Query 047922
Match_columns 478
No_of_seqs 246 out of 1887
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 07:31:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047922.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047922hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3imh_A Galactose-1-epimerase; 100.0 1.6E-72 5.5E-77 567.4 28.5 320 3-476 11-331 (338)
2 1nsx_A Galactose mutarotase; e 100.0 1.7E-68 6E-73 542.5 29.5 326 9-478 11-340 (347)
3 1lur_A Aldose 1-epimerase; vit 100.0 1.6E-68 5.5E-73 541.6 29.0 327 8-477 11-338 (339)
4 1snz_A Aldose 1-epimerase; mut 100.0 7.1E-68 2.4E-72 538.2 32.7 326 6-477 16-344 (344)
5 1yga_A Hypothetical 37.9 kDa p 100.0 1.5E-61 5.3E-66 491.5 26.1 325 7-476 7-342 (342)
6 1z45_A GAL10 bifunctional prot 100.0 6.3E-61 2.1E-65 530.4 30.1 324 6-475 369-699 (699)
7 3nre_A Aldose 1-epimerase; str 100.0 5.9E-56 2E-60 440.2 26.0 281 10-476 2-290 (291)
8 3os7_A Galactose mutarotase-li 100.0 3.6E-54 1.2E-58 436.8 28.8 307 9-476 17-340 (341)
9 3mwx_A Aldose 1-epimerase; str 100.0 1.7E-52 5.9E-57 422.3 26.1 298 9-477 13-324 (326)
10 3q1n_A Galactose mutarotase re 100.0 1.5E-46 5.1E-51 373.4 26.6 278 12-473 2-292 (294)
11 3dcd_A Galactose mutarotase re 100.0 4.3E-44 1.5E-48 357.4 28.4 277 11-475 1-292 (307)
12 2hta_A Putative enzyme related 100.0 1.1E-38 3.8E-43 319.1 22.8 261 9-475 40-307 (309)
13 3k25_A SLR1438 protein; struct 100.0 6.8E-38 2.3E-42 310.4 27.1 270 7-476 8-288 (289)
14 2cir_A Hexose-6-phosphate muta 100.0 2.4E-37 8.1E-42 307.8 11.8 149 10-181 7-166 (297)
15 1jov_A HI1317; hypothetical pr 99.8 3.5E-19 1.2E-23 174.3 22.8 147 9-197 20-168 (270)
16 3imh_A Galactose-1-epimerase; 99.7 8.8E-19 3E-23 176.1 6.8 77 288-369 154-230 (338)
17 1nsx_A Galactose mutarotase; e 99.7 6.6E-18 2.3E-22 170.9 7.4 80 288-368 149-229 (347)
18 1snz_A Aldose 1-epimerase; mut 99.6 1.4E-16 4.9E-21 161.1 7.1 80 288-368 157-236 (344)
19 1lur_A Aldose 1-epimerase; vit 99.6 2.3E-16 7.8E-21 159.2 8.2 78 288-368 151-228 (339)
20 3ty1_A Hypothetical aldose 1-e 99.6 2.1E-14 7.1E-19 146.9 22.1 168 9-203 47-236 (384)
21 1yga_A Hypothetical 37.9 kDa p 99.6 1E-15 3.5E-20 154.7 7.6 92 288-383 153-247 (342)
22 1z45_A GAL10 bifunctional prot 99.6 9.2E-16 3.1E-20 169.1 7.9 91 288-382 514-605 (699)
23 3nre_A Aldose 1-epimerase; str 99.5 3.4E-15 1.2E-19 147.4 6.6 73 287-367 125-198 (291)
24 3mwx_A Aldose 1-epimerase; str 99.3 3E-13 1E-17 135.7 4.0 80 288-380 155-235 (326)
25 3os7_A Galactose mutarotase-li 99.3 6.5E-13 2.2E-17 134.0 5.7 88 288-381 162-251 (341)
26 3q1n_A Galactose mutarotase re 99.1 1.2E-10 4.2E-15 114.9 6.8 62 287-348 119-185 (294)
27 3dcd_A Galactose mutarotase re 98.9 1.1E-09 3.7E-14 108.8 5.8 78 287-367 119-198 (307)
28 2hta_A Putative enzyme related 98.7 1.8E-08 6E-13 100.1 5.8 61 287-359 159-219 (309)
29 2cir_A Hexose-6-phosphate muta 98.3 2.6E-07 8.7E-12 91.1 4.8 146 287-475 134-289 (297)
30 3k25_A SLR1438 protein; struct 97.5 6.2E-05 2.1E-09 73.7 4.2 48 287-339 140-188 (289)
31 3ty1_A Hypothetical aldose 1-e 89.7 0.22 7.6E-06 50.3 4.1 169 274-475 169-352 (384)
32 3bs6_A Inner membrane protein 86.0 2.3 7.9E-05 40.7 8.6 27 11-37 4-30 (280)
33 3blc_A Inner membrane protein 84.6 10 0.00035 37.0 12.7 27 11-37 35-61 (330)
34 1jov_A HI1317; hypothetical pr 81.5 0.99 3.4E-05 43.1 3.8 135 290-470 131-266 (270)
No 1
>3imh_A Galactose-1-epimerase; structural genomics, PSI-2, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.76A {Lactobacillus acidophilus}
Probab=100.00 E-value=1.6e-72 Score=567.36 Aligned_cols=320 Identities=25% Similarity=0.491 Sum_probs=282.0
Q ss_pred CCCCCcEEEEEEEEeC-CEEEEEeccCceEEEEEeeCCCCceeeEEecCCChhhcccCCCcccceeecCCCccCCcEEEE
Q 047922 3 DKNNSEEVKFYELKKG-DFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTL 81 (478)
Q Consensus 3 ~~~~~~~~~~~~L~n~-~~~v~v~~~Ga~i~~l~~~d~~G~~~dvv~g~~~~~~y~~~~~~~G~~lgp~anRI~~g~~~~ 81 (478)
|+.+|+.+..|+|+|+ +++|+|+++||+|+||++++ +||||||++.++|..++.++|++||||||||++|+|++
T Consensus 11 g~~~g~~v~~~tL~n~~g~~v~i~~~GA~l~sl~~~~-----~dvvlg~~~~~~y~~~~~~~G~~lgp~anRI~~g~f~~ 85 (338)
T 3imh_A 11 ERKDNKDLCEITLENDAGMAVKVLNYGATLEKVLLDG-----ENMILSLNSPEDYSKERNFLGGTVGRIAGRVRAGQWKH 85 (338)
T ss_dssp EEETTEEEEEEEEECSSSEEEEEETBTTEEEEEEETT-----EECBCCCSSGGGGGTSCCCTTCEECSBCSEEGGGEEEE
T ss_pred cccCCeEEEEEEEECCCcEEEEEecCCcEEEEEEECC-----EEEEecCCChHHhccCCCeEeeEEEeeCCEecCCEEEE
Confidence 4557899999999998 69999999999999999963 79999999999999888899999999999999999999
Q ss_pred CCEEEEeecCCCCCCCCCCCCCCCccceEEEEEecCCCCCEEEEEEEeCCCCCCCCceeEEEEEEEEeCCCeEEEEEEEE
Q 047922 82 DGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHSTDGEEGFPGDLDVTVSYSLTSEKELSVKMKAK 161 (478)
Q Consensus 82 ~G~~y~L~~N~~~n~lHG~~~g~~~~~w~v~~~~~~~~~~~v~l~~~~~~~~~gyP~~~~~~v~y~L~~~~~l~i~~~~~ 161 (478)
+|++|+|++|+++|+||||+ ||+++.|+++.... .+.++|+|++.++++++||||+++++|+|+|+++++|.|+|+|+
T Consensus 86 ~G~~y~L~~N~g~n~LHGg~-g~~~~~W~v~~~~~-~~~~~v~l~l~s~d~~~gyPg~~~~~vtY~L~~~~~L~i~~~a~ 163 (338)
T 3imh_A 86 GNEIHQLPLNDGDNHIHGGI-GTDMHVWDFRPSCD-SEHARVDLTLFDPDGNNDYPGNLKLHARYELDNENNLHYLLEAV 163 (338)
T ss_dssp TTEEEECCCCBTTBEETTSS-CGGGSBCEEEEEEC-SSEEEEEEEEEECTTGGGCCSCEEEEEEEEEETTSEEEEEEEEE
T ss_pred CCEEEECCCCCCCcCCCCCC-CcCCceEEEEeeee-cCCCEEEEEEECCccccCCCeEEEEEEEEEEecCCeEEEEEEEe
Confidence 99999999999999999999 99999999965322 22368999999998999999999999999999668999999999
Q ss_pred eCCCceeEeccCCcccccCCCCCCCccCeEEEEeCceEEeeCCCCCCCCceeccCCCCCCCCCCeeecccccCCCCCcce
Q 047922 162 ARNKATPVNLAQHSYWNLGGHSSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPGGYDI 241 (478)
Q Consensus 162 n~~~~~p~nlg~HpyFnl~~~~~~~i~d~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~ 241 (478)
. +++||||+|+||||||++ ++.+|+|+|+|++++++|+++||||++.+|++|+||||.++.|++.+.....
T Consensus 164 ~-d~~tp~nlg~HpYFnL~g----~i~~~~L~i~a~~~~~~d~~~iPTG~~~~v~gt~~DFr~~~~ig~~~~~~~~---- 234 (338)
T 3imh_A 164 S-DKLTIFNPVNHTYFNLGE----RAEDLNLQMNADYYLPVDEAGLPDRGMAEVAGTAFDFRKTKRIGDALNSDDS---- 234 (338)
T ss_dssp E-SSSEECBCEECCEECTTS----CGGGCEEEECEEEECCBCTTSSBSSCCEECTTSTTCCSSCEEHHHHHTSCCH----
T ss_pred c-CCCeEEEEeeCCEEeCCC----CcCCeEEEEEcCcEEEeCCccCCcCceecCCCCcccCCCCeEcchhhhccch----
Confidence 8 999999999999999986 6899999999999999999999999999999999999999999876522100
Q ss_pred eEEecCCCCcccceeEEEEEcCCCCeEEEEEecCCceEEEcCCceeeeeeEEEEEeeccCCcceeecccceeecCCCCCC
Q 047922 242 NYVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLAQHSYWNLGGHNSG 321 (478)
Q Consensus 242 ~f~l~~~~~~~~~~~~~~l~~~~sg~~L~v~~~~p~~q~yt~~~~~~~l~v~~~a~~~~~~~p~~~~~H~yfnl~g~~~~ 321 (478)
T Consensus 235 -------------------------------------------------------------------------------- 234 (338)
T 3imh_A 235 -------------------------------------------------------------------------------- 234 (338)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CeeceEEEEeccceeccCCCCCcccceeccCCCCcccCCceeccccccCCCcccceeEEeccCCCcccceeEEEEEcCCC
Q 047922 322 DILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHDKKS 401 (478)
Q Consensus 322 ~v~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~~~~~~~~~~~~~~a~l~~~~s 401 (478)
++. ...||||||+++.. +.+|+|.+ |
T Consensus 235 -----------------------------------------q~~-----~~~g~Dh~f~l~~~------~~~a~l~~--s 260 (338)
T 3imh_A 235 -----------------------------------------QIK-----LRNGLDHPFILNGN------NPAALLSS--N 260 (338)
T ss_dssp -----------------------------------------HHH-----HHTSCEEEEEECSC------SCSEEEEC--S
T ss_pred -----------------------------------------hhc-----ccCCCCCceeecCC------ceEEEEEC--C
Confidence 000 01267788877321 24567754 9
Q ss_pred CcEEEEEecCCeeEEEeCCccccccCCCCeeeecceEEEEccCCCCCCCCCCCCCCceecCCCEEEEEEEEEEEe
Q 047922 402 GRVMELLADQPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQAFPDSVNHPNFPNTIVYPGEKYKHHMLYKFST 476 (478)
Q Consensus 402 g~~l~v~t~~p~~qvyT~~~~~~~~~~~~~~~~~~~~i~~E~~~~pda~n~~~~~~~~l~pg~~~~~~~~y~f~~ 476 (478)
||+|+|+|++|++||||+|+++.. | .|..|.+|+|||||||.+| +|+++|++++|+|||+|.++|+|+|+.
T Consensus 261 g~~l~v~t~~p~~q~YTgn~l~~~-g-~g~~~~~~~g~clE~q~~P--~n~~~f~~~vL~pGe~y~~~t~y~f~~ 331 (338)
T 3imh_A 261 KHRLIVKTNAPALVLYAGNHFNHT-G-IVNNIGQYDGITFEAQCPP--AEGNDLGQITLLPFEKFKRTVDWKFEE 331 (338)
T ss_dssp SEEEEEEESSSEEEEECCTTCCSB-T-TBTTCCTTSCEECEEESCC--CSSSCCGGGEECTTCCEEEEEEEEEEE
T ss_pred CeEEEEEeCCCEEEEeCCCCcCCC-C-CCcccCccCEEEEEccCCC--CCCCCCCCeEECCCCEEEEEEEEEECC
Confidence 999999999999999999998764 5 5788999999999999999 999999999999999999999999974
No 2
>1nsx_A Galactose mutarotase; epimerase, galactose metabolism, isomerase; HET: GAL; 1.75A {Lactococcus lactis} SCOP: b.30.5.4 PDB: 1nsz_A* 1mmu_A* 1l7k_A* 1l7j_A* 1mmx_A* 1mmy_A* 1mmz_A* 1mn0_A* 1ns0_A* 1ns4_A* 1ns8_A* 1nsr_A* 1nsu_A* 1nsv_A* 1ns7_A* 1ns2_A* 1nsm_A* 1nss_A*
Probab=100.00 E-value=1.7e-68 Score=542.54 Aligned_cols=326 Identities=27% Similarity=0.470 Sum_probs=281.4
Q ss_pred EEEEEEEEeC-CEEEEEeccCceEEEEEeeCCCCceeeEEecCCChhhcccCCCcccceeecCCCccCCcEEEECCEEEE
Q 047922 9 EVKFYELKKG-DFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTLDGTHYK 87 (478)
Q Consensus 9 ~~~~~~L~n~-~~~v~v~~~Ga~i~~l~~~d~~G~~~dvv~g~~~~~~y~~~~~~~G~~lgp~anRI~~g~~~~~G~~y~ 87 (478)
.+..|+|+|+ +++|+|+++||+|++|+ + +| ++|||||++++.|..++.++|++||||||||++|+|+++|++|+
T Consensus 11 ~~~~~tL~n~~~~~v~i~~~GA~l~sl~-~--~G--~~vvlg~~~~~~y~~~~~~~G~~lgp~anRI~~g~f~~~G~~y~ 85 (347)
T 1nsx_A 11 GSDLISLTNKAGVTISFTNLGARIVDWQ-K--DG--KHLILGFDSAKEYLEKDAYPGATVGPTAGRIKDGLVKISGKDYI 85 (347)
T ss_dssp TEEEEEEECTTSCEEEEETBTTEEEEEE-E--TT--EESBCCCSSHHHHHHTCSCTTCEECSBCSEEGGGEEEETTEEEE
T ss_pred eeEEEEEECCCceEEEEEccCcEEEEEE-E--CC--eEEEEeCCCHHHHhhCCCeEeeEEcccCCcccCCEEEECCEEEE
Confidence 5789999997 79999999999999999 3 57 46999999999998778899999999999999999999999999
Q ss_pred eecCCCCCCCCCCCCCCCccceEEEEEecCCCCCEEEEEEEeCCCCCCCCceeEEEEEEEEeCCCeEEEEEEEEeCCCce
Q 047922 88 LVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHSTDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKARNKAT 167 (478)
Q Consensus 88 L~~N~~~n~lHG~~~g~~~~~w~v~~~~~~~~~~~v~l~~~~~~~~~gyP~~~~~~v~y~L~~~~~l~i~~~~~n~~~~~ 167 (478)
|++|+++|++|||+.||+++.|+++..+++ ...+|+|++.++++++||||+++++|+|+|+++++|.|+|+|+. +++|
T Consensus 86 L~~N~~~n~lHGg~~g~~~~~W~v~~~~~~-~~~~v~l~l~s~d~~~gyPg~~~~~vtY~L~~~~~L~i~~~a~~-d~~t 163 (347)
T 1nsx_A 86 LNQNEGPQTLHGGEESIHTKLWTYEVTDLG-AEVQVKFSLVSNDGTNGYPGKIEMSVTHSFDDDNKWKIHYEAIS-DKDT 163 (347)
T ss_dssp CCCCBTTBEETTSTTCGGGSBCEEEEEECS-SEEEEEEEEEECTTGGGCCSCEEEEEEEEEETTSEEEEEEEEEE-SSCE
T ss_pred ccCCCCCcccCCCCcccccceEEEEEccCC-cceEEEEEEECCCccCCCCeEEEEEEEEEECCCCeEEEEEEEEc-CCCe
Confidence 999999999999999999999999876431 01179999999989999999999999999986689999999998 9999
Q ss_pred eEeccCCcccccCCCCCCCccCeEEEEeCceEEeeCCCC-CCCCceeccCCCCCCCCCCeeecccccCCCCCcceeEEec
Q 047922 168 PVNLAQHSYWNLGGHSSGDILSQEVQIFASSYTPVDDQL-IPTGKIETVEGTPYDFLQPHTIGSSIDKLPGGYDINYVLD 246 (478)
Q Consensus 168 p~nlg~HpyFnl~~~~~~~i~d~~L~i~a~~~~~~d~~~-iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~l~ 246 (478)
|||+|+||||||++...+++.+|+|+|+|++++++|+++ ||||++.+|++|+|||+.++.|++.+.....
T Consensus 164 p~nlg~HpYFnl~g~~~~~i~~~~L~i~a~~~~~~d~~~~iPtG~~~~v~gt~~df~~~~~l~~~~~~~~~--------- 234 (347)
T 1nsx_A 164 VFNPTGNVYFNLNGDASESVENHGLRLAASRFVPLKDQTEIVRGDIVDIKNTDLDFRQEKQLSNAFNSNME--------- 234 (347)
T ss_dssp ECBCEECCEECTTSSTTSCGGGSEEEECEEEECCBCSTTCCBCSCCEECTTSTTCCSSCEEHHHHHHCCCH---------
T ss_pred EEeeeccceEecCCCCCCceeceEEEEECCeEEEECCCCcCcCCCeEecCCCcccccCCcccchhhccchh---------
Confidence 999999999999986555799999999999999999999 9999999999999999999888776421100
Q ss_pred CCCCcccceeEEEEEcCCCCeEEEEEecCCceEEEcCCceeeeeeEEEEEeeccCCcceeecccceeecCCCCCCCeece
Q 047922 247 KDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILSQ 326 (478)
Q Consensus 247 ~~~~~~~~~~~~~l~~~~sg~~L~v~~~~p~~q~yt~~~~~~~l~v~~~a~~~~~~~p~~~~~H~yfnl~g~~~~~v~~~ 326 (478)
T Consensus 235 -------------------------------------------------------------------------------- 234 (347)
T 1nsx_A 235 -------------------------------------------------------------------------------- 234 (347)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEeccceeccCCCCCcccceeccCCCCcccCCceeccccccCCCcccceeEEeccCCCcccceeEEEEEcCCCCcEEE
Q 047922 327 EVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVME 406 (478)
Q Consensus 327 ~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~~~~~~~~~~~~~~a~l~~~~sg~~l~ 406 (478)
++. ...+|||||++.+. . ..+.+|+|.+ +|+.|+
T Consensus 235 ------------------------------------~~~-----~~~g~D~~f~l~~~-~--~~~~~a~l~~--sg~~l~ 268 (347)
T 1nsx_A 235 ------------------------------------QVQ-----LVKGIDHPFLLDQL-G--LDKEQARLTL--DDTSIS 268 (347)
T ss_dssp ------------------------------------HHH-----HHTSCEEEEEESSC-B--TTSCCEEEEE--TTEEEE
T ss_pred ------------------------------------hhc-----ccCCCCEEEEecCC-C--CceEEEEEEe--CCCEEE
Confidence 000 00156666666321 0 1124567776 899999
Q ss_pred EEecCCeeEEEeCCccccccC--CCCeeeecceEEEEccCCCCCCCCCCCCCCceecCCCEEEEEEEEEEEecC
Q 047922 407 LLADQPGVQYYTGGQIKEVRG--KGGFVYKKHAGLCLETQAFPDSVNHPNFPNTIVYPGEKYKHHMLYKFSTKS 478 (478)
Q Consensus 407 v~t~~p~~qvyT~~~~~~~~~--~~~~~~~~~~~i~~E~~~~pda~n~~~~~~~~l~pg~~~~~~~~y~f~~~~ 478 (478)
|+|++|++||||+++++. | |.|..|.+++|||||||++|||+|+++|++++|+|||+|.++++|+|++++
T Consensus 269 v~t~~p~lqvyt~~~~~~--g~~~~g~~~~~~~~vclEpq~~pDa~n~~~~~~~~L~pGe~~~~~~~~~f~~~~ 340 (347)
T 1nsx_A 269 VFTDQPSIVIFTANFGDL--GTLYHEKKQVHHGGITFECQVSPGSEQIPELGDISLKAGEKYQATTIYSLHTKL 340 (347)
T ss_dssp EEESSSEEEEECCCCTTC--CCEETTEECCTTCCEECEEESCTTTTTCGGGCCCEECTTCEEEEEEEEEEEECC
T ss_pred EEeCCCEEEEECCCCCcc--ccccCCcccCCcCEEEEeccCCCCccCCCCCCCeEECCCCEEEEEEEEEEEecc
Confidence 999999999999998765 4 567889999999999999999999999999999999999999999999763
No 3
>1lur_A Aldose 1-epimerase; vitamin B12, methyltransferase, structural genomics, structure-based function assignment, decarboxylase, PSI; 1.85A {Caenorhabditis elegans} SCOP: b.30.5.4
Probab=100.00 E-value=1.6e-68 Score=541.57 Aligned_cols=327 Identities=28% Similarity=0.551 Sum_probs=287.2
Q ss_pred cEEEEEEEEeCCEEEEEeccCceEEEEEeeCCCCceeeEEecCCChhhcccCCCcccceeecCCCccCCcEEEECCEEEE
Q 047922 8 EEVKFYELKKGDFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTLDGTHYK 87 (478)
Q Consensus 8 ~~~~~~~L~n~~~~v~v~~~Ga~i~~l~~~d~~G~~~dvv~g~~~~~~y~~~~~~~G~~lgp~anRI~~g~~~~~G~~y~ 87 (478)
..+..|+|.+++++|+|+++||+|++|+++|++|+.+|||||+++.+.|...+.++|++||||||||++|+|+++|++|+
T Consensus 11 ~~~~~~~L~~~~~~~~i~~~GA~l~sl~~~d~~G~~~dvvl~~~~~~~y~~~~~~~G~~lgp~anRI~~g~f~~~G~~y~ 90 (339)
T 1lur_A 11 ASGFIEIANKQGLTATLLPFGATLAKLTFPDKNGKNQDLVLGFDTIDEFEKDAASIGKTVGRVANRIKNSTLHFDGKQYT 90 (339)
T ss_dssp CCCCEEEECSSSCEEEEETBTTEEEEEEEECTTSCEEECBCCCSSHHHHHHCSSCTTCEECSBCSEEGGGEEEETTEEEE
T ss_pred ceeEEEEEeCCCEEEEEecCCcEEEEEEEECCCCCEeEEEEcCCChHHhccCCCccccEecCcCCeecCCEEEECCEEEE
Confidence 45678999667899999999999999999998888789999999999998888899999999999999999999999999
Q ss_pred eecCCCCCCCCCCCCCCCccceEEEEEecCCCCCEEEEEEEeCCCCCCCCceeEEEEEEEEeCCCeEEEEEEEEeCCCce
Q 047922 88 LVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHSTDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKARNKAT 167 (478)
Q Consensus 88 L~~N~~~n~lHG~~~g~~~~~w~v~~~~~~~~~~~v~l~~~~~~~~~gyP~~~~~~v~y~L~~~~~l~i~~~~~n~~~~~ 167 (478)
|++|+++|++|||++||+++.|+++..++ ++|+|++.++++++||||+++++|+|+|+++++|+|+|+|+. +++|
T Consensus 91 L~~N~~~n~lHGg~~g~~~~~W~v~~~~~----~~v~l~l~s~d~~~gyPg~~~~~vtY~L~~~~~L~i~~~a~~-d~~t 165 (339)
T 1lur_A 91 MTPNNGPHYLHGGPNGLGYRKWEVVRHAP----ESVSFSVRANEQDDGLPGDAKIDVTYTVNDRNQLIIEHHATC-DTPG 165 (339)
T ss_dssp CCCSBTTBEETTCTTSGGGSBCEEEEEET----TEEEEEEEEEHHHHSSSSEEEEEEEEEECTTSEEEEEEEEEC-SSCE
T ss_pred CCCCCCCcccCCCCcccccceeeEEEccC----CEEEEEEECCCcCCCCCeEEEEEEEEEECCCCeEEEEEEEeC-CCCe
Confidence 99999999999999999999999987643 689999999888899999999999999985689999999977 9999
Q ss_pred eEeccCCcccccCCCCCCCccCeEEEEeCceEEeeCCCCCCCCceeccCCCCCCCCCCeeecccccCCCCCcceeEEecC
Q 047922 168 PVNLAQHSYWNLGGHSSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPGGYDINYVLDK 247 (478)
Q Consensus 168 p~nlg~HpyFnl~~~~~~~i~d~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~l~~ 247 (478)
|||+|+||||||++. +++.+|+|+|+|++++++|+++||||++.+|++++|||+.++.|++.+.....
T Consensus 166 p~~lg~HpYFnl~~~--~~i~~~~L~i~a~~~~~~d~~~iPtg~~~~v~~t~~Df~~~~~l~~~~~~~~~---------- 233 (339)
T 1lur_A 166 LLALTNHAYWNLDGS--DTVAEHFLEMEADEFVEVDDTFCPTGAIRSVTDTGFDFRSGKQLKESGKDAEE---------- 233 (339)
T ss_dssp ECBCEECCEECSSCC--SCSTTCEEEECEEEEEEECTTSCEEEEEEECTTSTTCCTTCEETTCSCCCSSC----------
T ss_pred EEeeeccceEECCCC--CcccCEEEEEECCEEEEeCCCCccCCCEEccCCCcccccCceecCchhccccc----------
Confidence 999999999999975 37899999999999999999999999999999999999999888775421000
Q ss_pred CCCcccceeEEEEEcCCCCeEEEEEecCCceEEEcCCceeeeeeEEEEEeeccCCcceeecccceeecCCCCCCCeeceE
Q 047922 248 DDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILSQE 327 (478)
Q Consensus 248 ~~~~~~~~~~~~l~~~~sg~~L~v~~~~p~~q~yt~~~~~~~l~v~~~a~~~~~~~p~~~~~H~yfnl~g~~~~~v~~~~ 327 (478)
T Consensus 234 -------------------------------------------------------------------------------- 233 (339)
T 1lur_A 234 -------------------------------------------------------------------------------- 233 (339)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEeccceeccCCCCCcccceeccCCCCcccCCceeccccccCCCcccceeEEeccCCCcccce-eEEEEEcCCCCcEEE
Q 047922 328 VQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKMR-KVAIVHDKKSGRVME 406 (478)
Q Consensus 328 l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~~~~~~~~~~~~-~~a~l~~~~sg~~l~ 406 (478)
..+|||||++.+..+ ..++ .+|+|.++.+|+.|+
T Consensus 234 --------------------------------------------~~~~D~~f~~~~~~~-~~~~~~~a~l~~~~sg~~l~ 268 (339)
T 1lur_A 234 --------------------------------------------LLDLDNDLVITKKTP-PSTPSTYLRFWSEKSGIELS 268 (339)
T ss_dssp --------------------------------------------CCCCEEEEEECCCCC-----CCCEEEECTTTCEEEE
T ss_pred --------------------------------------------CCCCccEEEeCCCCC-CcccceEEEEEECCCCcEEE
Confidence 015666666642111 0012 457899999999999
Q ss_pred EEecCCeeEEEeCCccccccCCCCeeeecceEEEEccCCCCCCCCCCCCCCceecCCCEEEEEEEEEEEec
Q 047922 407 LLADQPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQAFPDSVNHPNFPNTIVYPGEKYKHHMLYKFSTK 477 (478)
Q Consensus 407 v~t~~p~~qvyT~~~~~~~~~~~~~~~~~~~~i~~E~~~~pda~n~~~~~~~~l~pg~~~~~~~~y~f~~~ 477 (478)
|+|++|++||||++++ ...|+.|..|.++++||||||++|||+|+++|++++|+|||+|..+++|+|+++
T Consensus 269 v~t~~p~~~vyt~~~~-~~~g~~g~~y~~~~~vclEp~~~pDa~n~~~~~~~~L~pGe~~~~~~~~~f~~~ 338 (339)
T 1lur_A 269 ITTSYPVIHLYASKFL-DCKGKKGEHYKANKALAIEPQFHSAAPNFDHFPDVSLRPGDHYCQEIVYTFSHV 338 (339)
T ss_dssp EEESSSEEEEECCTTC-CEECGGGCEECTTCCEEEEEESCTTGGGCTTSCCCEECTTCCEEEEEEEEEEEC
T ss_pred EEeCCCEEEEECCCCc-cccCCCCcccCCCCEEEEeccCCCCccCCCCCCCeEECCCCEEEEEEEEEEEEe
Confidence 9999999999999987 545666788999999999999999999999999999999999999999999864
No 4
>1snz_A Aldose 1-epimerase; mutarotase, galactosemia, isomerase; 2.20A {Homo sapiens} SCOP: b.30.5.4 PDB: 1so0_A*
Probab=100.00 E-value=7.1e-68 Score=538.23 Aligned_cols=326 Identities=44% Similarity=0.829 Sum_probs=291.6
Q ss_pred CC-cEEEEEEEEeCCEEEEEeccCceEEEEEeeCCCCceeeEEecCCChhhcccCCCcccceeecCCCccCCcEEEECCE
Q 047922 6 NS-EEVKFYELKKGDFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTLDGT 84 (478)
Q Consensus 6 ~~-~~~~~~~L~n~~~~v~v~~~Ga~i~~l~~~d~~G~~~dvv~g~~~~~~y~~~~~~~G~~lgp~anRI~~g~~~~~G~ 84 (478)
+| +.+..|+|+|++++|+|+++||+|+||++++++|+.+|||||+++.+.|..++.++|++||||||||++|+|+++|+
T Consensus 16 ~g~~~~~~~~L~n~~~~~~i~~~GA~l~s~~~~~~~G~~~~vv~g~~~~~~y~~~~~~~G~~l~p~~nRi~~g~f~~~G~ 95 (344)
T 1snz_A 16 SGGGTVEKFQLQSDLLRVDIISWGCTITALEVKDRQGRASDVVLGFAELEGYLQKQPYFGAVIGRVANRIAKGTFKVDGK 95 (344)
T ss_dssp TTTEEEEEEEEECSSCEEEEETBTTEEEEEEEECTTSCEEECBCCCSSHHHHHSSCSCTTCEECSBCSEEGGGEEEETTE
T ss_pred CCCcEEEEEEEEcCCEEEEEecCCcEEEEEEecCCCCCEeeEEECCCChHHHhhCCCceeeEecCcCCcccCCEEEECCE
Confidence 56 88999999999999999999999999999988887789999999999999888899999999999999999999999
Q ss_pred EEEeecCCCCCCCCCCCCCCCccceEEEEEecCCCCCEEEEEEEeCCCCCCCCceeEEEEEEEEeCCCeEEEEEEEEeCC
Q 047922 85 HYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHSTDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKARN 164 (478)
Q Consensus 85 ~y~L~~N~~~n~lHG~~~g~~~~~w~v~~~~~~~~~~~v~l~~~~~~~~~gyP~~~~~~v~y~L~~~~~l~i~~~~~n~~ 164 (478)
+|+|++|+++|++|||++||+++.|+++..+ ++|+|++.++++++||||+++++|+|+|++ ++|+|+|+++| +
T Consensus 96 ~y~L~~N~~~~~lHG~~~g~~~~~W~v~~~~-----~~v~l~l~~~~~~~gyP~~~~~~vty~L~~-~~L~i~~~a~~-d 168 (344)
T 1snz_A 96 EYHLAINKEPNSLHGGVRGFDKVLWTPRVLS-----NGVQFSRISPDGEEGYPGELKVWVTYTLDG-GELIVNYRAQA-S 168 (344)
T ss_dssp EEECCCTBTTBEETTSSSCGGGSBCEEEEET-----TEEEEEEEECTTGGGCCSCEEEEEEEEEET-TEEEEEEEEEE-S
T ss_pred EEECCCCCCCcccCCCccccccceeeEEEeC-----CEEEEEEECCCcCCCCCEEEEEEEEEEEcC-CEEEEEEEEEe-C
Confidence 9999999999999999999999999998753 479999999888999999999999999985 59999999999 9
Q ss_pred CceeEeccCCcccccCCCCCCCccCeEEEEeCceEEeeCCCCCCCCceeccCCCCCCCCCCeeecccccCC-CCCcceeE
Q 047922 165 KATPVNLAQHSYWNLGGHSSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKL-PGGYDINY 243 (478)
Q Consensus 165 ~~~p~nlg~HpyFnl~~~~~~~i~d~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~-~~g~D~~f 243 (478)
++||||+|+||||||+++..+++.+|+|+|++++++++|+++||||++.+|++++|||+.++.|++.+... ..
T Consensus 169 ~~~p~~~~~H~YFnl~~~~~~~i~~~~L~i~a~~~~~~d~~~iPtg~~~~v~~t~~df~~~~~l~~~~~~~~~~------ 242 (344)
T 1snz_A 169 QATPVNLTNHSYFNLAGQASPNINDHEVTIEADTYLPVDETLIPTGEVAPVQGTAFDLRKPVELGKHLQDFHLN------ 242 (344)
T ss_dssp SCEECBCEECCCBCTTCTTCSCCTTCEEEECEEEECCBCTTSCBCSCCEECTTSTTCCSSCEEHHHHHHHTTCC------
T ss_pred CceEEeccccceEecCCCCCCcccCEEEEEECCeEEEeCCCCcccCceecCCCCcccccCCcCcChhhcccccC------
Confidence 99999999999999998655679999999999999999999999999999999999999998887654110 01
Q ss_pred EecCCCCcccceeEEEEEcCCCCeEEEEEecCCceEEEcCCceeeeeeEEEEEeeccCCcceeecccceeecCCCCCCCe
Q 047922 244 VLDKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDI 323 (478)
Q Consensus 244 ~l~~~~~~~~~~~~~~l~~~~sg~~L~v~~~~p~~q~yt~~~~~~~l~v~~~a~~~~~~~p~~~~~H~yfnl~g~~~~~v 323 (478)
T Consensus 243 -------------------------------------------------------------------------------- 242 (344)
T 1snz_A 243 -------------------------------------------------------------------------------- 242 (344)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eceEEEEeccceeccCCCCCcccceeccCCCCcccCCceeccccccCCCcccceeEEeccCCCcccceeEEEEEcCCCCc
Q 047922 324 LSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGR 403 (478)
Q Consensus 324 ~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~~~~~~~~~~~~~~a~l~~~~sg~ 403 (478)
||||||++.... .....|+|.++.+|+
T Consensus 243 --------------------------------------------------g~D~~f~~~~~~---~~~~~a~l~~~~sg~ 269 (344)
T 1snz_A 243 --------------------------------------------------GFDHNFCLKGSK---EKHFCARVHHAASGR 269 (344)
T ss_dssp --------------------------------------------------CCEEEEEECCCS---SCEEEEEEEETTTTE
T ss_pred --------------------------------------------------CCCeEEEccCCC---CCceEEEEEeCCCCc
Confidence 456666553211 124568899999999
Q ss_pred EEEEEecCCeeEEEeCCccccc-cCCCCeeeecceEEEEccCCCCCCCCCCCCCCceecCCCEEEEEEEEEEEec
Q 047922 404 VMELLADQPGVQYYTGGQIKEV-RGKGGFVYKKHAGLCLETQAFPDSVNHPNFPNTIVYPGEKYKHHMLYKFSTK 477 (478)
Q Consensus 404 ~l~v~t~~p~~qvyT~~~~~~~-~~~~~~~~~~~~~i~~E~~~~pda~n~~~~~~~~l~pg~~~~~~~~y~f~~~ 477 (478)
.|+|+|++|++||||+++++.. .++.+..|.++.+||||||.+|||+|+++|+.++|+|||+|+.+++|+|+++
T Consensus 270 ~l~v~t~~p~~~vyt~~~~~~~~~~~~~~~y~~~~~vclEp~~~pda~n~~~~~~~~L~pGe~~~~~~~~~f~~~ 344 (344)
T 1snz_A 270 VLEVYTTQPGVQFYTGNFLDGTLKGKNGAVYPKHSGFCLETQNWPDAVNQPRFPPVLLRPGEEYDHTTWFKFSVA 344 (344)
T ss_dssp EEEEEESSSEEEEECCTTCEEEEECGGGCEEETTSCBEEEEESCTTGGGCTTSCCCEECTTSCEEEEEEEEEEEC
T ss_pred EEEEEeCCCeEEEECCCCCCccccCCCCcccCCCCEEEEeCcCCCCcccCCCCCCeEECCCCEEEEEEEEEEEeC
Confidence 9999999999999999988652 4566778989999999999999999999999999999999999999999863
No 5
>1yga_A Hypothetical 37.9 kDa protein in BIO3-HXT17 intergenic region; aldose_1_epimerase, sugar metabolism, predicted, structural genomics; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-61 Score=491.55 Aligned_cols=325 Identities=27% Similarity=0.447 Sum_probs=277.6
Q ss_pred CcEEEEEEEEeC-CEEEEEeccCceEEEEEeeCCCCceeeEEecCCChhhcccCCCcccceeecCCCccCCcEEEECCEE
Q 047922 7 SEEVKFYELKKG-DFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTLDGTH 85 (478)
Q Consensus 7 ~~~~~~~~L~n~-~~~v~v~~~Ga~i~~l~~~d~~G~~~dvv~g~~~~~~y~~~~~~~G~~lgp~anRI~~g~~~~~G~~ 85 (478)
++.+..|+|+|+ +++|+|+++||+|+||+++ | +|+|||+++.+.|..++.++|++|+||||||++|+|+++|++
T Consensus 7 ~~~~~~~~l~n~~~~~~~i~~~GA~l~s~~~~---g--~~vl~~~~~~~~y~~~~~~~G~~l~p~~nRi~~g~f~~~G~~ 81 (342)
T 1yga_A 7 DNKYGVITIGDEKKFQATIAPLGATLVDLKVN---G--QSVVQGYSNVQDYLTDGNMMGATVGRYANRIAKGVFSLDDGP 81 (342)
T ss_dssp CCTTCCEEEEETTTEEEEEETBTTEEEEEEET---T--EECBCCCSSGGGGTTCSSCTTCEECSBCSEEGGGEEEETTEE
T ss_pred CceEEEEEEECCCCEEEEEECCCCEEEEEEEC---C--eeEEecCCChHHhccCCCeEccEECCCCCceeCCEEEECCEE
Confidence 556788999996 7999999999999999983 5 799999999999988888999999999999999999999999
Q ss_pred EEeecCCCCCCCCCCCCCCCccceEEEEEecC-CCCCEEEEEEEeCCCCCC---CCceeEEEEEEEEeC-CCeEEEEEEE
Q 047922 86 YKLVANEKSNMLHGGPKGFSDVIWKVKTYENE-GPTPKIVFSYHSTDGEEG---FPGDLDVTVSYSLTS-EKELSVKMKA 160 (478)
Q Consensus 86 y~L~~N~~~n~lHG~~~g~~~~~w~v~~~~~~-~~~~~v~l~~~~~~~~~g---yP~~~~~~v~y~L~~-~~~l~i~~~~ 160 (478)
|+|++|+++|++|||++||+++.|+++....+ ...++|+|++.++++++| |||+++++|+|+|++ +++|+|+|++
T Consensus 82 y~l~~n~~~~~lHG~~~g~~~~~W~v~~~~~~~~~~~~v~l~l~~~~~~~g~~~yP~~~~~~vty~L~~~~~~L~i~~~~ 161 (342)
T 1yga_A 82 HKLTVNNCGNTNHSSISSLNLKQYKASPVENPSKGVYVVEFKLLDDHTQPNPNEFPGDLEVTVKYTLNVAEMTLDMEYQA 161 (342)
T ss_dssp EECCCCBTTBEETTGGGCGGGSBCEECCCEEEETTEEEEEEEEEECSSSSSCCCSSSEEEEEEEEEEETTTTEEEEEEEE
T ss_pred EEcCCCCCCcccCCCccccCcceeeeEEeeccCCCCCEEEEEEECCcccCCCcCCCeEEEEEEEEEEeCCCCEEEEEEEE
Confidence 99999999999999999999999999754210 013579999999888888 999999999999983 4899999999
Q ss_pred EeC-CCceeEeccCCcccccCCCC-CCCccCeEEEEeCceEEeeCCCC-CCCCceeccCCCCCCCCCCeeecccccCCCC
Q 047922 161 KAR-NKATPVNLAQHSYWNLGGHS-SGDILSQEVQIFASSYTPVDDQL-IPTGKIETVEGTPYDFLQPHTIGSSIDKLPG 237 (478)
Q Consensus 161 ~n~-~~~~p~nlg~HpyFnl~~~~-~~~i~d~~L~i~a~~~~~~d~~~-iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~ 237 (478)
+|. +++||||+|+||||||++.. .+++.+|+|+|++++++++|+.. ||||++.+|++++|||+.++.|++.+ .
T Consensus 162 ~N~~d~~~p~~~~~H~YFnl~~~~~~~~i~~~~l~l~a~~~~~~d~~~~iPtg~~~~v~~~~~df~~~~~l~~~~----~ 237 (342)
T 1yga_A 162 QLVRGDATPINMTNHSYFNLNKVKSEKSIRGTEVKVCSNKSLEVTEGALLPTGKIIERNIATFDSTKPTVLHEDT----P 237 (342)
T ss_dssp EEEESSEEECBCEECCCBCTTTTTCTTCCTTEEEEESCCEEEEECTTTCCEEEEEEECSCCBTTCSSCEEECSSC----C
T ss_pred EeCCCCceEEeeeccceEEcCCCCCCCcccceEEEEeCCeEEEECCCCCCcCCCeEecCCCcccccCCeecCccc----C
Confidence 987 99999999999999998743 34799999999999999999888 99999999999999999999998764 1
Q ss_pred CcceeEEecCCCCcccceeEEEEEcCCCCeEEEEEecCCceEEEcCCceeeeeeEEEEEeeccCCcceeecccceeecCC
Q 047922 238 GYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLAQHSYWNLGG 317 (478)
Q Consensus 238 g~D~~f~l~~~~~~~~~~~~~~l~~~~sg~~L~v~~~~p~~q~yt~~~~~~~l~v~~~a~~~~~~~p~~~~~H~yfnl~g 317 (478)
+|||||++.....
T Consensus 238 ~~D~~f~~~~~~~------------------------------------------------------------------- 250 (342)
T 1yga_A 238 VFDCTFIIDANKD------------------------------------------------------------------- 250 (342)
T ss_dssp CCEEEEECTTTTT-------------------------------------------------------------------
T ss_pred CCCcEEEeCCCcc-------------------------------------------------------------------
Confidence 5899998763100
Q ss_pred CCCCCeeceEEEEeccceeccCCCCCc-ccceeccCCCCcccCCceeccccccCCCcccceeEEeccCCCcccceeEEEE
Q 047922 318 HNSGDILSQEVQIFASSYTPVDDQLIP-TGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKMRKVAIV 396 (478)
Q Consensus 318 ~~~~~v~~~~l~~~a~~~~~~d~~~iP-tG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~~~~~~~~~~~~~~a~l 396 (478)
..+ .|+ .....+..|+|
T Consensus 251 ------------------------~~~~~g~--------------------------------------~~~~~~~~~~l 268 (342)
T 1yga_A 251 ------------------------LKTTDSV--------------------------------------SVNKLVPVFKA 268 (342)
T ss_dssp ------------------------CCSSBCT--------------------------------------TTSCCEEEEEE
T ss_pred ------------------------ccccccc--------------------------------------cccccceEEEE
Confidence 000 000 00012356889
Q ss_pred EcCCCCcEEEEEecCCeeEEEeCCccccccCCCCeeeecceEEEEccCCCCCCCCCCCCCC-ceecCCCEEEEEEEEEEE
Q 047922 397 HDKKSGRVMELLADQPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQAFPDSVNHPNFPN-TIVYPGEKYKHHMLYKFS 475 (478)
Q Consensus 397 ~~~~sg~~l~v~t~~p~~qvyT~~~~~~~~~~~~~~~~~~~~i~~E~~~~pda~n~~~~~~-~~l~pg~~~~~~~~y~f~ 475 (478)
.++.+|+.|+|++++|++||||++++. ..|.++.+||||||.+|||+|+++|+. ++|+|||+|+.+++|+|+
T Consensus 269 ~~~~~g~~l~v~~~~p~~~vyt~~~~~-------~~y~~~~~vclEp~~~pda~n~~~~~~~~~L~pGe~~~~~~~~~f~ 341 (342)
T 1yga_A 269 YHPESHIKFEVSTTEPTVHLYTGDNLC-------GKFVPRSGFAVQQGRYVDAINRDEWRGCVLLKRGEVYTSKTQYKFD 341 (342)
T ss_dssp ECTTTCCEEEEEESSSEEEEECCTTCC-------TTSCTTSCBEEEEESCSSGGGCHHHHGGGEEETTCCEEEEEEEEEE
T ss_pred EeCCCCeEEEEEeCCCEEEEECCCCcc-------ccCCCCCEEEEECCCCCCcccCCCCCCCeEECCCCEEEEEEEEEEE
Confidence 999999999999999999999998652 245568999999999999999998876 799999999999999997
Q ss_pred e
Q 047922 476 T 476 (478)
Q Consensus 476 ~ 476 (478)
+
T Consensus 342 ~ 342 (342)
T 1yga_A 342 I 342 (342)
T ss_dssp C
T ss_pred C
Confidence 4
No 6
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=100.00 E-value=6.3e-61 Score=530.36 Aligned_cols=324 Identities=29% Similarity=0.534 Sum_probs=280.0
Q ss_pred CCcEEEEEEEEeC-CEEEEEeccCceEEEEEeeCCCCceeeEEecCCChhhccc-CCCcccceeecCCCccCCcEEEECC
Q 047922 6 NSEEVKFYELKKG-DFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKN-DTTYFGSVVGRVANRIGGAQFTLDG 83 (478)
Q Consensus 6 ~~~~~~~~~L~n~-~~~v~v~~~Ga~i~~l~~~d~~G~~~dvv~g~~~~~~y~~-~~~~~G~~lgp~anRI~~g~~~~~G 83 (478)
.++.+..|+|+|+ +++|+|+++||+|++|+++ | +||||||++.+.|.. ++.|+|++||||||||++|+|+++|
T Consensus 369 ~~~~~~~~~l~n~~~~~~~i~~~Ga~l~s~~~~---g--~~~v~~~~~~~~y~~~~~~~~g~~l~~~~nRi~~g~f~~~G 443 (699)
T 1z45_A 369 MRYDARFVTIGAGTRFQATFANLGASIVDLKVN---G--QSVVLGYENEEGYLNPDSAYIGATIGRYANRISKGKFSLCN 443 (699)
T ss_dssp TCTTSEEEEESTTSSEEEEEESBTTCEEEEEET---T--EECBCCCSSHHHHTCTTCCCTTCEECSBCSEEGGGEEEETT
T ss_pred CCcceEEEEEECCCceEEEEEccCeEEEEEeec---C--ceEEECCCCHHHHhhcCCCccccccCcccCeecCcEEEECC
Confidence 4677889999998 8999999999999999983 6 599999999999986 5678999999999999999999999
Q ss_pred EEEEeecCCCCCCCCCCCCCCCccceEEEEEecCCCCC--EEEEEEEeCCCCCCCCceeEEEEEEEEe-CCCeEEEEEEE
Q 047922 84 THYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTP--KIVFSYHSTDGEEGFPGDLDVTVSYSLT-SEKELSVKMKA 160 (478)
Q Consensus 84 ~~y~L~~N~~~n~lHG~~~g~~~~~w~v~~~~~~~~~~--~v~l~~~~~~~~~gyP~~~~~~v~y~L~-~~~~l~i~~~~ 160 (478)
++|+|++|+++|+||||++||+++.|+++..+.. +.. +|+|++.++++++||||+++++|+|+|+ ++++|.|+|++
T Consensus 444 ~~y~l~~n~~~~~lHG~~~g~~~~~w~~~~~~~~-~~~~~~~~~~~~~~~~~~gyP~~~~~~v~y~L~~~~~~L~i~~~~ 522 (699)
T 1z45_A 444 KDYQLTVNNGVNANHSSIGSFHRKRFLGPIIQNP-SKDVFTAEYMLIDNEKDTEFPGDLLVTIQYTVNVAQKSLEIVYKG 522 (699)
T ss_dssp EEEECCCCBTTBEETTGGGCGGGSBCEEEEEEEE-ETTEEEEEEEEEECGGGSSSSSEEEEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEccCCCCCcccCCCccccceeecceeeeccC-CCCcceEEEEEECCCcCCCCCceEEEEEEEEEecCCCEEEEEEEE
Confidence 9999999999999999999999999998532211 014 7999999988899999999999999998 56899999999
Q ss_pred EeC-CCceeEeccCCcccccCCCCCCCccCeEEEEeCceEEeeCCCCCCCCceeccCCCCCCCCCCeeecccccCCCCCc
Q 047922 161 KAR-NKATPVNLAQHSYWNLGGHSSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPGGY 239 (478)
Q Consensus 161 ~n~-~~~~p~nlg~HpyFnl~~~~~~~i~d~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~ 239 (478)
+|. +++||||+|+||||||+++..+++.+|.|+|++++++++|+++||||++.+|++|+|||+.++.|+... .+|
T Consensus 523 ~n~~~~~~p~~~~~H~yFnl~~~~~~~~~~~~l~~~a~~~~~~d~~~iptg~~~~v~~t~~df~~~~~l~~~~----~~~ 598 (699)
T 1z45_A 523 KLTAGEATPINLTNHSYFNLNKPYGDTIEGTEIMVRSKKSVDVDKNMIPTGNIVDREIATFNSTKPTVLGPKN----PQF 598 (699)
T ss_dssp EEEESSEEECBCEECCEECTTTTSCSSSTTEEEEESCCEEEEECTTSCEEEEEEECSCCBTTSSSCEEECSSC----CCC
T ss_pred EecCCCCceecccccceEeecCCCCCCccccEEEEecCeEEecCCCCCCCCCcccCcCCCcccCCcccccccC----CCC
Confidence 998 899999999999999997555679999999999999999999999999999999999999999887753 478
Q ss_pred ceeEEecCCCCcccceeEEEEEcCCCCeEEEEEecCCceEEEcCCceeeeeeEEEEEeeccCCcceeecccceeecCCCC
Q 047922 240 DINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLAQHSYWNLGGHN 319 (478)
Q Consensus 240 D~~f~l~~~~~~~~~~~~~~l~~~~sg~~L~v~~~~p~~q~yt~~~~~~~l~v~~~a~~~~~~~p~~~~~H~yfnl~g~~ 319 (478)
||||+++...
T Consensus 599 D~~~~~~~~~---------------------------------------------------------------------- 608 (699)
T 1z45_A 599 DCCFVVDENA---------------------------------------------------------------------- 608 (699)
T ss_dssp EEEEESCSSC----------------------------------------------------------------------
T ss_pred CcceEccCcc----------------------------------------------------------------------
Confidence 9999875310
Q ss_pred CCCeeceEEEEeccceeccCCCCCcccceeccCCCCcccCCceeccccccCCCcccceeEEeccCCCcccceeEEEEEcC
Q 047922 320 SGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHDK 399 (478)
Q Consensus 320 ~~~v~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~~~~~~~~~~~~~~a~l~~~ 399 (478)
++|.++... .....+|+|.++
T Consensus 609 ---------------------------------------------------------~~~~~~~~~--~~~~~~~~l~~~ 629 (699)
T 1z45_A 609 ---------------------------------------------------------KPSQINTLN--NELTLIVKAFHP 629 (699)
T ss_dssp ---------------------------------------------------------CCCCSBCTT--SCCEEEEEEEET
T ss_pred ---------------------------------------------------------ccccccccc--cccceeEEEEcC
Confidence 000000000 012356889999
Q ss_pred CCCcEEEEEecCCeeEEEeCCccccccCCCCeeeecceEEEEccCCCCCCCCCCCCC-CceecCCCEEEEEEEEEEE
Q 047922 400 KSGRVMELLADQPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQAFPDSVNHPNFP-NTIVYPGEKYKHHMLYKFS 475 (478)
Q Consensus 400 ~sg~~l~v~t~~p~~qvyT~~~~~~~~~~~~~~~~~~~~i~~E~~~~pda~n~~~~~-~~~l~pg~~~~~~~~y~f~ 475 (478)
.+|+.|+|+|++|++||||+++++. | |.++.|||||||.+|||+|+++|+ .++|+|||+|+++++|+|+
T Consensus 630 ~~g~~l~v~~~~p~~~~yt~~~~~~-----~--~~~~~~~clEp~~~pda~n~~~~~~~~~L~pge~~~~~~~~~f~ 699 (699)
T 1z45_A 630 DSNITLEVLSTEPTYQFYTGDFLSA-----G--YEARQGFAIEPGRYIDAINQENWKDCVTLKNGETYGSKIVYRFS 699 (699)
T ss_dssp TTTEEEEEEESSSEEEEECCTTCCT-----T--CCTTSCEEEEEESCSSGGGCTTTGGGGEEETTCEEEEEEEEEEC
T ss_pred CCCCEEEEEECCCEEEEEeCCCCCC-----C--CCCCCEEEEecCCCCCccCcccCCCCcEECCCCEEEEEEEEEEC
Confidence 9999999999999999999987642 2 778999999999999999999995 6899999999999999995
No 7
>3nre_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.59A {Escherichia coli}
Probab=100.00 E-value=5.9e-56 Score=440.20 Aligned_cols=281 Identities=19% Similarity=0.259 Sum_probs=237.9
Q ss_pred EEEEEEEeCCEEEEEecc-CceEEEEEeeCCCCceeeEEecCCChhhcccCCCcccceeecCCCccCCcEEEECCEEEEe
Q 047922 10 VKFYELKKGDFSVKFTNW-GATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTLDGTHYKL 88 (478)
Q Consensus 10 ~~~~~L~n~~~~v~v~~~-Ga~i~~l~~~d~~G~~~dvv~g~~~~~~y~~~~~~~G~~lgp~anRI~~g~~~~~G~~y~L 88 (478)
++.|+|+|+.++|+|.++ ||+|++| . +| +|||++++. + .....+.|++||||||||++|+|+++|++|+|
T Consensus 2 ~~~~~l~n~~~~~~i~~~~Ga~l~s~--~--~g--~~vl~~~~~--~-~~~~~~~g~~l~p~~nRi~~g~~~~~G~~y~l 72 (291)
T 3nre_A 2 MTIYTLSHGSLKLDVSDQGGVIEGFW--R--DT--TPLLRPGKK--S-GVATDASCFPLVPFANRVSGNRFVWQGREYQL 72 (291)
T ss_dssp CCEEEEEETTEEEEEETBTTEEEEEE--E--TT--EESSCCCCC--S-SCGGGSSEEEEBSCCSBCGGGEEEETTEEEEC
T ss_pred ccEEEEcCCCEEEEEEcccCceEEEE--e--CC--CEEEECCCc--c-cCccccCCcEEEeeCCEecCCEEEECCEEEEC
Confidence 457999999999999995 9999999 3 47 799999872 2 22234668999999999999999999999999
Q ss_pred ecCCC--CCCCCCCCCCCCccceEEEEEecCCCCCEEEEEEEeCCCCCCCCceeEEEEEEEEeCCCeEEEEEEEEeC-CC
Q 047922 89 VANEK--SNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHSTDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKAR-NK 165 (478)
Q Consensus 89 ~~N~~--~n~lHG~~~g~~~~~w~v~~~~~~~~~~~v~l~~~~~~~~~gyP~~~~~~v~y~L~~~~~l~i~~~~~n~-~~ 165 (478)
++|++ +|++||| +| ++.|++...++ ++|+|++.++ + |||+++++++|+|+ +++|.|+|+++|. ++
T Consensus 73 ~~N~~~~~~~~HG~--~~-~~~W~~~~~~~----~~v~l~l~~~---~-~P~~~~~~v~y~L~-~~~L~i~~~~~N~~~~ 140 (291)
T 3nre_A 73 QPNVEWDAHYLHGD--GW-LGEWQCVSHSD----DSLCLVYEHR---S-GVYHYRVSQAFHLT-ADTLTVTLSVTNQGAE 140 (291)
T ss_dssp CCCSTTCSSCBSBS--GG-GSBCEEEEECS----SEEEEEEEEE---S-SSCEEEEEEEEEEC-SSEEEEEEEEEECSSS
T ss_pred CCCCCCCCCCCCCc--hh-cceeEEEEccC----CEEEEEEeCC---C-CCceEEEEEEEEEe-CCeEEEEEEEEECCCC
Confidence 99997 8999999 45 89999987643 6899999874 5 99999999999998 5899999999998 99
Q ss_pred ceeEeccCCcccccCCCCCCCccCeEEEEeCceEEeeCCCCCCCCceeccCCCCCCCCCCeeecccccCCCCCcceeEEe
Q 047922 166 ATPVNLAQHSYWNLGGHSSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPGGYDINYVL 245 (478)
Q Consensus 166 ~~p~nlg~HpyFnl~~~~~~~i~d~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~l 245 (478)
+|||++|+||||||++ +|+|+|++++++++|+++||||++. +.+++|||+.++.|++. +|||||+
T Consensus 141 ~~~~~~~~H~YFnl~~-------~~~l~i~a~~~~~~d~~~iPtg~~~-v~~t~~df~~~~~l~~~------~~D~~f~- 205 (291)
T 3nre_A 141 TLPFGTGWHPYFPLSP-------QTRIQAQASGYWLEREQWLAGEFCE-QLPQELDFNQPAPLPRQ------WVNNGFA- 205 (291)
T ss_dssp CEEECCEEEEEEECCT-------TCEEEECCSEEEEECGGGCEEEEES-SCCGGGCCSSCEECCSS------CEEEEEE-
T ss_pred CccceEEcCccEecCC-------CeEEEEECCEEEEcCCCcCCCcccc-CCCCcccccCCcCCCCc------cccceee-
Confidence 9999999999999976 6899999999999998899999873 67777777777766542 3455554
Q ss_pred cCCCCcccceeEEEEEcCCCCeEEEEEecCCceEEEcCCceeeeeeEEEEEeeccCCcceeecccceeecCCCCCCCeec
Q 047922 246 DKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILS 325 (478)
Q Consensus 246 ~~~~~~~~~~~~~~l~~~~sg~~L~v~~~~p~~q~yt~~~~~~~l~v~~~a~~~~~~~p~~~~~H~yfnl~g~~~~~v~~ 325 (478)
T Consensus 206 -------------------------------------------------------------------------------- 205 (291)
T 3nre_A 206 -------------------------------------------------------------------------------- 205 (291)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEEeccceeccCCCCCcccceeccCCCCcccCCceeccccccCCCcccceeEEeccCCCcccceeEEEEEcCCCCcEE
Q 047922 326 QEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVM 405 (478)
Q Consensus 326 ~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~~~~~~~~~~~~~~a~l~~~~sg~~l 405 (478)
+.. ..|+|.++.+|++|
T Consensus 206 -------------------------------------------------------~~~--------~~a~l~~~~~g~~l 222 (291)
T 3nre_A 206 -------------------------------------------------------GWN--------GQARIEQPQEGYAI 222 (291)
T ss_dssp -------------------------------------------------------SCC--------SEEEEEEGGGTEEE
T ss_pred -------------------------------------------------------cCC--------ccEEEEECCCCeEE
Confidence 310 24678889999999
Q ss_pred EEEecCCe--eEEEeCCccccccCCCCeeeecceEEEEccCC-CCCCCCCCCCC-CceecCCCEEEEEEEEEEEe
Q 047922 406 ELLADQPG--VQYYTGGQIKEVRGKGGFVYKKHAGLCLETQA-FPDSVNHPNFP-NTIVYPGEKYKHHMLYKFST 476 (478)
Q Consensus 406 ~v~t~~p~--~qvyT~~~~~~~~~~~~~~~~~~~~i~~E~~~-~pda~n~~~~~-~~~l~pg~~~~~~~~y~f~~ 476 (478)
+|+|++|+ +||||++. +.+..|. |++||||||+ +|||+|+++|+ .++|+|||+|+.+++|+|+.
T Consensus 223 ~v~t~~p~~~~~vyt~~~------~~~~~~~-~~~vclEp~~~~pda~n~~~~~~~~~L~PGe~~~~~~~~~~~~ 290 (291)
T 3nre_A 223 IMETTPPAPCYFIFVSDP------AFDKGYA-FDFFCLEPMSHAPDDHHRPEGGDLIALAPGESTTSEMSLRVEW 290 (291)
T ss_dssp EEEEESCCSEEEEEECCT------TTCTTCC-SCEEEEEEESSCTTGGGSGGGTTCEEECTTCEEEEEEEEEEEE
T ss_pred EEEeCCCCceEEEEcCCC------CCCCCcc-CCEEEEcCccCCCCCCcCCCCCCCEEECCCCEEEEEEEEEEEe
Confidence 99999998 99999984 1133454 7999999997 99999999997 68999999999999999974
No 8
>3os7_A Galactose mutarotase-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: PG4 TLA; 1.80A {Clostridium acetobutylicum}
Probab=100.00 E-value=3.6e-54 Score=436.83 Aligned_cols=307 Identities=19% Similarity=0.246 Sum_probs=259.1
Q ss_pred EEEEEEEEeCCEEEEEe-ccCceEEEEEeeCCCCceeeEEecCCC---hhhcccCCCcccceeecCCCccCCcEEEECCE
Q 047922 9 EVKFYELKKGDFSVKFT-NWGATIVSVFLPDKDGKVDDVVLGYDS---VDDYKNDTTYFGSVVGRVANRIGGAQFTLDGT 84 (478)
Q Consensus 9 ~~~~~~L~n~~~~v~v~-~~Ga~i~~l~~~d~~G~~~dvv~g~~~---~~~y~~~~~~~G~~lgp~anRI~~g~~~~~G~ 84 (478)
.+..|+|+|+.++|+|+ ++||+|+||++++ +| +++||++++ .+.|...+.++|++|+|+||||++|+|+++|+
T Consensus 17 g~~~~~L~n~~~~~~i~p~~Ga~l~s~~~~~-~g--~~~l~~~~~~~~~~~y~~~~~~~G~pv~~p~nRi~~g~f~~~G~ 93 (341)
T 3os7_A 17 EHKCIRFAAGGYEALIIPDVGGNVVELKDTN-KG--VTILRTPKKDLKFEDFKNRPQVYGLPVLFPPNRIDDGTFKLGDK 93 (341)
T ss_dssp TEEEEEEEETTEEEEEETTTTTEEEEEEETT-TT--EECBCCCCTTCCHHHHHHSGGGSSCCEESSCSEEETTEEEETTE
T ss_pred CEEEEEEeCCCEEEEEchhcCCEEEEEEeCC-CC--CeEEEcCCcccchhhhhhCCcccceeEeCCCCcccCCEEEECCE
Confidence 47789999999999998 8999999999864 35 799999987 67888778899999999999999999999999
Q ss_pred EEEeecCC--CCCCCCCCCCCCCccceEEEEEecCCCCCEEEEEEEeCCCCC---CCCceeEEEEEEEEeCCCeEEEEEE
Q 047922 85 HYKLVANE--KSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHSTDGEE---GFPGDLDVTVSYSLTSEKELSVKMK 159 (478)
Q Consensus 85 ~y~L~~N~--~~n~lHG~~~g~~~~~w~v~~~~~~~~~~~v~l~~~~~~~~~---gyP~~~~~~v~y~L~~~~~l~i~~~ 159 (478)
+|+|++|+ ++|++|||.+ ++.|++.....+++..+|+|++.++++++ ||||+++++|+|+|+ +++|.|+|+
T Consensus 94 ~y~l~~N~~~~~~~lHG~~~---~~~W~v~~~~~~~~~~~v~~~~~~~d~~~~~~g~P~~~~~~v~y~L~-~~~L~i~~~ 169 (341)
T 3os7_A 94 TYKFPINEAKNNNYIHGFIK---NSKWTVHKKKIDQDKALVEVVFDFTKENEAYKYFSHEFQFKLSYELS-SKGLKQTTS 169 (341)
T ss_dssp EEECCCSBTTTTEEESCSGG---GSCCEEEEEEEETTEEEEEEEEEECTTSTTTTTSCCCEEEEEEEEEE-TTEEEEEEE
T ss_pred EEEccCCCCCCCcCccCCcc---cCcEEEEEeecCCCccEEEEEEEeCCCcchhhcCCceEEEEEEEEEe-CCeEEEEEE
Confidence 99999998 4899999966 99999988754333346888998877665 999999999999998 579999999
Q ss_pred EEeC-CCceeEeccCCcccccCCCCCCCccCeEEEEeCceEEeeCCCCCCCCceeccCCCCCCCCCCeeecccccCCCCC
Q 047922 160 AKAR-NKATPVNLAQHSYWNLGGHSSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPGG 238 (478)
Q Consensus 160 ~~n~-~~~~p~nlg~HpyFnl~~~~~~~i~d~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g 238 (478)
++|. +++|||++|+||||||+++..+++.+|+|++++++++++|++.||||++.+++++++||+....+.. ..+
T Consensus 170 ~~N~~~~~~p~~~~~H~yF~l~~~~~~~~~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~~~~df~~~~~~~~-----~~~ 244 (341)
T 3os7_A 170 VVNLSSEEMPLSVGYHSAFNVPFIEGSEDSNCRVKISIDKFWKQDSRNLPTGESFAPTGEQKEYLENGVAVA-----SHP 244 (341)
T ss_dssp EEECSSSCEEECCEECCEEESSCBTTCCGGGEEEEECEEEEEEECTTSCEEEEEECCCGGGGGGGTTCBCTT-----SSC
T ss_pred EEeCCCCcEEEEEecCceeecCCCCCCCcccEEEEEeCCcEEecCcccCCCCccccCCCccchhhcCCcccC-----Ccc
Confidence 9998 9999999999999999987667899999999999999999999999999999999999986432211 135
Q ss_pred cceeEEecCCCCcccceeEEEEEcCCCCeEEEEEecCCceEEEcCCceeeeeeEEEEEeeccCCcceeecccceeecCCC
Q 047922 239 YDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLAQHSYWNLGGH 318 (478)
Q Consensus 239 ~D~~f~l~~~~~~~~~~~~~~l~~~~sg~~L~v~~~~p~~q~yt~~~~~~~l~v~~~a~~~~~~~p~~~~~H~yfnl~g~ 318 (478)
|||||+++...
T Consensus 245 ~D~~f~~~~~~--------------------------------------------------------------------- 255 (341)
T 3os7_A 245 IESLFSLKDID--------------------------------------------------------------------- 255 (341)
T ss_dssp CEEEEEECCEE---------------------------------------------------------------------
T ss_pred hhhhccccccc---------------------------------------------------------------------
Confidence 77777654100
Q ss_pred CCCCeeceEEEEeccceeccCCCCCcccceeccCCCCcccCCceeccccccCCCcccceeEEeccCCCcccceeEEEEEc
Q 047922 319 NSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHD 398 (478)
Q Consensus 319 ~~~~v~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~~~~~~~~~~~~~~a~l~~ 398 (478)
+ .. .....|+|.+
T Consensus 256 --------------------------------------------------------~-------~g----~~~~~~~l~~ 268 (341)
T 3os7_A 256 --------------------------------------------------------V-------NG----KTFRGACIED 268 (341)
T ss_dssp --------------------------------------------------------E-------TT----EEECEEEEEE
T ss_pred --------------------------------------------------------c-------CC----CcceEEEEEe
Confidence 0 00 0013578889
Q ss_pred CCCCcEEEEEe--cCCeeEEEeCCccccccCCCCeeeecceEEEEccCC-CCCCCCCCCC----CCceecCCCEEEEEEE
Q 047922 399 KKSGRVMELLA--DQPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQA-FPDSVNHPNF----PNTIVYPGEKYKHHML 471 (478)
Q Consensus 399 ~~sg~~l~v~t--~~p~~qvyT~~~~~~~~~~~~~~~~~~~~i~~E~~~-~pda~n~~~~----~~~~l~pg~~~~~~~~ 471 (478)
+.+|++|+|++ ++|++||||++. ++.+||||||+ +|||+|++.+ +.++|+|||+|+.+++
T Consensus 269 ~~~g~~l~v~~~~~~p~~~vwt~~~-------------~~~~vclEP~~~~pDa~n~~~~~~~~g~~~L~PGe~~~~~~~ 335 (341)
T 3os7_A 269 ASKNTRVVYEMSSEYKYLVIWNDMG-------------DKKYACIEPQTSIINSPNVKLDRSVSGFKTLKPNESWSGVCK 335 (341)
T ss_dssp GGGTEEEEEEECTTCCEEEEECGGG-------------CSSEEEEEEESSCTTGGGCSSCHHHHCCEEECTTCEEEEEEE
T ss_pred CCCCeEEEEEeCCCCCEEEEEcCCC-------------CCCEEEECCccCCCCccCCCCcccccCceEECCCCEEEEEEE
Confidence 99999999999 799999999972 35799999997 9999999875 6889999999999999
Q ss_pred EEEEe
Q 047922 472 YKFST 476 (478)
Q Consensus 472 y~f~~ 476 (478)
+++..
T Consensus 336 i~v~~ 340 (341)
T 3os7_A 336 LYIEN 340 (341)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 88864
No 9
>3mwx_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.45A {Bacillus subtilis}
Probab=100.00 E-value=1.7e-52 Score=422.30 Aligned_cols=298 Identities=17% Similarity=0.236 Sum_probs=251.2
Q ss_pred EEEEEEEEeCCEEEEEe-ccCceEEEEEeeCCCCceeeEEecCCChhhcccCCCcccceeecCCCccCCcEEEECCEEEE
Q 047922 9 EVKFYELKKGDFSVKFT-NWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTLDGTHYK 87 (478)
Q Consensus 9 ~~~~~~L~n~~~~v~v~-~~Ga~i~~l~~~d~~G~~~dvv~g~~~~~~y~~~~~~~G~~lgp~anRI~~g~~~~~G~~y~ 87 (478)
.+..|+|+|+.++|+|. ++||+|+||+.++ .| +++||++++.+.|..++.++|++|+|+||||++|+|+++|++|+
T Consensus 13 g~~~~~L~n~~~~~~i~p~~GA~l~s~~~~~-~g--~~~l~~~~~~~~~~~~~~~~G~pv~~p~nRi~~g~~~~~G~~y~ 89 (326)
T 3mwx_A 13 GTPAIKAGNEHLEMIVVPEWGSNVISLVDKT-TN--VQLLREPETAESFHDTPTLYGIPILFPPNRISDGTFSFRGRTYH 89 (326)
T ss_dssp TEEEEEEEESSEEEEEETTTTTEEEEEEETT-TT--EECBCCCSSHHHHHHCTTSSSCCEEBSCSEEETTEEEETTEEEE
T ss_pred CeEEEEEECCCEEEEEchhcCCEEEEEEecC-CC--ceEEccCcChhHhhcCccccCceEcCCCCcccCCEEEECCEEEE
Confidence 46789999999999999 6999999999864 35 79999999999998888899998988899999999999999999
Q ss_pred eecCC--CCCCCCCCCCCCCccceEEEEEecCCCCCEEEEEEEeCCCCC---CCCceeEEEEEEEEeCCCeEEEEEEEEe
Q 047922 88 LVANE--KSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHSTDGEE---GFPGDLDVTVSYSLTSEKELSVKMKAKA 162 (478)
Q Consensus 88 L~~N~--~~n~lHG~~~g~~~~~w~v~~~~~~~~~~~v~l~~~~~~~~~---gyP~~~~~~v~y~L~~~~~l~i~~~~~n 162 (478)
|++|+ ++|++|||++ ++.|++.....+++..+|+|++.++++++ ||||+++++|+|+|+ +++|.|+|+++|
T Consensus 90 l~~N~~~~~~~lHG~~~---~~~W~v~~~~~~~~~~~v~~~~~~~~~~~~~~g~P~~~~~~v~y~L~-~~~L~i~~~~~N 165 (326)
T 3mwx_A 90 FDINEKDKHNHLHGFLY---HEKWNVVTTKQTDEGVIVETEIDLSELPHVQKQFPHHAVVRMTYTIK-ENTLFKHATVMN 165 (326)
T ss_dssp CCCCBTTTTEEESBSCT---TSCCEEEEEEEESSCEEEEEEEEGGGCHHHHHHSCSCEEEEEEEEEE-TTEEEEEEEEEE
T ss_pred ccCCCCCCCccccCCcc---CCceEEEEeeccCCceEEEEEEEeCCCCccccCCCceEEEEEEEEEc-CCcEEEEEEEEE
Confidence 99998 6899999976 99999988754333457899999877654 999999999999998 589999999999
Q ss_pred C-CCceeEeccCCcccccCCCCCCCccCeEEEEeCceEEeeCCCCCCCCceeccCCCCCCCCCCeeecccccCCCCCcce
Q 047922 163 R-NKATPVNLAQHSYWNLGGHSSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPGGYDI 241 (478)
Q Consensus 163 ~-~~~~p~nlg~HpyFnl~~~~~~~i~d~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~ 241 (478)
. +++|||++|+||||||+ +.+|+|++++++++++|+++||||++.++ ++.+||+.++.+. ..++||
T Consensus 166 ~~~~~~~~~~~~H~yFnl~------~~~~~l~~~a~~~~~~d~~~iptg~~~~~-~~~~~~~~~~~~~------~~~~D~ 232 (326)
T 3mwx_A 166 KGKEAFPWGIGYHTTFIFP------AESSLFSLTADQQWELDERLLPTGKLMDV-PYKEALHEGMDLR------HKQLDD 232 (326)
T ss_dssp CSSSCEEECCEECCCEECC------TTTEEEEESEEEEEEECTTSCEEEEEEEC-TTHHHHHHCBCCT------TCCCEE
T ss_pred CCCCceeeEEeeccccCCC------CCCEEEEEECCcEEEeCCccCCCCccccC-cchhhcccCcccC------Cccccc
Confidence 8 99999999999999997 56999999999999999999999999887 7777776543211 123455
Q ss_pred eEEecCCCCcccceeEEEEEcCCCCeEEEEEecCCceEEEcCCceeeeeeEEEEEeeccCCcceeecccceeecCCCCCC
Q 047922 242 NYVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLAQHSYWNLGGHNSG 321 (478)
Q Consensus 242 ~f~l~~~~~~~~~~~~~~l~~~~sg~~L~v~~~~p~~q~yt~~~~~~~l~v~~~a~~~~~~~p~~~~~H~yfnl~g~~~~ 321 (478)
||++..
T Consensus 233 ~f~~~~-------------------------------------------------------------------------- 238 (326)
T 3mwx_A 233 VFLSSY-------------------------------------------------------------------------- 238 (326)
T ss_dssp EEEESH--------------------------------------------------------------------------
T ss_pred eeeecc--------------------------------------------------------------------------
Confidence 555431
Q ss_pred CeeceEEEEeccceeccCCCCCcccceeccCCCCcccCCceeccccccCCCcccceeEEeccCCCcccceeEEEEEcCCC
Q 047922 322 DILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHDKKS 401 (478)
Q Consensus 322 ~v~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~~~~~~~~~~~~~~a~l~~~~s 401 (478)
... .....|+|.++.+
T Consensus 239 --------------------------------------------------------------~~~--~~~~~~~l~~~~~ 254 (326)
T 3mwx_A 239 --------------------------------------------------------------QKR--GGENQAVIYHQHA 254 (326)
T ss_dssp --------------------------------------------------------------HHH--CSCCEEEEEETTT
T ss_pred --------------------------------------------------------------ccC--CCceEEEEEeCCC
Confidence 000 1124578889999
Q ss_pred CcEEEEE--ecCCeeEEEeCCccccccCCCCeeeecceEEEEccCC-CCCCCCCCC----CCCceecCCCEEEEEEEEEE
Q 047922 402 GRVMELL--ADQPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQA-FPDSVNHPN----FPNTIVYPGEKYKHHMLYKF 474 (478)
Q Consensus 402 g~~l~v~--t~~p~~qvyT~~~~~~~~~~~~~~~~~~~~i~~E~~~-~pda~n~~~----~~~~~l~pg~~~~~~~~y~f 474 (478)
|++|+|+ +++|++||||++. .+.+||||||+ +|||+|++. ++.++|+|||+|+.+++|+|
T Consensus 255 g~~l~~~~~~~~p~~~vwt~~~-------------~~~~vclEP~~~~~da~n~~~~~~~~g~~~L~PGe~~~~~~~i~~ 321 (326)
T 3mwx_A 255 HISIIYKADEQFKHWVVYNADG-------------KQGYLCPEPYTWVTNAVNLDLPSSLTGLQVLEPGEETTAKSSITI 321 (326)
T ss_dssp TEEEEEEECTTCCEEEEECTTS-------------CSSEEEEEEESSCTTGGGCCSCHHHHCCEEECTTCEEEEEEEEEE
T ss_pred CEEEEEEeCCCCCEEEEECCCC-------------CCCEEEECCccCCCCccccCCCccccCCeEECCCCeEEEEEEEEE
Confidence 9999999 4799999999973 35699999999 999999974 46789999999999999999
Q ss_pred Eec
Q 047922 475 STK 477 (478)
Q Consensus 475 ~~~ 477 (478)
...
T Consensus 322 ~~~ 324 (326)
T 3mwx_A 322 ELN 324 (326)
T ss_dssp EEC
T ss_pred Eec
Confidence 863
No 10
>3q1n_A Galactose mutarotase related enzyme; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.61A {Lactobacillus casei}
Probab=100.00 E-value=1.5e-46 Score=373.40 Aligned_cols=278 Identities=18% Similarity=0.254 Sum_probs=222.0
Q ss_pred EEEEEeCCEEEEEeccCceEEEEEeeCCCCceeeEEecCCChhhcccCCCcccceeecCCCccCCcEEEECCEEEEeecC
Q 047922 12 FYELKKGDFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTLDGTHYKLVAN 91 (478)
Q Consensus 12 ~~~L~n~~~~v~v~~~Ga~i~~l~~~d~~G~~~dvv~g~~~~~~y~~~~~~~G~~lgp~anRI~~g~~~~~G~~y~L~~N 91 (478)
+|+|+|+.++|+|.++||+|+||++++ +| +|+||+.+ +.|... .|++||||||||++|+|+++|++|+|+
T Consensus 2 ~~~l~n~~~~~~i~~~Ga~l~s~~~~~-~g--~e~l~~~~--~~~~~~---~~p~l~P~~~Ri~~g~~~~~G~~y~l~-- 71 (294)
T 3q1n_A 2 MITIENSKFKAGIAERGAELQSLVNKA-DN--YEYVWTGD--KTFWNR---HAPILFPSIGKSNQDQYRLGAKTYPMS-- 71 (294)
T ss_dssp EEEEECSSEEEEEETBTTEEEEEEETT-TT--EECBCCCC--TTTCSC---SCCEEBSCCSCCGGGEEEETTEEEECC--
T ss_pred EEEEECCCEEEEEEccCcEEEEEEeCC-CC--CEEEEcCC--hhhccC---CCCEEEeccCCcCCCEEEECCcEEccC--
Confidence 689999999999999999999999863 56 79999765 233322 369999999999999999999999998
Q ss_pred CCCCCCCCCCCCCCccceEEEEEecCCCCCEEEEEEEeCCC-CCCCCceeEEEEEEEEeCCCeEEEEEEEEeC-CCceeE
Q 047922 92 EKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHSTDG-EEGFPGDLDVTVSYSLTSEKELSVKMKAKAR-NKATPV 169 (478)
Q Consensus 92 ~~~n~lHG~~~g~~~~~w~v~~~~~~~~~~~v~l~~~~~~~-~~gyP~~~~~~v~y~L~~~~~l~i~~~~~n~-~~~~p~ 169 (478)
+||+++ ++.|++...++ ++|+|++.++++ ++||||+++++|+|+|+ +++|.|+|+++|. +++|||
T Consensus 72 -----~HGf~r---~~~w~~~~~~~----~~v~l~l~~~~~~~~~yP~~~~~~v~y~L~-~~~L~i~~~~~N~~~~~~p~ 138 (294)
T 3q1n_A 72 -----QHGFAR---DYDFDVSDKSD----SAVTFTQHQNAETLKKFPFEYTLAVTYMLT-DGGLSVHYTVTNDDSKSMPF 138 (294)
T ss_dssp -----TTBSGG---GSBCEEESCCS----SEEEEEEECCHHHHHHSCCCEEEEEEEEEE-TTEEEEEEEEEECSSSCEEE
T ss_pred -----CCCCcc---CcceEEEEccC----CEEEEEEEcCcchhhcCCeEEEEEEEEEEe-CCEEEEEEEEEcCCCCceee
Confidence 799987 89999986543 689999998765 78999999999999998 5899999999998 999999
Q ss_pred eccCCcccccCCCCCCCccCeEEEEeCce----EEeeCCCCCCCCceeccCCCCCCCCCCeeecccccCCCCCcceeEEe
Q 047922 170 NLAQHSYWNLGGHSSGDILSQEVQIFASS----YTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPGGYDINYVL 245 (478)
Q Consensus 170 nlg~HpyFnl~~~~~~~i~d~~L~i~a~~----~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~l 245 (478)
++|+|||||+++...+++.+|+|+|++++ ++++|+..+|+|+. +||+.+ .+..+...+.+|||
T Consensus 139 ~~~~H~yFnl~~~~~~~~~d~~l~~~a~~~~~~~~~~~~~~l~~g~~-------~~~~~~--~~~~~~l~~~~fd~---- 205 (294)
T 3q1n_A 139 ALGFHPAFNVGLKADGSFDDYDLTVEPLNSPLQRFGIGPVPFRNGDV-------EDIPGA--EGNRLPLTHDLLDG---- 205 (294)
T ss_dssp CEEECCEEECCBCTTSSBCSCEEEEECCSSCCEEEEESSTTSEEEEE-------EECTTC--BTTEEECCHHHHTT----
T ss_pred eEecCcEEEcCCCCCCcccCEEEEEcCCcccceEEeeCCCCcCCCcc-------cccccC--CCceecCCHHHhcC----
Confidence 99999999999866678999999999999 99999888898863 233221 00000000112332
Q ss_pred cCCCCcccceeEEEEEcCCCCeEEEEEecCCceEEEcCCceeeeeeEEEEEeeccCCcceeecccceeecCCCCCCCeec
Q 047922 246 DKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILS 325 (478)
Q Consensus 246 ~~~~~~~~~~~~~~l~~~~sg~~L~v~~~~p~~q~yt~~~~~~~l~v~~~a~~~~~~~p~~~~~H~yfnl~g~~~~~v~~ 325 (478)
T Consensus 206 -------------------------------------------------------------------------------- 205 (294)
T 3q1n_A 206 -------------------------------------------------------------------------------- 205 (294)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEEeccceeccCCCCCcccceeccCCCCcccCCceeccccccCCCcccceeEEeccCCCcccceeEEEEEcCCCCcEE
Q 047922 326 QEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVM 405 (478)
Q Consensus 326 ~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~~~~~~~~~~~~~~a~l~~~~sg~~l 405 (478)
++|+++... ...++|.++++|+.|
T Consensus 206 ---------------------------------------------------d~~~~~~~~-----~~~~~l~~~~~g~~l 229 (294)
T 3q1n_A 206 ---------------------------------------------------GLVILANSE-----IAKATLASPHHDHSI 229 (294)
T ss_dssp ---------------------------------------------------CCEEECCTT-----CCEEEEECTTCSCCE
T ss_pred ---------------------------------------------------CeEEEcCCC-----ccEEEEEeCCCCcEE
Confidence 144443211 235788899999999
Q ss_pred EEEec-CCeeEEEeCCccccccCCCCeeeecceEEEEccCC-CCCCCCCCCC-----CCceecCCCEEEEEEEEE
Q 047922 406 ELLAD-QPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQA-FPDSVNHPNF-----PNTIVYPGEKYKHHMLYK 473 (478)
Q Consensus 406 ~v~t~-~p~~qvyT~~~~~~~~~~~~~~~~~~~~i~~E~~~-~pda~n~~~~-----~~~~l~pg~~~~~~~~y~ 473 (478)
+|+++ +|++||||++. .++.+||||||+ +|||+|++.+ +.++|+|||+++.+...+
T Consensus 230 ~v~~~~~p~l~iwt~~~------------~~~~~vciEP~tg~~Da~n~~~~~~~k~g~~~L~pGe~~~~~~~I~ 292 (294)
T 3q1n_A 230 TLDISDFPYLTIWSPEH------------KKAPFIAVEPFDGLPDQAGEPTDWYTKLGNTTLSAGANKQLALKVE 292 (294)
T ss_dssp EEECTTCSEEEEECCTT------------SCCSEEEEEEEESCCCBSSSCCBTTTCTTCEEECTTCEEEEEEEEE
T ss_pred EEEECCCCEEEEECcCC------------CCCCEEEEeCcCCCCCCCCCCCchhccCCCEEECCCCEEEEEEEEE
Confidence 99986 89999999962 136799999996 9999999863 578999999988765544
No 11
>3dcd_A Galactose mutarotase related enzyme; Q5FKD7 LAR33 NESG X-RAY, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Lactobacillus acidophilus}
Probab=100.00 E-value=4.3e-44 Score=357.44 Aligned_cols=277 Identities=13% Similarity=0.208 Sum_probs=219.9
Q ss_pred EEEEEEeCCEEEEEeccCceEEEEEeeCCCCceeeEEecCCChhhcccCCCccc---ceeecCCCccCCcEEEECCEEEE
Q 047922 11 KFYELKKGDFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFG---SVVGRVANRIGGAQFTLDGTHYK 87 (478)
Q Consensus 11 ~~~~L~n~~~~v~v~~~Ga~i~~l~~~d~~G~~~dvv~g~~~~~~y~~~~~~~G---~~lgp~anRI~~g~~~~~G~~y~ 87 (478)
|+|+|+|+.++|+|.++||+|+||+.++ +| +|+||+. ++.+|| ++||||||||++|+|+++|++|+
T Consensus 1 m~~~l~n~~~~~~i~~~GA~l~s~~~~~-~~--~e~l~~~--------~~~~~~~~~pil~P~~nRi~~g~~~~~G~~y~ 69 (307)
T 3dcd_A 1 MDYTIENNMIKVVISDHGAEIQSVKSAH-TD--EEFMWQA--------NPEIWGRHAPVLFPIVGRLKNDEYTYKGKTYH 69 (307)
T ss_dssp CEEEEECSSEEEEEETBTTEEEEEEETT-TC--CBCBCCC--------CTTTCCCSSCEEBSCSSCCGGGEEEETTEEEE
T ss_pred CEEEEECCCEEEEEEccCcEEEEEEECC-CC--cEEEECC--------ChhhcCCCCcEEEeecCccCCCeEEECCEEEe
Confidence 3689999999999999999999999432 24 6999863 234555 89999999999999999999999
Q ss_pred eecCCCCCCCCCCCCCCCccceEEEEEecCCCCCEEEEEEEeC-CCCCCCCceeEEEEEEEEeCCCeEEEEEEEEeC-CC
Q 047922 88 LVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHST-DGEEGFPGDLDVTVSYSLTSEKELSVKMKAKAR-NK 165 (478)
Q Consensus 88 L~~N~~~n~lHG~~~g~~~~~w~v~~~~~~~~~~~v~l~~~~~-~~~~gyP~~~~~~v~y~L~~~~~l~i~~~~~n~-~~ 165 (478)
|+ +||+++ ++.|++...++ ++|+|++.++ ++.++|||+++++++|+|+ +++|.|+|+++|. ++
T Consensus 70 l~-------~HGf~r---~~~w~v~~~~~----~~v~l~l~~~~~~~~~yP~~~~~~v~y~L~-~~~L~i~~~v~N~g~~ 134 (307)
T 3dcd_A 70 LG-------QHGFAR---NADFEVENHTK----ESITFLLKDNEETRKVYPFKFEFRVNYNLM-NNLLEENFSVVNKSDE 134 (307)
T ss_dssp CC-------TTBSGG---GSBCEEEEEET----TEEEEEEECCHHHHHHSCCCEEEEEEEEEE-TTEEEEEEEEEECSSS
T ss_pred cC-------CCCCcc---CcEEEEEEecC----CEEEEEEecCcchhhhCCCceEEEEEEEEe-CCEEEEEEEEECCCCC
Confidence 98 799987 89999987654 6899999986 5788999999999999998 6899999999999 89
Q ss_pred ceeEeccCCcccccCCCCCCCccCeEEEEeCceEEeeCCCCCCCCceeccC-CCCCCCCCCeeecccccCCCCCcc-eeE
Q 047922 166 ATPVNLAQHSYWNLGGHSSGDILSQEVQIFASSYTPVDDQLIPTGKIETVE-GTPYDFLQPHTIGSSIDKLPGGYD-INY 243 (478)
Q Consensus 166 ~~p~nlg~HpyFnl~~~~~~~i~d~~L~i~a~~~~~~d~~~iPtG~~~~v~-~t~~Df~~~~~i~~~~~~~~~g~D-~~f 243 (478)
+|||++|+|||||+++...+++.+|+|+|++++.++. ..+|+|.+ +.. .+.++++....|... .|| ++|
T Consensus 135 ~~p~~~g~HpyF~~~~~~~~~~~d~~L~~~a~~~~~~--~~l~~g~~-~~~~~~~~~~~~~~~l~~~------~fd~da~ 205 (307)
T 3dcd_A 135 TMIFGVGGHPGFNLPTDHGENKEDFYFDMHPSVTRVR--IPLKDASL-DWNNRSLAPTDSLIALSDD------LFKDDAL 205 (307)
T ss_dssp CEEECEEECCEEECCCTTSCCGGGEEEEEESCCCEEE--CCEETTEE-CGGGCEEECTTSCEECCSG------GGTTSCE
T ss_pred cEeEEEEcCcEEEcCCCCCCccccEEEEEcCCCceee--eecCCccc-ccccccccccCCcccCCHH------HcCCceE
Confidence 9999999999999998666789999999999987653 34577743 332 233444443333222 133 233
Q ss_pred EecCCCCcccceeEEEEEcCCCCeEEEEEecCCceEEEcCCceeeeeeEEEEEeeccCCcceeecccceeecCCCCCCCe
Q 047922 244 VLDKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDI 323 (478)
Q Consensus 244 ~l~~~~~~~~~~~~~~l~~~~sg~~L~v~~~~p~~q~yt~~~~~~~l~v~~~a~~~~~~~p~~~~~H~yfnl~g~~~~~v 323 (478)
+++
T Consensus 206 ~~~----------------------------------------------------------------------------- 208 (307)
T 3dcd_A 206 IYE----------------------------------------------------------------------------- 208 (307)
T ss_dssp EEE-----------------------------------------------------------------------------
T ss_pred EEc-----------------------------------------------------------------------------
Confidence 333
Q ss_pred eceEEEEeccceeccCCCCCcccceeccCCCCcccCCceeccccccCCCcccceeEEeccCCCcccce-eEEEEEcCCCC
Q 047922 324 LSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKMR-KVAIVHDKKSG 402 (478)
Q Consensus 324 ~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~~~~~~~~~~~~-~~a~l~~~~sg 402 (478)
.. .. ..++|.++++|
T Consensus 209 -----------------------------------------------------------~~-----~~~~~v~l~~~~~g 224 (307)
T 3dcd_A 209 -----------------------------------------------------------LR-----GNDNKVSLRTDKNK 224 (307)
T ss_dssp -----------------------------------------------------------CC-----SSCEEEEEEETTSS
T ss_pred -----------------------------------------------------------CC-----CCceEEEEEeCCCC
Confidence 11 12 35778889999
Q ss_pred cEEEEEec-CCeeEEEeCCccccccCCCCeeeecceEEEEccCC-CCCCCCCCC-----CCCceecCCCEEEEEEEEEEE
Q 047922 403 RVMELLAD-QPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQA-FPDSVNHPN-----FPNTIVYPGEKYKHHMLYKFS 475 (478)
Q Consensus 403 ~~l~v~t~-~p~~qvyT~~~~~~~~~~~~~~~~~~~~i~~E~~~-~pda~n~~~-----~~~~~l~pg~~~~~~~~y~f~ 475 (478)
+.|+|..+ +|+++|||++. +...+||||||+ +|||+|.+. .+.++|+|||+++....+++.
T Consensus 225 ~~v~v~~~~fp~l~iwt~~~------------~~~~fvciEP~tg~~Da~n~~~~~~~k~gl~~L~PGe~~~~~~~i~~~ 292 (307)
T 3dcd_A 225 FHVNVWTRDAPFVGIWSQYP------------KTDNYVCIEPWWGIADRDDADGDLEHKYGMNHLKPGKEFQAGFSMTYH 292 (307)
T ss_dssp CEEEEEEETCSEEEEECCSS------------SCCSEEEEEEEESCCCBTTCCSBGGGCTTCEEECTTCEEEEEEEEEEE
T ss_pred cEEEEEECCCCEEEEECcCC------------CCCCEEEEccccCCCCCCCCCCchhccCCCEEECCCCEEEEEEEEEEE
Confidence 99999885 79999999841 135689999997 999999875 367899999999988887765
No 12
>2hta_A Putative enzyme related to aldose 1-epimerase; carbohydrate, MU YEAD, GALM, sugar phosphate, isomerase; 1.90A {Salmonella typhimurium} PDB: 2htb_A
Probab=100.00 E-value=1.1e-38 Score=319.07 Aligned_cols=261 Identities=14% Similarity=0.188 Sum_probs=204.8
Q ss_pred EEEEEEEEeCCEEEEEeccCceEEEEEeeCCCCceeeEEecCCChhhcccCCCccc--ceeecCCCccCCcEEEECCEEE
Q 047922 9 EVKFYELKKGDFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFG--SVVGRVANRIGGAQFTLDGTHY 86 (478)
Q Consensus 9 ~~~~~~L~n~~~~v~v~~~Ga~i~~l~~~d~~G~~~dvv~g~~~~~~y~~~~~~~G--~~lgp~anRI~~g~~~~~G~~y 86 (478)
.+..|+|+|+.++|+|+++||+|+||+++ +| +|+|++. +.+.|.....++| ++||||+|||++|
T Consensus 40 ~~~~~~L~n~~~~a~I~~~GA~l~s~~~~--~g--~evL~~~-~~~~~~~~~~~~GG~pil~P~~gRi~~g--------- 105 (309)
T 2hta_A 40 DLDLIVVDHPQVKASFALQGAHLLSWKPV--GE--EEVLWLS-NNTPFKTGVALRGGVPICWPWFGPAAQQ--------- 105 (309)
T ss_dssp TEEEEEEEETTEEEEEETBTTEEEEEEET--TS--CCCBCBC-TTCCCCTTCCCSBSBCEEBSCCSSCSST---------
T ss_pred CceEEEEeCCCeEEEEeccCcEEEEEEeC--CC--CEEEeCC-chHhccCCCCeeccceEEEecCCCCCCC---------
Confidence 46789999999999999999999999986 24 6888865 6777877666775 5999999999983
Q ss_pred EeecCCCCCCCCCCCCCCCccceEEEEEecCCCCCEEEEEEEeC-CCCCCCCceeEEEEEEEEeCCCeEEEEEEEEeCCC
Q 047922 87 KLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHST-DGEEGFPGDLDVTVSYSLTSEKELSVKMKAKARNK 165 (478)
Q Consensus 87 ~L~~N~~~n~lHG~~~g~~~~~w~v~~~~~~~~~~~v~l~~~~~-~~~~gyP~~~~~~v~y~L~~~~~l~i~~~~~n~~~ 165 (478)
++.+||+++ ++.|+++....+++..+|+|++.++ +++++|||+++++++|+| +++|+|+|+++|
T Consensus 106 -------~~~~HGfar---~~~W~v~~~~~~~~~~~v~l~l~s~~~~~~gyP~~~~l~vty~L--~~~L~i~~~~~N--- 170 (309)
T 2hta_A 106 -------GLPSHGFAR---NLPWALKAHNEDDNGVMLTFELQSSEATRKYWPHDFTLLARFKV--GKTCEIELEAHG--- 170 (309)
T ss_dssp -------TCCTTBSGG---GSBCEEEEEEECSSCEEEEEEEECCHHHHHHSCCCCEEEEEEEE--SSSEEEEEEEES---
T ss_pred -------CCCCccCcC---CCceEEEeEecCCCceEEEEEeCCChHHhhcCCCceEEEEEEEE--CCceEEEEEEEC---
Confidence 256999988 8999998765432335799999886 477999999999999999 489999999997
Q ss_pred ceeEeccCCcccccCCCCCCCccCeEEEEeCceEEeeCCCCCCCCceeccCCCCCCCCCCeeecccccCCCCCcceeEEe
Q 047922 166 ATPVNLAQHSYWNLGGHSSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPGGYDINYVL 245 (478)
Q Consensus 166 ~~p~nlg~HpyFnl~~~~~~~i~d~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~l 245 (478)
++||++|+|||||+++ +.++.|++.++.+++ .+|+|++.++.++++||+. ++|++|+
T Consensus 171 ~~~~~~g~H~YFnl~~-----~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~df~~-------------~~D~~~~- 227 (309)
T 2hta_A 171 EFATTSALHSYFNVGD-----IANVKVSGLGDRFID----KVNDAKEGVLTDGIQTFPD-------------RTDRVYL- 227 (309)
T ss_dssp SEEEEEEECCEEECSC-----GGGCEEECCCSEEEE----TTTTTEEEECSSSCEECSS-------------CEEEEES-
T ss_pred CeEehhcCCceEecCC-----ccceEEECCCCceEe----ccCCcccccccCCceecCC-------------ccCcEEe-
Confidence 9999999999999975 457888888777764 4778777667777666652 2455552
Q ss_pred cCCCCcccceeEEEEEcCCCCeEEEEEecCCceEEEcCCceeeeeeEEEEEeeccCCcceeecccceeecCCCCCCCeec
Q 047922 246 DKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILS 325 (478)
Q Consensus 246 ~~~~~~~~~~~~~~l~~~~sg~~L~v~~~~p~~q~yt~~~~~~~l~v~~~a~~~~~~~p~~~~~H~yfnl~g~~~~~v~~ 325 (478)
+.
T Consensus 228 ~~------------------------------------------------------------------------------ 229 (309)
T 2hta_A 228 NP------------------------------------------------------------------------------ 229 (309)
T ss_dssp SC------------------------------------------------------------------------------
T ss_pred CC------------------------------------------------------------------------------
Confidence 20
Q ss_pred eEEEEeccceeccCCCCCcccceeccCCCCcccCCceeccccccCCCcccceeEEeccCCCcccceeEEEEEcCCCCcEE
Q 047922 326 QEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVM 405 (478)
Q Consensus 326 ~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~~~~~~~~~~~~~~a~l~~~~sg~~l 405 (478)
...++|.++.+|++|
T Consensus 230 -----------------------------------------------------------------~~~~~l~~~~~g~~l 244 (309)
T 2hta_A 230 -----------------------------------------------------------------EACSVIHDATLNRTI 244 (309)
T ss_dssp -----------------------------------------------------------------CSEEEEEETTTTEEE
T ss_pred -----------------------------------------------------------------CCCEEEEeCCCCcEE
Confidence 123577889999999
Q ss_pred EEEec-CCeeEEEeCCcccc---ccCCCCeeeecceEEEEccCCCCCCCCCCCCCCceecCCCEEEEEEEEEEE
Q 047922 406 ELLAD-QPGVQYYTGGQIKE---VRGKGGFVYKKHAGLCLETQAFPDSVNHPNFPNTIVYPGEKYKHHMLYKFS 475 (478)
Q Consensus 406 ~v~t~-~p~~qvyT~~~~~~---~~~~~~~~~~~~~~i~~E~~~~pda~n~~~~~~~~l~pg~~~~~~~~y~f~ 475 (478)
+|+++ +|++||||+ +... ..+..+.. .+.+||||||+. ++.++|+|||+|+.+++|+|.
T Consensus 245 ~v~~~~~p~~~vwtp-~~~~~~~~~d~~~~~--~~~~vClEp~~~--------~~~~~L~PGe~~~~~~~~~~~ 307 (309)
T 2hta_A 245 DVVHHHHLNVVGWNP-GPALSVSMGDMPDDG--YKTFVCVETVYA--------TAPQQATEEKPSRLAQTICVA 307 (309)
T ss_dssp EEEEESCSEEEEEEC-HHHHHHHCTTSCTTG--GGGEEEEEEEEE--------EEEEEEBTTBCEEEEEEEEEE
T ss_pred EEEECCCCcEEEECC-CcccccccccCCccc--cccEEEECeeec--------CCCEEECCCCeEEEEEEEEEe
Confidence 99997 999999998 3221 11111111 246999999996 578899999999999999986
No 13
>3k25_A SLR1438 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, SGR112, P73504_SYNY3; 2.55A {Synechocystis SP}
Probab=100.00 E-value=6.8e-38 Score=310.43 Aligned_cols=270 Identities=18% Similarity=0.292 Sum_probs=207.7
Q ss_pred CcEEEEEEEEeC--CEEEEEe-ccCceEEEEEeeCCCCceeeEEecCCChhhcccCC--Ccccc-eeecCCCccCCcEEE
Q 047922 7 SEEVKFYELKKG--DFSVKFT-NWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDT--TYFGS-VVGRVANRIGGAQFT 80 (478)
Q Consensus 7 ~~~~~~~~L~n~--~~~v~v~-~~Ga~i~~l~~~d~~G~~~dvv~g~~~~~~y~~~~--~~~G~-~lgp~anRI~~g~~~ 80 (478)
.+.+..|+|+|+ +++++|. ++||.|+||+. +| +|+|+ ++. +.|.... .+.|+ +|+||+|||++|+|.
T Consensus 8 ~~~~~~~~l~n~~~g~~~~v~~~~Ga~l~s~~~---~g--~~~l~-~~~-~~~~~~~~~~~gg~Pvl~P~~gri~~g~~~ 80 (289)
T 3k25_A 8 PDRPLTYHLEDDQSLARLSLVPGRGGLVTEWTV---QG--QPILY-FDR-ERFQDPSLSVRGGIPILFPICGNLPQDQFN 80 (289)
T ss_dssp CCBCCEEEEEETTTTEEEEEEGGGTSEEEEEEE---TT--EECBC-BCT-TGGGSTTSCCCBSBCEEBSCSSCCGGGEEE
T ss_pred cCCceEEEEECCCCCeEEEeehhcCCEEEEEEe---CC--EEEEe-cCh-hhccCcccccCCCCCEEECCCCCCCCCEEE
Confidence 456889999984 7999997 79999999997 46 58775 543 4444432 24464 899999999999999
Q ss_pred ECCEEEEeecCCCCCCCCCCCCCCCccceEEEEEecCCCCCEEEEEEEeCC-CCCCCCceeEEEEEEEEeCCCeEEEEEE
Q 047922 81 LDGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHSTD-GEEGFPGDLDVTVSYSLTSEKELSVKMK 159 (478)
Q Consensus 81 ~~G~~y~L~~N~~~n~lHG~~~g~~~~~w~v~~~~~~~~~~~v~l~~~~~~-~~~gyP~~~~~~v~y~L~~~~~l~i~~~ 159 (478)
++|++|+|+ +||+++ ++.|++..... ++..+|+|++.+++ +.++|||+++++++|+|+ +++|.|+|+
T Consensus 81 ~~g~~y~l~-------~HGf~r---~~~W~~~~~~~-~~~~~v~l~l~~~~~~~~~~P~~~~~~~~y~L~-~~~L~i~~~ 148 (289)
T 3k25_A 81 HAGKSYRLK-------QHGFAR---DLPWEVIGQQT-QDNARLDLRLSHNDATLEAFPFAFELVFSYQLQ-GHSLRIEQR 148 (289)
T ss_dssp ETTEEEECC-------TTBSGG---GSCCEEEEEEC-SSSEEEEEEEECCHHHHTTSCSCEEEEEEEEEE-TTEEEEEEE
T ss_pred ECCEEeecC-------CCCCcc---cCCeEEEEecC-CCCcEEEEEEecChhHHhcCCceEEEEEEEEEe-CCEEEEEEE
Confidence 999999998 799988 89999987643 22458999999865 579999999999999998 589999999
Q ss_pred EEeC-CCceeEeccCCcccccCCCCCCCccCeEEEEeCceEEeeCCCCCCCCceeccCCCCCCCCCCeeecccccCCCCC
Q 047922 160 AKAR-NKATPVNLAQHSYWNLGGHSSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPGG 238 (478)
Q Consensus 160 ~~n~-~~~~p~nlg~HpyFnl~~~~~~~i~d~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g 238 (478)
++|. ++++||++|+|||||++. +.+++++.++..++..++ +...+..+ .++|+.
T Consensus 149 ~~N~~~~~~~~~~~~H~yF~~~~-----~~~~~~~~~~~~~~d~~~-----~~~~~~~~-~~~~~~-------------- 203 (289)
T 3k25_A 149 IANLGDQRMPFSLGFHPYFFCRE-----KLGITLAIPANDYLDQKT-----GDCHGYDG-QLNLTS-------------- 203 (289)
T ss_dssp EEECSSSCEEECCEECCEEECSC-----CTTCEEECSCSEEEETTT-----CCEEECCS-CCCTTS--------------
T ss_pred EEcCCCCcceeEEecCcEEccCC-----cceEEEEcCccccccccc-----CcccccCC-cccCCc--------------
Confidence 9998 999999999999999984 457778777766654321 11111111 122211
Q ss_pred cceeEEecCCCCcccceeEEEEEcCCCCeEEEEEecCCceEEEcCCceeeeeeEEEEEeeccCCcceeecccceeecCCC
Q 047922 239 YDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLAQHSYWNLGGH 318 (478)
Q Consensus 239 ~D~~f~l~~~~~~~~~~~~~~l~~~~sg~~L~v~~~~p~~q~yt~~~~~~~l~v~~~a~~~~~~~p~~~~~H~yfnl~g~ 318 (478)
T Consensus 204 -------------------------------------------------------------------------------- 203 (289)
T 3k25_A 204 -------------------------------------------------------------------------------- 203 (289)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCeeceEEEEeccceeccCCCCCcccceeccCCCCcccCCceeccccccCCCcccceeEEeccCCCcccceeEEEEEc
Q 047922 319 NSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHD 398 (478)
Q Consensus 319 ~~~~v~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~~~~~~~~~~~~~~a~l~~ 398 (478)
..+|++|.... ...++|.+
T Consensus 204 ------------------------------------------------------~~~D~~~~~~~-------~~~~~l~~ 222 (289)
T 3k25_A 204 ------------------------------------------------------PELDLAFTQIS-------QPRAHFID 222 (289)
T ss_dssp ------------------------------------------------------SEEEEEECCCS-------SSEEEEEE
T ss_pred ------------------------------------------------------hhhceEeecCC-------CCeEEEEE
Confidence 13444444210 12367888
Q ss_pred CCCCcEEEEEec--CCeeEEEeCCccccccCCCCeeeecceEEEEccCC-CCCCCCCCCCCCceecCCCEEEEEEEEEEE
Q 047922 399 KKSGRVMELLAD--QPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQA-FPDSVNHPNFPNTIVYPGEKYKHHMLYKFS 475 (478)
Q Consensus 399 ~~sg~~l~v~t~--~p~~qvyT~~~~~~~~~~~~~~~~~~~~i~~E~~~-~pda~n~~~~~~~~l~pg~~~~~~~~y~f~ 475 (478)
+.++++|+|.++ +|.+|||++. .+..||||||+ +|||+|.+. +.++|+|||.++....+++.
T Consensus 223 ~~~~~~i~v~~~~~~~~~vvw~~~--------------~~~fvCvEP~~~~~da~n~~~-~~~~L~PGe~~~~~~~i~v~ 287 (289)
T 3k25_A 223 PDRNLKIEVSFSELYQTLVLWTVA--------------GKDYLCLEPWSGPRNALNSGE-QLAWVEPYSSRSAWVNFQVS 287 (289)
T ss_dssp TTTTEEEEEEECTTCCEEEEEEES--------------SSCEEEEEEESSCTTHHHHCT-TCEEECTTEEEEEEEEEEEE
T ss_pred CCCCCEEEEEeCCCCcEEEEEecC--------------CCCEEEEccccCCCCcccCCC-CcEEECCCCeEEEEEEEEEE
Confidence 999999999986 5899999975 25799999999 999999875 78999999999998888765
Q ss_pred e
Q 047922 476 T 476 (478)
Q Consensus 476 ~ 476 (478)
.
T Consensus 288 ~ 288 (289)
T 3k25_A 288 T 288 (289)
T ss_dssp C
T ss_pred e
Confidence 3
No 14
>2cir_A Hexose-6-phosphate mutarotase; hypothetical protein, isomerase; HET: BG6; 1.60A {Saccharomyces cerevisiae} PDB: 2ciq_A* 2cis_A*
Probab=100.00 E-value=2.4e-37 Score=307.83 Aligned_cols=149 Identities=19% Similarity=0.238 Sum_probs=124.9
Q ss_pred EEEEEEEeCC-E--EEEEeccCceEEEEEeeCCCCceeeEEecCCChhhcccCCCccc--ceeecCCCccCCcEEEECCE
Q 047922 10 VKFYELKKGD-F--SVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFG--SVVGRVANRIGGAQFTLDGT 84 (478)
Q Consensus 10 ~~~~~L~n~~-~--~v~v~~~Ga~i~~l~~~d~~G~~~dvv~g~~~~~~y~~~~~~~G--~~lgp~anRI~~g~~~~~G~ 84 (478)
+..|+|+|+. + +++|+++||+|+||++ +| +|+|++. +.+.|.....++| +++|||+|||++|+ +
T Consensus 7 ~~~~~L~n~~~~~~~~~i~~~Ga~l~s~~~---~G--~~vl~~~-~~~~~~~~~~~~GGip~l~P~~gr~~~~~-----~ 75 (297)
T 2cir_A 7 DKEVVLTHPADETTSVHILKYGATVYSWKL---KS--EEQLWLS-TAAKLDGSKPVRGGIPLVFPVFGKNSTDE-----H 75 (297)
T ss_dssp SSEEEEEETTEEEEEEEEETBTTEEEEEEE---TT--EECBCBC-TTCCCSSSSCCSBSBCEEBSCSSCCSSST-----T
T ss_pred CCEEEEeCCCCceeEEEEECCCcEEEEEEe---CC--eEEEecC-cHHHhcCCCCccCCCCEEEEecCCCCCCc-----c
Confidence 4589999976 6 8999999999999998 36 4888755 6777887777888 99999999999875 4
Q ss_pred EEEeecCCCCCCCCCCCCCCCccceEEEEEecCCCCCEEEEEEEe----CCCCCCCCceeEEEEEEEEeCCCeEEEEEEE
Q 047922 85 HYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHS----TDGEEGFPGDLDVTVSYSLTSEKELSVKMKA 160 (478)
Q Consensus 85 ~y~L~~N~~~n~lHG~~~g~~~~~w~v~~~~~~~~~~~v~l~~~~----~~~~~gyP~~~~~~v~y~L~~~~~l~i~~~~ 160 (478)
.|+| .+||+++ ++.|+++....+ +..+|+|++.+ ++++++|||+++++++|+|+ +++|+|+|++
T Consensus 76 ~y~l-------~~HGfar---~~~W~v~~~~~~-~~~~v~l~l~s~~~~~~~~~g~P~~~~~~vty~L~-~~~L~i~~~~ 143 (297)
T 2cir_A 76 LSKL-------PQHGLAR---NSTWEFLGQTKE-NPPTVQFGLKPEIANPELTKLWPMDYLLILTVELG-SDYLKTAIEV 143 (297)
T ss_dssp GGGS-------CTTBSGG---GSBCEEEEEEEE-TTEEEEEEECGGGSCHHHHHHSCCCCEEEEEEEEC-SSEEEEEEEE
T ss_pred cCCC-------CCccccC---CCceEEEeeccC-CceEEEEEecCCCCCHHHHhhCCCcEEEEEEEEEc-CCEEEEEEEE
Confidence 4555 4899987 899999876421 12479999988 56789999999999999998 4899999999
Q ss_pred EeC--CCceeEeccCCcccccCC
Q 047922 161 KAR--NKATPVNLAQHSYWNLGG 181 (478)
Q Consensus 161 ~n~--~~~~p~nlg~HpyFnl~~ 181 (478)
+|. +++||||+|+||||||++
T Consensus 144 ~N~~~d~~~~~~~~~H~YFnl~~ 166 (297)
T 2cir_A 144 ENTSSSKELKFNWLFHTYFRIED 166 (297)
T ss_dssp ECCCSSCCEEEEEEECCEEECSC
T ss_pred EcCCCCcceEEeeecCceEeCCC
Confidence 985 689999999999999975
No 15
>1jov_A HI1317; hypothetical protein, structure 2 function project, S2F, structural genomics, unknown function; 1.57A {Haemophilus influenzae} SCOP: b.30.5.7
Probab=99.83 E-value=3.5e-19 Score=174.29 Aligned_cols=147 Identities=20% Similarity=0.257 Sum_probs=104.9
Q ss_pred EEEEEEEEeCCEEEEEeccCceEEEEEeeCCCCceeeEEecCCChhhcccCCCccc--ceeecCCCccCCcEEEECCEEE
Q 047922 9 EVKFYELKKGDFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFG--SVVGRVANRIGGAQFTLDGTHY 86 (478)
Q Consensus 9 ~~~~~~L~n~~~~v~v~~~Ga~i~~l~~~d~~G~~~dvv~g~~~~~~y~~~~~~~G--~~lgp~anRI~~g~~~~~G~~y 86 (478)
.+..++|+|+..+++|..+||.|.||+..+ +| ++++|- .+.+.+.......| ++++||+||++
T Consensus 20 ~~~~~~l~~~~~~a~i~~~Ga~l~s~~~~~-~g--~e~Lw~-~~~~~~~~~~~irGGiPvlfP~~gr~~----------- 84 (270)
T 1jov_A 20 DIPVLHLKHAVGTAKISLQGAQLISWKPQN-AK--QDVLWL-SEVEPFKNGNAIRGGVPICYPWFGGVK----------- 84 (270)
T ss_dssp TEEEEEEEETTEEEEEETBTTEEEEEEETT-CS--SCSBCB-CTTCCCCTTSCCSBSCCEEBSSCGGGS-----------
T ss_pred CceEEEEeCCCcEEEEECCCCEEEEEEECC-CC--ceEEEE-CcHHhcCCCCCccCccEEEEeccCCCC-----------
Confidence 356789999999999999999999999742 24 687763 34444444444555 58999999986
Q ss_pred EeecCCCCCCCCCCCCCCCccceEEEEEecCCCCCEEEEEEEeCCCCCCCCceeEEEEEEEEeCCCeEEEEEEEEeCCCc
Q 047922 87 KLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHSTDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKARNKA 166 (478)
Q Consensus 87 ~L~~N~~~n~lHG~~~g~~~~~w~v~~~~~~~~~~~v~l~~~~~~~~~gyP~~~~~~v~y~L~~~~~l~i~~~~~n~~~~ 166 (478)
+++||+++ ++.|++.....+++...|+|++.+.+ + .|+++++|+|. |.++++++|. ..
T Consensus 85 --------~~~HGfaR---~~~W~v~~~~~~~~~v~l~~~l~~~~----~--~f~l~~~~~L~----l~~~~~v~N~-g~ 142 (270)
T 1jov_A 85 --------QPAHGTAR---IRLWQLSHYYISVHKVRLEFELFSDL----N--IIEAKVSMVFT----DKCHLTFTHY-GE 142 (270)
T ss_dssp --------SSTTBSGG---GSBCEEEEEEEETTEEEEEEEEECTT----S--CEEEEEEEEES----SSEEEEEEEC-CS
T ss_pred --------CCCCceec---CCCcEEeeeccCCCcEEEEEEECCCc----c--ccEEEEEEEEC----CeEEEEEEeC-Cc
Confidence 35899999 99999998753222224455554421 3 47778889994 7788888995 34
Q ss_pred eeEeccCCcccccCCCCCCCccCeEEEEeCc
Q 047922 167 TPVNLAQHSYWNLGGHSSGDILSQEVQIFAS 197 (478)
Q Consensus 167 ~p~nlg~HpyFnl~~~~~~~i~d~~L~i~a~ 197 (478)
.||++|+||||+++. +.+..++....
T Consensus 143 ~p~~~g~HpyF~v~d-----~~~~~v~g~~~ 168 (270)
T 1jov_A 143 ESAQAALHTYFNIGD-----INQVEVQGLPE 168 (270)
T ss_dssp SCEEEEECCEEECSC-----GGGEEEESCCS
T ss_pred hhHhhhcccceecCC-----cceEEEECCCC
Confidence 589999999999974 34555544433
No 16
>3imh_A Galactose-1-epimerase; structural genomics, PSI-2, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.76A {Lactobacillus acidophilus}
Probab=99.74 E-value=8.8e-19 Score=176.07 Aligned_cols=77 Identities=31% Similarity=0.537 Sum_probs=73.0
Q ss_pred eeeeEEEEEeeccCCcceeecccceeecCCCCCCCeeceEEEEeccceeccCCCCCcccceeccCCCCcccCCceecccc
Q 047922 288 EELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSS 367 (478)
Q Consensus 288 ~~l~v~~~a~~~~~~~p~~~~~H~yfnl~g~~~~~v~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~ 367 (478)
..|+|+|+|+ ++++||+|+||||||||+| ++++|+|+|+|++++++|+++||||++.+|++|+||||.++.||+.
T Consensus 154 ~~L~i~~~a~-~d~~tp~nlg~HpYFnL~g----~i~~~~L~i~a~~~~~~d~~~iPTG~~~~v~gt~~DFr~~~~ig~~ 228 (338)
T 3imh_A 154 NNLHYLLEAV-SDKLTIFNPVNHTYFNLGE----RAEDLNLQMNADYYLPVDEAGLPDRGMAEVAGTAFDFRKTKRIGDA 228 (338)
T ss_dssp SEEEEEEEEE-ESSSEECBCEECCEECTTS----CGGGCEEEECEEEECCBCTTSSBSSCCEECTTSTTCCSSCEEHHHH
T ss_pred CeEEEEEEEe-cCCCeEEEEeeCCEEeCCC----CcCCeEEEEEcCcEEEeCCccCCcCceecCCCCcccCCCCeEcchh
Confidence 3699999999 8999999999999999987 6999999999999999999999999999999999999999999997
Q ss_pred cc
Q 047922 368 ID 369 (478)
Q Consensus 368 ~~ 369 (478)
+.
T Consensus 229 ~~ 230 (338)
T 3imh_A 229 LN 230 (338)
T ss_dssp HT
T ss_pred hh
Confidence 54
No 17
>1nsx_A Galactose mutarotase; epimerase, galactose metabolism, isomerase; HET: GAL; 1.75A {Lactococcus lactis} SCOP: b.30.5.4 PDB: 1nsz_A* 1mmu_A* 1l7k_A* 1l7j_A* 1mmx_A* 1mmy_A* 1mmz_A* 1mn0_A* 1ns0_A* 1ns4_A* 1ns8_A* 1nsr_A* 1nsu_A* 1nsv_A* 1ns7_A* 1ns2_A* 1nsm_A* 1nss_A*
Probab=99.71 E-value=6.6e-18 Score=170.95 Aligned_cols=80 Identities=26% Similarity=0.454 Sum_probs=75.9
Q ss_pred eeeeEEEEEeeccCCcceeecccceeecCCCCCCCeeceEEEEeccceeccCCCC-CcccceeccCCCCcccCCceeccc
Q 047922 288 EELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQL-IPTGKIETVEGTPYDFLQPHAIGS 366 (478)
Q Consensus 288 ~~l~v~~~a~~~~~~~p~~~~~H~yfnl~g~~~~~v~~~~l~~~a~~~~~~d~~~-iPtG~~~~v~~t~~Df~~~~~i~~ 366 (478)
.+|+|+|+|+ ++++||+|+|+||||||+|..+++|++|+|+++|++++++|+++ ||||++.+|++|+|||+.++.|++
T Consensus 149 ~~L~i~~~a~-~d~~tp~nlg~HpYFnl~g~~~~~i~~~~L~i~a~~~~~~d~~~~iPtG~~~~v~gt~~df~~~~~l~~ 227 (347)
T 1nsx_A 149 NKWKIHYEAI-SDKDTVFNPTGNVYFNLNGDASESVENHGLRLAASRFVPLKDQTEIVRGDIVDIKNTDLDFRQEKQLSN 227 (347)
T ss_dssp SEEEEEEEEE-ESSCEECBCEECCEECTTSSTTSCGGGSEEEECEEEECCBCSTTCCBCSCCEECTTSTTCCSSCEEHHH
T ss_pred CeEEEEEEEE-cCCCeEEeeeccceEecCCCCCCceeceEEEEECCeEEEECCCCcCcCCCeEecCCCcccccCCcccch
Confidence 5899999999 89999999999999999988777899999999999999999999 999999999999999999999998
Q ss_pred cc
Q 047922 367 SI 368 (478)
Q Consensus 367 ~~ 368 (478)
.+
T Consensus 228 ~~ 229 (347)
T 1nsx_A 228 AF 229 (347)
T ss_dssp HH
T ss_pred hh
Confidence 74
No 18
>1snz_A Aldose 1-epimerase; mutarotase, galactosemia, isomerase; 2.20A {Homo sapiens} SCOP: b.30.5.4 PDB: 1so0_A*
Probab=99.64 E-value=1.4e-16 Score=161.11 Aligned_cols=80 Identities=48% Similarity=0.813 Sum_probs=75.4
Q ss_pred eeeeEEEEEeeccCCcceeecccceeecCCCCCCCeeceEEEEeccceeccCCCCCcccceeccCCCCcccCCceecccc
Q 047922 288 EELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSS 367 (478)
Q Consensus 288 ~~l~v~~~a~~~~~~~p~~~~~H~yfnl~g~~~~~v~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~ 367 (478)
.+|+|+|+|+| ++++|+|+|+||||||+|..+++|++|+|+++|++++++|+++||||++.+|++++|||+.++.|++.
T Consensus 157 ~~L~i~~~a~~-d~~~p~~~~~H~YFnl~~~~~~~i~~~~L~i~a~~~~~~d~~~iPtg~~~~v~~t~~df~~~~~l~~~ 235 (344)
T 1snz_A 157 GELIVNYRAQA-SQATPVNLTNHSYFNLAGQASPNINDHEVTIEADTYLPVDETLIPTGEVAPVQGTAFDLRKPVELGKH 235 (344)
T ss_dssp TEEEEEEEEEE-SSCEECBCEECCCBCTTCTTCSCCTTCEEEECEEEECCBCTTSCBCSCCEECTTSTTCCSSCEEHHHH
T ss_pred CEEEEEEEEEe-CCceEEeccccceEecCCCCCCcccCEEEEEECCeEEEeCCCCcccCceecCCCCcccccCCcCcChh
Confidence 38999999997 99999999999999999877778999999999999999999999999999999999999999999986
Q ss_pred c
Q 047922 368 I 368 (478)
Q Consensus 368 ~ 368 (478)
+
T Consensus 236 ~ 236 (344)
T 1snz_A 236 L 236 (344)
T ss_dssp H
T ss_pred h
Confidence 3
No 19
>1lur_A Aldose 1-epimerase; vitamin B12, methyltransferase, structural genomics, structure-based function assignment, decarboxylase, PSI; 1.85A {Caenorhabditis elegans} SCOP: b.30.5.4
Probab=99.63 E-value=2.3e-16 Score=159.23 Aligned_cols=78 Identities=28% Similarity=0.517 Sum_probs=73.1
Q ss_pred eeeeEEEEEeeccCCcceeecccceeecCCCCCCCeeceEEEEeccceeccCCCCCcccceeccCCCCcccCCceecccc
Q 047922 288 EELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSS 367 (478)
Q Consensus 288 ~~l~v~~~a~~~~~~~p~~~~~H~yfnl~g~~~~~v~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~ 367 (478)
.+|+|+|+|+ ++++||+|+|+||||||+|. .+|++|+|+++|++++++|+++||||++.+|++++|||+.++.|++.
T Consensus 151 ~~L~i~~~a~-~d~~tp~~lg~HpYFnl~~~--~~i~~~~L~i~a~~~~~~d~~~iPtg~~~~v~~t~~Df~~~~~l~~~ 227 (339)
T 1lur_A 151 NQLIIEHHAT-CDTPGLLALTNHAYWNLDGS--DTVAEHFLEMEADEFVEVDDTFCPTGAIRSVTDTGFDFRSGKQLKES 227 (339)
T ss_dssp SEEEEEEEEE-CSSCEECBCEECCEECSSCC--SCSTTCEEEECEEEEEEECTTSCEEEEEEECTTSTTCCTTCEETTCS
T ss_pred CeEEEEEEEe-CCCCeEEeeeccceEECCCC--CcccCEEEEEECCEEEEeCCCCccCCCEEccCCCcccccCceecCch
Confidence 5899999994 79999999999999999986 37999999999999999999999999999999999999999999997
Q ss_pred c
Q 047922 368 I 368 (478)
Q Consensus 368 ~ 368 (478)
+
T Consensus 228 ~ 228 (339)
T 1lur_A 228 G 228 (339)
T ss_dssp C
T ss_pred h
Confidence 4
No 20
>3ty1_A Hypothetical aldose 1-epimerase; supersandwich, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.90A {Klebsiella pneumoniae subsp}
Probab=99.63 E-value=2.1e-14 Score=146.92 Aligned_cols=168 Identities=12% Similarity=0.041 Sum_probs=111.5
Q ss_pred EEEEEEEEeC-CEEEEEec-cCceEEEEEeeCCCCceeeEEe-----cCCChhhcc-----cCC--CcccceeecCCCcc
Q 047922 9 EVKFYELKKG-DFSVKFTN-WGATIVSVFLPDKDGKVDDVVL-----GYDSVDDYK-----NDT--TYFGSVVGRVANRI 74 (478)
Q Consensus 9 ~~~~~~L~n~-~~~v~v~~-~Ga~i~~l~~~d~~G~~~dvv~-----g~~~~~~y~-----~~~--~~~G~~lgp~anRI 74 (478)
.+..++|+|+ +++++|++ .|+.|.++.. +| +++.| ++..+..|. ... ..|+.. .+.||=.
T Consensus 47 G~~~l~i~ng~gl~~~VlP~rG~dI~~~~~---~g--~~l~w~s~~~~~~~P~~~~~~~~~g~~~l~~f~g~-~~~cGl~ 120 (384)
T 3ty1_A 47 GSKILTIHSKDGLTITLSPTRGMNLLRIEG---FG--SRMGWDSPVKEVVNPAFINLESRNGLGWLEGFNEM-MVRCGYE 120 (384)
T ss_dssp TCEEEEEEESSSCEEEEEGGGTTEEEEEEE---TT--EEECCCCSCCSCCCGGGCCTTHHHHTGGGGTCCCS-EEEEEES
T ss_pred CeEEEEEECCCccEEEEecccCCcceeEEE---CC--EEeeecCCcccCcCccccccccCCCCchhhcCCee-EeeccCc
Confidence 4677899998 89999965 9999999998 46 56543 122222221 000 011111 1112211
Q ss_pred CCcE-EEECCEEEEeecCCCCCCCCCCCCCCCccc-----eEEEEEecCCCCCEEEEEEEeCC-CCCCCCceeEEEEEEE
Q 047922 75 GGAQ-FTLDGTHYKLVANEKSNMLHGGPKGFSDVI-----WKVKTYENEGPTPKIVFSYHSTD-GEEGFPGDLDVTVSYS 147 (478)
Q Consensus 75 ~~g~-~~~~G~~y~L~~N~~~n~lHG~~~g~~~~~-----w~v~~~~~~~~~~~v~l~~~~~~-~~~gyP~~~~~~v~y~ 147 (478)
..|. -..+|+.| .+||.++ ... |++.. .....|+++..... ...|||+.++.+|+|+
T Consensus 121 ~~G~P~~~~G~~~---------~LHG~~~---~~pa~~~~~~~~~----~~~~~i~l~g~~~~~~~~G~~~~l~~~i~~~ 184 (384)
T 3ty1_A 121 WTGHPVTADGQIY---------TLHGKAG---NTPASLVEVEVAD----SAPYEIRIRGLVKESTFKKADLQTLTELRYV 184 (384)
T ss_dssp CCSSCEEETTEEE---------CTTCSGG---GSCCSEEEEEEES----STTCCEEEEEEEEEEETTTEEEEEEEEEEEC
T ss_pred ccCCCCCcCCccc---------ccccccc---CCCcceeEEEecC----CCceEEEEEEEEEEeeeccCCEEEEEEEEEE
Confidence 1111 13566665 4799987 566 54432 12356777776654 5779999999999999
Q ss_pred EeCCCeEEEEEEEEeC-CCceeEeccCCcccccCCCCCCCccCeEEEEeCceEEeeC
Q 047922 148 LTSEKELSVKMKAKAR-NKATPVNLAQHSYWNLGGHSSGDILSQEVQIFASSYTPVD 203 (478)
Q Consensus 148 L~~~~~l~i~~~~~n~-~~~~p~nlg~HpyFnl~~~~~~~i~d~~L~i~a~~~~~~d 203 (478)
+. ++.|.|.++++|. ++++||.++.||||..+-. ..+.+|.+++.+.++.+
T Consensus 185 l~-~~~l~i~~~VtN~g~~p~P~~~~~H~nfg~Pll----~~g~rl~~p~~~~~p~~ 236 (384)
T 3ty1_A 185 PG-SNSFSLHDVLTNHADYPHDYQIIYHSNFGTPIL----EEGARFLAPISSISPFN 236 (384)
T ss_dssp TT-CSEEEEEEEEEECSSSCEEEEEEEEEEECTTTC----CTTCEEECCEEEEEESS
T ss_pred eC-CCEEEEEEEEEECCCCCCchheecccccCCCcc----CCCcEEEeccceecccc
Confidence 97 6899999999999 9999999999999986531 23678888887765543
No 21
>1yga_A Hypothetical 37.9 kDa protein in BIO3-HXT17 intergenic region; aldose_1_epimerase, sugar metabolism, predicted, structural genomics; 2.00A {Saccharomyces cerevisiae}
Probab=99.59 E-value=1e-15 Score=154.70 Aligned_cols=92 Identities=27% Similarity=0.487 Sum_probs=84.1
Q ss_pred eeeeEEEEEee-ccCCcceeecccceeecCCCC-CCCeeceEEEEeccceeccCCCC-CcccceeccCCCCcccCCceec
Q 047922 288 EELSVKMKAKA-RNKATPVNLAQHSYWNLGGHN-SGDILSQEVQIFASSYTPVDDQL-IPTGKIETVEGTPYDFLQPHAI 364 (478)
Q Consensus 288 ~~l~v~~~a~~-~~~~~p~~~~~H~yfnl~g~~-~~~v~~~~l~~~a~~~~~~d~~~-iPtG~~~~v~~t~~Df~~~~~i 364 (478)
.+|+|+|+|+| +++++|||+|+||||||+|.. .++|++|+|++++++++++|+++ ||||++.+|++++|||+.++.|
T Consensus 153 ~~L~i~~~~~N~~d~~~p~~~~~H~YFnl~~~~~~~~i~~~~l~l~a~~~~~~d~~~~iPtg~~~~v~~~~~df~~~~~l 232 (342)
T 1yga_A 153 MTLDMEYQAQLVRGDATPINMTNHSYFNLNKVKSEKSIRGTEVKVCSNKSLEVTEGALLPTGKIIERNIATFDSTKPTVL 232 (342)
T ss_dssp TEEEEEEEEEEEESSEEECBCEECCCBCTTTTTCTTCCTTEEEEESCCEEEEECTTTCCEEEEEEECSCCBTTCSSCEEE
T ss_pred CEEEEEEEEEeCCCCceEEeeeccceEEcCCCCCCCcccceEEEEeCCeEEEECCCCCCcCCCeEecCCCcccccCCeec
Confidence 58999999999 899999999999999999864 45799999999999999999988 9999999999999999999999
Q ss_pred cccccCCCcccceeEEecc
Q 047922 365 GSSIDKLPVGYDINYVLDK 383 (478)
Q Consensus 365 ~~~~~~~~~g~D~~f~~~~ 383 (478)
++.+. +|||||++..
T Consensus 233 ~~~~~----~~D~~f~~~~ 247 (342)
T 1yga_A 233 HEDTP----VFDCTFIIDA 247 (342)
T ss_dssp CSSCC----CCEEEEECTT
T ss_pred CcccC----CCCcEEEeCC
Confidence 98653 7999999853
No 22
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=99.59 E-value=9.2e-16 Score=169.14 Aligned_cols=91 Identities=31% Similarity=0.516 Sum_probs=84.7
Q ss_pred eeeeEEEEEee-ccCCcceeecccceeecCCCCCCCeeceEEEEeccceeccCCCCCcccceeccCCCCcccCCceeccc
Q 047922 288 EELSVKMKAKA-RNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGS 366 (478)
Q Consensus 288 ~~l~v~~~a~~-~~~~~p~~~~~H~yfnl~g~~~~~v~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~ 366 (478)
.+|+|+|+|+| ++++||+|+||||||||+|...++|++|+|++++++++++|+++||||++.+|++|+|||+.++.|+.
T Consensus 514 ~~L~i~~~~~n~~~~~~p~~~~~H~yFnl~~~~~~~~~~~~l~~~a~~~~~~d~~~iptg~~~~v~~t~~df~~~~~l~~ 593 (699)
T 1z45_A 514 KSLEIVYKGKLTAGEATPINLTNHSYFNLNKPYGDTIEGTEIMVRSKKSVDVDKNMIPTGNIVDREIATFNSTKPTVLGP 593 (699)
T ss_dssp TEEEEEEEEEEEESSEEECBCEECCEECTTTTSCSSSTTEEEEESCCEEEEECTTSCEEEEEEECSCCBTTSSSCEEECS
T ss_pred CEEEEEEEEEecCCCCceecccccceEeecCCCCCCccccEEEEecCeEEecCCCCCCCCCcccCcCCCcccCCcccccc
Confidence 57999999999 68999999999999999987667899999999999999999999999999999999999999999998
Q ss_pred cccCCCcccceeEEec
Q 047922 367 SIDKLPVGYDINYVLD 382 (478)
Q Consensus 367 ~~~~~~~g~D~~f~~~ 382 (478)
.. .+|||||++.
T Consensus 594 ~~----~~~D~~~~~~ 605 (699)
T 1z45_A 594 KN----PQFDCCFVVD 605 (699)
T ss_dssp SC----CCCEEEEESC
T ss_pred cC----CCCCcceEcc
Confidence 64 4899999985
No 23
>3nre_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.59A {Escherichia coli}
Probab=99.55 E-value=3.4e-15 Score=147.45 Aligned_cols=73 Identities=22% Similarity=0.292 Sum_probs=67.8
Q ss_pred eeeeeEEEEEee-ccCCcceeecccceeecCCCCCCCeeceEEEEeccceeccCCCCCcccceeccCCCCcccCCceecc
Q 047922 287 KEELSVKMKAKA-RNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIG 365 (478)
Q Consensus 287 ~~~l~v~~~a~~-~~~~~p~~~~~H~yfnl~g~~~~~v~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~ 365 (478)
+.+|+|+|+|+| +++++|+|+|+|+||||+| +|+|+|+|++++++|+++||||+.. |+++++||+.++.|+
T Consensus 125 ~~~L~i~~~~~N~~~~~~~~~~~~H~YFnl~~-------~~~l~i~a~~~~~~d~~~iPtg~~~-v~~t~~df~~~~~l~ 196 (291)
T 3nre_A 125 ADTLTVTLSVTNQGAETLPFGTGWHPYFPLSP-------QTRIQAQASGYWLEREQWLAGEFCE-QLPQELDFNQPAPLP 196 (291)
T ss_dssp SSEEEEEEEEEECSSSCEEECCEEEEEEECCT-------TCEEEECCSEEEEECGGGCEEEEES-SCCGGGCCSSCEECC
T ss_pred CCeEEEEEEEEECCCCCccceEEcCccEecCC-------CeEEEEECCEEEEcCCCcCCCcccc-CCCCcccccCCcCCC
Confidence 468999999999 8999999999999999975 6899999999999999999999984 789999999999999
Q ss_pred cc
Q 047922 366 SS 367 (478)
Q Consensus 366 ~~ 367 (478)
+.
T Consensus 197 ~~ 198 (291)
T 3nre_A 197 RQ 198 (291)
T ss_dssp SS
T ss_pred Cc
Confidence 85
No 24
>3mwx_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.45A {Bacillus subtilis}
Probab=99.34 E-value=3e-13 Score=135.70 Aligned_cols=80 Identities=18% Similarity=0.192 Sum_probs=71.6
Q ss_pred eeeeEEEEEee-ccCCcceeecccceeecCCCCCCCeeceEEEEeccceeccCCCCCcccceeccCCCCcccCCceeccc
Q 047922 288 EELSVKMKAKA-RNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGS 366 (478)
Q Consensus 288 ~~l~v~~~a~~-~~~~~p~~~~~H~yfnl~g~~~~~v~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~ 366 (478)
.+|+|+|+++| +++++|+|+|+||||||+ +++|+|+++|++++++|+++||||++.+| ++.+||+.++.+..
T Consensus 155 ~~L~i~~~~~N~~~~~~~~~~~~H~yFnl~------~~~~~l~~~a~~~~~~d~~~iptg~~~~~-~~~~~~~~~~~~~~ 227 (326)
T 3mwx_A 155 NTLFKHATVMNKGKEAFPWGIGYHTTFIFP------AESSLFSLTADQQWELDERLLPTGKLMDV-PYKEALHEGMDLRH 227 (326)
T ss_dssp TEEEEEEEEEECSSSCEEECCEECCCEECC------TTTEEEEESEEEEEEECTTSCEEEEEEEC-TTHHHHHHCBCCTT
T ss_pred CcEEEEEEEEECCCCceeeEEeeccccCCC------CCCEEEEEECCcEEEeCCccCCCCccccC-cchhhcccCcccCC
Confidence 57999999999 899999999999999996 78999999999999999999999999998 88999987665433
Q ss_pred cccCCCcccceeEE
Q 047922 367 SIDKLPVGYDINYV 380 (478)
Q Consensus 367 ~~~~~~~g~D~~f~ 380 (478)
.+|||+|+
T Consensus 228 ------~~~D~~f~ 235 (326)
T 3mwx_A 228 ------KQLDDVFL 235 (326)
T ss_dssp ------CCCEEEEE
T ss_pred ------ccccceee
Confidence 37899885
No 25
>3os7_A Galactose mutarotase-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: PG4 TLA; 1.80A {Clostridium acetobutylicum}
Probab=99.33 E-value=6.5e-13 Score=134.03 Aligned_cols=88 Identities=18% Similarity=0.242 Sum_probs=80.0
Q ss_pred eeeeEEEEEee-ccCCcceeecccceeecCCCCCCCeeceEEEEeccceeccCCCCCcccceeccCCCCcccCC-ceecc
Q 047922 288 EELSVKMKAKA-RNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQ-PHAIG 365 (478)
Q Consensus 288 ~~l~v~~~a~~-~~~~~p~~~~~H~yfnl~g~~~~~v~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~-~~~i~ 365 (478)
.+|+|+|+++| +++++|+|+|+||||||+|..++++++|+|++++++++++|+++||||++.+|+++++||+. ++.+.
T Consensus 162 ~~L~i~~~~~N~~~~~~p~~~~~H~yF~l~~~~~~~~~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~~~~df~~~~~~~~ 241 (341)
T 3os7_A 162 KGLKQTTSVVNLSSEEMPLSVGYHSAFNVPFIEGSEDSNCRVKISIDKFWKQDSRNLPTGESFAPTGEQKEYLENGVAVA 241 (341)
T ss_dssp TEEEEEEEEEECSSSCEEECCEECCEEESSCBTTCCGGGEEEEECEEEEEEECTTSCEEEEEECCCGGGGGGGTTCBCTT
T ss_pred CeEEEEEEEEeCCCCcEEEEEecCceeecCCCCCCCcccEEEEEeCCcEEecCcccCCCCccccCCCccchhhcCCcccC
Confidence 48999999999 79999999999999999998888899999999999999999999999999999999999997 44443
Q ss_pred ccccCCCcccceeEEe
Q 047922 366 SSIDKLPVGYDINYVL 381 (478)
Q Consensus 366 ~~~~~~~~g~D~~f~~ 381 (478)
. .+|||||+.
T Consensus 242 ~------~~~D~~f~~ 251 (341)
T 3os7_A 242 S------HPIESLFSL 251 (341)
T ss_dssp S------SCCEEEEEE
T ss_pred C------cchhhhccc
Confidence 3 389999986
No 26
>3q1n_A Galactose mutarotase related enzyme; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.61A {Lactobacillus casei}
Probab=99.07 E-value=1.2e-10 Score=114.90 Aligned_cols=62 Identities=18% Similarity=0.262 Sum_probs=57.6
Q ss_pred eeeeeEEEEEee-ccCCcceeecccceeecCCCCCCCeeceEEEEeccc----eeccCCCCCcccce
Q 047922 287 KEELSVKMKAKA-RNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASS----YTPVDDQLIPTGKI 348 (478)
Q Consensus 287 ~~~l~v~~~a~~-~~~~~p~~~~~H~yfnl~g~~~~~v~~~~l~~~a~~----~~~~d~~~iPtG~~ 348 (478)
+.+|+|+|+|+| +++++|+|+|+||||||++...+++++|+|+++++. ++++|++.||+|+.
T Consensus 119 ~~~L~i~~~~~N~~~~~~p~~~~~H~yFnl~~~~~~~~~d~~l~~~a~~~~~~~~~~~~~~l~~g~~ 185 (294)
T 3q1n_A 119 DGGLSVHYTVTNDDSKSMPFALGFHPAFNVGLKADGSFDDYDLTVEPLNSPLQRFGIGPVPFRNGDV 185 (294)
T ss_dssp TTEEEEEEEEEECSSSCEEECEEECCEEECCBCTTSSBCSCEEEEECCSSCCEEEEESSTTSEEEEE
T ss_pred CCEEEEEEEEEcCCCCceeeeEecCcEEEcCCCCCCcccCEEEEEcCCcccceEEeeCCCCcCCCcc
Confidence 458999999999 799999999999999999887788999999999999 99999999999974
No 27
>3dcd_A Galactose mutarotase related enzyme; Q5FKD7 LAR33 NESG X-RAY, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Lactobacillus acidophilus}
Probab=98.89 E-value=1.1e-09 Score=108.75 Aligned_cols=78 Identities=8% Similarity=-0.018 Sum_probs=63.4
Q ss_pred eeeeeEEEEEee-ccCCcceeecccceeecCCCCCCCeeceEEEEeccceeccCCCCCcccceeccC-CCCcccCCceec
Q 047922 287 KEELSVKMKAKA-RNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKIETVE-GTPYDFLQPHAI 364 (478)
Q Consensus 287 ~~~l~v~~~a~~-~~~~~p~~~~~H~yfnl~g~~~~~v~~~~l~~~a~~~~~~d~~~iPtG~~~~v~-~t~~Df~~~~~i 364 (478)
+.+|+|+|+++| +++++|+++|+|||||+++....++++|+|+++++..+. ...||+|. .++. .+.+||+....|
T Consensus 119 ~~~L~i~~~v~N~g~~~~p~~~g~HpyF~~~~~~~~~~~d~~L~~~a~~~~~--~~~l~~g~-~~~~~~~~~~~~~~~~l 195 (307)
T 3dcd_A 119 NNLLEENFSVVNKSDETMIFGVGGHPGFNLPTDHGENKEDFYFDMHPSVTRV--RIPLKDAS-LDWNNRSLAPTDSLIAL 195 (307)
T ss_dssp TTEEEEEEEEEECSSSCEEECEEECCEEECCCTTSCCGGGEEEEEESCCCEE--ECCEETTE-ECGGGCEEECTTSCEEC
T ss_pred CCEEEEEEEEECCCCCcEeEEEEcCcEEEcCCCCCCccccEEEEEcCCCcee--eeecCCcc-cccccccccccCCcccC
Confidence 468999999999 799999999999999999887788999999999998774 35678884 4443 355777777766
Q ss_pred ccc
Q 047922 365 GSS 367 (478)
Q Consensus 365 ~~~ 367 (478)
...
T Consensus 196 ~~~ 198 (307)
T 3dcd_A 196 SDD 198 (307)
T ss_dssp CSG
T ss_pred CHH
Confidence 654
No 28
>2hta_A Putative enzyme related to aldose 1-epimerase; carbohydrate, MU YEAD, GALM, sugar phosphate, isomerase; 1.90A {Salmonella typhimurium} PDB: 2htb_A
Probab=98.65 E-value=1.8e-08 Score=100.08 Aligned_cols=61 Identities=18% Similarity=0.276 Sum_probs=54.2
Q ss_pred eeeeeEEEEEeeccCCcceeecccceeecCCCCCCCeeceEEEEeccceeccCCCCCcccceeccCCCCcccC
Q 047922 287 KEELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFL 359 (478)
Q Consensus 287 ~~~l~v~~~a~~~~~~~p~~~~~H~yfnl~g~~~~~v~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~ 359 (478)
+.+|+|+|+|+| ++|+|+|+||||||++ +++++|++.++.++. .||+|+..++.++++||+
T Consensus 159 ~~~L~i~~~~~N---~~~~~~g~H~YFnl~~-----~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~df~ 219 (309)
T 2hta_A 159 GKTCEIELEAHG---EFATTSALHSYFNVGD-----IANVKVSGLGDRFID----KVNDAKEGVLTDGIQTFP 219 (309)
T ss_dssp SSSEEEEEEEES---SEEEEEEECCEEECSC-----GGGCEEECCCSEEEE----TTTTTEEEECSSSCEECS
T ss_pred CCceEEEEEEEC---CeEehhcCCceEecCC-----ccceEEECCCCceEe----ccCCcccccccCCceecC
Confidence 668999999998 9999999999999975 467899999877774 689999999999999997
No 29
>2cir_A Hexose-6-phosphate mutarotase; hypothetical protein, isomerase; HET: BG6; 1.60A {Saccharomyces cerevisiae} PDB: 2ciq_A* 2cis_A*
Probab=98.34 E-value=2.6e-07 Score=91.07 Aligned_cols=146 Identities=16% Similarity=0.200 Sum_probs=108.6
Q ss_pred eeeeeEEEEEee-c-cCCcceeecccceeecCCCCCCCeeceEEEEeccceeccCCCCCcccceeccCCC-CcccCCcee
Q 047922 287 KEELSVKMKAKA-R-NKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGT-PYDFLQPHA 363 (478)
Q Consensus 287 ~~~l~v~~~a~~-~-~~~~p~~~~~H~yfnl~g~~~~~v~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t-~~Df~~~~~ 363 (478)
+.+|+|+|+|+| + ++++|+|+|+||||||++. .+++|+| ++++ .+||+.++.
T Consensus 134 ~~~L~i~~~~~N~~~d~~~~~~~~~H~YFnl~~~---------------------~~~~~~g----v~~~~~~d~~~~~~ 188 (297)
T 2cir_A 134 SDYLKTAIEVENTSSSKELKFNWLFHTYFRIEDI---------------------EGTMVSN----LAGMKLYDQLLKES 188 (297)
T ss_dssp SSEEEEEEEEECCCSSCCEEEEEEECCEEECSCG---------------------GGEEEES----CTTCEEEETTTTEE
T ss_pred CCEEEEEEEEEcCCCCcceEEeeecCceEeCCCc---------------------cceEEec----CCCCccEeccCCcc
Confidence 368999999999 8 9999999999999999753 1267777 5565 678876666
Q ss_pred ccccc--cCCCcccceeEEeccCCCcccceeEEEEEcCCCCcEEEEEec-CCeeEEEeCCcccccc---CC-CCeeeecc
Q 047922 364 IGSSI--DKLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLAD-QPGVQYYTGGQIKEVR---GK-GGFVYKKH 436 (478)
Q Consensus 364 i~~~~--~~~~~g~D~~f~~~~~~~~~~~~~~a~l~~~~sg~~l~v~t~-~p~~qvyT~~~~~~~~---~~-~~~~~~~~ 436 (478)
+...- ..+..++||+|.... .+..|+|.++ +|+.|+|+++ +|++||||+ +++... +. .+..| +
T Consensus 189 ~~~~~~~~~~~~~~D~~~~~~~------~~~~~~l~~~-~g~~l~v~~~~~p~~~v~t~-~~~~~~~~~~~~~~~~~--~ 258 (297)
T 2cir_A 189 YVDKHPVVTFNQETDVIYQNVS------AERAIQIVDK-GVQIHTLKRYNLPDTVVWNP-WIEKSQGMADFEPKTGY--Q 258 (297)
T ss_dssp EECCSSSBCCSSCEEEEECCCC------TTCCEEEEET-TEEEEEEEEESCCEEEEEEC-HHHHHHHCTTCCSTTGG--G
T ss_pred ccccCCccccCCccceEEeCCC------CCccEEEEcC-CCCEEEEEecCCCcEEEECc-chhhccccccCCCcccc--c
Confidence 55421 123358999996421 0235789899 9999999998 499999997 543211 11 12222 4
Q ss_pred eEEEEccCCCCCCCCCCCCCCceecCCCEEEEEEEEEEE
Q 047922 437 AGLCLETQAFPDSVNHPNFPNTIVYPGEKYKHHMLYKFS 475 (478)
Q Consensus 437 ~~i~~E~~~~pda~n~~~~~~~~l~pg~~~~~~~~y~f~ 475 (478)
.+||||||.. ++.++|+|||+|+.+++|+|.
T Consensus 259 ~~vClEp~~~--------~~~~~L~pGe~~~~~~~~~~~ 289 (297)
T 2cir_A 259 QMICIEPGHV--------HDFISLAPGKKWNAYQLLCKE 289 (297)
T ss_dssp GEEEEEEEEE--------EEEEEECTTCEEEEEEEEECC
T ss_pred cEEEECceEC--------CCCEEECCCCeEEEEEEEEEE
Confidence 6999999984 578899999999999999985
No 30
>3k25_A SLR1438 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, SGR112, P73504_SYNY3; 2.55A {Synechocystis SP}
Probab=97.48 E-value=6.2e-05 Score=73.69 Aligned_cols=48 Identities=19% Similarity=0.293 Sum_probs=40.0
Q ss_pred eeeeeEEEEEee-ccCCcceeecccceeecCCCCCCCeeceEEEEeccceeccC
Q 047922 287 KEELSVKMKAKA-RNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVD 339 (478)
Q Consensus 287 ~~~l~v~~~a~~-~~~~~p~~~~~H~yfnl~g~~~~~v~~~~l~~~a~~~~~~d 339 (478)
+.+|+|+|+++| +++++|+++++|||||+++ +.+++++.++..++..+
T Consensus 140 ~~~L~i~~~~~N~~~~~~~~~~~~H~yF~~~~-----~~~~~~~~~~~~~~d~~ 188 (289)
T 3k25_A 140 GHSLRIEQRIANLGDQRMPFSLGFHPYFFCRE-----KLGITLAIPANDYLDQK 188 (289)
T ss_dssp TTEEEEEEEEEECSSSCEEECCEECCEEECSC-----CTTCEEECSCSEEEETT
T ss_pred CCEEEEEEEEEcCCCCcceeEEecCcEEccCC-----cceEEEEcCcccccccc
Confidence 458999999999 8999999999999999974 46788887777666544
No 31
>3ty1_A Hypothetical aldose 1-epimerase; supersandwich, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.90A {Klebsiella pneumoniae subsp}
Probab=89.71 E-value=0.22 Score=50.28 Aligned_cols=169 Identities=11% Similarity=0.110 Sum_probs=108.5
Q ss_pred cCCceEEEcCCce-----eeeeeEEEEEee-ccCCcceeecccceeecCCCCCCCeeceEEEEeccceeccCCCCCcccc
Q 047922 274 DQPGVQYYTGGQI-----KEELSVKMKAKA-RNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGK 347 (478)
Q Consensus 274 ~~p~~q~yt~~~~-----~~~l~v~~~a~~-~~~~~p~~~~~H~yfnl~g~~~~~v~~~~l~~~a~~~~~~d~~~iPtG~ 347 (478)
...++.+-....+ +.+|+|+++++| +++++|++++.|+||...= ..++++|.+++...++.|+.
T Consensus 169 ~~~G~~~~l~~~i~~~l~~~~l~i~~~VtN~g~~p~P~~~~~H~nfg~Pl----l~~g~rl~~p~~~~~p~~~~------ 238 (384)
T 3ty1_A 169 TFKKADLQTLTELRYVPGSNSFSLHDVLTNHADYPHDYQIIYHSNFGTPI----LEEGARFLAPISSISPFNDY------ 238 (384)
T ss_dssp ETTTEEEEEEEEEEECTTCSEEEEEEEEEECSSSCEEEEEEEEEEECTTT----CCTTCEEECCEEEEEESSGG------
T ss_pred eeccCCEEEEEEEEEEeCCCEEEEEEEEEECCCCCCchheecccccCCCc----cCCCcEEEeccceecccccc------
Confidence 3445554433333 458999999999 8999999999999996421 12478999888876655432
Q ss_pred eeccCCCCcccCCc-eeccccccCCCccc-ceeEEeccCCCcccceeEEEEEcCCCCcEEEE-Ee--cCCeeEEEeCCcc
Q 047922 348 IETVEGTPYDFLQP-HAIGSSIDKLPVGY-DINYVLDKDDSSKKMRKVAIVHDKKSGRVMEL-LA--DQPGVQYYTGGQI 422 (478)
Q Consensus 348 ~~~v~~t~~Df~~~-~~i~~~~~~~~~g~-D~~f~~~~~~~~~~~~~~a~l~~~~sg~~l~v-~t--~~p~~qvyT~~~~ 422 (478)
+.++ ..|++.. ++.. ++ +++|..+-..+. .....+.|.++..|+.+.+ |. ..|++++++...-
T Consensus 239 --~~~~-l~~~~~~~~p~~--------~~~E~vf~~d~~~d~-~G~~~~~l~n~~~g~~~~l~f~~~~fP~l~~W~~~~~ 306 (384)
T 3ty1_A 239 --AKSG-LKTWQTYQGPTK--------DFDEMVFNIQPLADE-NHQTLAAVVNKAGDKGASIQFDTRQLPVLTLWKNTDT 306 (384)
T ss_dssp --GGGG-STTTTBCCCCCT--------TCCCEEEEEEECCCT-TSEEEEEEECSSSSCEEEEEEETTTSCEEEEEEEESC
T ss_pred --cccc-ccchhhccCCCC--------CCCceEEEEeccccC-CCceEEEEEecCCCcEEEEEEchHHCCHhHhhcccCC
Confidence 0111 1133222 1111 22 456644321111 2245678988988988888 43 3799999988421
Q ss_pred ccccCCCCeeeecceEEEEccCC-CCCC---CCCCCCCCceecCCCEEEEEEEEEEE
Q 047922 423 KEVRGKGGFVYKKHAGLCLETQA-FPDS---VNHPNFPNTIVYPGEKYKHHMLYKFS 475 (478)
Q Consensus 423 ~~~~~~~~~~~~~~~~i~~E~~~-~pda---~n~~~~~~~~l~pg~~~~~~~~y~f~ 475 (478)
. ++.-.+||||++ +||+ .+... ..+.|+||++++....+.+.
T Consensus 307 ~----------~~gyvl~LEP~T~~p~~~~~~~~~g-~l~~L~PGes~~~~~~i~v~ 352 (384)
T 3ty1_A 307 V----------KQGYVTGIEPGTSYAYPVTIERKQK-RVKQLQPGASAQFDLTYTLL 352 (384)
T ss_dssp T----------TTCEEEEEEEESSCSSCHHHHHHTT-CCEEECTTCEEEEEEEEEEE
T ss_pred C----------CCccEEEEeCccCCCchhHHHHhCC-CeEEECCCCEEEEEEEEEEe
Confidence 1 122367999999 9998 44333 46799999999988888764
No 32
>3bs6_A Inner membrane protein OXAA; YIDC/OXA1/ALB3 family, membrane insertion, chaperone, SEC translocon, periplasmic domain, beta supersandwich fold; HET: PG4 PGE 2PE; 1.80A {Escherichia coli}
Probab=86.05 E-value=2.3 Score=40.68 Aligned_cols=27 Identities=19% Similarity=0.421 Sum_probs=24.9
Q ss_pred EEEEEEeCCEEEEEeccCceEEEEEee
Q 047922 11 KFYELKKGDFSVKFTNWGATIVSVFLP 37 (478)
Q Consensus 11 ~~~~L~n~~~~v~v~~~Ga~i~~l~~~ 37 (478)
..++|+|+.++++|.+.||.|.++.++
T Consensus 4 ~~i~v~td~l~~~is~~GG~I~~~~Lk 30 (280)
T 3bs6_A 4 KLISVKTDVLDLTINTRGGDVEQALLP 30 (280)
T ss_dssp CEEEEECSSCEEEEETBTTEEEEEEEE
T ss_pred CEEEEECCcEEEEEECCCCeEeeeEcC
Confidence 468999999999999999999999985
No 33
>3blc_A Inner membrane protein OXAA; YIDC, membrane assembly facilitator, chaperone, periplasmic inner membrane, transmembrane; 2.50A {Escherichia coli K12}
Probab=84.60 E-value=10 Score=36.99 Aligned_cols=27 Identities=19% Similarity=0.421 Sum_probs=24.9
Q ss_pred EEEEEEeCCEEEEEeccCceEEEEEee
Q 047922 11 KFYELKKGDFSVKFTNWGATIVSVFLP 37 (478)
Q Consensus 11 ~~~~L~n~~~~v~v~~~Ga~i~~l~~~ 37 (478)
..++|+|+.++++|.+.||.|.++.++
T Consensus 35 ~~i~V~td~l~~~is~~GG~I~~~~Lk 61 (330)
T 3blc_A 35 KLISVKTDVLDLTINTRGGDVEQALLP 61 (330)
T ss_dssp CEEEEECSSCEEEEETBTCCEEEEEEE
T ss_pred CEEEEECCcEEEEEECCCCEEeEEECC
Confidence 468999999999999999999999985
No 34
>1jov_A HI1317; hypothetical protein, structure 2 function project, S2F, structural genomics, unknown function; 1.57A {Haemophilus influenzae} SCOP: b.30.5.7
Probab=81.47 E-value=0.99 Score=43.06 Aligned_cols=135 Identities=20% Similarity=0.250 Sum_probs=84.0
Q ss_pred eeEEEEEeeccCCcceeecccceeecCCCCCCCeeceEEEEeccceeccCCCCCcccceeccCCCCcccCCceecccccc
Q 047922 290 LSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSSID 369 (478)
Q Consensus 290 l~v~~~a~~~~~~~p~~~~~H~yfnl~g~~~~~v~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~ 369 (478)
++++++.+|.+. .|+.++.||||+.+ ++++.+|+.....+ +| .+|.+.. ...+ ..+|
T Consensus 131 l~~~~~v~N~g~-~p~~~g~HpyF~v~-----d~~~~~v~g~~~~~--~d--~l~~~~~-~~~~-~~~~----------- 187 (270)
T 1jov_A 131 DKCHLTFTHYGE-ESAQAALHTYFNIG-----DINQVEVQGLPETC--FN--SLNQQQE-NVPS-PRHI----------- 187 (270)
T ss_dssp SSEEEEEEECCS-SCEEEEECCEEECS-----CGGGEEEESCCSEE--EE--TTTTEEE-ECCS-SBCC-----------
T ss_pred CeEEEEEEeCCc-hhHhhhcccceecC-----CcceEEEECCCCcc--ee--ccCCccc-ccCC-cccC-----------
Confidence 788889999443 48999999999985 35566666654443 33 2554332 1111 1111
Q ss_pred CCCcccceeEEeccCCCcccceeEEEEEcCCCCcEEEEEe-cCCeeEEEeCCccccccCCCCeeeecceEEEEccCCCCC
Q 047922 370 KLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLA-DQPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQAFPD 448 (478)
Q Consensus 370 ~~~~g~D~~f~~~~~~~~~~~~~~a~l~~~~sg~~l~v~t-~~p~~qvyT~~~~~~~~~~~~~~~~~~~~i~~E~~~~pd 448 (478)
....|..|.-. ...+.+.++..++.++|.. +.|.++|+++. -..+.+. ...+...-|||||...
T Consensus 188 --~~~~D~vy~~~--------~~~~~i~d~~~~~~i~v~~~~~~~~vvWnP~-~~~~~d~--~~~~~~~fvCvEp~~~-- 252 (270)
T 1jov_A 188 --SENVDCIYSAE--------NMQNQILDKSFNRTIALHHHNASQFVLWNPW-HKKTSGM--SETGYQKMLCLETARI-- 252 (270)
T ss_dssp --SSCEEEEEECS--------SSEEEEEETTTTEEEEEEEESCSEEEEEECT-TSCCTTC--CTTGGGGEEEEEEEEE--
T ss_pred --CCCccceeCCC--------CCCEEEEECCCCcEEEEEEcCCCeEEEECCC-ccccccc--ccccCccEEEeCcccc--
Confidence 23478887621 1235788899999999986 58999999963 1111000 0111356899998441
Q ss_pred CCCCCCCCCceecCCCEEEEEE
Q 047922 449 SVNHPNFPNTIVYPGEKYKHHM 470 (478)
Q Consensus 449 a~n~~~~~~~~l~pg~~~~~~~ 470 (478)
...|+|||.++.+.
T Consensus 253 --------~~~L~PGe~~~~~~ 266 (270)
T 1jov_A 253 --------HHLLEFGESLSVEI 266 (270)
T ss_dssp --------EEEECTTCEEEEEE
T ss_pred --------ceEECCCCEEEEEE
Confidence 35899999975554
Done!