCceeeEEe
Q 047922 14 ELKKGDFSVKFTNWGATIVSVFLPDKDGKVDDVVL 48 (478)
Q Consensus 14 ~L~n~~~~v~v~~~Ga~i~~l~~~d~~G~~~dvv~ 48 (478)
||+++..++.+...-+.|.|+.+ +| +++|.
T Consensus 1 tV~g~~f~~~Fdk~~G~l~s~~~---~g--~~ll~ 30 (276)
T PF02929_consen 1 TVSGKDFSYVFDKKTGTLTSYKY---NG--KELLK 30 (276)
T ss_dssp -EEETTEEEEEETTTTCEEEEEE---TT--EEEEC
T ss_pred CCccCCEEEEEECCCCeEEEEEE---CC--EEeec
Confidence 57788999999887889999998 46 67766
No 46
>PF06045 Rhamnogal_lyase: Rhamnogalacturonate lyase family; InterPro: IPR010325 Rhamnogalacturonate lyase degrades the rhamnogalacturonan I (RG-I) backbone of pectin []. This family contains mainly members from plants, but also contains the plant pathogen Erwinia chrysanthemi.
Probab=50.05 E-value=2.3e+02 Score=26.76 Aligned_cols=34 Identities=21% Similarity=0.264 Sum_probs=27.6
Q ss_pred EEEEEeCCEEEEEeccCceEEEEEeeCCCCceeeEEecC
Q 047922 12 FYELKKGDFSVKFTNWGATIVSVFLPDKDGKVDDVVLGY 50 (478)
Q Consensus 12 ~~~L~n~~~~v~v~~~Ga~i~~l~~~d~~G~~~dvv~g~ 50 (478)
.++|.|+.++|++..=|+.|++|+. +| .+-|+..
T Consensus 17 ~VvldNGiVqVtls~p~G~VtgIkY---nG--i~NLle~ 50 (203)
T PF06045_consen 17 QVVLDNGIVQVTLSKPGGIVTGIKY---NG--IDNLLEV 50 (203)
T ss_pred EEEEECCEEEEEEcCCCceEEEEEE---CC--Eehhhcc
Confidence 4789999999999999999999998 47 3445533
No 47
>PF05660 DUF807: Coxiella burnetii protein of unknown function (DUF807); InterPro: IPR008525 This family consists of several proteins of unknown function from Coxiella burnetii (the causative agent of a zoonotic disease called Q fever).
Probab=45.62 E-value=18 Score=30.95 Aligned_cols=89 Identities=13% Similarity=0.248 Sum_probs=48.3
Q ss_pred ecCCChhhcccCCCcccceeecCCCccCCcEEEECCEEEEeecCCCCCCCCCCCCCCCccceEEEEEecCCCCCEEEEEE
Q 047922 48 LGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTLDGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSY 127 (478)
Q Consensus 48 ~g~~~~~~y~~~~~~~G~~lgp~anRI~~g~~~~~G~~y~L~~N~~~n~lHG~~~g~~~~~w~v~~~~~~~~~~~v~l~~ 127 (478)
.|.-+++.|.+++ |++..|..-.|+-|+|++.=-...=-+|-.+-..|+-..-=-+..|--... -.|.|++
T Consensus 14 igpi~p~syfgn~---gai~~p~I~k~aTGeytItfls~r~vqetQp~~vhi~v~d~~n~~fc~r~~------K~v~Fty 84 (142)
T PF05660_consen 14 IGPIDPDSYFGNP---GAIMDPEIEKIATGEYTITFLSARNVQETQPAVVHISVMDDANETFCPRVT------KAVKFTY 84 (142)
T ss_pred cCCcCchhccCCC---ccccChhhhhhccCceEEEEEeccchhhcCCceEEEEEEecccccccccce------eeeEEEE
Confidence 4555666666654 699999999999999986321111111123445566321000111111111 2477877
Q ss_pred EeCCCCCCCCceeEEEEEEE
Q 047922 128 HSTDGEEGFPGDLDVTVSYS 147 (478)
Q Consensus 128 ~~~~~~~gyP~~~~~~v~y~ 147 (478)
.-. ...|||...+++..+
T Consensus 85 ~Pe--ns~fpwK~m~qIai~ 102 (142)
T PF05660_consen 85 EPE--NSDFPWKGMLQIAIT 102 (142)
T ss_pred CCc--cCCCChhhhhhheee
Confidence 642 233999988876543
No 48
>PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed
Probab=33.83 E-value=6.6e+02 Score=29.87 Aligned_cols=23 Identities=13% Similarity=0.395 Sum_probs=19.7
Q ss_pred eEEEEEEEEeCCCeEEEEEEEEe
Q 047922 140 LDVTVSYSLTSEKELSVKMKAKA 162 (478)
Q Consensus 140 ~~~~v~y~L~~~~~l~i~~~~~n 162 (478)
+.++++|++..++.+.|++++..
T Consensus 820 ~~~~~~y~i~~~G~i~v~~~~~~ 842 (1021)
T PRK10340 820 MRCTYIYRIAADGQVNVALSGER 842 (1021)
T ss_pred eEEEEEEEEcCCCEEEEEEEEEE
Confidence 67889999988888999998875
No 49
>COG3175 COX11 Cytochrome oxidase assembly factor [Posttranslational modification, protein turnover, chaperones]
Probab=32.97 E-value=77 Score=29.22 Aligned_cols=46 Identities=15% Similarity=0.416 Sum_probs=32.1
Q ss_pred CCcEEEEEecCCeeEEEeCCcccc-----------ccCCCCeeeecceEEEEccCCC
Q 047922 401 SGRVMELLADQPGVQYYTGGQIKE-----------VRGKGGFVYKKHAGLCLETQAF 446 (478)
Q Consensus 401 sg~~l~v~t~~p~~qvyT~~~~~~-----------~~~~~~~~~~~~~~i~~E~~~~ 446 (478)
-++.|.|.-.+..+.+|.+.++.+ .++..|.-+.|=.|||+|-|+.
T Consensus 83 ~q~~v~v~pGet~~~~y~a~N~sd~~itg~A~~nv~P~~Ag~YF~KveCFCFteq~L 139 (195)
T COG3175 83 VQREVYVRPGETNLIFYEAENLSDKPITGQATYNVAPGQAGAYFNKVECFCFTEQTL 139 (195)
T ss_pred cCceeEeccCceEEEEEEEecCCCCCceeEEecccChhHhhhheeeeeEEEeeeccc
Confidence 356777777788888888876532 1344555677888999998873
No 50
>PRK09525 lacZ beta-D-galactosidase; Reviewed
Probab=29.09 E-value=8.1e+02 Score=29.17 Aligned_cols=38 Identities=11% Similarity=0.157 Sum_probs=27.3
Q ss_pred EEEEEeCCEEEEEeccCceEEEEEeeCCCCceeeEEecCCChh
Q 047922 12 FYELKKGDFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVD 54 (478)
Q Consensus 12 ~~~L~n~~~~v~v~~~Ga~i~~l~~~d~~G~~~dvv~g~~~~~ 54 (478)
.++|+++..++.+...=+.|.++.. +| ++++.....+.
T Consensus 750 ~~~i~~~~~~~~f~~~~G~l~s~~~---~g--~~~l~~~~~~~ 787 (1027)
T PRK09525 750 DFCIELGNQRWQFNRQSGLLSQWWV---GG--KEQLLTPLRDQ 787 (1027)
T ss_pred eEEEEECCEEEEEECCCceEEEEEE---CC--EEeeccCCcCc
Confidence 4667777888888877788999987 46 57776543333
No 51
>KOG2540 consensus Cytochrome oxidase assembly factor COX11 [Posttranslational modification, protein turnover, chaperones]
Probab=21.12 E-value=1.1e+02 Score=29.11 Aligned_cols=45 Identities=20% Similarity=0.454 Sum_probs=32.2
Q ss_pred CCcEEEEEecCCeeEEEeCCcccc-----------ccCCCCeeeecceEEEEccCC
Q 047922 401 SGRVMELLADQPGVQYYTGGQIKE-----------VRGKGGFVYKKHAGLCLETQA 445 (478)
Q Consensus 401 sg~~l~v~t~~p~~qvyT~~~~~~-----------~~~~~~~~~~~~~~i~~E~~~ 445 (478)
..+.+.|.-.+.++-+||+.+... .+++.+.-+.|=++||+|.|.
T Consensus 153 qQrEiyV~PGEtALaFYta~N~sdkpIiGvstYni~P~~Aa~YFnKiqCFCFEEQ~ 208 (269)
T KOG2540|consen 153 QQREIYVLPGETALAFYTAENPSDKPIIGVSTYNITPGQAAVYFNKIQCFCFEEQK 208 (269)
T ss_pred cceEEEEcCCcceeeeEeccCCCCCCceeeEeeccCccHhhhheeceeEEeehhhc
Confidence 456667777788888898875422 134445567789999999997
Done!