Query 047931
Match_columns 339
No_of_seqs 161 out of 1570
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 07:42:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047931.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047931hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asc_A Kelch repeat and BTB do 99.4 3.5E-11 1.2E-15 105.6 22.4 187 113-317 68-283 (315)
2 3ii7_A Kelch-like protein 7; p 99.4 3.7E-11 1.3E-15 104.9 21.2 193 111-319 69-280 (306)
3 2woz_A Kelch repeat and BTB do 99.4 3.5E-11 1.2E-15 105.7 20.0 189 113-317 79-293 (318)
4 2xn4_A Kelch-like protein 2; s 99.4 3.8E-11 1.3E-15 104.7 19.7 193 112-318 77-283 (302)
5 1zgk_A Kelch-like ECH-associat 99.4 5.9E-11 2E-15 103.8 20.8 192 112-319 90-295 (308)
6 2vpj_A Kelch-like protein 12; 99.4 3.9E-11 1.3E-15 104.5 18.7 191 112-318 78-285 (301)
7 3ii7_A Kelch-like protein 7; p 99.3 1.4E-10 4.7E-15 101.3 19.9 192 111-318 23-232 (306)
8 2vpj_A Kelch-like protein 12; 99.3 2.7E-10 9.2E-15 99.1 20.7 192 111-318 30-238 (301)
9 2xn4_A Kelch-like protein 2; s 99.3 2.2E-10 7.6E-15 99.8 19.3 191 112-318 30-236 (302)
10 1zgk_A Kelch-like ECH-associat 99.3 9.1E-11 3.1E-15 102.6 16.1 192 111-318 38-247 (308)
11 4asc_A Kelch repeat and BTB do 99.2 1.7E-09 6E-14 94.7 20.5 194 112-318 13-228 (315)
12 2uvk_A YJHT; unknown function, 99.1 8.6E-09 3E-13 91.8 20.4 207 102-319 19-302 (357)
13 2e31_A FBS1, F-box only protei 99.1 1E-11 3.4E-16 106.0 0.5 48 1-48 51-99 (297)
14 1fs1_A SKP2 F-BOX, cyclin A/CD 99.1 8.4E-12 2.9E-16 78.6 -0.1 41 1-41 9-49 (53)
15 2woz_A Kelch repeat and BTB do 99.1 1.4E-08 4.6E-13 89.1 20.5 194 112-318 24-238 (318)
16 2ovr_B FBW7, F-BOX/WD repeat p 99.0 1.9E-07 6.5E-12 85.5 23.4 235 1-265 19-268 (445)
17 2zwa_A Leucine carboxyl methyl 99.0 3.9E-08 1.3E-12 95.4 19.2 197 112-320 412-644 (695)
18 2uvk_A YJHT; unknown function, 98.9 7.8E-08 2.7E-12 85.6 18.2 148 165-317 168-348 (357)
19 3v7d_B Cell division control p 98.8 5.7E-06 1.9E-10 75.9 27.8 43 2-44 16-59 (464)
20 1p22_A F-BOX/WD-repeat protein 98.8 3.4E-07 1.2E-11 83.6 17.7 280 2-315 12-329 (435)
21 1k3i_A Galactose oxidase precu 98.5 1.3E-06 4.3E-11 84.4 13.1 194 113-318 220-504 (656)
22 2zwa_A Leucine carboxyl methyl 98.3 5.9E-06 2E-10 80.1 14.3 150 164-319 411-591 (695)
23 1k3i_A Galactose oxidase precu 98.1 1.3E-05 4.5E-10 77.3 10.4 142 167-317 168-329 (656)
24 3l2o_B F-box only protein 4; s 98.0 4.2E-07 1.4E-11 76.7 -1.9 47 2-48 6-52 (312)
25 2ast_B S-phase kinase-associat 97.4 1.5E-05 5.2E-10 69.9 -1.0 39 1-39 9-47 (336)
26 2p1m_B Transport inhibitor res 96.9 9.4E-05 3.2E-09 70.2 -1.3 34 1-34 6-40 (594)
27 3ogk_B Coronatine-insensitive 96.4 0.00035 1.2E-08 66.2 -1.2 33 2-34 14-47 (592)
28 3dsm_A Uncharacterized protein 95.7 0.87 3E-05 39.2 22.2 188 111-319 16-221 (328)
29 3mbr_X Glutamine cyclotransfer 95.4 0.92 3.2E-05 37.4 15.5 113 195-319 27-142 (243)
30 3nol_A Glutamine cyclotransfer 95.0 0.79 2.7E-05 38.2 13.8 113 195-319 49-164 (262)
31 3jrp_A Fusion protein of prote 94.9 1.6 5.4E-05 37.5 21.2 141 164-313 78-242 (379)
32 4gqb_B Methylosome protein 50; 94.9 1.7 5.8E-05 37.6 18.2 194 101-317 92-295 (344)
33 4aez_A CDC20, WD repeat-contai 94.6 2.2 7.7E-05 37.5 21.4 179 110-315 111-297 (401)
34 3jro_A Fusion protein of prote 94.5 2 6.7E-05 41.7 17.5 141 164-313 76-240 (753)
35 1l0q_A Surface layer protein; 94.1 2.6 9E-05 36.6 19.9 177 110-316 10-194 (391)
36 3ei3_B DNA damage-binding prot 94.0 2.8 9.7E-05 36.3 21.7 193 104-314 88-285 (383)
37 1l0q_A Surface layer protein; 94.0 2.9 9.8E-05 36.3 20.6 176 110-315 52-237 (391)
38 3dwl_C Actin-related protein 2 93.9 1.4 4.9E-05 38.1 14.1 187 110-314 31-239 (377)
39 1k8k_C P40, ARP2/3 complex 41 93.7 3.1 0.0001 35.7 20.8 185 110-315 28-237 (372)
40 2z2n_A Virginiamycin B lyase; 93.5 2.8 9.6E-05 34.6 20.0 188 100-315 107-299 (299)
41 3q7m_A Lipoprotein YFGL, BAMB; 93.3 3.7 0.00013 35.6 17.7 114 192-316 47-167 (376)
42 1gxr_A ESG1, transducin-like e 93.1 3.4 0.00012 34.7 23.1 194 101-317 61-261 (337)
43 3q7m_A Lipoprotein YFGL, BAMB; 93.1 4 0.00014 35.4 20.5 193 98-316 99-301 (376)
44 4g56_B MGC81050 protein; prote 92.9 3.2 0.00011 36.0 14.6 192 101-316 104-306 (357)
45 3nok_A Glutaminyl cyclase; bet 92.9 1.4 4.7E-05 36.8 11.3 110 196-320 62-174 (268)
46 2iwa_A Glutamine cyclotransfer 92.8 3.7 0.00013 34.2 15.3 111 199-320 32-145 (266)
47 3bws_A Protein LP49; two-domai 92.7 4.9 0.00017 35.3 19.8 188 101-316 179-395 (433)
48 3scy_A Hypothetical bacterial 92.4 4.8 0.00017 34.5 15.8 115 198-318 221-346 (361)
49 3fm0_A Protein CIAO1; WDR39,SG 92.1 5.2 0.00018 34.2 18.7 180 110-309 36-223 (345)
50 2dg1_A DRP35, lactonase; beta 91.6 3.3 0.00011 35.1 12.9 111 197-317 54-177 (333)
51 3e5z_A Putative gluconolactona 91.5 5.3 0.00018 33.2 22.9 194 104-320 42-255 (296)
52 3dwl_C Actin-related protein 2 91.5 6.2 0.00021 33.9 15.1 71 245-317 216-287 (377)
53 3sjl_D Methylamine dehydrogena 91.4 2.3 7.9E-05 37.7 11.7 118 198-324 237-377 (386)
54 4gga_A P55CDC, cell division c 91.4 7.1 0.00024 34.4 20.6 196 100-317 114-316 (420)
55 3hfq_A Uncharacterized protein 90.9 6.8 0.00023 33.3 21.5 153 164-319 161-327 (347)
56 4e54_B DNA damage-binding prot 90.3 6.4 0.00022 34.9 14.0 194 104-315 134-331 (435)
57 3dsm_A Uncharacterized protein 90.2 8 0.00027 32.9 20.8 188 101-315 52-257 (328)
58 3mkq_A Coatomer beta'-subunit; 89.8 15 0.00051 35.4 20.5 183 104-316 69-264 (814)
59 3hfq_A Uncharacterized protein 89.8 8.6 0.00029 32.6 19.2 190 113-317 19-226 (347)
60 2ojh_A Uncharacterized protein 89.5 7.5 0.00026 31.6 17.8 187 111-318 61-265 (297)
61 2aq5_A Coronin-1A; WD40 repeat 89.4 10 0.00035 33.0 22.5 200 104-318 96-308 (402)
62 3bws_A Protein LP49; two-domai 89.0 8.4 0.00029 33.8 13.7 138 166-315 102-247 (433)
63 1ri6_A Putative isomerase YBHE 88.5 10 0.00034 31.8 26.6 150 164-319 150-318 (343)
64 1k8k_C P40, ARP2/3 complex 41 88.1 11 0.00039 31.9 22.6 67 245-317 213-282 (372)
65 3i2n_A WD repeat-containing pr 87.7 12 0.0004 31.6 19.2 191 104-313 131-355 (357)
66 1yfq_A Cell cycle arrest prote 87.1 12 0.00042 31.3 21.9 190 104-315 71-286 (342)
67 1r5m_A SIR4-interacting protei 86.5 15 0.00052 31.7 23.2 188 102-316 119-324 (425)
68 1got_B GT-beta; complex (GTP-b 86.3 14 0.00049 31.3 23.8 179 109-314 74-260 (340)
69 3ow8_A WD repeat-containing pr 85.8 15 0.00051 31.0 20.0 177 110-315 100-283 (321)
70 2hqs_A Protein TOLB; TOLB, PAL 85.8 18 0.00062 31.9 20.9 179 112-317 203-393 (415)
71 3e5z_A Putative gluconolactona 85.6 13 0.00044 30.8 12.2 107 198-317 38-167 (296)
72 3odt_A Protein DOA1; ubiquitin 85.6 14 0.00047 30.4 22.0 188 100-315 27-218 (313)
73 2oiz_A Aromatic amine dehydrog 85.5 17 0.00058 31.4 13.8 81 245-330 265-354 (361)
74 4h5i_A Guanine nucleotide-exch 85.1 18 0.00061 31.2 20.4 182 110-313 155-345 (365)
75 3vl1_A 26S proteasome regulato 84.9 19 0.00064 31.3 22.4 187 104-317 111-330 (420)
76 2hqs_A Protein TOLB; TOLB, PAL 84.8 20 0.00068 31.6 18.6 183 112-317 159-350 (415)
77 3g4e_A Regucalcin; six bladed 84.4 16 0.00056 30.3 21.4 199 99-320 21-239 (297)
78 2dg1_A DRP35, lactonase; beta 84.0 18 0.00061 30.3 20.0 203 101-320 54-272 (333)
79 3no2_A Uncharacterized protein 83.7 17 0.0006 30.0 14.9 184 104-315 7-199 (276)
80 3hrp_A Uncharacterized protein 83.6 8.8 0.0003 34.1 10.6 109 197-317 140-255 (409)
81 2mad_H Methylamine dehydrogena 83.5 22 0.00075 31.0 13.4 69 245-317 278-356 (373)
82 1sq9_A Antiviral protein SKI8; 83.3 21 0.00072 30.6 22.5 64 245-315 197-271 (397)
83 3lrv_A PRE-mRNA-splicing facto 83.3 20 0.00068 30.3 13.7 96 213-315 105-205 (343)
84 3vu4_A KMHSV2; beta-propeller 83.0 21 0.00073 30.5 16.8 64 245-314 206-274 (355)
85 1pby_B Quinohemoprotein amine 82.9 19 0.00066 29.9 17.9 98 213-320 220-320 (337)
86 3sfz_A APAF-1, apoptotic pepti 82.8 7 0.00024 40.1 10.8 182 105-315 976-1162(1249)
87 3jrp_A Fusion protein of prote 82.8 21 0.00071 30.2 17.1 139 164-313 32-193 (379)
88 3scy_A Hypothetical bacterial 82.5 22 0.00075 30.2 21.2 151 164-318 74-249 (361)
89 1gxr_A ESG1, transducin-like e 82.1 20 0.0007 29.6 21.7 183 104-316 111-301 (337)
90 2ojh_A Uncharacterized protein 81.9 19 0.00064 29.1 20.2 182 111-317 21-212 (297)
91 3lrv_A PRE-mRNA-splicing facto 81.7 23 0.00079 29.9 18.1 200 96-316 88-299 (343)
92 2aq5_A Coronin-1A; WD40 repeat 81.6 25 0.00087 30.4 20.0 196 104-320 146-351 (402)
93 3sfz_A APAF-1, apoptotic pepti 81.6 49 0.0017 33.7 24.9 180 109-317 634-834 (1249)
94 3v9f_A Two-component system se 81.2 41 0.0014 32.5 21.1 196 102-319 417-619 (781)
95 2pm9_A Protein WEB1, protein t 81.2 26 0.00088 30.2 15.2 181 110-312 43-250 (416)
96 1r5m_A SIR4-interacting protei 81.1 26 0.00088 30.2 18.3 186 101-311 216-425 (425)
97 3dm0_A Maltose-binding peripla 81.1 38 0.0013 32.1 21.3 95 212-315 541-636 (694)
98 3mmy_A MRNA export factor; mRN 81.0 24 0.00081 29.6 17.7 189 105-315 101-308 (368)
99 4ery_A WD repeat-containing pr 80.9 23 0.00077 29.3 22.4 176 110-315 43-227 (312)
100 1q7f_A NHL, brain tumor CG1071 80.9 21 0.00073 29.1 24.7 187 100-311 86-280 (286)
101 3dr2_A Exported gluconolactona 80.8 23 0.00079 29.4 16.6 193 104-321 59-277 (305)
102 3frx_A Guanine nucleotide-bind 80.8 24 0.00082 29.6 22.3 94 212-314 176-270 (319)
103 1nir_A Nitrite reductase; hemo 80.2 36 0.0012 31.3 19.9 116 198-315 334-462 (543)
104 1rwi_B Serine/threonine-protei 80.0 22 0.00074 28.6 12.0 107 198-317 77-186 (270)
105 3jro_A Fusion protein of prote 79.8 44 0.0015 32.1 14.9 96 212-313 31-134 (753)
106 2pm9_A Protein WEB1, protein t 79.7 29 0.00099 29.9 14.7 195 104-314 128-340 (416)
107 1rwi_B Serine/threonine-protei 79.4 23 0.00078 28.5 19.0 183 102-313 77-266 (270)
108 3fm0_A Protein CIAO1; WDR39,SG 79.2 28 0.00097 29.5 18.9 145 164-317 37-187 (345)
109 2ovr_B FBW7, F-BOX/WD repeat p 78.8 34 0.0012 30.1 22.8 109 195-312 325-443 (445)
110 3vgz_A Uncharacterized protein 78.2 29 0.00099 29.0 26.2 202 99-316 97-308 (353)
111 3odt_A Protein DOA1; ubiquitin 78.2 26 0.0009 28.6 22.3 95 212-317 205-302 (313)
112 4a11_B DNA excision repair pro 78.2 31 0.0011 29.4 18.3 98 212-315 267-369 (408)
113 1jmx_B Amine dehydrogenase; ox 78.0 16 0.00054 30.7 10.0 105 197-313 9-136 (349)
114 3v7d_B Cell division control p 77.3 38 0.0013 29.9 22.9 95 212-317 332-427 (464)
115 2z2n_A Virginiamycin B lyase; 77.3 28 0.00095 28.3 22.2 194 97-319 20-220 (299)
116 3u4y_A Uncharacterized protein 76.7 31 0.0011 28.6 22.5 181 110-314 18-210 (331)
117 3dr2_A Exported gluconolactona 76.4 27 0.00094 29.0 11.0 108 198-318 55-185 (305)
118 3o4h_A Acylamino-acid-releasin 76.4 47 0.0016 30.5 14.6 188 103-317 123-320 (582)
119 3g4e_A Regucalcin; six bladed 76.0 32 0.0011 28.4 14.5 100 198-311 24-139 (297)
120 1got_B GT-beta; complex (GTP-b 76.0 35 0.0012 28.8 18.6 179 102-308 154-340 (340)
121 2ghs_A AGR_C_1268P; regucalcin 75.7 35 0.0012 28.7 14.1 103 199-317 61-174 (326)
122 3u4y_A Uncharacterized protein 75.6 34 0.0011 28.4 22.2 187 110-318 60-259 (331)
123 2ad6_A Methanol dehydrogenase 75.5 39 0.0013 31.4 12.6 115 192-316 56-190 (571)
124 2hz6_A Endoplasmic reticulum t 75.4 6.9 0.00023 34.1 7.0 102 197-316 91-197 (369)
125 2fp8_A Strictosidine synthase; 74.7 37 0.0013 28.4 14.3 95 164-265 206-313 (322)
126 3zwl_B Eukaryotic translation 74.6 37 0.0013 28.4 22.2 191 104-316 88-309 (369)
127 4e54_B DNA damage-binding prot 74.5 44 0.0015 29.3 15.2 56 255-316 377-435 (435)
128 2ynn_A Coatomer subunit beta'; 74.5 35 0.0012 28.2 21.3 186 104-317 69-265 (304)
129 2qc5_A Streptogramin B lactona 74.5 33 0.0011 27.8 22.4 192 100-320 70-268 (300)
130 1nir_A Nitrite reductase; hemo 73.5 56 0.0019 30.0 20.1 190 102-316 148-360 (543)
131 4aez_A CDC20, WD repeat-contai 73.2 45 0.0015 28.8 21.2 96 212-316 284-385 (401)
132 3nol_A Glutamine cyclotransfer 72.8 39 0.0013 27.9 13.5 139 164-320 64-211 (262)
133 1kv9_A Type II quinohemoprotei 72.3 36 0.0012 32.3 11.8 115 192-316 60-192 (668)
134 3ow8_A WD repeat-containing pr 72.2 42 0.0015 28.1 20.9 128 164-309 185-319 (321)
135 4a11_B DNA excision repair pro 72.0 46 0.0016 28.3 18.4 140 164-315 121-280 (408)
136 1pjx_A Dfpase, DIISOPROPYLFLUO 71.3 41 0.0014 27.6 22.4 192 110-318 44-264 (314)
137 3vl1_A 26S proteasome regulato 70.2 52 0.0018 28.3 14.0 107 198-316 108-217 (420)
138 2bkl_A Prolyl endopeptidase; m 69.9 76 0.0026 30.0 21.3 189 113-318 203-404 (695)
139 3c75_H MADH, methylamine dehyd 69.8 57 0.0019 29.1 11.7 67 245-315 330-406 (426)
140 3mkq_A Coatomer beta'-subunit; 69.4 81 0.0028 30.1 21.7 176 110-314 33-220 (814)
141 3vgz_A Uncharacterized protein 69.3 49 0.0017 27.6 19.8 170 102-298 152-330 (353)
142 3i2n_A WD repeat-containing pr 69.3 49 0.0017 27.5 21.9 108 197-313 178-293 (357)
143 3mmy_A MRNA export factor; mRN 68.6 49 0.0017 27.6 11.0 68 246-317 54-123 (368)
144 1q7f_A NHL, brain tumor CG1071 68.5 46 0.0016 27.0 24.3 198 101-319 39-246 (286)
145 3sov_A LRP-6, low-density lipo 68.2 51 0.0017 27.9 10.8 62 198-264 46-109 (318)
146 4aow_A Guanine nucleotide-bind 68.0 50 0.0017 27.2 21.6 95 212-315 195-290 (340)
147 1pgu_A Actin interacting prote 67.9 73 0.0025 29.0 21.7 66 245-316 171-243 (615)
148 1n7d_A LDL receptor, low-densi 67.5 53 0.0018 31.4 11.7 140 164-317 474-620 (699)
149 2vdu_B TRNA (guanine-N(7)-)-me 67.3 65 0.0022 28.3 22.5 96 212-315 171-275 (450)
150 1kb0_A Quinohemoprotein alcoho 67.2 47 0.0016 31.6 11.3 115 192-316 71-204 (677)
151 1pby_B Quinohemoprotein amine 67.1 52 0.0018 27.1 12.3 98 212-315 11-128 (337)
152 1yiq_A Quinohemoprotein alcoho 66.6 53 0.0018 31.3 11.6 115 192-316 64-197 (689)
153 1flg_A Protein (quinoprotein e 66.5 84 0.0029 29.2 13.6 119 192-317 62-199 (582)
154 1ri6_A Putative isomerase YBHE 65.3 57 0.0019 26.9 22.8 102 212-318 151-271 (343)
155 1erj_A Transcriptional repress 65.1 67 0.0023 27.7 14.8 105 198-315 134-242 (393)
156 4a2l_A BT_4663, two-component 65.0 1E+02 0.0035 29.7 25.0 200 101-318 366-578 (795)
157 2qc5_A Streptogramin B lactona 64.0 56 0.0019 26.4 22.5 194 97-319 25-225 (300)
158 3v9f_A Two-component system se 63.9 1.1E+02 0.0036 29.5 22.6 110 198-318 417-531 (781)
159 3iuj_A Prolyl endopeptidase; h 63.8 1E+02 0.0035 29.2 20.8 157 148-318 243-412 (693)
160 3k26_A Polycomb protein EED; W 63.2 65 0.0022 26.8 17.1 192 104-313 87-320 (366)
161 3hxj_A Pyrrolo-quinoline quino 63.0 19 0.00065 30.0 7.1 29 198-230 147-175 (330)
162 2p4o_A Hypothetical protein; p 62.4 66 0.0023 26.6 14.7 105 198-313 42-149 (306)
163 2hz6_A Endoplasmic reticulum t 61.6 1.7 5.8E-05 38.1 0.0 27 193-223 4-30 (369)
164 3tc9_A Hypothetical hydrolase; 60.6 90 0.0031 27.6 16.8 108 198-317 149-263 (430)
165 3iz6_a 40S ribosomal protein R 60.6 80 0.0027 27.0 18.3 99 212-316 180-285 (380)
166 2ymu_A WD-40 repeat protein; u 60.3 99 0.0034 28.0 22.7 95 212-317 448-545 (577)
167 1yr2_A Prolyl oligopeptidase; 59.9 1.2E+02 0.0042 28.9 22.4 162 143-317 271-447 (741)
168 1qks_A Cytochrome CD1 nitrite 59.8 1.1E+02 0.0038 28.4 21.9 187 110-319 175-382 (567)
169 2iwa_A Glutamine cyclotransfer 59.7 73 0.0025 26.3 18.6 185 102-313 31-239 (266)
170 3mbr_X Glutamine cyclotransfer 59.6 70 0.0024 26.0 17.1 140 164-321 42-190 (243)
171 3zwl_B Eukaryotic translation 59.6 75 0.0026 26.4 23.2 67 245-316 186-254 (369)
172 1jmx_B Amine dehydrogenase; ox 59.2 61 0.0021 26.8 9.7 67 245-315 10-78 (349)
173 2hes_X YDR267CP; beta-propelle 59.1 78 0.0027 26.4 18.4 72 246-317 211-286 (330)
174 2ymu_A WD-40 repeat protein; u 58.1 1.1E+02 0.0037 27.7 24.8 95 212-317 407-504 (577)
175 3hrp_A Uncharacterized protein 56.8 1E+02 0.0035 27.0 22.3 195 101-318 140-361 (409)
176 4g56_B MGC81050 protein; prote 56.8 91 0.0031 26.4 18.0 186 101-312 149-344 (357)
177 1vyh_C Platelet-activating fac 56.7 98 0.0034 26.8 21.4 62 246-313 308-371 (410)
178 3fvz_A Peptidyl-glycine alpha- 56.3 88 0.003 26.1 14.3 158 93-265 145-322 (329)
179 3gre_A Serine/threonine-protei 56.0 1E+02 0.0034 26.7 18.6 108 199-317 182-298 (437)
180 2ynn_A Coatomer subunit beta'; 55.3 86 0.0029 25.7 15.2 92 212-313 35-130 (304)
181 2xzm_R RACK1; ribosome, transl 54.7 94 0.0032 26.0 10.3 71 245-315 38-111 (343)
182 3f3f_A Nucleoporin SEH1; struc 53.4 91 0.0031 25.4 16.2 69 245-313 70-145 (351)
183 2vdu_B TRNA (guanine-N(7)-)-me 52.1 1.2E+02 0.0042 26.5 23.9 144 164-317 219-399 (450)
184 4ggc_A P55CDC, cell division c 51.8 95 0.0032 25.2 21.3 196 100-317 34-236 (318)
185 3bg1_A Protein SEC13 homolog; 51.3 1E+02 0.0035 25.4 16.9 62 247-311 180-247 (316)
186 3azo_A Aminopeptidase; POP fam 50.6 1.6E+02 0.0054 27.3 20.7 189 112-317 161-375 (662)
187 4h5i_A Guanine nucleotide-exch 49.5 1.2E+02 0.0042 25.7 16.1 138 164-315 156-304 (365)
188 1yfq_A Cell cycle arrest prote 49.2 1.1E+02 0.0037 25.1 17.4 179 105-312 26-226 (342)
189 1w6s_A Methanol dehydrogenase 47.9 1.8E+02 0.0061 27.2 12.9 115 192-316 56-196 (599)
190 4gqb_B Methylosome protein 50; 47.7 1.3E+02 0.0044 25.5 18.7 178 110-314 147-334 (344)
191 4aow_A Guanine nucleotide-bind 47.4 1.2E+02 0.004 24.9 19.1 95 213-315 151-250 (340)
192 4a2l_A BT_4663, two-component 47.4 2E+02 0.0068 27.6 24.8 205 97-318 220-443 (795)
193 2qe8_A Uncharacterized protein 46.2 1.2E+02 0.0042 25.4 9.5 71 194-264 71-153 (343)
194 1sq9_A Antiviral protein SKI8; 46.1 1.3E+02 0.0046 25.3 20.3 96 212-313 258-397 (397)
195 4ery_A WD repeat-containing pr 45.7 1.2E+02 0.0042 24.7 21.4 176 110-310 127-311 (312)
196 3tc9_A Hypothetical hydrolase; 45.4 1.6E+02 0.0055 26.0 16.3 145 97-264 143-300 (430)
197 2xyi_A Probable histone-bindin 45.0 1.5E+02 0.0053 25.7 14.7 196 104-315 196-414 (430)
198 1erj_A Transcriptional repress 43.0 1.6E+02 0.0054 25.2 23.8 194 102-315 134-345 (393)
199 2lyd_A Decapping protein 1; DC 42.3 53 0.0018 24.0 5.4 28 294-321 30-57 (134)
200 1yiq_A Quinohemoprotein alcoho 41.8 2.3E+02 0.008 26.8 15.8 30 193-226 116-147 (689)
201 2fp8_A Strictosidine synthase; 41.3 1.5E+02 0.0051 24.5 19.3 101 212-320 165-278 (322)
202 1mda_H Methylamine dehydrogena 41.0 79 0.0027 27.5 7.4 112 198-320 222-356 (368)
203 2pm7_B Protein transport prote 40.2 1.5E+02 0.0051 24.1 14.3 64 246-313 67-134 (297)
204 3nok_A Glutaminyl cyclase; bet 39.9 1.6E+02 0.0054 24.3 15.1 135 167-320 77-220 (268)
205 2dk7_A Transcription elongatio 39.4 27 0.00093 22.4 3.0 21 295-315 23-43 (73)
206 1kv9_A Type II quinohemoprotei 38.6 2.6E+02 0.0088 26.4 15.4 30 193-226 112-143 (668)
207 3k26_A Polycomb protein EED; W 38.3 1.7E+02 0.0057 24.1 20.6 64 246-311 299-366 (366)
208 2be1_A Serine/threonine-protei 38.2 63 0.0021 27.8 6.2 57 164-224 66-133 (339)
209 2be1_A Serine/threonine-protei 38.1 77 0.0026 27.2 6.7 26 292-317 111-136 (339)
210 3m0c_C LDL receptor, low-densi 37.6 3E+02 0.01 26.8 26.5 156 164-333 492-654 (791)
211 1xfd_A DIP, dipeptidyl aminope 37.0 2.6E+02 0.009 26.1 18.0 108 111-227 36-149 (723)
212 1npe_A Nidogen, entactin; glyc 36.8 1.6E+02 0.0054 23.4 15.2 109 198-317 47-161 (267)
213 3gre_A Serine/threonine-protei 36.7 1.7E+02 0.0058 25.2 9.1 65 245-315 181-249 (437)
214 3no2_A Uncharacterized protein 36.2 1.7E+02 0.0059 23.7 17.6 142 164-320 14-164 (276)
215 3sov_A LRP-6, low-density lipo 35.7 1.9E+02 0.0067 24.1 15.2 137 164-317 100-245 (318)
216 3ott_A Two-component system se 34.3 3.1E+02 0.011 26.1 13.9 100 203-317 77-180 (758)
217 1kb0_A Quinohemoprotein alcoho 33.6 3.1E+02 0.011 25.9 14.4 28 192-223 122-149 (677)
218 2xyi_A Probable histone-bindin 33.4 2.4E+02 0.0081 24.4 12.9 65 245-312 243-310 (430)
219 4a0p_A LRP6, LRP-6, low-densit 33.4 3.1E+02 0.01 25.7 12.0 132 198-336 400-533 (628)
220 3ei3_B DNA damage-binding prot 33.3 2.2E+02 0.0074 23.9 19.3 135 164-311 95-236 (383)
221 2qkl_A DCP1 protein, SPBC3B9.2 32.9 26 0.00088 25.4 2.4 28 294-321 25-52 (127)
222 2kwv_A RAD30 homolog B, DNA po 32.7 21 0.00073 20.4 1.5 18 2-19 22-39 (48)
223 3f3f_A Nucleoporin SEH1; struc 32.2 2E+02 0.0068 23.2 25.7 116 199-319 182-346 (351)
224 1q67_A Decapping protein invol 32.1 78 0.0027 25.0 5.1 28 294-321 36-63 (231)
225 2pbi_B Guanine nucleotide-bind 31.7 2.3E+02 0.0078 23.7 15.7 126 198-334 209-337 (354)
226 2z3z_A Dipeptidyl aminopeptida 31.2 3.3E+02 0.011 25.4 22.9 189 112-314 235-438 (706)
227 3frx_A Guanine nucleotide-bind 31.0 2.2E+02 0.0075 23.3 21.2 94 212-315 129-231 (319)
228 1w6s_A Methanol dehydrogenase 30.9 2.7E+02 0.0094 25.9 9.8 78 166-253 454-534 (599)
229 3pe7_A Oligogalacturonate lyas 30.6 2.4E+02 0.0082 23.6 13.7 98 211-317 167-279 (388)
230 3bg1_A Protein SEC13 homolog; 30.3 2.3E+02 0.0077 23.2 11.0 69 245-317 24-96 (316)
231 1flg_A Protein (quinoprotein e 30.2 2.9E+02 0.01 25.5 9.9 78 166-253 467-547 (582)
232 1qks_A Cytochrome CD1 nitrite 30.1 3.3E+02 0.011 25.1 14.0 110 198-319 166-284 (567)
233 2xzm_R RACK1; ribosome, transl 29.5 2.4E+02 0.0083 23.3 22.6 94 212-314 194-288 (343)
234 1p22_A F-BOX/WD-repeat protein 29.2 2.8E+02 0.0095 23.9 20.5 135 164-315 152-289 (435)
235 2pm7_B Protein transport prote 28.0 2.4E+02 0.0081 22.8 21.1 65 246-312 170-239 (297)
236 3dm0_A Maltose-binding peripla 27.9 3.8E+02 0.013 25.0 19.7 97 212-314 494-595 (694)
237 2hes_X YDR267CP; beta-propelle 26.2 2.7E+02 0.0094 22.9 20.4 68 241-312 256-329 (330)
238 1nr0_A Actin interacting prote 25.3 4E+02 0.014 24.4 19.3 219 74-317 5-227 (611)
239 2oaj_A Protein SNI1; WD40 repe 25.2 4.9E+02 0.017 25.5 14.6 109 198-319 28-137 (902)
240 2ghs_A AGR_C_1268P; regucalcin 24.6 3E+02 0.01 22.7 23.1 195 102-320 60-269 (326)
241 3hxj_A Pyrrolo-quinoline quino 24.5 2.8E+02 0.0096 22.4 10.3 17 213-229 236-252 (330)
242 3v65_B Low-density lipoprotein 24.0 3.4E+02 0.012 23.2 20.4 109 198-318 213-326 (386)
243 1pgu_A Actin interacting prote 24.0 3.9E+02 0.013 23.9 22.7 158 142-314 163-331 (615)
244 2j04_A TAU60, YPL007P, hypothe 23.6 4.5E+02 0.015 24.5 14.3 110 198-313 96-213 (588)
245 3p5b_L Low density lipoprotein 23.3 3.6E+02 0.012 23.3 23.1 140 164-317 180-327 (400)
246 2p9w_A MAL S 1 allergenic prot 23.3 3.5E+02 0.012 23.1 10.4 100 211-312 99-216 (334)
247 3v65_B Low-density lipoprotein 22.7 3.6E+02 0.012 23.1 22.7 140 102-265 87-232 (386)
248 2p4o_A Hypothetical protein; p 22.2 3.2E+02 0.011 22.2 21.6 194 102-316 42-246 (306)
249 1vyh_C Platelet-activating fac 21.5 3.8E+02 0.013 22.9 23.7 138 105-265 123-265 (410)
250 3kvp_A Uncharacterized protein 21.1 92 0.0031 19.6 2.9 15 303-317 41-55 (72)
251 4hw6_A Hypothetical protein, I 20.7 4.3E+02 0.015 23.2 17.3 112 192-314 141-262 (433)
No 1
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.43 E-value=3.5e-11 Score=105.57 Aligned_cols=187 Identities=14% Similarity=0.076 Sum_probs=127.9
Q ss_pred EEEEEcccccceeecCCCCCCCCCCCCCCeeEEee--eCCceEEEEEee-E----eCCCcEEEEEEeCCCceEEecccCC
Q 047931 113 IFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC--TAEDCKFIKVSF-G----LKPNMSVAIFSLRMNSWRRVLASGY 185 (339)
Q Consensus 113 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~--~~~~ykvv~~~~-~----~~~~~~~~vyss~~~~W~~~~~~~~ 185 (339)
.++++||.|++|..+|+++.. ..+.+. ..+ ++..+.- . ......+++|+..+++|+.++.+|.
T Consensus 68 ~~~~~d~~~~~W~~~~~~p~~--------r~~~~~~~~~~--~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~ 137 (315)
T 4asc_A 68 YFLQFDHLDSEWLGMPPLPSP--------RCLFGLGEALN--SIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPY 137 (315)
T ss_dssp EEEEEETTTTEEEECCCBSSC--------EESCEEEEETT--EEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSS
T ss_pred ceEEecCCCCeEEECCCCCcc--------hhceeEEEECC--EEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCC
Confidence 488999999999999988755 222222 222 3333331 1 1125679999999999999987776
Q ss_pred ccCccCCCceEECCeEEEEEecC---CCCeEEEEEECCCceeeee-cCCCCCCCCceeEEEEECCeEEEEEe-CC--CeE
Q 047931 186 TRPLINVPGTLTNGALHWRLQKH---GGDFVLAAFDLVEERFKEF-PLPDASTSFRFFGTGVLGDCLCLQFF-KG--KMK 258 (339)
Q Consensus 186 ~~~~~~~~~v~~~G~lyw~~~~~---~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~l~~~~G~L~~v~~-~~--~~l 258 (339)
.. .....+.++|.+|.++... .....+..||+.+++|+.+ ++|... .....+..+|+|+++.. .. ..-
T Consensus 138 ~r--~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r---~~~~~~~~~~~iyv~GG~~~~~~~~ 212 (315)
T 4asc_A 138 VV--YGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTAR---SLFGATVHDGRIIVAAGVTDTGLTS 212 (315)
T ss_dssp CC--BSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCC---BSCEEEEETTEEEEEEEECSSSEEE
T ss_pred cc--cceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCch---hceEEEEECCEEEEEeccCCCCccc
Confidence 53 3455788999999998763 2245799999999999998 455443 34566788999999998 22 234
Q ss_pred EEEEEcccCCCCCeEEEEEecCCCCeeEEEEEeCCeEEEEECC---------------cEEEEEECCCCcEEEe
Q 047931 259 EHWIMKEYGVKESWTRVFIHQDPNNVWPLCLWKNSTKLLVINR---------------KNLLVCDCNNEGSEDV 317 (339)
Q Consensus 259 ~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~i~~~~~~---------------~~~~~yd~~t~~~~~v 317 (339)
++|.++-. ..+|..+..++.+......++ -++.+++..+. ..+..||+++++|+.+
T Consensus 213 ~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 213 SAEVYSIT--DNKWAPFEAFPQERSSLSLVS-LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp EEEEEETT--TTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE
T ss_pred eEEEEECC--CCeEEECCCCCCcccceeEEE-ECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh
Confidence 67777642 367998866554331222223 35677765432 2489999999999999
No 2
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.41 E-value=3.7e-11 Score=104.92 Aligned_cols=193 Identities=12% Similarity=-0.003 Sum_probs=128.9
Q ss_pred CCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEeeeCCceEEEEEee-E--eCCCcEEEEEEeCCCceEEecccCCcc
Q 047931 111 PKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGCTAEDCKFIKVSF-G--LKPNMSVAIFSLRMNSWRRVLASGYTR 187 (339)
Q Consensus 111 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~ykvv~~~~-~--~~~~~~~~vyss~~~~W~~~~~~~~~~ 187 (339)
...+.++||.|++|..+|+++.. +....... ..+ +++.+.- . ......+++|+..++.|+.++.+|...
T Consensus 69 ~~~~~~~d~~~~~W~~~~~~p~~---r~~~~~~~---~~~--~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r 140 (306)
T 3ii7_A 69 IKRMDCYNVVKDSWYSKLGPPTP---RDSLAACA---AEG--KIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQR 140 (306)
T ss_dssp CCEEEEEETTTTEEEEEECCSSC---CBSCEEEE---ETT--EEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCC
T ss_pred cceEEEEeCCCCeEEECCCCCcc---ccceeEEE---ECC--EEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCc
Confidence 36899999999999999887754 12211111 122 2333320 1 112567999999999999998877653
Q ss_pred CccCCCceEECCeEEEEEecC--CC----CeEEEEEECCCceeeee-cCCCCCCCCceeEEEEECCeEEEEEe-CCC--e
Q 047931 188 PLINVPGTLTNGALHWRLQKH--GG----DFVLAAFDLVEERFKEF-PLPDASTSFRFFGTGVLGDCLCLQFF-KGK--M 257 (339)
Q Consensus 188 ~~~~~~~v~~~G~lyw~~~~~--~~----~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~l~~~~G~L~~v~~-~~~--~ 257 (339)
.....+.++|.+|.++... .. ...+..||+++++|+.+ ++|... ....++..+|+|+++.. ... .
T Consensus 141 --~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r---~~~~~~~~~~~i~v~GG~~~~~~~ 215 (306)
T 3ii7_A 141 --CSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEAR---KNHGLVFVKDKIFAVGGQNGLGGL 215 (306)
T ss_dssp --BSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCC---BSCEEEEETTEEEEECCEETTEEB
T ss_pred --ceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchh---hcceEEEECCEEEEEeCCCCCCCC
Confidence 3455688999999997654 11 45799999999999998 455443 34566778999999987 221 2
Q ss_pred EEEEEEcccCCCCCeEEEEEecCCCCeeEEEEEeCCeEEEEECC------cEEEEEECCCCcEEEeEE
Q 047931 258 KEHWIMKEYGVKESWTRVFIHQDPNNVWPLCLWKNSTKLLVINR------KNLLVCDCNNEGSEDVAV 319 (339)
Q Consensus 258 l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~i~~~~~~------~~~~~yd~~t~~~~~v~~ 319 (339)
-++|.++-. ..+|..+..++.+......++ -++.|++..+. ..+..||+++++|+.+.-
T Consensus 216 ~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 280 (306)
T 3ii7_A 216 DNVEYYDIK--LNEWKMVSPMPWKGVTVKCAA-VGSIVYVLAGFQGVGRLGHILEYNTETDKWVANSK 280 (306)
T ss_dssp CCEEEEETT--TTEEEECCCCSCCBSCCEEEE-ETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEE
T ss_pred ceEEEeeCC--CCcEEECCCCCCCccceeEEE-ECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCC
Confidence 356666642 367998765554321222223 26677777642 359999999999999853
No 3
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.39 E-value=3.5e-11 Score=105.72 Aligned_cols=189 Identities=12% Similarity=0.116 Sum_probs=125.9
Q ss_pred EEEEEcccccceeecCCCCCCCCCCCCCCeeEEeeeCCceEEEEEeeEe--C--CCcEEEEEEeCCCceEEecccCCccC
Q 047931 113 IFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGCTAEDCKFIKVSFGL--K--PNMSVAIFSLRMNSWRRVLASGYTRP 188 (339)
Q Consensus 113 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~ykvv~~~~~~--~--~~~~~~vyss~~~~W~~~~~~~~~~~ 188 (339)
.++++||.|++|..+|+++.. ... .+.....+ ++..+.-.. . ....+++|+..+++|+.++.+|...
T Consensus 79 ~~~~~d~~~~~W~~~~~~p~~----r~~--~~~~~~~~--~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r- 149 (318)
T 2woz_A 79 YFFQLDNVSSEWVGLPPLPSA----RCL--FGLGEVDD--KIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKV- 149 (318)
T ss_dssp EEEEEETTTTEEEECSCBSSC----BCS--CEEEEETT--EEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCE-
T ss_pred cEEEEeCCCCcEEECCCCCcc----ccc--cceEEECC--EEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcc-
Confidence 388999999999999987765 111 11111222 222222011 1 1357999999999999998777653
Q ss_pred ccCCCceEECCeEEEEEecC---CCCeEEEEEECCCceeeee-cCCCCCCCCceeEEEEECCeEEEEEe-CC--CeEEEE
Q 047931 189 LINVPGTLTNGALHWRLQKH---GGDFVLAAFDLVEERFKEF-PLPDASTSFRFFGTGVLGDCLCLQFF-KG--KMKEHW 261 (339)
Q Consensus 189 ~~~~~~v~~~G~lyw~~~~~---~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~l~~~~G~L~~v~~-~~--~~l~iW 261 (339)
.....+.++|.+|.++... .....+..||+.+++|+.+ ++|... .....+..+|+|+++.. .. ..-++|
T Consensus 150 -~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r---~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 225 (318)
T 2woz_A 150 -YGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPR---SMFGVAIHKGKIVIAGGVTEDGLSASVE 225 (318)
T ss_dssp -ESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCC---BSCEEEEETTEEEEEEEEETTEEEEEEE
T ss_pred -cccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCc---ccceEEEECCEEEEEcCcCCCCccceEE
Confidence 3455678999999997653 1234699999999999998 444433 34456778999999998 22 234677
Q ss_pred EEcccCCCCCeEEEEEecCCCCeeEEEEEeCCeEEEEECC---------------cEEEEEECCCCcEEEe
Q 047931 262 IMKEYGVKESWTRVFIHQDPNNVWPLCLWKNSTKLLVINR---------------KNLLVCDCNNEGSEDV 317 (339)
Q Consensus 262 ~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~i~~~~~~---------------~~~~~yd~~t~~~~~v 317 (339)
.++- ...+|..+..++.+.....+++ .++.|++..+. ..+..||+++++|+++
T Consensus 226 ~yd~--~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 226 AFDL--KTNKWEVMTEFPQERSSISLVS-LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp EEET--TTCCEEECCCCSSCCBSCEEEE-ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred EEEC--CCCeEEECCCCCCcccceEEEE-ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 7764 2467998766654331222333 35677776431 2499999999999998
No 4
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.39 E-value=3.8e-11 Score=104.68 Aligned_cols=193 Identities=14% Similarity=0.086 Sum_probs=126.5
Q ss_pred CEEEEEcccccceeecCCCCCCCCCCCCCCeeEEeeeCCceEEEEEeeEeCCCcEEEEEEeCCCceEEecccCCccCccC
Q 047931 112 KIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGCTAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRVLASGYTRPLIN 191 (339)
Q Consensus 112 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~~~~~~ 191 (339)
..+.++||.|++|..+|+++.. +... +.....+..-|+.-.........+++|+..++.|+.++.+|... ..
T Consensus 77 ~~~~~~d~~~~~W~~~~~~p~~---r~~~---~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r--~~ 148 (302)
T 2xn4_A 77 RTVDSYDPVKDQWTSVANMRDR---RSTL---GAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRR--SS 148 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSC---CBSC---EEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCC--BS
T ss_pred cceEEECCCCCceeeCCCCCcc---ccce---EEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcc--cC
Confidence 4789999999999999987754 1211 11111222222221101111357899999999999998777653 34
Q ss_pred CCceEECCeEEEEEecC-CC---CeEEEEEECCCceeeee-cCCCCCCCCceeEEEEECCeEEEEEe-CC--CeEEEEEE
Q 047931 192 VPGTLTNGALHWRLQKH-GG---DFVLAAFDLVEERFKEF-PLPDASTSFRFFGTGVLGDCLCLQFF-KG--KMKEHWIM 263 (339)
Q Consensus 192 ~~~v~~~G~lyw~~~~~-~~---~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~l~~~~G~L~~v~~-~~--~~l~iW~l 263 (339)
...+.++|.+|.++... .. ...+..||+.+++|+.+ ++|... ....++..+|+|+++.. .. ..-++|.+
T Consensus 149 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r---~~~~~~~~~~~iyv~GG~~~~~~~~~~~~y 225 (302)
T 2xn4_A 149 VGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRR---SGAGVGVLNNLLYAVGGHDGPLVRKSVEVY 225 (302)
T ss_dssp CEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCC---BSCEEEEETTEEEEECCBSSSSBCCCEEEE
T ss_pred ceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCcccc---ccccEEEECCEEEEECCCCCCcccceEEEE
Confidence 45688999999997653 11 34689999999999998 455443 34566788999999987 21 12356776
Q ss_pred cccCCCCCeEEEEEecCCCCeeEEEEEeCCeEEEEECC------cEEEEEECCCCcEEEeE
Q 047931 264 KEYGVKESWTRVFIHQDPNNVWPLCLWKNSTKLLVINR------KNLLVCDCNNEGSEDVA 318 (339)
Q Consensus 264 ~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~i~~~~~~------~~~~~yd~~t~~~~~v~ 318 (339)
+-. ..+|..+..++.+.....+++ .++.|++..+. ..+..||+++++|+.+.
T Consensus 226 d~~--~~~W~~~~~~~~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 226 DPT--TNAWRQVADMNMCRRNAGVCA-VNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVS 283 (302)
T ss_dssp ETT--TTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTEEEECS
T ss_pred eCC--CCCEeeCCCCCCccccCeEEE-ECCEEEEECCcCCCcccccEEEEcCCCCeEEECC
Confidence 642 367998766554321222223 36677776542 24999999999999984
No 5
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.38 E-value=5.9e-11 Score=103.84 Aligned_cols=192 Identities=14% Similarity=0.094 Sum_probs=127.4
Q ss_pred CEEEEEcccccceeecCCCCCCCCCCCCCCeeEEeeeCCceEEEEEeeEeC--CCcEEEEEEeCCCceEEecccCCccCc
Q 047931 112 KIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGCTAEDCKFIKVSFGLK--PNMSVAIFSLRMNSWRRVLASGYTRPL 189 (339)
Q Consensus 112 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~ykvv~~~~~~~--~~~~~~vyss~~~~W~~~~~~~~~~~~ 189 (339)
..++++||.|++|..+|+++.. +... +.....+ +++.+.-... ....+++|+..++.|+.++.+|...
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~---r~~~---~~~~~~~--~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-- 159 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMSVP---RNRI---GVGVIDG--HIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRR-- 159 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSC---CBTC---EEEEETT--EEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCC--
T ss_pred ceEEEECCCCCeEeECCCCCcC---cccc---EEEEECC--EEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccc--
Confidence 4689999999999999987754 1221 1111122 2333320111 1457999999999999998777553
Q ss_pred cCCCceEECCeEEEEEecC--CCCeEEEEEECCCceeeee-cCCCCCCCCceeEEEEECCeEEEEEe-C--CCeEEEEEE
Q 047931 190 INVPGTLTNGALHWRLQKH--GGDFVLAAFDLVEERFKEF-PLPDASTSFRFFGTGVLGDCLCLQFF-K--GKMKEHWIM 263 (339)
Q Consensus 190 ~~~~~v~~~G~lyw~~~~~--~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~l~~~~G~L~~v~~-~--~~~l~iW~l 263 (339)
.....+.++|.+|-++... .....+..||+.+++|+.+ ++|... .....+..+|+|+++.. . ...-++|.+
T Consensus 160 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r---~~~~~~~~~~~iyv~GG~~~~~~~~~v~~y 236 (308)
T 1zgk_A 160 IGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIR---SGAGVCVLHNCIYAAGGYDGQDQLNSVERY 236 (308)
T ss_dssp BSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCC---BSCEEEEETTEEEEECCBCSSSBCCCEEEE
T ss_pred cceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCcc---ccceEEEECCEEEEEeCCCCCCccceEEEE
Confidence 3455688899999997654 1235799999999999988 444433 34456778999999987 2 223456666
Q ss_pred cccCCCCCeEEEEEecCCCCeeEEEEEeCCeEEEEEC------CcEEEEEECCCCcEEEeEE
Q 047931 264 KEYGVKESWTRVFIHQDPNNVWPLCLWKNSTKLLVIN------RKNLLVCDCNNEGSEDVAV 319 (339)
Q Consensus 264 ~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~i~~~~~------~~~~~~yd~~t~~~~~v~~ 319 (339)
+-. ..+|.++..++.+....-.++ .++.|++..+ ...+..||+++++|+.+.-
T Consensus 237 d~~--~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 295 (308)
T 1zgk_A 237 DVE--TETWTFVAPMKHRRSALGITV-HQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTR 295 (308)
T ss_dssp ETT--TTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEE
T ss_pred eCC--CCcEEECCCCCCCccceEEEE-ECCEEEEEcCcCCCcccceEEEEcCCCCEEeecCC
Confidence 642 367998765554331222222 3667777654 1359999999999999843
No 6
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.37 E-value=3.9e-11 Score=104.51 Aligned_cols=191 Identities=11% Similarity=0.049 Sum_probs=127.1
Q ss_pred CEEEEEcccccc---eeecCCCCCCCCCCCCCCeeEEeeeCCceEEEEEee-EeC-CCcEEEEEEeCCCceEEecccCCc
Q 047931 112 KIFFVLNPLTRE---SKRIPDVPFEPFPRSSDDLYGFGCTAEDCKFIKVSF-GLK-PNMSVAIFSLRMNSWRRVLASGYT 186 (339)
Q Consensus 112 ~~~~V~NP~T~~---~~~LP~~~~~~~~~~~~~~~~~g~~~~~ykvv~~~~-~~~-~~~~~~vyss~~~~W~~~~~~~~~ 186 (339)
..++++||.|++ |..+++++.. +... +.....+ +++.+.- ... ....+++|+..++.|+.++.+|..
T Consensus 78 ~~~~~~d~~~~~~~~W~~~~~~p~~---r~~~---~~~~~~~--~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~ 149 (301)
T 2vpj_A 78 SSVECLDYTADEDGVWYSVAPMNVR---RGLA---GATTLGD--MIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTA 149 (301)
T ss_dssp CCEEEEETTCCTTCCCEEECCCSSC---CBSC---EEEEETT--EEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSC
T ss_pred ceEEEEECCCCCCCeeEECCCCCCC---ccce---eEEEECC--EEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCC
Confidence 579999999999 9999887754 1211 1111122 3333330 111 145799999999999999877754
Q ss_pred cCccCCCceEECCeEEEEEecC--CCCeEEEEEECCCceeeee-cCCCCCCCCceeEEEEECCeEEEEEe-C--CCeEEE
Q 047931 187 RPLINVPGTLTNGALHWRLQKH--GGDFVLAAFDLVEERFKEF-PLPDASTSFRFFGTGVLGDCLCLQFF-K--GKMKEH 260 (339)
Q Consensus 187 ~~~~~~~~v~~~G~lyw~~~~~--~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~l~~~~G~L~~v~~-~--~~~l~i 260 (339)
. .....+.++|.+|.++... .....+..||+++++|+.+ ++|... ....++..+|+|+++.. . ...-++
T Consensus 150 r--~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r---~~~~~~~~~~~i~v~GG~~~~~~~~~v 224 (301)
T 2vpj_A 150 R--EGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKR---SGAGVALLNDHIYVVGGFDGTAHLSSV 224 (301)
T ss_dssp C--BSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCC---BSCEEEEETTEEEEECCBCSSSBCCCE
T ss_pred c--ccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCccc---ccceEEEECCEEEEEeCCCCCcccceE
Confidence 3 3455678899999997654 1235799999999999998 455443 34566778999999987 2 113356
Q ss_pred EEEcccCCCCCeEEEEEecCCCCeeEEEEEeCCeEEEEECC------cEEEEEECCCCcEEEeE
Q 047931 261 WIMKEYGVKESWTRVFIHQDPNNVWPLCLWKNSTKLLVINR------KNLLVCDCNNEGSEDVA 318 (339)
Q Consensus 261 W~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~i~~~~~~------~~~~~yd~~t~~~~~v~ 318 (339)
|.++- ...+|..+..++.+......++ .++.|++..+. ..+..||+++++|+.+.
T Consensus 225 ~~yd~--~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 285 (301)
T 2vpj_A 225 EAYNI--RTDSWTTVTSMTTPRCYVGATV-LRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVT 285 (301)
T ss_dssp EEEET--TTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBEEEEEEEETTTTEEEEEE
T ss_pred EEEeC--CCCcEEECCCCCCcccceeEEE-ECCEEEEEcCcCCCcccccEEEEcCCCCeEEEcC
Confidence 66653 2367998866654331222223 36677776542 35999999999999884
No 7
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.33 E-value=1.4e-10 Score=101.31 Aligned_cols=192 Identities=12% Similarity=0.072 Sum_probs=128.0
Q ss_pred CCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEeeeCCceEEEEEe-eEeCCCcEEEEEEeCCCceEEecccCCccCc
Q 047931 111 PKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGCTAEDCKFIKVS-FGLKPNMSVAIFSLRMNSWRRVLASGYTRPL 189 (339)
Q Consensus 111 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~ykvv~~~-~~~~~~~~~~vyss~~~~W~~~~~~~~~~~~ 189 (339)
...+.++||.+++|..+++++.. +....... ..+ +++.+. ........+++|+..++.|+.++.+|...
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~---r~~~~~~~---~~~--~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r-- 92 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEK---RRDAACVF---WDN--VVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPR-- 92 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCC---CBSCEEEE---ETT--EEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCC--
T ss_pred CceEEEecCCCCCEecCCCCCcc---cceeEEEE---ECC--EEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccc--
Confidence 46789999999999999887754 12211111 122 233222 01112568999999999999998777553
Q ss_pred cCCCceEECCeEEEEEecC---CCCeEEEEEECCCceeeee-cCCCCCCCCceeEEEEECCeEEEEEe---CCC----eE
Q 047931 190 INVPGTLTNGALHWRLQKH---GGDFVLAAFDLVEERFKEF-PLPDASTSFRFFGTGVLGDCLCLQFF---KGK----MK 258 (339)
Q Consensus 190 ~~~~~v~~~G~lyw~~~~~---~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~l~~~~G~L~~v~~---~~~----~l 258 (339)
.....+.++|.+|.++... .....+..||+.+++|+.+ ++|... .....+..+|+|+++.. ... .-
T Consensus 93 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r---~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 169 (306)
T 3ii7_A 93 DSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQR---CSHGMVEANGLIYVCGGSLGNNVSGRVLN 169 (306)
T ss_dssp BSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCC---BSCEEEEETTEEEEECCEESCTTTCEECC
T ss_pred cceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCc---ceeEEEEECCEEEEECCCCCCCCcccccc
Confidence 3455678999999997653 2245799999999999998 455443 34566778999999987 211 34
Q ss_pred EEEEEcccCCCCCeEEEEEecCCCCeeEEEEEeCCeEEEEECC------cEEEEEECCCCcEEEeE
Q 047931 259 EHWIMKEYGVKESWTRVFIHQDPNNVWPLCLWKNSTKLLVINR------KNLLVCDCNNEGSEDVA 318 (339)
Q Consensus 259 ~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~i~~~~~~------~~~~~yd~~t~~~~~v~ 318 (339)
++|.++-. ..+|..+..++.+......++ .++.|++..+. ..+..||+++++|+.+.
T Consensus 170 ~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~ 232 (306)
T 3ii7_A 170 SCEVYDPA--TETWTELCPMIEARKNHGLVF-VKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVS 232 (306)
T ss_dssp CEEEEETT--TTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEETTEEBCCEEEEETTTTEEEECC
T ss_pred eEEEeCCC--CCeEEECCCccchhhcceEEE-ECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECC
Confidence 56666642 367998865554332222233 36677776431 24999999999999984
No 8
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.31 E-value=2.7e-10 Score=99.13 Aligned_cols=192 Identities=11% Similarity=0.014 Sum_probs=127.1
Q ss_pred CCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEeeeCCceEEEEEee-E-eCCCcEEEEEEeCCCc---eEEecccCC
Q 047931 111 PKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGCTAEDCKFIKVSF-G-LKPNMSVAIFSLRMNS---WRRVLASGY 185 (339)
Q Consensus 111 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~ykvv~~~~-~-~~~~~~~~vyss~~~~---W~~~~~~~~ 185 (339)
...++++||.|++|..+|+++.. +... +.....+ +++.+.- . ......+++|+..++. |+.++.+|.
T Consensus 30 ~~~~~~~d~~~~~W~~~~~~p~~---r~~~---~~~~~~~--~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~ 101 (301)
T 2vpj_A 30 IDVVEKYDPKTQEWSFLPSITRK---RRYV---ASVSLHD--RIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNV 101 (301)
T ss_dssp CCCEEEEETTTTEEEECCCCSSC---CBSC---EEEEETT--EEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSS
T ss_pred eeEEEEEcCCCCeEEeCCCCChh---hccc---cEEEECC--EEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCC
Confidence 35789999999999999976654 1211 1111122 2333320 1 1124579999999999 999987776
Q ss_pred ccCccCCCceEECCeEEEEEecC--CCCeEEEEEECCCceeeee-cCCCCCCCCceeEEEEECCeEEEEEe-C--CCeEE
Q 047931 186 TRPLINVPGTLTNGALHWRLQKH--GGDFVLAAFDLVEERFKEF-PLPDASTSFRFFGTGVLGDCLCLQFF-K--GKMKE 259 (339)
Q Consensus 186 ~~~~~~~~~v~~~G~lyw~~~~~--~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~l~~~~G~L~~v~~-~--~~~l~ 259 (339)
.. .....+.++|.+|.++... .....+..||+.+++|+.+ ++|... .....+..+|+|+++.. . ...-+
T Consensus 102 ~r--~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r---~~~~~~~~~~~iyv~GG~~~~~~~~~ 176 (301)
T 2vpj_A 102 RR--GLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAR---EGAGLVVASGVIYCLGGYDGLNILNS 176 (301)
T ss_dssp CC--BSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCC---BSCEEEEETTEEEEECCBCSSCBCCC
T ss_pred Cc--cceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCc---ccceEEEECCEEEEECCCCCCcccce
Confidence 53 3455688899999997654 1235799999999999998 455443 34556778999999987 2 12335
Q ss_pred EEEEcccCCCCCeEEEEEecCCCCeeEEEEEeCCeEEEEECC------cEEEEEECCCCcEEEeE
Q 047931 260 HWIMKEYGVKESWTRVFIHQDPNNVWPLCLWKNSTKLLVINR------KNLLVCDCNNEGSEDVA 318 (339)
Q Consensus 260 iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~i~~~~~~------~~~~~yd~~t~~~~~v~ 318 (339)
+|.++-. ..+|..+..++.+..... ++..++.|++..+. ..+..||+++++|+.+.
T Consensus 177 ~~~~d~~--~~~W~~~~~~p~~r~~~~-~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 238 (301)
T 2vpj_A 177 VEKYDPH--TGHWTNVTPMATKRSGAG-VALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVT 238 (301)
T ss_dssp EEEEETT--TTEEEEECCCSSCCBSCE-EEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred EEEEeCC--CCcEEeCCCCCcccccce-EEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECC
Confidence 6666642 367998865554331222 22336677776542 35999999999999984
No 9
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.30 E-value=2.2e-10 Score=99.76 Aligned_cols=191 Identities=15% Similarity=0.122 Sum_probs=126.7
Q ss_pred CEEEEEcccccceeecCCCCCCCCCCCCCCeeEEeeeCCceEEEEEee-E-eCCCcEEEEEEeCCCceEEecccCCccCc
Q 047931 112 KIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGCTAEDCKFIKVSF-G-LKPNMSVAIFSLRMNSWRRVLASGYTRPL 189 (339)
Q Consensus 112 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~ykvv~~~~-~-~~~~~~~~vyss~~~~W~~~~~~~~~~~~ 189 (339)
..+.++||.+++|..+++++.. +....... ..+ +++.+.- . ......+++|+..++.|+.++.+|...
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~---r~~~~~~~---~~~--~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r-- 99 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSR---RCRAGMVY---MAG--LVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRR-- 99 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSC---CBSCEEEE---ETT--EEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCC--
T ss_pred CcEEEEcCcCCcEeEcccCCcc---cccceEEE---ECC--EEEEEeCcCCCccccceEEECCCCCceeeCCCCCccc--
Confidence 5688999999999999877654 12111111 112 2333320 1 112457899999999999998777653
Q ss_pred cCCCceEECCeEEEEEecCC--CCeEEEEEECCCceeeee-cCCCCCCCCceeEEEEECCeEEEEEe-C-CC---eEEEE
Q 047931 190 INVPGTLTNGALHWRLQKHG--GDFVLAAFDLVEERFKEF-PLPDASTSFRFFGTGVLGDCLCLQFF-K-GK---MKEHW 261 (339)
Q Consensus 190 ~~~~~v~~~G~lyw~~~~~~--~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~l~~~~G~L~~v~~-~-~~---~l~iW 261 (339)
.....+.++|.+|.++...+ ....+..||+.+++|+.+ ++|... .....+..+|+|+++.. . .. .-++|
T Consensus 100 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r---~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 176 (302)
T 2xn4_A 100 STLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRR---SSVGVGVVGGLLYAVGGYDVASRQCLSTVE 176 (302)
T ss_dssp BSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCC---BSCEEEEETTEEEEECCEETTTTEECCCEE
T ss_pred cceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcc---cCceEEEECCEEEEEeCCCCCCCccccEEE
Confidence 34556788999999987651 235789999999999998 444433 34566778999999987 2 11 23466
Q ss_pred EEcccCCCCCeEEEEEecCCCCeeEEEEEeCCeEEEEECC------cEEEEEECCCCcEEEeE
Q 047931 262 IMKEYGVKESWTRVFIHQDPNNVWPLCLWKNSTKLLVINR------KNLLVCDCNNEGSEDVA 318 (339)
Q Consensus 262 ~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~i~~~~~~------~~~~~yd~~t~~~~~v~ 318 (339)
.++-. ..+|..+..++.+......++ .++.|++..+. ..+..||+++++|+.+.
T Consensus 177 ~yd~~--~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 236 (302)
T 2xn4_A 177 CYNAT--TNEWTYIAEMSTRRSGAGVGV-LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVA 236 (302)
T ss_dssp EEETT--TTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBSSSSBCCCEEEEETTTTEEEEEC
T ss_pred EEeCC--CCcEEECCCCccccccccEEE-ECCEEEEECCCCCCcccceEEEEeCCCCCEeeCC
Confidence 66642 367998866654332222233 36677776542 25999999999999984
No 10
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.29 E-value=9.1e-11 Score=102.62 Aligned_cols=192 Identities=13% Similarity=0.088 Sum_probs=125.8
Q ss_pred CCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEeeeCCceEEEEEeeE------eCCCcEEEEEEeCCCceEEecccC
Q 047931 111 PKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGCTAEDCKFIKVSFG------LKPNMSVAIFSLRMNSWRRVLASG 184 (339)
Q Consensus 111 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~ykvv~~~~~------~~~~~~~~vyss~~~~W~~~~~~~ 184 (339)
...+.++||.|++|..+++++.. +... +.....+ +++.+.-. ......+++|+..++.|+.++.+|
T Consensus 38 ~~~~~~~d~~~~~W~~~~~~p~~---r~~~---~~~~~~~--~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p 109 (308)
T 1zgk_A 38 LSYLEAYNPSNGTWLRLADLQVP---RSGL---AGCVVGG--LLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMS 109 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSC---CBSC---EEEEETT--EEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCS
T ss_pred cceEEEEcCCCCeEeECCCCCcc---cccc---eEEEECC--EEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCC
Confidence 35789999999999999877654 1211 1111112 22222200 111457899999999999998777
Q ss_pred CccCccCCCceEECCeEEEEEecCC--CCeEEEEEECCCceeeee-cCCCCCCCCceeEEEEECCeEEEEEe-C--CCeE
Q 047931 185 YTRPLINVPGTLTNGALHWRLQKHG--GDFVLAAFDLVEERFKEF-PLPDASTSFRFFGTGVLGDCLCLQFF-K--GKMK 258 (339)
Q Consensus 185 ~~~~~~~~~~v~~~G~lyw~~~~~~--~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~l~~~~G~L~~v~~-~--~~~l 258 (339)
... .....+.++|.+|.++...+ ....+..||+.+++|+.+ ++|... .....+..+|+|+++.. . ...-
T Consensus 110 ~~r--~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r---~~~~~~~~~~~iyv~GG~~~~~~~~ 184 (308)
T 1zgk_A 110 VPR--NRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRR---IGVGVAVLNRLLYAVGGFDGTNRLN 184 (308)
T ss_dssp SCC--BTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCC---BSCEEEEETTEEEEECCBCSSCBCC
T ss_pred cCc--cccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccc---cceEEEEECCEEEEEeCCCCCCcCc
Confidence 653 34456788999999976431 134689999999999998 455443 34456777999999987 2 1123
Q ss_pred EEEEEcccCCCCCeEEEEEecCCCCeeEEEEEeCCeEEEEECC------cEEEEEECCCCcEEEeE
Q 047931 259 EHWIMKEYGVKESWTRVFIHQDPNNVWPLCLWKNSTKLLVINR------KNLLVCDCNNEGSEDVA 318 (339)
Q Consensus 259 ~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~i~~~~~~------~~~~~yd~~t~~~~~v~ 318 (339)
++|.++- ...+|..+..++.+......++ -++.|++..+. ..+..||+++++|+.+.
T Consensus 185 ~~~~yd~--~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 247 (308)
T 1zgk_A 185 SAECYYP--ERNEWRMITAMNTIRSGAGVCV-LHNCIYAAGGYDGQDQLNSVERYDVETETWTFVA 247 (308)
T ss_dssp CEEEEET--TTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTEEEECC
T ss_pred eEEEEeC--CCCeEeeCCCCCCccccceEEE-ECCEEEEEeCCCCCCccceEEEEeCCCCcEEECC
Confidence 4666653 2367998765554331222233 36677776542 35999999999999984
No 11
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.21 E-value=1.7e-09 Score=94.70 Aligned_cols=194 Identities=9% Similarity=0.007 Sum_probs=123.5
Q ss_pred CEEEEEcccccceeecCCCCCCCCCCCCCCeeEEeeeCCceEEEEEeeEe----CC--CcEEEEEEeCCCceEEecccCC
Q 047931 112 KIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGCTAEDCKFIKVSFGL----KP--NMSVAIFSLRMNSWRRVLASGY 185 (339)
Q Consensus 112 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~ykvv~~~~~~----~~--~~~~~vyss~~~~W~~~~~~~~ 185 (339)
+.+.++||.|++|.. ++.+.+ .++. ..+.....+..-|+.-.... .. ...+++|+..+++|+.++.+|.
T Consensus 13 ~~~~~yd~~~~~W~~-~~~~~p-~~r~---~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~ 87 (315)
T 4asc_A 13 EGAVAYDPAANECYC-ASLSSQ-VPKN---HVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPS 87 (315)
T ss_dssp TEEEEEETTTTEEEE-EECCCC-SCSS---EEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSS
T ss_pred CceEEECCCCCeEec-CCCCCC-CCcc---ceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCc
Confidence 689999999999986 443322 0111 11222122222222221000 01 2348899999999999988775
Q ss_pred ccCccCCCceEECCeEEEEEecC-----CCCeEEEEEECCCceeeee-cCCCCCCCCceeEEEEECCeEEEEEeC----C
Q 047931 186 TRPLINVPGTLTNGALHWRLQKH-----GGDFVLAAFDLVEERFKEF-PLPDASTSFRFFGTGVLGDCLCLQFFK----G 255 (339)
Q Consensus 186 ~~~~~~~~~v~~~G~lyw~~~~~-----~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~l~~~~G~L~~v~~~----~ 255 (339)
.. .....+.++|.+|.++... .....+..||+.+++|+.+ ++|... .....+..+|+|+++... .
T Consensus 88 ~r--~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r---~~~~~~~~~~~iyv~GG~~~~~~ 162 (315)
T 4asc_A 88 PR--CLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVV---YGHTVLSHMDLVYVIGGKGSDRK 162 (315)
T ss_dssp CE--ESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCC---BSCEEEEETTEEEEECCBCTTSC
T ss_pred ch--hceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcc---cceeEEEECCEEEEEeCCCCCCc
Confidence 53 3455688999999998742 1235689999999999988 555543 345667789999999872 1
Q ss_pred CeEEEEEEcccCCCCCeEEEEEecCCCCeeEEEEEeCCeEEEEECC------cEEEEEECCCCcEEEeE
Q 047931 256 KMKEHWIMKEYGVKESWTRVFIHQDPNNVWPLCLWKNSTKLLVINR------KNLLVCDCNNEGSEDVA 318 (339)
Q Consensus 256 ~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~i~~~~~~------~~~~~yd~~t~~~~~v~ 318 (339)
..-++|.++-. ..+|..+..++.+......++ -++.|++..+. ..+..||+++++|+.+.
T Consensus 163 ~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 228 (315)
T 4asc_A 163 CLNKMCVYDPK--KFEWKELAPMQTARSLFGATV-HDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFE 228 (315)
T ss_dssp BCCCEEEEETT--TTEEEECCCCSSCCBSCEEEE-ETTEEEEEEEECSSSEEEEEEEEETTTTEEEEEC
T ss_pred ccceEEEEeCC--CCeEEECCCCCCchhceEEEE-ECCEEEEEeccCCCCccceEEEEECCCCeEEECC
Confidence 22356777642 367998766654431222223 36677776531 25999999999999984
No 12
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.11 E-value=8.6e-09 Score=91.83 Aligned_cols=207 Identities=12% Similarity=0.035 Sum_probs=125.3
Q ss_pred CceEEEcc--CCCEEEEEccc--ccceeecCCCC-CCCCCCCCCCeeEEeeeCCceEEEEEeeE-e------CCCcEEEE
Q 047931 102 NGLVCTTP--KPKIFFVLNPL--TRESKRIPDVP-FEPFPRSSDDLYGFGCTAEDCKFIKVSFG-L------KPNMSVAI 169 (339)
Q Consensus 102 ~GLl~~~~--~~~~~~V~NP~--T~~~~~LP~~~-~~~~~~~~~~~~~~g~~~~~ykvv~~~~~-~------~~~~~~~v 169 (339)
+|.|.+.. ..+.++++||. +++|..+|+++ .. +....... ..+ ++..+.-. . .....+++
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~---R~~~~~~~---~~~--~lyv~GG~~~~~~~~~~~~~~v~~ 90 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGP---RDQATSAF---IDG--NLYVFGGIGKNSEGLTQVFNDVHK 90 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCC---CBSCEEEE---ETT--EEEEECCEEECTTSCEEECCCEEE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCc---CccceEEE---ECC--EEEEEcCCCCCCCccceeeccEEE
Confidence 55553321 24579999998 48999999877 33 12211111 122 22222201 1 11467999
Q ss_pred EEeCCCceEEecccCCccCccCCCceEECCeEEEEEecC-C-----------------------------------CCeE
Q 047931 170 FSLRMNSWRRVLASGYTRPLINVPGTLTNGALHWRLQKH-G-----------------------------------GDFV 213 (339)
Q Consensus 170 yss~~~~W~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~-~-----------------------------------~~~~ 213 (339)
|+..+++|+.++.++ +.......++.++|.+|.++... . ....
T Consensus 91 yd~~~~~W~~~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (357)
T 2uvk_A 91 YNPKTNSWVKLMSHA-PMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKF 169 (357)
T ss_dssp EETTTTEEEECSCCC-SSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCE
T ss_pred EeCCCCcEEECCCCC-CcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCccc
Confidence 999999999998776 22233344577999999998653 1 1248
Q ss_pred EEEEECCCceeeee-cCCCCCCCCceeEEEEECCeEEEEEe-C-C--CeEEEEEEcccCCCCCeEEEEEecCCCC-eeEE
Q 047931 214 LAAFDLVEERFKEF-PLPDASTSFRFFGTGVLGDCLCLQFF-K-G--KMKEHWIMKEYGVKESWTRVFIHQDPNN-VWPL 287 (339)
Q Consensus 214 il~fD~~~~~~~~i-~lP~~~~~~~~~~l~~~~G~L~~v~~-~-~--~~l~iW~l~~~~~~~~W~~~~~i~~~~~-~~~~ 287 (339)
+..||+.+++|+.+ ++|.... ....++..+|+|+++.. . . ..-++|.++-.....+|..+..++.+.. ....
T Consensus 170 v~~yd~~~~~W~~~~~~p~~~~--~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~ 247 (357)
T 2uvk_A 170 LLSFDPSTQQWSYAGESPWYGT--AGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGF 247 (357)
T ss_dssp EEEEETTTTEEEEEEECSSCCC--BSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCE
T ss_pred EEEEeCCCCcEEECCCCCCCCc--ccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccce
Confidence 99999999999998 5554332 22567788999999987 1 1 1335666652112467998766643321 1222
Q ss_pred EEEeCCeEEEEECC-----------------------cEEEEEECCCCcEEEeEE
Q 047931 288 CLWKNSTKLLVINR-----------------------KNLLVCDCNNEGSEDVAV 319 (339)
Q Consensus 288 ~~~~~~~i~~~~~~-----------------------~~~~~yd~~t~~~~~v~~ 319 (339)
++..++.|++..+. ..+..||+++++|+.+.-
T Consensus 248 ~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~ 302 (357)
T 2uvk_A 248 AGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGE 302 (357)
T ss_dssp EEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEE
T ss_pred EEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCC
Confidence 33346677776541 147899999999999853
No 13
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=99.10 E-value=1e-11 Score=105.97 Aligned_cols=48 Identities=21% Similarity=0.531 Sum_probs=45.7
Q ss_pred CCCCcHHHHHHHHccCCcccce-eeeeccccccccCCChHHHHHHhccc
Q 047931 1 MATIPHEIIFEILLRLPVKSLC-RFKCVSSSWLALISDPQFVMLQLHRN 48 (339)
Q Consensus 1 ~~~Lp~Dll~eIL~rLP~~~l~-r~~~VcK~W~~li~sp~F~~~~~~~~ 48 (339)
|+.||+|+|.+||++||+++|+ ||++|||+|++++++|.|.+.++.+.
T Consensus 51 ~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~ 99 (297)
T 2e31_A 51 LAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQE 99 (297)
T ss_dssp TTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHT
T ss_pred hhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhcc
Confidence 4689999999999999999999 99999999999999999999998876
No 14
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.10 E-value=8.4e-12 Score=78.55 Aligned_cols=41 Identities=24% Similarity=0.448 Sum_probs=38.3
Q ss_pred CCCCcHHHHHHHHccCCcccceeeeeccccccccCCChHHH
Q 047931 1 MATIPHEIIFEILLRLPVKSLCRFKCVSSSWLALISDPQFV 41 (339)
Q Consensus 1 ~~~Lp~Dll~eIL~rLP~~~l~r~~~VcK~W~~li~sp~F~ 41 (339)
++.||+|++.+||++||++++.++++|||+|++++.++.|-
T Consensus 9 ~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW 49 (53)
T 1fs1_A 9 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLW 49 (53)
T ss_dssp CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC
T ss_pred HHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHH
Confidence 46899999999999999999999999999999999998864
No 15
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.10 E-value=1.4e-08 Score=89.11 Aligned_cols=194 Identities=9% Similarity=0.037 Sum_probs=121.6
Q ss_pred CEEEEEcccccceeecCCCCCCCCCCCCCCeeEEeeeCCceEEEEEee-Ee-C--C--CcEEEEEEeCCCceEEecccCC
Q 047931 112 KIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGCTAEDCKFIKVSF-GL-K--P--NMSVAIFSLRMNSWRRVLASGY 185 (339)
Q Consensus 112 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~ykvv~~~~-~~-~--~--~~~~~vyss~~~~W~~~~~~~~ 185 (339)
....++||.|++|...|.+... ++. ..+.....+..-|+.-.. .. . . ...+++|+..++.|+.++.+|.
T Consensus 24 ~~~~~yd~~~~~W~~~~~~~~~--~r~---~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~ 98 (318)
T 2woz_A 24 TAAVAYDPMENECYLTALAEQI--PRN---HSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPS 98 (318)
T ss_dssp SEEEEEETTTTEEEEEEECTTS--CSS---EEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSS
T ss_pred cceEEECCCCCceecccCCccC--Ccc---ceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCc
Confidence 4578999999999884432111 111 111111122211221100 00 0 1 2248999999999999987776
Q ss_pred ccCccCCCceEECCeEEEEEecC----CCCeEEEEEECCCceeeee-cCCCCCCCCceeEEEEECCeEEEEEe--CC--C
Q 047931 186 TRPLINVPGTLTNGALHWRLQKH----GGDFVLAAFDLVEERFKEF-PLPDASTSFRFFGTGVLGDCLCLQFF--KG--K 256 (339)
Q Consensus 186 ~~~~~~~~~v~~~G~lyw~~~~~----~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~l~~~~G~L~~v~~--~~--~ 256 (339)
.. .....+.++|.+|.++... .....+..||+.+++|+.+ ++|... .....+..+|+|+++.. .. .
T Consensus 99 ~r--~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r---~~~~~~~~~~~iyv~GG~~~~~~~ 173 (318)
T 2woz_A 99 AR--CLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKV---YGHNVISHNGMIYCLGGKTDDKKC 173 (318)
T ss_dssp CB--CSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCE---ESCEEEEETTEEEEECCEESSSCB
T ss_pred cc--cccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcc---cccEEEEECCEEEEEcCCCCCCCc
Confidence 53 3445688999999998763 1235799999999999998 555543 34456678999999987 11 2
Q ss_pred eEEEEEEcccCCCCCeEEEEEecCCCCeeEEEEEeCCeEEEEECC------cEEEEEECCCCcEEEeE
Q 047931 257 MKEHWIMKEYGVKESWTRVFIHQDPNNVWPLCLWKNSTKLLVINR------KNLLVCDCNNEGSEDVA 318 (339)
Q Consensus 257 ~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~i~~~~~~------~~~~~yd~~t~~~~~v~ 318 (339)
.-++|.++-. ..+|..+..++.+......++ -++.|++..+. ..+..||+++++|+.+.
T Consensus 174 ~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 238 (318)
T 2woz_A 174 TNRVFIYNPK--KGDWKDLAPMKTPRSMFGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMT 238 (318)
T ss_dssp CCCEEEEETT--TTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECC
T ss_pred cceEEEEcCC--CCEEEECCCCCCCcccceEEE-ECCEEEEEcCcCCCCccceEEEEECCCCeEEECC
Confidence 2356777642 367998765554332222333 36677776531 24889999999999984
No 16
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.97 E-value=1.9e-07 Score=85.49 Aligned_cols=235 Identities=9% Similarity=-0.011 Sum_probs=121.0
Q ss_pred CCCCcHHHHHHHHccCCcccceeeeeccccccccCCChHHHHHHhcccCCC-cEEEecCCCccccCCCccccc-------
Q 047931 1 MATIPHEIIFEILLRLPVKSLCRFKCVSSSWLALISDPQFVMLQLHRNKRR-NLILSNLSGNSAYNYSIDEEK------- 72 (339)
Q Consensus 1 ~~~Lp~Dll~eIL~rLP~~~l~r~~~VcK~W~~li~sp~F~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~------- 72 (339)
++.||+|++.+||+.|++++|.++++|||+|+.++.++.+-+......... +.................+..
T Consensus 19 ~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wk~~~~~~~~ 98 (445)
T 2ovr_B 19 ISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYIRQHR 98 (445)
T ss_dssp TTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTTTTCCSCCCCCC--CCSSCCCCCHHHHHHHHHHH
T ss_pred hHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheeecccccccccccceecCCCccCCcHHHHHhhhhh
Confidence 467999999999999999999999999999999999998877655433211 110000000000000000000
Q ss_pred --ceeeeecC-C--CCcCCCCCCCCceeEEEeeeCceEEEccCCCEEEEEcccccceee-cCCCCCCCCCCCCCCeeEEe
Q 047931 73 --LVSVELDF-P--LEQDANRDGSGYLARIVGSCNGLVCTTPKPKIFFVLNPLTRESKR-IPDVPFEPFPRSSDDLYGFG 146 (339)
Q Consensus 73 --~~~~~~~~-~--~~~~~~~~~~~~~~~~~~s~~GLl~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~g 146 (339)
..+..... + ......... ...+...+.+++....++.+.|+|..+++... ++..... ...+.
T Consensus 99 ~~~~w~~~~~~~~~~l~~h~~~v----~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~--------v~~~~ 166 (445)
T 2ovr_B 99 IDTNWRRGELKSPKVLKGHDDHV----ITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG--------VWSSQ 166 (445)
T ss_dssp HHHHHHHSCCCCCEEEECSTTSC----EEEEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSC--------EEEEE
T ss_pred hhhcccCCCcceeEEecccCCCc----EEEEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCC--------EEEEE
Confidence 00000000 0 000001111 23344455566555567889999998887543 2211111 33333
Q ss_pred eeCCceEEEEEeeEeCCCcEEEEEEeCCCceEEecccCCccCccCCCceEECCeEEEEEecCCCCeEEEEEECCCceee-
Q 047931 147 CTAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRVLASGYTRPLINVPGTLTNGALHWRLQKHGGDFVLAAFDLVEERFK- 225 (339)
Q Consensus 147 ~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~~~~~- 225 (339)
+. +.+-+.+- ....+.+++..++.-... +.... ..-..+..+|.....+..+ ..|..+|+.+.+..
T Consensus 167 ~~-~~~l~s~~-----~dg~i~vwd~~~~~~~~~--~~~h~--~~v~~~~~~~~~l~s~s~d---g~i~~wd~~~~~~~~ 233 (445)
T 2ovr_B 167 MR-DNIIISGS-----TDRTLKVWNAETGECIHT--LYGHT--STVRCMHLHEKRVVSGSRD---ATLRVWDIETGQCLH 233 (445)
T ss_dssp EE-TTEEEEEE-----TTSCEEEEETTTTEEEEE--ECCCS--SCEEEEEEETTEEEEEETT---SEEEEEESSSCCEEE
T ss_pred ec-CCEEEEEe-----CCCeEEEEECCcCcEEEE--ECCCC--CcEEEEEecCCEEEEEeCC---CEEEEEECCCCcEEE
Confidence 32 33222221 245678888877633221 11110 0112344455544444433 58889998876543
Q ss_pred eecCCCCCCCCceeEEEEECCeEEEEEeCCCeEEEEEEcc
Q 047931 226 EFPLPDASTSFRFFGTGVLGDCLCLQFFKGKMKEHWIMKE 265 (339)
Q Consensus 226 ~i~lP~~~~~~~~~~l~~~~G~L~~v~~~~~~l~iW~l~~ 265 (339)
.+..... ...-...+|...++...+..+.+|.++.
T Consensus 234 ~~~~~~~-----~v~~~~~~~~~l~~~~~dg~i~iwd~~~ 268 (445)
T 2ovr_B 234 VLMGHVA-----AVRCVQYDGRRVVSGAYDFMVKVWDPET 268 (445)
T ss_dssp EEECCSS-----CEEEEEECSSCEEEEETTSCEEEEEGGG
T ss_pred EEcCCcc-----cEEEEEECCCEEEEEcCCCEEEEEECCC
Confidence 2322111 1222233777777777788899998764
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.95 E-value=3.9e-08 Score=95.44 Aligned_cols=197 Identities=12% Similarity=0.060 Sum_probs=121.5
Q ss_pred CEEEEEcccccceeecC-CCCCCC--CCCCCCCeeEEeee-CCceEEEEEee-EeC--CCcEEEEEEeCCCceEEecccC
Q 047931 112 KIFFVLNPLTRESKRIP-DVPFEP--FPRSSDDLYGFGCT-AEDCKFIKVSF-GLK--PNMSVAIFSLRMNSWRRVLASG 184 (339)
Q Consensus 112 ~~~~V~NP~T~~~~~LP-~~~~~~--~~~~~~~~~~~g~~-~~~ykvv~~~~-~~~--~~~~~~vyss~~~~W~~~~~~~ 184 (339)
+.++++||.|++|..++ +.+... .++.......+ . .+ +++.+.- ... ....+++|+..++.|+.++.+|
T Consensus 412 ~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~--~~~~--~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p 487 (695)
T 2zwa_A 412 NEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTI--SRNN--QLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLS 487 (695)
T ss_dssp CCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEE--TTTT--EEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCS
T ss_pred CcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEE--ccCC--EEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCC
Confidence 56899999999999998 532111 11122111111 1 22 2333330 111 1357999999999999998877
Q ss_pred CccCccCCCceEE-CCeEEEEEecCCCCeEEEEEECCCceeeeec----CCCCCCCCceeEEEEEC---CeEEEEEeC--
Q 047931 185 YTRPLINVPGTLT-NGALHWRLQKHGGDFVLAAFDLVEERFKEFP----LPDASTSFRFFGTGVLG---DCLCLQFFK-- 254 (339)
Q Consensus 185 ~~~~~~~~~~v~~-~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~----lP~~~~~~~~~~l~~~~---G~L~~v~~~-- 254 (339)
... ....++.+ +|.+|.+++..+.. .+..||+.+++|+.++ +|... .....++++ |+|+++++.
T Consensus 488 ~~R--~~h~~~~~~~~~iyv~GG~~~~~-~v~~yd~~t~~W~~~~~~g~~p~~r---~~~~a~v~~~~~~~iyv~GG~~~ 561 (695)
T 2zwa_A 488 HTR--FRHSACSLPDGNVLILGGVTEGP-AMLLYNVTEEIFKDVTPKDEFFQNS---LVSAGLEFDPVSKQGIILGGGFM 561 (695)
T ss_dssp BCC--BSCEEEECTTSCEEEECCBCSSC-SEEEEETTTTEEEECCCSSGGGGSC---CBSCEEEEETTTTEEEEECCBCT
T ss_pred CCc--ccceEEEEcCCEEEEECCCCCCC-CEEEEECCCCceEEccCCCCCCCcc---cceeEEEEeCCCCEEEEECCcCC
Confidence 653 34445665 99999998765222 7999999999999986 34333 223333434 899999872
Q ss_pred C---CeEEEEEEcccCCCCC------eEEEEEecC-CCCeeEEEEEeCCeEEEEEC---------CcEEEEEECCCCcEE
Q 047931 255 G---KMKEHWIMKEYGVKES------WTRVFIHQD-PNNVWPLCLWKNSTKLLVIN---------RKNLLVCDCNNEGSE 315 (339)
Q Consensus 255 ~---~~l~iW~l~~~~~~~~------W~~~~~i~~-~~~~~~~~~~~~~~i~~~~~---------~~~~~~yd~~t~~~~ 315 (339)
. ..-++|.++-. ..+ |..+..++. +......++.+++.|++..+ ...+..||+++++|+
T Consensus 562 ~~~~~~~~v~~yd~~--~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 562 DQTTVSDKAIIFKYD--AENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLT 639 (695)
T ss_dssp TSSCBCCEEEEEEEC--TTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEE
T ss_pred CCCeeeCcEEEEEcc--CCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEE
Confidence 1 12355655532 244 888777532 22123334444477777654 124999999999999
Q ss_pred EeEEe
Q 047931 316 DVAVA 320 (339)
Q Consensus 316 ~v~~~ 320 (339)
.+.+.
T Consensus 640 ~~~~p 644 (695)
T 2zwa_A 640 SIPIS 644 (695)
T ss_dssp ECCCC
T ss_pred Eeecc
Confidence 76543
No 18
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.91 E-value=7.8e-08 Score=85.60 Aligned_cols=148 Identities=9% Similarity=-0.001 Sum_probs=94.5
Q ss_pred cEEEEEEeCCCceEEecccCCccCccCCCceEECCeEEEEEecC-C--CCeEEEEEEC--CCceeeee-cCCCCCCCCce
Q 047931 165 MSVAIFSLRMNSWRRVLASGYTRPLINVPGTLTNGALHWRLQKH-G--GDFVLAAFDL--VEERFKEF-PLPDASTSFRF 238 (339)
Q Consensus 165 ~~~~vyss~~~~W~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~-~--~~~~il~fD~--~~~~~~~i-~lP~~~~~~~~ 238 (339)
..+++|+..++.|+.++.+|... ......+.++|.+|.++... . ....+..||+ ++++|+.+ ++|..... ..
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~-~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~-~~ 245 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYG-TAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGV-AG 245 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCC-CBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCC-BS
T ss_pred ccEEEEeCCCCcEEECCCCCCCC-cccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCccc-cc
Confidence 58999999999999998777542 12245688999999997543 1 1235677776 89999987 44433221 34
Q ss_pred eEEEEECCeEEEEEe-C-C------------------CeEEEEEEcccCCCCCeEEEEEecCCCCeeEEEEEeCCeEEEE
Q 047931 239 FGTGVLGDCLCLQFF-K-G------------------KMKEHWIMKEYGVKESWTRVFIHQDPNNVWPLCLWKNSTKLLV 298 (339)
Q Consensus 239 ~~l~~~~G~L~~v~~-~-~------------------~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~i~~~ 298 (339)
..++..+|+|+++.. . . ...++|.++- ...+|.++..++.+... ..++..++.|++.
T Consensus 246 ~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~--~~~~W~~~~~~p~~r~~-~~~~~~~~~i~v~ 322 (357)
T 2uvk_A 246 GFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLW--HNGKWDKSGELSQGRAY-GVSLPWNNSLLII 322 (357)
T ss_dssp CEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEEC--C---CEEEEECSSCCBS-SEEEEETTEEEEE
T ss_pred ceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEec--CCCceeeCCCCCCCccc-ceeEEeCCEEEEE
Confidence 457788999999987 1 1 1134555553 23679998777664322 2233346777776
Q ss_pred ECC-------cEEEEEECCCCcEEEe
Q 047931 299 INR-------KNLLVCDCNNEGSEDV 317 (339)
Q Consensus 299 ~~~-------~~~~~yd~~t~~~~~v 317 (339)
.+. ..++.+++++++|...
T Consensus 323 GG~~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 323 GGETAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp EEECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred eeeCCCCCEeeeEEEEEEcCcEeEee
Confidence 541 2488999999998876
No 19
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.82 E-value=5.7e-06 Score=75.88 Aligned_cols=43 Identities=21% Similarity=0.331 Sum_probs=38.0
Q ss_pred CCCcHHHHHHHHccCCcccceeeeeccccccccCCC-hHHHHHH
Q 047931 2 ATIPHEIIFEILLRLPVKSLCRFKCVSSSWLALISD-PQFVMLQ 44 (339)
Q Consensus 2 ~~Lp~Dll~eIL~rLP~~~l~r~~~VcK~W~~li~s-p~F~~~~ 44 (339)
+.||+|++.+||+.||+++|.+++.|||+|+.++.+ +..-+.+
T Consensus 16 ~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~~~ 59 (464)
T 3v7d_B 16 TSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWKKL 59 (464)
T ss_dssp HHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHHHH
T ss_pred HHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 359999999999999999999999999999999998 6554443
No 20
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.77 E-value=3.4e-07 Score=83.59 Aligned_cols=280 Identities=13% Similarity=0.063 Sum_probs=138.0
Q ss_pred CCCcHH----HHHHHHccCCcccceeeeeccccccccCCChHHHHHHhcccCCC-c-------------EEEec-CCCcc
Q 047931 2 ATIPHE----IIFEILLRLPVKSLCRFKCVSSSWLALISDPQFVMLQLHRNKRR-N-------------LILSN-LSGNS 62 (339)
Q Consensus 2 ~~Lp~D----ll~eIL~rLP~~~l~r~~~VcK~W~~li~sp~F~~~~~~~~~~~-~-------------l~~~~-~~~~~ 62 (339)
+.||+| ++..||+.|++++|.++++|||+|+.+++++.+-+....+.... + .++.. .....
T Consensus 12 ~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 91 (435)
T 1p22_A 12 TALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWRGLAERRGWGQYLFKNKPPDGN 91 (435)
T ss_dssp HHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHSSSGGGGCC--------
T ss_pred HHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcCcchhhhhhhhccchhhhhhccCCCCCC
Confidence 459999 99999999999999999999999999998877655544332110 0 01110 00000
Q ss_pred ccCCCcc---cc---------cceeeeecC---CCCc-CCCCCCCCceeEEEeeeCceEEEccCCCEEEEEcccccceee
Q 047931 63 AYNYSID---EE---------KLVSVELDF---PLEQ-DANRDGSGYLARIVGSCNGLVCTTPKPKIFFVLNPLTRESKR 126 (339)
Q Consensus 63 ~~~~~~~---~~---------~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~s~~GLl~~~~~~~~~~V~NP~T~~~~~ 126 (339)
....... .. ...+..... .+.. ...... +..+...+..+.....++.+.|+|..|++...
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~----v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~ 167 (435)
T 1p22_A 92 APPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHCRSETSKG----VYCLQYDDQKIVSGLRDNTIKIWDKNTLECKR 167 (435)
T ss_dssp -CCSHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEECCCSSCCC----EEEEECCSSEEEEEESSSCEEEEESSSCCEEE
T ss_pred CCchhhHHhhhhhhhcchhHHHhhhccCCccceEEecccCCCCc----EEEEEECCCEEEEEeCCCeEEEEeCCCCeEEE
Confidence 0000000 00 000000000 0000 000111 23344444455444456789999998877543
Q ss_pred cCCCCCCCCCCCCCCeeEEeeeCCceEEEEEeeEeCCCcEEEEEEeCCCceEEecccCCccCccCCCceEECCeEEEEEe
Q 047931 127 IPDVPFEPFPRSSDDLYGFGCTAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRVLASGYTRPLINVPGTLTNGALHWRLQ 206 (339)
Q Consensus 127 LP~~~~~~~~~~~~~~~~~g~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~v~~~G~lyw~~~ 206 (339)
.-..+.. ....+.+ .+.+-+.+- ..-.+.+++..++.-... +... ......+.+++.....+.
T Consensus 168 ~~~~h~~-------~v~~l~~-~~~~l~sg~-----~dg~i~vwd~~~~~~~~~--~~~h--~~~v~~l~~~~~~l~s~s 230 (435)
T 1p22_A 168 ILTGHTG-------SVLCLQY-DERVIITGS-----SDSTVRVWDVNTGEMLNT--LIHH--CEAVLHLRFNNGMMVTCS 230 (435)
T ss_dssp EECCCSS-------CEEEEEC-CSSEEEEEE-----TTSCEEEEESSSCCEEEE--ECCC--CSCEEEEECCTTEEEEEE
T ss_pred EEcCCCC-------cEEEEEE-CCCEEEEEc-----CCCeEEEEECCCCcEEEE--EcCC--CCcEEEEEEcCCEEEEee
Confidence 3221111 1334443 233332222 245688888877643222 1111 011123444555444443
Q ss_pred cCCCCeEEEEEECCCceeeee-cCCCCCCCCceeEEEEECCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecCC-CCe
Q 047931 207 KHGGDFVLAAFDLVEERFKEF-PLPDASTSFRFFGTGVLGDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQDP-NNV 284 (339)
Q Consensus 207 ~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~l~~~~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~-~~~ 284 (339)
.+ ..|..+|+.+.+-... ....... ....-...+|...++...+..+.+|.++.. ..+.++... -.+
T Consensus 231 ~d---g~i~vwd~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~------~~~~~~~~~~~~v 299 (435)
T 1p22_A 231 KD---RSIAVWDMASPTDITLRRVLVGHR--AAVNVVDFDDKYIVSASGDRTIKVWNTSTC------EFVRTLNGHKRGI 299 (435)
T ss_dssp TT---SCEEEEECSSSSCCEEEEEECCCS--SCEEEEEEETTEEEEEETTSEEEEEETTTC------CEEEEEECCSSCE
T ss_pred CC---CcEEEEeCCCCCCceeeeEecCCC--CcEEEEEeCCCEEEEEeCCCeEEEEECCcC------cEEEEEcCCCCcE
Confidence 33 4788889887543211 1101111 112222337777777778889999988752 233444332 112
Q ss_pred eEEEEEeCCeEEE-EECCcEEEEEECCCCcEE
Q 047931 285 WPLCLWKNSTKLL-VINRKNLLVCDCNNEGSE 315 (339)
Q Consensus 285 ~~~~~~~~~~i~~-~~~~~~~~~yd~~t~~~~ 315 (339)
.-+.+ +++.++ ...++.+..||+++++..
T Consensus 300 ~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~ 329 (435)
T 1p22_A 300 ACLQY--RDRLVVSGSSDNTIRLWDIECGACL 329 (435)
T ss_dssp EEEEE--ETTEEEEEETTSCEEEEETTTCCEE
T ss_pred EEEEe--CCCEEEEEeCCCeEEEEECCCCCEE
Confidence 23333 344444 445667999999987643
No 21
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.47 E-value=1.3e-06 Score=84.40 Aligned_cols=194 Identities=6% Similarity=-0.077 Sum_probs=117.7
Q ss_pred EEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEEecccCCccCccC
Q 047931 113 IFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRVLASGYTRPLIN 191 (339)
Q Consensus 113 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~~~~~~ 191 (339)
.+.++||.|++|..++.++.. ....+.+..+ ..+ +++.+. ..+...+++|+..++.|..++.++... ..
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~----~~~~~~~~~~~~~g--~lyv~G--G~~~~~v~~yd~~t~~W~~~~~~~~~R--~~ 289 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTK----HDMFCPGISMDGNG--QIVVTG--GNDAKKTSLYDSSSDSWIPGPDMQVAR--GY 289 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECS----CCCSSCEEEECTTS--CEEEEC--SSSTTCEEEEEGGGTEEEECCCCSSCC--SS
T ss_pred EEEEEeCCCCcEEeCcccCCC----CCCccccccCCCCC--CEEEeC--CCCCCceEEecCcCCceeECCCCCccc--cc
Confidence 688999999999999876543 1111222222 112 233333 112347999999999999998777653 23
Q ss_pred CCceEE-CCeEEEEEecC---CCCeEEEEEECCCceeeeec------CCCCCC-------CCc-----------------
Q 047931 192 VPGTLT-NGALHWRLQKH---GGDFVLAAFDLVEERFKEFP------LPDAST-------SFR----------------- 237 (339)
Q Consensus 192 ~~~v~~-~G~lyw~~~~~---~~~~~il~fD~~~~~~~~i~------lP~~~~-------~~~----------------- 237 (339)
...+.+ +|++|.++... .....+..||+.+++|..++ +|.... ...
T Consensus 290 ~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~ 369 (656)
T 1k3i_A 290 QSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPST 369 (656)
T ss_dssp CEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSS
T ss_pred cceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCcc
Confidence 445677 99999998732 12356899999999999862 332210 000
Q ss_pred -----------------------------eeEEEE----ECCeEEEEEeCC--------C-eEEEEEEcccCCCCCeEEE
Q 047931 238 -----------------------------FFGTGV----LGDCLCLQFFKG--------K-MKEHWIMKEYGVKESWTRV 275 (339)
Q Consensus 238 -----------------------------~~~l~~----~~G~L~~v~~~~--------~-~l~iW~l~~~~~~~~W~~~ 275 (339)
....++ .+|+|+++.... . ...|+..+. ....|...
T Consensus 370 ~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~--~~~~W~~~ 447 (656)
T 1k3i_A 370 AMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEP--GTSPNTVF 447 (656)
T ss_dssp EEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCST--TSCCEEEE
T ss_pred ceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCC--CCCCeeEE
Confidence 001122 378898887621 1 113443332 24679876
Q ss_pred E--EecCCCCeeEEEEEeCCeEEEEECC------------cEEEEEECCCCcEEEeE
Q 047931 276 F--IHQDPNNVWPLCLWKNSTKLLVINR------------KNLLVCDCNNEGSEDVA 318 (339)
Q Consensus 276 ~--~i~~~~~~~~~~~~~~~~i~~~~~~------------~~~~~yd~~t~~~~~v~ 318 (339)
. .++.+....-.++..+|+|++..+. ..+..||+++++|+.+.
T Consensus 448 ~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~ 504 (656)
T 1k3i_A 448 ASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQN 504 (656)
T ss_dssp CTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECC
T ss_pred ccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecC
Confidence 5 4444321223344457788887642 24899999999999874
No 22
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.35 E-value=5.9e-06 Score=80.14 Aligned_cols=150 Identities=9% Similarity=-0.061 Sum_probs=100.9
Q ss_pred CcEEEEEEeCCCceEEec-ccC---CccCccCCCceEE--CCeEEEEEecCC---CCeEEEEEECCCceeeee-cCCCCC
Q 047931 164 NMSVAIFSLRMNSWRRVL-ASG---YTRPLINVPGTLT--NGALHWRLQKHG---GDFVLAAFDLVEERFKEF-PLPDAS 233 (339)
Q Consensus 164 ~~~~~vyss~~~~W~~~~-~~~---~~~~~~~~~~v~~--~G~lyw~~~~~~---~~~~il~fD~~~~~~~~i-~lP~~~ 233 (339)
...+++|+..++.|+.++ .+| ..........+.+ +|.+|.+++..+ ....+..||+.+++|+.+ ++|...
T Consensus 411 ~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R 490 (695)
T 2zwa_A 411 VNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTR 490 (695)
T ss_dssp CCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCC
T ss_pred cCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCc
Confidence 456899999999999987 432 1112334556888 999999987651 234689999999999998 455443
Q ss_pred CCCceeEEEEE-CCeEEEEEe-CCCeEEEEEEcccCCCCCeEEEEE---ecCCC-CeeEEEEEeC-CeEEEEECC-----
Q 047931 234 TSFRFFGTGVL-GDCLCLQFF-KGKMKEHWIMKEYGVKESWTRVFI---HQDPN-NVWPLCLWKN-STKLLVINR----- 301 (339)
Q Consensus 234 ~~~~~~~l~~~-~G~L~~v~~-~~~~l~iW~l~~~~~~~~W~~~~~---i~~~~-~~~~~~~~~~-~~i~~~~~~----- 301 (339)
.....+.. +|+|+++++ .... ++|.++-. ..+|..+.. ++.+. +...+.+..+ +.|++..+.
T Consensus 491 ---~~h~~~~~~~~~iyv~GG~~~~~-~v~~yd~~--t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~ 564 (695)
T 2zwa_A 491 ---FRHSACSLPDGNVLILGGVTEGP-AMLLYNVT--EEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQT 564 (695)
T ss_dssp ---BSCEEEECTTSCEEEECCBCSSC-SEEEEETT--TTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSS
T ss_pred ---ccceEEEEcCCEEEEECCCCCCC-CEEEEECC--CCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCC
Confidence 34556665 999999988 3333 77777642 367998765 33322 2222333333 567776542
Q ss_pred ---cEEEEEECCCCc------EEEeEE
Q 047931 302 ---KNLLVCDCNNEG------SEDVAV 319 (339)
Q Consensus 302 ---~~~~~yd~~t~~------~~~v~~ 319 (339)
..+..||+++++ |+.+.-
T Consensus 565 ~~~~~v~~yd~~~~~w~~~~~W~~~~~ 591 (695)
T 2zwa_A 565 TVSDKAIIFKYDAENATEPITVIKKLQ 591 (695)
T ss_dssp CBCCEEEEEEECTTCSSCCEEEEEEEE
T ss_pred eeeCcEEEEEccCCccccceEEEEcCC
Confidence 259999999999 777743
No 23
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.09 E-value=1.3e-05 Score=77.28 Aligned_cols=142 Identities=8% Similarity=-0.007 Sum_probs=92.6
Q ss_pred EEEEEeCCCceEEecccCCccCccCCCceEE--CCeEEEEEecCC--------CCeEEEEEECCCceeeee-cCCCCCCC
Q 047931 167 VAIFSLRMNSWRRVLASGYTRPLINVPGTLT--NGALHWRLQKHG--------GDFVLAAFDLVEERFKEF-PLPDASTS 235 (339)
Q Consensus 167 ~~vyss~~~~W~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~--------~~~~il~fD~~~~~~~~i-~lP~~~~~ 235 (339)
++.|+..++.|+.+..+|.. ...++.+ +|.+|.++.... ....+..||+.+++|+.+ .+|.....
T Consensus 168 ~~~~dp~~~~W~~~~~~P~~----~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~ 243 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPIV----PAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDM 243 (656)
T ss_dssp CCCCCTTSCEEEEEEECSSC----CSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCC
T ss_pred cccCCCCCCeeeeeccCCCC----ceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCC
Confidence 45566778999998777652 2234445 999999986531 123689999999999987 34333221
Q ss_pred CceeEEEE-ECCeEEEEEe-CCCeEEEEEEcccCCCCCeEEEEEecCCCCeeEEEEEeCCeEEEEECC-------cEEEE
Q 047931 236 FRFFGTGV-LGDCLCLQFF-KGKMKEHWIMKEYGVKESWTRVFIHQDPNNVWPLCLWKNSTKLLVINR-------KNLLV 306 (339)
Q Consensus 236 ~~~~~l~~-~~G~L~~v~~-~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~i~~~~~~-------~~~~~ 306 (339)
.....+. .+|+|+++.. ....+.+|..+. .+|.+...++.+....-.++..+|+|++..+. ..+..
T Consensus 244 -~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t----~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~ 318 (656)
T 1k3i_A 244 -FCPGISMDGNGQIVVTGGNDAKKTSLYDSSS----DSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEV 318 (656)
T ss_dssp -SSCEEEECTTSCEEEECSSSTTCEEEEEGGG----TEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEE
T ss_pred -ccccccCCCCCCEEEeCCCCCCceEEecCcC----CceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceE
Confidence 2222333 5899999988 444444444432 57998765544332333444447788887652 24999
Q ss_pred EECCCCcEEEe
Q 047931 307 CDCNNEGSEDV 317 (339)
Q Consensus 307 yd~~t~~~~~v 317 (339)
||+++++|+.+
T Consensus 319 yd~~t~~W~~~ 329 (656)
T 1k3i_A 319 YSPSSKTWTSL 329 (656)
T ss_dssp EETTTTEEEEE
T ss_pred eCCCCCcceeC
Confidence 99999999987
No 24
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.99 E-value=4.2e-07 Score=76.69 Aligned_cols=47 Identities=23% Similarity=0.443 Sum_probs=43.4
Q ss_pred CCCcHHHHHHHHccCCcccceeeeeccccccccCCChHHHHHHhccc
Q 047931 2 ATIPHEIIFEILLRLPVKSLCRFKCVSSSWLALISDPQFVMLQLHRN 48 (339)
Q Consensus 2 ~~Lp~Dll~eIL~rLP~~~l~r~~~VcK~W~~li~sp~F~~~~~~~~ 48 (339)
+.||+|++..||+.|++++|+++.+|||+||.+.+++..-+.++.+.
T Consensus 6 ~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd 52 (312)
T 3l2o_B 6 TRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRD 52 (312)
T ss_dssp HHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSS
T ss_pred HhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhcc
Confidence 46999999999999999999999999999999999999888777665
No 25
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.41 E-value=1.5e-05 Score=69.95 Aligned_cols=39 Identities=26% Similarity=0.476 Sum_probs=35.9
Q ss_pred CCCCcHHHHHHHHccCCcccceeeeeccccccccCCChH
Q 047931 1 MATIPHEIIFEILLRLPVKSLCRFKCVSSSWLALISDPQ 39 (339)
Q Consensus 1 ~~~Lp~Dll~eIL~rLP~~~l~r~~~VcK~W~~li~sp~ 39 (339)
++.||+|++.+||.+|+.+++.+++.|||+|+.++.+|.
T Consensus 9 ~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~ 47 (336)
T 2ast_B 9 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDES 47 (336)
T ss_dssp SSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCST
T ss_pred hhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCch
Confidence 468999999999999999999999999999999987665
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.90 E-value=9.4e-05 Score=70.16 Aligned_cols=34 Identities=18% Similarity=0.345 Sum_probs=29.4
Q ss_pred CCCCcHHHHHHHHccCC-cccceeeeecccccccc
Q 047931 1 MATIPHEIIFEILLRLP-VKSLCRFKCVSSSWLAL 34 (339)
Q Consensus 1 ~~~Lp~Dll~eIL~rLP-~~~l~r~~~VcK~W~~l 34 (339)
++.||+|++.+||++|| .+++.+++.|||+|+.+
T Consensus 6 ~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 6 ALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ----CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred hhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 36799999999999999 99999999999999987
No 27
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.40 E-value=0.00035 Score=66.19 Aligned_cols=33 Identities=12% Similarity=0.259 Sum_probs=31.0
Q ss_pred CCCcHHHHHHHHccC-Ccccceeeeecccccccc
Q 047931 2 ATIPHEIIFEILLRL-PVKSLCRFKCVSSSWLAL 34 (339)
Q Consensus 2 ~~Lp~Dll~eIL~rL-P~~~l~r~~~VcK~W~~l 34 (339)
+.||||++.+||.+| |.+++.+++.|||+|+.+
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 369999999999999 899999999999999886
No 28
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=95.73 E-value=0.87 Score=39.16 Aligned_cols=188 Identities=9% Similarity=-0.068 Sum_probs=100.6
Q ss_pred CCEEEEEcccccceee-cCCCCCCCCCCCCCCeeEEeeeCCceEEEEEeeEeCCCcEEEEEEeCCCce-EEecccCCccC
Q 047931 111 PKIFFVLNPLTRESKR-IPDVPFEPFPRSSDDLYGFGCTAEDCKFIKVSFGLKPNMSVAIFSLRMNSW-RRVLASGYTRP 188 (339)
Q Consensus 111 ~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~g~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W-~~~~~~~~~~~ 188 (339)
...+.++||.|++... ++..... ........++.+. +....+... ..-.+.+++..++.- ++++....
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~--~~lg~~~~~i~~~-~~~lyv~~~----~~~~v~viD~~t~~~~~~i~~~~~--- 85 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANG--FKLGDVAQSMVIR-DGIGWIVVN----NSHVIFAIDINTFKEVGRITGFTS--- 85 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHS--SCCBSCEEEEEEE-TTEEEEEEG----GGTEEEEEETTTCCEEEEEECCSS---
T ss_pred CceEEEEECCCCEEhhhhHhhhcC--cccCccceEEEEE-CCEEEEEEc----CCCEEEEEECcccEEEEEcCCCCC---
Confidence 5689999999988643 2110000 0011012223222 222222211 245688888887655 33321111
Q ss_pred ccCCCc-eEECCeEEEEEecCCCCeEEEEEECCCceee-eecCCCCCCC-CceeEEEEECCeEEEEEe-CCCeEEEEEEc
Q 047931 189 LINVPG-TLTNGALHWRLQKHGGDFVLAAFDLVEERFK-EFPLPDASTS-FRFFGTGVLGDCLCLQFF-KGKMKEHWIMK 264 (339)
Q Consensus 189 ~~~~~~-v~~~G~lyw~~~~~~~~~~il~fD~~~~~~~-~i~lP~~~~~-~~~~~l~~~~G~L~~v~~-~~~~l~iW~l~ 264 (339)
...- +.-+|.+|...... ..|..+|+++.+.. .++++..... .....++..+|+|++... ....+.++.++
T Consensus 86 --p~~i~~~~~g~lyv~~~~~---~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~ 160 (328)
T 3dsm_A 86 --PRYIHFLSDEKAYVTQIWD---YRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTE 160 (328)
T ss_dssp --EEEEEEEETTEEEEEEBSC---SEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETT
T ss_pred --CcEEEEeCCCeEEEEECCC---CeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECC
Confidence 1111 22588888776332 48999999998765 5666551100 011133447899998876 46677766655
Q ss_pred ccCCCCCeEEEEEecCCCCeeEEEEEeCCeEEEEECC-----------cEEEEEECCCCcEE-EeEE
Q 047931 265 EYGVKESWTRVFIHQDPNNVWPLCLWKNSTKLLVINR-----------KNLLVCDCNNEGSE-DVAV 319 (339)
Q Consensus 265 ~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~i~~~~~~-----------~~~~~yd~~t~~~~-~v~~ 319 (339)
. .+.. .++.......-+++.++|++++.... ..++.+|.+++++. .+.+
T Consensus 161 t----~~~~--~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~ 221 (328)
T 3dsm_A 161 T----DKVV--DELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKF 221 (328)
T ss_dssp T----TEEE--EEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEEC
T ss_pred C----CeEE--EEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEec
Confidence 3 2222 33433111223455667887776643 46999999999876 4444
No 29
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=95.41 E-value=0.92 Score=37.35 Aligned_cols=113 Identities=13% Similarity=0.026 Sum_probs=73.7
Q ss_pred eEECCeEEEEEecCCCCeEEEEEECCCcee-eeecCCCCCCCCceeEEEEECCeEEEEEeCCCeEEEEEEcccCCCCCeE
Q 047931 195 TLTNGALHWRLQKHGGDFVLAAFDLVEERF-KEFPLPDASTSFRFFGTGVLGDCLCLQFFKGKMKEHWIMKEYGVKESWT 273 (339)
Q Consensus 195 v~~~G~lyw~~~~~~~~~~il~fD~~~~~~-~~i~lP~~~~~~~~~~l~~~~G~L~~v~~~~~~l~iW~l~~~~~~~~W~ 273 (339)
.+.+|.+|--+..+ ....|..+|+++.+. +.+++|... +...++..+++|+++.-.+..+-++..+. -.
T Consensus 27 ~~~~~~LyestG~~-g~S~v~~vD~~tgkv~~~~~l~~~~---fgeGi~~~~~~ly~ltw~~~~v~v~D~~t------l~ 96 (243)
T 3mbr_X 27 FYLRGHLYESTGET-GRSSVRKVDLETGRILQRAEVPPPY---FGAGIVAWRDRLIQLTWRNHEGFVYDLAT------LT 96 (243)
T ss_dssp EEETTEEEEEECCT-TSCEEEEEETTTCCEEEEEECCTTC---CEEEEEEETTEEEEEESSSSEEEEEETTT------TE
T ss_pred EEECCEEEEECCCC-CCceEEEEECCCCCEEEEEeCCCCc---ceeEEEEeCCEEEEEEeeCCEEEEEECCc------Cc
Confidence 45566666544442 235899999998775 556888765 44566778999999877666655544432 45
Q ss_pred EEEEecCCCCeeEEEEEeCCe-EEEEECCcEEEEEECCCCcE-EEeEE
Q 047931 274 RVFIHQDPNNVWPLCLWKNST-KLLVINRKNLLVCDCNNEGS-EDVAV 319 (339)
Q Consensus 274 ~~~~i~~~~~~~~~~~~~~~~-i~~~~~~~~~~~yd~~t~~~-~~v~~ 319 (339)
++.+++.+- ...++..+++ +++..++.++..+|++|.+. +.+.+
T Consensus 97 ~~~ti~~~~--~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 97 PRARFRYPG--EGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp EEEEEECSS--CCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred EEEEEeCCC--CceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEE
Confidence 566775531 2345555554 55555556799999999774 45655
No 30
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=95.00 E-value=0.79 Score=38.18 Aligned_cols=113 Identities=14% Similarity=0.063 Sum_probs=72.2
Q ss_pred eEECCeEEEEEecCCCCeEEEEEECCCcee-eeecCCCCCCCCceeEEEEECCeEEEEEeCCCeEEEEEEcccCCCCCeE
Q 047931 195 TLTNGALHWRLQKHGGDFVLAAFDLVEERF-KEFPLPDASTSFRFFGTGVLGDCLCLQFFKGKMKEHWIMKEYGVKESWT 273 (339)
Q Consensus 195 v~~~G~lyw~~~~~~~~~~il~fD~~~~~~-~~i~lP~~~~~~~~~~l~~~~G~L~~v~~~~~~l~iW~l~~~~~~~~W~ 273 (339)
.+.+|.+|--+..+ ....|..+|+++.+. +.+++|... +...+...+++|+++...+..+-++..+. -.
T Consensus 49 ~~~~~~LyestG~~-g~S~v~~vD~~Tgkv~~~~~l~~~~---FgeGit~~g~~ly~ltw~~~~v~v~D~~t------~~ 118 (262)
T 3nol_A 49 FYRNGYFYESTGLN-GRSSIRKVDIESGKTLQQIELGKRY---FGEGISDWKDKIVGLTWKNGLGFVWNIRN------LR 118 (262)
T ss_dssp EEETTEEEEEEEET-TEEEEEEECTTTCCEEEEEECCTTC---CEEEEEEETTEEEEEESSSSEEEEEETTT------CC
T ss_pred EEECCEEEEECCCC-CCceEEEEECCCCcEEEEEecCCcc---ceeEEEEeCCEEEEEEeeCCEEEEEECcc------Cc
Confidence 45577777655543 234799999998775 556777654 44557778999999877776665554443 34
Q ss_pred EEEEecCCCCeeEEEEEeCCeEEEEEC-CcEEEEEECCCCc-EEEeEE
Q 047931 274 RVFIHQDPNNVWPLCLWKNSTKLLVIN-RKNLLVCDCNNEG-SEDVAV 319 (339)
Q Consensus 274 ~~~~i~~~~~~~~~~~~~~~~i~~~~~-~~~~~~yd~~t~~-~~~v~~ 319 (339)
++.+|+.+- ...++..+|+.++..+ +.++..+|++|.+ ...+.+
T Consensus 119 ~~~ti~~~~--eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 119 QVRSFNYDG--EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp EEEEEECSS--CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEEC
T ss_pred EEEEEECCC--CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEe
Confidence 455665421 2334445665444443 5569999999877 446555
No 31
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=94.95 E-value=1.6 Score=37.52 Aligned_cols=141 Identities=9% Similarity=0.068 Sum_probs=80.9
Q ss_pred CcEEEEEEeCCCceEEecccCCccCccCCCceEEC----CeEEEEEecCCCCeEEEEEECCCcee-eeecCCCCCCCCce
Q 047931 164 NMSVAIFSLRMNSWRRVLASGYTRPLINVPGTLTN----GALHWRLQKHGGDFVLAAFDLVEERF-KEFPLPDASTSFRF 238 (339)
Q Consensus 164 ~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~v~~~----G~lyw~~~~~~~~~~il~fD~~~~~~-~~i~lP~~~~~~~~ 238 (339)
.-.+.+|+..++.|..+....... ..-..+.++ |.+...+..+ ..|..+|+.+... ..+.+..... ..
T Consensus 78 dg~v~iwd~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~l~~~~~d---~~i~v~d~~~~~~~~~~~~~~~~~--~v 150 (379)
T 3jrp_A 78 DGKVLIWKEENGRWSQIAVHAVHS--ASVNSVQWAPHEYGPLLLVASSD---GKVSVVEFKENGTTSPIIIDAHAI--GV 150 (379)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCS--SCEEEEEECCGGGCSEEEEEETT---SEEEEEECCTTSCCCEEEEECCTT--CE
T ss_pred CCEEEEEEcCCCceeEeeeecCCC--cceEEEEeCCCCCCCEEEEecCC---CcEEEEecCCCCceeeEEecCCCC--ce
Confidence 456889999999887664333211 011123332 4344433333 4788888877622 2111111111 11
Q ss_pred eEEEEE--------------CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecCC-CCeeEEEEEeC---CeEEEEE-
Q 047931 239 FGTGVL--------------GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQDP-NNVWPLCLWKN---STKLLVI- 299 (339)
Q Consensus 239 ~~l~~~--------------~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~-~~~~~~~~~~~---~~i~~~~- 299 (339)
..+... +|.+.++...+..+.+|.++.. ...|....++... -.+.-+++.++ +.+++..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~ 228 (379)
T 3jrp_A 151 NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSD--AQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 228 (379)
T ss_dssp EEEEECCCC----------CTTCEEEEEETTSCEEEEEEETT--TTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred EEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCC--CcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEe
Confidence 122222 5777777778889999999852 2457776666542 22566777777 6666654
Q ss_pred CCcEEEEEECCCCc
Q 047931 300 NRKNLLVCDCNNEG 313 (339)
Q Consensus 300 ~~~~~~~yd~~t~~ 313 (339)
.++.+.+||+++.+
T Consensus 229 ~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 229 QDRTCIIWTQDNEQ 242 (379)
T ss_dssp TTSCEEEEEESSTT
T ss_pred CCCEEEEEeCCCCC
Confidence 45569999998874
No 32
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=94.90 E-value=1.7 Score=37.63 Aligned_cols=194 Identities=8% Similarity=-0.100 Sum_probs=97.4
Q ss_pred eCceEEEccCCCEEEEEcccccceeecCCCCCCCCCCCCC-CeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceE
Q 047931 101 CNGLVCTTPKPKIFFVLNPLTRESKRIPDVPFEPFPRSSD-DLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWR 178 (339)
Q Consensus 101 ~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~-~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~ 178 (339)
-++.++....++.+.|||..+++.......... .+. ....+.+ ..+.+-+.+-. ...+.+++.+++.=.
T Consensus 92 ~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~----~H~~~V~~v~~spdg~~l~sgs~-----d~~i~iwd~~~~~~~ 162 (344)
T 4gqb_B 92 GERGILVASDSGAVELWELDENETLIVSKFCKY----EHDDIVSTVSVLSSGTQAVSGSK-----DICIKVWDLAQQVVL 162 (344)
T ss_dssp TTTEEEEEETTSEEEEEEECTTSSCEEEEEEEE----CCSSCEEEEEECTTSSEEEEEET-----TSCEEEEETTTTEEE
T ss_pred CCCeEEEEECCCEEEEEeccCCCceeEeecccc----CCCCCEEEEEECCCCCEEEEEeC-----CCeEEEEECCCCcEE
Confidence 355555555577899999988875433221110 111 1455555 34444333222 446788888775322
Q ss_pred EecccCCccCccCCCceEE--CCeEEEEEecCCCCeEEEEEECCCceee-eecCCCCCCCCceeEEEEE--CCeEEEEEe
Q 047931 179 RVLASGYTRPLINVPGTLT--NGALHWRLQKHGGDFVLAAFDLVEERFK-EFPLPDASTSFRFFGTGVL--GDCLCLQFF 253 (339)
Q Consensus 179 ~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~~~~~-~i~lP~~~~~~~~~~l~~~--~G~L~~v~~ 253 (339)
. .+.... ..-..+.+ +|.-+.++... ...|..+|+++.+.. .+..+.... ....+... ++.+.+...
T Consensus 163 ~--~~~~h~--~~V~~~~~~~~~~~~l~s~s~--D~~v~iwd~~~~~~~~~~~~~~~~~--~~~~~~~~p~~~~~l~sg~ 234 (344)
T 4gqb_B 163 S--SYRAHA--AQVTCVAASPHKDSVFLSCSE--DNRILLWDTRCPKPASQIGCSAPGY--LPTSLAWHPQQSEVFVFGD 234 (344)
T ss_dssp E--EECCCS--SCEEEEEECSSCTTEEEEEET--TSCEEEEETTSSSCEEECC----CC--CEEEEEECSSCTTEEEEEE
T ss_pred E--EEcCcC--CceEEEEecCCCCCceeeecc--ccccccccccccceeeeeecceeec--cceeeeecCCCCcceEEec
Confidence 1 111100 00011222 23222222221 246888899876543 333222221 12223332 566666666
Q ss_pred CCCeEEEEEEcccCCCCCeEEEEEecC-CCCeeEEEEEeCC-eEEEE-ECCcEEEEEECCCCcEEEe
Q 047931 254 KGKMKEHWIMKEYGVKESWTRVFIHQD-PNNVWPLCLWKNS-TKLLV-INRKNLLVCDCNNEGSEDV 317 (339)
Q Consensus 254 ~~~~l~iW~l~~~~~~~~W~~~~~i~~-~~~~~~~~~~~~~-~i~~~-~~~~~~~~yd~~t~~~~~v 317 (339)
.+..+.||.++.. ..+.++.. .-.+.-+++.++| .++.. ..++.+.+||.+++++.+.
T Consensus 235 ~dg~v~~wd~~~~------~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~ 295 (344)
T 4gqb_B 235 ENGTVSLVDTKST------SCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRS 295 (344)
T ss_dssp TTSEEEEEESCC--------CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEE
T ss_pred cCCcEEEEECCCC------cEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEE
Confidence 8889999988742 12233332 1125567777776 45553 4456799999999876543
No 33
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=94.56 E-value=2.2 Score=37.45 Aligned_cols=179 Identities=9% Similarity=-0.004 Sum_probs=99.0
Q ss_pred CCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEEe-cccCCcc
Q 047931 110 KPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRV-LASGYTR 187 (339)
Q Consensus 110 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~-~~~~~~~ 187 (339)
.++.++++|..+++...+-..... .....+.+ ..+.+-+++.. .-.+.+|+..++.-... ....
T Consensus 111 ~d~~v~lw~~~~~~~~~~~~~~~~------~~v~~v~~s~~~~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~~--- 176 (401)
T 4aez_A 111 LERNVYVWNADSGSVSALAETDES------TYVASVKWSHDGSFLSVGLG-----NGLVDIYDVESQTKLRTMAGHQ--- 176 (401)
T ss_dssp ETTEEEEEETTTCCEEEEEECCTT------CCEEEEEECTTSSEEEEEET-----TSCEEEEETTTCCEEEEECCCS---
T ss_pred CCCeEEEeeCCCCcEeEeeecCCC------CCEEEEEECCCCCEEEEECC-----CCeEEEEECcCCeEEEEecCCC---
Confidence 467899999999887655333211 01455555 34444443322 44688888877643222 1111
Q ss_pred CccCCCceEECCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCeEEEEEeCCCeEEEEEEccc
Q 047931 188 PLINVPGTLTNGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDCLCLQFFKGKMKEHWIMKEY 266 (339)
Q Consensus 188 ~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~L~~v~~~~~~l~iW~l~~~ 266 (339)
.....+.++|.....+..+ ..|..+|+.+..-....+..... ....+... +|.+.++...+..+.+|.++..
T Consensus 177 --~~v~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~ 249 (401)
T 4aez_A 177 --ARVGCLSWNRHVLSSGSRS---GAIHHHDVRIANHQIGTLQGHSS--EVCGLAWRSDGLQLASGGNDNVVQIWDARSS 249 (401)
T ss_dssp --SCEEEEEEETTEEEEEETT---SEEEEEETTSSSCEEEEEECCSS--CEEEEEECTTSSEEEEEETTSCEEEEETTCS
T ss_pred --CceEEEEECCCEEEEEcCC---CCEEEEecccCcceeeEEcCCCC--CeeEEEEcCCCCEEEEEeCCCeEEEccCCCC
Confidence 1112345566655544443 58889998843322211111111 12233333 7777777778889999998751
Q ss_pred CCCCCeEEEEEecC-CCCeeEEEEEeCC-eEEEEEC---CcEEEEEECCCCcEE
Q 047931 267 GVKESWTRVFIHQD-PNNVWPLCLWKNS-TKLLVIN---RKNLLVCDCNNEGSE 315 (339)
Q Consensus 267 ~~~~~W~~~~~i~~-~~~~~~~~~~~~~-~i~~~~~---~~~~~~yd~~t~~~~ 315 (339)
....++.. .-.+.-+++.+++ .++.... ++.+..||+++++..
T Consensus 250 ------~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~ 297 (401)
T 4aez_A 250 ------IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARV 297 (401)
T ss_dssp ------SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEE
T ss_pred ------CccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEE
Confidence 12233332 1125567777755 4665543 567999999888744
No 34
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=94.46 E-value=2 Score=41.74 Aligned_cols=141 Identities=9% Similarity=0.068 Sum_probs=80.3
Q ss_pred CcEEEEEEeCCCceEEecccCCccCccCCCceEEC----CeEEEEEecCCCCeEEEEEECCCceee-eecCCCCCCCCce
Q 047931 164 NMSVAIFSLRMNSWRRVLASGYTRPLINVPGTLTN----GALHWRLQKHGGDFVLAAFDLVEERFK-EFPLPDASTSFRF 238 (339)
Q Consensus 164 ~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~v~~~----G~lyw~~~~~~~~~~il~fD~~~~~~~-~i~lP~~~~~~~~ 238 (339)
...+.+++..++.|..+....... ..-..+.+. |.....+..+ ..|..+|+.+..-. ...+..... ..
T Consensus 76 Dg~I~vwd~~~~~~~~~~~~~~h~--~~V~~v~~sp~~~~~~l~sgs~d---g~I~vwdl~~~~~~~~~~~~~~~~--~v 148 (753)
T 3jro_A 76 DGKVLIWKEENGRWSQIAVHAVHS--ASVNSVQWAPHEYGPLLLVASSD---GKVSVVEFKENGTTSPIIIDAHAI--GV 148 (753)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCS--SCEEEEEECCGGGCSEEEEEETT---SEEEEEECCSSSCCCCEEEECCSS--CE
T ss_pred CCeEEEEECCCCcccccccccCCC--CCeEEEEECCCCCCCEEEEEeCC---CcEEEEEeecCCCcceeEeecCCC--ce
Confidence 456889999998887664332211 011123332 4444444433 47888888776221 111111110 11
Q ss_pred eEEEEE--------------CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecCC-CCeeEEEEEeC---CeEEEEEC
Q 047931 239 FGTGVL--------------GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQDP-NNVWPLCLWKN---STKLLVIN 300 (339)
Q Consensus 239 ~~l~~~--------------~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~-~~~~~~~~~~~---~~i~~~~~ 300 (339)
..+... +|.+.++...+..+.+|.+... ...+....++... -.+.-+++.++ +.+++..+
T Consensus 149 ~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~--~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s 226 (753)
T 3jro_A 149 NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSD--AQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 226 (753)
T ss_dssp EEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETT--TTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred EEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCC--cccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEe
Confidence 122221 4677777778889999999863 2456666666542 22566777777 77666554
Q ss_pred -CcEEEEEECCCCc
Q 047931 301 -RKNLLVCDCNNEG 313 (339)
Q Consensus 301 -~~~~~~yd~~t~~ 313 (339)
++.+.+||+++++
T Consensus 227 ~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 227 QDRTCIIWTQDNEQ 240 (753)
T ss_dssp SSSCEEEEEESSSS
T ss_pred cCCEEEEecCCCCC
Confidence 5569999998864
No 35
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=94.13 E-value=2.6 Score=36.56 Aligned_cols=177 Identities=11% Similarity=0.047 Sum_probs=93.9
Q ss_pred CCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEEecccCCccC
Q 047931 110 KPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRVLASGYTRP 188 (339)
Q Consensus 110 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~~~ 188 (339)
.+..+.++|..+++....-..... ..++.+ ..+.+-++... ....+.+++..++.-...-..+..
T Consensus 10 ~d~~v~v~d~~~~~~~~~~~~~~~--------~~~~~~s~dg~~l~~~~~----~d~~i~v~d~~~~~~~~~~~~~~~-- 75 (391)
T 1l0q_A 10 ESDNISVIDVTSNKVTATIPVGSN--------PMGAVISPDGTKVYVANA----HSNDVSIIDTATNNVIATVPAGSS-- 75 (391)
T ss_dssp TTTEEEEEETTTTEEEEEEECSSS--------EEEEEECTTSSEEEEEEG----GGTEEEEEETTTTEEEEEEECSSS--
T ss_pred CCCEEEEEECCCCeEEEEeecCCC--------cceEEECCCCCEEEEECC----CCCeEEEEECCCCeEEEEEECCCC--
Confidence 456888999888775443222211 344555 33444333321 234788888887754332111111
Q ss_pred ccCCCceEE--CCeEEEEEecCCCCeEEEEEECCCceeee-ecCCCCCCCCceeEEEEE-CCe-EEEEEeCCCeEEEEEE
Q 047931 189 LINVPGTLT--NGALHWRLQKHGGDFVLAAFDLVEERFKE-FPLPDASTSFRFFGTGVL-GDC-LCLQFFKGKMKEHWIM 263 (339)
Q Consensus 189 ~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~~~~~~-i~lP~~~~~~~~~~l~~~-~G~-L~~v~~~~~~l~iW~l 263 (339)
..++.+ +|..-+++... ...|..+|+.+.+... +..... ...+... +|+ |++.......+.+|.+
T Consensus 76 ---v~~~~~spdg~~l~~~~~~--~~~v~v~d~~~~~~~~~~~~~~~-----~~~~~~s~dg~~l~~~~~~~~~v~~~d~ 145 (391)
T 1l0q_A 76 ---PQGVAVSPDGKQVYVTNMA--SSTLSVIDTTSNTVAGTVKTGKS-----PLGLALSPDGKKLYVTNNGDKTVSVINT 145 (391)
T ss_dssp ---EEEEEECTTSSEEEEEETT--TTEEEEEETTTTEEEEEEECSSS-----EEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred ---ccceEECCCCCEEEEEECC--CCEEEEEECCCCeEEEEEeCCCC-----cceEEECCCCCEEEEEeCCCCEEEEEEC
Confidence 112222 45533333321 2479999999876543 332211 2233433 665 4455557889999987
Q ss_pred cccCCCCCeEEEEEecCCCCeeEEEEEeCCeEE-EEE-CCcEEEEEECCCCcEEE
Q 047931 264 KEYGVKESWTRVFIHQDPNNVWPLCLWKNSTKL-LVI-NRKNLLVCDCNNEGSED 316 (339)
Q Consensus 264 ~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~i~-~~~-~~~~~~~yd~~t~~~~~ 316 (339)
+. .+. +..+...-....+++.++|+.+ +.. .+..+..||+++++...
T Consensus 146 ~~----~~~--~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 194 (391)
T 1l0q_A 146 VT----KAV--INTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVID 194 (391)
T ss_dssp TT----TEE--EEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CC----CcE--EEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEE
Confidence 64 222 2333322224566677777655 443 34579999999987553
No 36
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=93.97 E-value=2.8 Score=36.32 Aligned_cols=193 Identities=10% Similarity=-0.025 Sum_probs=102.5
Q ss_pred eEEEccCCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEeeeC-CceEEEEEeeEeCCCcEEEEEEeCCCceEEecc
Q 047931 104 LVCTTPKPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGCTA-EDCKFIKVSFGLKPNMSVAIFSLRMNSWRRVLA 182 (339)
Q Consensus 104 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~-~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~ 182 (339)
++.....+..+.|+|..+++....-..... .....++.+.. +.-.++... ....+.+++..+...+....
T Consensus 88 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h-----~~~v~~~~~~~~~~~~l~s~~----~d~~i~iwd~~~~~~~~~~~ 158 (383)
T 3ei3_B 88 TVAVGSKGGDIILWDYDVQNKTSFIQGMGP-----GDAITGMKFNQFNTNQLFVSS----IRGATTLRDFSGSVIQVFAK 158 (383)
T ss_dssp EEEEEEBTSCEEEEETTSTTCEEEECCCST-----TCBEEEEEEETTEEEEEEEEE----TTTEEEEEETTSCEEEEEEC
T ss_pred EEEEEcCCCeEEEEeCCCcccceeeecCCc-----CCceeEEEeCCCCCCEEEEEe----CCCEEEEEECCCCceEEEec
Confidence 444434456788899888775544322111 01144555532 222333222 24578888888766655532
Q ss_pred cCCccCccCCCceEECCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCe-EEEEEeCCCeEEE
Q 047931 183 SGYTRPLINVPGTLTNGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDC-LCLQFFKGKMKEH 260 (339)
Q Consensus 183 ~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~-L~~v~~~~~~l~i 260 (339)
..........-...-+|.....+..+ ..|..+|+..+....+..... ....+... +|. +.+....+..+.+
T Consensus 159 ~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~h~~----~v~~~~~~~~~~~~l~s~~~d~~i~i 231 (383)
T 3ei3_B 159 TDSWDYWYCCVDVSVSRQMLATGDST---GRLLLLGLDGHEIFKEKLHKA----KVTHAEFNPRCDWLMATSSVDATVKL 231 (383)
T ss_dssp CCCSSCCEEEEEEETTTTEEEEEETT---SEEEEEETTSCEEEEEECSSS----CEEEEEECSSCTTEEEEEETTSEEEE
T ss_pred cCCCCCCeEEEEECCCCCEEEEECCC---CCEEEEECCCCEEEEeccCCC----cEEEEEECCCCCCEEEEEeCCCEEEE
Confidence 21100000000122245544444433 588899987666555543221 12233333 566 6666668889999
Q ss_pred EEEcccCCCCCeEEEEEecCCCCeeEEEEEe-CCeEEEEE-CCcEEEEEECCCCcE
Q 047931 261 WIMKEYGVKESWTRVFIHQDPNNVWPLCLWK-NSTKLLVI-NRKNLLVCDCNNEGS 314 (339)
Q Consensus 261 W~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~-~~~i~~~~-~~~~~~~yd~~t~~~ 314 (339)
|.+....... .....+...-.+.-+++.+ +|..++.. .++.+.+||+++.+.
T Consensus 232 wd~~~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 232 WDLRNIKDKN--SYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSK 285 (383)
T ss_dssp EEGGGCCSTT--CEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTS
T ss_pred EeCCCCCccc--ceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 9998643222 2233333322356677777 77655544 456799999988764
No 37
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=93.95 E-value=2.9 Score=36.32 Aligned_cols=176 Identities=9% Similarity=0.027 Sum_probs=94.3
Q ss_pred CCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEEecccCCccC
Q 047931 110 KPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRVLASGYTRP 188 (339)
Q Consensus 110 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~~~ 188 (339)
.+..+.++|+.+++....-..... ..++.+ ..+.+-++.. .....+.+|+..++.-...-.....
T Consensus 52 ~d~~i~v~d~~~~~~~~~~~~~~~--------v~~~~~spdg~~l~~~~----~~~~~v~v~d~~~~~~~~~~~~~~~-- 117 (391)
T 1l0q_A 52 HSNDVSIIDTATNNVIATVPAGSS--------PQGVAVSPDGKQVYVTN----MASSTLSVIDTTSNTVAGTVKTGKS-- 117 (391)
T ss_dssp GGTEEEEEETTTTEEEEEEECSSS--------EEEEEECTTSSEEEEEE----TTTTEEEEEETTTTEEEEEEECSSS--
T ss_pred CCCeEEEEECCCCeEEEEEECCCC--------ccceEECCCCCEEEEEE----CCCCEEEEEECCCCeEEEEEeCCCC--
Confidence 457899999988876443222212 445555 3344433332 1245788999887754332111111
Q ss_pred ccCCCceEE--CCeEEEEEecCCCCeEEEEEECCCceeeee-cCCCCCCCCceeEEEEE-CCe-EEEEEeCCCeEEEEEE
Q 047931 189 LINVPGTLT--NGALHWRLQKHGGDFVLAAFDLVEERFKEF-PLPDASTSFRFFGTGVL-GDC-LCLQFFKGKMKEHWIM 263 (339)
Q Consensus 189 ~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~l~~~-~G~-L~~v~~~~~~l~iW~l 263 (339)
..++.+ +|...++.... ...|..+|+.+.+.... ..... ...+... +|+ |++....+..+.+|.+
T Consensus 118 ---~~~~~~s~dg~~l~~~~~~--~~~v~~~d~~~~~~~~~~~~~~~-----~~~~~~~~dg~~l~~~~~~~~~v~~~d~ 187 (391)
T 1l0q_A 118 ---PLGLALSPDGKKLYVTNNG--DKTVSVINTVTKAVINTVSVGRS-----PKGIAVTPDGTKVYVANFDSMSISVIDT 187 (391)
T ss_dssp ---EEEEEECTTSSEEEEEETT--TTEEEEEETTTTEEEEEEECCSS-----EEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred ---cceEEECCCCCEEEEEeCC--CCEEEEEECCCCcEEEEEecCCC-----cceEEECCCCCEEEEEeCCCCEEEEEEC
Confidence 112222 45533333332 24888999988765433 32211 1233333 564 4444457788999987
Q ss_pred cccCCCCCeEEEEEecCCCCeeEEEEEeCCeEEEEE----CCcEEEEEECCCCcEE
Q 047931 264 KEYGVKESWTRVFIHQDPNNVWPLCLWKNSTKLLVI----NRKNLLVCDCNNEGSE 315 (339)
Q Consensus 264 ~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~i~~~~----~~~~~~~yd~~t~~~~ 315 (339)
+. ......+...-...-+++.++|+.++.. .+..+..||+++++..
T Consensus 188 ~~------~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~ 237 (391)
T 1l0q_A 188 VT------NSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKIT 237 (391)
T ss_dssp TT------TEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEE
T ss_pred CC------CeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEE
Confidence 64 1233334332123445666777655543 3567999999988643
No 38
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=93.90 E-value=1.4 Score=38.09 Aligned_cols=187 Identities=9% Similarity=-0.045 Sum_probs=86.9
Q ss_pred CCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCc-eEEecccCCcc
Q 047931 110 KPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNS-WRRVLASGYTR 187 (339)
Q Consensus 110 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~-W~~~~~~~~~~ 187 (339)
.+..+.|+|..++++..+-..... ......+.+ ..+.+-+.+-. ...+.+|+..++. |+....+....
T Consensus 31 ~d~~i~iw~~~~~~~~~~~~~~~h-----~~~v~~~~~s~~~~~l~s~s~-----d~~v~vwd~~~~~~~~~~~~~~~~~ 100 (377)
T 3dwl_C 31 ATNQVELYEQDGNGWKHARTFSDH-----DKIVTCVDWAPKSNRIVTCSQ-----DRNAYVYEKRPDGTWKQTLVLLRLN 100 (377)
T ss_dssp SSSCBCEEEEETTEEEECCCBCCC-----SSCEEEEEECTTTCCEEEEET-----TSSEEEC------CCCCEEECCCCS
T ss_pred CCCEEEEEEccCCceEEEEEEecC-----CceEEEEEEeCCCCEEEEEeC-----CCeEEEEEcCCCCceeeeeEecccC
Confidence 456778888888754433332211 011455555 33444333322 4467888887765 54432221110
Q ss_pred CccCCCceEE--CCeEEEEEecCCCCeEEEEEECCCce----eeeecCCCCCCCCceeEEEEE-CCeEEEEEeCCCeEEE
Q 047931 188 PLINVPGTLT--NGALHWRLQKHGGDFVLAAFDLVEER----FKEFPLPDASTSFRFFGTGVL-GDCLCLQFFKGKMKEH 260 (339)
Q Consensus 188 ~~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~~~----~~~i~lP~~~~~~~~~~l~~~-~G~L~~v~~~~~~l~i 260 (339)
..-..+.+ +|.....+..+ ..|..+|+.+.+ ...+..|... ....+... +|++.+....+..+.+
T Consensus 101 --~~v~~~~~~~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~~~~~d~~i~i 172 (377)
T 3dwl_C 101 --RAATFVRWSPNEDKFAVGSGA---RVISVCYFEQENDWWVSKHLKRPLRS---TILSLDWHPNNVLLAAGCADRKAYV 172 (377)
T ss_dssp --SCEEEEECCTTSSCCEEEESS---SCEEECCC-----CCCCEEECSSCCS---CEEEEEECTTSSEEEEEESSSCEEE
T ss_pred --CceEEEEECCCCCEEEEEecC---CeEEEEEECCcccceeeeEeecccCC---CeEEEEEcCCCCEEEEEeCCCEEEE
Confidence 00011221 34433333332 367788888765 3333332211 22233333 6777777777889999
Q ss_pred EEEcccCC-----CCCe-------EEEEEecCCCCeeEEEEEeCCeEEE-EECCcEEEEEECCCCcE
Q 047931 261 WIMKEYGV-----KESW-------TRVFIHQDPNNVWPLCLWKNSTKLL-VINRKNLLVCDCNNEGS 314 (339)
Q Consensus 261 W~l~~~~~-----~~~W-------~~~~~i~~~~~~~~~~~~~~~~i~~-~~~~~~~~~yd~~t~~~ 314 (339)
|.++..+. ...| ....++...-.+.-+++.++|+.++ ...++.+..||+++++.
T Consensus 173 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 173 LSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp EEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred EEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence 99963210 1122 2222221111255667777776555 44566799999988874
No 39
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=93.65 E-value=3.1 Score=35.66 Aligned_cols=185 Identities=10% Similarity=0.048 Sum_probs=93.6
Q ss_pred CCCEEEEEcccccce---eecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEEecccCC
Q 047931 110 KPKIFFVLNPLTRES---KRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRVLASGY 185 (339)
Q Consensus 110 ~~~~~~V~NP~T~~~---~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~~~ 185 (339)
.+..+.++|..++++ ..+...... ...+.+ ..+.+-+..-. ...+.+|+.+++.+........
T Consensus 28 ~d~~v~i~~~~~~~~~~~~~~~~h~~~--------v~~~~~~~~~~~l~~~~~-----dg~i~vwd~~~~~~~~~~~~~~ 94 (372)
T 1k8k_C 28 NNHEVHIYEKSGNKWVQVHELKEHNGQ--------VTGVDWAPDSNRIVTCGT-----DRNAYVWTLKGRTWKPTLVILR 94 (372)
T ss_dssp SSSEEEEEEEETTEEEEEEEEECCSSC--------EEEEEEETTTTEEEEEET-----TSCEEEEEEETTEEEEEEECCC
T ss_pred CCCEEEEEeCCCCcEEeeeeecCCCCc--------ccEEEEeCCCCEEEEEcC-----CCeEEEEECCCCeeeeeEEeec
Confidence 456788888888753 333222111 455555 33444333322 4568889998887765422211
Q ss_pred ccCccCCCceEE--CCeEEEEEecCCCCeEEEEEECCCce----eeeecCCCCCCCCceeEEEEE-CCeEEEEEeCCCeE
Q 047931 186 TRPLINVPGTLT--NGALHWRLQKHGGDFVLAAFDLVEER----FKEFPLPDASTSFRFFGTGVL-GDCLCLQFFKGKMK 258 (339)
Q Consensus 186 ~~~~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~~~----~~~i~lP~~~~~~~~~~l~~~-~G~L~~v~~~~~~l 258 (339)
.. .....+.+ +|.....+..+ ..+..+|+.+.+ ...+..+... ....+... +|.+.++...+..+
T Consensus 95 ~~--~~v~~~~~~~~~~~l~~~~~d---~~v~i~d~~~~~~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~~~~~dg~i 166 (372)
T 1k8k_C 95 IN--RAARCVRWAPNEKKFAVGSGS---RVISICYFEQENDWWVCKHIKKPIRS---TVLSLDWHPNSVLLAAGSCDFKC 166 (372)
T ss_dssp CS--SCEEEEEECTTSSEEEEEETT---SSEEEEEEETTTTEEEEEEECTTCCS---CEEEEEECTTSSEEEEEETTSCE
T ss_pred CC--CceeEEEECCCCCEEEEEeCC---CEEEEEEecCCCcceeeeeeecccCC---CeeEEEEcCCCCEEEEEcCCCCE
Confidence 10 00111222 35444444332 345566655543 2222222111 12233333 67777666688899
Q ss_pred EEEEEcccCC-----CCCe-------EEEEEecCC-CCeeEEEEEeCCeEEEE-ECCcEEEEEECCCCcEE
Q 047931 259 EHWIMKEYGV-----KESW-------TRVFIHQDP-NNVWPLCLWKNSTKLLV-INRKNLLVCDCNNEGSE 315 (339)
Q Consensus 259 ~iW~l~~~~~-----~~~W-------~~~~~i~~~-~~~~~~~~~~~~~i~~~-~~~~~~~~yd~~t~~~~ 315 (339)
.+|.++.... ...| ..+..+... -.+.-+++.++++.++. ..++.+..||+++++..
T Consensus 167 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 237 (372)
T 1k8k_C 167 RIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAV 237 (372)
T ss_dssp EEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEE
T ss_pred EEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCcee
Confidence 9999752110 0112 223333221 12556667677765554 45667999999877743
No 40
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=93.45 E-value=2.8 Score=34.62 Aligned_cols=188 Identities=9% Similarity=-0.000 Sum_probs=96.1
Q ss_pred eeCceEEEcc-CCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEeeeCCceEEEEEeeEeCCCcEEEEEEeCCCceE
Q 047931 100 SCNGLVCTTP-KPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGCTAEDCKFIKVSFGLKPNMSVAIFSLRMNSWR 178 (339)
Q Consensus 100 s~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~ 178 (339)
..+|.+.+.. ....++++|| +++......+... ....++.+..+. ++.... .....+.+|+. ++...
T Consensus 107 ~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~------~~~~~i~~~~~g-~l~v~~---~~~~~i~~~~~-~g~~~ 174 (299)
T 2z2n_A 107 GPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKG------SYPSFITLGSDN-ALWFTE---NQNNAIGRITE-SGDIT 174 (299)
T ss_dssp CTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTT------CCEEEEEECTTS-CEEEEE---TTTTEEEEECT-TCCEE
T ss_pred CCCCCEEEEecCCceEEEECC-CCCEEEecCCCCC------CCCceEEEcCCC-CEEEEe---CCCCEEEEEcC-CCcEE
Confidence 3466665543 3568999999 7766554322111 013344442222 222211 12345677777 66665
Q ss_pred EecccCCccCccCCCceEE--CCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCeEEEEEeCC
Q 047931 179 RVLASGYTRPLINVPGTLT--NGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDCLCLQFFKG 255 (339)
Q Consensus 179 ~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~L~~v~~~~ 255 (339)
... .+... ....++.+ +|.+|+..... ..|..+|. +.++..+.+|.... ....+... +|.|++.....
T Consensus 175 ~~~-~~~~~--~~~~~i~~~~~g~l~v~~~~~---~~i~~~~~-~g~~~~~~~~~~~~--~~~~i~~~~~g~l~v~~~~~ 245 (299)
T 2z2n_A 175 EFK-IPTPA--SGPVGITKGNDDALWFVEIIG---NKIGRITT-SGEITEFKIPTPNA--RPHAITAGAGIDLWFTEWGA 245 (299)
T ss_dssp EEE-CSSTT--CCEEEEEECTTSSEEEEETTT---TEEEEECT-TCCEEEEECSSTTC--CEEEEEECSTTCEEEEETTT
T ss_pred Eee-CCCCC--CcceeEEECCCCCEEEEccCC---ceEEEECC-CCcEEEEECCCCCC--CceeEEECCCCCEEEeccCC
Confidence 541 11111 11123433 47875544322 47999999 77777776664322 22344444 78888877666
Q ss_pred CeEEEEEEcccCCCCCeEEEEEecCCC-CeeEEEEEeCCeEEEEECCcEEEEEECCCCcEE
Q 047931 256 KMKEHWIMKEYGVKESWTRVFIHQDPN-NVWPLCLWKNSTKLLVINRKNLLVCDCNNEGSE 315 (339)
Q Consensus 256 ~~l~iW~l~~~~~~~~W~~~~~i~~~~-~~~~~~~~~~~~i~~~~~~~~~~~yd~~t~~~~ 315 (339)
..+.+|..+ .+. ..+.++... ...-+++ .+|.+++......+..||+++++++
T Consensus 246 ~~i~~~d~~-----g~~-~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~~~~~~ 299 (299)
T 2z2n_A 246 NKIGRLTSN-----NII-EEYPIQIKSAEPHGICF-DGETIWFAMECDKIGKLTLIKDNME 299 (299)
T ss_dssp TEEEEEETT-----TEE-EEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEEEEEC-----
T ss_pred ceEEEECCC-----Cce-EEEeCCCCCCccceEEe-cCCCEEEEecCCcEEEEEcCcccCC
Confidence 666665442 111 122232211 2344555 6778888766667999999988753
No 41
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=93.33 E-value=3.7 Score=35.64 Aligned_cols=114 Identities=10% Similarity=0.082 Sum_probs=65.8
Q ss_pred CCceEECCeEEEEEecCCCCeEEEEEECCCceee-eecCCCCC------CCCceeEEEEECCeEEEEEeCCCeEEEEEEc
Q 047931 192 VPGTLTNGALHWRLQKHGGDFVLAAFDLVEERFK-EFPLPDAS------TSFRFFGTGVLGDCLCLQFFKGKMKEHWIMK 264 (339)
Q Consensus 192 ~~~v~~~G~lyw~~~~~~~~~~il~fD~~~~~~~-~i~lP~~~------~~~~~~~l~~~~G~L~~v~~~~~~l~iW~l~ 264 (339)
..++..+|.+|.....+ .+.+||.++.+.. ..+++... ...........+|.+++...+ ..+ ..++
T Consensus 47 ~~p~v~~~~v~~~~~~g----~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~-g~l--~a~d 119 (376)
T 3q7m_A 47 LHPALADNVVYAADRAG----LVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK-AQV--YALN 119 (376)
T ss_dssp CCCEEETTEEEEECTTS----EEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETT-SEE--EEEE
T ss_pred eccEEECCEEEEEcCCC----eEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCC-CEE--EEEE
Confidence 45788999999876654 8999999765432 23443321 111233455668888775543 333 4444
Q ss_pred ccCCCCCeEEEEEecCCCCeeEEEEEeCCeEEEEECCcEEEEEECCCCcEEE
Q 047931 265 EYGVKESWTRVFIHQDPNNVWPLCLWKNSTKLLVINRKNLLVCDCNNEGSED 316 (339)
Q Consensus 265 ~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~yd~~t~~~~~ 316 (339)
....+..|.. .+.......|.. .++.+++...+..++.+|.+|++...
T Consensus 120 ~~tG~~~W~~--~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W 167 (376)
T 3q7m_A 120 TSDGTVAWQT--KVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKW 167 (376)
T ss_dssp TTTCCEEEEE--ECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCCCCEEEEE--eCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEE
Confidence 2212356754 232222123332 25667776667789999999988553
No 42
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=93.14 E-value=3.4 Score=34.66 Aligned_cols=194 Identities=10% Similarity=0.017 Sum_probs=98.9
Q ss_pred eCceEEEccCCCEEEEEccccccee-ecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceE
Q 047931 101 CNGLVCTTPKPKIFFVLNPLTRESK-RIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWR 178 (339)
Q Consensus 101 ~~GLl~~~~~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~ 178 (339)
-+|-+++...++.+.++|..+++.. .+...... ........+.+ ..+.+-+..-. ...+.+|+.+++...
T Consensus 61 ~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~~~d~~~~~~~ 132 (337)
T 1gxr_A 61 NPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCL---NRDNYIRSCKLLPDGCTLIVGGE-----ASTLSIWDLAAPTPR 132 (337)
T ss_dssp SSSSEEEEECBSEEEEEETTSTTCCSCSEEEECS---CTTSBEEEEEECTTSSEEEEEES-----SSEEEEEECCCC--E
T ss_pred cCCcEEEEcCCCeEEEEECCCCCceeeeeccccc---CCCCcEEEEEEcCCCCEEEEEcC-----CCcEEEEECCCCCcc
Confidence 3443333323678888888776422 11111100 00111444555 33443333322 457889998887754
Q ss_pred EecccCCccCccCCCceEE--CCeEEEEEecCCCCeEEEEEECCCceeee-ecCCCCCCCCceeEEEEE-CCeEEEEEeC
Q 047931 179 RVLASGYTRPLINVPGTLT--NGALHWRLQKHGGDFVLAAFDLVEERFKE-FPLPDASTSFRFFGTGVL-GDCLCLQFFK 254 (339)
Q Consensus 179 ~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~~~~~~-i~lP~~~~~~~~~~l~~~-~G~L~~v~~~ 254 (339)
....+..... ....+.+ +|.....+... ..|..+|+.+.+... +..... ....+... +|...++...
T Consensus 133 ~~~~~~~~~~--~i~~~~~~~~~~~l~~~~~d---g~v~~~d~~~~~~~~~~~~~~~----~i~~~~~~~~~~~l~~~~~ 203 (337)
T 1gxr_A 133 IKAELTSSAP--ACYALAISPDSKVCFSCCSD---GNIAVWDLHNQTLVRQFQGHTD----GASCIDISNDGTKLWTGGL 203 (337)
T ss_dssp EEEEEECSSS--CEEEEEECTTSSEEEEEETT---SCEEEEETTTTEEEEEECCCSS----CEEEEEECTTSSEEEEEET
T ss_pred eeeecccCCC--ceEEEEECCCCCEEEEEeCC---CcEEEEeCCCCceeeeeecccC----ceEEEEECCCCCEEEEEec
Confidence 4322211100 0011222 45444444443 468889998765433 332111 12233333 7777777778
Q ss_pred CCeEEEEEEcccCCCCCeEEEEEecCCCCeeEEEEEeCCeEEEEE-CCcEEEEEECCCCcEEEe
Q 047931 255 GKMKEHWIMKEYGVKESWTRVFIHQDPNNVWPLCLWKNSTKLLVI-NRKNLLVCDCNNEGSEDV 317 (339)
Q Consensus 255 ~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~i~~~~-~~~~~~~yd~~t~~~~~v 317 (339)
+..+.+|.++.. .....+...-...-+++.++++.++.. .++.+..||+++++...+
T Consensus 204 dg~i~~~d~~~~------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~ 261 (337)
T 1gxr_A 204 DNTVRSWDLREG------RQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL 261 (337)
T ss_dssp TSEEEEEETTTT------EEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEE
T ss_pred CCcEEEEECCCC------ceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEE
Confidence 889999988751 222333332225566677777655544 456799999998876544
No 43
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=93.11 E-value=4 Score=35.41 Aligned_cols=193 Identities=11% Similarity=0.009 Sum_probs=94.5
Q ss_pred EeeeCceEEEccCCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEeeeCCceEEEEEeeEeCCCcEEEEEEeCCC--
Q 047931 98 VGSCNGLVCTTPKPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGCTAEDCKFIKVSFGLKPNMSVAIFSLRMN-- 175 (339)
Q Consensus 98 ~~s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~ykvv~~~~~~~~~~~~~vyss~~~-- 175 (339)
....+|.+.+......++.+|+.|++.+.--..... ... .... .+. +|+... ..-.+..|+.+++
T Consensus 99 ~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~----~~~-~p~~---~~~-~v~v~~----~~g~l~~~d~~tG~~ 165 (376)
T 3q7m_A 99 VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGE----ALS-RPVV---SDG-LVLIHT----SNGQLQALNEADGAV 165 (376)
T ss_dssp EEEETTEEEEEETTSEEEEEETTTCCEEEEEECSSC----CCS-CCEE---ETT-EEEEEC----TTSEEEEEETTTCCE
T ss_pred ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCc----eEc-CCEE---ECC-EEEEEc----CCCeEEEEECCCCcE
Confidence 444678777766667899999999874321111111 000 0000 112 222211 1345777887665
Q ss_pred ceEEecccCCccCccCCCceEECCeEEEEEecCCCCeEEEEEECCCce--eeee-cCCCCCC---C--CceeEEEEECCe
Q 047931 176 SWRRVLASGYTRPLINVPGTLTNGALHWRLQKHGGDFVLAAFDLVEER--FKEF-PLPDAST---S--FRFFGTGVLGDC 247 (339)
Q Consensus 176 ~W~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~~~--~~~i-~lP~~~~---~--~~~~~l~~~~G~ 247 (339)
.|+.....+.........++..+|.+|.-...+ .+.++|.++.+ |+.- ..|.... . .........+|.
T Consensus 166 ~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~g----~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 241 (376)
T 3q7m_A 166 KWTVNLDMPSLSLRGESAPTTAFGAAVVGGDNG----RVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGV 241 (376)
T ss_dssp EEEEECCC-----CCCCCCEEETTEEEECCTTT----EEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTE
T ss_pred EEEEeCCCCceeecCCCCcEEECCEEEEEcCCC----EEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCE
Confidence 587653222111111234567788877654443 89999998764 3332 2222110 0 001112334666
Q ss_pred EEEEEeCCCeEEEEEEcccCCCCCeEEEEEecCCCCeeEEEEEeCCeEEEEECCcEEEEEECCCCcEEE
Q 047931 248 LCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQDPNNVWPLCLWKNSTKLLVINRKNLLVCDCNNEGSED 316 (339)
Q Consensus 248 L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~yd~~t~~~~~ 316 (339)
+++... ...+..+..+. .+..|... +.. .....+ .++.+++...+..++.+|.+|++...
T Consensus 242 v~~~~~-~g~l~~~d~~t--G~~~w~~~--~~~---~~~~~~-~~~~l~~~~~~g~l~~~d~~tG~~~w 301 (376)
T 3q7m_A 242 VFALAY-NGNLTALDLRS--GQIMWKRE--LGS---VNDFIV-DGNRIYLVDQNDRVMALTIDGGVTLW 301 (376)
T ss_dssp EEEECT-TSCEEEEETTT--CCEEEEEC--CCC---EEEEEE-ETTEEEEEETTCCEEEEETTTCCEEE
T ss_pred EEEEec-CcEEEEEECCC--CcEEeecc--CCC---CCCceE-ECCEEEEEcCCCeEEEEECCCCcEEE
Confidence 666543 22333333322 22456532 111 122222 35567777766689999999998654
No 44
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=92.90 E-value=3.2 Score=35.96 Aligned_cols=192 Identities=9% Similarity=-0.074 Sum_probs=90.2
Q ss_pred eCceEEEccCCCEEEEEcccccceeecCCCCCCCCCCCCC-CeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceE
Q 047931 101 CNGLVCTTPKPKIFFVLNPLTRESKRIPDVPFEPFPRSSD-DLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWR 178 (339)
Q Consensus 101 ~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~-~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~ 178 (339)
-+|.++....++.+.|||..+++.......... .+. ....+.+ ..+.+-+.+-. .-.+.+++.+++.-.
T Consensus 104 ~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~----~h~~~V~~v~~spdg~~l~sgs~-----dg~v~iwd~~~~~~~ 174 (357)
T 4g56_B 104 SEKGILVASDSGAVELWEILEKESLLVNKFAKY----EHDDIVKTLSVFSDGTQAVSGGK-----DFSVKVWDLSQKAVL 174 (357)
T ss_dssp TTTEEEEEETTSCEEEC--------CCCCEEEC----CCSSCEEEEEECSSSSEEEEEET-----TSCEEEEETTTTEEE
T ss_pred CCCCEEEEECCCEEEEeeccccceeEEEeeccC----CCCCCEEEEEECCCCCEEEEEeC-----CCeEEEEECCCCcEE
Confidence 345554444567889999988875443332211 111 1455666 34444333322 446788888776432
Q ss_pred EecccCCccCccCCCceEE--CCe-EEEEEecCCCCeEEEEEECCCceeee-ecCCCCCCCCceeEEEEE--CCeEEEEE
Q 047931 179 RVLASGYTRPLINVPGTLT--NGA-LHWRLQKHGGDFVLAAFDLVEERFKE-FPLPDASTSFRFFGTGVL--GDCLCLQF 252 (339)
Q Consensus 179 ~~~~~~~~~~~~~~~~v~~--~G~-lyw~~~~~~~~~~il~fD~~~~~~~~-i~lP~~~~~~~~~~l~~~--~G~L~~v~ 252 (339)
.. +.... .....+.+ +|. +...+..+ ..|..+|+++.+... +...... .....+.-. ++.+.++.
T Consensus 175 ~~--~~~h~--~~v~~v~~s~~~~~~~~s~~~d---g~v~~wd~~~~~~~~~~~~~~~~--~~v~~v~~sp~~~~~la~g 245 (357)
T 4g56_B 175 KS--YNAHS--SEVNCVAACPGKDTIFLSCGED---GRILLWDTRKPKPATRIDFCASD--TIPTSVTWHPEKDDTFACG 245 (357)
T ss_dssp EE--ECCCS--SCEEEEEECTTCSSCEEEEETT---SCEEECCTTSSSCBCBCCCTTCC--SCEEEEEECTTSTTEEEEE
T ss_pred EE--EcCCC--CCEEEEEEccCCCceeeeeccC---CceEEEECCCCceeeeeeecccc--ccccchhhhhcccceEEEe
Confidence 22 11100 00111222 232 22222222 367788887755332 2222111 112233333 45666666
Q ss_pred eCCCeEEEEEEcccCCCCCeEEEEEecCC-CCeeEEEEEeCC-eEEEE-ECCcEEEEEECCCCcEEE
Q 047931 253 FKGKMKEHWIMKEYGVKESWTRVFIHQDP-NNVWPLCLWKNS-TKLLV-INRKNLLVCDCNNEGSED 316 (339)
Q Consensus 253 ~~~~~l~iW~l~~~~~~~~W~~~~~i~~~-~~~~~~~~~~~~-~i~~~-~~~~~~~~yd~~t~~~~~ 316 (339)
..+..+.+|.++... ...++... -.+.-+++.+++ .++.. ..++.+.+||.++++...
T Consensus 246 ~~d~~i~~wd~~~~~------~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~ 306 (357)
T 4g56_B 246 DETGNVSLVNIKNPD------SAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFR 306 (357)
T ss_dssp ESSSCEEEEESSCGG------GCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEE
T ss_pred ecccceeEEECCCCc------EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeE
Confidence 678889999887521 12233221 125566777666 45543 345679999999987554
No 45
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=92.89 E-value=1.4 Score=36.83 Aligned_cols=110 Identities=11% Similarity=-0.096 Sum_probs=67.8
Q ss_pred EECCeEEEEEecCCCCeEEEEEECCCcee-eeecCCCCCCCCceeEEEEECCeEEEEEeCCCeEEEEEEcccCCCCCeEE
Q 047931 196 LTNGALHWRLQKHGGDFVLAAFDLVEERF-KEFPLPDASTSFRFFGTGVLGDCLCLQFFKGKMKEHWIMKEYGVKESWTR 274 (339)
Q Consensus 196 ~~~G~lyw~~~~~~~~~~il~fD~~~~~~-~~i~lP~~~~~~~~~~l~~~~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~ 274 (339)
+.+|.+|--+... ..|..+|+++.+. +.+ +|+.. +...+...+++|+++...+..+-++..+ +-.+
T Consensus 62 ~~~~~Ly~stG~~---g~v~~iD~~Tgkv~~~~-l~~~~---FgeGit~~g~~Ly~ltw~~~~v~V~D~~------Tl~~ 128 (268)
T 3nok_A 62 FHQGHFFESTGHQ---GTLRQLSLESAQPVWME-RLGNI---FAEGLASDGERLYQLTWTEGLLFTWSGM------PPQR 128 (268)
T ss_dssp EETTEEEEEETTT---TEEEECCSSCSSCSEEE-ECTTC---CEEEEEECSSCEEEEESSSCEEEEEETT------TTEE
T ss_pred EECCEEEEEcCCC---CEEEEEECCCCcEEeEE-CCCCc---ceeEEEEeCCEEEEEEccCCEEEEEECC------cCcE
Confidence 4456666655443 3599999998765 445 66644 3445677789999987766665544443 2455
Q ss_pred EEEecCCCCeeEEEEEeCCe-EEEEECCcEEEEEECCCCcE-EEeEEe
Q 047931 275 VFIHQDPNNVWPLCLWKNST-KLLVINRKNLLVCDCNNEGS-EDVAVA 320 (339)
Q Consensus 275 ~~~i~~~~~~~~~~~~~~~~-i~~~~~~~~~~~yd~~t~~~-~~v~~~ 320 (339)
+.+|+..- ...++..+|+ +++..++.++..+|++|.+. +.+.+.
T Consensus 129 ~~ti~~~~--eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~ 174 (268)
T 3nok_A 129 ERTTRYSG--EGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVK 174 (268)
T ss_dssp EEEEECSS--CCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECE
T ss_pred EEEEeCCC--ceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeC
Confidence 56665421 1234444554 44444456799999999774 456553
No 46
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=92.80 E-value=3.7 Score=34.23 Aligned_cols=111 Identities=10% Similarity=-0.068 Sum_probs=68.8
Q ss_pred CeEEEEEecCCCCeEEEEEECCCcee-eeecCCCCCCCCceeEEEEECCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEE
Q 047931 199 GALHWRLQKHGGDFVLAAFDLVEERF-KEFPLPDASTSFRFFGTGVLGDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFI 277 (339)
Q Consensus 199 G~lyw~~~~~~~~~~il~fD~~~~~~-~~i~lP~~~~~~~~~~l~~~~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~ 277 (339)
|.+|--+... ....|..+|+++.+. ..+++|... +...++..+++||+....+..+.+...+ +-..+.+
T Consensus 32 g~Lyvstg~~-~~s~v~~iD~~tg~v~~~i~l~~~~---fgeGi~~~g~~lyv~t~~~~~v~viD~~------t~~v~~~ 101 (266)
T 2iwa_A 32 DTLFESTGLY-GRSSVRQVALQTGKVENIHKMDDSY---FGEGLTLLNEKLYQVVWLKNIGFIYDRR------TLSNIKN 101 (266)
T ss_dssp TEEEEEECST-TTCEEEEEETTTCCEEEEEECCTTC---CEEEEEEETTEEEEEETTCSEEEEEETT------TTEEEEE
T ss_pred CeEEEECCCC-CCCEEEEEECCCCCEEEEEecCCCc---ceEEEEEeCCEEEEEEecCCEEEEEECC------CCcEEEE
Confidence 6677655421 135899999998765 456776543 3344566688999888766665543333 3455666
Q ss_pred ecCCCCeeEEEEEeCCe-EEEEECCcEEEEEECCCCc-EEEeEEe
Q 047931 278 HQDPNNVWPLCLWKNST-KLLVINRKNLLVCDCNNEG-SEDVAVA 320 (339)
Q Consensus 278 i~~~~~~~~~~~~~~~~-i~~~~~~~~~~~yd~~t~~-~~~v~~~ 320 (339)
|+... -...++..+|+ +++...+..+.++|++|.+ .+.+.+.
T Consensus 102 i~~g~-~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg 145 (266)
T 2iwa_A 102 FTHQM-KDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVK 145 (266)
T ss_dssp EECCS-SSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECE
T ss_pred EECCC-CCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEEC
Confidence 65321 22455665664 5555555579999999977 4465543
No 47
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=92.68 E-value=4.9 Score=35.34 Aligned_cols=188 Identities=12% Similarity=-0.021 Sum_probs=99.8
Q ss_pred eCceEEEc-cCCCEEEEEccccccee-ecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCce
Q 047931 101 CNGLVCTT-PKPKIFFVLNPLTRESK-RIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSW 177 (339)
Q Consensus 101 ~~GLl~~~-~~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W 177 (339)
.+|-+++. ..+..+.++|+-+++.. .++..... ..++.+ ..+.+-++.. .....+.+|+.+++..
T Consensus 179 ~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~~~~----~~~~~i~~~d~~~~~~ 246 (433)
T 3bws_A 179 EHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKW--------SKILLYDPIRDLVYCSN----WISEDISVIDRKTKLE 246 (433)
T ss_dssp GGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSS--------EEEEEEETTTTEEEEEE----TTTTEEEEEETTTTEE
T ss_pred CCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCC--------eeEEEEcCCCCEEEEEe----cCCCcEEEEECCCCcE
Confidence 34544433 24568888988876543 33311111 444555 3344433332 1245788899887755
Q ss_pred EEecccCCccCccCCCceEE--CCeEEEEEecC-C----CCeEEEEEECCCceeeee-cCCCCCCCCceeEEEEE-CC-e
Q 047931 178 RRVLASGYTRPLINVPGTLT--NGALHWRLQKH-G----GDFVLAAFDLVEERFKEF-PLPDASTSFRFFGTGVL-GD-C 247 (339)
Q Consensus 178 ~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~-~----~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~l~~~-~G-~ 247 (339)
...-..... ..++.+ +|...+.+... + ....|..+|+.+.+.... ..+.. ...+... +| .
T Consensus 247 ~~~~~~~~~-----~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~-----~~~~~~~~~g~~ 316 (433)
T 3bws_A 247 IRKTDKIGL-----PRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGN-----KRHIVSGNTENK 316 (433)
T ss_dssp EEECCCCSE-----EEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEEC-----EEEEEECSSTTE
T ss_pred EEEecCCCC-----ceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCC-----cceEEECCCCCE
Confidence 332111111 112222 56555555432 1 135888999987765433 22111 1123322 55 4
Q ss_pred EEEEEeCCCeEEEEEEcccCCCCCeEEEEEecCCCCeeEEEEEeCCeEEEEECC----------------cEEEEEECCC
Q 047931 248 LCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQDPNNVWPLCLWKNSTKLLVINR----------------KNLLVCDCNN 311 (339)
Q Consensus 248 L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~i~~~~~~----------------~~~~~yd~~t 311 (339)
|++.......+.+|.++. ......+...-...-+++.++|+.++.... +.+..||.++
T Consensus 317 l~~~~~~~~~v~v~d~~~------~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~ 390 (433)
T 3bws_A 317 IYVSDMCCSKIEVYDLKE------KKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT 390 (433)
T ss_dssp EEEEETTTTEEEEEETTT------TEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT
T ss_pred EEEEecCCCEEEEEECCC------CcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCC
Confidence 666556888999998874 223344443223556677778865554432 3799999998
Q ss_pred CcEEE
Q 047931 312 EGSED 316 (339)
Q Consensus 312 ~~~~~ 316 (339)
++...
T Consensus 391 ~~~~~ 395 (433)
T 3bws_A 391 DTVKE 395 (433)
T ss_dssp TEEEE
T ss_pred CcEEE
Confidence 87554
No 48
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=92.38 E-value=4.8 Score=34.52 Aligned_cols=115 Identities=11% Similarity=0.014 Sum_probs=65.6
Q ss_pred CCeEEEEEecCCCCeEEEEEECCCceeeee----cCCCCCCCCceeEEEEE-CCeEEEEEe-C-CCeEEEEEEcccCCCC
Q 047931 198 NGALHWRLQKHGGDFVLAAFDLVEERFKEF----PLPDASTSFRFFGTGVL-GDCLCLQFF-K-GKMKEHWIMKEYGVKE 270 (339)
Q Consensus 198 ~G~lyw~~~~~~~~~~il~fD~~~~~~~~i----~lP~~~~~~~~~~l~~~-~G~L~~v~~-~-~~~l~iW~l~~~~~~~ 270 (339)
+|...++.... ...|..+|+.+.++..+ ..|.... ....+... +|+..++.. . ...+.||.++.. ..
T Consensus 221 dg~~l~v~~~~--~~~v~v~~~~~g~~~~~~~~~~~~~~~~--~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~--~g 294 (361)
T 3scy_A 221 DGKFAYLINEI--GGTVIAFRYADGMLDEIQTVAADTVNAQ--GSGDIHLSPDGKYLYASNRLKADGVAIFKVDET--NG 294 (361)
T ss_dssp TSSEEEEEETT--TCEEEEEEEETTEEEEEEEEESCSSCCC--CEEEEEECTTSSEEEEEECSSSCEEEEEEECTT--TC
T ss_pred CCCEEEEEcCC--CCeEEEEEecCCceEEeEEEecCCCCCC--CcccEEECCCCCEEEEECCCCCCEEEEEEEcCC--CC
Confidence 57544444322 14688888877766443 2222221 12234444 777544444 5 689999999732 24
Q ss_pred CeEEEEEecCCCCeeEEEEEeCCeEEEEEC--CcE--EEEEECCCCcEEEeE
Q 047931 271 SWTRVFIHQDPNNVWPLCLWKNSTKLLVIN--RKN--LLVCDCNNEGSEDVA 318 (339)
Q Consensus 271 ~W~~~~~i~~~~~~~~~~~~~~~~i~~~~~--~~~--~~~yd~~t~~~~~v~ 318 (339)
++..+..+.......-+++.++|+.++... +.. ++.+|.++++++.+.
T Consensus 295 ~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 295 TLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp CEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECS
T ss_pred cEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecc
Confidence 566666665421134567778887555443 334 445788899988773
No 49
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=92.08 E-value=5.2 Score=34.25 Aligned_cols=180 Identities=8% Similarity=0.041 Sum_probs=90.3
Q ss_pred CCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEEecccCCccC
Q 047931 110 KPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRVLASGYTRP 188 (339)
Q Consensus 110 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~~~ 188 (339)
.+..+.|+|..++++......... -......+.+ ..+.+-+.+-. ...+.+++..++.++.+..+.....
T Consensus 36 ~D~~i~iw~~~~~~~~~~~~~~~~----h~~~v~~~~~sp~g~~l~s~s~-----D~~v~iw~~~~~~~~~~~~~~~h~~ 106 (345)
T 3fm0_A 36 GDRRIRIWGTEGDSWICKSVLSEG----HQRTVRKVAWSPCGNYLASASF-----DATTCIWKKNQDDFECVTTLEGHEN 106 (345)
T ss_dssp TTSCEEEEEEETTEEEEEEEECSS----CSSCEEEEEECTTSSEEEEEET-----TSCEEEEEECCC-EEEEEEECCCSS
T ss_pred CCCeEEEEEcCCCcceeeeeeccc----cCCcEEEEEECCCCCEEEEEEC-----CCcEEEEEccCCCeEEEEEccCCCC
Confidence 456777888777654321111111 0001445555 33444333322 4457788877776655433221100
Q ss_pred ccCCCceEE--CCeEEEEEecCCCCeEEEEEECCCce-eeeec-CCCCCCCCceeEEEEE-CCeEEEEEeCCCeEEEEEE
Q 047931 189 LINVPGTLT--NGALHWRLQKHGGDFVLAAFDLVEER-FKEFP-LPDASTSFRFFGTGVL-GDCLCLQFFKGKMKEHWIM 263 (339)
Q Consensus 189 ~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~~~-~~~i~-lP~~~~~~~~~~l~~~-~G~L~~v~~~~~~l~iW~l 263 (339)
.-..+.+ +|.+...+..+ ..|..+|+.++. ...+. +..... .-..+.-. +|.+.+....+..+.+|.+
T Consensus 107 --~v~~v~~sp~~~~l~s~s~D---~~v~iwd~~~~~~~~~~~~~~~h~~--~v~~~~~~p~~~~l~s~s~d~~i~~w~~ 179 (345)
T 3fm0_A 107 --EVKSVAWAPSGNLLATCSRD---KSVWVWEVDEEDEYECVSVLNSHTQ--DVKHVVWHPSQELLASASYDDTVKLYRE 179 (345)
T ss_dssp --CEEEEEECTTSSEEEEEETT---SCEEEEEECTTSCEEEEEEECCCCS--CEEEEEECSSSSCEEEEETTSCEEEEEE
T ss_pred --CceEEEEeCCCCEEEEEECC---CeEEEEECCCCCCeEEEEEecCcCC--CeEEEEECCCCCEEEEEeCCCcEEEEEe
Confidence 0011222 34443333332 467777776542 22221 111111 11223322 6777666668889999998
Q ss_pred cccCCCCCeEEEEEecCC-CCeeEEEEEeCCeEEEEE-CCcEEEEEEC
Q 047931 264 KEYGVKESWTRVFIHQDP-NNVWPLCLWKNSTKLLVI-NRKNLLVCDC 309 (339)
Q Consensus 264 ~~~~~~~~W~~~~~i~~~-~~~~~~~~~~~~~i~~~~-~~~~~~~yd~ 309 (339)
+. ..|....++... -.+.-+++.++|+.++.. .++.+..||.
T Consensus 180 ~~----~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 180 EE----DDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp ET----TEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred cC----CCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEecc
Confidence 75 457776676542 225667777788766654 4556878874
No 50
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=91.62 E-value=3.3 Score=35.07 Aligned_cols=111 Identities=5% Similarity=-0.098 Sum_probs=62.6
Q ss_pred ECCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCeEEEEEeCC----CeEEEEEEcccCCCCC
Q 047931 197 TNGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDCLCLQFFKG----KMKEHWIMKEYGVKES 271 (339)
Q Consensus 197 ~~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~L~~v~~~~----~~l~iW~l~~~~~~~~ 271 (339)
-+|.+||..... ..|..+|+++.++..+..+... ....++.. +|+|++..... ..+.+|..+. ..
T Consensus 54 ~~g~l~~~~~~~---~~i~~~d~~~~~~~~~~~~~~~---~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~----~~ 123 (333)
T 2dg1_A 54 RQGQLFLLDVFE---GNIFKINPETKEIKRPFVSHKA---NPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG----DN 123 (333)
T ss_dssp TTSCEEEEETTT---CEEEEECTTTCCEEEEEECSSS---SEEEEEECTTSCEEEEECTTSSSCCEEEEECTTS----CS
T ss_pred CCCCEEEEECCC---CEEEEEeCCCCcEEEEeeCCCC---CcceEEECCCCcEEEEeCCCCCCCceEEEEeCCC----CE
Confidence 368888876543 4799999998887765322111 22344444 78888876633 4444443322 21
Q ss_pred eEEEEE-ecCCCCeeEEEEEeCCeEEEEECC-------cEEEEEECCCCcEEEe
Q 047931 272 WTRVFI-HQDPNNVWPLCLWKNSTKLLVINR-------KNLLVCDCNNEGSEDV 317 (339)
Q Consensus 272 W~~~~~-i~~~~~~~~~~~~~~~~i~~~~~~-------~~~~~yd~~t~~~~~v 317 (339)
-..... ........-+++.++|.+++.... ..++.+|.++++.+.+
T Consensus 124 ~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 124 LQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp CEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred EEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 111111 111111334556667777776542 4699999988777654
No 51
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=91.51 E-value=5.3 Score=33.17 Aligned_cols=194 Identities=7% Similarity=-0.060 Sum_probs=103.7
Q ss_pred eEEEccCCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEEecc
Q 047931 104 LVCTTPKPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRVLA 182 (339)
Q Consensus 104 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~ 182 (339)
|+........++.+||.++ ...+...... ..++.+ ..+. ++... .....+.+|+..++..+.+..
T Consensus 42 l~~~~~~~~~i~~~~~~~~-~~~~~~~~~~--------~~~l~~~~dg~--l~v~~---~~~~~i~~~d~~~g~~~~~~~ 107 (296)
T 3e5z_A 42 VIFSDVRQNRTWAWSDDGQ-LSPEMHPSHH--------QNGHCLNKQGH--LIACS---HGLRRLERQREPGGEWESIAD 107 (296)
T ss_dssp EEEEEGGGTEEEEEETTSC-EEEEESSCSS--------EEEEEECTTCC--EEEEE---TTTTEEEEECSTTCCEEEEEC
T ss_pred EEEEeCCCCEEEEEECCCC-eEEEECCCCC--------cceeeECCCCc--EEEEe---cCCCeEEEEcCCCCcEEEEee
Confidence 4444445678999999988 5555432222 344555 2333 22221 123568888888887766532
Q ss_pred cCCccCccCCCceE--ECCeEEEEEec--------------CCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE-C
Q 047931 183 SGYTRPLINVPGTL--TNGALHWRLQK--------------HGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-G 245 (339)
Q Consensus 183 ~~~~~~~~~~~~v~--~~G~lyw~~~~--------------~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~ 245 (339)
............+. -+|.+|..... ......|..+|.. .+...+.-. .. ....++.. +
T Consensus 108 ~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~--~~--~~~gi~~s~d 182 (296)
T 3e5z_A 108 SFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRD--RV--KPNGLAFLPS 182 (296)
T ss_dssp EETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECC--CS--SEEEEEECTT
T ss_pred ccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecC--CC--CCccEEECCC
Confidence 11110011111232 35777664210 0012478899987 555544211 11 11234443 6
Q ss_pred CeEEEEEeCCCeEEEEEEcccCCCCCe-EEEEEecCCC-CeeEEEEEeCCeEEEEECCcEEEEEECCCCcEEEeEEe
Q 047931 246 DCLCLQFFKGKMKEHWIMKEYGVKESW-TRVFIHQDPN-NVWPLCLWKNSTKLLVINRKNLLVCDCNNEGSEDVAVA 320 (339)
Q Consensus 246 G~L~~v~~~~~~l~iW~l~~~~~~~~W-~~~~~i~~~~-~~~~~~~~~~~~i~~~~~~~~~~~yd~~t~~~~~v~~~ 320 (339)
|++.++......+.+|.+++. .+. .....+.... ...-+++..+|.+++.. +..+..||++++.++.+...
T Consensus 183 g~~lv~~~~~~~i~~~~~~~~---g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~g~~~~~~~~~ 255 (296)
T 3e5z_A 183 GNLLVSDTGDNATHRYCLNAR---GETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPDGDELGRVLTP 255 (296)
T ss_dssp SCEEEEETTTTEEEEEEECSS---SCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTTSCEEEEEECS
T ss_pred CCEEEEeCCCCeEEEEEECCC---CcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCCCCEEEEEECC
Confidence 776644446778888888732 334 3333331111 12346677788888777 66799999997777777554
No 52
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=91.49 E-value=6.2 Score=33.90 Aligned_cols=71 Identities=6% Similarity=-0.164 Sum_probs=43.9
Q ss_pred CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecCC-CCeeEEEEEeCCeEEEEECCcEEEEEECCCCcEEEe
Q 047931 245 GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQDP-NNVWPLCLWKNSTKLLVINRKNLLVCDCNNEGSEDV 317 (339)
Q Consensus 245 ~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~-~~~~~~~~~~~~~i~~~~~~~~~~~yd~~t~~~~~v 317 (339)
+|++.+....+..+.||.++... .....+.++... ..+.-+++.++|.++....+..++.|+.....++..
T Consensus 216 ~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~ 287 (377)
T 3dwl_C 216 SGNALAYAGHDSSVTIAYPSAPE--QPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGNESGWAHT 287 (377)
T ss_dssp TSSCEEEEETTTEEC-CEECSTT--SCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCCC---CCS
T ss_pred CCCEEEEEeCCCcEEEEECCCCC--CcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeCCCceEEE
Confidence 77766666688899999998632 222223333332 125667788888888877777788888876554433
No 53
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=91.40 E-value=2.3 Score=37.66 Aligned_cols=118 Identities=14% Similarity=0.111 Sum_probs=72.1
Q ss_pred CCeEEEEEecCCCCeEEEEEECCCceeeeec-CC--------CCC-CCCceeEEEEE--CCeEEEEEeC-------CCeE
Q 047931 198 NGALHWRLQKHGGDFVLAAFDLVEERFKEFP-LP--------DAS-TSFRFFGTGVL--GDCLCLQFFK-------GKMK 258 (339)
Q Consensus 198 ~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~-lP--------~~~-~~~~~~~l~~~--~G~L~~v~~~-------~~~l 258 (339)
+|.++|.+..+ .+.++|+.++.-..+. .. ... ..... .++.. +++||+.... ...=
T Consensus 237 dG~~~~vs~~g----~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q-~~a~~~~~~~lyV~~~~~~~~~hk~~~~ 311 (386)
T 3sjl_D 237 AGRLVWPTYTG----KIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQ-QVAYHRALDRIYLLVDQRDEWRHKTASR 311 (386)
T ss_dssp TTEEEEEBTTS----EEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSS-CEEEETTTTEEEEEEEECCTTCTTSCEE
T ss_pred CCcEEEEeCCC----EEEEEECCCCcceeecceeccccccccccccCCCcc-eeeECCCCCeEEEEeccccccccCCCCC
Confidence 78999988875 7999999877543321 10 000 00011 13333 6788887641 2346
Q ss_pred EEEEEcccCCCCCeEEEEEecCCCCeeEEEEEeCCe-EEEEEC--CcEEEEEECCCCcE-EEeEEeCCCC
Q 047931 259 EHWIMKEYGVKESWTRVFIHQDPNNVWPLCLWKNST-KLLVIN--RKNLLVCDCNNEGS-EDVAVADVPN 324 (339)
Q Consensus 259 ~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~-i~~~~~--~~~~~~yd~~t~~~-~~v~~~~~~~ 324 (339)
+||+++- .++..+.+|...-...-+++..+++ .++..+ +..+.+||..|++. +.+...+.++
T Consensus 312 ~V~viD~----~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~p~ 377 (386)
T 3sjl_D 312 FVVVLDA----KTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGP 377 (386)
T ss_dssp EEEEEET----TTCCEEEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSC
T ss_pred EEEEEEC----CCCeEEEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCCCc
Confidence 8999985 4567777776521244677888875 555533 45799999999884 4565555443
No 54
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=91.39 E-value=7.1 Score=34.41 Aligned_cols=196 Identities=7% Similarity=0.023 Sum_probs=102.5
Q ss_pred eeCceEEEccCCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceE
Q 047931 100 SCNGLVCTTPKPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWR 178 (339)
Q Consensus 100 s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~ 178 (339)
|.+++|-..- ++.++|||..|++...+-..... . .....+.+ ..+.|-+.+-. ...+.+++.+++.-.
T Consensus 114 S~~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~----~-~~V~sv~fspdg~~lasgs~-----Dg~v~iWd~~~~~~~ 182 (420)
T 4gga_A 114 SSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQP----G-EYISSVAWIKEGNYLAVGTS-----SAEVQLWDVQQQKRL 182 (420)
T ss_dssp CTTSEEEEEE-TTEEEEEETTTCCEEEEEECCST----T-CCEEEEEECTTSSEEEEEET-----TSCEEEEETTTTEEE
T ss_pred CCCCEEEEEe-CCEEEEEECCCCCEEEEEEecCC----C-CcEEEEEECCCCCEEEEEEC-----CCeEEEEEcCCCcEE
Confidence 4456664443 67999999999987655332211 0 11556666 44555544432 456888888776432
Q ss_pred EecccCCccCccCCCceEECCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCeEEEEEeCCCe
Q 047931 179 RVLASGYTRPLINVPGTLTNGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDCLCLQFFKGKM 257 (339)
Q Consensus 179 ~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~L~~v~~~~~~ 257 (339)
.. +.... .....+..+|.+-..+... ..+..+|..+.......+..... ....+... +|...+....+..
T Consensus 183 ~~--~~~h~--~~v~~~s~~~~~l~sgs~d---~~i~~~d~~~~~~~~~~~~~h~~--~~~~~~~~~~g~~l~s~~~D~~ 253 (420)
T 4gga_A 183 RN--MTSHS--ARVGSLSWNSYILSSGSRS---GHIHHHDVRVAEHHVATLSGHSQ--EVCGLRWAPDGRHLASGGNDNL 253 (420)
T ss_dssp EE--ECCCS--SCEEEEEEETTEEEEEETT---SEEEEEETTSSSCEEEEEECCSS--CEEEEEECTTSSEEEEEETTSC
T ss_pred EE--EeCCC--CceEEEeeCCCEEEEEeCC---CceeEeeecccceeeEEeccccc--ceeeeeecCCCCeeeeeecccc
Confidence 11 11110 1112345566554444333 57777787764433322221111 11222222 6777766668888
Q ss_pred EEEEEEcccCCCCCeEEEEEecC-CCCeeEEEEEeCC-eEEEEE---CCcEEEEEECCCCcEEEe
Q 047931 258 KEHWIMKEYGVKESWTRVFIHQD-PNNVWPLCLWKNS-TKLLVI---NRKNLLVCDCNNEGSEDV 317 (339)
Q Consensus 258 l~iW~l~~~~~~~~W~~~~~i~~-~~~~~~~~~~~~~-~i~~~~---~~~~~~~yd~~t~~~~~v 317 (339)
+.||...... ..+........ .-.+..+++.+++ .++... .++.+.+||.++++....
T Consensus 254 v~i~~~~~~~--~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~ 316 (420)
T 4gga_A 254 VNVWPSAPGE--GGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSA 316 (420)
T ss_dssp EEEEESSCCS--SCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEE
T ss_pred ceEEeecccc--ccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcccccee
Confidence 9999887532 22222222222 1124455555544 455443 245688999988875543
No 55
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=90.88 E-value=6.8 Score=33.27 Aligned_cols=153 Identities=8% Similarity=0.000 Sum_probs=80.1
Q ss_pred CcEEEEEEeC-CCceEEecccCCccCccCC-CceEECCeEEEEEecCCCCeEEEEEECCCceeeee----cCCCCCCCC-
Q 047931 164 NMSVAIFSLR-MNSWRRVLASGYTRPLINV-PGTLTNGALHWRLQKHGGDFVLAAFDLVEERFKEF----PLPDASTSF- 236 (339)
Q Consensus 164 ~~~~~vyss~-~~~W~~~~~~~~~~~~~~~-~~v~~~G~lyw~~~~~~~~~~il~fD~~~~~~~~i----~lP~~~~~~- 236 (339)
...+.+|+.. ++................. -...-+|...++....+....+..+|..+.++..+ ..|......
T Consensus 161 ~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~ 240 (347)
T 3hfq_A 161 SDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHN 240 (347)
T ss_dssp TTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCC
T ss_pred CCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCC
Confidence 4578888887 5665544321111000000 01223576333333322233444455445655433 233322111
Q ss_pred ceeEEEEE-CCe-EEEEEeCCCeEEEEEEcccCCCCCeEEEEEecC-CCCeeEEEEEeCCeEEEEEC--CcEEEEE--EC
Q 047931 237 RFFGTGVL-GDC-LCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQD-PNNVWPLCLWKNSTKLLVIN--RKNLLVC--DC 309 (339)
Q Consensus 237 ~~~~l~~~-~G~-L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~-~~~~~~~~~~~~~~i~~~~~--~~~~~~y--d~ 309 (339)
....++.. +|+ |++.......+.+|.++.. ..+..+.++.. .....-+++.++|+.++..+ +..+.+| |.
T Consensus 241 ~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~---g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 241 GAAAIRLSHDGHFLYVSNRGYNTLAVFAVTAD---GHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDL 317 (347)
T ss_dssp EEEEEEECTTSCEEEEEEETTTEEEEEEECGG---GCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred cceeEEECCCCCEEEEEeCCCCEEEEEEECCC---CcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeC
Confidence 12234444 776 5555557889999999852 34666666654 11245677888887555443 2456666 88
Q ss_pred CCCcEEEeEE
Q 047931 310 NNEGSEDVAV 319 (339)
Q Consensus 310 ~t~~~~~v~~ 319 (339)
++++++.+.-
T Consensus 318 ~tg~l~~~~~ 327 (347)
T 3hfq_A 318 TSGKLSLLQK 327 (347)
T ss_dssp TTCCEEEEEE
T ss_pred CCCeEEeccc
Confidence 8999998754
No 56
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=90.28 E-value=6.4 Score=34.93 Aligned_cols=194 Identities=9% Similarity=0.040 Sum_probs=93.2
Q ss_pred eEEEccCCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEeee-CCceEEEEEeeEeCCCcEEEEEEeCCCceEEecc
Q 047931 104 LVCTTPKPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGCT-AEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRVLA 182 (339)
Q Consensus 104 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~-~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~ 182 (339)
+|.....++.+.|||..+++...+-..... . ....++.+. .+.-.++... ..-.+.+++.+++.-+....
T Consensus 134 ~lasGs~dg~i~lWd~~~~~~~~~~~~~gH----~-~~V~~l~f~p~~~~~l~s~s----~D~~v~iwd~~~~~~~~~~~ 204 (435)
T 4e54_B 134 TVAVGSKGGDIMLWNFGIKDKPTFIKGIGA----G-GSITGLKFNPLNTNQFYASS----MEGTTRLQDFKGNILRVFAS 204 (435)
T ss_dssp CEEEEETTSCEEEECSSCCSCCEEECCCSS----S-CCCCEEEECSSCTTEEEEEC----SSSCEEEEETTSCEEEEEEC
T ss_pred EEEEEeCCCEEEEEECCCCCceeEEEccCC----C-CCEEEEEEeCCCCCEEEEEe----CCCEEEEeeccCCceeEEec
Confidence 444444567889999988764333221111 0 014445552 2222333322 13457788887766555422
Q ss_pred cCCccCccCCCceEECCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCe-EEEEEeCCCeEEE
Q 047931 183 SGYTRPLINVPGTLTNGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDC-LCLQFFKGKMKEH 260 (339)
Q Consensus 183 ~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~-L~~v~~~~~~l~i 260 (339)
..........-...-+|.+...+... ..|..+|+.++....+..... .-..+... +|. +.+....+..+.|
T Consensus 205 ~~~~~~~~~~~~~~~~~~~l~~g~~d---g~i~~wd~~~~~~~~~~~h~~----~v~~v~~~p~~~~~~~s~s~d~~v~i 277 (435)
T 4e54_B 205 SDTINIWFCSLDVSASSRMVVTGDNV---GNVILLNMDGKELWNLRMHKK----KVTHVALNPCCDWFLATASVDQTVKI 277 (435)
T ss_dssp CSSCSCCCCCEEEETTTTEEEEECSS---SBEEEEESSSCBCCCSBCCSS----CEEEEEECTTCSSEEEEEETTSBCCE
T ss_pred cCCCCccEEEEEECCCCCEEEEEeCC---CcEeeeccCcceeEEEecccc----eEEeeeecCCCceEEEEecCcceeeE
Confidence 11110000010122245544444332 468888887655443322111 11223332 454 5545557888999
Q ss_pred EEEcccCCCCCeEEEEEecCCCCeeEEEEEeCCeEEEEE-CCcEEEEEECCCCcEE
Q 047931 261 WIMKEYGVKESWTRVFIHQDPNNVWPLCLWKNSTKLLVI-NRKNLLVCDCNNEGSE 315 (339)
Q Consensus 261 W~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~i~~~~-~~~~~~~yd~~t~~~~ 315 (339)
|.+.......... ......-.+.-+++.++|..++.. .++.+.+||.++.+..
T Consensus 278 wd~~~~~~~~~~~--~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~ 331 (435)
T 4e54_B 278 WDLRQVRGKASFL--YSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCP 331 (435)
T ss_dssp EETTTCCSSSCCS--BCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSE
T ss_pred EecccccccceEE--EeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccc
Confidence 9987532111110 000111124445566777666544 4556999999886643
No 57
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=90.19 E-value=8 Score=32.93 Aligned_cols=188 Identities=8% Similarity=-0.078 Sum_probs=99.6
Q ss_pred eCceE-EEccCCCEEEEEcccccce-eecCCCCCCCCCCCCCCeeEEeeeCCceEEEEEeeEeCCCcEEEEEEeCCCceE
Q 047931 101 CNGLV-CTTPKPKIFFVLNPLTRES-KRIPDVPFEPFPRSSDDLYGFGCTAEDCKFIKVSFGLKPNMSVAIFSLRMNSWR 178 (339)
Q Consensus 101 ~~GLl-~~~~~~~~~~V~NP~T~~~-~~LP~~~~~~~~~~~~~~~~~g~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~ 178 (339)
.++.+ ........+.|+|+.|++. ..+|.... ..++.+..+. ++.... . ....+.+++..++.-.
T Consensus 52 ~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~---------p~~i~~~~~g-~lyv~~-~--~~~~v~~iD~~t~~~~ 118 (328)
T 3dsm_A 52 RDGIGWIVVNNSHVIFAIDINTFKEVGRITGFTS---------PRYIHFLSDE-KAYVTQ-I--WDYRIFIINPKTYEIT 118 (328)
T ss_dssp ETTEEEEEEGGGTEEEEEETTTCCEEEEEECCSS---------EEEEEEEETT-EEEEEE-B--SCSEEEEEETTTTEEE
T ss_pred ECCEEEEEEcCCCEEEEEECcccEEEEEcCCCCC---------CcEEEEeCCC-eEEEEE-C--CCCeEEEEECCCCeEE
Confidence 34444 3333457899999999886 45643221 3344442233 443322 1 2457888888876533
Q ss_pred EecccCCc--cCccCCCceEECCeEEEEEecCCCCeEEEEEECCCceee-eecCCCCCCCCceeEEEE-ECCeEEEEEeC
Q 047931 179 RVLASGYT--RPLINVPGTLTNGALHWRLQKHGGDFVLAAFDLVEERFK-EFPLPDASTSFRFFGTGV-LGDCLCLQFFK 254 (339)
Q Consensus 179 ~~~~~~~~--~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~~~~~-~i~lP~~~~~~~~~~l~~-~~G~L~~v~~~ 254 (339)
..-..... ........+..+|.+|...... ...|.++|+++.+.. .++...... .+.. -+|+++++...
T Consensus 119 ~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~--~~~v~viD~~t~~~~~~i~~g~~p~-----~i~~~~dG~l~v~~~~ 191 (328)
T 3dsm_A 119 GYIECPDMDMESGSTEQMVQYGKYVYVNCWSY--QNRILKIDTETDKVVDELTIGIQPT-----SLVMDKYNKMWTITDG 191 (328)
T ss_dssp EEEECTTCCTTTCBCCCEEEETTEEEEEECTT--CCEEEEEETTTTEEEEEEECSSCBC-----CCEECTTSEEEEEBCC
T ss_pred EEEEcCCccccCCCcceEEEECCEEEEEcCCC--CCEEEEEECCCCeEEEEEEcCCCcc-----ceEEcCCCCEEEEECC
Confidence 21111110 0001122234667777665421 248999999987653 445432221 1222 37888877763
Q ss_pred C----------CeEEEEEEcccCCCCCeEEEEEecCCCC--eeEEEEEeCCeEEEEECCcEEEEEECCCCcEE
Q 047931 255 G----------KMKEHWIMKEYGVKESWTRVFIHQDPNN--VWPLCLWKNSTKLLVINRKNLLVCDCNNEGSE 315 (339)
Q Consensus 255 ~----------~~l~iW~l~~~~~~~~W~~~~~i~~~~~--~~~~~~~~~~~i~~~~~~~~~~~yd~~t~~~~ 315 (339)
. ..+.++..+. .+- ..++..+.+ ..-+++.++++.++..+. .++.+|.+++++.
T Consensus 192 ~~~~~~~~~~~~~v~~id~~t----~~v--~~~~~~~~g~~p~~la~~~d~~~lyv~~~-~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 192 GYEGSPYGYEAPSLYRIDAET----FTV--EKQFKFKLGDWPSEVQLNGTRDTLYWINN-DIWRMPVEADRVP 257 (328)
T ss_dssp BCTTCSSCBCCCEEEEEETTT----TEE--EEEEECCTTCCCEEEEECTTSCEEEEESS-SEEEEETTCSSCC
T ss_pred CccCCccccCCceEEEEECCC----CeE--EEEEecCCCCCceeEEEecCCCEEEEEcc-EEEEEECCCCcee
Confidence 2 4454444332 222 233433212 345666666777776665 7999999998864
No 58
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=89.75 E-value=15 Score=35.41 Aligned_cols=183 Identities=8% Similarity=-0.034 Sum_probs=96.7
Q ss_pred eEEEccCCCEEEEEcccccceee-cCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCC-ceEEe
Q 047931 104 LVCTTPKPKIFFVLNPLTRESKR-IPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMN-SWRRV 180 (339)
Q Consensus 104 Ll~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~-~W~~~ 180 (339)
++.....+..+.|+|.-+++... +...... ...+.+ ..+.+-+.+- ....+.+|+..++ .....
T Consensus 69 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~--------v~~~~~s~~~~~l~~~~-----~dg~i~vw~~~~~~~~~~~ 135 (814)
T 3mkq_A 69 WIIVGSDDFRIRVFNYNTGEKVVDFEAHPDY--------IRSIAVHPTKPYVLSGS-----DDLTVKLWNWENNWALEQT 135 (814)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSSC--------EEEEEECSSSSEEEEEE-----TTSEEEEEEGGGTSEEEEE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEEecCCCC--------EEEEEEeCCCCEEEEEc-----CCCEEEEEECCCCceEEEE
Confidence 34444456789999988877543 2221111 445555 3344433222 2457888888765 22221
Q ss_pred -cccCCccCccCCCceEE---CCeEEEEEecCCCCeEEEEEECCCceeee-ecCCCCCCCCceeEEEEE---CCeEEEEE
Q 047931 181 -LASGYTRPLINVPGTLT---NGALHWRLQKHGGDFVLAAFDLVEERFKE-FPLPDASTSFRFFGTGVL---GDCLCLQF 252 (339)
Q Consensus 181 -~~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~il~fD~~~~~~~~-i~lP~~~~~~~~~~l~~~---~G~L~~v~ 252 (339)
...... -..+.+ +|.....+..+ ..|..+|+.+.+... +..+.... ...+... +|.+.++.
T Consensus 136 ~~~~~~~-----v~~~~~~p~~~~~l~~~~~d---g~v~vwd~~~~~~~~~~~~~~~~~---v~~~~~~~~~~~~~l~~~ 204 (814)
T 3mkq_A 136 FEGHEHF-----VMCVAFNPKDPSTFASGCLD---RTVKVWSLGQSTPNFTLTTGQERG---VNYVDYYPLPDKPYMITA 204 (814)
T ss_dssp EECCSSC-----EEEEEEETTEEEEEEEEETT---SEEEEEETTCSSCSEEEECCCTTC---CCEEEECCSTTCCEEEEE
T ss_pred EcCCCCc-----EEEEEEEcCCCCEEEEEeCC---CeEEEEECCCCcceeEEecCCCCC---EEEEEEEECCCCCEEEEE
Confidence 111110 112222 34444444433 478889987654322 22222111 1122222 67777777
Q ss_pred eCCCeEEEEEEcccCCCCCeEEEEEecCC-CCeeEEEEEeCCeEEEEEC-CcEEEEEECCCCcEEE
Q 047931 253 FKGKMKEHWIMKEYGVKESWTRVFIHQDP-NNVWPLCLWKNSTKLLVIN-RKNLLVCDCNNEGSED 316 (339)
Q Consensus 253 ~~~~~l~iW~l~~~~~~~~W~~~~~i~~~-~~~~~~~~~~~~~i~~~~~-~~~~~~yd~~t~~~~~ 316 (339)
..+..+.+|.++. .....++... -.+.-+++.++|.+++... ++.+..||..+++...
T Consensus 205 ~~dg~i~~~d~~~------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~ 264 (814)
T 3mkq_A 205 SDDLTIKIWDYQT------KSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEK 264 (814)
T ss_dssp CTTSEEEEEETTT------TEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEE
T ss_pred eCCCEEEEEECCC------CcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 7888999998764 2233444332 1256677777887666554 5679999999876443
No 59
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=89.75 E-value=8.6 Score=32.64 Aligned_cols=190 Identities=3% Similarity=-0.088 Sum_probs=93.2
Q ss_pred EEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEEecccCCccCccC
Q 047931 113 IFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRVLASGYTRPLIN 191 (339)
Q Consensus 113 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~~~~~~ 191 (339)
.++.+|+.|++...+...... . ...++.+ ..+. ++... ...+...+.+|+..++.++.+...........
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~----~--~p~~~a~spdg~--l~~~~-~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~ 89 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAAT----Q--NPTYLALSAKDC--LYSVD-KEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPA 89 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEEC----S--CCCCEEECTTCE--EEEEE-EETTEEEEEEEEEETTEEEEEEEEEEESCCCS
T ss_pred EEEEEcCCCCeEEEeeeeecc----C--CcceEEEccCCe--EEEEE-ecCCCceEEEEEecCCcEEEeeeeecCCCCCE
Confidence 355567877776554221111 0 0122444 2232 44443 22234578889998888877644221110000
Q ss_pred CCceEECCe-EEEEEecCCCCeEEEEEECC-Cceeeee---cCCCCC----CCC-ceeEEEEE-CCeEEEEEeCCCeEEE
Q 047931 192 VPGTLTNGA-LHWRLQKHGGDFVLAAFDLV-EERFKEF---PLPDAS----TSF-RFFGTGVL-GDCLCLQFFKGKMKEH 260 (339)
Q Consensus 192 ~~~v~~~G~-lyw~~~~~~~~~~il~fD~~-~~~~~~i---~lP~~~----~~~-~~~~l~~~-~G~L~~v~~~~~~l~i 260 (339)
.-.+.-+|. +|...... ..+..+|+. +.+...+ ...... ... ....++.. +|+|++.......+.+
T Consensus 90 ~~a~spdg~~l~~~~~~~---~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~ 166 (347)
T 3hfq_A 90 YVAVDEARQLVYSANYHK---GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYV 166 (347)
T ss_dssp EEEEETTTTEEEEEETTT---TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred EEEECCCCCEEEEEeCCC---CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEE
Confidence 112334576 44433232 367777774 3333322 221110 000 12234444 8886655557788999
Q ss_pred EEEcccCCCCCeEEEEEecCCC--CeeEEEEEeCCeEEEEE-C-CcEEEEEECC--CCcEEEe
Q 047931 261 WIMKEYGVKESWTRVFIHQDPN--NVWPLCLWKNSTKLLVI-N-RKNLLVCDCN--NEGSEDV 317 (339)
Q Consensus 261 W~l~~~~~~~~W~~~~~i~~~~--~~~~~~~~~~~~i~~~~-~-~~~~~~yd~~--t~~~~~v 317 (339)
|.++.. ++......+.... +..-+++.++|+.++.. . +..+.+|+++ +++++.+
T Consensus 167 ~~~~~~---g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~ 226 (347)
T 3hfq_A 167 YNVSDA---GQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQL 226 (347)
T ss_dssp EEECTT---SCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEE
T ss_pred EEECCC---CcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEe
Confidence 999842 3455444443322 24446788888755543 2 3456666655 5776554
No 60
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=89.49 E-value=7.5 Score=31.58 Aligned_cols=187 Identities=10% Similarity=-0.000 Sum_probs=92.7
Q ss_pred CCEEEEEcccc-cceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEEecccCCccC
Q 047931 111 PKIFFVLNPLT-RESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRVLASGYTRP 188 (339)
Q Consensus 111 ~~~~~V~NP~T-~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~~~ 188 (339)
...++++|..+ ++...+...... . ....+.+ ..+.+-++... .......+.+++..++.-+.+.......
T Consensus 61 ~~~i~~~d~~~~~~~~~~~~~~~~----~--~~~~~~~spdg~~l~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~- 132 (297)
T 2ojh_A 61 EGLLYRLSLAGDPSPEKVDTGFAT----I--CNNDHGISPDGALYAISDK-VEFGKSAIYLLPSTGGTPRLMTKNLPSY- 132 (297)
T ss_dssp TTEEEEEESSSCCSCEECCCTTCC----C--BCSCCEECTTSSEEEEEEC-TTTSSCEEEEEETTCCCCEECCSSSSEE-
T ss_pred CCeEEEEeCCCCCCceEecccccc----c--cccceEECCCCCEEEEEEe-CCCCcceEEEEECCCCceEEeecCCCcc-
Confidence 56899999999 877666543311 0 0122333 23333322221 1112456666776666555443221100
Q ss_pred ccCCCceEECCe-EEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCeEEEEEe-CCCeEEEEEEcc
Q 047931 189 LINVPGTLTNGA-LHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDCLCLQFF-KGKMKEHWIMKE 265 (339)
Q Consensus 189 ~~~~~~v~~~G~-lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~L~~v~~-~~~~l~iW~l~~ 265 (339)
.....-+|. +++..... ....|..+|..+.+...+..... ....+... +|+..++.. ....+.||.++.
T Consensus 133 ---~~~~spdg~~l~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~ 204 (297)
T 2ojh_A 133 ---WHGWSPDGKSFTYCGIRD-QVFDIYSMDIDSGVETRLTHGEG----RNDGPDYSPDGRWIYFNSSRTGQMQIWRVRV 204 (297)
T ss_dssp ---EEEECTTSSEEEEEEEET-TEEEEEEEETTTCCEEECCCSSS----CEEEEEECTTSSEEEEEECTTSSCEEEEEET
T ss_pred ---ceEECCCCCEEEEEECCC-CceEEEEEECCCCcceEcccCCC----ccccceECCCCCEEEEEecCCCCccEEEECC
Confidence 001112454 33333332 23467777777766554432111 11223333 676544444 567889999974
Q ss_pred cCCCCCeEEEEEecCC-CCeeEEEEEeCCeEEE-EECC-----------cEEEEEECCCCcEEEeE
Q 047931 266 YGVKESWTRVFIHQDP-NNVWPLCLWKNSTKLL-VINR-----------KNLLVCDCNNEGSEDVA 318 (339)
Q Consensus 266 ~~~~~~W~~~~~i~~~-~~~~~~~~~~~~~i~~-~~~~-----------~~~~~yd~~t~~~~~v~ 318 (339)
.+ ... ..+... .....+++.++|+.++ ...+ ..++.||+++++.+.+.
T Consensus 205 ~~--~~~---~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 205 DG--SSV---ERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLF 265 (297)
T ss_dssp TS--SCE---EECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEE
T ss_pred CC--CCc---EEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeee
Confidence 22 222 223221 1134456667776444 3322 35999999999877664
No 61
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=89.39 E-value=10 Score=33.02 Aligned_cols=200 Identities=6% Similarity=-0.045 Sum_probs=100.5
Q ss_pred eEEEccCCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEEecc
Q 047931 104 LVCTTPKPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRVLA 182 (339)
Q Consensus 104 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~ 182 (339)
++.....+..+.|+|..+++...-...+...+..-......+.+ ..+...++... ....+.+|+.+++.....-.
T Consensus 96 ~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~----~dg~i~iwd~~~~~~~~~~~ 171 (402)
T 2aq5_A 96 VIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAG----CDNVILVWDVGTGAAVLTLG 171 (402)
T ss_dssp EEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEE----TTSCEEEEETTTTEEEEEEC
T ss_pred EEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEc----CCCEEEEEECCCCCccEEEe
Confidence 44444456789999988764321100000000000011444555 23223333322 24568889888775432210
Q ss_pred cCCccCccCCCceEE--CCeEEEEEecCCCCeEEEEEECCCceeee-e-cCCCCCCCCceeEEEE-ECCeEEEEE---eC
Q 047931 183 SGYTRPLINVPGTLT--NGALHWRLQKHGGDFVLAAFDLVEERFKE-F-PLPDASTSFRFFGTGV-LGDCLCLQF---FK 254 (339)
Q Consensus 183 ~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~~~~~~-i-~lP~~~~~~~~~~l~~-~~G~L~~v~---~~ 254 (339)
..... ..-..+.+ +|.....+..+ ..|..+|+.+.+... + ...... ....+.. -+|++.++. ..
T Consensus 172 ~~~~~--~~v~~~~~~~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~g~~~~~ 243 (402)
T 2aq5_A 172 PDVHP--DTIYSVDWSRDGALICTSCRD---KRVRVIEPRKGTVVAEKDRPHEGT---RPVHAVFVSEGKILTTGFSRMS 243 (402)
T ss_dssp TTTCC--SCEEEEEECTTSSCEEEEETT---SEEEEEETTTTEEEEEEECSSCSS---SCCEEEECSTTEEEEEEECTTC
T ss_pred cCCCC--CceEEEEECCCCCEEEEEecC---CcEEEEeCCCCceeeeeccCCCCC---cceEEEEcCCCcEEEEeccCCC
Confidence 01000 01112222 45554444443 589999998866433 3 222211 1122332 378877776 36
Q ss_pred CCeEEEEEEcccCCCCCeEEEEEecCCCCeeEEEEEeCCeEEEE-E-CCcEEEEEECCCCc--EEEeE
Q 047931 255 GKMKEHWIMKEYGVKESWTRVFIHQDPNNVWPLCLWKNSTKLLV-I-NRKNLLVCDCNNEG--SEDVA 318 (339)
Q Consensus 255 ~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~i~~~-~-~~~~~~~yd~~t~~--~~~v~ 318 (339)
+..+.+|.++.... =.....+...-+..-+++.+++..++. . .++.+.+||+++++ ++.+.
T Consensus 244 d~~i~iwd~~~~~~---~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~ 308 (402)
T 2aq5_A 244 ERQVALWDTKHLEE---PLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLS 308 (402)
T ss_dssp CEEEEEEETTBCSS---CSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEE
T ss_pred CceEEEEcCccccC---CceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeec
Confidence 78899999886321 111223332223556677778876654 4 35679999999988 55553
No 62
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=89.00 E-value=8.4 Score=33.80 Aligned_cols=138 Identities=9% Similarity=-0.066 Sum_probs=74.6
Q ss_pred EEEEEEeCCCceEEecccCCccCccCCCceEE--CCeEEEEEecCCCCeEEEEEECCCceeeee-cCCCCCCCCcee-EE
Q 047931 166 SVAIFSLRMNSWRRVLASGYTRPLINVPGTLT--NGALHWRLQKHGGDFVLAAFDLVEERFKEF-PLPDASTSFRFF-GT 241 (339)
Q Consensus 166 ~~~vyss~~~~W~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~-~l 241 (339)
.+.+++..++.++.+..++..... . ++.+ +|.++.....+ ..|..+|+.+.+.... +.+......... .+
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~~~~--~-~~~~s~~~~~~~~~~~~---~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~ 175 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTGFQP--K-SVRFIDNTRLAIPLLED---EGMDVLDINSGQTVRLSPPEKYKKKLGFVETI 175 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECSSCB--C-CCEESSSSEEEEEBTTS---SSEEEEETTTCCEEEECCCHHHHTTCCEEEEE
T ss_pred EEEEECCCCCcceEEEEEcCCCCc--e-EEEEeCCCeEEEEeCCC---CeEEEEECCCCeEeeecCcccccccCCceeEE
Confidence 455555555666655433322111 1 1222 45555544332 3588899998766543 221111111122 22
Q ss_pred EEE-CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecC-CCCeeEEEEEeCCeEEE-EE-CCcEEEEEECCCCcEE
Q 047931 242 GVL-GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQD-PNNVWPLCLWKNSTKLL-VI-NRKNLLVCDCNNEGSE 315 (339)
Q Consensus 242 ~~~-~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~-~~~~~~~~~~~~~~i~~-~~-~~~~~~~yd~~t~~~~ 315 (339)
... +|++++....+..+.+|.++. .+ ...++.. .....-+++.++++.++ .. .+..+..||+++++..
T Consensus 176 ~~~~~~~~~~s~~~d~~v~~~d~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~ 247 (433)
T 3bws_A 176 SIPEHNELWVSQMQANAVHVFDLKT----LA--YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEI 247 (433)
T ss_dssp EEGGGTEEEEEEGGGTEEEEEETTT----CC--EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEcCCCEEEEEECCCCEEEEEECCC----ce--EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEE
Confidence 322 788887777888999998874 11 2233332 22245667777776554 44 3567999999988754
No 63
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=88.47 E-value=10 Score=31.77 Aligned_cols=150 Identities=5% Similarity=-0.039 Sum_probs=79.6
Q ss_pred CcEEEEEEeCC-CceEEec--ccCCccCccCCCceEE--CCe-EEEEEecCCCCeEEEEEECC--Cceee---ee-cCCC
Q 047931 164 NMSVAIFSLRM-NSWRRVL--ASGYTRPLINVPGTLT--NGA-LHWRLQKHGGDFVLAAFDLV--EERFK---EF-PLPD 231 (339)
Q Consensus 164 ~~~~~vyss~~-~~W~~~~--~~~~~~~~~~~~~v~~--~G~-lyw~~~~~~~~~~il~fD~~--~~~~~---~i-~lP~ 231 (339)
...+.+|+..+ +...... ....... .....+.+ +|. +|...... ..+..+|+. +.++. .+ .+|.
T Consensus 150 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~pdg~~l~~~~~~~---~~i~~~~~~~~~g~~~~~~~~~~~~~ 225 (343)
T 1ri6_A 150 QDRICLFTVSDDGHLVAQDPAEVTTVEG-AGPRHMVFHPNEQYAYCVNELN---SSVDVWELKDPHGNIECVQTLDMMPE 225 (343)
T ss_dssp GTEEEEEEECTTSCEEEEEEEEEECSTT-CCEEEEEECTTSSEEEEEETTT---TEEEEEESSCTTSCCEEEEEEECSCT
T ss_pred CCEEEEEEecCCCceeeecccccccCCC-CCcceEEECCCCCEEEEEeCCC---CEEEEEEecCCCCcEEEEeeccccCc
Confidence 34688888887 6665432 1111100 00112222 465 44443232 467888874 34332 22 2444
Q ss_pred CCCCC-ceeEEEEE-CCe-EEEEEeCCCeEEEEEEcccCCCCCeEEEEEecCCCCeeEEEEEeCCeEEEEEC--CcEEEE
Q 047931 232 ASTSF-RFFGTGVL-GDC-LCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQDPNNVWPLCLWKNSTKLLVIN--RKNLLV 306 (339)
Q Consensus 232 ~~~~~-~~~~l~~~-~G~-L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~i~~~~~--~~~~~~ 306 (339)
..... ....+... +|+ |++.......+.+|.++.. +.++..+..+...-...-+++.++|+.++... +..+.+
T Consensus 226 ~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~--~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v 303 (343)
T 1ri6_A 226 NFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSED--GSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISV 303 (343)
T ss_dssp TCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT--SCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEE
T ss_pred cccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCC--CCceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEE
Confidence 32211 12233333 565 4444447789999999853 24577766665422244567777887555554 345666
Q ss_pred E--ECCCCcEEEeEE
Q 047931 307 C--DCNNEGSEDVAV 319 (339)
Q Consensus 307 y--d~~t~~~~~v~~ 319 (339)
| |.++++++.+.-
T Consensus 304 ~~~d~~~g~~~~~~~ 318 (343)
T 1ri6_A 304 YEIVGEQGLLHEKGR 318 (343)
T ss_dssp EEEETTTTEEEEEEE
T ss_pred EEEcCCCceeeEccc
Confidence 6 788888887743
No 64
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=88.06 E-value=11 Score=31.91 Aligned_cols=67 Identities=3% Similarity=-0.205 Sum_probs=47.3
Q ss_pred CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecC-CCCeeEEEEEeCCeEEEEECCcEEEEEECCC--CcEEEe
Q 047931 245 GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQD-PNNVWPLCLWKNSTKLLVINRKNLLVCDCNN--EGSEDV 317 (339)
Q Consensus 245 ~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~-~~~~~~~~~~~~~~i~~~~~~~~~~~yd~~t--~~~~~v 317 (339)
+|.+.++...+..+.+|.++.. + .+.++.. ...+.-+++.+++.++....++.+..||+++ ++|+.+
T Consensus 213 ~~~~l~~~~~d~~i~i~d~~~~----~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~~~~~~ 282 (372)
T 1k8k_C 213 NGSRVAWVSHDSTVCLADADKK----M--AVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFG 282 (372)
T ss_dssp SSSEEEEEETTTEEEEEEGGGT----T--EEEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEEC
T ss_pred CCCEEEEEeCCCEEEEEECCCC----c--eeEEEccCCCCeEEEEEecCCCEEEEEeCCeEEEEEccCcCceEEEe
Confidence 6776666668889999999852 1 2334433 2225667778888888877777899999988 777654
No 65
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=87.71 E-value=12 Score=31.60 Aligned_cols=191 Identities=13% Similarity=0.003 Sum_probs=95.0
Q ss_pred eEEEccCCCEEEEEcccccc--eeecCCCCCCCCCCCCCCeeEEe----e-eCCceEEEEEeeEeCCCcEEEEEEeCCCc
Q 047931 104 LVCTTPKPKIFFVLNPLTRE--SKRIPDVPFEPFPRSSDDLYGFG----C-TAEDCKFIKVSFGLKPNMSVAIFSLRMNS 176 (339)
Q Consensus 104 Ll~~~~~~~~~~V~NP~T~~--~~~LP~~~~~~~~~~~~~~~~~g----~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~ 176 (339)
+++....+..+.++|..+++ ...+...... .......+. + ..+.+-+..- ..-.+.+|+.+++.
T Consensus 131 ~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~l~~~~-----~d~~i~i~d~~~~~ 201 (357)
T 3i2n_A 131 EIVTGSRDGTVKVWDPRQKDDPVANMEPVQGE----NKRDCWTVAFGNAYNQEERVVCAGY-----DNGDIKLFDLRNMA 201 (357)
T ss_dssp EEEEEETTSCEEEECTTSCSSCSEEECCCTTS----CCCCEEEEEEECCCC-CCCEEEEEE-----TTSEEEEEETTTTE
T ss_pred EEEEEeCCCeEEEEeCCCCCCcceeccccCCC----CCCceEEEEEEeccCCCCCEEEEEc-----cCCeEEEEECccCc
Confidence 33333456788899988765 2333222211 111122333 2 2333333222 24578888888765
Q ss_pred eEEecccCCccCccCCCceEE-----CCeEEEEEecCCCCeEEEEEECCCceeee-ec---CCCCCCCCceeEEEEE-CC
Q 047931 177 WRRVLASGYTRPLINVPGTLT-----NGALHWRLQKHGGDFVLAAFDLVEERFKE-FP---LPDASTSFRFFGTGVL-GD 246 (339)
Q Consensus 177 W~~~~~~~~~~~~~~~~~v~~-----~G~lyw~~~~~~~~~~il~fD~~~~~~~~-i~---lP~~~~~~~~~~l~~~-~G 246 (339)
=......... ...+.+ +|.....+..+ ..|..+|+.+.+... +. ++... .....+... +|
T Consensus 202 ~~~~~~~~~~-----v~~~~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~ 271 (357)
T 3i2n_A 202 LRWETNIKNG-----VCSLEFDRKDISMNKLVATSLE---GKFHVFDMRTQHPTKGFASVSEKAHK--STVWQVRHLPQN 271 (357)
T ss_dssp EEEEEECSSC-----EEEEEESCSSSSCCEEEEEEST---TEEEEEEEEEEETTTEEEEEEEECCS--SCEEEEEEETTE
T ss_pred eeeecCCCCc-----eEEEEcCCCCCCCCEEEEECCC---CeEEEEeCcCCCcccceeeeccCCCc--CCEEEEEECCCC
Confidence 3322111111 111222 44544444433 477788877654211 11 11111 112233333 56
Q ss_pred e-EEEEEeCCCeEEEEEEcccCCC-------------CCeEEEEEecCC-CCeeEEEEEeCCeEEE--EECCcEEEEEEC
Q 047931 247 C-LCLQFFKGKMKEHWIMKEYGVK-------------ESWTRVFIHQDP-NNVWPLCLWKNSTKLL--VINRKNLLVCDC 309 (339)
Q Consensus 247 ~-L~~v~~~~~~l~iW~l~~~~~~-------------~~W~~~~~i~~~-~~~~~~~~~~~~~i~~--~~~~~~~~~yd~ 309 (339)
+ +.+....+..+.||.++..... .++....++... -.+.-+++.++|..++ ...++.+.+||+
T Consensus 272 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~ 351 (357)
T 3i2n_A 272 RELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIV 351 (357)
T ss_dssp EEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred CcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEEC
Confidence 6 5555558889999999853211 245566666442 2256677777886554 344667999998
Q ss_pred CCCc
Q 047931 310 NNEG 313 (339)
Q Consensus 310 ~t~~ 313 (339)
++.+
T Consensus 352 ~~~~ 355 (357)
T 3i2n_A 352 TKLN 355 (357)
T ss_dssp CC--
T ss_pred CCcc
Confidence 8653
No 66
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=87.11 E-value=12 Score=31.27 Aligned_cols=190 Identities=6% Similarity=-0.130 Sum_probs=97.4
Q ss_pred eEEEccCCCEEEEEcc-cccceeecCC--CCCCCCCCCCCCeeEEeeeCCceEEEEEeeEeCCCcEEEEEEeCCC--c--
Q 047931 104 LVCTTPKPKIFFVLNP-LTRESKRIPD--VPFEPFPRSSDDLYGFGCTAEDCKFIKVSFGLKPNMSVAIFSLRMN--S-- 176 (339)
Q Consensus 104 Ll~~~~~~~~~~V~NP-~T~~~~~LP~--~~~~~~~~~~~~~~~~g~~~~~ykvv~~~~~~~~~~~~~vyss~~~--~-- 176 (339)
+++....+..+.++|. .+++...+.. .... ...+.+..+.+-+.+-. ...+.+|+.++. .
T Consensus 71 ~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~--------v~~l~~~~~~~l~s~~~-----d~~i~iwd~~~~~~~~~ 137 (342)
T 1yfq_A 71 QIYVGTVQGEILKVDLIGSPSFQALTNNEANLG--------ICRICKYGDDKLIAASW-----DGLIEVIDPRNYGDGVI 137 (342)
T ss_dssp EEEEEETTSCEEEECSSSSSSEEECBSCCCCSC--------EEEEEEETTTEEEEEET-----TSEEEEECHHHHTTBCE
T ss_pred EEEEEcCCCeEEEEEeccCCceEeccccCCCCc--------eEEEEeCCCCEEEEEcC-----CCeEEEEcccccccccc
Confidence 3444445678999999 8888766654 2222 44455522333332221 446777776530 0
Q ss_pred ---eEEecccCCccCccCCCceEECCeEEEEEecCCCCeEEEEEECCC-ce--eeeecCCCCCCCCceeEEEEE--CCeE
Q 047931 177 ---WRRVLASGYTRPLINVPGTLTNGALHWRLQKHGGDFVLAAFDLVE-ER--FKEFPLPDASTSFRFFGTGVL--GDCL 248 (339)
Q Consensus 177 ---W~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~-~~--~~~i~lP~~~~~~~~~~l~~~--~G~L 248 (339)
.+.+..+... ....++.+++.-...+... ..|..+|+.+ .. ......+... ....+... +|.+
T Consensus 138 ~~~~~~~~~~~~~---~~v~~~~~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~~~---~i~~i~~~~~~~~~ 208 (342)
T 1yfq_A 138 AVKNLNSNNTKVK---NKIFTMDTNSSRLIVGMNN---SQVQWFRLPLCEDDNGTIEESGLKY---QIRDVALLPKEQEG 208 (342)
T ss_dssp EEEESCSSSSSSC---CCEEEEEECSSEEEEEEST---TEEEEEESSCCTTCCCEEEECSCSS---CEEEEEECSGGGCE
T ss_pred cccCCeeeEEeeC---CceEEEEecCCcEEEEeCC---CeEEEEECCccccccceeeecCCCC---ceeEEEECCCCCCE
Confidence 1111111111 1111233333332222222 4788899887 32 3333332222 12233443 5777
Q ss_pred EEEEeCCCeEEEEEEcccCCCCCeEEEEEecC--C--------CCeeEEEEEeCCeEEEE-ECCcEEEEEECCCCcEE
Q 047931 249 CLQFFKGKMKEHWIMKEYGVKESWTRVFIHQD--P--------NNVWPLCLWKNSTKLLV-INRKNLLVCDCNNEGSE 315 (339)
Q Consensus 249 ~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~--~--------~~~~~~~~~~~~~i~~~-~~~~~~~~yd~~t~~~~ 315 (339)
.++...+..+.||.++..+..........+.. . -.+.-+++.+++..++. ..++.+.+||+++++..
T Consensus 209 l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~ 286 (342)
T 1yfq_A 209 YACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKI 286 (342)
T ss_dssp EEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEE
T ss_pred EEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHh
Confidence 77777888999999986421111111222221 1 02556667777765554 44567999999988753
No 67
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=86.51 E-value=15 Score=31.69 Aligned_cols=188 Identities=5% Similarity=-0.108 Sum_probs=93.7
Q ss_pred Cc-eEEEccCCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEE
Q 047931 102 NG-LVCTTPKPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRR 179 (339)
Q Consensus 102 ~G-Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~ 179 (339)
+| ++.....+..+.++|.-.+....+...... ...+.+ ..+.+-+.+-. ...+.+|+..++.-..
T Consensus 119 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~--------v~~~~~~~~~~~l~~~~~-----d~~i~iwd~~~~~~~~ 185 (425)
T 1r5m_A 119 DGNSIVTGVENGELRLWNKTGALLNVLNFHRAP--------IVSVKWNKDGTHIISMDV-----ENVTILWNVISGTVMQ 185 (425)
T ss_dssp TSSEEEEEETTSCEEEEETTSCEEEEECCCCSC--------EEEEEECTTSSEEEEEET-----TCCEEEEETTTTEEEE
T ss_pred CCCEEEEEeCCCeEEEEeCCCCeeeeccCCCcc--------EEEEEECCCCCEEEEEec-----CCeEEEEECCCCcEEE
Confidence 44 344444566788898433333444322222 455555 33444333322 4467788887764432
Q ss_pred ecccCCcc-------------CccCCCceEECCeEEEEEecCCCCeEEEEEECCCceeee-ecCCCCCCCCceeEEEEE-
Q 047931 180 VLASGYTR-------------PLINVPGTLTNGALHWRLQKHGGDFVLAAFDLVEERFKE-FPLPDASTSFRFFGTGVL- 244 (339)
Q Consensus 180 ~~~~~~~~-------------~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~~~~~~-i~lP~~~~~~~~~~l~~~- 244 (339)
.-...... .....-...-+|.+...... ..|..+|+.+.+... +..... ....+...
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~i~~~d~~~~~~~~~~~~~~~----~i~~~~~~~ 257 (425)
T 1r5m_A 186 HFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPK----GAIFVYQITEKTPTGKLIGHHG----PISVLEFND 257 (425)
T ss_dssp EECCC---------------CCCBSCCEEEETTEEEEECGG----GCEEEEETTCSSCSEEECCCSS----CEEEEEEET
T ss_pred EeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCC----CeEEEEEcCCCceeeeeccCCC----ceEEEEECC
Confidence 21111000 00011112233443332222 478899988764332 221111 12233333
Q ss_pred CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecC-CCCeeEEEEEeCCeEEEEECCcEEEEEECCCCcEEE
Q 047931 245 GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQD-PNNVWPLCLWKNSTKLLVINRKNLLVCDCNNEGSED 316 (339)
Q Consensus 245 ~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~-~~~~~~~~~~~~~~i~~~~~~~~~~~yd~~t~~~~~ 316 (339)
+|++.++...+..+.+|.++... . ...+.. .-.+.-+++.+++.++....++.+..||+++++...
T Consensus 258 ~~~~l~~~~~d~~i~i~d~~~~~--~----~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 324 (425)
T 1r5m_A 258 TNKLLLSASDDGTLRIWHGGNGN--S----QNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLA 324 (425)
T ss_dssp TTTEEEEEETTSCEEEECSSSBS--C----SEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEE
T ss_pred CCCEEEEEcCCCEEEEEECCCCc--c----ceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeE
Confidence 67766666678889999887521 1 122322 112556667777744444556679999998877543
No 68
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=86.34 E-value=14 Score=31.28 Aligned_cols=179 Identities=9% Similarity=0.060 Sum_probs=92.5
Q ss_pred cCCCEEEEEccccccee-ecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCc--eEEecccC
Q 047931 109 PKPKIFFVLNPLTRESK-RIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNS--WRRVLASG 184 (339)
Q Consensus 109 ~~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~--W~~~~~~~ 184 (339)
..+..+.|||..+++.. .++..... ...+.+ ..+.+-+.+-. ...+.+|+..++. .+....+.
T Consensus 74 s~Dg~v~iWd~~~~~~~~~~~~~~~~--------v~~~~~s~~~~~l~s~~~-----d~~v~iw~~~~~~~~~~~~~~~~ 140 (340)
T 1got_B 74 SQDGKLIIWDSYTTNKVHAIPLRSSW--------VMTCAYAPSGNYVACGGL-----DNICSIYNLKTREGNVRVSRELA 140 (340)
T ss_dssp ETTTEEEEEETTTCCEEEEEECSSSC--------EEEEEECTTSSEEEEEET-----TCEEEEEETTTCSBSCEEEEEEE
T ss_pred eCCCcEEEEECCCCCcceEeecCCcc--------EEEEEECCCCCEEEEEeC-----CCeEEEEECccCCCcceeEEEec
Confidence 35678889998877643 22222211 444555 34444333322 4567888876542 22221111
Q ss_pred CccCccCCCceEECCeEEEEEecCCCCeEEEEEECCCceeee-ecCCCCCCCCceeEEEEE-CCeEEEEEeCCCeEEEEE
Q 047931 185 YTRPLINVPGTLTNGALHWRLQKHGGDFVLAAFDLVEERFKE-FPLPDASTSFRFFGTGVL-GDCLCLQFFKGKMKEHWI 262 (339)
Q Consensus 185 ~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~~~~~~-i~lP~~~~~~~~~~l~~~-~G~L~~v~~~~~~l~iW~ 262 (339)
........-...-+|.+.--..+ ..|..+|+.+.+... +..... .-..+... +|.+.+....+..+.+|.
T Consensus 141 ~h~~~v~~~~~~~~~~l~s~s~d----~~i~~wd~~~~~~~~~~~~h~~----~v~~~~~~~~~~~l~sg~~d~~v~~wd 212 (340)
T 1got_B 141 GHTGYLSCCRFLDDNQIVTSSGD----TTCALWDIETGQQTTTFTGHTG----DVMSLSLAPDTRLFVSGACDASAKLWD 212 (340)
T ss_dssp CCSSCEEEEEEEETTEEEEEETT----SCEEEEETTTTEEEEEECCCSS----CEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CCCccEEEEEECCCCcEEEEECC----CcEEEEECCCCcEEEEEcCCCC----ceEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 11000000001123443222222 478889998876433 221111 12233333 777777777888999998
Q ss_pred EcccCCCCCeEEEEEecC-CCCeeEEEEEeCCeEEEEE-CCcEEEEEECCCCcE
Q 047931 263 MKEYGVKESWTRVFIHQD-PNNVWPLCLWKNSTKLLVI-NRKNLLVCDCNNEGS 314 (339)
Q Consensus 263 l~~~~~~~~W~~~~~i~~-~~~~~~~~~~~~~~i~~~~-~~~~~~~yd~~t~~~ 314 (339)
++.. ....++.. .-.+.-+++.+++..++.. .++.+..||+++++.
T Consensus 213 ~~~~------~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~ 260 (340)
T 1got_B 213 VREG------MCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQE 260 (340)
T ss_dssp TTTC------SEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred CCCC------eeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcE
Confidence 8751 22334432 2225667777888766654 455699999988763
No 69
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=85.82 E-value=15 Score=30.99 Aligned_cols=177 Identities=8% Similarity=-0.010 Sum_probs=91.7
Q ss_pred CCCEEEEEcccccceee-cCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEEe-cccCCc
Q 047931 110 KPKIFFVLNPLTRESKR-IPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRV-LASGYT 186 (339)
Q Consensus 110 ~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~-~~~~~~ 186 (339)
.+..+.++|..+++... +...+.. ...+.+ ..+.+-+..- ....+.+|+.+++.-... ......
T Consensus 100 ~D~~i~lWd~~~~~~~~~~~~~~~~--------~~~~~~spdg~~l~~g~-----~dg~v~i~~~~~~~~~~~~~~~~~~ 166 (321)
T 3ow8_A 100 LDAHIRLWDLENGKQIKSIDAGPVD--------AWTLAFSPDSQYLATGT-----HVGKVNIFGVESGKKEYSLDTRGKF 166 (321)
T ss_dssp TTSEEEEEETTTTEEEEEEECCTTC--------CCCEEECTTSSEEEEEC-----TTSEEEEEETTTCSEEEEEECSSSC
T ss_pred CCCcEEEEECCCCCEEEEEeCCCcc--------EEEEEECCCCCEEEEEc-----CCCcEEEEEcCCCceeEEecCCCce
Confidence 46788899988876432 2222211 223444 2333332221 245677887776543221 110000
Q ss_pred cCccCCCceEECCeEEEEEecCCCCeEEEEEECCCceee-eecCCCCCCCCceeEEEEE-CCeEEEEEeCCCeEEEEEEc
Q 047931 187 RPLINVPGTLTNGALHWRLQKHGGDFVLAAFDLVEERFK-EFPLPDASTSFRFFGTGVL-GDCLCLQFFKGKMKEHWIMK 264 (339)
Q Consensus 187 ~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~~~~~-~i~lP~~~~~~~~~~l~~~-~G~L~~v~~~~~~l~iW~l~ 264 (339)
. ..-...-+|.....+..+ ..|..+|+++.+.. .+..... ....+... +|++.+....+..+.||.++
T Consensus 167 v---~~~~~spdg~~lasg~~d---g~i~iwd~~~~~~~~~~~~h~~----~v~~l~~spd~~~l~s~s~dg~i~iwd~~ 236 (321)
T 3ow8_A 167 I---LSIAYSPDGKYLASGAID---GIINIFDIATGKLLHTLEGHAM----PIRSLTFSPDSQLLVTASDDGYIKIYDVQ 236 (321)
T ss_dssp E---EEEEECTTSSEEEEEETT---SCEEEEETTTTEEEEEECCCSS----CCCEEEECTTSCEEEEECTTSCEEEEETT
T ss_pred E---EEEEECCCCCEEEEEcCC---CeEEEEECCCCcEEEEEcccCC----ceeEEEEcCCCCEEEEEcCCCeEEEEECC
Confidence 0 000011234444433333 46888999877643 3332111 11123333 77777666688899999887
Q ss_pred ccCCCCCeEEEEEecCC-CCeeEEEEEeCCeEEEEE-CCcEEEEEECCCCcEE
Q 047931 265 EYGVKESWTRVFIHQDP-NNVWPLCLWKNSTKLLVI-NRKNLLVCDCNNEGSE 315 (339)
Q Consensus 265 ~~~~~~~W~~~~~i~~~-~~~~~~~~~~~~~i~~~~-~~~~~~~yd~~t~~~~ 315 (339)
.. ....++... -.+.-+++.++|..++.. .++.+.+||+++++..
T Consensus 237 ~~------~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~ 283 (321)
T 3ow8_A 237 HA------NLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCV 283 (321)
T ss_dssp TC------CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred Cc------ceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEE
Confidence 52 123344332 125566777787666544 4567999999988744
No 70
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=85.80 E-value=18 Score=31.90 Aligned_cols=179 Identities=7% Similarity=-0.011 Sum_probs=95.6
Q ss_pred CEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEEecccCCccCcc
Q 047931 112 KIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRVLASGYTRPLI 190 (339)
Q Consensus 112 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~~~~~ 190 (339)
..++++|..|++...+...+.. ...+.+ ..+.+-++... ......+.+++..++..+.+......
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~~--------~~~~~~spdg~~la~~~~--~~g~~~i~~~d~~~~~~~~l~~~~~~---- 268 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPRH--------NGAPAFSPDGSKLAFALS--KTGSLNLYVMDLASGQIRQVTDGRSN---- 268 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSSC--------EEEEEECTTSSEEEEEEC--TTSSCEEEEEETTTCCEEECCCCSSC----
T ss_pred cEEEEEECCCCcEEEeecCCCc--------ccCEEEcCCCCEEEEEEe--cCCCceEEEEECCCCCEEeCcCCCCc----
Confidence 4899999999987766543322 344555 33333332321 22355788889888876655332211
Q ss_pred CCCceE--ECCe-EEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCeEEEEEe-C--CCeEEEEEE
Q 047931 191 NVPGTL--TNGA-LHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDCLCLQFF-K--GKMKEHWIM 263 (339)
Q Consensus 191 ~~~~v~--~~G~-lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~L~~v~~-~--~~~l~iW~l 263 (339)
...+. -+|. ++...... ....|..+|+.+.+...+..... ....+... +|+..++.. . ...+.+|.+
T Consensus 269 -~~~~~~spdg~~l~~~s~~~-g~~~i~~~d~~~~~~~~l~~~~~----~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~ 342 (415)
T 2hqs_A 269 -NTEPTWFPDSQNLAFTSDQA-GRPQVYKVNINGGAPQRITWEGS----QNQDADVSSDGKFMVMVSSNGGQQHIAKQDL 342 (415)
T ss_dssp -EEEEEECTTSSEEEEEECTT-SSCEEEEEETTSSCCEECCCSSS----EEEEEEECTTSSEEEEEEECSSCEEEEEEET
T ss_pred -ccceEECCCCCEEEEEECCC-CCcEEEEEECCCCCEEEEecCCC----cccCeEECCCCCEEEEEECcCCceEEEEEEC
Confidence 01122 2565 44433322 23468888998876554432111 12233333 676544444 3 245666665
Q ss_pred cccCCCCCeEEEEEecCCCCeeEEEEEeCCeEE-EEECCc---EEEEEECCCCcEEEe
Q 047931 264 KEYGVKESWTRVFIHQDPNNVWPLCLWKNSTKL-LVINRK---NLLVCDCNNEGSEDV 317 (339)
Q Consensus 264 ~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~i~-~~~~~~---~~~~yd~~t~~~~~v 317 (339)
+. .+.. .+........+++.++|+.+ +...+. .++.+|++++..+.+
T Consensus 343 ~~----~~~~---~l~~~~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l 393 (415)
T 2hqs_A 343 AT----GGVQ---VLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARL 393 (415)
T ss_dssp TT----CCEE---ECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEEC
T ss_pred CC----CCEE---EecCCCCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEe
Confidence 53 2232 22221124556777888644 443333 699999999888877
No 71
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=85.60 E-value=13 Score=30.75 Aligned_cols=107 Identities=7% Similarity=-0.071 Sum_probs=63.9
Q ss_pred CCe-EEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCeEEEEEeCCCeEEEEEEcccCCCCCeEEE
Q 047931 198 NGA-LHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDCLCLQFFKGKMKEHWIMKEYGVKESWTRV 275 (339)
Q Consensus 198 ~G~-lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~ 275 (339)
+|. +||..... ..|..+|..++ .+.+..|... ...+... +|+|++.......+.+|..++ .+....
T Consensus 38 ~g~~l~~~~~~~---~~i~~~~~~~~-~~~~~~~~~~----~~~l~~~~dg~l~v~~~~~~~i~~~d~~~----g~~~~~ 105 (296)
T 3e5z_A 38 ARSAVIFSDVRQ---NRTWAWSDDGQ-LSPEMHPSHH----QNGHCLNKQGHLIACSHGLRRLERQREPG----GEWESI 105 (296)
T ss_dssp GGTEEEEEEGGG---TEEEEEETTSC-EEEEESSCSS----EEEEEECTTCCEEEEETTTTEEEEECSTT----CCEEEE
T ss_pred CCCEEEEEeCCC---CEEEEEECCCC-eEEEECCCCC----cceeeECCCCcEEEEecCCCeEEEEcCCC----CcEEEE
Confidence 565 99988664 48999999988 7766554432 2334443 788876665667777776543 234332
Q ss_pred EEecC--CC-CeeEEEEEeCCeEEEEEC------------------CcEEEEEECCCCcEEEe
Q 047931 276 FIHQD--PN-NVWPLCLWKNSTKLLVIN------------------RKNLLVCDCNNEGSEDV 317 (339)
Q Consensus 276 ~~i~~--~~-~~~~~~~~~~~~i~~~~~------------------~~~~~~yd~~t~~~~~v 317 (339)
..... .. ...-+++.++|.+++... ...++.+|.+ ++.+.+
T Consensus 106 ~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~ 167 (296)
T 3e5z_A 106 ADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAP 167 (296)
T ss_dssp ECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEE
T ss_pred eeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEe
Confidence 21111 11 123466777888777421 2368999988 555544
No 72
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=85.60 E-value=14 Score=30.38 Aligned_cols=188 Identities=7% Similarity=-0.092 Sum_probs=94.2
Q ss_pred eeCceEEEccCCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCC-ce
Q 047931 100 SCNGLVCTTPKPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMN-SW 177 (339)
Q Consensus 100 s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~-~W 177 (339)
+.++++.....++.+.|+|..+++....-..... ....+.+ ..+.+-+..-. ...+.+++..+. ..
T Consensus 27 ~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~-------~v~~~~~~~~~~~l~~~~~-----dg~i~~~~~~~~~~~ 94 (313)
T 3odt_A 27 VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQG-------FLNSVCYDSEKELLLFGGK-----DTMINGVPLFATSGE 94 (313)
T ss_dssp EETTEEEEEETTSEEEEEEESSSEEEEEEEECSS-------CEEEEEEETTTTEEEEEET-----TSCEEEEETTCCTTS
T ss_pred cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCc-------cEEEEEECCCCCEEEEecC-----CCeEEEEEeeecCCC
Confidence 3444555555567888999877654333222111 1444555 33444333322 334566665432 11
Q ss_pred EEecccCCccCccCCCceEECCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEECCeEEEEEeCCCe
Q 047931 178 RRVLASGYTRPLINVPGTLTNGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVLGDCLCLQFFKGKM 257 (339)
Q Consensus 178 ~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~~G~L~~v~~~~~~ 257 (339)
+.+..+... ...-..+..+|.....+..+ ..|..+|.. +....+...... -........++.+.++...+..
T Consensus 95 ~~~~~~~~~--~~~i~~~~~~~~~l~~~~~d---~~i~~~d~~-~~~~~~~~~~~~--v~~~~~~~~~~~~l~~~~~d~~ 166 (313)
T 3odt_A 95 DPLYTLIGH--QGNVCSLSFQDGVVISGSWD---KTAKVWKEG-SLVYNLQAHNAS--VWDAKVVSFSENKFLTASADKT 166 (313)
T ss_dssp CC-CEECCC--SSCEEEEEEETTEEEEEETT---SEEEEEETT-EEEEEEECCSSC--EEEEEEEETTTTEEEEEETTSC
T ss_pred Ccccchhhc--ccCEEEEEecCCEEEEEeCC---CCEEEEcCC-cEEEecccCCCc--eeEEEEccCCCCEEEEEECCCC
Confidence 111111111 01112344456555444443 478888832 222333221111 0111222226777777778888
Q ss_pred EEEEEEcccCCCCCeEEEEEecC--CCCeeEEEEEeCCeEEEEECCcEEEEEECCCCcEE
Q 047931 258 KEHWIMKEYGVKESWTRVFIHQD--PNNVWPLCLWKNSTKLLVINRKNLLVCDCNNEGSE 315 (339)
Q Consensus 258 l~iW~l~~~~~~~~W~~~~~i~~--~~~~~~~~~~~~~~i~~~~~~~~~~~yd~~t~~~~ 315 (339)
+.+|.... ....+.. .-...-+++.+++.++....++.+..||+++++..
T Consensus 167 i~i~d~~~--------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~ 218 (313)
T 3odt_A 167 IKLWQNDK--------VIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVL 218 (313)
T ss_dssp EEEEETTE--------EEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEE
T ss_pred EEEEecCc--------eEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhh
Confidence 99997221 1223322 12256677778888666666778999999987744
No 73
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=85.53 E-value=17 Score=31.38 Aligned_cols=81 Identities=12% Similarity=0.186 Sum_probs=48.5
Q ss_pred CCeEEEEEe-CC-------CeEEEEEEcccCCCCCeEEEEEecCCCCeeEEEEEeCCeEEEEECCcEEEEEECCCCcEEE
Q 047931 245 GDCLCLQFF-KG-------KMKEHWIMKEYGVKESWTRVFIHQDPNNVWPLCLWKNSTKLLVINRKNLLVCDCNNEGSED 316 (339)
Q Consensus 245 ~G~L~~v~~-~~-------~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~yd~~t~~~~~ 316 (339)
+++||+... .. ..-.||+.+- .+...+.+++..- ..-+++.++|+.++..+...+.+||.+|++++.
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~----~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~~~v~v~D~~t~~l~~ 339 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDT----KTKQRVARIPGRD-ALSMTIDQQRNLMLTLDGGNVNVYDISQPEPKL 339 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEET----TTTEEEEEEECTT-CCEEEEETTTTEEEEECSSCEEEEECSSSSCEE
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEEC----CCCcEEEEEecCC-eeEEEECCCCCEEEEeCCCeEEEEECCCCccee
Confidence 467777654 21 1224444442 2245667776533 556677888887776655679999999997676
Q ss_pred eEE-eCCCCccceeE
Q 047931 317 VAV-ADVPNWNSACV 330 (339)
Q Consensus 317 v~~-~~~~~~~~~~~ 330 (339)
+.. .+.......+.
T Consensus 340 ~~~i~~~G~~P~~~~ 354 (361)
T 2oiz_A 340 LRTIEGAAEASLQVQ 354 (361)
T ss_dssp EEEETTSCSSEEEEE
T ss_pred eEEeccCCCCcEEEE
Confidence 654 34344433333
No 74
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=85.11 E-value=18 Score=31.22 Aligned_cols=182 Identities=10% Similarity=0.019 Sum_probs=93.8
Q ss_pred CCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEEecccCCccC
Q 047931 110 KPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRVLASGYTRP 188 (339)
Q Consensus 110 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~~~ 188 (339)
.+..+.|+|+.|++.......... ...+.+ ..+.+-+. .. ...+.++...++.-...........
T Consensus 155 ~d~~i~iwd~~~~~~~~~~~~~~~--------V~~v~fspdg~~l~s-~s-----~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (365)
T 4h5i_A 155 VPAIMRIIDPSDLTEKFEIETRGE--------VKDLHFSTDGKVVAY-IT-----GSSLEVISTVTGSCIARKTDFDKNW 220 (365)
T ss_dssp SSCEEEEEETTTTEEEEEEECSSC--------CCEEEECTTSSEEEE-EC-----SSCEEEEETTTCCEEEEECCCCTTE
T ss_pred CCCEEEEeECCCCcEEEEeCCCCc--------eEEEEEccCCceEEe-cc-----ceeEEEEEeccCcceeeeecCCCCC
Confidence 356899999999886654432222 334555 23333222 21 2245556555554332211100000
Q ss_pred ccCCCceEECCeEEEEEecC-CCCeEEEEEECCCceeeee---cCCCCCCCCceeEEEEE-CCeEEEEEeCCCeEEEEEE
Q 047931 189 LINVPGTLTNGALHWRLQKH-GGDFVLAAFDLVEERFKEF---PLPDASTSFRFFGTGVL-GDCLCLQFFKGKMKEHWIM 263 (339)
Q Consensus 189 ~~~~~~v~~~G~lyw~~~~~-~~~~~il~fD~~~~~~~~i---~lP~~~~~~~~~~l~~~-~G~L~~v~~~~~~l~iW~l 263 (339)
....-...-+|.....+... +....+...|......... .+..... .-..+... +|++.+....+..+.||.+
T Consensus 221 ~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~V~~~~~Spdg~~lasgs~D~~V~iwd~ 298 (365)
T 4h5i_A 221 SLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFK--GITSMDVDMKGELAVLASNDNSIALVKL 298 (365)
T ss_dssp EEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCS--CEEEEEECTTSCEEEEEETTSCEEEEET
T ss_pred CEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCC--CeEeEEECCCCCceEEEcCCCEEEEEEC
Confidence 00000122355555544433 2234566666665544332 1211111 12234433 8888777778889999988
Q ss_pred cccCCCCCeEEEEEecC--CCCeeEEEEEeCCeEEEEE-CCcEEEEEECCCCc
Q 047931 264 KEYGVKESWTRVFIHQD--PNNVWPLCLWKNSTKLLVI-NRKNLLVCDCNNEG 313 (339)
Q Consensus 264 ~~~~~~~~W~~~~~i~~--~~~~~~~~~~~~~~i~~~~-~~~~~~~yd~~t~~ 313 (339)
+. ...+.++.. ...+.-+++.++|+.+... .+..+-+||+.++.
T Consensus 299 ~~------~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~~ 345 (365)
T 4h5i_A 299 KD------LSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLNY 345 (365)
T ss_dssp TT------TEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTTT
T ss_pred CC------CcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 74 234455532 2236778888999877754 45679999986543
No 75
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=84.92 E-value=19 Score=31.29 Aligned_cols=187 Identities=9% Similarity=-0.006 Sum_probs=98.5
Q ss_pred eEEEccCCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCce-EEec
Q 047931 104 LVCTTPKPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSW-RRVL 181 (339)
Q Consensus 104 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W-~~~~ 181 (339)
++.....+..+.|+|..+++....-..... ....+.+ ..+.+-+.+- ....+.+|+.+++.= +.+.
T Consensus 111 ~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~-------~v~~~~~~~~~~~l~s~s-----~d~~i~iwd~~~~~~~~~~~ 178 (420)
T 3vl1_A 111 RFILGTTEGDIKVLDSNFNLQREIDQAHVS-------EITKLKFFPSGEALISSS-----QDMQLKIWSVKDGSNPRTLI 178 (420)
T ss_dssp EEEEEETTSCEEEECTTSCEEEEETTSSSS-------CEEEEEECTTSSEEEEEE-----TTSEEEEEETTTCCCCEEEE
T ss_pred EEEEEECCCCEEEEeCCCcceeeecccccC-------ccEEEEECCCCCEEEEEe-----CCCeEEEEeCCCCcCceEEc
Confidence 444444567899999888876554322211 1555666 3344333322 245788888876532 1121
Q ss_pred ccCCccCccCCCceEE--CCeEEEEEecCCCCeEEEEEECCCceee-eecCCCCCCCCceeEEEE---------------
Q 047931 182 ASGYTRPLINVPGTLT--NGALHWRLQKHGGDFVLAAFDLVEERFK-EFPLPDASTSFRFFGTGV--------------- 243 (339)
Q Consensus 182 ~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~~~~~-~i~lP~~~~~~~~~~l~~--------------- 243 (339)
..... -..+.+ +|.....+..+ ..|..+|+.+.+.. .+..+..... ....+..
T Consensus 179 ~h~~~-----v~~~~~~~~~~~l~s~~~d---~~v~iwd~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~ 249 (420)
T 3vl1_A 179 GHRAT-----VTDIAIIDRGRNVLSASLD---GTIRLWECGTGTTIHTFNRKENPHD-GVNSIALFVGTDRQLHEISTSK 249 (420)
T ss_dssp CCSSC-----EEEEEEETTTTEEEEEETT---SCEEEEETTTTEEEEEECBTTBTTC-CEEEEEEEECCCSSCGGGCCCC
T ss_pred CCCCc-----EEEEEEcCCCCEEEEEcCC---CcEEEeECCCCceeEEeecCCCCCC-CccEEEEecCCcceeeecccCc
Confidence 11100 011111 45443333332 46888898876543 3343222111 1111111
Q ss_pred -------ECCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecC--CCCeeEEEEEeCCe-EEEEE-CCcEEEEEECCCC
Q 047931 244 -------LGDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQD--PNNVWPLCLWKNST-KLLVI-NRKNLLVCDCNNE 312 (339)
Q Consensus 244 -------~~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~--~~~~~~~~~~~~~~-i~~~~-~~~~~~~yd~~t~ 312 (339)
-+|++.++...+..+.+|.++.. .....+.. .-.+.-+++.+++. +++.. .++.+..||++++
T Consensus 250 v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~ 323 (420)
T 3vl1_A 250 KNNLEFGTYGKYVIAGHVSGVITVHNVFSK------EQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSP 323 (420)
T ss_dssp CCTTCSSCTTEEEEEEETTSCEEEEETTTC------CEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCT
T ss_pred ccceEEcCCCCEEEEEcCCCeEEEEECCCC------ceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCC
Confidence 26777777778888999998752 12333332 12256677777776 55544 4567999999986
Q ss_pred c--EEEe
Q 047931 313 G--SEDV 317 (339)
Q Consensus 313 ~--~~~v 317 (339)
+ +..+
T Consensus 324 ~~~~~~~ 330 (420)
T 3vl1_A 324 ECPVGEF 330 (420)
T ss_dssp TSCSEEE
T ss_pred cCchhhh
Confidence 5 3444
No 76
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=84.85 E-value=20 Score=31.59 Aligned_cols=183 Identities=11% Similarity=0.022 Sum_probs=94.0
Q ss_pred CEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEEecccCCccCcc
Q 047931 112 KIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRVLASGYTRPLI 190 (339)
Q Consensus 112 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~~~~~ 190 (339)
..++++|.-+++.+.+...... ...+.+ ..+.+ ++... .......+.+++.+++..+.+...+...
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~~--------v~~~~~Spdg~~-la~~s-~~~~~~~i~~~d~~tg~~~~l~~~~~~~--- 225 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQP--------LMSPAWSPDGSK-LAYVT-FESGRSALVIQTLANGAVRQVASFPRHN--- 225 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESSC--------EEEEEECTTSSE-EEEEE-CTTSSCEEEEEETTTCCEEEEECCSSCE---
T ss_pred ceEEEEcCCCCCCEEEeCCCCc--------ceeeEEcCCCCE-EEEEE-ecCCCcEEEEEECCCCcEEEeecCCCcc---
Confidence 5888999876665555432222 334444 23333 33322 1122468899999988776654332111
Q ss_pred CCCceEECCe-EEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCeEEEEEe-CCCeEEEEEEcccC
Q 047931 191 NVPGTLTNGA-LHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDCLCLQFF-KGKMKEHWIMKEYG 267 (339)
Q Consensus 191 ~~~~v~~~G~-lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~L~~v~~-~~~~l~iW~l~~~~ 267 (339)
......-+|. +.+..... ....|..+|+.+.+...+.-... ....+.-. +|+..++.. ......||.++-.+
T Consensus 226 ~~~~~spdg~~la~~~~~~-g~~~i~~~d~~~~~~~~l~~~~~----~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~ 300 (415)
T 2hqs_A 226 GAPAFSPDGSKLAFALSKT-GSLNLYVMDLASGQIRQVTDGRS----NNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING 300 (415)
T ss_dssp EEEEECTTSSEEEEEECTT-SSCEEEEEETTTCCEEECCCCSS----CEEEEEECTTSSEEEEEECTTSSCEEEEEETTS
T ss_pred cCEEEcCCCCEEEEEEecC-CCceEEEEECCCCCEEeCcCCCC----cccceEECCCCCEEEEEECCCCCcEEEEEECCC
Confidence 0101122465 44444322 23468889998877655432111 12223333 676444444 44555677666322
Q ss_pred CCCCeEEEEEecCC-CCeeEEEEEeCCeEEE-EECC---cEEEEEECCCCcEEEe
Q 047931 268 VKESWTRVFIHQDP-NNVWPLCLWKNSTKLL-VINR---KNLLVCDCNNEGSEDV 317 (339)
Q Consensus 268 ~~~~W~~~~~i~~~-~~~~~~~~~~~~~i~~-~~~~---~~~~~yd~~t~~~~~v 317 (339)
.+ ..++... -...-+++.++|+.++ ...+ ..++.+|+++++.+.+
T Consensus 301 --~~---~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l 350 (415)
T 2hqs_A 301 --GA---PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVL 350 (415)
T ss_dssp --SC---CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEEC
T ss_pred --CC---EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEe
Confidence 11 1122211 1133456667886444 3322 4699999999988665
No 77
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=84.41 E-value=16 Score=30.27 Aligned_cols=199 Identities=6% Similarity=-0.082 Sum_probs=101.1
Q ss_pred eeeCceEEEc-cCCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCc
Q 047931 99 GSCNGLVCTT-PKPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNS 176 (339)
Q Consensus 99 ~s~~GLl~~~-~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~ 176 (339)
...+|-+... .....++.++|.+++...+.... . ..++.+ ..+.+ ++. . ...+.+|+.+++.
T Consensus 21 ~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~-~--------~~~i~~~~dG~l-~v~-~-----~~~l~~~d~~~g~ 84 (297)
T 3g4e_A 21 EEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDA-P--------VSSVALRQSGGY-VAT-I-----GTKFCALNWKEQS 84 (297)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTTCCEEEEECSS-C--------EEEEEEBTTSSE-EEE-E-----TTEEEEEETTTTE
T ss_pred ECCCCEEEEEECCCCEEEEEECCCCcEEEEeCCC-c--------eEEEEECCCCCE-EEE-E-----CCeEEEEECCCCc
Confidence 3334444433 34678999999998765543221 1 334555 33442 222 2 3478889998888
Q ss_pred eEEecccCCccCccCCCceEE--CCeEEEEEecC--------CCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE-C
Q 047931 177 WRRVLASGYTRPLINVPGTLT--NGALHWRLQKH--------GGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-G 245 (339)
Q Consensus 177 W~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~--------~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~ 245 (339)
.+.+..............+.+ +|.+|.-.... .....+..+|.....-.... ... ..-.++.. +
T Consensus 85 ~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~---~~~--~pngi~~spd 159 (297)
T 3g4e_A 85 AVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFD---QVD--ISNGLDWSLD 159 (297)
T ss_dssp EEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEE---EES--BEEEEEECTT
T ss_pred EEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEee---ccc--cccceEEcCC
Confidence 877643321111111112333 58865544321 12357888887643222111 110 11123333 5
Q ss_pred Ce-EEEEEeCCCeEEEEEEcccCCCCCeEEEE---EecCCCC-eeEEEEEeCCeEEEEEC-CcEEEEEECCCCc-EEEeE
Q 047931 246 DC-LCLQFFKGKMKEHWIMKEYGVKESWTRVF---IHQDPNN-VWPLCLWKNSTKLLVIN-RKNLLVCDCNNEG-SEDVA 318 (339)
Q Consensus 246 G~-L~~v~~~~~~l~iW~l~~~~~~~~W~~~~---~i~~~~~-~~~~~~~~~~~i~~~~~-~~~~~~yd~~t~~-~~~v~ 318 (339)
|+ |+++......+.+|.++.. +....... .+....+ ..-+++..+|.+++... ..++..||+++++ ...+.
T Consensus 160 g~~lyv~~~~~~~i~~~~~d~~--~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~ 237 (297)
T 3g4e_A 160 HKIFYYIDSLSYSVDAFDYDLQ--TGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVK 237 (297)
T ss_dssp SCEEEEEEGGGTEEEEEEECTT--TCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEE
T ss_pred CCEEEEecCCCCcEEEEeccCC--CCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEE
Confidence 64 6666666677777766421 12333221 2221111 22345556777777653 4569999999766 45555
Q ss_pred Ee
Q 047931 319 VA 320 (339)
Q Consensus 319 ~~ 320 (339)
+.
T Consensus 238 ~p 239 (297)
T 3g4e_A 238 LP 239 (297)
T ss_dssp CS
T ss_pred CC
Confidence 43
No 78
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=83.99 E-value=18 Score=30.34 Aligned_cols=203 Identities=8% Similarity=-0.029 Sum_probs=102.1
Q ss_pred eCceEEE-ccCCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceE
Q 047931 101 CNGLVCT-TPKPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWR 178 (339)
Q Consensus 101 ~~GLl~~-~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~ 178 (339)
.+|-+.+ ......++++||.+++...+...... ...++.+ ..+. .++...........+.+|+..++.-+
T Consensus 54 ~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-------~~~~i~~~~dg~-l~v~~~~~~~~~~~i~~~d~~~~~~~ 125 (333)
T 2dg1_A 54 RQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKA-------NPAAIKIHKDGR-LFVCYLGDFKSTGGIFAATENGDNLQ 125 (333)
T ss_dssp TTSCEEEEETTTCEEEEECTTTCCEEEEEECSSS-------SEEEEEECTTSC-EEEEECTTSSSCCEEEEECTTSCSCE
T ss_pred CCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCC-------CcceEEECCCCc-EEEEeCCCCCCCceEEEEeCCCCEEE
Confidence 4565544 33456899999999887665321111 1444555 2332 22221100001246777877776554
Q ss_pred Ee-cccCCccCccCCCceEE--CCeEEEEEecC---CCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCe-EEE
Q 047931 179 RV-LASGYTRPLINVPGTLT--NGALHWRLQKH---GGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDC-LCL 250 (339)
Q Consensus 179 ~~-~~~~~~~~~~~~~~v~~--~G~lyw~~~~~---~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~-L~~ 250 (339)
.+ ...... .....+.+ +|.+|...... .....|..+|..+.++..+.- ... ....++.. +|+ |++
T Consensus 126 ~~~~~~~~~---~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~--~~~~i~~~~dg~~l~v 198 (333)
T 2dg1_A 126 DIIEDLSTA---YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ--NIS--VANGIALSTDEKVLWV 198 (333)
T ss_dssp EEECSSSSC---CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE--EES--SEEEEEECTTSSEEEE
T ss_pred EEEccCccC---CcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeec--CCC--cccceEECCCCCEEEE
Confidence 32 211111 01112222 57766544321 113578999988776655421 111 11233333 665 776
Q ss_pred EEeCCCeEEEEEEcccCCCCCeEEE-EEe--cC-CC-CeeEEEEEeCCeEEEEEC-CcEEEEEECCCCcEEEeEEe
Q 047931 251 QFFKGKMKEHWIMKEYGVKESWTRV-FIH--QD-PN-NVWPLCLWKNSTKLLVIN-RKNLLVCDCNNEGSEDVAVA 320 (339)
Q Consensus 251 v~~~~~~l~iW~l~~~~~~~~W~~~-~~i--~~-~~-~~~~~~~~~~~~i~~~~~-~~~~~~yd~~t~~~~~v~~~ 320 (339)
.......+.+|.++..+ ...... ..+ .. .. ...-+++..+|.+++... +..+..||++++..+.+...
T Consensus 199 ~~~~~~~i~~~d~~~~g--~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~~~~~~~~~ 272 (333)
T 2dg1_A 199 TETTANRLHRIALEDDG--VTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIP 272 (333)
T ss_dssp EEGGGTEEEEEEECTTS--SSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTTSCEEEEEECT
T ss_pred EeCCCCeEEEEEecCCC--cCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECCCCCEEEEEEcC
Confidence 66566778888776322 222211 111 11 11 133355666778777653 45799999987777776543
No 79
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=83.71 E-value=17 Score=30.00 Aligned_cols=184 Identities=10% Similarity=0.056 Sum_probs=92.3
Q ss_pred eEEEccCCCEEEEEccccccee-ecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCC--ceEE
Q 047931 104 LVCTTPKPKIFFVLNPLTRESK-RIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMN--SWRR 179 (339)
Q Consensus 104 Ll~~~~~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~--~W~~ 179 (339)
++........++++|+.|++.. .++..... . .....+ ..+. ++... ...+..|+. ++ .|+.
T Consensus 7 ~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~-----~--~~~~~~~pdG~--ilvs~-----~~~V~~~d~-~G~~~W~~ 71 (276)
T 3no2_A 7 LLVGGSGWNKIAIINKDTKEIVWEYPLEKGW-----E--CNSVAATKAGE--ILFSY-----SKGAKMITR-DGRELWNI 71 (276)
T ss_dssp EEEECTTCSEEEEEETTTTEEEEEEECCTTC-----C--CCEEEECTTSC--EEEEC-----BSEEEEECT-TSCEEEEE
T ss_pred EEEeeCCCCEEEEEECCCCeEEEEeCCCccC-----C--CcCeEECCCCC--EEEeC-----CCCEEEECC-CCCEEEEE
Confidence 3344345678899999888743 33332100 0 111222 2222 22221 235677776 33 5765
Q ss_pred ecccCCccCccCCCceEECCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCC--ceeEEE-EECCeEEEEEeCCC
Q 047931 180 VLASGYTRPLINVPGTLTNGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSF--RFFGTG-VLGDCLCLQFFKGK 256 (339)
Q Consensus 180 ~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~--~~~~l~-~~~G~L~~v~~~~~ 256 (339)
-..-... .....+..||.++...... ...+++||...+....+.+....... ....+. ..+|.+.++.....
T Consensus 72 ~~~~~~~---~~~~~~~~dG~~lv~~~~~--~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~ 146 (276)
T 3no2_A 72 AAPAGCE---MQTARILPDGNALVAWCGH--PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATS 146 (276)
T ss_dssp ECCTTCE---EEEEEECTTSCEEEEEEST--TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTT
T ss_pred cCCCCcc---ccccEECCCCCEEEEecCC--CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCC
Confidence 4311111 1112345677776655441 25789999876655555443321100 011112 23777766665666
Q ss_pred eEEEEEEcccCCCCCeEEEEEecC-CCCeeEEEEEeCCeEEEEEC-CcEEEEEECCCCcEE
Q 047931 257 MKEHWIMKEYGVKESWTRVFIHQD-PNNVWPLCLWKNSTKLLVIN-RKNLLVCDCNNEGSE 315 (339)
Q Consensus 257 ~l~iW~l~~~~~~~~W~~~~~i~~-~~~~~~~~~~~~~~i~~~~~-~~~~~~yd~~t~~~~ 315 (339)
.+..|..+ | +..|.... .. +. -.....+|++++... +.+++.+|++|++..
T Consensus 147 ~v~~~d~~--G-~~~w~~~~--~~~~~---~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~ 199 (276)
T 3no2_A 147 EVREIAPN--G-QLLNSVKL--SGTPF---SSAFLDNGDCLVACGDAHCFVQLNLESNRIV 199 (276)
T ss_dssp EEEEECTT--S-CEEEEEEC--SSCCC---EEEECTTSCEEEECBTTSEEEEECTTTCCEE
T ss_pred EEEEECCC--C-CEEEEEEC--CCCcc---ceeEcCCCCEEEEeCCCCeEEEEeCcCCcEE
Confidence 66665544 2 34565432 21 12 123345777777554 447999999977753
No 80
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=83.63 E-value=8.8 Score=34.05 Aligned_cols=109 Identities=8% Similarity=0.027 Sum_probs=62.2
Q ss_pred ECCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCe-EEEEEeCCCeEEEEEEcccCCCCCeE-
Q 047931 197 TNGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDC-LCLQFFKGKMKEHWIMKEYGVKESWT- 273 (339)
Q Consensus 197 ~~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~-L~~v~~~~~~l~iW~l~~~~~~~~W~- 273 (339)
-+|.+||..... ..|..+|+++.+...+...... .. ++.. +|. |++....... .||.++..+ .|.
T Consensus 140 ~~g~lyv~d~~~---~~I~~id~~~g~~~~~~~~~~~---~~--ia~~~~g~~l~~~d~~~~~-~I~~~d~~~---~~~~ 207 (409)
T 3hrp_A 140 GNNTVLAYQRDD---PRVRLISVDDNKVTTVHPGFKG---GK--PAVTKDKQRVYSIGWEGTH-TVYVYMKAS---GWAP 207 (409)
T ss_dssp STTEEEEEETTT---TEEEEEETTTTEEEEEEETCCB---CB--CEECTTSSEEEEEBSSTTC-EEEEEEGGG---TTCE
T ss_pred CCCCEEEEecCC---CcEEEEECCCCEEEEeeccCCC---Cc--eeEecCCCcEEEEecCCCc-eEEEEEcCC---Ccee
Confidence 368999987653 4899999998877766322111 11 3333 444 4444443321 566666432 233
Q ss_pred -EEEEecC-CC-CeeEEEEEe-CCeEEEEECCcEEEEEECCCCcEEEe
Q 047931 274 -RVFIHQD-PN-NVWPLCLWK-NSTKLLVINRKNLLVCDCNNEGSEDV 317 (339)
Q Consensus 274 -~~~~i~~-~~-~~~~~~~~~-~~~i~~~~~~~~~~~yd~~t~~~~~v 317 (339)
....+.. .. ...-+++.+ +|.+++...+..++.||+++++.+.+
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 2212222 11 234466776 66777754455799999999886655
No 81
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=83.46 E-value=22 Score=30.97 Aligned_cols=69 Identities=12% Similarity=0.032 Sum_probs=44.7
Q ss_pred CCeEEEEEeCC-------CeEEEEEEcccCCCCCeEEEEEecCCCCeeEEEEEeCCe-EEEEEC--CcEEEEEECCCCcE
Q 047931 245 GDCLCLQFFKG-------KMKEHWIMKEYGVKESWTRVFIHQDPNNVWPLCLWKNST-KLLVIN--RKNLLVCDCNNEGS 314 (339)
Q Consensus 245 ~G~L~~v~~~~-------~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~-i~~~~~--~~~~~~yd~~t~~~ 314 (339)
+++||+..... ..=.||+++- .+...+.+|+..-...-+++.++|+ .++..+ +..+.++|.+|++.
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~----~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~v 353 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTG----LVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQ 353 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEEC----CCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCE
Confidence 45677765411 1236788874 4577777776532245667778887 666654 45799999999886
Q ss_pred EEe
Q 047931 315 EDV 317 (339)
Q Consensus 315 ~~v 317 (339)
...
T Consensus 354 v~~ 356 (373)
T 2mad_H 354 DQS 356 (373)
T ss_pred Eee
Confidence 543
No 82
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=83.31 E-value=21 Score=30.62 Aligned_cols=64 Identities=6% Similarity=0.029 Sum_probs=40.7
Q ss_pred CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecC-------CCCeeEEEEEeCCeEEEEEC-C---cEEEEEECCCCc
Q 047931 245 GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQD-------PNNVWPLCLWKNSTKLLVIN-R---KNLLVCDCNNEG 313 (339)
Q Consensus 245 ~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~-------~~~~~~~~~~~~~~i~~~~~-~---~~~~~yd~~t~~ 313 (339)
+| +.++...+..+.+|.++. . ..+.++.. .-.+.-+++.+++.+++... + +.+..||+++++
T Consensus 197 ~~-~l~~~~~dg~i~i~d~~~----~--~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~ 269 (397)
T 1sq9_A 197 RG-LIATGFNNGTVQISELST----L--RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGE 269 (397)
T ss_dssp TS-EEEEECTTSEEEEEETTT----T--EEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCC
T ss_pred Cc-eEEEEeCCCcEEEEECCC----C--ceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCc
Confidence 56 555555888999999875 2 22233332 22256667777777666554 4 579999998876
Q ss_pred EE
Q 047931 314 SE 315 (339)
Q Consensus 314 ~~ 315 (339)
..
T Consensus 270 ~~ 271 (397)
T 1sq9_A 270 RI 271 (397)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 83
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=83.29 E-value=20 Score=30.35 Aligned_cols=96 Identities=10% Similarity=-0.043 Sum_probs=54.6
Q ss_pred EEEEEECCCce-eeeecCCCCCCCCceeEEEE-E--CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecCCCCeeEEE
Q 047931 213 VLAAFDLVEER-FKEFPLPDASTSFRFFGTGV-L--GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQDPNNVWPLC 288 (339)
Q Consensus 213 ~il~fD~~~~~-~~~i~lP~~~~~~~~~~l~~-~--~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~ 288 (339)
.+..+|..+.+ .+.+..+... .-..+.. - +|.+.+....+..+.+|.++.. . -.........-.+.-++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~---~-~~~~~~~~~~~~i~~~~ 177 (343)
T 3lrv_A 105 QITILDSKTNKVLREIEVDSAN---EIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDD---S-QYIVHSAKSDVEYSSGV 177 (343)
T ss_dssp EEEEEETTTCCEEEEEECCCSS---CEEEEECCC---CCEEEEEETTCCEEEEESSSS---C-EEEEECCCSSCCCCEEE
T ss_pred ceEEeecCCcceeEEeecCCCC---CEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCC---c-EEEEEecCCCCceEEEE
Confidence 45556666655 4444433221 1112221 1 5666666668889999998852 2 12111111121256677
Q ss_pred EEeCCeEEEEE-CCcEEEEEECCCCcEE
Q 047931 289 LWKNSTKLLVI-NRKNLLVCDCNNEGSE 315 (339)
Q Consensus 289 ~~~~~~i~~~~-~~~~~~~yd~~t~~~~ 315 (339)
+.++|.++... .++.+..||+++++..
T Consensus 178 ~~pdg~~lasg~~dg~i~iwd~~~~~~~ 205 (343)
T 3lrv_A 178 LHKDSLLLALYSPDGILDVYNLSSPDQA 205 (343)
T ss_dssp ECTTSCEEEEECTTSCEEEEESSCTTSC
T ss_pred ECCCCCEEEEEcCCCEEEEEECCCCCCC
Confidence 88888877764 4567999999988754
No 84
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=82.99 E-value=21 Score=30.49 Aligned_cols=64 Identities=14% Similarity=0.093 Sum_probs=44.1
Q ss_pred CCeEEEEEeCCCe-EEEEEEcccCCCCCeEEEEEec---CCCCeeEEEEEeCCeEEEEE-CCcEEEEEECCCCcE
Q 047931 245 GDCLCLQFFKGKM-KEHWIMKEYGVKESWTRVFIHQ---DPNNVWPLCLWKNSTKLLVI-NRKNLLVCDCNNEGS 314 (339)
Q Consensus 245 ~G~L~~v~~~~~~-l~iW~l~~~~~~~~W~~~~~i~---~~~~~~~~~~~~~~~i~~~~-~~~~~~~yd~~t~~~ 314 (339)
+|++.+....+.+ +.||.++. ...+.++. ..-.+.-+++.++|..++.. .++.+..||+++...
T Consensus 206 ~g~~l~s~s~d~~~v~iwd~~~------~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~ 274 (355)
T 3vu4_A 206 KSDMVATCSQDGTIIRVFKTED------GVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQD 274 (355)
T ss_dssp TSSEEEEEETTCSEEEEEETTT------CCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSC
T ss_pred CCCEEEEEeCCCCEEEEEECCC------CcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCC
Confidence 7887777777776 99999875 23345554 22236677788888766654 456799999987653
No 85
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=82.88 E-value=19 Score=29.86 Aligned_cols=98 Identities=11% Similarity=0.094 Sum_probs=55.3
Q ss_pred EEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecCCCCeeEEEEEe
Q 047931 213 VLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQDPNNVWPLCLWK 291 (339)
Q Consensus 213 ~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~ 291 (339)
.|..+|+++.+...+.++.... ....+... +|+..++. ...+.+|.++. ...+..+...-...-+++.+
T Consensus 220 ~v~~~d~~~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~--~~~v~~~d~~~------~~~~~~~~~~~~~~~~~~s~ 289 (337)
T 1pby_B 220 GLLTMDLETGEMAMREVRIMDV--FYFSTAVNPAKTRAFGA--YNVLESFDLEK------NASIKRVPLPHSYYSVNVST 289 (337)
T ss_dssp EEEEEETTTCCEEEEEEEECSS--CEEEEEECTTSSEEEEE--ESEEEEEETTT------TEEEEEEECSSCCCEEEECT
T ss_pred ceEEEeCCCCCceEeecCCCCC--ceeeEEECCCCCEEEEe--CCeEEEEECCC------CcCcceecCCCceeeEEECC
Confidence 6889999988776444332221 12223333 55544444 46777777653 23333443321234567777
Q ss_pred CCeEEEEE-CCcEEEEEECCCCcE-EEeEEe
Q 047931 292 NSTKLLVI-NRKNLLVCDCNNEGS-EDVAVA 320 (339)
Q Consensus 292 ~~~i~~~~-~~~~~~~yd~~t~~~-~~v~~~ 320 (339)
+|+.++.. .+..+.+||+++++. +.+...
T Consensus 290 dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 290 DGSTVWLGGALGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp TSCEEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred CCCEEEEEcCCCcEEEEECcCCcEEEEEEcC
Confidence 78644444 455799999998874 455444
No 86
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=82.77 E-value=7 Score=40.06 Aligned_cols=182 Identities=6% Similarity=-0.015 Sum_probs=92.4
Q ss_pred EEEccCCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEEeccc
Q 047931 105 VCTTPKPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRVLAS 183 (339)
Q Consensus 105 l~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~ 183 (339)
+.....++.+.++|..+++.......... ...++.+ ..+.+-+..- ....+.+|+..++........
T Consensus 976 l~~g~~~g~i~i~d~~~~~~~~~~~~h~~-------~v~~l~~s~dg~~l~s~~-----~dg~i~vwd~~~~~~~~~~~~ 1043 (1249)
T 3sfz_A 976 VAFGDEDGAIKIIELPNNRVFSSGVGHKK-------AVRHIQFTADGKTLISSS-----EDSVIQVWNWQTGDYVFLQAH 1043 (1249)
T ss_dssp EEEEETTSCCEEEETTTTSCEEECCCCSS-------CCCCEEECSSSSCEEEEC-----SSSBEEEEETTTTEEECCBCC
T ss_pred EEEEcCCCCEEEEEcCCCceeeecccCCC-------ceEEEEECCCCCEEEEEc-----CCCEEEEEECCCCceEEEecC
Confidence 33333456777788777654332221111 1333444 3333333221 245688888888765543211
Q ss_pred CCccCccCCCceEECCeEEEEEecCCCCeEEEEEECCCceeee-ecCCCCCCCCceeEEEEE-CCeEEEEEeCCCeEEEE
Q 047931 184 GYTRPLINVPGTLTNGALHWRLQKHGGDFVLAAFDLVEERFKE-FPLPDASTSFRFFGTGVL-GDCLCLQFFKGKMKEHW 261 (339)
Q Consensus 184 ~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~~~~~~-i~lP~~~~~~~~~~l~~~-~G~L~~v~~~~~~l~iW 261 (339)
..... .-...-+|.+.-.+.+ ..+..+|+.+.+... +...... ...+... +|++.++...+..+.+|
T Consensus 1044 ~~~v~---~~~~~~~~~l~~~~~d----g~v~vwd~~~~~~~~~~~~~~~~----v~~~~~s~d~~~l~s~s~d~~v~iw 1112 (1249)
T 3sfz_A 1044 QETVK---DFRLLQDSRLLSWSFD----GTVKVWNVITGRIERDFTCHQGT----VLSCAISSDATKFSSTSADKTAKIW 1112 (1249)
T ss_dssp SSCEE---EEEECSSSEEEEEESS----SEEEEEETTTTCCCEEEECCSSC----CCCEEECSSSSSCEEECCSSCCCEE
T ss_pred CCcEE---EEEEcCCCcEEEEECC----CcEEEEECCCCceeEEEcccCCc----EEEEEECCCCCEEEEEcCCCcEEEE
Confidence 11100 0001113443333333 478889988765432 2221111 1122322 77776666677889999
Q ss_pred EEcccCCCCCeEEEEEecCC-CCeeEEEEEeCCeEEEEE-CCcEEEEEECCCCcEE
Q 047931 262 IMKEYGVKESWTRVFIHQDP-NNVWPLCLWKNSTKLLVI-NRKNLLVCDCNNEGSE 315 (339)
Q Consensus 262 ~l~~~~~~~~W~~~~~i~~~-~~~~~~~~~~~~~i~~~~-~~~~~~~yd~~t~~~~ 315 (339)
.++.... ..++... -.+.-+++.++|..++.. .++.+..||.++++..
T Consensus 1113 d~~~~~~------~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~ 1162 (1249)
T 3sfz_A 1113 SFDLLSP------LHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLL 1162 (1249)
T ss_dssp CSSSSSC------SBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCC
T ss_pred ECCCcce------eeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCceE
Confidence 8875221 1122211 125567777888766654 4556999999887743
No 87
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=82.77 E-value=21 Score=30.21 Aligned_cols=139 Identities=12% Similarity=-0.019 Sum_probs=74.2
Q ss_pred CcEEEEEEeCCCceEEecccCCccCccCCCceEEC----CeEEEEEecCCCCeEEEEEECCCceeeee-cCCCCCCCCce
Q 047931 164 NMSVAIFSLRMNSWRRVLASGYTRPLINVPGTLTN----GALHWRLQKHGGDFVLAAFDLVEERFKEF-PLPDASTSFRF 238 (339)
Q Consensus 164 ~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~v~~~----G~lyw~~~~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~ 238 (339)
.-.+.+|+...+.++.+..+.... ..-..+.+. |.+...+..+ ..|..+|+.+.++..+ .++.... ..
T Consensus 32 dg~i~iw~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~~~l~s~~~d---g~v~iwd~~~~~~~~~~~~~~~~~--~v 104 (379)
T 3jrp_A 32 DKTIKIFEVEGETHKLIDTLTGHE--GPVWRVDWAHPKFGTILASCSYD---GKVLIWKEENGRWSQIAVHAVHSA--SV 104 (379)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCS--SCEEEEEECCGGGCSEEEEEETT---SCEEEEEEETTEEEEEEEECCCSS--CE
T ss_pred CCcEEEEecCCCcceeeeEecCCC--CcEEEEEeCCCCCCCEEEEeccC---CEEEEEEcCCCceeEeeeecCCCc--ce
Confidence 446788888777776654332211 011123332 4444333332 4788889888875544 2222211 12
Q ss_pred eEEEEE-C--CeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecC-CCCeeEEEEEe-------------CCeEEEE-EC
Q 047931 239 FGTGVL-G--DCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQD-PNNVWPLCLWK-------------NSTKLLV-IN 300 (339)
Q Consensus 239 ~~l~~~-~--G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~-~~~~~~~~~~~-------------~~~i~~~-~~ 300 (339)
..+... + |.+.++...+..+.+|.++... .... ..+.. ...+.-+++.+ ++..++. ..
T Consensus 105 ~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~---~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 180 (379)
T 3jrp_A 105 NSVQWAPHEYGPLLLVASSDGKVSVVEFKENG---TTSP-IIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA 180 (379)
T ss_dssp EEEEECCGGGCSEEEEEETTSEEEEEECCTTS---CCCE-EEEECCTTCEEEEEECCCC----------CTTCEEEEEET
T ss_pred EEEEeCCCCCCCEEEEecCCCcEEEEecCCCC---ceee-EEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeC
Confidence 233333 3 7777777788899999998632 1221 22222 22244555555 4555554 44
Q ss_pred CcEEEEEECCCCc
Q 047931 301 RKNLLVCDCNNEG 313 (339)
Q Consensus 301 ~~~~~~yd~~t~~ 313 (339)
++.+..||+++++
T Consensus 181 dg~i~i~d~~~~~ 193 (379)
T 3jrp_A 181 DNLVKIWKYNSDA 193 (379)
T ss_dssp TSCEEEEEEETTT
T ss_pred CCeEEEEEecCCC
Confidence 5679999987665
No 88
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=82.51 E-value=22 Score=30.25 Aligned_cols=151 Identities=9% Similarity=0.037 Sum_probs=77.1
Q ss_pred CcEEEEEEeCC--CceEEecccCCccCccCCCceEECCeEEEEEecCCCCeEEEEEECCCc-eeeee----cC----CC-
Q 047931 164 NMSVAIFSLRM--NSWRRVLASGYTRPLINVPGTLTNGALHWRLQKHGGDFVLAAFDLVEE-RFKEF----PL----PD- 231 (339)
Q Consensus 164 ~~~~~vyss~~--~~W~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~~-~~~~i----~l----P~- 231 (339)
...+.+|+... +..+.+...+... .....+.++|...+.+... ...+..+|+.+. ....+ .. |.
T Consensus 74 ~~~v~~~~~~~~~g~~~~~~~~~~~~--~~p~~~~~dg~~l~~~~~~--~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~ 149 (361)
T 3scy_A 74 QAAVSAFAFDKEKGTLHLLNTQKTMG--ADPCYLTTNGKNIVTANYS--GGSITVFPIGQDGALLPASDVIEFKGSGPDK 149 (361)
T ss_dssp TCEEEEEEEETTTTEEEEEEEEECSS--SCEEEEEECSSEEEEEETT--TTEEEEEEBCTTSCBCSCSEEEECCCCCSCT
T ss_pred CCcEEEEEEeCCCCcEEEeeEeccCC--CCcEEEEECCCEEEEEECC--CCEEEEEEeCCCCcCcccceeEEccCCCCCc
Confidence 34677776544 6776664433211 0111233477755555432 247888887643 22211 11 11
Q ss_pred -CCCCCceeEEEEE-CCe-EEEEEeCCCeEEEEEEcccCCCC--C-eEEE---EEecC--CCCeeEEEEEeCCeEEEEEC
Q 047931 232 -ASTSFRFFGTGVL-GDC-LCLQFFKGKMKEHWIMKEYGVKE--S-WTRV---FIHQD--PNNVWPLCLWKNSTKLLVIN 300 (339)
Q Consensus 232 -~~~~~~~~~l~~~-~G~-L~~v~~~~~~l~iW~l~~~~~~~--~-W~~~---~~i~~--~~~~~~~~~~~~~~i~~~~~ 300 (339)
.........+... +|+ |++.......+.+|.++..+... + .... ..+.. ..+..-+++.++|+.++...
T Consensus 150 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~ 229 (361)
T 3scy_A 150 ERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLIN 229 (361)
T ss_dssp TTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred cccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEc
Confidence 0000011234444 776 55544477899999998532100 1 2222 12222 22345567788887554443
Q ss_pred --CcEEEEEECCCCcEEEeE
Q 047931 301 --RKNLLVCDCNNEGSEDVA 318 (339)
Q Consensus 301 --~~~~~~yd~~t~~~~~v~ 318 (339)
+..+.+||+++++++.+.
T Consensus 230 ~~~~~v~v~~~~~g~~~~~~ 249 (361)
T 3scy_A 230 EIGGTVIAFRYADGMLDEIQ 249 (361)
T ss_dssp TTTCEEEEEEEETTEEEEEE
T ss_pred CCCCeEEEEEecCCceEEeE
Confidence 457999999988876553
No 89
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=82.07 E-value=20 Score=29.63 Aligned_cols=183 Identities=10% Similarity=0.045 Sum_probs=96.6
Q ss_pred eEEEccCCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEEe-c
Q 047931 104 LVCTTPKPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRV-L 181 (339)
Q Consensus 104 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~-~ 181 (339)
+++....+..+.++|..+++.......... ......+.+ ..+.+-+..-. .-.+.+|+.+++.-... .
T Consensus 111 ~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~l~~~~~-----dg~v~~~d~~~~~~~~~~~ 180 (337)
T 1gxr_A 111 TLIVGGEASTLSIWDLAAPTPRIKAELTSS-----APACYALAISPDSKVCFSCCS-----DGNIAVWDLHNQTLVRQFQ 180 (337)
T ss_dssp EEEEEESSSEEEEEECCCC--EEEEEEECS-----SSCEEEEEECTTSSEEEEEET-----TSCEEEEETTTTEEEEEEC
T ss_pred EEEEEcCCCcEEEEECCCCCcceeeecccC-----CCceEEEEECCCCCEEEEEeC-----CCcEEEEeCCCCceeeeee
Confidence 344434467888898887763222111111 001444555 33333333222 44688888877643322 1
Q ss_pred ccCCccCccCCCceEE--CCeEEEEEecCCCCeEEEEEECCCceeee-ecCCCCCCCCceeEEEEE-CCeEEEEEeCCCe
Q 047931 182 ASGYTRPLINVPGTLT--NGALHWRLQKHGGDFVLAAFDLVEERFKE-FPLPDASTSFRFFGTGVL-GDCLCLQFFKGKM 257 (339)
Q Consensus 182 ~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~~~~~~-i~lP~~~~~~~~~~l~~~-~G~L~~v~~~~~~ 257 (339)
..... ...+.+ +|.....+... ..|..+|+.+.+... +..+.. ...+... +|.+.++...+..
T Consensus 181 ~~~~~-----i~~~~~~~~~~~l~~~~~d---g~i~~~d~~~~~~~~~~~~~~~-----v~~~~~s~~~~~l~~~~~~~~ 247 (337)
T 1gxr_A 181 GHTDG-----ASCIDISNDGTKLWTGGLD---NTVRSWDLREGRQLQQHDFTSQ-----IFSLGYCPTGEWLAVGMESSN 247 (337)
T ss_dssp CCSSC-----EEEEEECTTSSEEEEEETT---SEEEEEETTTTEEEEEEECSSC-----EEEEEECTTSSEEEEEETTSC
T ss_pred cccCc-----eEEEEECCCCCEEEEEecC---CcEEEEECCCCceEeeecCCCc-----eEEEEECCCCCEEEEEcCCCc
Confidence 11110 112222 45554444443 488999998765433 332221 2233333 6777776777788
Q ss_pred EEEEEEcccCCCCCeEEEEEecC-CCCeeEEEEEeCCeEEEEE-CCcEEEEEECCCCcEEE
Q 047931 258 KEHWIMKEYGVKESWTRVFIHQD-PNNVWPLCLWKNSTKLLVI-NRKNLLVCDCNNEGSED 316 (339)
Q Consensus 258 l~iW~l~~~~~~~~W~~~~~i~~-~~~~~~~~~~~~~~i~~~~-~~~~~~~yd~~t~~~~~ 316 (339)
+.+|.++.. . ...+.. .-...-+++.++++.++.. .++.+..||+++++...
T Consensus 248 i~~~~~~~~---~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~ 301 (337)
T 1gxr_A 248 VEVLHVNKP---D----KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIF 301 (337)
T ss_dssp EEEEETTSS---C----EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred EEEEECCCC---C----eEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEE
Confidence 999988752 2 122322 2225667777777755544 46679999999988653
No 90
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=81.95 E-value=19 Score=29.07 Aligned_cols=182 Identities=11% Similarity=-0.079 Sum_probs=96.2
Q ss_pred CCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCC-CceEEecccCCccC
Q 047931 111 PKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRM-NSWRRVLASGYTRP 188 (339)
Q Consensus 111 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~-~~W~~~~~~~~~~~ 188 (339)
...++++|+.+++...+...... ..++.+ ..+.+-++. . ...+.+++..+ +..+.+.......
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~~~--------v~~~~~spdg~~l~~~-~-----~~~i~~~d~~~~~~~~~~~~~~~~~- 85 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTPEL--------FEAPNWSPDGKYLLLN-S-----EGLLYRLSLAGDPSPEKVDTGFATI- 85 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEESSC--------CEEEEECTTSSEEEEE-E-----TTEEEEEESSSCCSCEECCCTTCCC-
T ss_pred ceeEEEEeCCCCceeeeccCCcc--------eEeeEECCCCCEEEEE-c-----CCeEEEEeCCCCCCceEeccccccc-
Confidence 46899999999887766543322 344555 334443332 2 34788999888 7766653221100
Q ss_pred ccCCCceEECCeEEEEEecC-CCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCeEEE-EEeCCCeEEEEEEcc
Q 047931 189 LINVPGTLTNGALHWRLQKH-GGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDCLCL-QFFKGKMKEHWIMKE 265 (339)
Q Consensus 189 ~~~~~~v~~~G~lyw~~~~~-~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~L~~-v~~~~~~l~iW~l~~ 265 (339)
........-+|......... +....|..+|..+.+...+..... ...+... +|+..+ .......+.||.++.
T Consensus 86 ~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~spdg~~l~~~~~~~~~~~l~~~~~ 160 (297)
T 2ojh_A 86 CNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLP-----SYWHGWSPDGKSFTYCGIRDQVFDIYSMDI 160 (297)
T ss_dssp BCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSS-----EEEEEECTTSSEEEEEEEETTEEEEEEEET
T ss_pred cccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCC-----ccceEECCCCCEEEEEECCCCceEEEEEEC
Confidence 01111122356544444321 224578888888776555432221 1222333 666444 444677799999874
Q ss_pred cCCCCCeEEEEEecC-CCCeeEEEEEeCCeE-EEEEC-C--cEEEEEECCCCcEEEe
Q 047931 266 YGVKESWTRVFIHQD-PNNVWPLCLWKNSTK-LLVIN-R--KNLLVCDCNNEGSEDV 317 (339)
Q Consensus 266 ~~~~~~W~~~~~i~~-~~~~~~~~~~~~~~i-~~~~~-~--~~~~~yd~~t~~~~~v 317 (339)
.+ ... ..+.. .-...-+.+.++|+. ++... + .+++.++..+++.+.+
T Consensus 161 ~~--~~~---~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~ 212 (297)
T 2ojh_A 161 DS--GVE---TRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERI 212 (297)
T ss_dssp TT--CCE---EECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEEC
T ss_pred CC--Ccc---eEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEE
Confidence 22 222 12222 112445566677764 44432 2 2577777777776655
No 91
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=81.68 E-value=23 Score=29.94 Aligned_cols=200 Identities=7% Similarity=-0.026 Sum_probs=98.7
Q ss_pred EEEeeeCceEEEccCCCEEEEEcccccce-eecCCCCCCCCCCCCCCeeEEee-e--CCceEEEEEeeEeCCCcEEEEEE
Q 047931 96 RIVGSCNGLVCTTPKPKIFFVLNPLTRES-KRIPDVPFEPFPRSSDDLYGFGC-T--AEDCKFIKVSFGLKPNMSVAIFS 171 (339)
Q Consensus 96 ~~~~s~~GLl~~~~~~~~~~V~NP~T~~~-~~LP~~~~~~~~~~~~~~~~~g~-~--~~~ykvv~~~~~~~~~~~~~vys 171 (339)
.+.++.+|.+.+-+......++|..+++. ......... ....+.+ . .+.+-+.+-. .-.+.+|+
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~-------~v~~~~~~~~~~~~~l~s~s~-----dg~i~~wd 155 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSAN-------EIIYMYGHNEVNTEYFIWADN-----RGTIGFQS 155 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSS-------CEEEEECCC---CCEEEEEET-----TCCEEEEE
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCC-------CEEEEEcCCCCCCCEEEEEeC-----CCcEEEEE
Confidence 35566677776665566777788777762 222211111 1444554 3 4444433322 45688888
Q ss_pred eCCCceEEecccCCccCccCCCceE--ECCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCeE
Q 047931 172 LRMNSWRRVLASGYTRPLINVPGTL--TNGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDCL 248 (339)
Q Consensus 172 s~~~~W~~~~~~~~~~~~~~~~~v~--~~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~L 248 (339)
.+++.-.......... ....+. -+|.+...+..+ ..|..+|+.+.+.....+..... ..-..+.-. +|..
T Consensus 156 ~~~~~~~~~~~~~~~~---~i~~~~~~pdg~~lasg~~d---g~i~iwd~~~~~~~~~~~~~~h~-~~v~~l~fs~~g~~ 228 (343)
T 3lrv_A 156 YEDDSQYIVHSAKSDV---EYSSGVLHKDSLLLALYSPD---GILDVYNLSSPDQASSRFPVDEE-AKIKEVKFADNGYW 228 (343)
T ss_dssp SSSSCEEEEECCCSSC---CCCEEEECTTSCEEEEECTT---SCEEEEESSCTTSCCEECCCCTT-SCEEEEEECTTSSE
T ss_pred CCCCcEEEEEecCCCC---ceEEEEECCCCCEEEEEcCC---CEEEEEECCCCCCCccEEeccCC-CCEEEEEEeCCCCE
Confidence 8876553321111110 011222 245554443333 47889999887643112222111 122233333 6666
Q ss_pred EEEEeCCCeEEEEEEcccCCCCCeEEEEEec-CCCCeeEEEEEeCCeEEEEE-C-CcEEEEEEC--CCCcEEE
Q 047931 249 CLQFFKGKMKEHWIMKEYGVKESWTRVFIHQ-DPNNVWPLCLWKNSTKLLVI-N-RKNLLVCDC--NNEGSED 316 (339)
Q Consensus 249 ~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~-~~~~~~~~~~~~~~~i~~~~-~-~~~~~~yd~--~t~~~~~ 316 (339)
.+...++ .+.||.++.......... +... .+.+...+++.++|+.++.. . +..+.+|+. .++.|+.
T Consensus 229 l~s~~~~-~v~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~ 299 (343)
T 3lrv_A 229 MVVECDQ-TVVCFDLRKDVGTLAYPT-YTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK 299 (343)
T ss_dssp EEEEESS-BEEEEETTSSTTCBSSCC-CBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE
T ss_pred EEEEeCC-eEEEEEcCCCCcceeecc-cccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe
Confidence 5555544 999999986321111100 0000 01111247777888777663 3 556777776 4555765
No 92
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=81.61 E-value=25 Score=30.40 Aligned_cols=196 Identities=7% Similarity=-0.028 Sum_probs=101.5
Q ss_pred eEEEccCCCEEEEEccccccee-ecC-CCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEEe
Q 047931 104 LVCTTPKPKIFFVLNPLTRESK-RIP-DVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRV 180 (339)
Q Consensus 104 Ll~~~~~~~~~~V~NP~T~~~~-~LP-~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~ 180 (339)
+++....+..+.|+|..+++.. .+. ..... ....+.+ ..+.+-+..-. ...+.+|+.+++.-...
T Consensus 146 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-------~v~~~~~~~~~~~l~~~~~-----d~~i~iwd~~~~~~~~~ 213 (402)
T 2aq5_A 146 VLLSAGCDNVILVWDVGTGAAVLTLGPDVHPD-------TIYSVDWSRDGALICTSCR-----DKRVRVIEPRKGTVVAE 213 (402)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECTTTCCS-------CEEEEEECTTSSCEEEEET-----TSEEEEEETTTTEEEEE
T ss_pred EEEEEcCCCEEEEEECCCCCccEEEecCCCCC-------ceEEEEECCCCCEEEEEec-----CCcEEEEeCCCCceeee
Confidence 4444445678999998887653 221 11111 1445555 33444333322 45788898887643222
Q ss_pred cccCCccCccCCCceE--ECCeEEEEEecCCCCeEEEEEECCCcee--eeecCCCCCCCCceeEEEEE-CCeEEEEEe-C
Q 047931 181 LASGYTRPLINVPGTL--TNGALHWRLQKHGGDFVLAAFDLVEERF--KEFPLPDASTSFRFFGTGVL-GDCLCLQFF-K 254 (339)
Q Consensus 181 ~~~~~~~~~~~~~~v~--~~G~lyw~~~~~~~~~~il~fD~~~~~~--~~i~lP~~~~~~~~~~l~~~-~G~L~~v~~-~ 254 (339)
-...... .....+. -+|.+...+........|..+|+.+.+- ....++... ....+... +|+..++.. .
T Consensus 214 ~~~~~~~--~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~---~v~~~~~s~~~~~l~~~g~~ 288 (402)
T 2aq5_A 214 KDRPHEG--TRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSS---GVLLPFFDPDTNIVYLCGKG 288 (402)
T ss_dssp EECSSCS--SSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCS---SCEEEEEETTTTEEEEEETT
T ss_pred eccCCCC--CcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCC---ceeEEEEcCCCCEEEEEEcC
Confidence 1001100 0011121 2455544442111236899999987542 222332222 11223333 666555555 7
Q ss_pred CCeEEEEEEcccCCCCCeEE-EEEecCCCCeeEEEEEeCCeEEEEECCcEEEEEECCCCcEEEeEEe
Q 047931 255 GKMKEHWIMKEYGVKESWTR-VFIHQDPNNVWPLCLWKNSTKLLVINRKNLLVCDCNNEGSEDVAVA 320 (339)
Q Consensus 255 ~~~l~iW~l~~~~~~~~W~~-~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~yd~~t~~~~~v~~~ 320 (339)
+..+.+|.++.. ..+.. .......-...-+++.+++.+++ ..++.+..|++.+++.+.+.+.
T Consensus 289 dg~i~i~d~~~~---~~~~~~l~~~~~~~~v~~~~~sp~~~~~~-s~~~~~~~~~l~~~~~~~i~~~ 351 (402)
T 2aq5_A 289 DSSIRYFEITSE---APFLHYLSMFSSKESQRGMGYMPKRGLEV-NKCEIARFYKLHERKCEPIAMT 351 (402)
T ss_dssp CSCEEEEEECSS---TTCEEEEEEECCSSCCSEEEECCGGGSCG-GGTEEEEEEEEETTEEEEEEEE
T ss_pred CCeEEEEEecCC---CcceEeecccccCCcccceEEecccccce-ecceeEEEEEcCCCcEEEEEEE
Confidence 889999999862 22222 23333211255667777776554 3455789999999998887653
No 93
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=81.61 E-value=49 Score=33.72 Aligned_cols=180 Identities=13% Similarity=0.039 Sum_probs=96.0
Q ss_pred cCCCEEEEEccccccee-ecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEEe-cccCC
Q 047931 109 PKPKIFFVLNPLTRESK-RIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRV-LASGY 185 (339)
Q Consensus 109 ~~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~-~~~~~ 185 (339)
..++.+.|+|..|++.. .+..... ...++.+ ..+.+-+.+-. ...+.|++..++.-... .....
T Consensus 634 ~~d~~i~vw~~~~~~~~~~~~~h~~--------~v~~~~~s~~~~~l~s~~~-----d~~v~vwd~~~~~~~~~~~~~~~ 700 (1249)
T 3sfz_A 634 GADKTLQVFKAETGEKLLDIKAHED--------EVLCCAFSSDDSYIATCSA-----DKKVKIWDSATGKLVHTYDEHSE 700 (1249)
T ss_dssp ETTSCEEEEETTTCCEEEEECCCSS--------CEEEEEECTTSSEEEEEET-----TSEEEEEETTTCCEEEEEECCSS
T ss_pred eCCCeEEEEECCCCCEEEEeccCCC--------CEEEEEEecCCCEEEEEeC-----CCeEEEEECCCCceEEEEcCCCC
Confidence 35678999999988753 3332111 1555666 34444433322 45688999887654322 11110
Q ss_pred ccCccCCCceEE----CCeEEEEEecCCCCeEEEEEECCCceeeee-cCCCCCCCCceeEEEEE-CCeEEEEEeCCCeEE
Q 047931 186 TRPLINVPGTLT----NGALHWRLQKHGGDFVLAAFDLVEERFKEF-PLPDASTSFRFFGTGVL-GDCLCLQFFKGKMKE 259 (339)
Q Consensus 186 ~~~~~~~~~v~~----~G~lyw~~~~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~l~~~-~G~L~~v~~~~~~l~ 259 (339)
. ...+.+ ++.+...+.. ...|..+|+.+.+.... ..... ....+... +|.+.+....+..+.
T Consensus 701 ~-----v~~~~~~~~~~~~~l~sg~~---d~~v~vwd~~~~~~~~~~~~h~~----~v~~~~~sp~~~~l~s~s~dg~v~ 768 (1249)
T 3sfz_A 701 Q-----VNCCHFTNKSNHLLLATGSN---DFFLKLWDLNQKECRNTMFGHTN----SVNHCRFSPDDELLASCSADGTLR 768 (1249)
T ss_dssp C-----EEEEEECSSSSCCEEEEEET---TSCEEEEETTSSSEEEEECCCSS----CEEEEEECSSTTEEEEEESSSEEE
T ss_pred c-----EEEEEEecCCCceEEEEEeC---CCeEEEEECCCcchhheecCCCC----CEEEEEEecCCCEEEEEECCCeEE
Confidence 0 011222 1222222222 24688889887664332 21111 12223333 777777777888999
Q ss_pred EEEEcccCCCCCeEEEEEecC----------C--CCeeEEEEEeCCeEEEEECCcEEEEEECCCCcEEEe
Q 047931 260 HWIMKEYGVKESWTRVFIHQD----------P--NNVWPLCLWKNSTKLLVINRKNLLVCDCNNEGSEDV 317 (339)
Q Consensus 260 iW~l~~~~~~~~W~~~~~i~~----------~--~~~~~~~~~~~~~i~~~~~~~~~~~yd~~t~~~~~v 317 (339)
+|.+.... -........ . .....+++.++|+.++...+..+..||..+++....
T Consensus 769 vwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~ 834 (1249)
T 3sfz_A 769 LWDVRSAN----ERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAE 834 (1249)
T ss_dssp EEEGGGTE----EEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEE
T ss_pred EEeCCCCc----ccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeE
Confidence 99988521 111111110 0 013445566788777777677899999999886544
No 94
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=81.24 E-value=41 Score=32.50 Aligned_cols=196 Identities=10% Similarity=-0.071 Sum_probs=99.1
Q ss_pred CceEEEccCCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEeeeCCceEEEEEeeEeCCCcEEEEEEeCCCceEEec
Q 047931 102 NGLVCTTPKPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGCTAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRVL 181 (339)
Q Consensus 102 ~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~ 181 (339)
+|-|-+......++.+||.|+++..++..... .....++....+. + +.+. . ...+..|+..++.|+...
T Consensus 417 ~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~-----~~~v~~i~~d~~g-~-lwig-t---~~Gl~~~~~~~~~~~~~~ 485 (781)
T 3v9f_A 417 EGNLWFGTYLGNISYYNTRLKKFQIIELEKNE-----LLDVRVFYEDKNK-K-IWIG-T---HAGVFVIDLASKKVIHHY 485 (781)
T ss_dssp TSCEEEEETTEEEEEECSSSCEEEECCSTTTC-----CCCEEEEEECTTS-E-EEEE-E---TTEEEEEESSSSSCCEEE
T ss_pred CCCEEEEeccCCEEEEcCCCCcEEEeccCCCC-----CCeEEEEEECCCC-C-EEEE-E---CCceEEEeCCCCeEEecc
Confidence 34443333335677788888777766532111 0012222211111 1 1221 1 246788888888887664
Q ss_pred ccCC-ccCccCCCceEE--CCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCeEEEEEeCCCe
Q 047931 182 ASGY-TRPLINVPGTLT--NGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDCLCLQFFKGKM 257 (339)
Q Consensus 182 ~~~~-~~~~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~L~~v~~~~~~ 257 (339)
..+. ........++.. +|. .|++..+ ..+..||..++++..+..+..........+.+. +|.|++.+. ..
T Consensus 486 ~~~~~~~~~~~i~~i~~d~~g~-lWigt~~---~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~--~G 559 (781)
T 3v9f_A 486 DTSNSQLLENFVRSIAQDSEGR-FWIGTFG---GGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG--EG 559 (781)
T ss_dssp CTTTSSCSCSCEEEEEECTTCC-EEEEESS---SCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET--TE
T ss_pred cCcccccccceeEEEEEcCCCC-EEEEEcC---CCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC--CC
Confidence 3221 100001112322 355 4666652 268999999999988765443322223344443 788877654 22
Q ss_pred EEEEEEcccCCCCCeEEEEEecCCC---CeeEEEEEeCCeEEEEECCcEEEEEECCCCcEEEeEE
Q 047931 258 KEHWIMKEYGVKESWTRVFIHQDPN---NVWPLCLWKNSTKLLVINRKNLLVCDCNNEGSEDVAV 319 (339)
Q Consensus 258 l~iW~l~~~~~~~~W~~~~~i~~~~---~~~~~~~~~~~~i~~~~~~~~~~~yd~~t~~~~~v~~ 319 (339)
+ |..++.. +.++.. ++....+ .+.-+....+|.+.+... ..+..||+++++++.+..
T Consensus 560 l-v~~~d~~--~~~~~~-~~~~~gl~~~~i~~i~~d~~g~lW~~t~-~Gl~~~~~~~~~~~~~~~ 619 (781)
T 3v9f_A 560 L-VCFPSAR--NFDYQV-FQRKEGLPNTHIRAISEDKNGNIWASTN-TGISCYITSKKCFYTYDH 619 (781)
T ss_dssp E-EEESCTT--TCCCEE-ECGGGTCSCCCCCEEEECSSSCEEEECS-SCEEEEETTTTEEEEECG
T ss_pred c-eEEECCC--CCcEEE-ccccCCCCCceEEEEEECCCCCEEEEcC-CceEEEECCCCceEEecc
Confidence 2 1233321 233332 2221111 133344445667777654 459999999999887743
No 95
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=81.20 E-value=26 Score=30.21 Aligned_cols=181 Identities=9% Similarity=0.043 Sum_probs=88.1
Q ss_pred CCCEEEEEccccccee-ecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCC--CceEEecccCC
Q 047931 110 KPKIFFVLNPLTRESK-RIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRM--NSWRRVLASGY 185 (339)
Q Consensus 110 ~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~--~~W~~~~~~~~ 185 (339)
.+..+.|+|..+++.. .+..... ......+.+ ..+.+-+..-. .-.+.+|+..+ ...+.+..+..
T Consensus 43 ~d~~v~iw~~~~~~~~~~~~~~~~------~~~v~~~~~s~~~~~l~~~~~-----dg~v~vw~~~~~~~~~~~~~~~~~ 111 (416)
T 2pm9_A 43 TDSSLELWSLLAADSEKPIASLQV------DSKFNDLDWSHNNKIIAGALD-----NGSLELYSTNEANNAINSMARFSN 111 (416)
T ss_dssp CCCCCEEEESSSGGGCSCSCCCCC------SSCEEEEEECSSSSCEEEEES-----SSCEEEECCSSTTSCCCEEEECCC
T ss_pred CCCeEEEEEccCCCCCcEEEEEec------CCceEEEEECCCCCeEEEEcc-----CCeEEEeecccccccccchhhccC
Confidence 3567889998887632 1111110 111455555 34444433322 34678888776 12222211111
Q ss_pred ccCccCCCceEEC---CeEEEEEecCCCCeEEEEEECCCcee-----eeecCCCCC-CCCceeEEEEE-C-CeEEEEEeC
Q 047931 186 TRPLINVPGTLTN---GALHWRLQKHGGDFVLAAFDLVEERF-----KEFPLPDAS-TSFRFFGTGVL-G-DCLCLQFFK 254 (339)
Q Consensus 186 ~~~~~~~~~v~~~---G~lyw~~~~~~~~~~il~fD~~~~~~-----~~i~lP~~~-~~~~~~~l~~~-~-G~L~~v~~~ 254 (339)
.. ..-..+.++ |.+...+..+ ..|..+|+.+.+- ..+.+.... .......+... + +.+.+....
T Consensus 112 h~--~~v~~~~~~~~~~~~l~s~~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 186 (416)
T 2pm9_A 112 HS--SSVKTVKFNAKQDNVLASGGNN---GEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGS 186 (416)
T ss_dssp SS--SCCCEEEECSSSTTBEEEECSS---SCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESS
T ss_pred Cc--cceEEEEEcCCCCCEEEEEcCC---CeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcC
Confidence 10 111223332 4444333332 4788889887651 111110000 00011233333 3 567766668
Q ss_pred CCeEEEEEEcccCCCCCeEEEEEecC-------CCCeeEEEEEeCC-eEEEEE-CCc---EEEEEECCCC
Q 047931 255 GKMKEHWIMKEYGVKESWTRVFIHQD-------PNNVWPLCLWKNS-TKLLVI-NRK---NLLVCDCNNE 312 (339)
Q Consensus 255 ~~~l~iW~l~~~~~~~~W~~~~~i~~-------~~~~~~~~~~~~~-~i~~~~-~~~---~~~~yd~~t~ 312 (339)
+..+.+|.++. . .....+.. .-.+.-+++.+++ .+++.. .+. .+..||+++.
T Consensus 187 dg~v~iwd~~~----~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~ 250 (416)
T 2pm9_A 187 SNFASIWDLKA----K--KEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNA 250 (416)
T ss_dssp SSCEEEEETTT----T--EEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTST
T ss_pred CCCEEEEECCC----C--CcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCC
Confidence 88899999875 2 12233322 1125566777776 455544 444 7999999885
No 96
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=81.13 E-value=26 Score=30.15 Aligned_cols=186 Identities=6% Similarity=-0.035 Sum_probs=93.5
Q ss_pred eCceEEEccCCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEE
Q 047931 101 CNGLVCTTPKPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRR 179 (339)
Q Consensus 101 ~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~ 179 (339)
.+|.++.......+.+++.-+++....-..... ....+.+ ..+.+-+..- ....+.+|+.+++.-..
T Consensus 216 ~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~-------~i~~~~~~~~~~~l~~~~-----~d~~i~i~d~~~~~~~~ 283 (425)
T 1r5m_A 216 DDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHG-------PISVLEFNDTNKLLLSAS-----DDGTLRIWHGGNGNSQN 283 (425)
T ss_dssp ETTEEEEECGGGCEEEEETTCSSCSEEECCCSS-------CEEEEEEETTTTEEEEEE-----TTSCEEEECSSSBSCSE
T ss_pred CCCEEEEEcCCCeEEEEEcCCCceeeeeccCCC-------ceEEEEECCCCCEEEEEc-----CCCEEEEEECCCCccce
Confidence 355655554567888898877653322111111 1445555 3344333322 14467788876643221
Q ss_pred -ecccCCccCccCCCce--EECCeEEEEEecCCCCeEEEEEECCCceeee-ecCCCCCCCCceeEEEEE-CCeEEEEEeC
Q 047931 180 -VLASGYTRPLINVPGT--LTNGALHWRLQKHGGDFVLAAFDLVEERFKE-FPLPDASTSFRFFGTGVL-GDCLCLQFFK 254 (339)
Q Consensus 180 -~~~~~~~~~~~~~~~v--~~~G~lyw~~~~~~~~~~il~fD~~~~~~~~-i~lP~~~~~~~~~~l~~~-~G~L~~v~~~ 254 (339)
....... ...+ .-+| ....+..+ ..|..+|+.+.+... +..... ....+... +|.+.++...
T Consensus 284 ~~~~~~~~-----i~~~~~~~~~-~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~----~i~~~~~s~~~~~l~~~~~ 350 (425)
T 1r5m_A 284 CFYGHSQS-----IVSASWVGDD-KVISCSMD---GSVRLWSLKQNTLLALSIVDGV----PIFAGRISQDGQKYAVAFM 350 (425)
T ss_dssp EECCCSSC-----EEEEEEETTT-EEEEEETT---SEEEEEETTTTEEEEEEECTTC----CEEEEEECTTSSEEEEEET
T ss_pred EecCCCcc-----EEEEEECCCC-EEEEEeCC---CcEEEEECCCCcEeEecccCCc----cEEEEEEcCCCCEEEEEEC
Confidence 1111111 0112 2245 33333332 488999998766433 232111 12233333 6777777777
Q ss_pred CCeEEEEEEcccCC---------CCCe-----EEEEEecCC-C--CeeEEEEEeCCeEEE-EECCcEEEEEECCC
Q 047931 255 GKMKEHWIMKEYGV---------KESW-----TRVFIHQDP-N--NVWPLCLWKNSTKLL-VINRKNLLVCDCNN 311 (339)
Q Consensus 255 ~~~l~iW~l~~~~~---------~~~W-----~~~~~i~~~-~--~~~~~~~~~~~~i~~-~~~~~~~~~yd~~t 311 (339)
+..+.||.++.... .+.| ..+..+... - .+.-+++.+++..++ ...++.+.+||++.
T Consensus 351 dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~g 425 (425)
T 1r5m_A 351 DGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIPG 425 (425)
T ss_dssp TSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECCC
T ss_pred CCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeecC
Confidence 88999999985320 0111 133444432 1 356667777776554 44555689998763
No 97
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=81.09 E-value=38 Score=32.06 Aligned_cols=95 Identities=13% Similarity=0.154 Sum_probs=60.8
Q ss_pred eEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecCCCCeeEEEEE
Q 047931 212 FVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQDPNNVWPLCLW 290 (339)
Q Consensus 212 ~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~ 290 (339)
..|..+|+.+.+....- .... .....+... +|++.+....+..+.||.+... ..+.++...-.+.-+++.
T Consensus 541 ~~v~vwd~~~~~~~~~~-~~h~--~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~------~~~~~~~~~~~v~~~~~s 611 (694)
T 3dm0_A 541 KTVKVWNLSNCKLRSTL-AGHT--GYVSTVAVSPDGSLCASGGKDGVVLLWDLAEG------KKLYSLEANSVIHALCFS 611 (694)
T ss_dssp SCEEEEETTTCCEEEEE-CCCS--SCEEEEEECTTSSEEEEEETTSBCEEEETTTT------EEEECCBCSSCEEEEEEC
T ss_pred CeEEEEECCCCcEEEEE-cCCC--CCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC------ceEEEecCCCcEEEEEEc
Confidence 46888898876554321 1111 112234443 7888777778889999998751 123333332225667788
Q ss_pred eCCeEEEEECCcEEEEEECCCCcEE
Q 047931 291 KNSTKLLVINRKNLLVCDCNNEGSE 315 (339)
Q Consensus 291 ~~~~i~~~~~~~~~~~yd~~t~~~~ 315 (339)
+++.++....+..+.+||+++++..
T Consensus 612 p~~~~l~~~~~~~i~iwd~~~~~~~ 636 (694)
T 3dm0_A 612 PNRYWLCAATEHGIKIWDLESKSIV 636 (694)
T ss_dssp SSSSEEEEEETTEEEEEETTTTEEE
T ss_pred CCCcEEEEEcCCCEEEEECCCCCCh
Confidence 8888777777778999999998754
No 98
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=80.95 E-value=24 Score=29.63 Aligned_cols=189 Identities=8% Similarity=-0.046 Sum_probs=89.0
Q ss_pred EEEccCCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEEeccc
Q 047931 105 VCTTPKPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRVLAS 183 (339)
Q Consensus 105 l~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~ 183 (339)
++....+..+.++|..+++...+...... ...+.+ .+.+-+.+... .....+.+|+.+++.-...-..
T Consensus 101 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~--------v~~~~~~~~~~~~~l~~~---~~dg~i~vwd~~~~~~~~~~~~ 169 (368)
T 3mmy_A 101 VFTASCDKTAKMWDLSSNQAIQIAQHDAP--------VKTIHWIKAPNYSCVMTG---SWDKTLKFWDTRSSNPMMVLQL 169 (368)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECSSC--------EEEEEEEECSSCEEEEEE---ETTSEEEEECSSCSSCSEEEEC
T ss_pred EEEEcCCCcEEEEEcCCCCceeeccccCc--------eEEEEEEeCCCCCEEEEc---cCCCcEEEEECCCCcEEEEEec
Confidence 33333467888888888876654332222 444444 22232322222 1245678888776532111011
Q ss_pred CCccCccCCCceEECCeEEEEEecCCCCeEEEEEECCCcee--eeecCCCCCCCCceeEEEEE-CC----eEEEEEeCCC
Q 047931 184 GYTRPLINVPGTLTNGALHWRLQKHGGDFVLAAFDLVEERF--KEFPLPDASTSFRFFGTGVL-GD----CLCLQFFKGK 256 (339)
Q Consensus 184 ~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~~~~--~~i~lP~~~~~~~~~~l~~~-~G----~L~~v~~~~~ 256 (339)
+.. ...+...+.....+... ..+..+|+.+..- ..+..+.... ...+... ++ ...++...+.
T Consensus 170 ~~~-----~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~dg 238 (368)
T 3mmy_A 170 PER-----CYCADVIYPMAVVATAE---RGLIVYQLENQPSEFRRIESPLKHQ---HRCVAIFKDKQNKPTGFALGSIEG 238 (368)
T ss_dssp SSC-----EEEEEEETTEEEEEEGG---GCEEEEECSSSCEEEEECCCSCSSC---EEEEEEEECTTSCEEEEEEEETTS
T ss_pred CCC-----ceEEEecCCeeEEEeCC---CcEEEEEeccccchhhhccccccCC---CceEEEcccCCCCCCeEEEecCCC
Confidence 110 11122222233333332 3678888876543 3333322221 1122211 22 2244444788
Q ss_pred eEEEEEEcccCC-CCCeEEE-EEecC-C-------CCeeEEEEEeCCeEEEEE-CCcEEEEEECCCCcEE
Q 047931 257 MKEHWIMKEYGV-KESWTRV-FIHQD-P-------NNVWPLCLWKNSTKLLVI-NRKNLLVCDCNNEGSE 315 (339)
Q Consensus 257 ~l~iW~l~~~~~-~~~W~~~-~~i~~-~-------~~~~~~~~~~~~~i~~~~-~~~~~~~yd~~t~~~~ 315 (339)
.+.+|.++.... ....... +.-.. . ..+.-+++.+++..++.. .++.+.+||.++++..
T Consensus 239 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~ 308 (368)
T 3mmy_A 239 RVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKL 308 (368)
T ss_dssp EEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEE
T ss_pred cEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEE
Confidence 999999885321 1112211 01000 0 024556677777655544 4567999999987643
No 99
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=80.88 E-value=23 Score=29.34 Aligned_cols=176 Identities=8% Similarity=-0.034 Sum_probs=90.4
Q ss_pred CCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEEe-cccCCcc
Q 047931 110 KPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRV-LASGYTR 187 (339)
Q Consensus 110 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~-~~~~~~~ 187 (339)
.++.+.|++..+++....-..... ....+.+ ..+.+-+.+- ....+.+|+.+++.-... .......
T Consensus 43 ~dg~i~iw~~~~~~~~~~~~~h~~-------~v~~~~~~~~~~~l~s~~-----~d~~i~vwd~~~~~~~~~~~~~~~~v 110 (312)
T 4ery_A 43 ADKLIKIWGAYDGKFEKTISGHKL-------GISDVAWSSDSNLLVSAS-----DDKTLKIWDVSSGKCLKTLKGHSNYV 110 (312)
T ss_dssp TTSCEEEEETTTCCEEEEECCCSS-------CEEEEEECTTSSEEEEEE-----TTSEEEEEETTTCCEEEEEECCSSCE
T ss_pred CCCeEEEEeCCCcccchhhccCCC-------ceEEEEEcCCCCEEEEEC-----CCCEEEEEECCCCcEEEEEcCCCCCE
Confidence 456777888877765433221111 1444555 3333333322 245688888877643211 1100000
Q ss_pred CccCCCceEE--CCeEEEEEecCCCCeEEEEEECCCceee-eecCCCCCCCCceeEEEEE-CCeEEEEEeCCCeEEEEEE
Q 047931 188 PLINVPGTLT--NGALHWRLQKHGGDFVLAAFDLVEERFK-EFPLPDASTSFRFFGTGVL-GDCLCLQFFKGKMKEHWIM 263 (339)
Q Consensus 188 ~~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~~~~~-~i~lP~~~~~~~~~~l~~~-~G~L~~v~~~~~~l~iW~l 263 (339)
..+.+ +|.+...+..+ ..|..+|+.+.+.. .+.. ... ....+... +|.+.+....+..+.+|.+
T Consensus 111 -----~~~~~~~~~~~l~s~~~d---~~i~iwd~~~~~~~~~~~~--~~~--~v~~~~~~~~~~~l~~~~~d~~i~~wd~ 178 (312)
T 4ery_A 111 -----FCCNFNPQSNLIVSGSFD---ESVRIWDVKTGKCLKTLPA--HSD--PVSAVHFNRDGSLIVSSSYDGLCRIWDT 178 (312)
T ss_dssp -----EEEEECSSSSEEEEEETT---SCEEEEETTTCCEEEEECC--CSS--CEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred -----EEEEEcCCCCEEEEEeCC---CcEEEEECCCCEEEEEecC--CCC--cEEEEEEcCCCCEEEEEeCCCcEEEEEC
Confidence 01111 23333333322 46888998876533 2322 111 11223333 7777777778889999998
Q ss_pred cccCCCCCeEEEEEecC--CCCeeEEEEEeCCeEEEE-ECCcEEEEEECCCCcEE
Q 047931 264 KEYGVKESWTRVFIHQD--PNNVWPLCLWKNSTKLLV-INRKNLLVCDCNNEGSE 315 (339)
Q Consensus 264 ~~~~~~~~W~~~~~i~~--~~~~~~~~~~~~~~i~~~-~~~~~~~~yd~~t~~~~ 315 (339)
... + ....+.. .-....+++.++++.++. ..++.+..||+++++..
T Consensus 179 ~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 227 (312)
T 4ery_A 179 ASG----Q--CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 227 (312)
T ss_dssp TTC----C--EEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEE
T ss_pred CCC----c--eeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEE
Confidence 751 1 2233322 112455677778765554 44667999999988754
No 100
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=80.86 E-value=21 Score=29.06 Aligned_cols=187 Identities=11% Similarity=0.108 Sum_probs=96.5
Q ss_pred eeCceEEEccC--CCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCc
Q 047931 100 SCNGLVCTTPK--PKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNS 176 (339)
Q Consensus 100 s~~GLl~~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~ 176 (339)
..+|.+.+... ...+.++|+-.+....+...... ...++.+ ..+. +.... .....+.+|+.....
T Consensus 86 ~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~~-------~~~~i~~~~~g~--l~v~~---~~~~~i~~~~~~g~~ 153 (286)
T 1q7f_A 86 RNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATILQ-------HPRGVTVDNKGR--IIVVE---CKVMRVIIFDQNGNV 153 (286)
T ss_dssp TTTTEEEEEECGGGCEEEEECTTSCEEEEECTTTCS-------CEEEEEECTTSC--EEEEE---TTTTEEEEECTTSCE
T ss_pred cCCCeEEEEcCCCCCEEEEECCCCcEEEEecCccCC-------CceEEEEeCCCC--EEEEE---CCCCEEEEEcCCCCE
Confidence 34666655542 56888898655444444332211 1334444 2222 22221 123467777754433
Q ss_pred eEEecccCCccCccCCCceEE--CCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCeEEEEEe
Q 047931 177 WRRVLASGYTRPLINVPGTLT--NGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDCLCLQFF 253 (339)
Q Consensus 177 W~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~L~~v~~ 253 (339)
-+...... . .....++.+ +|.+|...... ..|..||...+....+..+.... ....++.. +|.|++...
T Consensus 154 ~~~~~~~~-~--~~~p~~i~~~~~g~l~v~~~~~---~~i~~~~~~g~~~~~~~~~g~~~--~p~~i~~d~~G~l~v~~~ 225 (286)
T 1q7f_A 154 LHKFGCSK-H--LEFPNGVVVNDKQEIFISDNRA---HCVKVFNYEGQYLRQIGGEGITN--YPIGVGINSNGEILIADN 225 (286)
T ss_dssp EEEEECTT-T--CSSEEEEEECSSSEEEEEEGGG---TEEEEEETTCCEEEEESCTTTSC--SEEEEEECTTCCEEEEEC
T ss_pred EEEeCCCC-c--cCCcEEEEECCCCCEEEEECCC---CEEEEEcCCCCEEEEEccCCccC--CCcEEEECCCCCEEEEeC
Confidence 33332111 0 011123444 47876654432 48999999877666665432221 22345544 789988887
Q ss_pred CCC-eEEEEEEcccCCCCCeEEEEEecCCC-CeeEEEEEeCCeEEEEECCcEEEEEECCC
Q 047931 254 KGK-MKEHWIMKEYGVKESWTRVFIHQDPN-NVWPLCLWKNSTKLLVINRKNLLVCDCNN 311 (339)
Q Consensus 254 ~~~-~l~iW~l~~~~~~~~W~~~~~i~~~~-~~~~~~~~~~~~i~~~~~~~~~~~yd~~t 311 (339)
... .+.+|..+ .+-.......... ...-+++.++|++++...+..+.+|+...
T Consensus 226 ~~~~~i~~~~~~-----g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 226 HNNFNLTIFTQD-----GQLISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp SSSCEEEEECTT-----SCEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred CCCEEEEEECCC-----CCEEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEccc
Confidence 554 88888532 2222222222221 13446677788887776666788888754
No 101
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=80.82 E-value=23 Score=29.43 Aligned_cols=193 Identities=7% Similarity=-0.003 Sum_probs=94.5
Q ss_pred eEEEccCCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEEecc
Q 047931 104 LVCTTPKPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRVLA 182 (339)
Q Consensus 104 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~ 182 (339)
|+........++.++| +++...+...... ..++.+ ..+. ++... .....+..|+.. +..+.+..
T Consensus 59 l~~~d~~~~~i~~~~~-~g~~~~~~~~~~~--------~~gl~~d~dG~--l~v~~---~~~~~v~~~~~~-g~~~~~~~ 123 (305)
T 3dr2_A 59 LVWSDLVGRRVLGWRE-DGTVDVLLDATAF--------TNGNAVDAQQR--LVHCE---HGRRAITRSDAD-GQAHLLVG 123 (305)
T ss_dssp EEEEETTTTEEEEEET-TSCEEEEEESCSC--------EEEEEECTTSC--EEEEE---TTTTEEEEECTT-SCEEEEEC
T ss_pred EEEEECCCCEEEEEeC-CCCEEEEeCCCCc--------cceeeECCCCC--EEEEE---CCCCEEEEECCC-CCEEEEEe
Confidence 3444334567888888 6655444322221 344544 2222 22221 113456667664 55555422
Q ss_pred cCCccCccCCCce--EECCeEEEEEe----c----C------CCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE-C
Q 047931 183 SGYTRPLINVPGT--LTNGALHWRLQ----K----H------GGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-G 245 (339)
Q Consensus 183 ~~~~~~~~~~~~v--~~~G~lyw~~~----~----~------~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~ 245 (339)
............+ .-+|.+|+... . . .....|..+|.++.++..+. ... ..-.++.. +
T Consensus 124 ~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~---~~~--~p~gl~~spd 198 (305)
T 3dr2_A 124 RYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA---DLD--HPNGLAFSPD 198 (305)
T ss_dssp EETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE---EES--SEEEEEECTT
T ss_pred ccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe---cCC--CCcceEEcCC
Confidence 1111000011122 23677766311 0 0 01357999999888777654 111 11234444 6
Q ss_pred Ce-EEEEEeC-----CCeEEEEEEcccCCCCCeEEEEEecC-CCC-eeEEEEEeCCeEEEEECCcEEEEEECCCCcEEEe
Q 047931 246 DC-LCLQFFK-----GKMKEHWIMKEYGVKESWTRVFIHQD-PNN-VWPLCLWKNSTKLLVINRKNLLVCDCNNEGSEDV 317 (339)
Q Consensus 246 G~-L~~v~~~-----~~~l~iW~l~~~~~~~~W~~~~~i~~-~~~-~~~~~~~~~~~i~~~~~~~~~~~yd~~t~~~~~v 317 (339)
|+ |+++... ...+.+|.++.. . ......+.. ..+ ..-+++..+|.+++.. ...+..||++++.+..+
T Consensus 199 g~~lyv~~~~~~~~~~~~i~~~~~~~~---~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~gv~~~~~~g~~~~~~ 273 (305)
T 3dr2_A 199 EQTLYVSQTPEQGHGSVEITAFAWRDG---A-LHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GTGVCVFDSDGQLLGHI 273 (305)
T ss_dssp SSEEEEEECCC---CCCEEEEEEEETT---E-EEEEEEEECCSSSCCCSEEECTTSCEEECC-SSEEEEECTTSCEEEEE
T ss_pred CCEEEEEecCCcCCCCCEEEEEEecCC---C-ccCCeEEEECCCCCCCeEEECCCCCEEEec-CCcEEEECCCCCEEEEE
Confidence 65 6665553 255666655531 2 222222211 110 2235566677866555 45699999988888888
Q ss_pred EEeC
Q 047931 318 AVAD 321 (339)
Q Consensus 318 ~~~~ 321 (339)
....
T Consensus 274 ~~~~ 277 (305)
T 3dr2_A 274 PTPG 277 (305)
T ss_dssp ECSS
T ss_pred ECCC
Confidence 6643
No 102
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=80.75 E-value=24 Score=29.55 Aligned_cols=94 Identities=11% Similarity=0.046 Sum_probs=58.2
Q ss_pred eEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecCCCCeeEEEEE
Q 047931 212 FVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQDPNNVWPLCLW 290 (339)
Q Consensus 212 ~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~ 290 (339)
..|..+|+.+.+....-. ... .....+... +|++.+....+..+.||.+... ....++...-.+.-+++.
T Consensus 176 ~~i~~wd~~~~~~~~~~~-~h~--~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~------~~~~~~~~~~~v~~~~~s 246 (319)
T 3frx_A 176 KMVKAWNLNQFQIEADFI-GHN--SNINTLTASPDGTLIASAGKDGEIMLWNLAAK------KAMYTLSAQDEVFSLAFS 246 (319)
T ss_dssp SCEEEEETTTTEEEEEEC-CCC--SCEEEEEECTTSSEEEEEETTCEEEEEETTTT------EEEEEEECCSCEEEEEEC
T ss_pred CEEEEEECCcchhheeec-CCC--CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC------cEEEEecCCCcEEEEEEc
Confidence 468888888765433211 111 112234433 7787777778899999998751 233444432235677888
Q ss_pred eCCeEEEEECCcEEEEEECCCCcE
Q 047931 291 KNSTKLLVINRKNLLVCDCNNEGS 314 (339)
Q Consensus 291 ~~~~i~~~~~~~~~~~yd~~t~~~ 314 (339)
+++..+....+..+..|+++++..
T Consensus 247 p~~~~la~~~~~~i~v~~~~~~~~ 270 (319)
T 3frx_A 247 PNRYWLAAATATGIKVFSLDPQYL 270 (319)
T ss_dssp SSSSEEEEEETTEEEEEEETTEEE
T ss_pred CCCCEEEEEcCCCcEEEEeCcCee
Confidence 888777766666788888877653
No 103
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=80.21 E-value=36 Score=31.32 Aligned_cols=116 Identities=11% Similarity=-0.002 Sum_probs=70.4
Q ss_pred CCeEEEEEecCCCCeEEEEEECCCceeee-ecCCCCCCCCceeEEEEEC-CeEEEEEe-CCCeEEEEEEcccC-CCCCeE
Q 047931 198 NGALHWRLQKHGGDFVLAAFDLVEERFKE-FPLPDASTSFRFFGTGVLG-DCLCLQFF-KGKMKEHWIMKEYG-VKESWT 273 (339)
Q Consensus 198 ~G~lyw~~~~~~~~~~il~fD~~~~~~~~-i~lP~~~~~~~~~~l~~~~-G~L~~v~~-~~~~l~iW~l~~~~-~~~~W~ 273 (339)
+|...+.+... ...|..+|+.+.+... ++............+..-+ |.+++... .+.++.||.++..+ ....|.
T Consensus 334 dg~~l~va~~~--~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~ 411 (543)
T 1nir_A 334 SHRYFMTAANN--SNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWK 411 (543)
T ss_dssp TSCEEEEEEGG--GTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTS
T ss_pred CCCEEEEEecC--CCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCe
Confidence 56644444432 2378889999887543 3432111100122222224 67766555 67899999998532 123499
Q ss_pred EEEEecCC-CCeeEEEEEeCCeEEEEEC--------CcEEEEEECCCCcEE
Q 047931 274 RVFIHQDP-NNVWPLCLWKNSTKLLVIN--------RKNLLVCDCNNEGSE 315 (339)
Q Consensus 274 ~~~~i~~~-~~~~~~~~~~~~~i~~~~~--------~~~~~~yd~~t~~~~ 315 (339)
.+.++..+ -+...+.++++|..++... +..+.+||.+|.+..
T Consensus 412 ~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 412 KVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp EEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred EEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 88888752 2345677888987777653 346999999988743
No 104
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=80.04 E-value=22 Score=28.61 Aligned_cols=107 Identities=6% Similarity=-0.051 Sum_probs=60.8
Q ss_pred CCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEE
Q 047931 198 NGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVF 276 (339)
Q Consensus 198 ~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~ 276 (339)
+|.+|+.... ..|..||..+.....+..+... ....++.. +|+|++.......+.+| +. +. .....
T Consensus 77 ~g~l~v~~~~----~~i~~~d~~~~~~~~~~~~~~~---~p~~i~~~~~g~l~v~~~~~~~i~~~--~~-~~-~~~~~-- 143 (270)
T 1rwi_B 77 AGTVYVTDFN----NRVVTLAAGSNNQTVLPFDGLN---YPEGLAVDTQGAVYVADRGNNRVVKL--AA-GS-KTQTV-- 143 (270)
T ss_dssp TCCEEEEETT----TEEEEECTTCSCCEECCCCSCS---SEEEEEECTTCCEEEEEGGGTEEEEE--CT-TC-CSCEE--
T ss_pred CCCEEEEcCC----CEEEEEeCCCceEeeeecCCcC---CCcceEECCCCCEEEEECCCCEEEEE--EC-CC-ceeEe--
Confidence 5787766553 3799999988776655432211 22344444 78888877666666665 32 21 11111
Q ss_pred EecCCC-CeeEEEEEeCCeEEEEEC-CcEEEEEECCCCcEEEe
Q 047931 277 IHQDPN-NVWPLCLWKNSTKLLVIN-RKNLLVCDCNNEGSEDV 317 (339)
Q Consensus 277 ~i~~~~-~~~~~~~~~~~~i~~~~~-~~~~~~yd~~t~~~~~v 317 (339)
.....+ ...-+++..+|.+++... +..+..||.+++.....
T Consensus 144 ~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~ 186 (270)
T 1rwi_B 144 LPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVL 186 (270)
T ss_dssp CCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEEC
T ss_pred eccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEee
Confidence 111111 133456666777666553 34799999988776543
No 105
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=79.81 E-value=44 Score=32.11 Aligned_cols=96 Identities=13% Similarity=0.161 Sum_probs=60.2
Q ss_pred eEEEEEECCCceeeee-cCCCCCCCCceeEEEEE-C--CeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecCC-CCeeE
Q 047931 212 FVLAAFDLVEERFKEF-PLPDASTSFRFFGTGVL-G--DCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQDP-NNVWP 286 (339)
Q Consensus 212 ~~il~fD~~~~~~~~i-~lP~~~~~~~~~~l~~~-~--G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~-~~~~~ 286 (339)
..|..+|+.+++...+ .+..... .-..+... + |.+.+....+..+.+|.++. ..|.....+... -.+.-
T Consensus 31 g~I~vwd~~~~~~~~~~~l~~h~~--~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~----~~~~~~~~~~~h~~~V~~ 104 (753)
T 3jro_A 31 KTIKIFEVEGETHKLIDTLTGHEG--PVWRVDWAHPKFGTILASCSYDGKVLIWKEEN----GRWSQIAVHAVHSASVNS 104 (753)
T ss_dssp TEEEEEEEETTEEEEEEEECCCSS--CEEEEEECCTTSCSEEEEEETTSCEEEEEEET----TEEEEEEEECCCSSCEEE
T ss_pred CcEEEEecCCCCCccceeccCCcC--ceEEEEecCCCCCCEEEEEeCCCeEEEEECCC----CcccccccccCCCCCeEE
Confidence 4778888875555443 2221111 12233332 3 77777777888999999986 457777666542 23566
Q ss_pred EEEEeC--CeEEE-EECCcEEEEEECCCCc
Q 047931 287 LCLWKN--STKLL-VINRKNLLVCDCNNEG 313 (339)
Q Consensus 287 ~~~~~~--~~i~~-~~~~~~~~~yd~~t~~ 313 (339)
+++.++ +.+++ ...++.+..||++++.
T Consensus 105 v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~ 134 (753)
T 3jro_A 105 VQWAPHEYGPLLLVASSDGKVSVVEFKENG 134 (753)
T ss_dssp EEECCGGGCSEEEEEETTSEEEEEECCSSS
T ss_pred EEECCCCCCCEEEEEeCCCcEEEEEeecCC
Confidence 677776 65555 4456679999998884
No 106
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=79.68 E-value=29 Score=29.87 Aligned_cols=195 Identities=9% Similarity=0.017 Sum_probs=95.2
Q ss_pred eEEEccCCCEEEEEcccccc------eeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCc
Q 047931 104 LVCTTPKPKIFFVLNPLTRE------SKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNS 176 (339)
Q Consensus 104 Ll~~~~~~~~~~V~NP~T~~------~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~ 176 (339)
+++....+..+.++|..+++ .......... .......+.+ ..+...++... ..-.+.+|+.+++.
T Consensus 128 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~~~~----~dg~v~iwd~~~~~ 199 (416)
T 2pm9_A 128 VLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMS----SVDEVISLAWNQSLAHVFASAG----SSNFASIWDLKAKK 199 (416)
T ss_dssp BEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCC----SSCCCCEEEECSSCTTEEEEES----SSSCEEEEETTTTE
T ss_pred EEEEEcCCCeEEEEECCCCccccccccccccccccC----CCCCeeEEEeCCCCCcEEEEEc----CCCCEEEEECCCCC
Confidence 44444446788889888876 2111110000 1111444555 23233343322 24568888888765
Q ss_pred eEEecccCCccC--ccCCCceEEC--C-eEEEEEecCCCCeEEEEEECCCceeeeecCC-CCCCCCceeEEEEE--CCeE
Q 047931 177 WRRVLASGYTRP--LINVPGTLTN--G-ALHWRLQKHGGDFVLAAFDLVEERFKEFPLP-DASTSFRFFGTGVL--GDCL 248 (339)
Q Consensus 177 W~~~~~~~~~~~--~~~~~~v~~~--G-~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP-~~~~~~~~~~l~~~--~G~L 248 (339)
-...-....... ......+.++ | .+...+..++....|..+|+.+..-....+. ... .....+... +|.+
T Consensus 200 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~~ 277 (416)
T 2pm9_A 200 EVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQ--KGILSLDWCHQDEHL 277 (416)
T ss_dssp EEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCS--SCEEEEEECSSCSSC
T ss_pred cceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCcc--CceeEEEeCCCCCCe
Confidence 433211110000 0011122222 3 3333333321112678888887431111221 111 112233333 6777
Q ss_pred EEEEeCCCeEEEEEEcccCCCCCeEEEEEecC-CCCeeEEEEEeCC-eEEEEEC-CcEEEEEECCCCcE
Q 047931 249 CLQFFKGKMKEHWIMKEYGVKESWTRVFIHQD-PNNVWPLCLWKNS-TKLLVIN-RKNLLVCDCNNEGS 314 (339)
Q Consensus 249 ~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~-~~~~~~~~~~~~~-~i~~~~~-~~~~~~yd~~t~~~ 314 (339)
.+....+..+.+|.++. ...+.++.. .-.+.-+++.+++ .+++... ++.+.+||+++.+.
T Consensus 278 l~s~~~dg~v~~wd~~~------~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 278 LLSSGRDNTVLLWNPES------AEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTN 340 (416)
T ss_dssp EEEEESSSEEEEECSSS------CCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCC
T ss_pred EEEEeCCCCEEEeeCCC------CccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCC
Confidence 77777888999998875 123444433 1124566777777 5666554 55799999987763
No 107
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=79.40 E-value=23 Score=28.47 Aligned_cols=183 Identities=11% Similarity=0.039 Sum_probs=93.2
Q ss_pred CceEEEccCCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEEe
Q 047931 102 NGLVCTTPKPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRV 180 (339)
Q Consensus 102 ~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~ 180 (339)
+|-+.+......++++||-++....++..... ...++.+ ..+. +.... .....+.+|+.++......
T Consensus 77 ~g~l~v~~~~~~i~~~d~~~~~~~~~~~~~~~-------~p~~i~~~~~g~--l~v~~---~~~~~i~~~~~~~~~~~~~ 144 (270)
T 1rwi_B 77 AGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLN-------YPEGLAVDTQGA--VYVAD---RGNNRVVKLAAGSKTQTVL 144 (270)
T ss_dssp TCCEEEEETTTEEEEECTTCSCCEECCCCSCS-------SEEEEEECTTCC--EEEEE---GGGTEEEEECTTCCSCEEC
T ss_pred CCCEEEEcCCCEEEEEeCCCceEeeeecCCcC-------CCcceEECCCCC--EEEEE---CCCCEEEEEECCCceeEee
Confidence 55554444356899999988776655432211 1344544 2232 22221 1133566665554443322
Q ss_pred cccCCccCccCCCceEE--CCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCeEEEEEeCCCe
Q 047931 181 LASGYTRPLINVPGTLT--NGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDCLCLQFFKGKM 257 (339)
Q Consensus 181 ~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~L~~v~~~~~~ 257 (339)
.... .....++.+ +|.+|+..... ..|..||..+.......... .. ....++.. +|.|++.......
T Consensus 145 ~~~~----~~~p~~i~~~~~g~l~v~~~~~---~~i~~~~~~~~~~~~~~~~~-~~--~p~~i~~d~~g~l~v~~~~~~~ 214 (270)
T 1rwi_B 145 PFTG----LNDPDGVAVDNSGNVYVTDTDN---NRVVKLEAESNNQVVLPFTD-IT--APWGIAVDEAGTVYVTEHNTNQ 214 (270)
T ss_dssp CCCS----CCSCCCEEECTTCCEEEEEGGG---TEEEEECTTTCCEEECCCSS-CC--SEEEEEECTTCCEEEEETTTSC
T ss_pred cccc----CCCceeEEEeCCCCEEEEECCC---CEEEEEecCCCceEeecccC-CC--CceEEEECCCCCEEEEECCCCc
Confidence 1111 011223443 58877665432 47999999877654432211 11 22344544 6788887776666
Q ss_pred EEEEEEcccCCCCCeEEEEEecC-CC-CeeEEEEEeCCeEEEEEC-CcEEEEEECCCCc
Q 047931 258 KEHWIMKEYGVKESWTRVFIHQD-PN-NVWPLCLWKNSTKLLVIN-RKNLLVCDCNNEG 313 (339)
Q Consensus 258 l~iW~l~~~~~~~~W~~~~~i~~-~~-~~~~~~~~~~~~i~~~~~-~~~~~~yd~~t~~ 313 (339)
+.+|..+. ..... +.. .+ ...-+++.++|.+++... +.++..|++..++
T Consensus 215 v~~~~~~~---~~~~~----~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 215 VVKLLAGS---TTSTV----LPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp EEEECTTC---SCCEE----CCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred EEEEcCCC---Cccee----eccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 66665432 11111 211 12 133455556777666543 4568888887665
No 108
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=79.19 E-value=28 Score=29.47 Aligned_cols=145 Identities=10% Similarity=0.033 Sum_probs=77.8
Q ss_pred CcEEEEEEeCCCceEEecccCCccCccCCCceEE--CCeEEEEEecCCCCeEEEEEECCCceeeee-cCCCCCCCCceeE
Q 047931 164 NMSVAIFSLRMNSWRRVLASGYTRPLINVPGTLT--NGALHWRLQKHGGDFVLAAFDLVEERFKEF-PLPDASTSFRFFG 240 (339)
Q Consensus 164 ~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~ 240 (339)
...+.+++..++.|........... ..-..+.+ +|..-..+..+ ..+..+|..++.+..+ .+..... .-..
T Consensus 37 D~~i~iw~~~~~~~~~~~~~~~~h~-~~v~~~~~sp~g~~l~s~s~D---~~v~iw~~~~~~~~~~~~~~~h~~--~v~~ 110 (345)
T 3fm0_A 37 DRRIRIWGTEGDSWICKSVLSEGHQ-RTVRKVAWSPCGNYLASASFD---ATTCIWKKNQDDFECVTTLEGHEN--EVKS 110 (345)
T ss_dssp TSCEEEEEEETTEEEEEEEECSSCS-SCEEEEEECTTSSEEEEEETT---SCEEEEEECCC-EEEEEEECCCSS--CEEE
T ss_pred CCeEEEEEcCCCcceeeeeeccccC-CcEEEEEECCCCCEEEEEECC---CcEEEEEccCCCeEEEEEccCCCC--CceE
Confidence 4568888888887754321111100 00011222 34433333332 3566777776654433 2221111 1223
Q ss_pred EEEE-CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecCC-CCeeEEEEEeCCeEEEEE-CCcEEEEEECCCCcEEEe
Q 047931 241 TGVL-GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQDP-NNVWPLCLWKNSTKLLVI-NRKNLLVCDCNNEGSEDV 317 (339)
Q Consensus 241 l~~~-~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~-~~~~~~~~~~~~~i~~~~-~~~~~~~yd~~t~~~~~v 317 (339)
+.-. +|++.+....+..+.||.+++. ..+.....+... -.+.-+++.+++++++.. .++.+..||.+++++..+
T Consensus 111 v~~sp~~~~l~s~s~D~~v~iwd~~~~---~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~ 187 (345)
T 3fm0_A 111 VAWAPSGNLLATCSRDKSVWVWEVDEE---DEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCC 187 (345)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEECTT---SCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEE
T ss_pred EEEeCCCCEEEEEECCCeEEEEECCCC---CCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEE
Confidence 3333 7777777778889999999862 345555555432 225566777777655544 455688999888776543
No 109
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=78.81 E-value=34 Score=30.10 Aligned_cols=109 Identities=11% Similarity=0.137 Sum_probs=61.5
Q ss_pred eEECCeEEEEEecCCCCeEEEEEECCCce-eeeecCCCCCCCCceeEEEEECCeEEEEEeCCCeEEEEEEcccCCCCCeE
Q 047931 195 TLTNGALHWRLQKHGGDFVLAAFDLVEER-FKEFPLPDASTSFRFFGTGVLGDCLCLQFFKGKMKEHWIMKEYGVKESWT 273 (339)
Q Consensus 195 v~~~G~lyw~~~~~~~~~~il~fD~~~~~-~~~i~lP~~~~~~~~~~l~~~~G~L~~v~~~~~~l~iW~l~~~~~~~~W~ 273 (339)
+..+|.....+..+ ..|..+|+.+.+ ...+..+.... ....-...++.+.++...+..+.||.++. .+..
T Consensus 325 ~~~~~~~l~~~~~d---g~i~vwd~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~l~s~~~dg~v~iwd~~~----~~~~ 395 (445)
T 2ovr_B 325 MELKDNILVSGNAD---STVKIWDIKTGQCLQTLQGPNKHQ--SAVTCLQFNKNFVITSSDDGTVKLWDLKT----GEFI 395 (445)
T ss_dssp EEEETTEEEEEETT---SCEEEEETTTCCEEEEECSTTSCS--SCEEEEEECSSEEEEEETTSEEEEEETTT----CCEE
T ss_pred EEEeCCEEEEEeCC---CeEEEEECCCCcEEEEEccCCCCC--CCEEEEEECCCEEEEEeCCCeEEEEECCC----Ccee
Confidence 44556544444433 478899997755 34445443222 12222334677777777889999999875 2232
Q ss_pred EEEEecC--CC--CeeEEEEEeCCeEEEEEC-Cc----EEEEEECCCC
Q 047931 274 RVFIHQD--PN--NVWPLCLWKNSTKLLVIN-RK----NLLVCDCNNE 312 (339)
Q Consensus 274 ~~~~i~~--~~--~~~~~~~~~~~~i~~~~~-~~----~~~~yd~~t~ 312 (339)
....... .. .+.-+++.++|.++.... ++ ++.+||++..
T Consensus 396 ~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 396 RNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred eeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 2221111 11 145566667776666553 22 4999998764
No 110
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=78.25 E-value=29 Score=29.04 Aligned_cols=202 Identities=8% Similarity=-0.039 Sum_probs=101.1
Q ss_pred eeeCceEEEc-cCCCEEEEEcccccce-eecCCCCCCCCCCCCCC--eeEEee-eCCceEEEEEeeEeCCCcEEEEEEeC
Q 047931 99 GSCNGLVCTT-PKPKIFFVLNPLTRES-KRIPDVPFEPFPRSSDD--LYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLR 173 (339)
Q Consensus 99 ~s~~GLl~~~-~~~~~~~V~NP~T~~~-~~LP~~~~~~~~~~~~~--~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~ 173 (339)
...+..+.+. .....+.++|+.|++. ..++..... .+..... ..++.+ ..+.+-.+.- ..+...+.+++.+
T Consensus 97 s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~dg~~l~~~~---~~~~~~i~~~d~~ 172 (353)
T 3vgz_A 97 NNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRK-RTEEVRPLQPRELVADDATNTVYISG---IGKESVIWVVDGG 172 (353)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCC-CCSSCCCCEEEEEEEETTTTEEEEEE---ESSSCEEEEEETT
T ss_pred CCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCc-cccccCCCCCceEEECCCCCEEEEEe---cCCCceEEEEcCC
Confidence 3334434333 3457899999999875 333332211 0111111 334555 3344433322 2234568888887
Q ss_pred CCceEEecccCCccCccCCCceEECCeEEEEEecCCCCeEEEEEECCCceee-eecCCCCCCCCceeEEEEE-CCe-EEE
Q 047931 174 MNSWRRVLASGYTRPLINVPGTLTNGALHWRLQKHGGDFVLAAFDLVEERFK-EFPLPDASTSFRFFGTGVL-GDC-LCL 250 (339)
Q Consensus 174 ~~~W~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~~~~~-~i~lP~~~~~~~~~~l~~~-~G~-L~~ 250 (339)
++.=.. .++........-...-+|...++.... ..+..+|+.+.+.. .++.+..........+... +|+ |++
T Consensus 173 ~~~~~~--~~~~~~~~~~~~~~s~dg~~l~~~~~~---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 247 (353)
T 3vgz_A 173 NIKLKT--AIQNTGKMSTGLALDSEGKRLYTTNAD---GELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFI 247 (353)
T ss_dssp TTEEEE--EECCCCTTCCCCEEETTTTEEEEECTT---SEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEE
T ss_pred CCceEE--EecCCCCccceEEECCCCCEEEEEcCC---CeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEE
Confidence 653222 122000001111233356544444332 47889999987654 4455333211122234444 554 655
Q ss_pred EEeCCCeEEEEEEcccCCCCCeEEEEEecCCCCeeEEEEEeCCe-EEEEE-CCcEEEEEECCCCcEEE
Q 047931 251 QFFKGKMKEHWIMKEYGVKESWTRVFIHQDPNNVWPLCLWKNST-KLLVI-NRKNLLVCDCNNEGSED 316 (339)
Q Consensus 251 v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~-i~~~~-~~~~~~~yd~~t~~~~~ 316 (339)
.......+.+|.++. .+-.....+..+ .-+++.++|+ +++.. .+..+..||.++++...
T Consensus 248 ~~~~~~~v~~~d~~~----~~~~~~~~~~~~---~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~ 308 (353)
T 3vgz_A 248 TDSKAAEVLVVDTRN----GNILAKVAAPES---LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVK 308 (353)
T ss_dssp EESSSSEEEEEETTT----CCEEEEEECSSC---CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EeCCCCEEEEEECCC----CcEEEEEEcCCC---ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEE
Confidence 554668888887754 222222233222 2366777876 55544 34579999999887553
No 111
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=78.22 E-value=26 Score=28.58 Aligned_cols=95 Identities=7% Similarity=0.072 Sum_probs=57.7
Q ss_pred eEEEEEECCCceee-eecCCCCCCCCceeEEEEE-CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecCC-CCeeEEE
Q 047931 212 FVLAAFDLVEERFK-EFPLPDASTSFRFFGTGVL-GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQDP-NNVWPLC 288 (339)
Q Consensus 212 ~~il~fD~~~~~~~-~i~lP~~~~~~~~~~l~~~-~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~-~~~~~~~ 288 (339)
..|..+|+.+.+.. .+..... ....+... +|. .++...+..+.+|.++. .+ ....+..+ -.+.-++
T Consensus 205 g~i~i~d~~~~~~~~~~~~~~~----~i~~~~~~~~~~-l~~~~~dg~v~iwd~~~----~~--~~~~~~~~~~~i~~~~ 273 (313)
T 3odt_A 205 GLIKLVDMHTGDVLRTYEGHES----FVYCIKLLPNGD-IVSCGEDRTVRIWSKEN----GS--LKQVITLPAISIWSVD 273 (313)
T ss_dssp SEEEEEETTTCCEEEEEECCSS----CEEEEEECTTSC-EEEEETTSEEEEECTTT----CC--EEEEEECSSSCEEEEE
T ss_pred CeEEEEECCchhhhhhhhcCCc----eEEEEEEecCCC-EEEEecCCEEEEEECCC----Cc--eeEEEeccCceEEEEE
Confidence 48999999876533 3332211 12234444 554 33444788999998875 22 23333332 1256677
Q ss_pred EEeCCeEEEEECCcEEEEEECCCCcEEEe
Q 047931 289 LWKNSTKLLVINRKNLLVCDCNNEGSEDV 317 (339)
Q Consensus 289 ~~~~~~i~~~~~~~~~~~yd~~t~~~~~v 317 (339)
+.+++.++....++.+..||++++++...
T Consensus 274 ~~~~~~~~~~~~dg~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 274 CMSNGDIIVGSSDNLVRIFSQEKSRWASE 302 (313)
T ss_dssp ECTTSCEEEEETTSCEEEEESCGGGCCC-
T ss_pred EccCCCEEEEeCCCcEEEEeCCCCceeeh
Confidence 77788877767777899999999886543
No 112
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=78.17 E-value=31 Score=29.41 Aligned_cols=98 Identities=7% Similarity=-0.117 Sum_probs=52.0
Q ss_pred eEEEEEECCCceeeeecCCCCC---CCCceeEEEEECCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecCC-CCeeEE
Q 047931 212 FVLAAFDLVEERFKEFPLPDAS---TSFRFFGTGVLGDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQDP-NNVWPL 287 (339)
Q Consensus 212 ~~il~fD~~~~~~~~i~lP~~~---~~~~~~~l~~~~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~-~~~~~~ 287 (339)
..|..+|+.+.+.......... ............+...++...+..+.+|.+.. ...+.++... -.+.-+
T Consensus 267 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~------~~~~~~~~~~~~~v~~~ 340 (408)
T 4a11_B 267 NRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYS------GEQITMLKGHYKTVDCC 340 (408)
T ss_dssp SCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTT------CCEEEEECCCSSCEEEE
T ss_pred CeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcC------CcceeeeccCCCeEEEE
Confidence 4788999887654332111111 00011112222333344444667888998875 2234445432 225667
Q ss_pred EEEeCCeEEEEE-CCcEEEEEECCCCcEE
Q 047931 288 CLWKNSTKLLVI-NRKNLLVCDCNNEGSE 315 (339)
Q Consensus 288 ~~~~~~~i~~~~-~~~~~~~yd~~t~~~~ 315 (339)
++.+++..++.. .++.+..||+++.+..
T Consensus 341 ~~s~~~~~l~s~~~dg~i~iw~~~~~~~~ 369 (408)
T 4a11_B 341 VFQSNFQELYSGSRDCNILAWVPSLYEPV 369 (408)
T ss_dssp EEETTTTEEEEEETTSCEEEEEECC----
T ss_pred EEcCCCCEEEEECCCCeEEEEeCCCCCcc
Confidence 888888766655 4567999999988743
No 113
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=77.97 E-value=16 Score=30.67 Aligned_cols=105 Identities=7% Similarity=-0.078 Sum_probs=59.0
Q ss_pred ECCeEEEEEecCCCCeEEEEEECCCceee-eecCCCCCCCCceeEEEEE-CCe-EEEEEeCCCeEEEEEEcccCCCCCeE
Q 047931 197 TNGALHWRLQKHGGDFVLAAFDLVEERFK-EFPLPDASTSFRFFGTGVL-GDC-LCLQFFKGKMKEHWIMKEYGVKESWT 273 (339)
Q Consensus 197 ~~G~lyw~~~~~~~~~~il~fD~~~~~~~-~i~lP~~~~~~~~~~l~~~-~G~-L~~v~~~~~~l~iW~l~~~~~~~~W~ 273 (339)
.++.+|...... ..|..+|+.+.+.. .++++.... ...+... +|+ +++.......+.+|.++. .+-
T Consensus 9 ~~~~~~v~~~~~---~~v~~~d~~~~~~~~~~~~~~~~~---~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t----~~~- 77 (349)
T 1jmx_B 9 AGHEYMIVTNYP---NNLHVVDVASDTVYKSCVMPDKFG---PGTAMMAPDNRTAYVLNNHYGDIYGIDLDT----CKN- 77 (349)
T ss_dssp TTCEEEEEEETT---TEEEEEETTTTEEEEEEECSSCCS---SCEEEECTTSSEEEEEETTTTEEEEEETTT----TEE-
T ss_pred CCCEEEEEeCCC---CeEEEEECCCCcEEEEEecCCCCC---CceeEECCCCCEEEEEeCCCCcEEEEeCCC----CcE-
Confidence 345555555443 58999999987653 456654211 1123333 665 455444677788887653 212
Q ss_pred EEEEecCCC-------CeeEEEEEeCCeEEEEEC-------------CcEEEEEECCCCc
Q 047931 274 RVFIHQDPN-------NVWPLCLWKNSTKLLVIN-------------RKNLLVCDCNNEG 313 (339)
Q Consensus 274 ~~~~i~~~~-------~~~~~~~~~~~~i~~~~~-------------~~~~~~yd~~t~~ 313 (339)
..++...- ...-+++.++|+.++... ...+..||+++++
T Consensus 78 -~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 136 (349)
T 1jmx_B 78 -TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL 136 (349)
T ss_dssp -EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG
T ss_pred -EEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcc
Confidence 22332210 134566777886555443 2579999998854
No 114
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=77.29 E-value=38 Score=29.86 Aligned_cols=95 Identities=13% Similarity=0.125 Sum_probs=61.0
Q ss_pred eEEEEEECCCceee-eecCCCCCCCCceeEEEEECCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecCCCCeeEEEEE
Q 047931 212 FVLAAFDLVEERFK-EFPLPDASTSFRFFGTGVLGDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQDPNNVWPLCLW 290 (339)
Q Consensus 212 ~~il~fD~~~~~~~-~i~lP~~~~~~~~~~l~~~~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~ 290 (339)
..|..+|+.+.+.. .+..... .......+|...+....+..+.+|.+++.. ........-....+++.
T Consensus 332 g~i~vwd~~~~~~~~~~~~h~~-----~v~~~~~~~~~l~s~s~dg~v~vwd~~~~~------~~~~~~~~~~~~~~~~~ 400 (464)
T 3v7d_B 332 TTIRIWDLENGELMYTLQGHTA-----LVGLLRLSDKFLVSAAADGSIRGWDANDYS------RKFSYHHTNLSAITTFY 400 (464)
T ss_dssp SCEEEEETTTTEEEEEECCCSS-----CEEEEEECSSEEEEEETTSEEEEEETTTCC------EEEEEECTTCCCEEEEE
T ss_pred CcEEEEECCCCcEEEEEeCCCC-----cEEEEEEcCCEEEEEeCCCcEEEEECCCCc------eeeeecCCCCccEEEEE
Confidence 47888999876543 3332111 223333457766666688899999988621 22233232124567777
Q ss_pred eCCeEEEEECCcEEEEEECCCCcEEEe
Q 047931 291 KNSTKLLVINRKNLLVCDCNNEGSEDV 317 (339)
Q Consensus 291 ~~~~i~~~~~~~~~~~yd~~t~~~~~v 317 (339)
.++.+++...++.+..||+++++....
T Consensus 401 ~~~~~l~~~~dg~i~iwd~~~g~~~~~ 427 (464)
T 3v7d_B 401 VSDNILVSGSENQFNIYNLRSGKLVHA 427 (464)
T ss_dssp ECSSEEEEEETTEEEEEETTTCCEEES
T ss_pred eCCCEEEEecCCeEEEEECCCCcEEeh
Confidence 888888877777899999999986643
No 115
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=77.26 E-value=28 Score=28.30 Aligned_cols=194 Identities=10% Similarity=0.041 Sum_probs=97.8
Q ss_pred EEeeeCceEEEccC-CCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCC
Q 047931 97 IVGSCNGLVCTTPK-PKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRM 174 (339)
Q Consensus 97 ~~~s~~GLl~~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~ 174 (339)
+....+|-+.+... ...++++||. ++...++.+... ....++.. ..+. +.... .....+..|+..
T Consensus 20 i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~------~~~~~i~~~~~g~--l~v~~---~~~~~i~~~~~~- 86 (299)
T 2z2n_A 20 ITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPD------AKVMCLTISSDGE--VWFTE---NAANKIGRITKK- 86 (299)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTT------CCEEEEEECTTSC--EEEEE---TTTTEEEEECTT-
T ss_pred eEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCccc------CceeeEEECCCCC--EEEeC---CCCCeEEEECCC-
Confidence 43345666655543 5689999998 766655432111 01334444 2222 11111 112345566554
Q ss_pred CceEEecccCCccCccCCCceEE--CCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCeEEEE
Q 047931 175 NSWRRVLASGYTRPLINVPGTLT--NGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDCLCLQ 251 (339)
Q Consensus 175 ~~W~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~L~~v 251 (339)
+..+... .+... ....++.+ +|.+|...... ..|..+|. +.+...+..|.... ....++.. +|.|++.
T Consensus 87 g~~~~~~-~~~~~--~~~~~i~~~~~g~l~v~~~~~---~~i~~~d~-~g~~~~~~~~~~~~--~~~~i~~~~~g~l~v~ 157 (299)
T 2z2n_A 87 GIIKEYT-LPNPD--SAPYGITEGPNGDIWFTEMNG---NRIGRITD-DGKIREYELPNKGS--YPSFITLGSDNALWFT 157 (299)
T ss_dssp SCEEEEE-CSSTT--CCEEEEEECTTSCEEEEETTT---TEEEEECT-TCCEEEEECSSTTC--CEEEEEECTTSCEEEE
T ss_pred CcEEEEe-CCCcC--CCceeeEECCCCCEEEEecCC---ceEEEECC-CCCEEEecCCCCCC--CCceEEEcCCCCEEEE
Confidence 4444432 11110 11123433 47766544332 47899999 66676666554322 22344444 7888887
Q ss_pred EeCCCeEEEEEEcccCCCCCeEEEEEecCCC-CeeEEEEEeCCeEEEEEC-CcEEEEEECCCCcEEEeEE
Q 047931 252 FFKGKMKEHWIMKEYGVKESWTRVFIHQDPN-NVWPLCLWKNSTKLLVIN-RKNLLVCDCNNEGSEDVAV 319 (339)
Q Consensus 252 ~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~-~~~~~~~~~~~~i~~~~~-~~~~~~yd~~t~~~~~v~~ 319 (339)
......+.++ +.. .+... ..+.... ...-+++..+|.+++... ...+..||+ +++++.+..
T Consensus 158 ~~~~~~i~~~--~~~---g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~ 220 (299)
T 2z2n_A 158 ENQNNAIGRI--TES---GDITE-FKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKI 220 (299)
T ss_dssp ETTTTEEEEE--CTT---CCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEEC
T ss_pred eCCCCEEEEE--cCC---CcEEE-eeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEEC
Confidence 6655555444 431 23332 2222222 133345555677777653 457999999 777776543
No 116
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=76.75 E-value=31 Score=28.63 Aligned_cols=181 Identities=7% Similarity=0.072 Sum_probs=94.9
Q ss_pred CCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCce--EEecccCCc
Q 047931 110 KPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSW--RRVLASGYT 186 (339)
Q Consensus 110 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W--~~~~~~~~~ 186 (339)
....+.++|+.|++....-..+.. .. ++.+ ..+.+-++. . .....+.+++..++.- +.+.....
T Consensus 18 ~~~~v~~~d~~~~~~~~~~~~~~~-------~~-~~~~s~dg~~l~~~-~---~~~~~i~~~d~~~~~~~~~~~~~~~~- 84 (331)
T 3u4y_A 18 HLRRISFFSTDTLEILNQITLGYD-------FV-DTAITSDCSNVVVT-S---DFCQTLVQIETQLEPPKVVAIQEGQS- 84 (331)
T ss_dssp GGTEEEEEETTTCCEEEEEECCCC-------EE-EEEECSSSCEEEEE-E---STTCEEEEEECSSSSCEEEEEEECSS-
T ss_pred CCCeEEEEeCcccceeeeEEccCC-------cc-eEEEcCCCCEEEEE-e---CCCCeEEEEECCCCceeEEecccCCC-
Confidence 456889999999887543222221 12 4555 334433332 2 2244788899887764 22211110
Q ss_pred cCccCCC--ceEECCeEEEEEecCCCCeEEEEEECCCceeee-ecCCCCCCCCceeEEEEE-CCe-EEEEEeCCCe-EEE
Q 047931 187 RPLINVP--GTLTNGALHWRLQKHGGDFVLAAFDLVEERFKE-FPLPDASTSFRFFGTGVL-GDC-LCLQFFKGKM-KEH 260 (339)
Q Consensus 187 ~~~~~~~--~v~~~G~lyw~~~~~~~~~~il~fD~~~~~~~~-i~lP~~~~~~~~~~l~~~-~G~-L~~v~~~~~~-l~i 260 (339)
... .+.-+|..-+.....+....|..+|+.+.+... ++.... ...+... +|+ |++....... +.+
T Consensus 85 ----~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~-----~~~~~~spdg~~l~~~~~~~~~~i~~ 155 (331)
T 3u4y_A 85 ----SMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYD-----AVGIAISPNGNGLILIDRSSANTVRR 155 (331)
T ss_dssp ----CCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTT-----EEEEEECTTSSCEEEEEETTTTEEEE
T ss_pred ----CccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCC-----ccceEECCCCCEEEEEecCCCceEEE
Confidence 111 122345433333222122279999998876533 333221 1234444 665 6666565555 999
Q ss_pred EEEcccCCCCCeEE-EEEecCCCCeeEEEEEeCCe-EEEEEC-CcEEEEEECCCCcE
Q 047931 261 WIMKEYGVKESWTR-VFIHQDPNNVWPLCLWKNST-KLLVIN-RKNLLVCDCNNEGS 314 (339)
Q Consensus 261 W~l~~~~~~~~W~~-~~~i~~~~~~~~~~~~~~~~-i~~~~~-~~~~~~yd~~t~~~ 314 (339)
|.++..+ ..... ...+....+..-+++.++|+ +++... +..+..||+++++.
T Consensus 156 ~~~~~~g--~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 156 FKIDADG--VLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN 210 (331)
T ss_dssp EEECTTC--CEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS
T ss_pred EEECCCC--cEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc
Confidence 9998533 11111 12222222345566777887 444443 45799999998885
No 117
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=76.42 E-value=27 Score=28.96 Aligned_cols=108 Identities=7% Similarity=-0.112 Sum_probs=60.7
Q ss_pred CC-eEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCeEEEEEeCCCeEEEEEEcccCCCCCeEEE
Q 047931 198 NG-ALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDCLCLQFFKGKMKEHWIMKEYGVKESWTRV 275 (339)
Q Consensus 198 ~G-~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~ 275 (339)
+| .+||..... ..|..+|.. ++.+.+..|... ...+... +|+|++.......+.+|..+ ++....
T Consensus 55 ~g~~l~~~d~~~---~~i~~~~~~-g~~~~~~~~~~~----~~gl~~d~dG~l~v~~~~~~~v~~~~~~-----g~~~~~ 121 (305)
T 3dr2_A 55 AQRTLVWSDLVG---RRVLGWRED-GTVDVLLDATAF----TNGNAVDAQQRLVHCEHGRRAITRSDAD-----GQAHLL 121 (305)
T ss_dssp GGTEEEEEETTT---TEEEEEETT-SCEEEEEESCSC----EEEEEECTTSCEEEEETTTTEEEEECTT-----SCEEEE
T ss_pred CCCEEEEEECCC---CEEEEEeCC-CCEEEEeCCCCc----cceeeECCCCCEEEEECCCCEEEEECCC-----CCEEEE
Confidence 45 489987554 478888884 445555443322 2233333 78887766555555555432 223332
Q ss_pred EEecC--CC-CeeEEEEEeCCeEEEEE------------------CCcEEEEEECCCCcEEEeE
Q 047931 276 FIHQD--PN-NVWPLCLWKNSTKLLVI------------------NRKNLLVCDCNNEGSEDVA 318 (339)
Q Consensus 276 ~~i~~--~~-~~~~~~~~~~~~i~~~~------------------~~~~~~~yd~~t~~~~~v~ 318 (339)
..... ++ ...-+++..+|.+++.- ....++.||+++++++.+.
T Consensus 122 ~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 185 (305)
T 3dr2_A 122 VGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA 185 (305)
T ss_dssp ECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE
T ss_pred EeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe
Confidence 21111 11 12346677788877731 1246999999888877653
No 118
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=76.39 E-value=47 Score=30.51 Aligned_cols=188 Identities=13% Similarity=0.040 Sum_probs=96.7
Q ss_pred ceEEEccCCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEEec
Q 047931 103 GLVCTTPKPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRVL 181 (339)
Q Consensus 103 GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~ 181 (339)
++++.....+...++|..|++.+.+...+. ..+.+ .++.+-+.... ...+...+.+++..++.++.+.
T Consensus 123 ~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~----------~~~~~spDG~~la~~~~-~~~~~~~i~~~d~~~g~~~~l~ 191 (582)
T 3o4h_A 123 AVVFTGATEDRVALYALDGGGLRELARLPG----------FGFVSDIRGDLIAGLGF-FGGGRVSLFTSNLSSGGLRVFD 191 (582)
T ss_dssp CEEEEEECSSCEEEEEEETTEEEEEEEESS----------CEEEEEEETTEEEEEEE-EETTEEEEEEEETTTCCCEEEC
T ss_pred eEEEEecCCCCceEEEccCCcEEEeecCCC----------ceEEECCCCCEEEEEEE-cCCCCeEEEEEcCCCCCceEee
Confidence 455555444556688999988776653221 12333 33444333322 2222355788888888888774
Q ss_pred ccCCccCccCCCceEECCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCC-CC--Ccee-EEEEE-CCeEEEEEeCCC
Q 047931 182 ASGYTRPLINVPGTLTNGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDAS-TS--FRFF-GTGVL-GDCLCLQFFKGK 256 (339)
Q Consensus 182 ~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~-~~--~~~~-~l~~~-~G~L~~v~~~~~ 256 (339)
...... ......=+|...+..... ....|..+|+++.+...+.-.... .. .... ..... +|++++......
T Consensus 192 ~~~~~~---~~~~~SpDG~~l~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g 267 (582)
T 3o4h_A 192 SGEGSF---SSASISPGMKVTAGLETA-REARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREG 267 (582)
T ss_dssp CSSCEE---EEEEECTTSCEEEEEECS-SCEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETT
T ss_pred cCCCcc---ccceECCCCCEEEEccCC-CeeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCCcEEEEEEcCC
Confidence 332211 111122356654433322 234788999998877632211110 00 0000 11123 777777666777
Q ss_pred eEEEEEEcccCCCCCeEEEEEecCCCCeeEEEEEeCCeEEEEEC-C---cEEEEEECCCCcEEEe
Q 047931 257 MKEHWIMKEYGVKESWTRVFIHQDPNNVWPLCLWKNSTKLLVIN-R---KNLLVCDCNNEGSEDV 317 (339)
Q Consensus 257 ~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~i~~~~~-~---~~~~~yd~~t~~~~~v 317 (339)
.+.||.+ + . ... .... ...-+.+. +|.+++... . ..++.+|.++ +.+.+
T Consensus 268 ~~~l~~~---g--~-~~~---~~~~-~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~-~~~~l 320 (582)
T 3o4h_A 268 RSAVFID---G--E-RVE---APQG-NHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE-PLLEG 320 (582)
T ss_dssp EEEEEET---T--E-EEC---CCSS-EEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC-EEECC
T ss_pred cEEEEEE---C--C-eec---cCCC-ceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC-ceEEE
Confidence 8999998 2 1 111 1111 13445666 777666432 2 2488888776 44433
No 119
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=76.04 E-value=32 Score=28.43 Aligned_cols=100 Identities=8% Similarity=-0.062 Sum_probs=56.3
Q ss_pred CCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEE
Q 047931 198 NGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVF 276 (339)
Q Consensus 198 ~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~ 276 (339)
+|.+||..... ..|..+|+.+.+...+..|... ..++.. +|+|++.. ...+.+|..+. .++....
T Consensus 24 ~~~l~~~d~~~---~~i~~~d~~~~~~~~~~~~~~~-----~~i~~~~dG~l~v~~--~~~l~~~d~~~----g~~~~~~ 89 (297)
T 3g4e_A 24 SNSLLFVDIPA---KKVCRWDSFTKQVQRVTMDAPV-----SSVALRQSGGYVATI--GTKFCALNWKE----QSAVVLA 89 (297)
T ss_dssp TTEEEEEETTT---TEEEEEETTTCCEEEEECSSCE-----EEEEEBTTSSEEEEE--TTEEEEEETTT----TEEEEEE
T ss_pred CCEEEEEECCC---CEEEEEECCCCcEEEEeCCCce-----EEEEECCCCCEEEEE--CCeEEEEECCC----CcEEEEE
Confidence 48999987654 5899999998887776655322 233433 77765543 34444444332 3354444
Q ss_pred EecC--CC-CeeEEEEEeCCeEEEEEC------------CcEEEEEECCC
Q 047931 277 IHQD--PN-NVWPLCLWKNSTKLLVIN------------RKNLLVCDCNN 311 (339)
Q Consensus 277 ~i~~--~~-~~~~~~~~~~~~i~~~~~------------~~~~~~yd~~t 311 (339)
.... +. ...-+++.++|.+++... ...++.+|.+.
T Consensus 90 ~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g 139 (297)
T 3g4e_A 90 TVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH 139 (297)
T ss_dssp ECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS
T ss_pred ecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC
Confidence 3322 11 122344556777666431 13588888764
No 120
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=76.03 E-value=35 Score=28.80 Aligned_cols=179 Identities=11% Similarity=0.019 Sum_probs=89.9
Q ss_pred CceEEEccCCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEEe
Q 047931 102 NGLVCTTPKPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRV 180 (339)
Q Consensus 102 ~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~ 180 (339)
+|.++....+..+.++|..+++....-..+.. ....+.+ ..+.+-+.+- ....+.+++.+++.-...
T Consensus 154 ~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~-------~v~~~~~~~~~~~l~sg~-----~d~~v~~wd~~~~~~~~~ 221 (340)
T 1got_B 154 DNQIVTSSGDTTCALWDIETGQQTTTFTGHTG-------DVMSLSLAPDTRLFVSGA-----CDASAKLWDVREGMCRQT 221 (340)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECCCSS-------CEEEEEECTTSSEEEEEE-----TTSCEEEEETTTCSEEEE
T ss_pred CCcEEEEECCCcEEEEECCCCcEEEEEcCCCC-------ceEEEEECCCCCEEEEEe-----CCCcEEEEECCCCeeEEE
Confidence 44444444567788888888764332111111 1444555 3333322221 245678888776543221
Q ss_pred -cccCCccCccCCCceEE--CCeEEEEEecCCCCeEEEEEECCCceee-eecCCCCCCCCceeEEEEE-CCeEEEEEeCC
Q 047931 181 -LASGYTRPLINVPGTLT--NGALHWRLQKHGGDFVLAAFDLVEERFK-EFPLPDASTSFRFFGTGVL-GDCLCLQFFKG 255 (339)
Q Consensus 181 -~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~~~~~-~i~lP~~~~~~~~~~l~~~-~G~L~~v~~~~ 255 (339)
...... -.++.+ +|.....+..+ ..|-.+|+.+.+-. .+..+.... ....+.-. +|++.++...+
T Consensus 222 ~~~h~~~-----v~~v~~~p~~~~l~s~s~d---~~v~iwd~~~~~~~~~~~~~~~~~--~v~~~~~s~~g~~l~~g~~d 291 (340)
T 1got_B 222 FTGHESD-----INAICFFPNGNAFATGSDD---ATCRLFDLRADQELMTYSHDNIIC--GITSVSFSKSGRLLLAGYDD 291 (340)
T ss_dssp ECCCSSC-----EEEEEECTTSSEEEEEETT---SCEEEEETTTTEEEEEECCTTCCS--CEEEEEECTTSSEEEEEETT
T ss_pred EcCCcCC-----EEEEEEcCCCCEEEEEcCC---CcEEEEECCCCcEEEEEccCCccc--ceEEEEECCCCCEEEEECCC
Confidence 111100 111222 35444444333 47888998876532 233222111 11233333 78888777788
Q ss_pred CeEEEEEEcccCCCCCeEEEEEecC-CCCeeEEEEEeCCeEEEEE-CCcEEEEEE
Q 047931 256 KMKEHWIMKEYGVKESWTRVFIHQD-PNNVWPLCLWKNSTKLLVI-NRKNLLVCD 308 (339)
Q Consensus 256 ~~l~iW~l~~~~~~~~W~~~~~i~~-~~~~~~~~~~~~~~i~~~~-~~~~~~~yd 308 (339)
..+.||.+.. ......+.. .-.+.-+++.++|..++.. .++.+..||
T Consensus 292 ~~i~vwd~~~------~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 292 FNCNVWDALK------ADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp SEEEEEETTT------CCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CeEEEEEccc------CcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 9999998764 223344433 1125566777777655544 344566664
No 121
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=75.72 E-value=35 Score=28.73 Aligned_cols=103 Identities=8% Similarity=-0.088 Sum_probs=56.7
Q ss_pred CeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEE-ECCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEE
Q 047931 199 GALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGV-LGDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFI 277 (339)
Q Consensus 199 G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~-~~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~ 277 (339)
|.+||..... ..|..+|..+++.+.+..|.. ...++. -+|++++... .. |+.++.. +.+......
T Consensus 61 ~~l~~~d~~~---~~i~~~d~~~~~~~~~~~~~~-----v~~i~~~~dg~l~v~~~--~g--l~~~d~~--~g~~~~~~~ 126 (326)
T 2ghs_A 61 GTAWWFNILE---RELHELHLASGRKTVHALPFM-----GSALAKISDSKQLIASD--DG--LFLRDTA--TGVLTLHAE 126 (326)
T ss_dssp TEEEEEEGGG---TEEEEEETTTTEEEEEECSSC-----EEEEEEEETTEEEEEET--TE--EEEEETT--TCCEEEEEC
T ss_pred CEEEEEECCC---CEEEEEECCCCcEEEEECCCc-----ceEEEEeCCCeEEEEEC--CC--EEEEECC--CCcEEEEee
Confidence 7899987654 479999999988877766532 122333 4788877652 23 4444421 133433322
Q ss_pred ecCC--C-CeeEEEEEeCCeEEEEEC-------CcEEEEEECCCCcEEEe
Q 047931 278 HQDP--N-NVWPLCLWKNSTKLLVIN-------RKNLLVCDCNNEGSEDV 317 (339)
Q Consensus 278 i~~~--~-~~~~~~~~~~~~i~~~~~-------~~~~~~yd~~t~~~~~v 317 (339)
.... . ...-+++.++|.+++... ...++.+| +++.+.+
T Consensus 127 ~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~ 174 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKL 174 (326)
T ss_dssp SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEE
T ss_pred CCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEe
Confidence 2111 1 123345556677666432 23588888 4555543
No 122
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=75.56 E-value=34 Score=28.42 Aligned_cols=187 Identities=9% Similarity=0.039 Sum_probs=92.6
Q ss_pred CCCEEEEEcccccce--eecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEEecccCCc
Q 047931 110 KPKIFFVLNPLTRES--KRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRVLASGYT 186 (339)
Q Consensus 110 ~~~~~~V~NP~T~~~--~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~ 186 (339)
....++++|+.+++. ..++..... ..++.+ ..+.+-+ ..........+.+|+..++.-...-.....
T Consensus 60 ~~~~i~~~d~~~~~~~~~~~~~~~~~--------~~~~~~s~dg~~l~--~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~ 129 (331)
T 3u4y_A 60 FCQTLVQIETQLEPPKVVAIQEGQSS--------MADVDITPDDQFAV--TVTGLNHPFNMQSYSFLKNKFISTIPIPYD 129 (331)
T ss_dssp TTCEEEEEECSSSSCEEEEEEECSSC--------CCCEEECTTSSEEE--ECCCSSSSCEEEEEETTTTEEEEEEECCTT
T ss_pred CCCeEEEEECCCCceeEEecccCCCC--------ccceEECCCCCEEE--EecCCCCcccEEEEECCCCCeEEEEECCCC
Confidence 356899999998874 222222211 222444 3333333 220111123789999887755332111110
Q ss_pred cCccCCCceEECCe-EEEEEecCCCCeEEEEEECCCce-ee---eecCCCCCCCCceeEEEEE-CCe-EEEEEeCCCeEE
Q 047931 187 RPLINVPGTLTNGA-LHWRLQKHGGDFVLAAFDLVEER-FK---EFPLPDASTSFRFFGTGVL-GDC-LCLQFFKGKMKE 259 (339)
Q Consensus 187 ~~~~~~~~v~~~G~-lyw~~~~~~~~~~il~fD~~~~~-~~---~i~lP~~~~~~~~~~l~~~-~G~-L~~v~~~~~~l~ 259 (339)
. ..-.+.-+|. +|...... .. .+..||+.... .. ...++... ....+... +|+ |++.......+.
T Consensus 130 --~-~~~~~spdg~~l~~~~~~~-~~-~i~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~spdg~~l~v~~~~~~~v~ 201 (331)
T 3u4y_A 130 --A-VGIAISPNGNGLILIDRSS-AN-TVRRFKIDADGVLFDTGQEFISGGT---RPFNITFTPDGNFAFVANLIGNSIG 201 (331)
T ss_dssp --E-EEEEECTTSSCEEEEEETT-TT-EEEEEEECTTCCEEEEEEEEECSSS---SEEEEEECTTSSEEEEEETTTTEEE
T ss_pred --c-cceEECCCCCEEEEEecCC-Cc-eEEEEEECCCCcEeecCCccccCCC---CccceEECCCCCEEEEEeCCCCeEE
Confidence 0 0111223565 44443332 11 25555554321 10 11112221 12233333 676 666555788899
Q ss_pred EEEEcccCCCCCe-EEEEEecCCCCeeEEEEEeCCeEEEEEC--CcEEEEEECCCCcEEEeE
Q 047931 260 HWIMKEYGVKESW-TRVFIHQDPNNVWPLCLWKNSTKLLVIN--RKNLLVCDCNNEGSEDVA 318 (339)
Q Consensus 260 iW~l~~~~~~~~W-~~~~~i~~~~~~~~~~~~~~~~i~~~~~--~~~~~~yd~~t~~~~~v~ 318 (339)
+|.++.. +. ..+.++.......-+++.++|+.++... +..+.++|+++++++.+.
T Consensus 202 v~d~~~~----~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~ 259 (331)
T 3u4y_A 202 ILETQNP----ENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVK 259 (331)
T ss_dssp EEECSST----TSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEE
T ss_pred EEECCCC----cccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeec
Confidence 9998752 22 1234444322244577888887555443 345999999999986664
No 123
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=75.53 E-value=39 Score=31.42 Aligned_cols=115 Identities=9% Similarity=-0.036 Sum_probs=62.8
Q ss_pred CCceEECCeEEEEEe-cCCCCeEEEEEEC-CCc--eeeeecCCCCCC-------CCceeEEEEECCeEEEEEeCCCeEEE
Q 047931 192 VPGTLTNGALHWRLQ-KHGGDFVLAAFDL-VEE--RFKEFPLPDAST-------SFRFFGTGVLGDCLCLQFFKGKMKEH 260 (339)
Q Consensus 192 ~~~v~~~G~lyw~~~-~~~~~~~il~fD~-~~~--~~~~i~lP~~~~-------~~~~~~l~~~~G~L~~v~~~~~~l~i 260 (339)
..++..+|.+|.... .+ .+.++|. ++. .|+. .++.... ......++..+|++++...+ .. +
T Consensus 56 ~~P~v~~g~vyv~~~~~~----~v~AlD~~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d-g~--l 127 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAFPN----NTYALNLNDPGKIVWQH-KPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQAN-GH--L 127 (571)
T ss_dssp SCCEEETTEEEEECSTTT----CEEEEETTCTTSEEEEE-CCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT-SE--E
T ss_pred cccEEECCEEEEEeCCCC----EEEEEeCCCCccEEEEE-cCCCCccccccccccccccccEEECCEEEEEeCC-CE--E
Confidence 457889999999876 44 7999998 654 4554 3332110 00112244567777665432 22 3
Q ss_pred EEEcccCCCCCeEEEEEec-C--CCCeeEEEEEeCCeEEEEEC------CcEEEEEECCCCcEEE
Q 047931 261 WIMKEYGVKESWTRVFIHQ-D--PNNVWPLCLWKNSTKLLVIN------RKNLLVCDCNNEGSED 316 (339)
Q Consensus 261 W~l~~~~~~~~W~~~~~i~-~--~~~~~~~~~~~~~~i~~~~~------~~~~~~yd~~t~~~~~ 316 (339)
..++-...+..|.....-. . .+...|+.. ++.+++... +..++.||.+|++...
T Consensus 128 ~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~--~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 190 (571)
T 2ad6_A 128 LALDAKTGKINWEVEVCDPKVGSTLTQAPFVA--KDTVLMGCSGAELGVRGAVNAFDLKTGELKW 190 (571)
T ss_dssp EEEETTTCCEEEEEECCCGGGTCBCCSCCEEE--TTEEEEECBCGGGTCCCEEEEEETTTCCEEE
T ss_pred EEEECCCCCEEEEecCCCCCccceeccCCEEE--CCEEEEEecCCccCCCCEEEEEECCCCcEEE
Confidence 4444222235676432110 0 111334432 556666544 4579999999998654
No 124
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=75.37 E-value=6.9 Score=34.13 Aligned_cols=102 Identities=10% Similarity=0.052 Sum_probs=43.9
Q ss_pred ECCeEEEEEecCCCCeEEEEEECCCceee-eecCCCCCCCCceeEEEEECCeEEEEEeCCCeEEEEEEcccCCCCCeEEE
Q 047931 197 TNGALHWRLQKHGGDFVLAAFDLVEERFK-EFPLPDASTSFRFFGTGVLGDCLCLQFFKGKMKEHWIMKEYGVKESWTRV 275 (339)
Q Consensus 197 ~~G~lyw~~~~~~~~~~il~fD~~~~~~~-~i~lP~~~~~~~~~~l~~~~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~ 275 (339)
.+|.+|.-...+ .+.++|.++.+.. .+..+... .....++.|++. ..+..+..|..+. .+..|...
T Consensus 91 ~~~~v~~g~~dg----~v~a~D~~tG~~~w~~~~~~~~------~~~p~~~~v~~~-~~dg~v~a~d~~t--G~~~W~~~ 157 (369)
T 2hz6_A 91 SDGILYMGKKQD----IWYVIDLLTGEKQQTLSSAFAD------SLSPSTSLLYLG-RTEYTITMYDTKT--RELRWNAT 157 (369)
T ss_dssp ----CCCCEEEE----EEEEECCC----------------------------EEEE-EEEEEEECCCSSS--SSCCCEEE
T ss_pred cCCEEEEEeCCC----EEEEEECCCCcEEEEecCCCcc------cccccCCEEEEE-ecCCEEEEEECCC--CCEEEeEe
Confidence 677777644443 7999999876532 22222211 111134444443 3334454454443 23568765
Q ss_pred EEecCCCCeeEEEEEe----CCeEEEEECCcEEEEEECCCCcEEE
Q 047931 276 FIHQDPNNVWPLCLWK----NSTKLLVINRKNLLVCDCNNEGSED 316 (339)
Q Consensus 276 ~~i~~~~~~~~~~~~~----~~~i~~~~~~~~~~~yd~~t~~~~~ 316 (339)
..-.. ..++.. ++.+++...++.++.+|.++++..+
T Consensus 158 ~~~~~-----~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W 197 (369)
T 2hz6_A 158 YFDYA-----ASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLW 197 (369)
T ss_dssp EEEEC-----CBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEE
T ss_pred ccccc-----CccccCCccccceEEEECCCCEEEEEECCCCcEEE
Confidence 32111 111111 2456666666789999999888543
No 125
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=74.69 E-value=37 Score=28.44 Aligned_cols=95 Identities=12% Similarity=0.066 Sum_probs=54.4
Q ss_pred CcEEEEEEeCC---CceEEecccCCccCccCCCceEE--CCeEEEEEecC--------CCCeEEEEEECCCceeeeecCC
Q 047931 164 NMSVAIFSLRM---NSWRRVLASGYTRPLINVPGTLT--NGALHWRLQKH--------GGDFVLAAFDLVEERFKEFPLP 230 (339)
Q Consensus 164 ~~~~~vyss~~---~~W~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~--------~~~~~il~fD~~~~~~~~i~lP 230 (339)
..++.+|+..+ +..+.....+- ..++.+ +|.+ |++... .....|..||...+....+..|
T Consensus 206 ~~~I~~~~~~~~~~~~~~~~~~~~g------P~gi~~d~~G~l-~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~ 278 (322)
T 2fp8_A 206 SHQIVKYWLEGPKKGTAEVLVKIPN------PGNIKRNADGHF-WVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLP 278 (322)
T ss_dssp GTEEEEEESSSTTTTCEEEEEECSS------EEEEEECTTSCE-EEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECC
T ss_pred CCeEEEEECCCCcCCccceEEeCCC------CCCeEECCCCCE-EEEecCcccccccCCCccEEEEECCCCCEEEEEECC
Confidence 34677777764 34444332211 123443 4774 554431 0124799999988878888877
Q ss_pred CCCCCCceeEEEEECCeEEEEEeCCCeEEEEEEcc
Q 047931 231 DASTSFRFFGTGVLGDCLCLQFFKGKMKEHWIMKE 265 (339)
Q Consensus 231 ~~~~~~~~~~l~~~~G~L~~v~~~~~~l~iW~l~~ 265 (339)
..........++..+|.|++.......+.+..++.
T Consensus 279 ~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 279 PPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp TTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC--
T ss_pred CCCccccceEEEEeCCEEEEeecCCCceEEEeccc
Confidence 64321122234456899998877777777777664
No 126
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=74.56 E-value=37 Score=28.40 Aligned_cols=191 Identities=6% Similarity=-0.053 Sum_probs=91.4
Q ss_pred eEEEccCCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEe-CCCcEEEEEEeCCC----ce
Q 047931 104 LVCTTPKPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGL-KPNMSVAIFSLRMN----SW 177 (339)
Q Consensus 104 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~-~~~~~~~vyss~~~----~W 177 (339)
+++....+..+.++|..+++....-..... ...+.+ ..+.+-+.... .. .....+.+|+..++ .+
T Consensus 88 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~--------v~~~~~~~~~~~l~~~~~-~~~~~~g~i~~~d~~~~~~~~~~ 158 (369)
T 3zwl_B 88 YCVTGSADYSIKLWDVSNGQCVATWKSPVP--------VKRVEFSPCGNYFLAILD-NVMKNPGSINIYEIERDSATHEL 158 (369)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEEEECSSC--------EEEEEECTTSSEEEEEEC-CBTTBCCEEEEEEEEECTTTCCE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEeecCCC--------eEEEEEccCCCEEEEecC-CccCCCCEEEEEEecCCccceee
Confidence 333333467888998888765443322222 444555 33444433332 10 11256777776543 22
Q ss_pred EEecccCCcc-Cc-c---CCCceE--ECCeEEEEEecCCCCeEEEEEECCC-ce-eeeecCCCCCCCCceeEEEEE-CCe
Q 047931 178 RRVLASGYTR-PL-I---NVPGTL--TNGALHWRLQKHGGDFVLAAFDLVE-ER-FKEFPLPDASTSFRFFGTGVL-GDC 247 (339)
Q Consensus 178 ~~~~~~~~~~-~~-~---~~~~v~--~~G~lyw~~~~~~~~~~il~fD~~~-~~-~~~i~lP~~~~~~~~~~l~~~-~G~ 247 (339)
......+... .. . ....+. -+|.....+... ..|..+|+.+ .+ ...+..... ....+... +|.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~----~v~~~~~~~~~~ 231 (369)
T 3zwl_B 159 TKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKD---GKISKYDVSNNYEYVDSIDLHEK----SISDMQFSPDLT 231 (369)
T ss_dssp EEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETT---SEEEEEETTTTTEEEEEEECCSS----CEEEEEECTTSS
T ss_pred cccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCC---CEEEEEECCCCcEeEEEEecCCC----ceeEEEECCCCC
Confidence 2221111100 00 0 001111 234444333332 4789999987 33 333332211 12233333 777
Q ss_pred EEEEEeCCCeEEEEEEcccCCCCCeEEEEEecCCCCeeEEEEEeCCeEEEEEC-Cc--------------EEEEEECCCC
Q 047931 248 LCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQDPNNVWPLCLWKNSTKLLVIN-RK--------------NLLVCDCNNE 312 (339)
Q Consensus 248 L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~i~~~~~-~~--------------~~~~yd~~t~ 312 (339)
+.++...+..+.+|.++.. + ....+........+++.+++..++... +. .+..||.+++
T Consensus 232 ~l~~~~~d~~i~v~d~~~~----~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 305 (369)
T 3zwl_B 232 YFITSSRDTNSFLVDVSTL----Q--VLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFE 305 (369)
T ss_dssp EEEEEETTSEEEEEETTTC----C--EEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTC
T ss_pred EEEEecCCceEEEEECCCC----c--eeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCC
Confidence 7776678889999988752 1 222232221244555555554444332 22 5888898887
Q ss_pred cEEE
Q 047931 313 GSED 316 (339)
Q Consensus 313 ~~~~ 316 (339)
+...
T Consensus 306 ~~~~ 309 (369)
T 3zwl_B 306 EEIG 309 (369)
T ss_dssp CEEE
T ss_pred cchh
Confidence 7543
No 127
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=74.49 E-value=44 Score=29.31 Aligned_cols=56 Identities=5% Similarity=-0.102 Sum_probs=31.5
Q ss_pred CCeEEEEEEcccCCCCCeEEEEEecC-C-CC-eeEEEEEeCCeEEEEECCcEEEEEECCCCcEEE
Q 047931 255 GKMKEHWIMKEYGVKESWTRVFIHQD-P-NN-VWPLCLWKNSTKLLVINRKNLLVCDCNNEGSED 316 (339)
Q Consensus 255 ~~~l~iW~l~~~~~~~~W~~~~~i~~-~-~~-~~~~~~~~~~~i~~~~~~~~~~~yd~~t~~~~~ 316 (339)
...+.||..+. ++ .+..+.. . -+ ....++.++|.++....++.+.+||+++++.++
T Consensus 377 ~~~i~iwd~~~----g~--~~~~l~~~~~~~v~s~~~fspdg~~lasg~d~~i~iW~~~~gk~rK 435 (435)
T 4e54_B 377 LRTIDVFDGNS----GK--MMCQLYDPESSGISSLNEFNPMGDTLASAMGYHILIWSQQEARTRK 435 (435)
T ss_dssp CCCEEEECSSS----CC--EEEEECCSSCCCCCCEEEECTTSSCEEEECSSEEEECCCC------
T ss_pred CCEEEEEECCC----Cc--EEEEEeCCCCCcEEEEEEECCCCCEEEEEcCCcEEEEECCcCeeeC
Confidence 45688887654 21 2233322 1 11 334467788888877777789999999988654
No 128
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=74.48 E-value=35 Score=28.17 Aligned_cols=186 Identities=9% Similarity=-0.032 Sum_probs=93.4
Q ss_pred eEEEccCCCEEEEEcccccceee-cCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEEec
Q 047931 104 LVCTTPKPKIFFVLNPLTRESKR-IPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRVL 181 (339)
Q Consensus 104 Ll~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~ 181 (339)
++.....+..+.|+|..|++... +..-... ...+.+ ..+.+-+.+- ....+.+++.+++ +....
T Consensus 69 ~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~--------v~~~~~~~~~~~l~sgs-----~D~~v~lWd~~~~-~~~~~ 134 (304)
T 2ynn_A 69 WIIVGSDDFRIRVFNYNTGEKVVDFEAHPDY--------IRSIAVHPTKPYVLSGS-----DDLTVKLWNWENN-WALEQ 134 (304)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSSC--------EEEEEECSSSSEEEEEE-----TTSCEEEEEGGGT-TEEEE
T ss_pred EEEEECCCCEEEEEECCCCcEEEEEeCCCCc--------EEEEEEcCCCCEEEEEC-----CCCeEEEEECCCC-cchhh
Confidence 33333456789999998876532 2211111 445555 3344333222 2456777877654 11111
Q ss_pred ccCCccCccCCCceEE---CCeEEEEEecCCCCeEEEEEECCCceeee-ecCCCCCCCCceeEEEEE---CCeEEEEEeC
Q 047931 182 ASGYTRPLINVPGTLT---NGALHWRLQKHGGDFVLAAFDLVEERFKE-FPLPDASTSFRFFGTGVL---GDCLCLQFFK 254 (339)
Q Consensus 182 ~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~il~fD~~~~~~~~-i~lP~~~~~~~~~~l~~~---~G~L~~v~~~ 254 (339)
.+.... ..-..+.+ +|.+...+..+ ..|..+|+.+.+-.. +...... ....+... ++.+.+....
T Consensus 135 ~~~~h~--~~v~~v~~~p~~~~~l~sgs~D---~~v~iwd~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~l~s~s~ 206 (304)
T 2ynn_A 135 TFEGHE--HFVMCVAFNPKDPSTFASGCLD---RTVKVWSLGQSTPNFTLTTGQER---GVNYVDYYPLPDKPYMITASD 206 (304)
T ss_dssp EECCCC--SCEEEEEECTTCTTEEEEEETT---SEEEEEETTCSSCSEEEECCCTT---CEEEEEECCSTTCCEEEEEET
T ss_pred hhcccC--CcEEEEEECCCCCCEEEEEeCC---CeEEEEECCCCCccceeccCCcC---cEEEEEEEEcCCCCEEEEEcC
Confidence 111000 00112222 23333333332 478888886543221 1111111 11112221 5566666668
Q ss_pred CCeEEEEEEcccCCCCCeEEEEEecCC-CCeeEEEEEeCCeEEEEE-CCcEEEEEECCCCcEEEe
Q 047931 255 GKMKEHWIMKEYGVKESWTRVFIHQDP-NNVWPLCLWKNSTKLLVI-NRKNLLVCDCNNEGSEDV 317 (339)
Q Consensus 255 ~~~l~iW~l~~~~~~~~W~~~~~i~~~-~~~~~~~~~~~~~i~~~~-~~~~~~~yd~~t~~~~~v 317 (339)
+..+.||.++. -..+.++... -.+.-+++.+++.+++.. .++.+..||.++.+..+.
T Consensus 207 D~~i~iWd~~~------~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~ 265 (304)
T 2ynn_A 207 DLTIKIWDYQT------KSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKT 265 (304)
T ss_dssp TSEEEEEETTT------TEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred CCeEEEEeCCC------CccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeee
Confidence 88999998874 2234455432 225566777787766654 455699999999886543
No 129
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=74.46 E-value=33 Score=27.82 Aligned_cols=192 Identities=12% Similarity=0.042 Sum_probs=97.2
Q ss_pred eeCceEEEcc-CCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCce
Q 047931 100 SCNGLVCTTP-KPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSW 177 (339)
Q Consensus 100 s~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W 177 (339)
..+|-+.+.. ....++++||. ++...++.+... ....++.+ ..+..-+. . .....+..|+.. +..
T Consensus 70 ~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~------~~~~~i~~~~~g~l~v~--~---~~~~~i~~~~~~-g~~ 136 (300)
T 2qc5_A 70 SSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPD------SGPYGITEGLNGDIWFT--Q---LNGDRIGKLTAD-GTI 136 (300)
T ss_dssp CTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTT------CCEEEEEECSTTCEEEE--E---TTTTEEEEECTT-SCE
T ss_pred CCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCC------CCCccceECCCCCEEEE--c---cCCCeEEEECCC-CCE
Confidence 3456554443 35678899988 665544322111 11334444 22322111 1 113355666655 544
Q ss_pred EEecccCCccCccCCCceEE--CCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCeEEEEEeC
Q 047931 178 RRVLASGYTRPLINVPGTLT--NGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDCLCLQFFK 254 (339)
Q Consensus 178 ~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~L~~v~~~ 254 (339)
.... .+... ....++.+ +|.+|+..... ..|..+|. +.++..+.+|.... ....+... +|.|++....
T Consensus 137 ~~~~-~~~~~--~~~~~i~~d~~g~l~v~~~~~---~~i~~~~~-~g~~~~~~~~~~~~--~~~~i~~d~~g~l~v~~~~ 207 (300)
T 2qc5_A 137 YEYD-LPNKG--SYPAFITLGSDNALWFTENQN---NSIGRITN-TGKLEEYPLPTNAA--APVGITSGNDGALWFVEIM 207 (300)
T ss_dssp EEEE-CSSTT--CCEEEEEECTTSSEEEEETTT---TEEEEECT-TCCEEEEECSSTTC--CEEEEEECTTSSEEEEETT
T ss_pred EEcc-CCCCC--CCceeEEECCCCCEEEEecCC---CeEEEECC-CCcEEEeeCCCCCC--CcceEEECCCCCEEEEccC
Confidence 4332 11110 11122333 57866554332 47999999 66666666654432 22344444 7888887765
Q ss_pred CCeEEEEEEcccCCCCCeEEEEEecCCC-CeeEEEEEeCCeEEEEEC-CcEEEEEECCCCcEEEeEEe
Q 047931 255 GKMKEHWIMKEYGVKESWTRVFIHQDPN-NVWPLCLWKNSTKLLVIN-RKNLLVCDCNNEGSEDVAVA 320 (339)
Q Consensus 255 ~~~l~iW~l~~~~~~~~W~~~~~i~~~~-~~~~~~~~~~~~i~~~~~-~~~~~~yd~~t~~~~~v~~~ 320 (339)
...+.++.. . .+... ..++... ...-+++..+|.+++... ...+..||+ +++++.+.+.
T Consensus 208 ~~~i~~~~~--~---g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~ 268 (300)
T 2qc5_A 208 GNKIGRITT--T---GEISE-YDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQEYQLQ 268 (300)
T ss_dssp TTEEEEECT--T---CCEEE-EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEEEEECC
T ss_pred CCEEEEEcC--C---CcEEE-EECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEEEEECC
Confidence 555554433 1 23332 2232222 133445556777777664 357999999 5666666544
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=73.53 E-value=56 Score=30.04 Aligned_cols=190 Identities=6% Similarity=-0.109 Sum_probs=98.4
Q ss_pred CceEEEcc-CCCEEEEEccccccee-ecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEe--CCCc
Q 047931 102 NGLVCTTP-KPKIFFVLNPLTRESK-RIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSL--RMNS 176 (339)
Q Consensus 102 ~GLl~~~~-~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss--~~~~ 176 (339)
+|.++... .+..+.|+|+.|++.. .++... ...++.+ ..+.|-.+.-. .-.+.+|+. .++.
T Consensus 148 ~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~---------~~~~v~~spdg~~l~v~~~-----d~~V~v~D~~~~t~~ 213 (543)
T 1nir_A 148 PNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY---------AVHISRMSASGRYLLVIGR-----DARIDMIDLWAKEPT 213 (543)
T ss_dssp GGEEEEEEGGGTEEEEEETTTCCEEEEEECST---------TEEEEEECTTSCEEEEEET-----TSEEEEEETTSSSCE
T ss_pred CCEEEEEEcCCCeEEEEECCCceEEEEEecCc---------ccceEEECCCCCEEEEECC-----CCeEEEEECcCCCCc
Confidence 55554443 4568999999998753 332111 1334445 34444433321 267888888 5543
Q ss_pred eEEecccCCccCccCCCceEE------CCeEEEEEecCCCCeEEEEEECCCcee-eeecCCCCCC-------CCceeEEE
Q 047931 177 WRRVLASGYTRPLINVPGTLT------NGALHWRLQKHGGDFVLAAFDLVEERF-KEFPLPDAST-------SFRFFGTG 242 (339)
Q Consensus 177 W~~~~~~~~~~~~~~~~~v~~------~G~lyw~~~~~~~~~~il~fD~~~~~~-~~i~lP~~~~-------~~~~~~l~ 242 (339)
.+..++... .. .++.+ +|..-+.+... ...|..+|..+.+. ..++.+.... ...-..+.
T Consensus 214 --~~~~i~~g~--~p-~~va~sp~~~~dg~~l~v~~~~--~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~ 286 (543)
T 1nir_A 214 --KVAEIKIGI--EA-RSVESSKFKGYEDRYTIAGAYW--PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAII 286 (543)
T ss_dssp --EEEEEECCS--EE-EEEEECCSTTCTTTEEEEEEEE--SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEE
T ss_pred --EEEEEecCC--Cc-ceEEeCCCcCCCCCEEEEEEcc--CCeEEEEeccccccceeecccCcccCccccccCCceEEEE
Confidence 222222211 01 12222 56544443321 14788999988654 4445432110 00112333
Q ss_pred EE-CCeEEEEEe-CCCeEEEEEEcccCCCCCeEEEEEecCCCCeeEEEEEeCCeEEEEEC--CcEEEEEECCCCcEEE
Q 047931 243 VL-GDCLCLQFF-KGKMKEHWIMKEYGVKESWTRVFIHQDPNNVWPLCLWKNSTKLLVIN--RKNLLVCDCNNEGSED 316 (339)
Q Consensus 243 ~~-~G~L~~v~~-~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~i~~~~~--~~~~~~yd~~t~~~~~ 316 (339)
.. +|..+++.. ....+.+|.+.+.. . .++.++...-...-+++.++|+.++... +..+.++|.+++++..
T Consensus 287 ~s~~~~~~~vs~~~~g~i~vvd~~~~~--~--l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~ 360 (543)
T 1nir_A 287 ASHEHPEFIVNVKETGKVLLVNYKDID--N--LTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSA 360 (543)
T ss_dssp ECSSSSEEEEEETTTTEEEEEECTTSS--S--CEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred ECCCCCEEEEEECCCCeEEEEEecCCC--c--ceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEE
Confidence 33 455555555 67788888776532 1 1233444321144567888887555442 4569999999998654
No 131
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=73.23 E-value=45 Score=28.81 Aligned_cols=96 Identities=7% Similarity=-0.063 Sum_probs=57.0
Q ss_pred eEEEEEECCCcee-eeecCCCCCCCCceeEEEEE-CCeEEEEEe--CCCeEEEEEEcccCCCCCeEEEEEecCC-CCeeE
Q 047931 212 FVLAAFDLVEERF-KEFPLPDASTSFRFFGTGVL-GDCLCLQFF--KGKMKEHWIMKEYGVKESWTRVFIHQDP-NNVWP 286 (339)
Q Consensus 212 ~~il~fD~~~~~~-~~i~lP~~~~~~~~~~l~~~-~G~L~~v~~--~~~~l~iW~l~~~~~~~~W~~~~~i~~~-~~~~~ 286 (339)
..|..+|+.+.+. ..+..+.. ...+... +|+..++.. .+..+.||.++. ........+... -.+.-
T Consensus 284 ~~i~i~d~~~~~~~~~~~~~~~-----v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~----~~~~~~~~~~~h~~~v~~ 354 (401)
T 4aez_A 284 KQIHFWNAATGARVNTVDAGSQ-----VTSLIWSPHSKEIMSTHGFPDNNLSIWSYSS----SGLTKQVDIPAHDTRVLY 354 (401)
T ss_dssp CEEEEEETTTCCEEEEEECSSC-----EEEEEECSSSSEEEEEECTTTCEEEEEEEET----TEEEEEEEEECCSSCCCE
T ss_pred CEEEEEECCCCCEEEEEeCCCc-----EEEEEECCCCCeEEEEeecCCCcEEEEecCC----ccceeEEEecCCCCCEEE
Confidence 4788889887653 33332211 2223333 666666643 788999999985 335555555432 22556
Q ss_pred EEEEeCCeEEEEE-CCcEEEEEECCCCcEEE
Q 047931 287 LCLWKNSTKLLVI-NRKNLLVCDCNNEGSED 316 (339)
Q Consensus 287 ~~~~~~~~i~~~~-~~~~~~~yd~~t~~~~~ 316 (339)
+++.++|..++.. .++.+.+||+.+++...
T Consensus 355 ~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~ 385 (401)
T 4aez_A 355 SALSPDGRILSTAASDENLKFWRVYDGDHVK 385 (401)
T ss_dssp EEECTTSSEEEEECTTSEEEEEECCC-----
T ss_pred EEECCCCCEEEEEeCCCcEEEEECCCCcccc
Confidence 6777788766655 45679999999887543
No 132
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=72.77 E-value=39 Score=27.90 Aligned_cols=139 Identities=9% Similarity=-0.046 Sum_probs=79.1
Q ss_pred CcEEEEEEeCCCceEEecccCCccCccCCCceEECCeEEEEEecCCCCeEEEEEECCCce-eeeecCCCCCCCCceeEEE
Q 047931 164 NMSVAIFSLRMNSWRRVLASGYTRPLINVPGTLTNGALHWRLQKHGGDFVLAAFDLVEER-FKEFPLPDASTSFRFFGTG 242 (339)
Q Consensus 164 ~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~~~-~~~i~lP~~~~~~~~~~l~ 242 (339)
...+.+++.+++.=.....++.. .....-...++.+|-+.... ..+.+||.++.+ ...++.|... ..|+
T Consensus 64 ~S~v~~vD~~Tgkv~~~~~l~~~--~FgeGit~~g~~ly~ltw~~---~~v~v~D~~t~~~~~ti~~~~eG-----~glt 133 (262)
T 3nol_A 64 RSSIRKVDIESGKTLQQIELGKR--YFGEGISDWKDKIVGLTWKN---GLGFVWNIRNLRQVRSFNYDGEG-----WGLT 133 (262)
T ss_dssp EEEEEEECTTTCCEEEEEECCTT--CCEEEEEEETTEEEEEESSS---SEEEEEETTTCCEEEEEECSSCC-----CCEE
T ss_pred CceEEEEECCCCcEEEEEecCCc--cceeEEEEeCCEEEEEEeeC---CEEEEEECccCcEEEEEECCCCc-----eEEe
Confidence 46788888888743222122221 11122245677888887654 589999998754 5667776422 2344
Q ss_pred EECCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecC-----CCC-eeEEEEEeCCeEEEEEC-CcEEEEEECCCCcEE
Q 047931 243 VLGDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQD-----PNN-VWPLCLWKNSTKLLVIN-RKNLLVCDCNNEGSE 315 (339)
Q Consensus 243 ~~~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~-----~~~-~~~~~~~~~~~i~~~~~-~~~~~~yd~~t~~~~ 315 (339)
.-+++|++... .. .||.++-. +=..+.+|.. ++. ..-+.. .+|+++.... ...+.+.|++|++..
T Consensus 134 ~dg~~L~~SdG-s~--~i~~iDp~----T~~v~~~I~V~~~g~~~~~lNELe~-~~G~lyan~w~~~~I~vIDp~tG~V~ 205 (262)
T 3nol_A 134 HNDQYLIMSDG-TP--VLRFLDPE----SLTPVRTITVTAHGEELPELNELEW-VDGEIFANVWQTNKIVRIDPETGKVT 205 (262)
T ss_dssp ECSSCEEECCS-SS--EEEEECTT----TCSEEEEEECEETTEECCCEEEEEE-ETTEEEEEETTSSEEEEECTTTCBEE
T ss_pred cCCCEEEEECC-CC--eEEEEcCC----CCeEEEEEEeccCCccccccceeEE-ECCEEEEEEccCCeEEEEECCCCcEE
Confidence 44566666543 23 46777742 2223444433 111 111333 3778777653 457999999999964
Q ss_pred -EeEEe
Q 047931 316 -DVAVA 320 (339)
Q Consensus 316 -~v~~~ 320 (339)
++.+.
T Consensus 206 ~~Id~~ 211 (262)
T 3nol_A 206 GIIDLN 211 (262)
T ss_dssp EEEECT
T ss_pred EEEECC
Confidence 66664
No 133
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=72.34 E-value=36 Score=32.32 Aligned_cols=115 Identities=10% Similarity=0.045 Sum_probs=61.5
Q ss_pred CCceEECCeEEEEEecCCCCeEEEEEECCCc--eeeeecCCCCCC-------CCceeEEEEECCeEEEEEeCCCeEEEEE
Q 047931 192 VPGTLTNGALHWRLQKHGGDFVLAAFDLVEE--RFKEFPLPDAST-------SFRFFGTGVLGDCLCLQFFKGKMKEHWI 262 (339)
Q Consensus 192 ~~~v~~~G~lyw~~~~~~~~~~il~fD~~~~--~~~~i~lP~~~~-------~~~~~~l~~~~G~L~~v~~~~~~l~iW~ 262 (339)
..++..+|.+|.....+ .+.++|.++. .|+. ..+.... ......++..+|++++... +.. |..
T Consensus 60 ~~P~v~~g~vyv~~~~~----~v~AlD~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-dg~--l~a 131 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMSWS----RVIAVDAASGKELWRY-DPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL-DGR--LIA 131 (668)
T ss_dssp CCCEEETTEEEEEEGGG----EEEEEETTTCCEEEEE-CCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT-TSE--EEE
T ss_pred cCCEEECCEEEEECCCC----eEEEEECCCChhceEE-CCCCCccccccccccCCccceEEECCEEEEEcC-CCE--EEE
Confidence 45688999999987765 8999998764 4554 2221110 0011223445777665432 233 334
Q ss_pred EcccCCCCCeEEEEEecC---CCCeeEEEEEeCCeEEEEEC------CcEEEEEECCCCcEEE
Q 047931 263 MKEYGVKESWTRVFIHQD---PNNVWPLCLWKNSTKLLVIN------RKNLLVCDCNNEGSED 316 (339)
Q Consensus 263 l~~~~~~~~W~~~~~i~~---~~~~~~~~~~~~~~i~~~~~------~~~~~~yd~~t~~~~~ 316 (339)
++-...+..|.....-.. .....|+.. ++.+++... +..++.||.+|++...
T Consensus 132 lD~~tG~~~W~~~~~~~~~~~~~~~~P~v~--~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 192 (668)
T 1kv9_A 132 LDAKTGKAIWSQQTTDPAKPYSITGAPRVV--KGKVIIGNGGAEYGVRGFVSAYDADTGKLAW 192 (668)
T ss_dssp EETTTCCEEEEEECSCTTSSCBCCSCCEEE--TTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred EECCCCCEeeeeccCCCCCcceecCCCEEE--CCEEEEeCCCCCcCCCCEEEEEECCCCcEEE
Confidence 442212356765321110 111234332 555655433 2469999999998654
No 134
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=72.22 E-value=42 Score=28.07 Aligned_cols=128 Identities=13% Similarity=0.205 Sum_probs=68.6
Q ss_pred CcEEEEEEeCCCceEE-ecccCCccCccCCCceEE--CCeEEEEEecCCCCeEEEEEECCCceeee-ecCCCCCCCCcee
Q 047931 164 NMSVAIFSLRMNSWRR-VLASGYTRPLINVPGTLT--NGALHWRLQKHGGDFVLAAFDLVEERFKE-FPLPDASTSFRFF 239 (339)
Q Consensus 164 ~~~~~vyss~~~~W~~-~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~~~~~~-i~lP~~~~~~~~~ 239 (339)
...+.+|+.+++.-.. +..... .-..+.+ +|.+...+..+ ..|..+|+.+.+... +..... ...
T Consensus 185 dg~i~iwd~~~~~~~~~~~~h~~-----~v~~l~~spd~~~l~s~s~d---g~i~iwd~~~~~~~~~~~~h~~----~v~ 252 (321)
T 3ow8_A 185 DGIINIFDIATGKLLHTLEGHAM-----PIRSLTFSPDSQLLVTASDD---GYIKIYDVQHANLAGTLSGHAS----WVL 252 (321)
T ss_dssp TSCEEEEETTTTEEEEEECCCSS-----CCCEEEECTTSCEEEEECTT---SCEEEEETTTCCEEEEECCCSS----CEE
T ss_pred CCeEEEEECCCCcEEEEEcccCC-----ceeEEEEcCCCCEEEEEcCC---CeEEEEECCCcceeEEEcCCCC----ceE
Confidence 4467888887764221 211111 1112222 45443333332 468889988765432 221111 122
Q ss_pred EEEEE-CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecC-CCCeeEEEEEeCCeEEEEE-CCcEEEEEEC
Q 047931 240 GTGVL-GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQD-PNNVWPLCLWKNSTKLLVI-NRKNLLVCDC 309 (339)
Q Consensus 240 ~l~~~-~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~-~~~~~~~~~~~~~~i~~~~-~~~~~~~yd~ 309 (339)
.+.-. +|...+....+..+.||.++. ...+.++.. .-.+.-+++.++|..++.. .++.+.+||.
T Consensus 253 ~~~~sp~~~~l~s~s~D~~v~iwd~~~------~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 253 NVAFCPDDTHFVSSSSDKSVKVWDVGT------RTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTT------TEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred EEEECCCCCEEEEEeCCCcEEEEeCCC------CEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 33333 677766666888999998874 234455533 2235566777777655544 4556888885
No 135
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=72.03 E-value=46 Score=28.35 Aligned_cols=140 Identities=9% Similarity=0.004 Sum_probs=70.3
Q ss_pred CcEEEEEEeCCCceEEecccCCccCccCCCceEECCeEEEEEecCCCCeEEEEEECCCceee-eecCCCCCCCCceeEEE
Q 047931 164 NMSVAIFSLRMNSWRRVLASGYTRPLINVPGTLTNGALHWRLQKHGGDFVLAAFDLVEERFK-EFPLPDASTSFRFFGTG 242 (339)
Q Consensus 164 ~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~~~~~-~i~lP~~~~~~~~~~l~ 242 (339)
...+.+|+..++.-...-..+.........+..-++.+...+... ..|..+|+.+.+.. .+..... ....+.
T Consensus 121 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~d~~~~~~~~~~~~~~~----~v~~~~ 193 (408)
T 4a11_B 121 DKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRG---PKVQLCDLKSGSCSHILQGHRQ----EILAVS 193 (408)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESS---SSEEEEESSSSCCCEEECCCCS----CEEEEE
T ss_pred CCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCC---CeEEEEeCCCcceeeeecCCCC----cEEEEE
Confidence 456888888776543332211110000000011123333333332 46888888876432 2221111 122333
Q ss_pred EE-CCe-EEEEEeCCCeEEEEEEcccCCCCCeEEEEEec---------------C-CCCeeEEEEEeCCeEEEE-ECCcE
Q 047931 243 VL-GDC-LCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQ---------------D-PNNVWPLCLWKNSTKLLV-INRKN 303 (339)
Q Consensus 243 ~~-~G~-L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~---------------~-~~~~~~~~~~~~~~i~~~-~~~~~ 303 (339)
.. +|. +.++...+..+.+|.++.... .. ..+. . .-.+.-+++.++++.++. ..++.
T Consensus 194 ~~~~~~~ll~~~~~dg~i~i~d~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 268 (408)
T 4a11_B 194 WSPRYDYILATASADSRVKLWDVRRASG--CL---ITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNR 268 (408)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTCSSC--CS---EECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred ECCCCCcEEEEEcCCCcEEEEECCCCCc--cc---ccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCe
Confidence 33 555 566666888899999875321 11 1110 0 012556677777765554 45667
Q ss_pred EEEEECCCCcEE
Q 047931 304 LLVCDCNNEGSE 315 (339)
Q Consensus 304 ~~~yd~~t~~~~ 315 (339)
+..||+++++..
T Consensus 269 i~vwd~~~~~~~ 280 (408)
T 4a11_B 269 MRLWNSSNGENT 280 (408)
T ss_dssp EEEEETTTCCBC
T ss_pred EEEEECCCCccc
Confidence 999999987743
No 136
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=71.33 E-value=41 Score=27.57 Aligned_cols=192 Identities=9% Similarity=-0.004 Sum_probs=93.0
Q ss_pred CCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEeeeCC-ceEEEEEeeEeCCCcEEEEEEeCCCceEEe-cccCCcc
Q 047931 110 KPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGCTAE-DCKFIKVSFGLKPNMSVAIFSLRMNSWRRV-LASGYTR 187 (339)
Q Consensus 110 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~-~ykvv~~~~~~~~~~~~~vyss~~~~W~~~-~~~~~~~ 187 (339)
....++++||.+++...+..+... .......++.+..+ ....+. . . ...+.+|+.. +..+.+ .......
T Consensus 44 ~~~~i~~~d~~~g~~~~~~~~~~~---~~~~~~~~i~~~~~~g~l~v~-~--~--~~~l~~~d~~-g~~~~~~~~~~~~~ 114 (314)
T 1pjx_A 44 PAGEILRIDLKTGKKTVICKPEVN---GYGGIPAGCQCDRDANQLFVA-D--M--RLGLLVVQTD-GTFEEIAKKDSEGR 114 (314)
T ss_dssp ECCEEEEECTTTCCEEEEECCEET---TEECCEEEEEECSSSSEEEEE-E--T--TTEEEEEETT-SCEEECCSBCTTSC
T ss_pred CCCEEEEEeCCCCcEEEEEecccC---CCCCCCceEEEecCCCcEEEE-E--C--CCCEEEEeCC-CCEEEEEeccCCCc
Confidence 356788999988887655431100 00001334444222 222222 1 1 2267788877 666554 3221111
Q ss_pred CccCCCceEE--CCeEEEEEecC------------CCCeEEEEEECCCceeeeecCCCCCCCCceeEEEE-----ECC-e
Q 047931 188 PLINVPGTLT--NGALHWRLQKH------------GGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGV-----LGD-C 247 (339)
Q Consensus 188 ~~~~~~~v~~--~G~lyw~~~~~------------~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~-----~~G-~ 247 (339)
.......+.+ +|.+|+..... .....|..+|.. .++..+.- ... ....++. -+| .
T Consensus 115 ~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~--~~~--~~~~i~~~~~~d~dg~~ 189 (314)
T 1pjx_A 115 RMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT--AFQ--FPNGIAVRHMNDGRPYQ 189 (314)
T ss_dssp BCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE--EES--SEEEEEEEECTTSCEEE
T ss_pred cccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc--CCC--CcceEEEecccCCCCCE
Confidence 1111223443 57776554321 012578999987 55544311 110 1112232 345 4
Q ss_pred EEEEEeCCCeEEEEEEcccCCCCCeEEEE---EecCC--CCeeEEEEEeCCeEEEEE-CCcEEEEEECCCCc-EEEeE
Q 047931 248 LCLQFFKGKMKEHWIMKEYGVKESWTRVF---IHQDP--NNVWPLCLWKNSTKLLVI-NRKNLLVCDCNNEG-SEDVA 318 (339)
Q Consensus 248 L~~v~~~~~~l~iW~l~~~~~~~~W~~~~---~i~~~--~~~~~~~~~~~~~i~~~~-~~~~~~~yd~~t~~-~~~v~ 318 (339)
|++.......+.+|.++.. .+..... .+... -...-+++..+|.+++.. .+..+..||+++++ .+.+.
T Consensus 190 l~v~~~~~~~i~~~~~~~~---g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~ 264 (314)
T 1pjx_A 190 LIVAETPTKKLWSYDIKGP---AKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIR 264 (314)
T ss_dssp EEEEETTTTEEEEEEEEET---TEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEE
T ss_pred EEEEECCCCeEEEEECCCC---CccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEe
Confidence 6665556778888877631 2233222 22211 112334555677777765 45679999999554 44443
No 137
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=70.20 E-value=52 Score=28.30 Aligned_cols=107 Identities=7% Similarity=-0.013 Sum_probs=62.8
Q ss_pred CCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEE
Q 047931 198 NGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVF 276 (339)
Q Consensus 198 ~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~ 276 (339)
+|.....+... ..|..+|+.+.+.....-.... .-..+.-. +|++.+....+..+.+|.++... . ..
T Consensus 108 ~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~--~----~~ 175 (420)
T 3vl1_A 108 QMRRFILGTTE---GDIKVLDSNFNLQREIDQAHVS---EITKLKFFPSGEALISSSQDMQLKIWSVKDGS--N----PR 175 (420)
T ss_dssp SSCEEEEEETT---SCEEEECTTSCEEEEETTSSSS---CEEEEEECTTSSEEEEEETTSEEEEEETTTCC--C----CE
T ss_pred CCCEEEEEECC---CCEEEEeCCCcceeeecccccC---ccEEEEECCCCCEEEEEeCCCeEEEEeCCCCc--C----ce
Confidence 44444444332 4688888887765544211111 12233333 77777766688899999988532 1 12
Q ss_pred EecC-CCCeeEEEEEeCCeEEEE-ECCcEEEEEECCCCcEEE
Q 047931 277 IHQD-PNNVWPLCLWKNSTKLLV-INRKNLLVCDCNNEGSED 316 (339)
Q Consensus 277 ~i~~-~~~~~~~~~~~~~~i~~~-~~~~~~~~yd~~t~~~~~ 316 (339)
++.. .-.+.-+++.+++..++. ..++.+..||+++++...
T Consensus 176 ~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~ 217 (420)
T 3vl1_A 176 TLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIH 217 (420)
T ss_dssp EEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEE
T ss_pred EEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeE
Confidence 3322 122566777777765554 445679999999887543
No 138
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=69.92 E-value=76 Score=30.03 Aligned_cols=189 Identities=13% Similarity=0.042 Sum_probs=97.9
Q ss_pred EEEEEcccccce--eecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEEecccCCccCc
Q 047931 113 IFFVLNPLTRES--KRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRVLASGYTRPL 189 (339)
Q Consensus 113 ~~~V~NP~T~~~--~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~~~~ 189 (339)
++++++.-|++. +.+-..+.. .....+..+ .++.|-++... .......+.+.+..++.|+.+..-...
T Consensus 203 ~v~~~~l~t~~~~~~lv~~~~~~-----~~~~~~~~~SpDG~~l~~~~~-~~~~~~~l~~~~~~~~~~~~l~~~~~~--- 273 (695)
T 2bkl_A 203 TIRYHTLGTEPSKDTVVHERTGD-----PTTFLQSDLSRDGKYLFVYIL-RGWSENDVYWKRPGEKDFRLLVKGVGA--- 273 (695)
T ss_dssp EEEEEETTSCGGGCEEEECCCCC-----TTCEEEEEECTTSCCEEEEEE-ETTTEEEEEEECTTCSSCEEEEECSSC---
T ss_pred EEEEEECCCCchhceEEEecCCC-----CEEEEEEEECCCCCEEEEEEe-CCCCceEEEEEcCCCCceEEeecCCCc---
Confidence 488888777663 222221111 001334445 44556555443 111233455555556778877432111
Q ss_pred cCCCceEECCeEEEEEecCCCCeEEEEEECCCce---eeeecCCCCCCCCceeEEEEECCeEEEEEeCCCeEEEEEEccc
Q 047931 190 INVPGTLTNGALHWRLQKHGGDFVLAAFDLVEER---FKEFPLPDASTSFRFFGTGVLGDCLCLQFFKGKMKEHWIMKEY 266 (339)
Q Consensus 190 ~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~~~---~~~i~lP~~~~~~~~~~l~~~~G~L~~v~~~~~~l~iW~l~~~ 266 (339)
....+.-+|.+|...........|..+|+.+.+ |+.+-.+.... .-..+...+|.|.+....+....||.++-.
T Consensus 274 -~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~--~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~ 350 (695)
T 2bkl_A 274 -KYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSA--SLLSVSIVGGHLSLEYLKDATSEVRVATLK 350 (695)
T ss_dssp -CEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSC--EEEEEEEETTEEEEEEEETTEEEEEEEETT
T ss_pred -eEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCC--eEEEEEEECCEEEEEEEECCEEEEEEEeCC
Confidence 112344577755554422335789999997754 55553222111 112234458888887777788889988732
Q ss_pred CCCCCeEEEEEecCC-CC-eeEEEEEeCC-eEEEEECC----cEEEEEECCCCcEEEeE
Q 047931 267 GVKESWTRVFIHQDP-NN-VWPLCLWKNS-TKLLVINR----KNLLVCDCNNEGSEDVA 318 (339)
Q Consensus 267 ~~~~~W~~~~~i~~~-~~-~~~~~~~~~~-~i~~~~~~----~~~~~yd~~t~~~~~v~ 318 (339)
+ . ...++..+ .+ ...+++.+++ .+++...+ ..++.||+++++.+.+.
T Consensus 351 g--~---~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~ 404 (695)
T 2bkl_A 351 G--K---PVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELWA 404 (695)
T ss_dssp C--C---EEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEEE
T ss_pred C--C---eeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEe
Confidence 2 1 22344332 21 1222333455 45544322 35999999998876653
No 139
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=69.76 E-value=57 Score=29.10 Aligned_cols=67 Identities=10% Similarity=0.101 Sum_probs=43.8
Q ss_pred CCeEEEEEeC-------CCeEEEEEEcccCCCCCeEEEEEecCCCCeeEEEEEeCCe-EEEEEC--CcEEEEEECCCCcE
Q 047931 245 GDCLCLQFFK-------GKMKEHWIMKEYGVKESWTRVFIHQDPNNVWPLCLWKNST-KLLVIN--RKNLLVCDCNNEGS 314 (339)
Q Consensus 245 ~G~L~~v~~~-------~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~-i~~~~~--~~~~~~yd~~t~~~ 314 (339)
+++||+.... ...=.||+++- .++..+.+|+..-.-.-+++..+|+ .++..+ +..+.++|.+|.+.
T Consensus 330 g~rlyVa~~~~~~gthk~~s~~VsVID~----~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kv 405 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKAASRFVVVLNA----ETGERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEE 405 (426)
T ss_dssp GTEEEEEEEECCTTCTTSCEEEEEEEET----TTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCE
T ss_pred CCEEEEEecccccccccCCCCEEEEEEC----CCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCE
Confidence 5678877651 12456888874 4577777775421133455667787 666544 56799999999985
Q ss_pred E
Q 047931 315 E 315 (339)
Q Consensus 315 ~ 315 (339)
.
T Consensus 406 v 406 (426)
T 3c75_H 406 L 406 (426)
T ss_dssp E
T ss_pred E
Confidence 5
No 140
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=69.43 E-value=81 Score=30.15 Aligned_cols=176 Identities=6% Similarity=0.004 Sum_probs=89.3
Q ss_pred CCCEEEEEccccccee-ecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEEe-cccCCc
Q 047931 110 KPKIFFVLNPLTRESK-RIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRV-LASGYT 186 (339)
Q Consensus 110 ~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~-~~~~~~ 186 (339)
.++.+.|+|..+++.. .+...... ..++.+ .++.+-+..- ....+.+|+..++..... ......
T Consensus 33 ~~g~v~iwd~~~~~~~~~~~~~~~~--------v~~~~~s~~~~~l~~~~-----~dg~i~vw~~~~~~~~~~~~~~~~~ 99 (814)
T 3mkq_A 33 YSGRVEIWNYETQVEVRSIQVTETP--------VRAGKFIARKNWIIVGS-----DDFRIRVFNYNTGEKVVDFEAHPDY 99 (814)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSC--------EEEEEEEGGGTEEEEEE-----TTSEEEEEETTTCCEEEEEECCSSC
T ss_pred CCCEEEEEECCCCceEEEEecCCCc--------EEEEEEeCCCCEEEEEe-----CCCeEEEEECCCCcEEEEEecCCCC
Confidence 4567888888776543 23222211 445555 3344433322 255788998887765332 111111
Q ss_pred cCccCCCceE--ECCeEEEEEecCCCCeEEEEEECCCc-eeee-ecCCCCCCCCceeEEEEE--CCeEEEEEeCCCeEEE
Q 047931 187 RPLINVPGTL--TNGALHWRLQKHGGDFVLAAFDLVEE-RFKE-FPLPDASTSFRFFGTGVL--GDCLCLQFFKGKMKEH 260 (339)
Q Consensus 187 ~~~~~~~~v~--~~G~lyw~~~~~~~~~~il~fD~~~~-~~~~-i~lP~~~~~~~~~~l~~~--~G~L~~v~~~~~~l~i 260 (339)
. ..+. -+|..-..+..+ ..|..+|+.++ .... +..... ....+.-. +|.+.++...+..+.+
T Consensus 100 v-----~~~~~s~~~~~l~~~~~d---g~i~vw~~~~~~~~~~~~~~~~~----~v~~~~~~p~~~~~l~~~~~dg~v~v 167 (814)
T 3mkq_A 100 I-----RSIAVHPTKPYVLSGSDD---LTVKLWNWENNWALEQTFEGHEH----FVMCVAFNPKDPSTFASGCLDRTVKV 167 (814)
T ss_dssp E-----EEEEECSSSSEEEEEETT---SEEEEEEGGGTSEEEEEEECCSS----CEEEEEEETTEEEEEEEEETTSEEEE
T ss_pred E-----EEEEEeCCCCEEEEEcCC---CEEEEEECCCCceEEEEEcCCCC----cEEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 0 1111 134332233332 47888898775 3222 221111 12233333 4666666668889999
Q ss_pred EEEcccCCCCCeEEEEEecCCCCeeEEEEEe--CCeEEEEE-CCcEEEEEECCCCcE
Q 047931 261 WIMKEYGVKESWTRVFIHQDPNNVWPLCLWK--NSTKLLVI-NRKNLLVCDCNNEGS 314 (339)
Q Consensus 261 W~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~--~~~i~~~~-~~~~~~~yd~~t~~~ 314 (339)
|.++... ...... ....-+...+++.+ ++..++.. .++.+..||.++++.
T Consensus 168 wd~~~~~--~~~~~~--~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~ 220 (814)
T 3mkq_A 168 WSLGQST--PNFTLT--TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSC 220 (814)
T ss_dssp EETTCSS--CSEEEE--CCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEE
T ss_pred EECCCCc--ceeEEe--cCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcE
Confidence 9987522 222211 11112245566665 66555544 455799999988774
No 141
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=69.35 E-value=49 Score=27.58 Aligned_cols=170 Identities=10% Similarity=-0.007 Sum_probs=81.2
Q ss_pred CceEEEcc--CCCEEEEEcccccceee-cCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCce
Q 047931 102 NGLVCTTP--KPKIFFVLNPLTRESKR-IPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSW 177 (339)
Q Consensus 102 ~GLl~~~~--~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W 177 (339)
++.+.+.. ....++++|+.|++... ++..... ..++.+ ..+.+-++ .. ....+.+|+..++.=
T Consensus 152 g~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~--------~~~~~~s~dg~~l~~-~~----~~~~i~~~d~~~~~~ 218 (353)
T 3vgz_A 152 TNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKM--------STGLALDSEGKRLYT-TN----ADGELITIDTADNKI 218 (353)
T ss_dssp TTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTT--------CCCCEEETTTTEEEE-EC----TTSEEEEEETTTTEE
T ss_pred CCEEEEEecCCCceEEEEcCCCCceEEEecCCCCc--------cceEEECCCCCEEEE-Ec----CCCeEEEEECCCCeE
Confidence 34444433 35679999998887543 3312211 122333 23333222 21 134667788776532
Q ss_pred EEecccCCccCccCCC--ceEECCeEEEEEecCCCCeEEEEEECCCcee-eeecCCCCCCCCceeEEEEE-CCe-EEEEE
Q 047931 178 RRVLASGYTRPLINVP--GTLTNGALHWRLQKHGGDFVLAAFDLVEERF-KEFPLPDASTSFRFFGTGVL-GDC-LCLQF 252 (339)
Q Consensus 178 ~~~~~~~~~~~~~~~~--~v~~~G~lyw~~~~~~~~~~il~fD~~~~~~-~~i~lP~~~~~~~~~~l~~~-~G~-L~~v~ 252 (339)
...-..+......... .+.-+|...|+.... ...|..+|+.+.+. ..++.+... .+... +|+ |++..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--~~~v~~~d~~~~~~~~~~~~~~~~------~~~~s~dg~~l~v~~ 290 (353)
T 3vgz_A 219 LSRKKLLDDGKEHFFINISLDTARQRAFITDSK--AAEVLVVDTRNGNILAKVAAPESL------AVLFNPARNEAYVTH 290 (353)
T ss_dssp EEEEECCCSSSCCCEEEEEEETTTTEEEEEESS--SSEEEEEETTTCCEEEEEECSSCC------CEEEETTTTEEEEEE
T ss_pred EEEEEcCCCCCCcccceEEECCCCCEEEEEeCC--CCEEEEEECCCCcEEEEEEcCCCc------eEEECCCCCEEEEEE
Confidence 2111111000000011 123346533444332 25899999987664 445554431 12333 555 66655
Q ss_pred eCCCeEEEEEEcccCCCCCeEEEEEecCCCCeeEEEEEeCCeEEEE
Q 047931 253 FKGKMKEHWIMKEYGVKESWTRVFIHQDPNNVWPLCLWKNSTKLLV 298 (339)
Q Consensus 253 ~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~i~~~ 298 (339)
.....+.+|.++. ...+..+...-...-+++.++|+.++.
T Consensus 291 ~~~~~v~~~d~~~------~~~~~~~~~~~~~~~~~~s~dg~~l~v 330 (353)
T 3vgz_A 291 RQAGKVSVIDAKS------YKVVKTFDTPTHPNSLALSADGKTLYV 330 (353)
T ss_dssp TTTTEEEEEETTT------TEEEEEEECCSEEEEEEECTTSCEEEE
T ss_pred CCCCeEEEEECCC------CeEEEEEecCCCCCeEEEcCCCCEEEE
Confidence 5778888887654 233334443222344566677764443
No 142
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=69.28 E-value=49 Score=27.55 Aligned_cols=108 Identities=8% Similarity=-0.011 Sum_probs=62.0
Q ss_pred ECCeEEEEEecCCCCeEEEEEECCCceeeee-cCCCCCCCCceeEEEEE----CCeEEEEEeCCCeEEEEEEcccCCCCC
Q 047931 197 TNGALHWRLQKHGGDFVLAAFDLVEERFKEF-PLPDASTSFRFFGTGVL----GDCLCLQFFKGKMKEHWIMKEYGVKES 271 (339)
Q Consensus 197 ~~G~lyw~~~~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~l~~~----~G~L~~v~~~~~~l~iW~l~~~~~~~~ 271 (339)
-+|.+...+... ..|..+|+.+.+.... ..+. ....+... +|...++...+..+.+|.++.......
T Consensus 178 ~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 249 (357)
T 3i2n_A 178 QEERVVCAGYDN---GDIKLFDLRNMALRWETNIKN-----GVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKG 249 (357)
T ss_dssp -CCCEEEEEETT---SEEEEEETTTTEEEEEEECSS-----CEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTE
T ss_pred CCCCEEEEEccC---CeEEEEECccCceeeecCCCC-----ceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccc
Confidence 355555555443 4899999998775433 1111 12233333 577777777888999999986322122
Q ss_pred eEEEEEecC-CCCeeEEEEEeCCe-EEEEE-CCcEEEEEECCCCc
Q 047931 272 WTRVFIHQD-PNNVWPLCLWKNST-KLLVI-NRKNLLVCDCNNEG 313 (339)
Q Consensus 272 W~~~~~i~~-~~~~~~~~~~~~~~-i~~~~-~~~~~~~yd~~t~~ 313 (339)
.... .+.. .-.+.-+++.+++. +++.. .++.+..||+++..
T Consensus 250 ~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 293 (357)
T 3i2n_A 250 FASV-SEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPI 293 (357)
T ss_dssp EEEE-EEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCS
T ss_pred eeee-ccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCc
Confidence 2211 2212 22256677777776 55544 45679999987643
No 143
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=68.60 E-value=49 Score=27.58 Aligned_cols=68 Identities=13% Similarity=0.134 Sum_probs=45.3
Q ss_pred CeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecC-CCCeeEEEEEeCCeEEEE-ECCcEEEEEECCCCcEEEe
Q 047931 246 DCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQD-PNNVWPLCLWKNSTKLLV-INRKNLLVCDCNNEGSEDV 317 (339)
Q Consensus 246 G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~-~~~~~~~~~~~~~~i~~~-~~~~~~~~yd~~t~~~~~v 317 (339)
|.+.+....+..+.||.++..+ ......+.. .-.+.-+++.++++.++. ..++.+..||+++++....
T Consensus 54 g~~l~~~~~dg~i~iw~~~~~~----~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 123 (368)
T 3mmy_A 54 GNFLIAGSWANDVRCWEVQDSG----QTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQI 123 (368)
T ss_dssp SEEEEEEETTSEEEEEEECTTS----CEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred ceEEEEECCCCcEEEEEcCCCC----ceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceee
Confidence 5777777788899999998522 233233322 222566777777765554 4466799999999986654
No 144
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=68.46 E-value=46 Score=26.96 Aligned_cols=198 Identities=9% Similarity=-0.007 Sum_probs=101.4
Q ss_pred eCceEEEcc-CCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceE
Q 047931 101 CNGLVCTTP-KPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWR 178 (339)
Q Consensus 101 ~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~ 178 (339)
.+|-+.+.. ....+.++||-.+....++..... ........++.+ ..+..-.+.- ......+.+|+.....-+
T Consensus 39 ~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~--~~~~~~p~~i~~~~~~g~l~v~~---~~~~~~i~~~d~~g~~~~ 113 (286)
T 1q7f_A 39 AQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKR--DSQLLYPNRVAVVRNSGDIIVTE---RSPTHQIQIYNQYGQFVR 113 (286)
T ss_dssp TTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSS--TTCBSSEEEEEEETTTTEEEEEE---CGGGCEEEEECTTSCEEE
T ss_pred CCCCEEEEECCCCEEEEECCCCcEEEEecccCCC--cccccCceEEEEEcCCCeEEEEc---CCCCCEEEEECCCCcEEE
Confidence 355554442 356788899876655555432211 000011344444 2333322221 111346777774333223
Q ss_pred EecccCCccCccCCCceEE--CCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCeEEEEEeCC
Q 047931 179 RVLASGYTRPLINVPGTLT--NGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDCLCLQFFKG 255 (339)
Q Consensus 179 ~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~L~~v~~~~ 255 (339)
.+...... ...++.+ +|.+|...... ..|..+|...+....+..+.... ....++.. +|.|++.....
T Consensus 114 ~~~~~~~~----~~~~i~~~~~g~l~v~~~~~---~~i~~~~~~g~~~~~~~~~~~~~--~p~~i~~~~~g~l~v~~~~~ 184 (286)
T 1q7f_A 114 KFGATILQ----HPRGVTVDNKGRIIVVECKV---MRVIIFDQNGNVLHKFGCSKHLE--FPNGVVVNDKQEIFISDNRA 184 (286)
T ss_dssp EECTTTCS----CEEEEEECTTSCEEEEETTT---TEEEEECTTSCEEEEEECTTTCS--SEEEEEECSSSEEEEEEGGG
T ss_pred EecCccCC----CceEEEEeCCCCEEEEECCC---CEEEEEcCCCCEEEEeCCCCccC--CcEEEEECCCCCEEEEECCC
Confidence 33211110 1122333 57766554332 47899998777666664432221 22344444 78888877777
Q ss_pred CeEEEEEEcccCCCCCeEEEEEecC--CC-CeeEEEEEeCCeEEEEECC-c-EEEEEECCCCcEEEeEE
Q 047931 256 KMKEHWIMKEYGVKESWTRVFIHQD--PN-NVWPLCLWKNSTKLLVINR-K-NLLVCDCNNEGSEDVAV 319 (339)
Q Consensus 256 ~~l~iW~l~~~~~~~~W~~~~~i~~--~~-~~~~~~~~~~~~i~~~~~~-~-~~~~yd~~t~~~~~v~~ 319 (339)
..+.+|..+ ... +.++.. .+ ...-+++..+|.+++.... . .+..||.+++.++.+..
T Consensus 185 ~~i~~~~~~-----g~~--~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~ 246 (286)
T 1q7f_A 185 HCVKVFNYE-----GQY--LRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALES 246 (286)
T ss_dssp TEEEEEETT-----CCE--EEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEE
T ss_pred CEEEEEcCC-----CCE--EEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcc
Confidence 788887643 122 223322 12 1334556667788776643 3 79999988777776654
No 145
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=68.21 E-value=51 Score=27.86 Aligned_cols=62 Identities=11% Similarity=0.030 Sum_probs=34.5
Q ss_pred CCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEE--ECCeEEEEEeCCCeEEEEEEc
Q 047931 198 NGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGV--LGDCLCLQFFKGKMKEHWIMK 264 (339)
Q Consensus 198 ~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~--~~G~L~~v~~~~~~l~iW~l~ 264 (339)
+|.+||..... ..|..+++.+.......+..... ....++. .+|.||+.......+.+..++
T Consensus 46 ~~~lyw~D~~~---~~I~r~~~~g~~~~~~~~~~~l~--~p~glavd~~~g~ly~~d~~~~~I~~~~~d 109 (318)
T 3sov_A 46 HGLIYWSDVSE---EAIKRTEFNKTESVQNVVVSGLL--SPDGLACDWLGEKLYWTDSETNRIEVSNLD 109 (318)
T ss_dssp GTEEEEEETTT---TEEEEEETTSSSCCCEEEEECCS--CCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCEEEEEECCC---CcEEEEEccCCCceEEEEcCCCC--CccEEEEEcCCCeEEEEECCCCEEEEEECC
Confidence 48999987654 47888988765321111111111 1112333 378888877766666655544
No 146
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=67.97 E-value=50 Score=27.24 Aligned_cols=95 Identities=14% Similarity=0.151 Sum_probs=59.9
Q ss_pred eEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecCCCCeeEEEEE
Q 047931 212 FVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQDPNNVWPLCLW 290 (339)
Q Consensus 212 ~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~ 290 (339)
..|..+|+.+.+.......... .-..+... +|++.+....+..+.+|.++. +..+..+...-.+..+++.
T Consensus 195 ~~i~i~d~~~~~~~~~~~~h~~---~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~------~~~~~~~~~~~~v~~~~~~ 265 (340)
T 4aow_A 195 KLVKVWNLANCKLKTNHIGHTG---YLNTVTVSPDGSLCASGGKDGQAMLWDLNE------GKHLYTLDGGDIINALCFS 265 (340)
T ss_dssp SCEEEEETTTTEEEEEECCCSS---CEEEEEECTTSSEEEEEETTCEEEEEETTT------TEEEEEEECSSCEEEEEEC
T ss_pred CEEEEEECCCCceeeEecCCCC---cEEEEEECCCCCEEEEEeCCCeEEEEEecc------CceeeeecCCceEEeeecC
Confidence 4677889888765443211111 12233333 788877777888999998774 3344444432225566677
Q ss_pred eCCeEEEEECCcEEEEEECCCCcEE
Q 047931 291 KNSTKLLVINRKNLLVCDCNNEGSE 315 (339)
Q Consensus 291 ~~~~i~~~~~~~~~~~yd~~t~~~~ 315 (339)
+++.++....+..+..||++++...
T Consensus 266 ~~~~~~~~~~d~~i~iwd~~~~~~~ 290 (340)
T 4aow_A 266 PNRYWLCAATGPSIKIWDLEGKIIV 290 (340)
T ss_dssp SSSSEEEEEETTEEEEEETTTTEEE
T ss_pred CCCceeeccCCCEEEEEECCCCeEE
Confidence 7777777777778999999887643
No 147
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=67.85 E-value=73 Score=29.03 Aligned_cols=66 Identities=3% Similarity=-0.111 Sum_probs=43.7
Q ss_pred CCe-EEEEEeCCCeEEEEEEcccCCCCCeEEEEEecC-CC---CeeEEEEEeC-CeEEEE-ECCcEEEEEECCCCcEEE
Q 047931 245 GDC-LCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQD-PN---NVWPLCLWKN-STKLLV-INRKNLLVCDCNNEGSED 316 (339)
Q Consensus 245 ~G~-L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~-~~---~~~~~~~~~~-~~i~~~-~~~~~~~~yd~~t~~~~~ 316 (339)
+|. +.+....+..+.+|.++. .....++.. .- .+.-+++.++ ++.++. ..++.+..||+++++...
T Consensus 171 ~~~~~l~~~~~d~~v~vwd~~~------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 243 (615)
T 1pgu_A 171 SRPMRSMTVGDDGSVVFYQGPP------FKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLK 243 (615)
T ss_dssp SSSCEEEEEETTTEEEEEETTT------BEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEE
T ss_pred CCCcEEEEEeCCCcEEEEeCCC------cceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeE
Confidence 555 555555888999998654 444555543 22 2566777777 776664 445679999998887543
No 148
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=67.46 E-value=53 Score=31.45 Aligned_cols=140 Identities=7% Similarity=-0.032 Sum_probs=66.1
Q ss_pred CcEEEEEEeCCCceEEecccCCccCccCCCceEE---CCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeE
Q 047931 164 NMSVAIFSLRMNSWRRVLASGYTRPLINVPGTLT---NGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFG 240 (339)
Q Consensus 164 ~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~ 240 (339)
...+.+++.....-+.+..... ....++.+ +|.|||..... ...|..+|+.......+.. .... ..-.
T Consensus 474 ~~~I~v~d~dg~~~~~l~~~~~----~~P~giavDp~~g~ly~td~~~--~~~I~~~~~dG~~~~~l~~-~~l~--~PnG 544 (699)
T 1n7d_A 474 LGTVSVADTKGVKRKTLFREQG----SKPRAIVVDPVHGFMYWTDWGT--PAKIKKGGLNGVDIYSLVT-ENIQ--WPNG 544 (699)
T ss_dssp TSCEEEEBSSSCCEEEECCCSS----CCCCCEECCSSSSCCEECCCSS--SCCEEBCCSSSCCCCEESC-SSCS--SCCC
T ss_pred CCeEEEEecCCCceEEEEeCCC----CCcceEEEccCCCcEEEcccCC--CCeEEEEeCCCCCeeEEEe-CCCC--CccE
Confidence 3456677665544333321111 11234444 68999975431 1367777776543333211 1111 1112
Q ss_pred EEEE--CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecCCCCeeEEEEEeC-CeEEEEEC-CcEEEEEECCCCcEEE
Q 047931 241 TGVL--GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQDPNNVWPLCLWKN-STKLLVIN-RKNLLVCDCNNEGSED 316 (339)
Q Consensus 241 l~~~--~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~-~~i~~~~~-~~~~~~yd~~t~~~~~ 316 (339)
|+.. +|+||++......|.+..++ + ... ..+......+ ..|.++.-+ +.+++... ..+|..+|..+++..+
T Consensus 545 lavd~~~~~LY~aD~~~~~I~~~d~d--G-~~~-~~~~~~~~~~-~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 545 ITLDLLSGRLYWVDSKLHSISSIDVN--G-GNR-KTILEDEKRL-AHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVN 619 (699)
T ss_dssp EEECTTTCCEEEEETTTTEEEEECSS--S-SCC-EEECCCSSSC-SSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEE
T ss_pred EEEeccCCEEEEEecCCCeEEEEccC--C-Cce-EEEEecCCcC-CCceEeEEECCEEEEEeCCCCeEEEEEccCCCceE
Confidence 4443 68899888766655544333 2 111 1111111112 234444333 34554432 3469999998776543
Q ss_pred e
Q 047931 317 V 317 (339)
Q Consensus 317 v 317 (339)
+
T Consensus 620 ~ 620 (699)
T 1n7d_A 620 L 620 (699)
T ss_dssp C
T ss_pred E
Confidence 3
No 149
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=67.34 E-value=65 Score=28.31 Aligned_cols=96 Identities=7% Similarity=-0.090 Sum_probs=54.2
Q ss_pred eEEEEEECCCceeee--ecCCCCCCCCceeEEEEE-C---CeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEec--CCCC
Q 047931 212 FVLAAFDLVEERFKE--FPLPDASTSFRFFGTGVL-G---DCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQ--DPNN 283 (339)
Q Consensus 212 ~~il~fD~~~~~~~~--i~lP~~~~~~~~~~l~~~-~---G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~--~~~~ 283 (339)
..+..+|+.+.+... +....... .....+... + |++.+....+..+.||.++.. .- ..++. ..-.
T Consensus 171 g~v~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~----~~--~~~~~~~h~~~ 243 (450)
T 2vdu_B 171 GDVYSIDINSIPEEKFTQEPILGHV-SMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQC----FI--VDKWLFGHKHF 243 (450)
T ss_dssp SEEEEEETTSCCCSSCCCCCSEECS-SCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCT----TC--EEEECCCCSSC
T ss_pred CcEEEEecCCcccccccceeeeccc-CceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCC----ce--eeeeecCCCCc
Confidence 467888877655432 11100111 112233333 5 777777778889999999752 11 12211 2222
Q ss_pred eeEEEEEeCCeEEEE-ECCcEEEEEECCCCcEE
Q 047931 284 VWPLCLWKNSTKLLV-INRKNLLVCDCNNEGSE 315 (339)
Q Consensus 284 ~~~~~~~~~~~i~~~-~~~~~~~~yd~~t~~~~ 315 (339)
+.-+++. ++..++. ..+..+.+||+++++..
T Consensus 244 v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 244 VSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNL 275 (450)
T ss_dssp EEEEEEC-STTEEEEEESSSEEEEEETTTCCEE
T ss_pred eEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEe
Confidence 5566777 7765554 45667999999998843
No 150
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=67.16 E-value=47 Score=31.59 Aligned_cols=115 Identities=10% Similarity=0.039 Sum_probs=61.1
Q ss_pred CCceEECCeEEEEEecCCCCeEEEEEECCCce--eeeecCCCCC-------CCCceeEEEEECCeEEEEEeCCCeEEEEE
Q 047931 192 VPGTLTNGALHWRLQKHGGDFVLAAFDLVEER--FKEFPLPDAS-------TSFRFFGTGVLGDCLCLQFFKGKMKEHWI 262 (339)
Q Consensus 192 ~~~v~~~G~lyw~~~~~~~~~~il~fD~~~~~--~~~i~lP~~~-------~~~~~~~l~~~~G~L~~v~~~~~~l~iW~ 262 (339)
..++..+|.+|.....+ .|.++|.++.+ |+. ..+... .......++..+|+|++... +..+ ..
T Consensus 71 ~~P~v~~g~vyv~~~~~----~v~AlD~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~-dg~l--~a 142 (677)
T 1kb0_A 71 ATPVVVDGIMYVSASWS----VVHAIDTRTGNRIWTY-DPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW-DGRL--IA 142 (677)
T ss_dssp CCCEEETTEEEEECGGG----CEEEEETTTTEEEEEE-CCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT-TSEE--EE
T ss_pred eCCEEECCEEEEECCCC----eEEEEECCCCcEEEEE-cCCCCccccccccccCCCCCceEECCEEEEEcC-CCEE--EE
Confidence 45688999999887655 79999988754 543 322211 00011234455777665433 2333 33
Q ss_pred EcccCCCCCeEEEEEecC----CCCeeEEEEEeCCeEEEEEC------CcEEEEEECCCCcEEE
Q 047931 263 MKEYGVKESWTRVFIHQD----PNNVWPLCLWKNSTKLLVIN------RKNLLVCDCNNEGSED 316 (339)
Q Consensus 263 l~~~~~~~~W~~~~~i~~----~~~~~~~~~~~~~~i~~~~~------~~~~~~yd~~t~~~~~ 316 (339)
++-...+..|........ .....|+.. ++.+++... +..++.||.+|++...
T Consensus 143 lD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~--~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W 204 (677)
T 1kb0_A 143 LDAATGKEVWHQNTFEGQKGSLTITGAPRVF--KGKVIIGNGGAEYGVRGYITAYDAETGERKW 204 (677)
T ss_dssp EETTTCCEEEEEETTTTCCSSCBCCSCCEEE--TTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred EECCCCCEEeeecCCcCcCcCcccccCcEEE--CCEEEEEecccccCCCCEEEEEECCCCcEEE
Confidence 332112345664311010 111234332 455655443 3569999999998653
No 151
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=67.05 E-value=52 Score=27.06 Aligned_cols=98 Identities=12% Similarity=0.054 Sum_probs=53.5
Q ss_pred eEEEEEECCCcee-eeecCCCCCCCCceeEEEEE-CCe-EEEEEeCCCeEEEEEEcccCCCCCeEEEEEecCCC----Ce
Q 047931 212 FVLAAFDLVEERF-KEFPLPDASTSFRFFGTGVL-GDC-LCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQDPN----NV 284 (339)
Q Consensus 212 ~~il~fD~~~~~~-~~i~lP~~~~~~~~~~l~~~-~G~-L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~----~~ 284 (339)
..|..+|+.+.+. ..+.++..... ...+... +|+ |++.......+.+|.++. .+-.....+...- ..
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~----~~~~~~~~~~~~~~~~~~~ 84 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIADAGPT--PMVPMVAPGGRIAYATVNKSESLVKIDLVT----GETLGRIDLSTPEERVKSL 84 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTTCTTC--CCCEEECTTSSEEEEEETTTTEEEEEETTT----CCEEEEEECCBTTEEEECT
T ss_pred CeEEEEECCCCcEEEEEEcCCCCCC--ccceEEcCCCCEEEEEeCCCCeEEEEECCC----CCeEeeEEcCCcccccccc
Confidence 4788899988654 34555542100 1123333 664 555444677888887654 2222222221100 13
Q ss_pred eEEEEEeCCeEEEEE-------------CCcEEEEEECCCCcEE
Q 047931 285 WPLCLWKNSTKLLVI-------------NRKNLLVCDCNNEGSE 315 (339)
Q Consensus 285 ~~~~~~~~~~i~~~~-------------~~~~~~~yd~~t~~~~ 315 (339)
.-+++.++|+.++.. .+..+..||+++++..
T Consensus 85 ~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~ 128 (337)
T 1pby_B 85 FGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR 128 (337)
T ss_dssp TCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE
T ss_pred cceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEE
Confidence 346677777655544 3467999999988754
No 152
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=66.58 E-value=53 Score=31.31 Aligned_cols=115 Identities=10% Similarity=0.014 Sum_probs=61.9
Q ss_pred CCceEECCeEEEEEecCCCCeEEEEEECCCc--eeeeecCCCCCC-------CCceeEEEEECCeEEEEEeCCCeEEEEE
Q 047931 192 VPGTLTNGALHWRLQKHGGDFVLAAFDLVEE--RFKEFPLPDAST-------SFRFFGTGVLGDCLCLQFFKGKMKEHWI 262 (339)
Q Consensus 192 ~~~v~~~G~lyw~~~~~~~~~~il~fD~~~~--~~~~i~lP~~~~-------~~~~~~l~~~~G~L~~v~~~~~~l~iW~ 262 (339)
..++..+|.+|.....+ .|.++|.+|. .|+. ..+.... ......++..+|+|++... ...+ ..
T Consensus 64 ~~P~v~~g~vyv~~~~~----~v~AlD~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-dg~l--~A 135 (689)
T 1yiq_A 64 ATPIVVDGVMYTTGPFS----VVYALDARDGRLIWKY-DPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-DGRL--EA 135 (689)
T ss_dssp CCCEEETTEEEEECGGG----CEEEEETTTCCEEEEE-CCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-TSEE--EE
T ss_pred ecCEEECCEEEEEcCCC----eEEEEECCCCceeEEE-cCCCCccccccccccCCCCccEEECCEEEEEcc-CCEE--EE
Confidence 45688999999987665 7999998764 4554 2222110 0011223455777665443 3333 33
Q ss_pred EcccCCCCCeEEEEEecCC----CCeeEEEEEeCCeEEEEEC------CcEEEEEECCCCcEEE
Q 047931 263 MKEYGVKESWTRVFIHQDP----NNVWPLCLWKNSTKLLVIN------RKNLLVCDCNNEGSED 316 (339)
Q Consensus 263 l~~~~~~~~W~~~~~i~~~----~~~~~~~~~~~~~i~~~~~------~~~~~~yd~~t~~~~~ 316 (339)
++-...+..|......... +...|+.. +|.+++... +..++.||.+|++...
T Consensus 136 lDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~--~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 197 (689)
T 1yiq_A 136 IDAKTGQRAWSVDTRADHKRSYTITGAPRVV--NGKVVIGNGGAEFGVRGYVTAYDAETGKEAW 197 (689)
T ss_dssp EETTTCCEEEEEECCSCTTSCCBCCSCCEEE--TTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred EECCCCCEeeeecCcCCCCCCccccCCcEEE--CCEEEEEeCCCccCCCCEEEEEECCCCcEEE
Confidence 3321123567654321111 11334432 556665432 3469999999999553
No 153
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=66.46 E-value=84 Score=29.24 Aligned_cols=119 Identities=14% Similarity=0.122 Sum_probs=62.3
Q ss_pred CCceEECCeEEEEEecCCCCeEEEEEECCCc--eeeee-cCCCCCC---CCceeEEEEECCeEEEEEeCCCeEEEEEEcc
Q 047931 192 VPGTLTNGALHWRLQKHGGDFVLAAFDLVEE--RFKEF-PLPDAST---SFRFFGTGVLGDCLCLQFFKGKMKEHWIMKE 265 (339)
Q Consensus 192 ~~~v~~~G~lyw~~~~~~~~~~il~fD~~~~--~~~~i-~lP~~~~---~~~~~~l~~~~G~L~~v~~~~~~l~iW~l~~ 265 (339)
..++..+|.+|...... .+.++|.++. .|+.- ..|.... ......++..+|++++...+. . |..++-
T Consensus 62 ~~P~v~~g~vyv~~~~~----~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~dg-~--l~AlD~ 134 (582)
T 1flg_A 62 SQAIVSDGVIYVTASYS----RLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDA-S--VVALNK 134 (582)
T ss_dssp CCCEEETTEEEEEETTT----EEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETTT-E--EEEEES
T ss_pred eccEEECCEEEEEcCCC----CEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCCC-E--EEEEEC
Confidence 45688999999877654 5999998764 46543 2222110 000122345677776654322 2 334442
Q ss_pred cCCCCCeEEEEEecC---CCCeeEEEEEe--CCe-EEEEEC-------CcEEEEEECCCCcEEEe
Q 047931 266 YGVKESWTRVFIHQD---PNNVWPLCLWK--NST-KLLVIN-------RKNLLVCDCNNEGSEDV 317 (339)
Q Consensus 266 ~~~~~~W~~~~~i~~---~~~~~~~~~~~--~~~-i~~~~~-------~~~~~~yd~~t~~~~~v 317 (339)
...+..|.....-.. .+...|+.... +|+ .++... +..++.||.+|++....
T Consensus 135 ~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~ 199 (582)
T 1flg_A 135 NTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWM 199 (582)
T ss_dssp SSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEE
T ss_pred CCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEee
Confidence 222346764321110 12234554432 232 444332 34699999999996653
No 154
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=65.34 E-value=57 Score=26.90 Aligned_cols=102 Identities=7% Similarity=-0.064 Sum_probs=57.9
Q ss_pred eEEEEEECCC-ceee-----eecCCCCCCCCceeEEEEE-CCe-EEEEEeCCCeEEEEEEcccCCCCCeEEEEEecC---
Q 047931 212 FVLAAFDLVE-ERFK-----EFPLPDASTSFRFFGTGVL-GDC-LCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQD--- 280 (339)
Q Consensus 212 ~~il~fD~~~-~~~~-----~i~lP~~~~~~~~~~l~~~-~G~-L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~--- 280 (339)
..|..+|+.+ .+.. .+..+... ....+... +|+ |++.......+.+|.++.. ..++.....+..
T Consensus 151 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~--~g~~~~~~~~~~~~~ 225 (343)
T 1ri6_A 151 DRICLFTVSDDGHLVAQDPAEVTTVEGA---GPRHMVFHPNEQYAYCVNELNSSVDVWELKDP--HGNIECVQTLDMMPE 225 (343)
T ss_dssp TEEEEEEECTTSCEEEEEEEEEECSTTC---CEEEEEECTTSSEEEEEETTTTEEEEEESSCT--TSCCEEEEEEECSCT
T ss_pred CEEEEEEecCCCceeeecccccccCCCC---CcceEEECCCCCEEEEEeCCCCEEEEEEecCC--CCcEEEEeeccccCc
Confidence 3788899887 5554 23333222 12223333 666 5555447889999999742 234544444331
Q ss_pred CC----CeeEEEEEeCCeEEE-EE-CCcEEEEEECC--CCcEEEeE
Q 047931 281 PN----NVWPLCLWKNSTKLL-VI-NRKNLLVCDCN--NEGSEDVA 318 (339)
Q Consensus 281 ~~----~~~~~~~~~~~~i~~-~~-~~~~~~~yd~~--t~~~~~v~ 318 (339)
.. ...-+++.++|+.++ .. .+..+.+||++ +++.+.+.
T Consensus 226 ~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~ 271 (343)
T 1ri6_A 226 NFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEG 271 (343)
T ss_dssp TCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEE
T ss_pred cccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEee
Confidence 11 133467777886555 44 34579999988 66666653
No 155
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=65.14 E-value=67 Score=27.66 Aligned_cols=105 Identities=6% Similarity=0.027 Sum_probs=59.8
Q ss_pred CCeEEEEEecCCCCeEEEEEECCCceeeee-cCCCCCCCCceeEEEEE-CCeEEEEEeCCCeEEEEEEcccCCCCCeEEE
Q 047931 198 NGALHWRLQKHGGDFVLAAFDLVEERFKEF-PLPDASTSFRFFGTGVL-GDCLCLQFFKGKMKEHWIMKEYGVKESWTRV 275 (339)
Q Consensus 198 ~G~lyw~~~~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~l~~~-~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~ 275 (339)
+|.....+..+ ..|..+|+++.+.... ..... ....+... +|...+....+..+.+|.++. .+- .
T Consensus 134 dg~~l~s~~~d---~~i~iwd~~~~~~~~~~~~h~~----~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~----~~~--~ 200 (393)
T 1erj_A 134 DGKFLATGAED---RLIRIWDIENRKIVMILQGHEQ----DIYSLDYFPSGDKLVSGSGDRTVRIWDLRT----GQC--S 200 (393)
T ss_dssp TSSEEEEEETT---SCEEEEETTTTEEEEEECCCSS----CEEEEEECTTSSEEEEEETTSEEEEEETTT----TEE--E
T ss_pred CCCEEEEEcCC---CeEEEEECCCCcEEEEEccCCC----CEEEEEEcCCCCEEEEecCCCcEEEEECCC----Cee--E
Confidence 45444333332 4788889888765432 21111 12233333 677666666888999998874 212 2
Q ss_pred EEecCCCCeeEEEEEe-CCeEEEEE-CCcEEEEEECCCCcEE
Q 047931 276 FIHQDPNNVWPLCLWK-NSTKLLVI-NRKNLLVCDCNNEGSE 315 (339)
Q Consensus 276 ~~i~~~~~~~~~~~~~-~~~i~~~~-~~~~~~~yd~~t~~~~ 315 (339)
.++...-+...+++.+ +|.+++.. .++.+..||.++++..
T Consensus 201 ~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~ 242 (393)
T 1erj_A 201 LTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLV 242 (393)
T ss_dssp EEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEE
T ss_pred EEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEE
Confidence 2333322355666666 66655544 4556999999887643
No 156
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=64.97 E-value=1e+02 Score=29.70 Aligned_cols=200 Identities=9% Similarity=-0.038 Sum_probs=99.0
Q ss_pred eCceEEEccCCCEEEEEcccccceeecCCCCCCCC-CCCCCCeeEEeeeCCceEEEEEeeEeCCCcEEEEEEeCCCceEE
Q 047931 101 CNGLVCTTPKPKIFFVLNPLTRESKRIPDVPFEPF-PRSSDDLYGFGCTAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRR 179 (339)
Q Consensus 101 ~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~-~~~~~~~~~~g~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~ 179 (339)
.+|-+-+......+..+||.++++...+..+.... ........++....+.- ++.+. . ....+..|+..++.++.
T Consensus 366 ~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-~lWig-t--~~~Gl~~~d~~~~~~~~ 441 (795)
T 4a2l_A 366 KDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKS-LVYIG-T--HAGGLSILHRNSGQVEN 441 (795)
T ss_dssp TTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTT-EEEEE-E--TTTEEEEEETTTCCEEE
T ss_pred CCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCC-EEEEE-e--CcCceeEEeCCCCcEEE
Confidence 34555444334567888888887766653321100 00001122222211111 11121 1 12457788888887776
Q ss_pred ecccCCccCccCCCceEE--CCeEEEEEecCCCCeEEEEEECCCceeeeecCC---CCCCCCceeEEEEE-CCeEEEEEe
Q 047931 180 VLASGYTRPLINVPGTLT--NGALHWRLQKHGGDFVLAAFDLVEERFKEFPLP---DASTSFRFFGTGVL-GDCLCLQFF 253 (339)
Q Consensus 180 ~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP---~~~~~~~~~~l~~~-~G~L~~v~~ 253 (339)
..............++.. +|.+ |++... .+..||.+++++..+... ..........+.+. +|.|++.+.
T Consensus 442 ~~~~~~~l~~~~v~~i~~d~~g~l-wigt~~----Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~ 516 (795)
T 4a2l_A 442 FNQRNSQLVNENVYAILPDGEGNL-WLGTLS----ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE 516 (795)
T ss_dssp ECTTTSCCSCSCEEEEEECSSSCE-EEEESS----CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES
T ss_pred eecCCCCcCCCeeEEEEECCCCCE-EEEecC----ceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC
Confidence 642111110001112222 3554 555544 689999999999877432 12211122334443 788887665
Q ss_pred CCCeEEEEEEcccCCCCCeEEEEEec-C--CC---CeeEEEEEeCCeEEEEECCcEEEEEECCCCcEEEeE
Q 047931 254 KGKMKEHWIMKEYGVKESWTRVFIHQ-D--PN---NVWPLCLWKNSTKLLVINRKNLLVCDCNNEGSEDVA 318 (339)
Q Consensus 254 ~~~~l~iW~l~~~~~~~~W~~~~~i~-~--~~---~~~~~~~~~~~~i~~~~~~~~~~~yd~~t~~~~~v~ 318 (339)
..+..|..+. .++ . +... . .+ .+.-+....+|.+.+.... .++.||+++++++.+.
T Consensus 517 --~Gl~~~~~~~----~~~-~-~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~-Gl~~~d~~~~~~~~~~ 578 (795)
T 4a2l_A 517 --EGLSVFKQEG----LDI-Q-KASILPVSNVTKLFTNCIYEASNGIIWVGTRE-GFYCFNEKDKQIKRYN 578 (795)
T ss_dssp --SCEEEEEEET----TEE-E-ECCCSCSCGGGGSCEEEEEECTTSCEEEEESS-CEEEEETTTTEEEEEC
T ss_pred --CceEEEeCCC----CeE-E-EecCCCCCCCCCCeeEEEEECCCCCEEEEeCC-CceeECCCCCcEEEeC
Confidence 3455554442 334 2 2110 1 11 1333344446677777665 7999999999888764
No 157
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=63.96 E-value=56 Score=26.35 Aligned_cols=194 Identities=9% Similarity=0.000 Sum_probs=98.6
Q ss_pred EEeeeCceEEEcc-CCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCC
Q 047931 97 IVGSCNGLVCTTP-KPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRM 174 (339)
Q Consensus 97 ~~~s~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~ 174 (339)
+.-..+|-+.+.. ....+.++||. ++...++.+... ....++.. ..+. +.... .....+..|+..
T Consensus 25 i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~------~~~~~i~~~~~g~--l~v~~---~~~~~v~~~d~~- 91 (300)
T 2qc5_A 25 ITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPD------AKVMCLIVSSLGD--IWFTE---NGANKIGKLSKK- 91 (300)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTT------CCEEEEEECTTSC--EEEEE---TTTTEEEEECTT-
T ss_pred eeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCC------CcceeEEECCCCC--EEEEe---cCCCeEEEECCC-
Confidence 3334456555444 45788999988 666554332111 01334444 2222 22111 123456777766
Q ss_pred CceEEecccCCccCccCCCceEE--CCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCeEEEE
Q 047931 175 NSWRRVLASGYTRPLINVPGTLT--NGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDCLCLQ 251 (339)
Q Consensus 175 ~~W~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~L~~v 251 (339)
+..+.... +... ....++.+ +|.+|...... ..|..+|.. .+...+.+|.... ....++.. +|+|++.
T Consensus 92 g~~~~~~~-~~~~--~~~~~i~~~~~g~l~v~~~~~---~~i~~~~~~-g~~~~~~~~~~~~--~~~~i~~d~~g~l~v~ 162 (300)
T 2qc5_A 92 GGFTEYPL-PQPD--SGPYGITEGLNGDIWFTQLNG---DRIGKLTAD-GTIYEYDLPNKGS--YPAFITLGSDNALWFT 162 (300)
T ss_dssp SCEEEEEC-SSTT--CCEEEEEECSTTCEEEEETTT---TEEEEECTT-SCEEEEECSSTTC--CEEEEEECTTSSEEEE
T ss_pred CCeEEecC-CCCC--CCCccceECCCCCEEEEccCC---CeEEEECCC-CCEEEccCCCCCC--CceeEEECCCCCEEEE
Confidence 66654421 1110 11123333 57776654422 379999998 6666666654322 22344443 7888877
Q ss_pred EeCCCeEEEEEEcccCCCCCeEEEEEecCCC-CeeEEEEEeCCeEEEEEC-CcEEEEEECCCCcEEEeEE
Q 047931 252 FFKGKMKEHWIMKEYGVKESWTRVFIHQDPN-NVWPLCLWKNSTKLLVIN-RKNLLVCDCNNEGSEDVAV 319 (339)
Q Consensus 252 ~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~-~~~~~~~~~~~~i~~~~~-~~~~~~yd~~t~~~~~v~~ 319 (339)
......+ +.++.. .+... ..++... ...-+++..+|.+++... ...+..||. ++++..+.+
T Consensus 163 ~~~~~~i--~~~~~~---g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~ 225 (300)
T 2qc5_A 163 ENQNNSI--GRITNT---GKLEE-YPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDI 225 (300)
T ss_dssp ETTTTEE--EEECTT---CCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEEC
T ss_pred ecCCCeE--EEECCC---CcEEE-eeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEEC
Confidence 6655544 444431 33432 2222222 133344555677777664 346999999 666665543
No 158
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=63.94 E-value=1.1e+02 Score=29.51 Aligned_cols=110 Identities=5% Similarity=-0.073 Sum_probs=64.9
Q ss_pred CCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEE
Q 047931 198 NGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVF 276 (339)
Q Consensus 198 ~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~ 276 (339)
+|. .|++... ..+..||..+++++.+..+ .........+.+. +|.|++... ..+ +.++.. +.+|....
T Consensus 417 ~g~-lWigt~~---~Gl~~~~~~~~~~~~~~~~-~~~~~~v~~i~~d~~g~lwigt~--~Gl--~~~~~~--~~~~~~~~ 485 (781)
T 3v9f_A 417 EGN-LWFGTYL---GNISYYNTRLKKFQIIELE-KNELLDVRVFYEDKNKKIWIGTH--AGV--FVIDLA--SKKVIHHY 485 (781)
T ss_dssp TSC-EEEEETT---EEEEEECSSSCEEEECCST-TTCCCCEEEEEECTTSEEEEEET--TEE--EEEESS--SSSCCEEE
T ss_pred CCC-EEEEecc---CCEEEEcCCCCcEEEeccC-CCCCCeEEEEEECCCCCEEEEEC--Cce--EEEeCC--CCeEEecc
Confidence 344 4666543 4899999999999887644 1111122344444 788887654 334 444421 24565543
Q ss_pred EecC-CC---CeeEEEEEeCCeEEEEECCcEEEEEECCCCcEEEeE
Q 047931 277 IHQD-PN---NVWPLCLWKNSTKLLVINRKNLLVCDCNNEGSEDVA 318 (339)
Q Consensus 277 ~i~~-~~---~~~~~~~~~~~~i~~~~~~~~~~~yd~~t~~~~~v~ 318 (339)
.... .+ .+.-+....+|.+.+......++.||.++++++.+.
T Consensus 486 ~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~ 531 (781)
T 3v9f_A 486 DTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVRKFN 531 (781)
T ss_dssp CTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEEEEEC
T ss_pred cCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEEEcc
Confidence 3321 11 133444555677887776566999999999888763
No 159
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=63.82 E-value=1e+02 Score=29.23 Aligned_cols=157 Identities=8% Similarity=0.012 Sum_probs=81.7
Q ss_pred eCCceEEEEEeeEeCCCcEEEEEEeCCC--ceEEecccCCccCccCCCce-EECCeEEEEEecCCCCeEEEEEECCCce-
Q 047931 148 TAEDCKFIKVSFGLKPNMSVAIFSLRMN--SWRRVLASGYTRPLINVPGT-LTNGALHWRLQKHGGDFVLAAFDLVEER- 223 (339)
Q Consensus 148 ~~~~ykvv~~~~~~~~~~~~~vyss~~~--~W~~~~~~~~~~~~~~~~~v-~~~G~lyw~~~~~~~~~~il~fD~~~~~- 223 (339)
.++.|-++... .......+.+++..++ .|+.+..-... ....+ .-++.+|.++..++....|+..|+.+..
T Consensus 243 pDg~~l~~~~~-~~~~~~~i~~~d~~~~~~~~~~l~~~~~~----~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~ 317 (693)
T 3iuj_A 243 EDDRFLLISAA-NSTSGNRLYVKDLSQENAPLLTVQGDLDA----DVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGP 317 (693)
T ss_dssp TTSCEEEEEEE-SSSSCCEEEEEETTSTTCCCEEEECSSSS----CEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCG
T ss_pred CCCCEEEEEEc-cCCCCcEEEEEECCCCCCceEEEeCCCCc----eEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCc
Confidence 34455444432 1112346777776554 67776322111 11123 3457788877654345789999998743
Q ss_pred --eeeecCCCCCCCCceeEEEEECCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecCC-CC-eeEEEEEeCC-eEEEE
Q 047931 224 --FKEFPLPDASTSFRFFGTGVLGDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQDP-NN-VWPLCLWKNS-TKLLV 298 (339)
Q Consensus 224 --~~~i~lP~~~~~~~~~~l~~~~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~-~~-~~~~~~~~~~-~i~~~ 298 (339)
|+.+ .|.... .. .+...++.|.+.......-.|+.++-. ..+.. .+..+ .+ ...+....++ .+++.
T Consensus 318 ~~~~~l-~~~~~~--~~-~~s~~g~~lv~~~~~~g~~~l~~~d~~---g~~~~--~l~~p~~~~~~~~~~~~d~~~l~~~ 388 (693)
T 3iuj_A 318 AHWRDL-IPERQQ--VL-TVHSGSGYLFAEYMVDATARVEQFDYE---GKRVR--EVALPGLGSVSGFNGKHDDPALYFG 388 (693)
T ss_dssp GGCEEE-ECCCSS--CE-EEEEETTEEEEEEEETTEEEEEEECTT---SCEEE--EECCSSSSEEEECCCCTTCSCEEEE
T ss_pred cccEEE-ecCCCC--EE-EEEEECCEEEEEEEECCeeEEEEEECC---CCeeE--EeecCCCceEEeeecCCCCCEEEEE
Confidence 5543 222221 12 444456777766665555555555432 23433 33321 21 1122222344 46665
Q ss_pred ECC----cEEEEEECCCCcEEEeE
Q 047931 299 INR----KNLLVCDCNNEGSEDVA 318 (339)
Q Consensus 299 ~~~----~~~~~yd~~t~~~~~v~ 318 (339)
..+ ..++.||+++++.+.+.
T Consensus 389 ~ss~~tP~~l~~~d~~~g~~~~l~ 412 (693)
T 3iuj_A 389 FENYAQPPTLYRFEPKSGAISLYR 412 (693)
T ss_dssp EECSSSCCEEEEECTTTCCEEEEE
T ss_pred ecCCCCCCEEEEEECCCCeEEEEE
Confidence 443 46999999999877664
No 160
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=63.23 E-value=65 Score=26.81 Aligned_cols=192 Identities=13% Similarity=0.061 Sum_probs=94.6
Q ss_pred eEEEccCCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-e-CCceEEEEEeeEeCCCcEEEEEEeCCCceEEe-
Q 047931 104 LVCTTPKPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-T-AEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRV- 180 (339)
Q Consensus 104 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~-~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~- 180 (339)
+++....+..+.|+|..+++....-..... ....+.+ . .+.+-+.+-. ...+.+|+.+++.-...
T Consensus 87 ~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~-------~i~~~~~~~~~~~~l~s~~~-----dg~i~iwd~~~~~~~~~~ 154 (366)
T 3k26_A 87 LLAVAGSRGIIRIINPITMQCIKHYVGHGN-------AINELKFHPRDPNLLLSVSK-----DHALRLWNIQTDTLVAIF 154 (366)
T ss_dssp EEEEEETTCEEEEECTTTCCEEEEEESCCS-------CEEEEEECSSCTTEEEEEET-----TSCEEEEETTTTEEEEEE
T ss_pred EEEEecCCCEEEEEEchhceEeeeecCCCC-------cEEEEEECCCCCCEEEEEeC-----CCeEEEEEeecCeEEEEe
Confidence 344444567899999888765432211111 1555555 3 3444333322 45688888887644322
Q ss_pred cccCCccCccCCCceEE--CCeEEEEEecCCCCeEEEEEECCCceeee-ec--------------------CCCC----C
Q 047931 181 LASGYTRPLINVPGTLT--NGALHWRLQKHGGDFVLAAFDLVEERFKE-FP--------------------LPDA----S 233 (339)
Q Consensus 181 ~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~~~~~~-i~--------------------lP~~----~ 233 (339)
....... ..-..+.+ +|.....+..+ ..|..+|+.+.+... +. .|.. .
T Consensus 155 ~~~~~~~--~~v~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (366)
T 3k26_A 155 GGVEGHR--DEVLSADYDLLGEKIMSCGMD---HSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDI 229 (366)
T ss_dssp CSTTSCS--SCEEEEEECTTSSEEEEEETT---SCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSS
T ss_pred ccccccc--CceeEEEECCCCCEEEEecCC---CCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccC
Confidence 1111110 00111222 24433333332 478888988754321 11 0000 0
Q ss_pred CCCceeEEEEECCeEEEEEeCCCeEEEEEEcccCC--------CCCeEEEEEecCC-CCeeEEEEEeC--CeEEEEEC-C
Q 047931 234 TSFRFFGTGVLGDCLCLQFFKGKMKEHWIMKEYGV--------KESWTRVFIHQDP-NNVWPLCLWKN--STKLLVIN-R 301 (339)
Q Consensus 234 ~~~~~~~l~~~~G~L~~v~~~~~~l~iW~l~~~~~--------~~~W~~~~~i~~~-~~~~~~~~~~~--~~i~~~~~-~ 301 (339)
.......+... |.+.+....+..+.+|.+..... .........+... -.+.-+++.++ +.+++... +
T Consensus 230 ~~~~v~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~d 308 (366)
T 3k26_A 230 HRNYVDCVRWL-GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV 308 (366)
T ss_dssp CSSCCCEEEEE-TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTT
T ss_pred CcceEEEEEEc-CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecC
Confidence 00011122223 66666666888999999975321 1123333444321 11344555666 77666554 4
Q ss_pred cEEEEEECCCCc
Q 047931 302 KNLLVCDCNNEG 313 (339)
Q Consensus 302 ~~~~~yd~~t~~ 313 (339)
+.+.+||+++++
T Consensus 309 g~i~vwd~~~~~ 320 (366)
T 3k26_A 309 GKLYVWDLEVED 320 (366)
T ss_dssp SCEEEEECCSSS
T ss_pred CcEEEEECCCCC
Confidence 569999999875
No 161
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=63.01 E-value=19 Score=29.99 Aligned_cols=29 Identities=14% Similarity=-0.001 Sum_probs=16.9
Q ss_pred CCeEEEEEecCCCCeEEEEEECCCceeeeecCC
Q 047931 198 NGALHWRLQKHGGDFVLAAFDLVEERFKEFPLP 230 (339)
Q Consensus 198 ~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP 230 (339)
+|.+|. +... ..+.+||...+......++
T Consensus 147 ~g~l~v-gt~~---~~l~~~d~~g~~~~~~~~~ 175 (330)
T 3hxj_A 147 DGTIYV-GSND---NYLYAINPDGTEKWRFKTN 175 (330)
T ss_dssp TSCEEE-ECTT---SEEEEECTTSCEEEEEECS
T ss_pred CCEEEE-EcCC---CEEEEECCCCCEeEEEecC
Confidence 566554 4432 3899999984443344444
No 162
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=62.35 E-value=66 Score=26.63 Aligned_cols=105 Identities=7% Similarity=-0.027 Sum_probs=58.6
Q ss_pred CCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEE
Q 047931 198 NGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVF 276 (339)
Q Consensus 198 ~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~ 276 (339)
+|.+||..... ..|..+|..++.-..+..+.. ...++.. +|+|+++........|+.++.. +.+.....
T Consensus 42 ~g~lyv~d~~~---~~I~~~d~~g~~~~~~~~~~~-----p~gia~~~dG~l~vad~~~~~~~v~~~d~~--~g~~~~~~ 111 (306)
T 2p4o_A 42 DGTIFVTNHEV---GEIVSITPDGNQQIHATVEGK-----VSGLAFTSNGDLVATGWNADSIPVVSLVKS--DGTVETLL 111 (306)
T ss_dssp TSCEEEEETTT---TEEEEECTTCCEEEEEECSSE-----EEEEEECTTSCEEEEEECTTSCEEEEEECT--TSCEEEEE
T ss_pred CCCEEEEeCCC---CeEEEECCCCceEEEEeCCCC-----ceeEEEcCCCcEEEEeccCCcceEEEEcCC--CCeEEEEE
Confidence 68999987443 479999998765444454421 2234444 7888877764333455665421 23454444
Q ss_pred EecC-CCCeeEEEEEeCCeEEEEE-CCcEEEEEECCCCc
Q 047931 277 IHQD-PNNVWPLCLWKNSTKLLVI-NRKNLLVCDCNNEG 313 (339)
Q Consensus 277 ~i~~-~~~~~~~~~~~~~~i~~~~-~~~~~~~yd~~t~~ 313 (339)
.++. .. ..-.+.+.++.+++.. ....++.+|..+++
T Consensus 112 ~~~~~~~-~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~ 149 (306)
T 2p4o_A 112 TLPDAIF-LNGITPLSDTQYLTADSYRGAIWLIDVVQPS 149 (306)
T ss_dssp ECTTCSC-EEEEEESSSSEEEEEETTTTEEEEEETTTTE
T ss_pred eCCCccc-cCcccccCCCcEEEEECCCCeEEEEeCCCCc
Confidence 4432 11 1122234444555544 24579999998764
No 163
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=61.58 E-value=1.7 Score=38.09 Aligned_cols=27 Identities=19% Similarity=-0.006 Sum_probs=17.9
Q ss_pred CceEECCeEEEEEecCCCCeEEEEEECCCce
Q 047931 193 PGTLTNGALHWRLQKHGGDFVLAAFDLVEER 223 (339)
Q Consensus 193 ~~v~~~G~lyw~~~~~~~~~~il~fD~~~~~ 223 (339)
.++..+|.+|.-..++ .+.++|.++.+
T Consensus 4 sP~v~~~~v~~gs~dg----~v~a~d~~tG~ 30 (369)
T 2hz6_A 4 TVTLPETLLFVSTLDG----SLHAVSKRTGS 30 (369)
T ss_dssp ----CTTEEEEEETTS----EEEEEETTTCC
T ss_pred CCeeeCCEEEEEcCCC----EEEEEECCCCC
Confidence 4566788888776655 89999987654
No 164
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=60.61 E-value=90 Score=27.62 Aligned_cols=108 Identities=7% Similarity=-0.027 Sum_probs=61.1
Q ss_pred CCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCe-EEEEEeC---CCeEEEEEEcccCCCCCe
Q 047931 198 NGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDC-LCLQFFK---GKMKEHWIMKEYGVKESW 272 (339)
Q Consensus 198 ~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~-L~~v~~~---~~~l~iW~l~~~~~~~~W 272 (339)
+|.||+.... ..|..||+++++...+.-+ .. ....++.. +|+ |++.... .....+|...+ ..|
T Consensus 149 ~g~Lyv~d~~----~~I~~id~~~~~v~~~~~~--~~--~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~----g~~ 216 (430)
T 3tc9_A 149 HNHLYLVGEQ----HPTRLIDFEKEYVSTVYSG--LS--KVRTICWTHEADSMIITNDQNNNDRPNNYILTRE----SGF 216 (430)
T ss_dssp EEEEEEEEBT----EEEEEEETTTTEEEEEECC--CS--CEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG----GTS
T ss_pred CCeEEEEeCC----CcEEEEECCCCEEEEEecC--CC--CcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC----Cce
Confidence 3888887664 4899999999887766321 11 22344444 566 7777762 22334455543 223
Q ss_pred EEEEEecCCCCeeEEEEEe-CCeEEEEE-CCcEEEEEECCCCcEEEe
Q 047931 273 TRVFIHQDPNNVWPLCLWK-NSTKLLVI-NRKNLLVCDCNNEGSEDV 317 (339)
Q Consensus 273 ~~~~~i~~~~~~~~~~~~~-~~~i~~~~-~~~~~~~yd~~t~~~~~v 317 (339)
.....+..--...-+++.+ +|.+++.. ...+++.||+++++...+
T Consensus 217 ~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~ 263 (430)
T 3tc9_A 217 KVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPL 263 (430)
T ss_dssp CSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred eeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEE
Confidence 3112221100123455666 66777654 345799999998876433
No 165
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=60.59 E-value=80 Score=27.00 Aligned_cols=99 Identities=8% Similarity=0.102 Sum_probs=58.6
Q ss_pred eEEEEEECCCceeee-ec--CCCCCCCCceeEEEE--ECCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecC-CCCee
Q 047931 212 FVLAAFDLVEERFKE-FP--LPDASTSFRFFGTGV--LGDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQD-PNNVW 285 (339)
Q Consensus 212 ~~il~fD~~~~~~~~-i~--lP~~~~~~~~~~l~~--~~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~-~~~~~ 285 (339)
..|..+|+.+.+... +. .|..... ....+.. .++.+.+....+..+.+|.++..+ . .+..+.. .-.+.
T Consensus 180 ~~i~~wd~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~--~---~~~~~~~h~~~v~ 253 (380)
T 3iz6_a 180 QTCVLWDVTTGQRISIFGSEFPSGHTA-DVLSLSINSLNANMFISGSCDTTVRLWDLRITS--R---AVRTYHGHEGDIN 253 (380)
T ss_dssp SCEEEECTTTCCEEEEECCCSSSSCCS-CEEEEEECSSSCCEEEEEETTSCEEEEETTTTC--C---CCEEECCCSSCCC
T ss_pred CcEEEEEcCCCcEEEEeecccCCCCcc-CeEEEEeecCCCCEEEEEECCCeEEEEECCCCC--c---ceEEECCcCCCeE
Confidence 478889998865433 32 2222211 1222332 267787777788899999987422 1 1123322 11255
Q ss_pred EEEEEeCCeEEEEEC-CcEEEEEECCCCcEEE
Q 047931 286 PLCLWKNSTKLLVIN-RKNLLVCDCNNEGSED 316 (339)
Q Consensus 286 ~~~~~~~~~i~~~~~-~~~~~~yd~~t~~~~~ 316 (339)
-+++.++|..++... ++.+..||+++++...
T Consensus 254 ~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~ 285 (380)
T 3iz6_a 254 SVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQ 285 (380)
T ss_dssp EEEECTTSSEEEEECSSSCEEEEETTTTEEEE
T ss_pred EEEEecCCCeEEEEcCCCeEEEEECCCCcEEE
Confidence 677778887666554 5569999999876443
No 166
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=60.34 E-value=99 Score=27.97 Aligned_cols=95 Identities=6% Similarity=0.034 Sum_probs=57.2
Q ss_pred eEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecC-CCCeeEEEE
Q 047931 212 FVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQD-PNNVWPLCL 289 (339)
Q Consensus 212 ~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~-~~~~~~~~~ 289 (339)
..|..+|...+....+..... ....+... +|++.+....+..+.||.... ..+.++.. .-.+.-+++
T Consensus 448 ~~v~~w~~~~~~~~~~~~~~~----~v~~~~~spd~~~las~~~d~~i~iw~~~~-------~~~~~~~~h~~~v~~l~~ 516 (577)
T 2ymu_A 448 KTVKLWNRNGQLLQTLTGHSS----SVRGVAFSPDGQTIASASDDKTVKLWNRNG-------QLLQTLTGHSSSVRGVAF 516 (577)
T ss_dssp SEEEEEETTSCEEEEEECCSS----CEEEEEECTTSCEEEEEETTSEEEEEETTS-------CEEEEEECCSSCEEEEEE
T ss_pred CEEEEEECCCCEEEEEcCCCC----CEEEEEEcCCCCEEEEEeCCCEEEEEcCCC-------CEEEEEeCCCCCEEEEEE
Confidence 467778876665555432211 12233333 788777777888999997431 12334432 222566778
Q ss_pred EeCCeEEEEE-CCcEEEEEECCCCcEEEe
Q 047931 290 WKNSTKLLVI-NRKNLLVCDCNNEGSEDV 317 (339)
Q Consensus 290 ~~~~~i~~~~-~~~~~~~yd~~t~~~~~v 317 (339)
.++|+.++.. .++.+.+||...+.++.+
T Consensus 517 s~dg~~l~s~~~dg~v~lwd~~~~~~~~~ 545 (577)
T 2ymu_A 517 SPDGQTIASASDDKTVKLWNRNGQLLQTL 545 (577)
T ss_dssp CTTSSCEEEEETTSEEEEECTTSCEEEEE
T ss_pred cCCCCEEEEEECcCEEEEEeCCCCEEEEE
Confidence 8888766644 456799999866655554
No 167
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=59.88 E-value=1.2e+02 Score=28.88 Aligned_cols=162 Identities=12% Similarity=0.069 Sum_probs=89.9
Q ss_pred eEEee-eCCceEEEEEeeEeC-CCcEEEEEEeCCC--c-eEEecccCCccCccCCCceE-ECCeEEEEEecCCCCeEEEE
Q 047931 143 YGFGC-TAEDCKFIKVSFGLK-PNMSVAIFSLRMN--S-WRRVLASGYTRPLINVPGTL-TNGALHWRLQKHGGDFVLAA 216 (339)
Q Consensus 143 ~~~g~-~~~~ykvv~~~~~~~-~~~~~~vyss~~~--~-W~~~~~~~~~~~~~~~~~v~-~~G~lyw~~~~~~~~~~il~ 216 (339)
.+..+ .++.|-++... ... ....+.+.+..++ . |+.+....... ...+. -++.+|+..........|..
T Consensus 271 ~~~~~SpDG~~l~~~~~-~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~----~~~~~~dg~~l~~~s~~~~~~~~l~~ 345 (741)
T 1yr2_A 271 HGASVSSDGRWVVITSS-EGTDPVNTVHVARVTNGKIGPVTALIPDLKAQ----WDFVDGVGDQLWFVSGDGAPLKKIVR 345 (741)
T ss_dssp EEEEECTTSCEEEEEEE-CTTCSCCEEEEEEEETTEECCCEEEECSSSSC----EEEEEEETTEEEEEECTTCTTCEEEE
T ss_pred EEEEECCCCCEEEEEEE-ccCCCcceEEEEECCCCCCcccEEecCCCCce----EEEEeccCCEEEEEECCCCCCCEEEE
Confidence 34444 44555555443 111 2557788888776 6 88774221111 11223 34567776654333567999
Q ss_pred EECCC--ceeeeecCCCCCCCCceeEEEEECCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecCC-CC-eeEEEEEeC
Q 047931 217 FDLVE--ERFKEFPLPDASTSFRFFGTGVLGDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQDP-NN-VWPLCLWKN 292 (339)
Q Consensus 217 fD~~~--~~~~~i~lP~~~~~~~~~~l~~~~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~-~~-~~~~~~~~~ 292 (339)
.|+.+ ++|+.+- |.... ....+...++.|.+....+....||.++-.+ . ....+..+ .+ ...+++.++
T Consensus 346 ~d~~~~~~~~~~l~-~~~~~--~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g--~---~~~~l~~~~~~~v~~~~~s~d 417 (741)
T 1yr2_A 346 VDLSGSTPRFDTVV-PESKD--NLESVGIAGNRLFASYIHDAKSQVLAFDLDG--K---PAGAVSLPGIGSASGLSGRPG 417 (741)
T ss_dssp EECSSSSCEEEEEE-CCCSS--EEEEEEEEBTEEEEEEEETTEEEEEEEETTS--C---EEEECBCSSSCEEEEEECCBT
T ss_pred EeCCCCccccEEEe-cCCCC--eEEEEEEECCEEEEEEEECCEEEEEEEeCCC--C---ceeeccCCCCeEEEEeecCCC
Confidence 99987 5676653 33221 1123344588888777777788899887322 2 23344432 21 233344455
Q ss_pred Ce-EEEEECC----cEEEEEECCCCcEEEe
Q 047931 293 ST-KLLVINR----KNLLVCDCNNEGSEDV 317 (339)
Q Consensus 293 ~~-i~~~~~~----~~~~~yd~~t~~~~~v 317 (339)
++ +++...+ ..++.||+++++.+.+
T Consensus 418 ~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l 447 (741)
T 1yr2_A 418 DRHAYLSFSSFTQPATVLALDPATAKTTPW 447 (741)
T ss_dssp CSCEEEEEEETTEEEEEEEEETTTTEEEEC
T ss_pred CCEEEEEEcCCCCCCEEEEEECCCCcEEEE
Confidence 54 5554332 3599999999886655
No 168
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=59.81 E-value=1.1e+02 Score=28.35 Aligned_cols=187 Identities=9% Similarity=-0.117 Sum_probs=95.4
Q ss_pred CCCEEEEEccccccee-ecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEEecccCCcc
Q 047931 110 KPKIFFVLNPLTRESK-RIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRVLASGYTR 187 (339)
Q Consensus 110 ~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~~ 187 (339)
..+.+.|+|+.|++.. .+|.... ..++.+ ..+.|-.+. . ....+.+|+..+..-+.+..++.+.
T Consensus 175 ~~~~V~viD~~t~~v~~~i~~g~~---------p~~v~~SpDGr~lyv~-~----~dg~V~viD~~~~t~~~v~~i~~G~ 240 (567)
T 1qks_A 175 DAGQIALIDGSTYEIKTVLDTGYA---------VHISRLSASGRYLFVI-G----RDGKVNMIDLWMKEPTTVAEIKIGS 240 (567)
T ss_dssp TTTEEEEEETTTCCEEEEEECSSC---------EEEEEECTTSCEEEEE-E----TTSEEEEEETTSSSCCEEEEEECCS
T ss_pred CCCeEEEEECCCCeEEEEEeCCCC---------ccceEECCCCCEEEEE-c----CCCeEEEEECCCCCCcEeEEEecCC
Confidence 4679999999998754 4443221 234455 344554433 1 1346888887522223333333221
Q ss_pred CccCCCceEE-----CCe-EEEEEecCCCCeEEEEEECCCcee-eeecCCCCCCC------C-ceeEEEEE-CCeEEEEE
Q 047931 188 PLINVPGTLT-----NGA-LHWRLQKHGGDFVLAAFDLVEERF-KEFPLPDASTS------F-RFFGTGVL-GDCLCLQF 252 (339)
Q Consensus 188 ~~~~~~~v~~-----~G~-lyw~~~~~~~~~~il~fD~~~~~~-~~i~lP~~~~~------~-~~~~l~~~-~G~L~~v~ 252 (339)
. .....+. +|+ +|-.+... ..+..+|..+.+. ..+++.....+ . .-..+... ++..+++.
T Consensus 241 ~--P~~ia~s~~~~pDGk~l~v~n~~~---~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~ 315 (567)
T 1qks_A 241 E--ARSIETSKMEGWEDKYAIAGAYWP---PQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVN 315 (567)
T ss_dssp E--EEEEEECCSTTCTTTEEEEEEEET---TEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEE
T ss_pred C--CceeEEccccCCCCCEEEEEEccC---CeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEE
Confidence 1 1111222 575 44444443 4788899887554 34454321100 0 11122222 44555555
Q ss_pred e-CCCeEEEEEEcccCCCCCeEEEEEecCCCCeeEEEEEeCCeEEEEEC--CcEEEEEECCCCcEE-EeEE
Q 047931 253 F-KGKMKEHWIMKEYGVKESWTRVFIHQDPNNVWPLCLWKNSTKLLVIN--RKNLLVCDCNNEGSE-DVAV 319 (339)
Q Consensus 253 ~-~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~i~~~~~--~~~~~~yd~~t~~~~-~v~~ 319 (339)
. ....+ |..+ +. .....++.+|...-...-+++..+|+.++... +.++.++|.+++++. .+.+
T Consensus 316 ~~~~g~v--~~vd-~~-~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~v 382 (567)
T 1qks_A 316 VKETGKI--LLVD-YT-DLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDT 382 (567)
T ss_dssp ETTTTEE--EEEE-TT-CSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEEC
T ss_pred ecCCCeE--EEEe-cC-CCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEec
Confidence 5 44444 4444 21 12345555564421245667778887666443 456999999999865 3444
No 169
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=59.74 E-value=73 Score=26.27 Aligned_cols=185 Identities=11% Similarity=-0.021 Sum_probs=96.1
Q ss_pred CceEEEcc---CCCEEEEEccccccee-ecCCCCCCCCCCCCCCeeEEee--eCCceEEEEEeeEeCCCcEEEEEEeCCC
Q 047931 102 NGLVCTTP---KPKIFFVLNPLTRESK-RIPDVPFEPFPRSSDDLYGFGC--TAEDCKFIKVSFGLKPNMSVAIFSLRMN 175 (339)
Q Consensus 102 ~GLl~~~~---~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~g~--~~~~ykvv~~~~~~~~~~~~~vyss~~~ 175 (339)
+|.|.... ..+.+.+.++.|++.. .+|... . ..+.|+ ..+ ++.... .....+.+|+..+.
T Consensus 31 dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~-~--------~fgeGi~~~g~--~lyv~t---~~~~~v~viD~~t~ 96 (266)
T 2iwa_A 31 NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDD-S--------YFGEGLTLLNE--KLYQVV---WLKNIGFIYDRRTL 96 (266)
T ss_dssp TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCT-T--------CCEEEEEEETT--EEEEEE---TTCSEEEEEETTTT
T ss_pred CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCC-C--------cceEEEEEeCC--EEEEEE---ecCCEEEEEECCCC
Confidence 36665553 2578999999999854 333222 1 223344 322 333322 23567888888764
Q ss_pred ceEEecccCCccCccCCCceEECCeEEEEEecCCCCeEEEEEECCCce-eeeecCCCCCCC-CceeEEEEECCeEEEEEe
Q 047931 176 SWRRVLASGYTRPLINVPGTLTNGALHWRLQKHGGDFVLAAFDLVEER-FKEFPLPDASTS-FRFFGTGVLGDCLCLQFF 253 (339)
Q Consensus 176 ~W~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~~~-~~~i~lP~~~~~-~~~~~l~~~~G~L~~v~~ 253 (339)
+.+..++.. . ...-++..+|.-.|++.. ...+..+|+++.+ .+.|++...... ..--.+...+|+||+...
T Consensus 97 --~v~~~i~~g-~-~~g~glt~Dg~~l~vs~g---s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~ 169 (266)
T 2iwa_A 97 --SNIKNFTHQ-M-KDGWGLATDGKILYGSDG---TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIW 169 (266)
T ss_dssp --EEEEEEECC-S-SSCCEEEECSSSEEEECS---SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEET
T ss_pred --cEEEEEECC-C-CCeEEEEECCCEEEEECC---CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecC
Confidence 334334333 1 123356777765556553 2589999999854 455554322100 001123333888886554
Q ss_pred CCCeEEEEEEcccCCCCCeEEEEEecCC-C-----------CeeEE--EEEeCCeEEEEEC--CcEEEEEECCCCc
Q 047931 254 KGKMKEHWIMKEYGVKESWTRVFIHQDP-N-----------NVWPL--CLWKNSTKLLVIN--RKNLLVCDCNNEG 313 (339)
Q Consensus 254 ~~~~l~iW~l~~~~~~~~W~~~~~i~~~-~-----------~~~~~--~~~~~~~i~~~~~--~~~~~~yd~~t~~ 313 (339)
... .|.+.+- .++..+.+|+.. + ...|. ++.++++-+|+.+ ..+++..++.+..
T Consensus 170 ~~~--~V~vID~----~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 170 QTD--CIARISA----KDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLVR 239 (266)
T ss_dssp TSS--EEEEEET----TTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEECC
T ss_pred CCC--eEEEEEC----CCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEeccc
Confidence 444 4566664 335555555431 0 12334 4455554444333 3357777766543
No 170
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=59.63 E-value=70 Score=26.02 Aligned_cols=140 Identities=11% Similarity=-0.005 Sum_probs=82.1
Q ss_pred CcEEEEEEeCCCceEEecccCCccCccCCCceEECCeEEEEEecCCCCeEEEEEECCCce-eeeecCCCCCCCCceeEEE
Q 047931 164 NMSVAIFSLRMNSWRRVLASGYTRPLINVPGTLTNGALHWRLQKHGGDFVLAAFDLVEER-FKEFPLPDASTSFRFFGTG 242 (339)
Q Consensus 164 ~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~~~-~~~i~lP~~~~~~~~~~l~ 242 (339)
...+.+++.+++.=.....++.. .....-...++.+|-+.... ..+.+||.++-+ ...++.|... ..|+
T Consensus 42 ~S~v~~vD~~tgkv~~~~~l~~~--~fgeGi~~~~~~ly~ltw~~---~~v~v~D~~tl~~~~ti~~~~~G-----wglt 111 (243)
T 3mbr_X 42 RSSVRKVDLETGRILQRAEVPPP--YFGAGIVAWRDRLIQLTWRN---HEGFVYDLATLTPRARFRYPGEG-----WALT 111 (243)
T ss_dssp SCEEEEEETTTCCEEEEEECCTT--CCEEEEEEETTEEEEEESSS---SEEEEEETTTTEEEEEEECSSCC-----CEEE
T ss_pred CceEEEEECCCCCEEEEEeCCCC--cceeEEEEeCCEEEEEEeeC---CEEEEEECCcCcEEEEEeCCCCc-----eEEe
Confidence 56888999988744332233322 11222345678999887664 589999998854 4566766422 2455
Q ss_pred EECCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecC-----CCC-eeEEEEEeCCeEEEEEC-CcEEEEEECCCCcE-
Q 047931 243 VLGDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQD-----PNN-VWPLCLWKNSTKLLVIN-RKNLLVCDCNNEGS- 314 (339)
Q Consensus 243 ~~~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~-----~~~-~~~~~~~~~~~i~~~~~-~~~~~~yd~~t~~~- 314 (339)
.-+++|++... .. .|+.++- ++=..+.+|.. ++. ..-+. +.+|+++.... ...+.+.|++|++.
T Consensus 112 ~dg~~L~vSdg-s~--~l~~iDp----~t~~~~~~I~V~~~g~~~~~lNeLe-~~~G~lyanvw~s~~I~vIDp~tG~V~ 183 (243)
T 3mbr_X 112 SDDSHLYMSDG-TA--VIRKLDP----DTLQQVGSIKVTAGGRPLDNLNELE-WVNGELLANVWLTSRIARIDPASGKVV 183 (243)
T ss_dssp ECSSCEEEECS-SS--EEEEECT----TTCCEEEEEECEETTEECCCEEEEE-EETTEEEEEETTTTEEEEECTTTCBEE
T ss_pred eCCCEEEEECC-CC--eEEEEeC----CCCeEEEEEEEccCCcccccceeeE-EeCCEEEEEECCCCeEEEEECCCCCEE
Confidence 55677777654 33 3666764 22233445533 111 11111 23778776553 45799999999995
Q ss_pred EEeEEeC
Q 047931 315 EDVAVAD 321 (339)
Q Consensus 315 ~~v~~~~ 321 (339)
..+.+.+
T Consensus 184 ~~idl~~ 190 (243)
T 3mbr_X 184 AWIDLQA 190 (243)
T ss_dssp EEEECGG
T ss_pred EEEECCc
Confidence 4666553
No 171
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=59.56 E-value=75 Score=26.37 Aligned_cols=67 Identities=7% Similarity=-0.026 Sum_probs=43.9
Q ss_pred CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecC-CCCeeEEEEEeCCeEEEEE-CCcEEEEEECCCCcEEE
Q 047931 245 GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQD-PNNVWPLCLWKNSTKLLVI-NRKNLLVCDCNNEGSED 316 (339)
Q Consensus 245 ~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~-~~~~~~~~~~~~~~i~~~~-~~~~~~~yd~~t~~~~~ 316 (339)
+|++.++...+..+.+|.++.. ......+.. .-.+.-+++.+++..++.. .++.+..||+++++...
T Consensus 186 ~~~~l~~~~~dg~i~i~d~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~ 254 (369)
T 3zwl_B 186 KGKYIIAGHKDGKISKYDVSNN-----YEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLK 254 (369)
T ss_dssp GGCEEEEEETTSEEEEEETTTT-----TEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCCEEEEEcCCCEEEEEECCCC-----cEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceee
Confidence 6676666667889999988741 233344433 1225566777777655544 56679999999887553
No 172
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=59.19 E-value=61 Score=26.82 Aligned_cols=67 Identities=4% Similarity=-0.078 Sum_probs=40.7
Q ss_pred CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecCCCCeeEEEEEeCCeEE-EEE-CCcEEEEEECCCCcEE
Q 047931 245 GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQDPNNVWPLCLWKNSTKL-LVI-NRKNLLVCDCNNEGSE 315 (339)
Q Consensus 245 ~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~i~-~~~-~~~~~~~yd~~t~~~~ 315 (339)
++.+++.......+.+|.++. .+-..........+..-+++.++|+.+ +.. .+..+..||+++++..
T Consensus 10 ~~~~~v~~~~~~~v~~~d~~~----~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~ 78 (349)
T 1jmx_B 10 GHEYMIVTNYPNNLHVVDVAS----DTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNT 78 (349)
T ss_dssp TCEEEEEEETTTEEEEEETTT----TEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCeEEEEECCC----CcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEE
Confidence 566777666778888887764 222222222221124456677787644 443 3457999999988754
No 173
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=59.12 E-value=78 Score=26.40 Aligned_cols=72 Identities=13% Similarity=-0.022 Sum_probs=45.1
Q ss_pred CeEEEEEeCCCeEEEEEEcccC--CCCCeEEEEEecC--CCCeeEEEEEeCCeEEEEECCcEEEEEECCCCcEEEe
Q 047931 246 DCLCLQFFKGKMKEHWIMKEYG--VKESWTRVFIHQD--PNNVWPLCLWKNSTKLLVINRKNLLVCDCNNEGSEDV 317 (339)
Q Consensus 246 G~L~~v~~~~~~l~iW~l~~~~--~~~~W~~~~~i~~--~~~~~~~~~~~~~~i~~~~~~~~~~~yd~~t~~~~~v 317 (339)
+.+.+....+..+.||.++... ....|.....+.. .-.+.-+++.+++.++-...++.+..||.++++++.+
T Consensus 211 ~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~ 286 (330)
T 2hes_X 211 VFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKVF 286 (330)
T ss_dssp SCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEEEE
T ss_pred eeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEEE
Confidence 3344444478899999987532 2346776666643 1224555665555455555666799999988876654
No 174
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=58.10 E-value=1.1e+02 Score=27.71 Aligned_cols=95 Identities=7% Similarity=0.080 Sum_probs=55.9
Q ss_pred eEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecC-CCCeeEEEE
Q 047931 212 FVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQD-PNNVWPLCL 289 (339)
Q Consensus 212 ~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~-~~~~~~~~~ 289 (339)
..|..+|...+....+..... ....+... +|++.+....+..+.+|.+.. . .+.++.. .-.+.-+++
T Consensus 407 ~~v~~~~~~~~~~~~~~~~~~----~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~----~---~~~~~~~~~~~v~~~~~ 475 (577)
T 2ymu_A 407 KTVKLWNRNGQLLQTLTGHSS----SVWGVAFSPDDQTIASASDDKTVKLWNRNG----Q---LLQTLTGHSSSVRGVAF 475 (577)
T ss_dssp SEEEEECTTCCEEEEEECCSS----CEEEEEECTTSSEEEEEETTSEEEEEETTS----C---EEEEEECCSSCEEEEEE
T ss_pred CEEEEEeCCCCEEEEecCCCC----CeEEEEECCCCCEEEEEcCCCEEEEEECCC----C---EEEEEcCCCCCEEEEEE
Confidence 367778866555554432221 12233333 677766666888999997542 1 2233332 222566778
Q ss_pred EeCCeEEEEE-CCcEEEEEECCCCcEEEe
Q 047931 290 WKNSTKLLVI-NRKNLLVCDCNNEGSEDV 317 (339)
Q Consensus 290 ~~~~~i~~~~-~~~~~~~yd~~t~~~~~v 317 (339)
.++++++... .++.+..||..++..+.+
T Consensus 476 spd~~~las~~~d~~i~iw~~~~~~~~~~ 504 (577)
T 2ymu_A 476 SPDGQTIASASDDKTVKLWNRNGQLLQTL 504 (577)
T ss_dssp CTTSCEEEEEETTSEEEEEETTSCEEEEE
T ss_pred cCCCCEEEEEeCCCEEEEEcCCCCEEEEE
Confidence 8888766654 456799999776655554
No 175
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=56.84 E-value=1e+02 Score=27.00 Aligned_cols=195 Identities=8% Similarity=-0.096 Sum_probs=97.2
Q ss_pred eCceEEEcc-CCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCc-e
Q 047931 101 CNGLVCTTP-KPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNS-W 177 (339)
Q Consensus 101 ~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~-W 177 (339)
.+|-|.+.+ ....+.++++.+++...+...... .. +.+ ..++ .++... ......+.+++..++. .
T Consensus 140 ~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~--------~~-ia~~~~g~-~l~~~d--~~~~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 140 GNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG--------GK-PAVTKDKQ-RVYSIG--WEGTHTVYVYMKASGWAP 207 (409)
T ss_dssp STTEEEEEETTTTEEEEEETTTTEEEEEEETCCB--------CB-CEECTTSS-EEEEEB--SSTTCEEEEEEGGGTTCE
T ss_pred CCCCEEEEecCCCcEEEEECCCCEEEEeeccCCC--------Cc-eeEecCCC-cEEEEe--cCCCceEEEEEcCCCcee
Confidence 456655544 457899999998887665433211 11 333 2222 222221 1112266677765432 3
Q ss_pred EEecccCCccCccCCCceEE---CCeEEEEEecCCCCeEEEEEECCCceeeeec-CCCCCCCCce-e-EEEEE--CCeEE
Q 047931 178 RRVLASGYTRPLINVPGTLT---NGALHWRLQKHGGDFVLAAFDLVEERFKEFP-LPDASTSFRF-F-GTGVL--GDCLC 249 (339)
Q Consensus 178 ~~~~~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~-lP~~~~~~~~-~-~l~~~--~G~L~ 249 (339)
+.+......... ...++.+ +|.+|+ +... ..|..+|+.+.....+. .+........ . .++.. +|.|+
T Consensus 208 ~~~g~~~~~~~~-~p~~iav~p~~g~lyv-~d~~---~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~ly 282 (409)
T 3hrp_A 208 TRIGQLGSTFSG-KIGAVALDETEEWLYF-VDSN---KNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFY 282 (409)
T ss_dssp EEEEECCTTSCS-CCCBCEECTTSSEEEE-ECTT---CEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEE
T ss_pred EEeeeccchhcC-CcEEEEEeCCCCeEEE-EECC---CcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEE
Confidence 333211110001 1122333 689999 3332 47999999887665551 1111111112 1 45544 68998
Q ss_pred EEEeCCCeEEEEEEcccCCCCCeEEEEEec-C-----------CCCeeEE--EEEeCCeEEEEEC--CcEEEEEECCCCc
Q 047931 250 LQFFKGKMKEHWIMKEYGVKESWTRVFIHQ-D-----------PNNVWPL--CLWKNSTKLLVIN--RKNLLVCDCNNEG 313 (339)
Q Consensus 250 ~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~-~-----------~~~~~~~--~~~~~~~i~~~~~--~~~~~~yd~~t~~ 313 (339)
+.......+..| +..+ .-....--. . .+ ..|. ++.++|.+++.-. +.++..+|+.+++
T Consensus 283 v~d~~~~~I~~~--~~~g---~~~~~~g~~~~~g~~dg~~~~~~~-~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~ 356 (409)
T 3hrp_A 283 MSDQNLSSVYKI--TPDG---ECEWFCGSATQKTVQDGLREEALF-AQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY 356 (409)
T ss_dssp EEETTTTEEEEE--CTTC---CEEEEEECTTCCSCBCEEGGGCBC-SSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE
T ss_pred EEeCCCCEEEEE--ecCC---CEEEEEeCCCCCCcCCCcccccEe-CCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE
Confidence 887766655444 3221 111111111 0 02 2344 4556778776643 4579999988888
Q ss_pred EEEeE
Q 047931 314 SEDVA 318 (339)
Q Consensus 314 ~~~v~ 318 (339)
+..+.
T Consensus 357 v~~~~ 361 (409)
T 3hrp_A 357 VSTVA 361 (409)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 77663
No 176
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=56.76 E-value=91 Score=26.44 Aligned_cols=186 Identities=6% Similarity=-0.072 Sum_probs=88.1
Q ss_pred eCceEEE-ccCCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceE
Q 047931 101 CNGLVCT-TPKPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWR 178 (339)
Q Consensus 101 ~~GLl~~-~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~ 178 (339)
-+|-.++ ...+..+.++|..+++....-..... ....+.+ ..++..++... ..-.+.+|+.+++.-.
T Consensus 149 pdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~-------~v~~v~~s~~~~~~~~s~~----~dg~v~~wd~~~~~~~ 217 (357)
T 4g56_B 149 SDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSS-------EVNCVAACPGKDTIFLSCG----EDGRILLWDTRKPKPA 217 (357)
T ss_dssp SSSSEEEEEETTSCEEEEETTTTEEEEEECCCSS-------CEEEEEECTTCSSCEEEEE----TTSCEEECCTTSSSCB
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCC-------CEEEEEEccCCCceeeeec----cCCceEEEECCCCcee
Confidence 3453333 23456788888888765432211111 1444555 23333333222 1345777777665322
Q ss_pred EecccCCccCccCCCceEE---CCeEEEEEecCCCCeEEEEEECCCcee-eeecCCCCCCCCceeEEEEE-CC-eEEEEE
Q 047931 179 RVLASGYTRPLINVPGTLT---NGALHWRLQKHGGDFVLAAFDLVEERF-KEFPLPDASTSFRFFGTGVL-GD-CLCLQF 252 (339)
Q Consensus 179 ~~~~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~il~fD~~~~~~-~~i~lP~~~~~~~~~~l~~~-~G-~L~~v~ 252 (339)
........ ......+.+ ++.+...+... ..|-.+|+.+.+. ..+..... ....+... +| ++.+..
T Consensus 218 ~~~~~~~~--~~~v~~v~~sp~~~~~la~g~~d---~~i~~wd~~~~~~~~~~~~~~~----~v~~l~~sp~~~~~lasg 288 (357)
T 4g56_B 218 TRIDFCAS--DTIPTSVTWHPEKDDTFACGDET---GNVSLVNIKNPDSAQTSAVHSQ----NITGLAYSYHSSPFLASI 288 (357)
T ss_dssp CBCCCTTC--CSCEEEEEECTTSTTEEEEEESS---SCEEEEESSCGGGCEEECCCSS----CEEEEEECSSSSCCEEEE
T ss_pred eeeeeccc--cccccchhhhhcccceEEEeecc---cceeEEECCCCcEeEEEeccce----eEEEEEEcCCCCCEEEEE
Confidence 11111000 001112332 23333333332 4678889887543 22332211 12234433 55 454445
Q ss_pred eCCCeEEEEEEcccCCCCCeEEEEEecCCCCeeEEEEEe-CCeEEEEE-CCcEEEEEECCCC
Q 047931 253 FKGKMKEHWIMKEYGVKESWTRVFIHQDPNNVWPLCLWK-NSTKLLVI-NRKNLLVCDCNNE 312 (339)
Q Consensus 253 ~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~-~~~i~~~~-~~~~~~~yd~~t~ 312 (339)
..+..+.||.++. . .....+...-.+.-+++.+ ++.+++.. .++.+..||+.++
T Consensus 289 s~D~~i~iwd~~~----~--~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 289 SEDCTVAVLDADF----S--EVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp ETTSCEEEECTTS----C--EEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred eCCCEEEEEECCC----C--cEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 5788999997653 1 2233333322255667775 66666644 4667999998664
No 177
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=56.75 E-value=98 Score=26.82 Aligned_cols=62 Identities=18% Similarity=0.133 Sum_probs=40.3
Q ss_pred CeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecC-CCCeeEEEEEeCCeEEEE-ECCcEEEEEECCCCc
Q 047931 246 DCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQD-PNNVWPLCLWKNSTKLLV-INRKNLLVCDCNNEG 313 (339)
Q Consensus 246 G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~-~~~~~~~~~~~~~~i~~~-~~~~~~~~yd~~t~~ 313 (339)
|.+.+....+..+.+|.++.. ....++.. .-.+.-+++.++|..++. ..++.+.+||.++++
T Consensus 308 g~~l~sgs~D~~i~iwd~~~~------~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~ 371 (410)
T 1vyh_C 308 GPFLLSGSRDKTIKMWDVSTG------MCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371 (410)
T ss_dssp CCEEEEEETTSEEEEEETTTT------EEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSC
T ss_pred CCEEEEEeCCCeEEEEECCCC------ceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 566666668889999988741 22334432 112556677777765554 456679999998876
No 178
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=56.25 E-value=88 Score=26.12 Aligned_cols=158 Identities=9% Similarity=-0.052 Sum_probs=0.0
Q ss_pred ceeEEEeeeCceEEEcc--CCCEEEEEcccccceeec----------CCCCCCCCCCCCCCeeEEee-eCCceEEEEEee
Q 047931 93 YLARIVGSCNGLVCTTP--KPKIFFVLNPLTRESKRI----------PDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSF 159 (339)
Q Consensus 93 ~~~~~~~s~~GLl~~~~--~~~~~~V~NP~T~~~~~L----------P~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~ 159 (339)
+....++..+|.+.+.+ ....+.++++-.+....+ |..-.. ..++.+ ..+..-.+.-.
T Consensus 145 P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~--------p~gia~d~~~g~l~v~d~- 215 (329)
T 3fvz_A 145 PTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSV--------PHSLALVPHLDQLCVADR- 215 (329)
T ss_dssp EEEEEECTTTCCEEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESC--------EEEEEEETTTTEEEEEET-
T ss_pred CcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCC--------CcEEEEECCCCEEEEEEC-
Q ss_pred EeCCCcEEEEEEeCCCceEEe------cccCCccCccCCCceEECCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCC
Q 047931 160 GLKPNMSVAIFSLRMNSWRRV------LASGYTRPLINVPGTLTNGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDAS 233 (339)
Q Consensus 160 ~~~~~~~~~vyss~~~~W~~~------~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~ 233 (339)
...++.+|+..++..... ..-+......+...+..+|.+|...... ..+..+|..+.+....--+...
T Consensus 216 ---~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~---~~v~~~~~~~g~~~~~~~~~~~ 289 (329)
T 3fvz_A 216 ---ENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEP---VQGFVMNFSSGEIIDVFKPVRK 289 (329)
T ss_dssp ---TTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCC---CCEEEEETTTCCEEEEECCSSS
T ss_pred ---CCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCC---cEEEEEEcCCCeEEEEEcCCCC
Q ss_pred CCCceeEEEEE-CCeEEEEEeCCCeEEEEEEcc
Q 047931 234 TSFRFFGTGVL-GDCLCLQFFKGKMKEHWIMKE 265 (339)
Q Consensus 234 ~~~~~~~l~~~-~G~L~~v~~~~~~l~iW~l~~ 265 (339)
.......++.. +|.|++......++.+|.++.
T Consensus 290 ~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 290 HFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp CCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred ccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
No 179
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=56.05 E-value=1e+02 Score=26.72 Aligned_cols=108 Identities=9% Similarity=-0.022 Sum_probs=61.0
Q ss_pred CeEEEEEecCCCCeEEEEEECCCcee-eeecCCCCCCCCceeEEEEE-CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEE
Q 047931 199 GALHWRLQKHGGDFVLAAFDLVEERF-KEFPLPDASTSFRFFGTGVL-GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVF 276 (339)
Q Consensus 199 G~lyw~~~~~~~~~~il~fD~~~~~~-~~i~lP~~~~~~~~~~l~~~-~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~ 276 (339)
|.+...+..+ ..|..+|+.+.+. ..+..|.... ....+... +|.+.+....+..+.||.++. ...+.
T Consensus 182 ~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~h~~--~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~------~~~~~ 250 (437)
T 3gre_A 182 KSLLVALTNL---SRVIIFDIRTLERLQIIENSPRHG--AVSSICIDEECCVLILGTTRGIIDIWDIRF------NVLIR 250 (437)
T ss_dssp CEEEEEEETT---SEEEEEETTTCCEEEEEECCGGGC--CEEEEEECTTSCEEEEEETTSCEEEEETTT------TEEEE
T ss_pred CCEEEEEeCC---CeEEEEeCCCCeeeEEEccCCCCC--ceEEEEECCCCCEEEEEcCCCeEEEEEcCC------ccEEE
Confidence 4444444443 5899999987654 4445442221 12233333 777777777888999999875 12233
Q ss_pred EecC--CCCeeEEEEE----eCCeEEEEEC-CcEEEEEECCCCcEEEe
Q 047931 277 IHQD--PNNVWPLCLW----KNSTKLLVIN-RKNLLVCDCNNEGSEDV 317 (339)
Q Consensus 277 ~i~~--~~~~~~~~~~----~~~~i~~~~~-~~~~~~yd~~t~~~~~v 317 (339)
++.. .-.+.-+++. .++.+++... ++.+..||+++++....
T Consensus 251 ~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 298 (437)
T 3gre_A 251 SWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYA 298 (437)
T ss_dssp EEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEE
T ss_pred EEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEE
Confidence 3322 1112233222 3455666554 45699999998875443
No 180
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=55.30 E-value=86 Score=25.71 Aligned_cols=92 Identities=4% Similarity=-0.016 Sum_probs=55.6
Q ss_pred eEEEEEECCCcee-eeecCCCCCCCCceeEEEE-ECCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecC-CCCeeEEE
Q 047931 212 FVLAAFDLVEERF-KEFPLPDASTSFRFFGTGV-LGDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQD-PNNVWPLC 288 (339)
Q Consensus 212 ~~il~fD~~~~~~-~~i~lP~~~~~~~~~~l~~-~~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~-~~~~~~~~ 288 (339)
..|..+|+++.+. +.+...... ...+.- .+|++.+....+..+.||.++.. ..+.++.. .-.+.-++
T Consensus 35 g~v~lWd~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~------~~~~~~~~h~~~v~~~~ 104 (304)
T 2ynn_A 35 GRVELWNYETQVEVRSIQVTETP----VRAGKFIARKNWIIVGSDDFRIRVFNYNTG------EKVVDFEAHPDYIRSIA 104 (304)
T ss_dssp SEEEEEETTTTEEEEEEECCSSC----EEEEEEEGGGTEEEEEETTSEEEEEETTTC------CEEEEEECCSSCEEEEE
T ss_pred CcEEEEECCCCceeEEeeccCCc----EEEEEEeCCCCEEEEECCCCEEEEEECCCC------cEEEEEeCCCCcEEEEE
Confidence 4788888887653 333322211 112222 26777777778899999988752 12334432 22256677
Q ss_pred EEeCCeEEEEE-CCcEEEEEECCCCc
Q 047931 289 LWKNSTKLLVI-NRKNLLVCDCNNEG 313 (339)
Q Consensus 289 ~~~~~~i~~~~-~~~~~~~yd~~t~~ 313 (339)
+.+++..++.. .++.+..||++++.
T Consensus 105 ~~~~~~~l~sgs~D~~v~lWd~~~~~ 130 (304)
T 2ynn_A 105 VHPTKPYVLSGSDDLTVKLWNWENNW 130 (304)
T ss_dssp ECSSSSEEEEEETTSCEEEEEGGGTT
T ss_pred EcCCCCEEEEECCCCeEEEEECCCCc
Confidence 77787766654 45569999998774
No 181
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=54.70 E-value=94 Score=25.99 Aligned_cols=71 Identities=13% Similarity=-0.001 Sum_probs=43.9
Q ss_pred CCeEEEEEeCCCeEEEEEEcccCCCCCe-EEEEEecCC-CCeeEEEEEeCCeEEEEE-CCcEEEEEECCCCcEE
Q 047931 245 GDCLCLQFFKGKMKEHWIMKEYGVKESW-TRVFIHQDP-NNVWPLCLWKNSTKLLVI-NRKNLLVCDCNNEGSE 315 (339)
Q Consensus 245 ~G~L~~v~~~~~~l~iW~l~~~~~~~~W-~~~~~i~~~-~~~~~~~~~~~~~i~~~~-~~~~~~~yd~~t~~~~ 315 (339)
+|.+.+....+..+.||.+......... .....+... -.+.-+++.+++.+++.. .++.+..||+++++..
T Consensus 38 d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~ 111 (343)
T 2xzm_R 38 DSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTY 111 (343)
T ss_dssp CCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEE
T ss_pred CCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEE
Confidence 6677666668889999999753211112 122333321 225566777777766644 4567999999887743
No 182
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=53.43 E-value=91 Score=25.42 Aligned_cols=69 Identities=13% Similarity=0.116 Sum_probs=48.1
Q ss_pred CCeEEEEEeCCCeEEEEEEcccC---CCCCeEEEEEecCC-CCeeEEEEEeC--CeEEEE-ECCcEEEEEECCCCc
Q 047931 245 GDCLCLQFFKGKMKEHWIMKEYG---VKESWTRVFIHQDP-NNVWPLCLWKN--STKLLV-INRKNLLVCDCNNEG 313 (339)
Q Consensus 245 ~G~L~~v~~~~~~l~iW~l~~~~---~~~~W~~~~~i~~~-~~~~~~~~~~~--~~i~~~-~~~~~~~~yd~~t~~ 313 (339)
+|.+.+....+..+.||.++... ....|.....+... -.+.-+++.++ +..++. ..++.+..||+++++
T Consensus 70 d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 70 YGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp GCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred CCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChH
Confidence 37777777788899999998632 23467777777542 22566677776 765554 456679999998776
No 183
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=52.05 E-value=1.2e+02 Score=26.50 Aligned_cols=144 Identities=13% Similarity=-0.016 Sum_probs=78.0
Q ss_pred CcEEEEEEeCCCceEEe--cccCCccCccCCCceEE-CCeEEEEEecCCCCeEEEEEECCCcee-eeecCCCC-------
Q 047931 164 NMSVAIFSLRMNSWRRV--LASGYTRPLINVPGTLT-NGALHWRLQKHGGDFVLAAFDLVEERF-KEFPLPDA------- 232 (339)
Q Consensus 164 ~~~~~vyss~~~~W~~~--~~~~~~~~~~~~~~v~~-~G~lyw~~~~~~~~~~il~fD~~~~~~-~~i~lP~~------- 232 (339)
...+.+|+..++.-... ...... -..+.+ +|.+...+..+ ..|..+|+.+.+. ..+.++..
T Consensus 219 d~~i~vwd~~~~~~~~~~~~~h~~~-----v~~~~~sd~~~l~s~~~d---~~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 290 (450)
T 2vdu_B 219 DEHIKISHYPQCFIVDKWLFGHKHF-----VSSICCGKDYLLLSAGGD---DKIFAWDWKTGKNLSTFDYNSLIKPYLND 290 (450)
T ss_dssp TSCEEEEEESCTTCEEEECCCCSSC-----EEEEEECSTTEEEEEESS---SEEEEEETTTCCEEEEEECHHHHGGGCCT
T ss_pred CCcEEEEECCCCceeeeeecCCCCc-----eEEEEECCCCEEEEEeCC---CeEEEEECCCCcEeeeecchhhhhhhhhh
Confidence 45678888876643221 111100 112222 56555544443 5889999988653 33332210
Q ss_pred --------------CCCCceeEEEEE-CCeEEEEEe-CCCeEEEEEEcccCCCCCeEEEEEecCCCCeeEEEEEeCCeEE
Q 047931 233 --------------STSFRFFGTGVL-GDCLCLQFF-KGKMKEHWIMKEYGVKESWTRVFIHQDPNNVWPLCLWKNSTKL 296 (339)
Q Consensus 233 --------------~~~~~~~~l~~~-~G~L~~v~~-~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~i~ 296 (339)
........+... +|+..++.. ....+.||.+.+. .+..+..+.++...-...-+++.+ +.++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~-~~~~l~~~~~~~~~~~v~~~~~~~-~~~~ 368 (450)
T 2vdu_B 291 QHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEK-QKGDLALKQIITFPYNVISLSAHN-DEFQ 368 (450)
T ss_dssp TSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSS-STTCEEEEEEEECSSCEEEEEEET-TEEE
T ss_pred cccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccC-CCCceeeccEeccCCceEEEEecC-CcEE
Confidence 000011223333 577666666 7889999999321 124577777775532245556666 4556
Q ss_pred EEECCc----------EEEEEECCCCcEEEe
Q 047931 297 LVINRK----------NLLVCDCNNEGSEDV 317 (339)
Q Consensus 297 ~~~~~~----------~~~~yd~~t~~~~~v 317 (339)
+..+.. .++.++.++++++..
T Consensus 369 v~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~ 399 (450)
T 2vdu_B 369 VTLDNKESSGVQKNFAKFIEYNLNENSFVVN 399 (450)
T ss_dssp EEECCTTCCSSCCCSEEEEEEETTTTEEEEC
T ss_pred EEEecccCCCCCCcceEEEEEEcCCCeEEEc
Confidence 554331 688889998888633
No 184
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=51.78 E-value=95 Score=25.15 Aligned_cols=196 Identities=7% Similarity=0.018 Sum_probs=89.5
Q ss_pred eeCceEEEccCCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceE
Q 047931 100 SCNGLVCTTPKPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWR 178 (339)
Q Consensus 100 s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~ 178 (339)
|.+|+|-.. .++.+.|||..|++...+-..... ......+.+ ..+.+-+.+-. .-.+.+++.+++.-.
T Consensus 34 S~~~~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~-----~~~V~~v~~~~~~~~l~sgs~-----Dg~v~iw~~~~~~~~ 102 (318)
T 4ggc_A 34 SSGNVLAVA-LDNSVYLWSASSGDILQLLQMEQP-----GEYISSVAWIKEGNYLAVGTS-----SAEVQLWDVQQQKRL 102 (318)
T ss_dssp CTTSEEEEE-ETTEEEEEETTTCCEEEEEECCST-----TCCEEEEEECTTSSEEEEEET-----TSEEEEEETTTTEEE
T ss_pred CCCCEEEEE-eCCEEEEEECCCCCEEEEEEecCC-----CCeEEEEEECCCCCEEEEEEC-----CCcEEEeecCCceeE
Confidence 456665443 257899999999986554322211 001455565 44455444332 456788888776432
Q ss_pred EecccCCccCccCCCceEECCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEE-EECCeEEEEEeCCCe
Q 047931 179 RVLASGYTRPLINVPGTLTNGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTG-VLGDCLCLQFFKGKM 257 (339)
Q Consensus 179 ~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~-~~~G~L~~v~~~~~~ 257 (339)
.. ..... ........++.+-..+... ..+...+..+.......+..... ....+. ..+|.+.+....+..
T Consensus 103 ~~--~~~h~--~~~~~~~~~~~~l~s~~~~---~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~s~~~d~~ 173 (318)
T 4ggc_A 103 RN--MTSHS--ARVGSLSWNSYILSSGSRS---GHIHHHDVRVAEHHVATLSGHSQ--EVCGLRWAPDGRHLASGGNDNL 173 (318)
T ss_dssp EE--EECCS--SCEEEEEEETTEEEEEETT---SEEEEEETTSSSCEEEEEECCSS--CEEEEEECTTSSEEEEEETTSC
T ss_pred EE--ecCcc--ceEEEeecCCCEEEEEecC---CceEeeecCCCceeEEEEcCccC--ceEEEEEcCCCCEEEEEecCcc
Confidence 21 11000 0011223333332222222 34555555544332222111111 112222 236777666668889
Q ss_pred EEEEEEcccCCCCCeEEEEEecCCC-CeeEEEEEeCC-eEEEE-EC--CcEEEEEECCCCcEEEe
Q 047931 258 KEHWIMKEYGVKESWTRVFIHQDPN-NVWPLCLWKNS-TKLLV-IN--RKNLLVCDCNNEGSEDV 317 (339)
Q Consensus 258 l~iW~l~~~~~~~~W~~~~~i~~~~-~~~~~~~~~~~-~i~~~-~~--~~~~~~yd~~t~~~~~v 317 (339)
+.||.+...... ........... ....++...++ .++.. .. +..+..+|.++.+....
T Consensus 174 i~iwd~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~ 236 (318)
T 4ggc_A 174 VNVWPSAPGEGG--WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSA 236 (318)
T ss_dssp EEEEESSCBTTB--SCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEE
T ss_pred eeEEECCCCccc--ccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccc
Confidence 999998753211 11111111111 12333333333 33332 22 23477777777665544
No 185
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=51.33 E-value=1e+02 Score=25.43 Aligned_cols=62 Identities=8% Similarity=0.116 Sum_probs=38.5
Q ss_pred eEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecCC-CCeeEEEEEeCC----eEEE-EECCcEEEEEECCC
Q 047931 247 CLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQDP-NNVWPLCLWKNS----TKLL-VINRKNLLVCDCNN 311 (339)
Q Consensus 247 ~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~-~~~~~~~~~~~~----~i~~-~~~~~~~~~yd~~t 311 (339)
++.+....+..+.||.++. ...|....++... -.+.-+++.+++ ..+. ...++.+..||+++
T Consensus 180 ~~l~sgs~D~~v~lWd~~~---~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 180 KRFASGGCDNLIKLWKEEE---DGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp CBEECCBTTSBCCEEEECT---TSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred ceEEEecCCCeEEEEEeCC---CCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 4444444788899999964 2458776666432 124555666554 4444 34566799999876
No 186
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=50.59 E-value=1.6e+02 Score=27.34 Aligned_cols=189 Identities=7% Similarity=-0.052 Sum_probs=97.3
Q ss_pred CEEEEEcccc------cceeecC-CCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeC----CCcEEEEEEeC-CCceE
Q 047931 112 KIFFVLNPLT------RESKRIP-DVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLK----PNMSVAIFSLR-MNSWR 178 (339)
Q Consensus 112 ~~~~V~NP~T------~~~~~LP-~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~----~~~~~~vyss~-~~~W~ 178 (339)
..++++|..+ ++...|. ..... .....+ .++.+-++.-. ... +...+.+++.. ++.+.
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~~--------~~~~~~SpDG~~la~~~~-~~~~~~~~~~~i~~~d~~~~g~~~ 231 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAHRF--------VTGPRLSPDGRQAVWLAW-DHPRMPWEGTELKTARVTEDGRFA 231 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCSSE--------ECCCEECTTSSEEEEEEE-CTTCCTTTCEEEEEEEECTTSCEE
T ss_pred eEEEEEECCCCccccCCceeEEEecCCCc--------ccCceECCCCCEEEEEEC-CCCCCCCCCcEEEEEEECCCCccc
Confidence 4789999988 7776665 32211 222333 23333333221 111 23578888988 57433
Q ss_pred EecccCCccCccCCCce-EECCeEEEEEecCCCCeEEEEEECCCceeeee-cCCCCCCC-Cc---eeEEEEE-CCeEEEE
Q 047931 179 RVLASGYTRPLINVPGT-LTNGALHWRLQKHGGDFVLAAFDLVEERFKEF-PLPDASTS-FR---FFGTGVL-GDCLCLQ 251 (339)
Q Consensus 179 ~~~~~~~~~~~~~~~~v-~~~G~lyw~~~~~~~~~~il~fD~~~~~~~~i-~lP~~~~~-~~---~~~l~~~-~G~L~~v 251 (339)
....+............ .-+|.+|+..... ....|..+|+++.++..+ +....... .+ ...+... +|++++.
T Consensus 232 ~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~-~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~ 310 (662)
T 3azo_A 232 DTRTLLGGPEEAIAQAEWAPDGSLIVATDRT-GWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVV 310 (662)
T ss_dssp EEEEEEEETTBCEEEEEECTTSCEEEEECTT-SSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEE
T ss_pred ccEEeCCCCCceEcceEECCCCeEEEEECCC-CCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEE
Confidence 32211111000001112 2378888776543 234788899877776654 32222110 00 1123444 7887776
Q ss_pred EeCCCeEEEEEEcccCCCCCeEEEEEecCCCC-eeEE-EEEeCCeEEEEEC-C---cEEEEEECCCCcEEEe
Q 047931 252 FFKGKMKEHWIMKEYGVKESWTRVFIHQDPNN-VWPL-CLWKNSTKLLVIN-R---KNLLVCDCNNEGSEDV 317 (339)
Q Consensus 252 ~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~-~~~~-~~~~~~~i~~~~~-~---~~~~~yd~~t~~~~~v 317 (339)
... ....||.++-.+ .. ..++....+ ...+ .. .++.+++... . ..++.+|+++++.+.+
T Consensus 311 ~~~-~~~~l~~~d~~~--~~---~~~l~~~~~~~~~~~s~-~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l 375 (662)
T 3azo_A 311 HGK-GAAVLGILDPES--GE---LVDAAGPWTEWAATLTV-SGTRAVGVAASPRTAYEVVELDTVTGRARTI 375 (662)
T ss_dssp EBS-SSCEEEEEETTT--TE---EEECCSSCCEEEEEEEE-ETTEEEEEEEETTEEEEEEEEETTTCCEEEE
T ss_pred EEc-CccEEEEEECCC--Cc---EEEecCCCCeEEEEEec-CCCEEEEEEcCCCCCCEEEEEECCCCceEEe
Confidence 667 889999987432 22 233433221 3333 22 2335555443 2 2589999999988776
No 187
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=49.51 E-value=1.2e+02 Score=25.74 Aligned_cols=138 Identities=8% Similarity=-0.030 Sum_probs=69.3
Q ss_pred CcEEEEEEeCCCceEEecccCCccCccCCCceEE--CCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEE
Q 047931 164 NMSVAIFSLRMNSWRRVLASGYTRPLINVPGTLT--NGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGT 241 (339)
Q Consensus 164 ~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l 241 (339)
...+.+++.+++.-...-..... -..+.+ +|.+...+..+ .+..++..+.+............ ....+
T Consensus 156 d~~i~iwd~~~~~~~~~~~~~~~-----V~~v~fspdg~~l~s~s~~----~~~~~~~~~~~~~~~~~~~~~~~-~v~~v 225 (365)
T 4h5i_A 156 PAIMRIIDPSDLTEKFEIETRGE-----VKDLHFSTDGKVVAYITGS----SLEVISTVTGSCIARKTDFDKNW-SLSKI 225 (365)
T ss_dssp SCEEEEEETTTTEEEEEEECSSC-----CCEEEECTTSSEEEEECSS----CEEEEETTTCCEEEEECCCCTTE-EEEEE
T ss_pred CCEEEEeECCCCcEEEEeCCCCc-----eEEEEEccCCceEEeccce----eEEEEEeccCcceeeeecCCCCC-CEEEE
Confidence 34577777776654332111111 112222 45544444333 56777777665443322211111 11123
Q ss_pred EE-ECCeEEEEEe-C-CC--eEEEEEEcccCCCCCeEE--EEEecCC-CCeeEEEEEeCCeEEEEE-CCcEEEEEECCCC
Q 047931 242 GV-LGDCLCLQFF-K-GK--MKEHWIMKEYGVKESWTR--VFIHQDP-NNVWPLCLWKNSTKLLVI-NRKNLLVCDCNNE 312 (339)
Q Consensus 242 ~~-~~G~L~~v~~-~-~~--~l~iW~l~~~~~~~~W~~--~~~i~~~-~~~~~~~~~~~~~i~~~~-~~~~~~~yd~~t~ 312 (339)
.- -+|+..+... + .. .+.+|.+.. ..... ...+... -.+.-+++.++|+++... .+..+.+||.+++
T Consensus 226 ~fspdg~~l~~~s~d~~~~~~i~~~~~~~----~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~ 301 (365)
T 4h5i_A 226 NFIADDTVLIAASLKKGKGIVLTKISIKS----GNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDL 301 (365)
T ss_dssp EEEETTEEEEEEEESSSCCEEEEEEEEET----TEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTT
T ss_pred EEcCCCCEEEEEecCCcceeEEeeccccc----ceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCC
Confidence 22 3777776665 2 22 455566554 11222 2334332 236677888888876654 4556999999988
Q ss_pred cEE
Q 047931 313 GSE 315 (339)
Q Consensus 313 ~~~ 315 (339)
+..
T Consensus 302 ~~~ 304 (365)
T 4h5i_A 302 SMS 304 (365)
T ss_dssp EEE
T ss_pred cEE
Confidence 743
No 188
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=49.24 E-value=1.1e+02 Score=25.14 Aligned_cols=179 Identities=6% Similarity=-0.083 Sum_probs=88.1
Q ss_pred EEEccCCCEEEEEcccccc----eeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEe-CCCceE
Q 047931 105 VCTTPKPKIFFVLNPLTRE----SKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSL-RMNSWR 178 (339)
Q Consensus 105 l~~~~~~~~~~V~NP~T~~----~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss-~~~~W~ 178 (339)
++....+..+.|+|..+++ ...+..... ....+.+ ..+.+.++... ....+.+|+. .++.-.
T Consensus 26 l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~--------~v~~~~~~~~~~~~l~~~~----~dg~i~~wd~~~~~~~~ 93 (342)
T 1yfq_A 26 LLITSWDGSLTVYKFDIQAKNVDLLQSLRYKH--------PLLCCNFIDNTDLQIYVGT----VQGEILKVDLIGSPSFQ 93 (342)
T ss_dssp EEEEETTSEEEEEEEETTTTEEEEEEEEECSS--------CEEEEEEEESSSEEEEEEE----TTSCEEEECSSSSSSEE
T ss_pred EEEEcCCCeEEEEEeCCCCccccceeeeecCC--------ceEEEEECCCCCcEEEEEc----CCCeEEEEEeccCCceE
Confidence 3333345678888877765 332221111 1445555 44552333332 2456888888 777655
Q ss_pred Eecc--cCCccCccCCCceEEC-CeEEEEEecCCCCeEEEEEECCC---------cee-eeecCCCCCCCCceeEEEEEC
Q 047931 179 RVLA--SGYTRPLINVPGTLTN-GALHWRLQKHGGDFVLAAFDLVE---------ERF-KEFPLPDASTSFRFFGTGVLG 245 (339)
Q Consensus 179 ~~~~--~~~~~~~~~~~~v~~~-G~lyw~~~~~~~~~~il~fD~~~---------~~~-~~i~lP~~~~~~~~~~l~~~~ 245 (339)
.+.. ..... ..+.+. |.....+..+ ..|..+|+.+ .+. ..+..+. ....+....
T Consensus 94 ~~~~~~~~~~v-----~~l~~~~~~~l~s~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~ 160 (342)
T 1yfq_A 94 ALTNNEANLGI-----CRICKYGDDKLIAASWD---GLIEVIDPRNYGDGVIAVKNLNSNNTKVKN-----KIFTMDTNS 160 (342)
T ss_dssp ECBSCCCCSCE-----EEEEEETTTEEEEEETT---SEEEEECHHHHTTBCEEEEESCSSSSSSCC-----CEEEEEECS
T ss_pred eccccCCCCce-----EEEEeCCCCEEEEEcCC---CeEEEEcccccccccccccCCeeeEEeeCC-----ceEEEEecC
Confidence 5433 11111 112221 3333333332 4788888775 321 1112111 122333344
Q ss_pred CeEEEEEeCCCeEEEEEEcc-cCCCCCeEEEEEecCCCCeeEEEEEe-CCeEEEE-ECCcEEEEEECCCC
Q 047931 246 DCLCLQFFKGKMKEHWIMKE-YGVKESWTRVFIHQDPNNVWPLCLWK-NSTKLLV-INRKNLLVCDCNNE 312 (339)
Q Consensus 246 G~L~~v~~~~~~l~iW~l~~-~~~~~~W~~~~~i~~~~~~~~~~~~~-~~~i~~~-~~~~~~~~yd~~t~ 312 (339)
+. .++...+..+.+|.++. .. ..... ..........-+++.+ +++.++. ..++.+..||.+++
T Consensus 161 ~~-l~~~~~d~~i~i~d~~~~~~--~~~~~-~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 161 SR-LIVGMNNSQVQWFRLPLCED--DNGTI-EESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQ 226 (342)
T ss_dssp SE-EEEEESTTEEEEEESSCCTT--CCCEE-EECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTT
T ss_pred Cc-EEEEeCCCeEEEEECCcccc--cccee-eecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCC
Confidence 44 44445788999999885 22 11211 1112222355667776 6665554 45567888888765
No 189
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=47.93 E-value=1.8e+02 Score=27.19 Aligned_cols=115 Identities=8% Similarity=-0.018 Sum_probs=59.5
Q ss_pred CCceEECCeEEEEEe-cCCCCeEEEEEEC-CCc--eeeeecCCCCC-------CCCceeEEEE--ECCe----EEEEEeC
Q 047931 192 VPGTLTNGALHWRLQ-KHGGDFVLAAFDL-VEE--RFKEFPLPDAS-------TSFRFFGTGV--LGDC----LCLQFFK 254 (339)
Q Consensus 192 ~~~v~~~G~lyw~~~-~~~~~~~il~fD~-~~~--~~~~i~lP~~~-------~~~~~~~l~~--~~G~----L~~v~~~ 254 (339)
..++..+|.+|.... .+ .+.++|. ++. .|+. .++... .+.....++. .+|+ |++...+
T Consensus 56 ~tP~v~~g~vyv~~~~~~----~v~AlD~~~tG~~lW~~-~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~d 130 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSFPN----NTFALGLDDPGTILWQD-KPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLD 130 (599)
T ss_dssp SCCEEETTEEEEECSTTT----CEEEEETTCTTSEEEEE-CCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTT
T ss_pred eccEEECCEEEEEeCCCC----EEEEEeCCCCCcEEEEE-CCCCCccccccccccccccceEEEecCCcceeEEEEEcCC
Confidence 457889999998876 44 7999999 654 4554 222111 0001112334 4555 5543322
Q ss_pred CCeEEEEEEcccCCCCCeEEEEEec-C--CCCeeEEEEEeCCeEEEEEC------CcEEEEEECCCCcEEE
Q 047931 255 GKMKEHWIMKEYGVKESWTRVFIHQ-D--PNNVWPLCLWKNSTKLLVIN------RKNLLVCDCNNEGSED 316 (339)
Q Consensus 255 ~~~l~iW~l~~~~~~~~W~~~~~i~-~--~~~~~~~~~~~~~~i~~~~~------~~~~~~yd~~t~~~~~ 316 (339)
.. +..|+-...+..|.....-. . .+...|+.. +|.|++... +..++.||.+|++...
T Consensus 131 -g~--l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~--~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W 196 (599)
T 1w6s_A 131 -GN--VAALNAETGETVWKVENSDIKVGSTLTIAPYVV--KDKVIIGSSGAELGVRGYLTAYDVKTGEQVW 196 (599)
T ss_dssp -SE--EEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE--TTEEEECCBCGGGTCCCEEEEEETTTCCEEE
T ss_pred -CE--EEEEECCCCCEEEeecCCCCCccceeecCCEEE--CCEEEEEecccccCCCCeEEEEECCCCcEEE
Confidence 22 33444222234566432110 0 121334432 455555442 4579999999998654
No 190
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=47.67 E-value=1.3e+02 Score=25.45 Aligned_cols=178 Identities=7% Similarity=-0.099 Sum_probs=84.7
Q ss_pred CCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEEecccCCccC
Q 047931 110 KPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRVLASGYTRP 188 (339)
Q Consensus 110 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~~~ 188 (339)
.+..+.|+|..|++....-..+.. ....+.+ ..+...++... ....+.+++.+++.-...-.....
T Consensus 147 ~d~~i~iwd~~~~~~~~~~~~h~~-------~V~~~~~~~~~~~~l~s~s----~D~~v~iwd~~~~~~~~~~~~~~~-- 213 (344)
T 4gqb_B 147 KDICIKVWDLAQQVVLSSYRAHAA-------QVTCVAASPHKDSVFLSCS----EDNRILLWDTRCPKPASQIGCSAP-- 213 (344)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSS-------CEEEEEECSSCTTEEEEEE----TTSCEEEEETTSSSCEEECC------
T ss_pred CCCeEEEEECCCCcEEEEEcCcCC-------ceEEEEecCCCCCceeeec----cccccccccccccceeeeeeccee--
Confidence 456788888888765432221111 1444555 33333333322 234678888877643322111100
Q ss_pred ccCCCceEE---CCeEEEEEecCCCCeEEEEEECCCcee-eeecCCCCCCCCceeEEEEE-CC-eEEEEEeCCCeEEEEE
Q 047931 189 LINVPGTLT---NGALHWRLQKHGGDFVLAAFDLVEERF-KEFPLPDASTSFRFFGTGVL-GD-CLCLQFFKGKMKEHWI 262 (339)
Q Consensus 189 ~~~~~~v~~---~G~lyw~~~~~~~~~~il~fD~~~~~~-~~i~lP~~~~~~~~~~l~~~-~G-~L~~v~~~~~~l~iW~ 262 (339)
.....++.+ ++.+...+..+ ..|-.+|+++.+. ..+..... .-..+.-. +| ++.+....+..+.||.
T Consensus 214 ~~~~~~~~~~p~~~~~l~sg~~d---g~v~~wd~~~~~~~~~~~~h~~----~v~~v~fsp~g~~~lasgs~D~~i~vwd 286 (344)
T 4gqb_B 214 GYLPTSLAWHPQQSEVFVFGDEN---GTVSLVDTKSTSCVLSSAVHSQ----CVTGLVFSPHSVPFLASLSEDCSLAVLD 286 (344)
T ss_dssp CCCEEEEEECSSCTTEEEEEETT---SEEEEEESCC--CCEEEECCSS----CEEEEEECSSSSCCEEEEETTSCEEEEC
T ss_pred eccceeeeecCCCCcceEEeccC---CcEEEEECCCCcEEEEEcCCCC----CEEEEEEccCCCeEEEEEeCCCeEEEEE
Confidence 000111222 23333333332 4788889887653 22222111 12233333 45 4555555788999996
Q ss_pred EcccCCCCCeEEEEEec-CCCCeeEEEEEeCCe-EEEE-ECCcEEEEEECCCCcE
Q 047931 263 MKEYGVKESWTRVFIHQ-DPNNVWPLCLWKNST-KLLV-INRKNLLVCDCNNEGS 314 (339)
Q Consensus 263 l~~~~~~~~W~~~~~i~-~~~~~~~~~~~~~~~-i~~~-~~~~~~~~yd~~t~~~ 314 (339)
++. . . ..+.. ..-.+.-+++.++|. ++.. ..++.+..|++.++.+
T Consensus 287 ~~~----~--~-~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 287 SSL----S--E-LFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp TTC----C--E-EEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC---
T ss_pred CCC----C--c-EEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCC
Confidence 653 1 1 22232 222256677777764 5554 3466799999988654
No 191
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=47.44 E-value=1.2e+02 Score=24.90 Aligned_cols=95 Identities=6% Similarity=-0.042 Sum_probs=52.1
Q ss_pred EEEEEECCCceeeeecCCCCCCCCceeEEEEE---CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecC-CCCeeEEE
Q 047931 213 VLAAFDLVEERFKEFPLPDASTSFRFFGTGVL---GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQD-PNNVWPLC 288 (339)
Q Consensus 213 ~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~---~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~-~~~~~~~~ 288 (339)
.+..+|+....-.......... ....+... .+.+.+....+..+.+|.++. ...+..+.. .-.+.-++
T Consensus 151 ~~~~~d~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~------~~~~~~~~~h~~~v~~~~ 222 (340)
T 4aow_A 151 TIKLWNTLGVCKYTVQDESHSE--WVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN------CKLKTNHIGHTGYLNTVT 222 (340)
T ss_dssp CEEEECTTSCEEEEECSSSCSS--CEEEEEECSCSSSCEEEEEETTSCEEEEETTT------TEEEEEECCCSSCEEEEE
T ss_pred eEEEEEeCCCceEEEEeccccC--cccceEEccCCCCcEEEEEcCCCEEEEEECCC------CceeeEecCCCCcEEEEE
Confidence 5666777665544443322221 11112211 233444444778899998774 223334432 11255667
Q ss_pred EEeCCeEEEEE-CCcEEEEEECCCCcEE
Q 047931 289 LWKNSTKLLVI-NRKNLLVCDCNNEGSE 315 (339)
Q Consensus 289 ~~~~~~i~~~~-~~~~~~~yd~~t~~~~ 315 (339)
+.++|.+++.. .++.+..||+++.+..
T Consensus 223 ~s~~~~~l~s~s~Dg~i~iwd~~~~~~~ 250 (340)
T 4aow_A 223 VSPDGSLCASGGKDGQAMLWDLNEGKHL 250 (340)
T ss_dssp ECTTSSEEEEEETTCEEEEEETTTTEEE
T ss_pred ECCCCCEEEEEeCCCeEEEEEeccCcee
Confidence 77788766654 4567999999887643
No 192
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=47.38 E-value=2e+02 Score=27.62 Aligned_cols=205 Identities=13% Similarity=0.118 Sum_probs=102.2
Q ss_pred EEeeeCceEEEccCCCEEEEEcccccceeecCCCCCCCCCCC-CCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCC
Q 047931 97 IVGSCNGLVCTTPKPKIFFVLNPLTRESKRIPDVPFEPFPRS-SDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRM 174 (339)
Q Consensus 97 ~~~s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~-~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~ 174 (339)
+....+|-+.+......++.+||.++++......+... ... ......+-. ..+. +.+. .. . .+.+|+..+
T Consensus 220 i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~-~~l~~~~i~~i~~d~~g~---lWig-t~--~-Gl~~~~~~~ 291 (795)
T 4a2l_A 220 ILQQSPTRIWVATEGAGLFLINPKTKEIKNYLHSPSNP-KSISSNYIRSLAMDSQNR---LWIG-TF--N-DLNIYHEGT 291 (795)
T ss_dssp EEEEETTEEEEEEBSSCEEEEETTTTEEEEECCCTTCT-TSCSCSBEEEEEECTTSC---EEEE-ES--S-CEEEEETTT
T ss_pred EEEcCCCCEEEEECCCCeEEEeCCCCeEEEeecCCCCc-cccCCCeEEEEEEcCCCC---EEEE-eC--C-hhheEcCCC
Confidence 33344566655443456888999888776664332110 000 001222211 1122 1222 11 2 577888888
Q ss_pred CceEEecccCC---ccCccCCCceEE--CCeEEEEEecCCCCeEEEEEECCCceeeeecCCC---CCCCCceeEEEEE-C
Q 047931 175 NSWRRVLASGY---TRPLINVPGTLT--NGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPD---ASTSFRFFGTGVL-G 245 (339)
Q Consensus 175 ~~W~~~~~~~~---~~~~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~---~~~~~~~~~l~~~-~ 245 (339)
+.++.....+. ......-.+++. +|. .|++... ..|..+|..+..|+.+.... ......-..+.+. +
T Consensus 292 ~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~---~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~ 367 (795)
T 4a2l_A 292 DSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYF---GGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKD 367 (795)
T ss_dssp TEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESS---SCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTT
T ss_pred CeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECC---CCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCC
Confidence 88887643221 111111112333 344 4666553 37899999998888774322 1111122334443 6
Q ss_pred CeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEec---C-CC---CeeEEEEEeCCe-EEEEECCcEEEEEECCCCcEEEe
Q 047931 246 DCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQ---D-PN---NVWPLCLWKNST-KLLVINRKNLLVCDCNNEGSEDV 317 (339)
Q Consensus 246 G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~---~-~~---~~~~~~~~~~~~-i~~~~~~~~~~~yd~~t~~~~~v 317 (339)
|.|.+.... ..+..|..+ ...+.....-. . .+ .+.-++...+|. +.+...+..++.||.++++++.+
T Consensus 368 g~lWiGt~~-~Gl~~~~~~----~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~ 442 (795)
T 4a2l_A 368 KNLWIGTND-GGLNLYNPI----TQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENF 442 (795)
T ss_dssp SCEEEEESS-SCEEEECTT----TCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEE
T ss_pred CCEEEEECC-CCeEEEcCC----CCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEe
Confidence 777764432 234333222 13344321100 0 11 144455555777 77766667899999999988776
Q ss_pred E
Q 047931 318 A 318 (339)
Q Consensus 318 ~ 318 (339)
.
T Consensus 443 ~ 443 (795)
T 4a2l_A 443 N 443 (795)
T ss_dssp C
T ss_pred e
Confidence 3
No 193
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=46.20 E-value=1.2e+02 Score=25.42 Aligned_cols=71 Identities=14% Similarity=0.014 Sum_probs=41.8
Q ss_pred ceEE--CCeEEEEEecC--CCCeEEEEEECCCce-eeeecCCCCCCC--CceeEEEEE--CCeEEEEEe---CCCeEEEE
Q 047931 194 GTLT--NGALHWRLQKH--GGDFVLAAFDLVEER-FKEFPLPDASTS--FRFFGTGVL--GDCLCLQFF---KGKMKEHW 261 (339)
Q Consensus 194 ~v~~--~G~lyw~~~~~--~~~~~il~fD~~~~~-~~~i~lP~~~~~--~~~~~l~~~--~G~L~~v~~---~~~~l~iW 261 (339)
++.+ +|.+|++.... .....|+.||+.+.+ .+.+.+|..... .....++.. +|.+++... ....+.+|
T Consensus 71 gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~ 150 (343)
T 2qe8_A 71 GIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRV 150 (343)
T ss_dssp EEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEE
T ss_pred EEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEE
Confidence 4555 48888876430 001379999999877 566777643211 111234444 567777765 45666666
Q ss_pred EEc
Q 047931 262 IMK 264 (339)
Q Consensus 262 ~l~ 264 (339)
.++
T Consensus 151 d~~ 153 (343)
T 2qe8_A 151 DLQ 153 (343)
T ss_dssp ETT
T ss_pred ECC
Confidence 654
No 194
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=46.10 E-value=1.3e+02 Score=25.28 Aligned_cols=96 Identities=9% Similarity=0.010 Sum_probs=55.8
Q ss_pred eEEEEEECCCcee-eeecCCCCC---------CCCceeEEEEE-CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEec-
Q 047931 212 FVLAAFDLVEERF-KEFPLPDAS---------TSFRFFGTGVL-GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQ- 279 (339)
Q Consensus 212 ~~il~fD~~~~~~-~~i~lP~~~---------~~~~~~~l~~~-~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~- 279 (339)
..|..+|+.+.+. ..+..|... .......+... +|++.+....+..+.||.++. ...+.++.
T Consensus 258 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~------~~~~~~~~~ 331 (397)
T 1sq9_A 258 GCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKT------KERITTLNM 331 (397)
T ss_dssp EEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTT------TEEEEEEEC
T ss_pred ceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCC------CceeEEEec
Confidence 4899999987653 444432110 01112233333 677776666888999998875 23344444
Q ss_pred -----C----------------CCCeeEEEEEeCC----------eEEEE-ECCcEEEEEECCCCc
Q 047931 280 -----D----------------PNNVWPLCLWKNS----------TKLLV-INRKNLLVCDCNNEG 313 (339)
Q Consensus 280 -----~----------------~~~~~~~~~~~~~----------~i~~~-~~~~~~~~yd~~t~~ 313 (339)
. .-.+.-+++.++| .+++. ..++.+.+||+++++
T Consensus 332 ~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 332 HCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp CGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred ccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 1 1125566777776 55554 446679999998764
No 195
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=45.73 E-value=1.2e+02 Score=24.65 Aligned_cols=176 Identities=10% Similarity=0.007 Sum_probs=84.4
Q ss_pred CCCEEEEEccccccee-ecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEEecccCCcc
Q 047931 110 KPKIFFVLNPLTRESK-RIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRVLASGYTR 187 (339)
Q Consensus 110 ~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~~ 187 (339)
.+..+.++|..+++.. .++..... ...+.+ ..+.+-+.+-. ...+.+|+.+++.-...-.....
T Consensus 127 ~d~~i~iwd~~~~~~~~~~~~~~~~--------v~~~~~~~~~~~l~~~~~-----d~~i~~wd~~~~~~~~~~~~~~~- 192 (312)
T 4ery_A 127 FDESVRIWDVKTGKCLKTLPAHSDP--------VSAVHFNRDGSLIVSSSY-----DGLCRIWDTASGQCLKTLIDDDN- 192 (312)
T ss_dssp TTSCEEEEETTTCCEEEEECCCSSC--------EEEEEECTTSSEEEEEET-----TSCEEEEETTTCCEEEEECCSSC-
T ss_pred CCCcEEEEECCCCEEEEEecCCCCc--------EEEEEEcCCCCEEEEEeC-----CCcEEEEECCCCceeeEEeccCC-
Confidence 3556777877766532 22221111 444555 33333332221 44678888877643221000000
Q ss_pred CccCCCceE--ECCeEEEEEecCCCCeEEEEEECCCceeee-ecCCCCCCCCceeEEEEECCeEEEEEeCCCeEEEEEEc
Q 047931 188 PLINVPGTL--TNGALHWRLQKHGGDFVLAAFDLVEERFKE-FPLPDASTSFRFFGTGVLGDCLCLQFFKGKMKEHWIMK 264 (339)
Q Consensus 188 ~~~~~~~v~--~~G~lyw~~~~~~~~~~il~fD~~~~~~~~-i~lP~~~~~~~~~~l~~~~G~L~~v~~~~~~l~iW~l~ 264 (339)
.....+. -+|.....+..+ ..|..+|+.+.+... +.................+|.+.+....+..+.+|.++
T Consensus 193 --~~~~~~~~~~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~ 267 (312)
T 4ery_A 193 --PPVSFVKFSPNGKYILAATLD---NTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 267 (312)
T ss_dssp --CCEEEEEECTTSSEEEEEETT---TEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETT
T ss_pred --CceEEEEECCCCCEEEEEcCC---CeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECC
Confidence 0000111 134433333332 478889998876433 33222211111112222356665555578899999987
Q ss_pred ccCCCCCeEEEEEecCC-CCeeEEEEEeCCeEEEEEC---CcEEEEEECC
Q 047931 265 EYGVKESWTRVFIHQDP-NNVWPLCLWKNSTKLLVIN---RKNLLVCDCN 310 (339)
Q Consensus 265 ~~~~~~~W~~~~~i~~~-~~~~~~~~~~~~~i~~~~~---~~~~~~yd~~ 310 (339)
.. ..+.++... -.+.-+++++++.++.... ++.+..|+.+
T Consensus 268 ~~------~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 268 TK------EIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp TC------CEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred Cc------hhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 52 123444332 1245566777777666542 4457777653
No 196
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=45.39 E-value=1.6e+02 Score=25.95 Aligned_cols=145 Identities=9% Similarity=0.027 Sum_probs=75.0
Q ss_pred EEee-eCceEEEccCCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCC--CcEEEEEEe
Q 047931 97 IVGS-CNGLVCTTPKPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKP--NMSVAIFSL 172 (339)
Q Consensus 97 ~~~s-~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~--~~~~~vyss 172 (339)
.++. .+|.|.+.+....+.++++.+++...+...... ..++.+ ..+.+-.+. . .... ...+.+++.
T Consensus 143 avdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~--------P~~ia~d~~G~~lyva-d-~~~~~~~~~v~~~~~ 212 (430)
T 3tc9_A 143 SFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSK--------VRTICWTHEADSMIIT-N-DQNNNDRPNNYILTR 212 (430)
T ss_dssp EEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSC--------EEEEEECTTSSEEEEE-E-CCSCTTSEEEEEEEG
T ss_pred EECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCC--------cceEEEeCCCCEEEEE-e-CCCCcccceEEEEeC
Confidence 3443 456665554337788888888776555332111 445555 333322222 2 1111 223344443
Q ss_pred CCCceE---EecccCCccCccCCCceEE---CCeEEEEEecCCCCeEEEEEECCCceee-eecCCCCCCCCceeEEEEE-
Q 047931 173 RMNSWR---RVLASGYTRPLINVPGTLT---NGALHWRLQKHGGDFVLAAFDLVEERFK-EFPLPDASTSFRFFGTGVL- 244 (339)
Q Consensus 173 ~~~~W~---~~~~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~il~fD~~~~~~~-~i~lP~~~~~~~~~~l~~~- 244 (339)
.+.|. .+.... ...++.+ +|.+|+..... ..|..||+.+.... ....+... ....++..
T Consensus 213 -~g~~~~~~~l~~~~------~p~giavdp~~g~lyv~d~~~---~~V~~~~~~~~~~~~~~~~~~~~---~P~gia~~p 279 (430)
T 3tc9_A 213 -ESGFKVITELTKGQ------NCNGAETHPINGELYFNSWNA---GQVFRYDFTTQETTPLFTIQDSG---WEFHIQFHP 279 (430)
T ss_dssp -GGTSCSEEEEEECS------SCCCEEECTTTCCEEEEETTT---TEEEEEETTTTEEEEEEECSSSS---CCEEEEECT
T ss_pred -CCceeeeeeeccCC------CceEEEEeCCCCEEEEEECCC---CEEEEEECCCCcEEEEEEcCCCC---cceeEEEcC
Confidence 34443 232211 1223444 68898876553 48999999887663 33444321 22244444
Q ss_pred CCe-EEEEEeCCCeEEEEEEc
Q 047931 245 GDC-LCLQFFKGKMKEHWIMK 264 (339)
Q Consensus 245 ~G~-L~~v~~~~~~l~iW~l~ 264 (339)
+|+ |+++......+.++..+
T Consensus 280 dG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 280 SGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp TSSEEEEEETTTTEEEEEEEE
T ss_pred CCCEEEEEECCCCEEEEEeCC
Confidence 666 88777766766665554
No 197
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=45.04 E-value=1.5e+02 Score=25.66 Aligned_cols=196 Identities=11% Similarity=0.089 Sum_probs=92.7
Q ss_pred eEEEccCCCEEEEEcccccce--eec-CCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCc-eE
Q 047931 104 LVCTTPKPKIFFVLNPLTRES--KRI-PDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNS-WR 178 (339)
Q Consensus 104 Ll~~~~~~~~~~V~NP~T~~~--~~L-P~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~-W~ 178 (339)
+++....++.+.|++.-++.. ..+ +..... ........+.+ ..+...++... ..-.+.+|+.+++. .+
T Consensus 196 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~---~h~~~v~~v~~~p~~~~~l~s~~----~dg~i~i~d~~~~~~~~ 268 (430)
T 2xyi_A 196 YLLSASDDHTICLWDINATPKEHRVIDAKNIFT---GHTAVVEDVAWHLLHESLFGSVA----DDQKLMIWDTRNNNTSK 268 (430)
T ss_dssp EEEEECTTSCEEEEETTSCCBGGGEEECSEEEC---CCSSCEEEEEECSSCTTEEEEEE----TTSEEEEEETTCSCSSS
T ss_pred eEEEEeCCCeEEEEeCCCCCCCCceeccceeec---CCCCCEeeeEEeCCCCCEEEEEe----CCCeEEEEECCCCCCCc
Confidence 555444567788888876321 111 111110 00011444555 22333333322 25678899988652 11
Q ss_pred EecccCCccCccCCCceEEC--Ce-EEEEEecCCCCeEEEEEECCCce--eeeecCCCCCCCCceeEEEEE-CC-eEEEE
Q 047931 179 RVLASGYTRPLINVPGTLTN--GA-LHWRLQKHGGDFVLAAFDLVEER--FKEFPLPDASTSFRFFGTGVL-GD-CLCLQ 251 (339)
Q Consensus 179 ~~~~~~~~~~~~~~~~v~~~--G~-lyw~~~~~~~~~~il~fD~~~~~--~~~i~lP~~~~~~~~~~l~~~-~G-~L~~v 251 (339)
.+..+... ......+.++ |. ++..+... ..|..+|+.+.. ...+..... ....+... +| .+++.
T Consensus 269 ~~~~~~~~--~~~v~~i~~~p~~~~~l~tg~~d---g~v~vwd~~~~~~~~~~~~~h~~----~v~~i~~sp~~~~~l~s 339 (430)
T 2xyi_A 269 PSHTVDAH--TAEVNCLSFNPYSEFILATGSAD---KTVALWDLRNLKLKLHSFESHKD----EIFQVQWSPHNETILAS 339 (430)
T ss_dssp CSEEEECC--SSCEEEEEECSSCTTEEEEEETT---SEEEEEETTCTTSCSEEEECCSS----CEEEEEECSSCTTEEEE
T ss_pred ceeEeecC--CCCeEEEEeCCCCCCEEEEEeCC---CeEEEEeCCCCCCCeEEeecCCC----CEEEEEECCCCCCEEEE
Confidence 11111000 0011123332 33 44444443 478999988632 222221111 12233333 45 46666
Q ss_pred EeCCCeEEEEEEcccCCCC--------CeEEEEEecCC-CCeeEEEEEeCCe-EEEEE-CCcEEEEEECCCCcEE
Q 047931 252 FFKGKMKEHWIMKEYGVKE--------SWTRVFIHQDP-NNVWPLCLWKNST-KLLVI-NRKNLLVCDCNNEGSE 315 (339)
Q Consensus 252 ~~~~~~l~iW~l~~~~~~~--------~W~~~~~i~~~-~~~~~~~~~~~~~-i~~~~-~~~~~~~yd~~t~~~~ 315 (339)
...+..+.||.+...+... .-.++...... -.+.-+++.+++. +++.. .++.+.+|++.++.+.
T Consensus 340 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~~~ 414 (430)
T 2xyi_A 340 SGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYN 414 (430)
T ss_dssp EETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHHHHC
T ss_pred EeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccccccc
Confidence 6678899999998633110 01222333221 1255667777776 55544 4567899998766544
No 198
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=43.00 E-value=1.6e+02 Score=25.20 Aligned_cols=194 Identities=13% Similarity=0.077 Sum_probs=95.4
Q ss_pred Cce-EEEccCCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEE
Q 047931 102 NGL-VCTTPKPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRR 179 (339)
Q Consensus 102 ~GL-l~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~ 179 (339)
+|- +.....+..+.|+|..+++....-..+.. ....+.+ ..+.+-+.+- ....+.+++.+++.-..
T Consensus 134 dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~-------~v~~~~~~p~~~~l~s~s-----~d~~v~iwd~~~~~~~~ 201 (393)
T 1erj_A 134 DGKFLATGAEDRLIRIWDIENRKIVMILQGHEQ-------DIYSLDYFPSGDKLVSGS-----GDRTVRIWDLRTGQCSL 201 (393)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECCCSS-------CEEEEEECTTSSEEEEEE-----TTSEEEEEETTTTEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEEEEccCCC-------CEEEEEEcCCCCEEEEec-----CCCcEEEEECCCCeeEE
Confidence 453 33334567899999888765433221111 1455666 3344333222 24578888888765433
Q ss_pred ecccCCccCccCCCceEE---CCeEEEEEecCCCCeEEEEEECCCceee-eecCCCCC---CCCceeEEEEE-CCeEEEE
Q 047931 180 VLASGYTRPLINVPGTLT---NGALHWRLQKHGGDFVLAAFDLVEERFK-EFPLPDAS---TSFRFFGTGVL-GDCLCLQ 251 (339)
Q Consensus 180 ~~~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~il~fD~~~~~~~-~i~lP~~~---~~~~~~~l~~~-~G~L~~v 251 (339)
.-..... ...+.+ +|.+...+..+ ..|..+|+.+.+.. .+..+... ....-..+... +|++.+.
T Consensus 202 ~~~~~~~-----v~~~~~~~~~~~~l~~~s~d---~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s 273 (393)
T 1erj_A 202 TLSIEDG-----VTTVAVSPGDGKYIAAGSLD---RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVS 273 (393)
T ss_dssp EEECSSC-----EEEEEECSTTCCEEEEEETT---SCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEE
T ss_pred EEEcCCC-----cEEEEEECCCCCEEEEEcCC---CcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEE
Confidence 2111111 011111 45544444433 46888898876533 23222111 11112233333 7777766
Q ss_pred EeCCCeEEEEEEcccCCCC------CeEEEEEecC-CCCeeEEEEEeCCeEEEEE-CCcEEEEEECCCCcEE
Q 047931 252 FFKGKMKEHWIMKEYGVKE------SWTRVFIHQD-PNNVWPLCLWKNSTKLLVI-NRKNLLVCDCNNEGSE 315 (339)
Q Consensus 252 ~~~~~~l~iW~l~~~~~~~------~W~~~~~i~~-~~~~~~~~~~~~~~i~~~~-~~~~~~~yd~~t~~~~ 315 (339)
...+..+.+|.++...... ......++.. .-.+.-+++..++..++.. .++.+..||.++++..
T Consensus 274 ~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~ 345 (393)
T 1erj_A 274 GSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPL 345 (393)
T ss_dssp EETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEE
T ss_pred EeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEE
Confidence 6688999999987532100 0111122211 1114456666677655544 4567999999988743
No 199
>2lyd_A Decapping protein 1; DCP1, XRN1, transcription-protein binding complex; NMR {Drosophila melanogaster}
Probab=42.32 E-value=53 Score=23.98 Aligned_cols=28 Identities=7% Similarity=0.020 Sum_probs=22.5
Q ss_pred eEEEEECCcEEEEEECCCCcEEEeEEeC
Q 047931 294 TKLLVINRKNLLVCDCNNEGSEDVAVAD 321 (339)
Q Consensus 294 ~i~~~~~~~~~~~yd~~t~~~~~v~~~~ 321 (339)
+|+.....-.++.||.++++|++.++.|
T Consensus 30 ~Il~~a~~v~vY~f~~~~~~W~K~~iEG 57 (134)
T 2lyd_A 30 EIVDSSSHVAFYTFNSSQNEWEKTDVEG 57 (134)
T ss_dssp EEEEEEEEEEEEEEETTTTEEEEEEEEE
T ss_pred HHHhhCCeEEEEEecCCcCceeEcCCcc
Confidence 4666665556888999999999999987
No 200
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=41.76 E-value=2.3e+02 Score=26.80 Aligned_cols=30 Identities=13% Similarity=0.068 Sum_probs=22.4
Q ss_pred CceEECCeEEEEEecCCCCeEEEEEECCCce--eee
Q 047931 193 PGTLTNGALHWRLQKHGGDFVLAAFDLVEER--FKE 226 (339)
Q Consensus 193 ~~v~~~G~lyw~~~~~~~~~~il~fD~~~~~--~~~ 226 (339)
..++.+|.+|.-...+ .+.++|.+|.+ |+.
T Consensus 116 ~~~~~~g~v~v~~~dg----~l~AlDa~TG~~~W~~ 147 (689)
T 1yiq_A 116 GVAVWKGKVYVGVLDG----RLEAIDAKTGQRAWSV 147 (689)
T ss_dssp CCEEETTEEEEECTTS----EEEEEETTTCCEEEEE
T ss_pred ccEEECCEEEEEccCC----EEEEEECCCCCEeeee
Confidence 4567899999876554 89999998754 554
No 201
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=41.32 E-value=1.5e+02 Score=24.48 Aligned_cols=101 Identities=9% Similarity=-0.087 Sum_probs=55.1
Q ss_pred eEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCe-EEEEEeCCCeEEEEEEcccCCCCCeEEEEEecCCCCeeEEEE
Q 047931 212 FVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDC-LCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQDPNNVWPLCL 289 (339)
Q Consensus 212 ~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~-L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~ 289 (339)
..+..+|..+.+...+.- ... ..-.++.. +|+ |++.......+.++.++... .........++ +-.-+++
T Consensus 165 g~v~~~d~~~~~~~~~~~--~~~--~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~-~~~~~~~~~~~---gP~gi~~ 236 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLK--ELH--VPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPK-KGTAEVLVKIP---NPGNIKR 236 (322)
T ss_dssp EEEEEEETTTTEEEEEEE--EES--CCCEEEECTTSSEEEEEEGGGTEEEEEESSSTT-TTCEEEEEECS---SEEEEEE
T ss_pred ceEEEEeCCCCEEEEecc--CCc--cCcceEECCCCCEEEEEeCCCCeEEEEECCCCc-CCccceEEeCC---CCCCeEE
Confidence 579999998877654410 000 01123333 554 77766665666655554311 12343333221 2222345
Q ss_pred EeCCeEEEEECC-----------cEEEEEECCCCcEEEeEEe
Q 047931 290 WKNSTKLLVINR-----------KNLLVCDCNNEGSEDVAVA 320 (339)
Q Consensus 290 ~~~~~i~~~~~~-----------~~~~~yd~~t~~~~~v~~~ 320 (339)
..+|.+++.... ..+..||++.+..+.+...
T Consensus 237 d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~ 278 (322)
T 2fp8_A 237 NADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLP 278 (322)
T ss_dssp CTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECC
T ss_pred CCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECC
Confidence 556777776533 3599999987777777654
No 202
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=41.04 E-value=79 Score=27.47 Aligned_cols=112 Identities=8% Similarity=-0.002 Sum_probs=57.1
Q ss_pred CCeEEEEEecCCCCeEEEEEECCCceeee---ecCCCCC--CCCcee----EEEEE--CCeEEEEEe-C-C------CeE
Q 047931 198 NGALHWRLQKHGGDFVLAAFDLVEERFKE---FPLPDAS--TSFRFF----GTGVL--GDCLCLQFF-K-G------KMK 258 (339)
Q Consensus 198 ~G~lyw~~~~~~~~~~il~fD~~~~~~~~---i~lP~~~--~~~~~~----~l~~~--~G~L~~v~~-~-~------~~l 258 (339)
+|.+||... + .+.++|+.+.+-.. +++.... ...... .++.. +++||+... . . ...
T Consensus 222 ~~~~~~vs~-~----~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~ 296 (368)
T 1mda_H 222 PGMLVWAVA-S----SILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENT 296 (368)
T ss_dssp TTEEEECBS-S----CCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEE
T ss_pred CCEEEEEcC-C----EEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCE
Confidence 456777766 5 68889987643332 2332110 000000 12222 456776544 2 2 233
Q ss_pred EEEEEcccCCCCCeEEEEEecCCCCeeEEEEEeCCe-EEEEEC--CcEEEEEECCCCcEE-EeEEe
Q 047931 259 EHWIMKEYGVKESWTRVFIHQDPNNVWPLCLWKNST-KLLVIN--RKNLLVCDCNNEGSE-DVAVA 320 (339)
Q Consensus 259 ~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~-i~~~~~--~~~~~~yd~~t~~~~-~v~~~ 320 (339)
.++.++ +...+.+|+..-...-+++..+|+ +++... +..+.++|.+|.+.. .+...
T Consensus 297 ~ViD~~------t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg 356 (368)
T 1mda_H 297 SSVTAS------VGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELD 356 (368)
T ss_dssp EEEESS------SCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCC
T ss_pred EEEECC------CCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECC
Confidence 333333 244455554311133455666775 666554 567999999998844 45433
No 203
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=40.15 E-value=1.5e+02 Score=24.08 Aligned_cols=64 Identities=13% Similarity=0.199 Sum_probs=42.2
Q ss_pred CeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecC-CCCeeEEEEEeC--CeEEE-EECCcEEEEEECCCCc
Q 047931 246 DCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQD-PNNVWPLCLWKN--STKLL-VINRKNLLVCDCNNEG 313 (339)
Q Consensus 246 G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~-~~~~~~~~~~~~--~~i~~-~~~~~~~~~yd~~t~~ 313 (339)
|.+.+....+..+.||.++. .+|....++.. .-.+.-+++.++ |.+++ ...++.+..||++++.
T Consensus 67 g~~l~s~s~D~~v~iWd~~~----~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~ 134 (297)
T 2pm7_B 67 GTILASCSYDGKVMIWKEEN----GRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENG 134 (297)
T ss_dssp CSEEEEEETTTEEEEEEBSS----SCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSS
T ss_pred CCEEEEEcCCCEEEEEEcCC----CceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCC
Confidence 77777677889999999874 34655555543 222556666664 55555 4456679999998763
No 204
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=39.90 E-value=1.6e+02 Score=24.32 Aligned_cols=135 Identities=10% Similarity=-0.079 Sum_probs=74.7
Q ss_pred EEEEEeCCCceEEecccCCccCccCCCceEECCeEEEEEecCCCCeEEEEEECCCce-eeeecCCCCCCCCceeEEEEEC
Q 047931 167 VAIFSLRMNSWRRVLASGYTRPLINVPGTLTNGALHWRLQKHGGDFVLAAFDLVEER-FKEFPLPDASTSFRFFGTGVLG 245 (339)
Q Consensus 167 ~~vyss~~~~W~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~~~-~~~i~lP~~~~~~~~~~l~~~~ 245 (339)
+.+++.+++.=.... ++.. .........++.+|-+.... ..+.+||.++.+ ...++.+... ..|+.-+
T Consensus 77 v~~iD~~Tgkv~~~~-l~~~--~FgeGit~~g~~Ly~ltw~~---~~v~V~D~~Tl~~~~ti~~~~eG-----wGLt~Dg 145 (268)
T 3nok_A 77 LRQLSLESAQPVWME-RLGN--IFAEGLASDGERLYQLTWTE---GLLFTWSGMPPQRERTTRYSGEG-----WGLCYWN 145 (268)
T ss_dssp EEECCSSCSSCSEEE-ECTT--CCEEEEEECSSCEEEEESSS---CEEEEEETTTTEEEEEEECSSCC-----CCEEEET
T ss_pred EEEEECCCCcEEeEE-CCCC--cceeEEEEeCCEEEEEEccC---CEEEEEECCcCcEEEEEeCCCce-----eEEecCC
Confidence 667777765321111 2221 11111234567887776554 589999999855 4566765432 2345557
Q ss_pred CeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecCC-----CC-eeEEEEEeCCeEEEEEC-CcEEEEEECCCCcE-EEe
Q 047931 246 DCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQDP-----NN-VWPLCLWKNSTKLLVIN-RKNLLVCDCNNEGS-EDV 317 (339)
Q Consensus 246 G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~-----~~-~~~~~~~~~~~i~~~~~-~~~~~~yd~~t~~~-~~v 317 (339)
++|++... .. .|+.++- ++=..+.+|... +. ..-+.. .+|+++.... ...+.+.|++|++. +++
T Consensus 146 ~~L~vSdG-s~--~l~~iDp----~T~~v~~~I~V~~~g~~v~~lNeLe~-~dG~lyanvw~s~~I~vIDp~TG~V~~~I 217 (268)
T 3nok_A 146 GKLVRSDG-GT--MLTFHEP----DGFALVGAVQVKLRGQPVELINELEC-ANGVIYANIWHSSDVLEIDPATGTVVGVI 217 (268)
T ss_dssp TEEEEECS-SS--EEEEECT----TTCCEEEEEECEETTEECCCEEEEEE-ETTEEEEEETTCSEEEEECTTTCBEEEEE
T ss_pred CEEEEECC-CC--EEEEEcC----CCCeEEEEEEeCCCCcccccccccEE-eCCEEEEEECCCCeEEEEeCCCCcEEEEE
Confidence 77777653 33 4666663 122334455431 11 111222 3778776553 45799999999985 466
Q ss_pred EEe
Q 047931 318 AVA 320 (339)
Q Consensus 318 ~~~ 320 (339)
.+.
T Consensus 218 dl~ 220 (268)
T 3nok_A 218 DAS 220 (268)
T ss_dssp ECH
T ss_pred ECC
Confidence 654
No 205
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.37 E-value=27 Score=22.41 Aligned_cols=21 Identities=5% Similarity=-0.015 Sum_probs=16.3
Q ss_pred EEEEECCcEEEEEECCCCcEE
Q 047931 295 KLLVINRKNLLVCDCNNEGSE 315 (339)
Q Consensus 295 i~~~~~~~~~~~yd~~t~~~~ 315 (339)
......++++|+||..|++-.
T Consensus 23 ~~v~T~dGR~fyyN~~Tk~S~ 43 (73)
T 2dk7_A 23 CVVWTGDERVFFYNPTTRLSM 43 (73)
T ss_dssp EEEEESSSCEEEEETTTTEEC
T ss_pred EEEECCCCCEEEecCccccee
Confidence 444567788999999999844
No 206
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=38.56 E-value=2.6e+02 Score=26.37 Aligned_cols=30 Identities=13% Similarity=0.037 Sum_probs=22.1
Q ss_pred CceEECCeEEEEEecCCCCeEEEEEECCCce--eee
Q 047931 193 PGTLTNGALHWRLQKHGGDFVLAAFDLVEER--FKE 226 (339)
Q Consensus 193 ~~v~~~G~lyw~~~~~~~~~~il~fD~~~~~--~~~ 226 (339)
..++.+|.+|.-...+ .+.++|.+|.+ |+.
T Consensus 112 ~~~~~~~~v~v~~~dg----~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 112 GVALWGDKVYVGTLDG----RLIALDAKTGKAIWSQ 143 (668)
T ss_dssp CCEEEBTEEEEECTTS----EEEEEETTTCCEEEEE
T ss_pred ceEEECCEEEEEcCCC----EEEEEECCCCCEeeee
Confidence 3567889998876554 89999987654 554
No 207
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=38.28 E-value=1.7e+02 Score=24.12 Aligned_cols=64 Identities=6% Similarity=-0.014 Sum_probs=40.4
Q ss_pred CeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecCC---CCeeEEEEEeCCeEEEEE-CCcEEEEEECCC
Q 047931 246 DCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQDP---NNVWPLCLWKNSTKLLVI-NRKNLLVCDCNN 311 (339)
Q Consensus 246 G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~---~~~~~~~~~~~~~i~~~~-~~~~~~~yd~~t 311 (339)
|++.++...+..+.||.++... ..-.....+... -.+.-+++.++++.++.. .++.+..||+.+
T Consensus 299 ~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 299 QKMLALGNQVGKLYVWDLEVED--PHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp SSEEEEECTTSCEEEEECCSSS--GGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CcEEEEEecCCcEEEEECCCCC--CccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 7777777788899999998632 112233444332 225667777788766654 456799999864
No 208
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=38.25 E-value=63 Score=27.81 Aligned_cols=57 Identities=4% Similarity=0.016 Sum_probs=33.7
Q ss_pred CcEEEEEEeCCCceEEecccCCcc----CccCCCceE-------ECCeEEEEEecCCCCeEEEEEECCCcee
Q 047931 164 NMSVAIFSLRMNSWRRVLASGYTR----PLINVPGTL-------TNGALHWRLQKHGGDFVLAAFDLVEERF 224 (339)
Q Consensus 164 ~~~~~vyss~~~~W~~~~~~~~~~----~~~~~~~v~-------~~G~lyw~~~~~~~~~~il~fD~~~~~~ 224 (339)
.-.+..|+.+++.|+-...++... ......+|. .+|.+|.-...+ .+.++|+.+++.
T Consensus 66 dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g----~l~ald~~tG~~ 133 (339)
T 2be1_A 66 DGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRT----IMYTINMLNGEI 133 (339)
T ss_dssp TTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEE----EEEEEETTTCCE
T ss_pred CCEEEEEECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCC----EEEEEECCCCcE
Confidence 445666777777665322222111 011233455 799999988886 999999998753
No 209
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=38.08 E-value=77 Score=27.23 Aligned_cols=26 Identities=8% Similarity=-0.093 Sum_probs=20.0
Q ss_pred CCeEEEEECCcEEEEEECCCCcEEEe
Q 047931 292 NSTKLLVINRKNLLVCDCNNEGSEDV 317 (339)
Q Consensus 292 ~~~i~~~~~~~~~~~yd~~t~~~~~v 317 (339)
+|.++....+.+++..|.+|++..+.
T Consensus 111 ~g~Vy~Gs~~g~l~ald~~tG~~~W~ 136 (339)
T 2be1_A 111 DEKVYTGSMRTIMYTINMLNGEIISA 136 (339)
T ss_dssp CEEEEECEEEEEEEEEETTTCCEEEE
T ss_pred CCEEEEEecCCEEEEEECCCCcEEEE
Confidence 44566666677899999999997765
No 210
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=37.57 E-value=3e+02 Score=26.77 Aligned_cols=156 Identities=7% Similarity=-0.039 Sum_probs=80.0
Q ss_pred CcEEEEEEeCCCceEEecccCCccCccCCCceEE---CCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeE
Q 047931 164 NMSVAIFSLRMNSWRRVLASGYTRPLINVPGTLT---NGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFG 240 (339)
Q Consensus 164 ~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~ 240 (339)
...+++++.....-+.+..-.. ....++.+ +|.|||..... ...|..+|+....-+.+- ..... ....
T Consensus 492 ~~~I~v~~ldG~~~~~l~~~~l----~~P~gIaVDp~~g~LYwtD~g~--~~~I~~~~~dG~~~~~lv-~~~l~--~P~G 562 (791)
T 3m0c_C 492 LGTVSVADTKGVKRKTLFRENG----SKPRAIVVDPVHGFMYWTDWGT--PAKIKKGGLNGVDIYSLV-TENIQ--WPNG 562 (791)
T ss_dssp TTEEEEEETTSSSEEEEEECTT----CCEEEEEEETTTTEEEEEECSS--SCEEEEEETTSCCEEEEE-CSSCS--CEEE
T ss_pred CCeEEEEeCCCCeEEEEEeCCC----CCcceEEEecCCCCEEEecCCC--CCeEEEEecCCCceEEEE-eCCCC--CceE
Confidence 4577788776555444421111 11224544 58999986432 247888998765544442 11211 2234
Q ss_pred EEEE--CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecCCCCeeEEEEEeCC-eEEEEEC-CcEEEEEECCCCcEEE
Q 047931 241 TGVL--GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQDPNNVWPLCLWKNS-TKLLVIN-RKNLLVCDCNNEGSED 316 (339)
Q Consensus 241 l~~~--~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~-~i~~~~~-~~~~~~yd~~t~~~~~ 316 (339)
|+.. +|+||++...... ||..+-.| ........ -...+ ..|+++...+ .|++.-. ...+...|..+++-..
T Consensus 563 LavD~~~~~LYwaD~~~~~--I~~~d~dG-~~~~~v~~-~~~~l-~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~~~~ 637 (791)
T 3m0c_C 563 ITLDLLSGRLYWVDSKLHS--ISSIDVNG-GNRKTILE-DEKRL-AHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVN 637 (791)
T ss_dssp EEEETTTTEEEEEETTTTE--EEEEETTS-CSCEEEEE-CTTTT-SSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCE
T ss_pred EEEecCCCeEEEEeCCCCc--EEEEecCC-CceEEEec-CCCcc-CCCCEEEEeCCEEEEEECCCCEEEEEeCCCCcceE
Confidence 4444 8999998775554 45555333 23232221 11123 4577766534 4555432 3469999977765333
Q ss_pred eEEeCCCCccceeEEec
Q 047931 317 VAVADVPNWNSACVYVE 333 (339)
Q Consensus 317 v~~~~~~~~~~~~~y~~ 333 (339)
+-..+...-+.+.+|.+
T Consensus 638 ~l~~~l~~P~~i~v~h~ 654 (791)
T 3m0c_C 638 LLAENLLSPEDMVLFHN 654 (791)
T ss_dssp EEECSCSCCCCEEEESG
T ss_pred EeecCCCCceeEeeecc
Confidence 32333322233444444
No 211
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=37.02 E-value=2.6e+02 Score=26.05 Aligned_cols=108 Identities=6% Similarity=-0.089 Sum_probs=50.8
Q ss_pred CCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeC-----CCcEEEEEEeCCCceEEecccC
Q 047931 111 PKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLK-----PNMSVAIFSLRMNSWRRVLASG 184 (339)
Q Consensus 111 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~-----~~~~~~vyss~~~~W~~~~~~~ 184 (339)
+..+.++|+.|++...+-..... .......+.+ ..+.+-+.... ... ....+.+++..++.-+.+....
T Consensus 36 dg~i~~~d~~~g~~~~~~~~~~~----~~~~v~~~~~SpDg~~l~~~~~-~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~ 110 (723)
T 1xfd_A 36 KGTVRLWNVETNTSTVLIEGKKI----ESLRAIRYEISPDREYALFSYN-VEPIYQHSYTGYYVLSKIPHGDPQSLDPPE 110 (723)
T ss_dssp SSCEEEBCGGGCCCEEEECTTTT----TTTTCSEEEECTTSSEEEEEES-CCCCSSSCCCSEEEEEESSSCCCEECCCTT
T ss_pred CCCEEEEECCCCcEEEEeccccc----cccccceEEECCCCCEEEEEec-CccceeecceeeEEEEECCCCceEeccCCc
Confidence 45788999999886555432211 0001223444 34444444322 111 1367889998887666554322
Q ss_pred CccCccCCCceEECCeEEEEEecCCCCeEEEEEECCCceeeee
Q 047931 185 YTRPLINVPGTLTNGALHWRLQKHGGDFVLAAFDLVEERFKEF 227 (339)
Q Consensus 185 ~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~~~~~~i 227 (339)
............=+|..-.....+ .|...|+.+.+...+
T Consensus 111 ~~~~~~~~~~~SPdG~~la~~~~~----~i~~~~~~~g~~~~~ 149 (723)
T 1xfd_A 111 VSNAKLQYAGWGPKGQQLIFIFEN----NIYYCAHVGKQAIRV 149 (723)
T ss_dssp CCSCCCSBCCBCSSTTCEEEEETT----EEEEESSSSSCCEEE
T ss_pred cccccccccEECCCCCEEEEEECC----eEEEEECCCCceEEE
Confidence 110000111122345322222223 577777776654443
No 212
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=36.82 E-value=1.6e+02 Score=23.45 Aligned_cols=109 Identities=8% Similarity=-0.079 Sum_probs=0.0
Q ss_pred CCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE--CCeEEEEEeCCCeEEEEEEcccCCCCCeEEE
Q 047931 198 NGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL--GDCLCLQFFKGKMKEHWIMKEYGVKESWTRV 275 (339)
Q Consensus 198 ~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~--~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~ 275 (339)
+|.+||..... ..|..+|+.+.....+.-.... ....++.. +|.||+.......+.+..++. ..-...
T Consensus 47 ~~~ly~~d~~~---~~I~~~~~~g~~~~~~~~~~~~---~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g----~~~~~~ 116 (267)
T 1npe_A 47 DKVVYWTDISE---PSIGRASLHGGEPTTIIRQDLG---SPEGIALDHLGRTIFWTDSQLDRIEVAKMDG----TQRRVL 116 (267)
T ss_dssp TTEEEEEETTT---TEEEEEESSSCCCEEEECTTCC---CEEEEEEETTTTEEEEEETTTTEEEEEETTS----CSCEEE
T ss_pred CCEEEEEECCC---CEEEEEecCCCCcEEEEECCCC---CccEEEEEecCCeEEEEECCCCEEEEEEcCC----CCEEEE
Q ss_pred EEecCCCCeeEEEEEe-CCeEEEEECC---cEEEEEECCCCcEEEe
Q 047931 276 FIHQDPNNVWPLCLWK-NSTKLLVINR---KNLLVCDCNNEGSEDV 317 (339)
Q Consensus 276 ~~i~~~~~~~~~~~~~-~~~i~~~~~~---~~~~~yd~~t~~~~~v 317 (339)
....... -.-+++.+ +|.+++.... .++..++++....+.+
T Consensus 117 ~~~~~~~-P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~ 161 (267)
T 1npe_A 117 FDTGLVN-PRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRIL 161 (267)
T ss_dssp ECSSCSS-EEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEE
T ss_pred EECCCCC-ccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEE
No 213
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=36.67 E-value=1.7e+02 Score=25.19 Aligned_cols=65 Identities=12% Similarity=0.093 Sum_probs=42.8
Q ss_pred CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecC---CCCeeEEEEEeCCeEEEEE-CCcEEEEEECCCCcEE
Q 047931 245 GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQD---PNNVWPLCLWKNSTKLLVI-NRKNLLVCDCNNEGSE 315 (339)
Q Consensus 245 ~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~---~~~~~~~~~~~~~~i~~~~-~~~~~~~yd~~t~~~~ 315 (339)
+|.+.++...+..+.+|.++.. ..+.++.. .-.+.-+++.+++..++.. .++.+..||+++++..
T Consensus 181 ~~~~l~~~~~d~~i~iwd~~~~------~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 249 (437)
T 3gre_A 181 EKSLLVALTNLSRVIIFDIRTL------ERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLI 249 (437)
T ss_dssp SCEEEEEEETTSEEEEEETTTC------CEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEE
T ss_pred CCCEEEEEeCCCeEEEEeCCCC------eeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEE
Confidence 5777776778889999998752 12233322 1125667777777766654 4556999999987754
No 214
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=36.20 E-value=1.7e+02 Score=23.71 Aligned_cols=142 Identities=10% Similarity=0.056 Sum_probs=75.9
Q ss_pred CcEEEEEEeCCC--ceEEecccCCccCccCCCceEECCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEE
Q 047931 164 NMSVAIFSLRMN--SWRRVLASGYTRPLINVPGTLTNGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGT 241 (339)
Q Consensus 164 ~~~~~vyss~~~--~W~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l 241 (339)
...+.+++.+++ .|+.-..-... .....+.-+|.++. +... .|.+||...+....+..|... .....
T Consensus 14 ~~~v~~~d~~tG~~~w~~~~~~~~~---~~~~~~~pdG~ilv-s~~~----~V~~~d~~G~~~W~~~~~~~~---~~~~~ 82 (276)
T 3no2_A 14 WNKIAIINKDTKEIVWEYPLEKGWE---CNSVAATKAGEILF-SYSK----GAKMITRDGRELWNIAAPAGC---EMQTA 82 (276)
T ss_dssp CSEEEEEETTTTEEEEEEECCTTCC---CCEEEECTTSCEEE-ECBS----EEEEECTTSCEEEEEECCTTC---EEEEE
T ss_pred CCEEEEEECCCCeEEEEeCCCccCC---CcCeEECCCCCEEE-eCCC----CEEEECCCCCEEEEEcCCCCc---ccccc
Confidence 567778887665 67765321000 01112334787776 4443 799999965555556655322 11122
Q ss_pred EEE-CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecCCC-----CeeEEEEEeCCeEEEEEC-CcEEEEEECCCCcE
Q 047931 242 GVL-GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQDPN-----NVWPLCLWKNSTKLLVIN-RKNLLVCDCNNEGS 314 (339)
Q Consensus 242 ~~~-~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~-----~~~~~~~~~~~~i~~~~~-~~~~~~yd~~t~~~ 314 (339)
... +|++.++.... .-.|+.++..| +..|.. .+.... ...-+....+|++++... +.+++.||++.+.+
T Consensus 83 ~~~~dG~~lv~~~~~-~~~v~~vd~~G-k~l~~~--~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G~~~ 158 (276)
T 3no2_A 83 RILPDGNALVAWCGH-PSTILEVNMKG-EVLSKT--EFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQLL 158 (276)
T ss_dssp EECTTSCEEEEEEST-TEEEEEECTTS-CEEEEE--EECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTTSCEE
T ss_pred EECCCCCEEEEecCC-CCEEEEEeCCC-CEEEEE--eccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCCCCEE
Confidence 333 78877766541 23456666432 233443 322110 112234556777777553 56799999995555
Q ss_pred EEeEEe
Q 047931 315 EDVAVA 320 (339)
Q Consensus 315 ~~v~~~ 320 (339)
.++...
T Consensus 159 w~~~~~ 164 (276)
T 3no2_A 159 NSVKLS 164 (276)
T ss_dssp EEEECS
T ss_pred EEEECC
Confidence 555443
No 215
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=35.67 E-value=1.9e+02 Score=24.13 Aligned_cols=137 Identities=8% Similarity=-0.030 Sum_probs=70.8
Q ss_pred CcEEEEEEeCCCceEEecccCCccCccCCCceEE---CCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeE
Q 047931 164 NMSVAIFSLRMNSWRRVLASGYTRPLINVPGTLT---NGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFG 240 (339)
Q Consensus 164 ~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~ 240 (339)
...+++++.....=+.+..-.. ....++.+ +|.+||..... ...|..+|+....-+.+- ..... ..-.
T Consensus 100 ~~~I~~~~~dG~~~~~l~~~~~----~~P~giavdp~~g~ly~td~~~--~~~I~r~~~dG~~~~~~~-~~~l~--~Png 170 (318)
T 3sov_A 100 TNRIEVSNLDGSLRKVLFWQEL----DQPRAIALDPSSGFMYWTDWGE--VPKIERAGMDGSSRFIII-NSEIY--WPNG 170 (318)
T ss_dssp TTEEEEEETTSCSCEEEECSSC----SSEEEEEEEGGGTEEEEEECSS--SCEEEEEETTSCSCEEEE-CSSCS--CEEE
T ss_pred CCEEEEEECCCCcEEEEEeCCC----CCccEEEEeCCCCEEEEEecCC--CCEEEEEEcCCCCeEEEE-ECCCC--CccE
Confidence 4567777775443333311100 11123433 58999986431 247889998754333321 11111 2224
Q ss_pred EEEE--CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEe-cCCCCeeEEEEEe-CCeEEEEE-CCcEEEEEECCCCc-E
Q 047931 241 TGVL--GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIH-QDPNNVWPLCLWK-NSTKLLVI-NRKNLLVCDCNNEG-S 314 (339)
Q Consensus 241 l~~~--~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i-~~~~~~~~~~~~~-~~~i~~~~-~~~~~~~yd~~t~~-~ 314 (339)
|+.. +|+||++......|....++ +. .. ..+ ...+ ..|.++.- ++.+++.- ...++..+|..+++ .
T Consensus 171 lavd~~~~~lY~aD~~~~~I~~~d~d--G~-~~----~~~~~~~~-~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~ 242 (318)
T 3sov_A 171 LTLDYEEQKLYWADAKLNFIHKSNLD--GT-NR----QAVVKGSL-PHPFALTLFEDILYWTDWSTHSILACNKYTGEGL 242 (318)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETT--SC-SC----EEEECSCC-SCEEEEEEETTEEEEEETTTTEEEEEETTTCCSC
T ss_pred EEEeccCCEEEEEECCCCEEEEEcCC--CC-ce----EEEecCCC-CCceEEEEeCCEEEEEecCCCeEEEEECCCCCce
Confidence 5554 78999988766665544443 21 11 112 1123 45666554 33455543 34579999997665 3
Q ss_pred EEe
Q 047931 315 EDV 317 (339)
Q Consensus 315 ~~v 317 (339)
+.+
T Consensus 243 ~~i 245 (318)
T 3sov_A 243 REI 245 (318)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 216
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=34.34 E-value=3.1e+02 Score=26.06 Aligned_cols=100 Identities=11% Similarity=0.118 Sum_probs=0.0
Q ss_pred EEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEECCeEEEEEeCCCeEEEEEEcccCCCCCeEEE----EEe
Q 047931 203 WRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVLGDCLCLQFFKGKMKEHWIMKEYGVKESWTRV----FIH 278 (339)
Q Consensus 203 w~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~----~~i 278 (339)
|++... .+..||..+++|.. |..........+...+|.|++.... .+..+..+. .+.... ..+
T Consensus 77 WigT~~----Gl~~yd~~~~~f~~---~~~~~~~~i~~i~~~~g~lWigt~~--Gl~~~~~~~----~~~~~~~~~~~~l 143 (758)
T 3ott_A 77 YMGTDN----GILVYNYRADRYEQ---PETDFPTDVRTMALQGDTLWLGALN--GLYTYQLQS----RKLTSFDTRRNGL 143 (758)
T ss_dssp EEEETT----EEEEEETTTTEECC---CSCCCCSCEEEEEEETTEEEEEETT--EEEEEETTT----CCEEEECHHHHCC
T ss_pred EEEeCC----CeEEEeCCCCEEEC---cccCCCceEEEEEecCCcEEEEcCC--cceeEeCCC----CeEEEeccCCCCc
Q ss_pred cCCCCeeEEEEEeCCeEEEEECCcEEEEEECCCCcEEEe
Q 047931 279 QDPNNVWPLCLWKNSTKLLVINRKNLLVCDCNNEGSEDV 317 (339)
Q Consensus 279 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~yd~~t~~~~~v 317 (339)
+... +.-+....+|.+.+....+ ++.||.++++++.+
T Consensus 144 ~~~~-i~~i~~d~~g~lWigt~~G-l~~~~~~~~~~~~~ 180 (758)
T 3ott_A 144 PNNT-IYSIIRTKDNQIYVGTYNG-LCRYIPSNGKFEGI 180 (758)
T ss_dssp SCSC-EEEEEECTTCCEEEEETTE-EEEEETTTTEEEEE
T ss_pred CCCe-EEEEEEcCCCCEEEEeCCC-HhhCccCCCceEEe
No 217
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=33.59 E-value=3.1e+02 Score=25.86 Aligned_cols=28 Identities=18% Similarity=0.043 Sum_probs=21.1
Q ss_pred CCceEECCeEEEEEecCCCCeEEEEEECCCce
Q 047931 192 VPGTLTNGALHWRLQKHGGDFVLAAFDLVEER 223 (339)
Q Consensus 192 ~~~v~~~G~lyw~~~~~~~~~~il~fD~~~~~ 223 (339)
...++.+|.+|.-...+ .+.++|.+|.+
T Consensus 122 ~~~a~~~~~v~v~~~dg----~l~alD~~tG~ 149 (677)
T 1kb0_A 122 RGVALWKGKVYVGAWDG----RLIALDAATGK 149 (677)
T ss_dssp CCCEEETTEEEEECTTS----EEEEEETTTCC
T ss_pred CCceEECCEEEEEcCCC----EEEEEECCCCC
Confidence 34567889999876554 89999997654
No 218
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=33.45 E-value=2.4e+02 Score=24.43 Aligned_cols=65 Identities=14% Similarity=0.039 Sum_probs=41.2
Q ss_pred CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecC-CCCeeEEEEEeCCe-EEEE-ECCcEEEEEECCCC
Q 047931 245 GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQD-PNNVWPLCLWKNST-KLLV-INRKNLLVCDCNNE 312 (339)
Q Consensus 245 ~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~-~~~~~~~~~~~~~~-i~~~-~~~~~~~~yd~~t~ 312 (339)
++.+++.......+.||.++... .......+.. .-.+.-+++.+++. +++. ..++.+.+||+++.
T Consensus 243 ~~~~l~s~~~dg~i~i~d~~~~~---~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~ 310 (430)
T 2xyi_A 243 HESLFGSVADDQKLMIWDTRNNN---TSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 310 (430)
T ss_dssp CTTEEEEEETTSEEEEEETTCSC---SSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCT
T ss_pred CCCEEEEEeCCCeEEEEECCCCC---CCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCC
Confidence 56777777788999999998632 1112223322 22356677777775 4544 44567999999873
No 219
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=33.40 E-value=3.1e+02 Score=25.71 Aligned_cols=132 Identities=11% Similarity=0.004 Sum_probs=0.0
Q ss_pred CCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEECCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEE
Q 047931 198 NGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVLGDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFI 277 (339)
Q Consensus 198 ~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~ 277 (339)
++.|||..... ..|.++++ +.+.+..-+-........+.+...+|.||+.......-.||...-.|....-.....
T Consensus 400 ~~nLY~td~~~---~~I~v~~~-~G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~~~ 475 (628)
T 4a0p_A 400 SRYIYWTCEAT---NVINVTRL-DGRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSG 475 (628)
T ss_dssp TTEEEEEETTT---TEEEEEET-TSCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEEECSS
T ss_pred CCeEEEEcCCC---CEEEEEEC-CCCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEEEecc
Q ss_pred ecCCCCeeEEEEEeCCeEEEEECC--cEEEEEECCCCcEEEeEEeCCCCccceeEEecCCc
Q 047931 278 HQDPNNVWPLCLWKNSTKLLVINR--KNLLVCDCNNEGSEDVAVADVPNWNSACVYVESLV 336 (339)
Q Consensus 278 i~~~~~~~~~~~~~~~~i~~~~~~--~~~~~yd~~t~~~~~v~~~~~~~~~~~~~y~~sl~ 336 (339)
+.. -.-+++...++-++..+. .++..+|++....+.+.-.+...-+...++...|.
T Consensus 476 l~~---P~gla~D~~~~~LYw~D~~~~~I~~~~~dG~~r~~~~~~~~~~P~glav~~~~ly 533 (628)
T 4a0p_A 476 LSK---PIALALDSRLGKLFWADSDLRRIESSDLSGANRIVLEDSNILQPVGLTVFENWLY 533 (628)
T ss_dssp CSC---EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCEEEEEEETTEEE
T ss_pred CCC---ccEEEEeCCCCEEEEEeCCCCEEEEEeCCCCceEEEEcCCCCCcEEEEEECCEEE
No 220
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=33.33 E-value=2.2e+02 Score=23.92 Aligned_cols=135 Identities=7% Similarity=-0.054 Sum_probs=76.1
Q ss_pred CcEEEEEEeCCCceEEecccCCccCccCCCceEE---CCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeE
Q 047931 164 NMSVAIFSLRMNSWRRVLASGYTRPLINVPGTLT---NGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFG 240 (339)
Q Consensus 164 ~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~ 240 (339)
.-.+.+|+..++.....-...... ..-.++.+ +|.....+..+ ..|..+|+.++....+........ ....
T Consensus 95 dg~i~iwd~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~~l~s~~~d---~~i~iwd~~~~~~~~~~~~~~~~~-~v~~ 168 (383)
T 3ei3_B 95 GGDIILWDYDVQNKTSFIQGMGPG--DAITGMKFNQFNTNQLFVSSIR---GATTLRDFSGSVIQVFAKTDSWDY-WYCC 168 (383)
T ss_dssp TSCEEEEETTSTTCEEEECCCSTT--CBEEEEEEETTEEEEEEEEETT---TEEEEEETTSCEEEEEECCCCSSC-CEEE
T ss_pred CCeEEEEeCCCcccceeeecCCcC--CceeEEEeCCCCCCEEEEEeCC---CEEEEEECCCCceEEEeccCCCCC-CeEE
Confidence 446888888877665542211000 01112222 23333333332 488899999877777654433221 1223
Q ss_pred EEEE-CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecC-CCCeeEEEEEeCCe-EEEEE-CCcEEEEEECCC
Q 047931 241 TGVL-GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQD-PNNVWPLCLWKNST-KLLVI-NRKNLLVCDCNN 311 (339)
Q Consensus 241 l~~~-~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~-~~~~~~~~~~~~~~-i~~~~-~~~~~~~yd~~t 311 (339)
+... +|.+.+....+..+.+|.++. . ...++.. .-.+.-+++.+++. +++.. .++.+..||+++
T Consensus 169 ~~~~~~~~~l~~~~~d~~i~i~d~~~----~---~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 169 VDVSVSRQMLATGDSTGRLLLLGLDG----H---EIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp EEEETTTTEEEEEETTSEEEEEETTS----C---EEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred EEECCCCCEEEEECCCCCEEEEECCC----C---EEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 3333 777777667888999999842 1 2233332 22256667777776 55544 456799999987
No 221
>2qkl_A DCP1 protein, SPBC3B9.21 protein; protein-protein complex, hydrolase; 2.33A {Schizosaccharomyces pombe} PDB: 2qkm_A*
Probab=32.88 E-value=26 Score=25.39 Aligned_cols=28 Identities=4% Similarity=0.059 Sum_probs=15.0
Q ss_pred eEEEEECCcEEEEEECCCCcEEEeEEeC
Q 047931 294 TKLLVINRKNLLVCDCNNEGSEDVAVAD 321 (339)
Q Consensus 294 ~i~~~~~~~~~~~yd~~t~~~~~v~~~~ 321 (339)
+|+.....-.++.||.++++|++.++.|
T Consensus 25 ~Il~~a~~v~vY~f~~~~~~W~K~~iEG 52 (127)
T 2qkl_A 25 SIIDIASHVAVYQFDVGSQKWLKTSIEG 52 (127)
T ss_dssp EEEEEEEEEEEECC------CCEEEEEE
T ss_pred HHhccCCeEEEEEecCCCCceEEcCcEE
Confidence 3555554445777778899999999887
No 222
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=32.69 E-value=21 Score=20.45 Aligned_cols=18 Identities=28% Similarity=0.300 Sum_probs=12.8
Q ss_pred CCCcHHHHHHHHccCCcc
Q 047931 2 ATIPHEIIFEILLRLPVK 19 (339)
Q Consensus 2 ~~Lp~Dll~eIL~rLP~~ 19 (339)
..||.|+-+|||+--...
T Consensus 22 ~~LP~dIQ~Ells~~~~e 39 (48)
T 2kwv_A 22 KQLPADIQEEILSGKSRE 39 (48)
T ss_dssp TTSCHHHHHHHTTCCCSC
T ss_pred HHCcHHHHHHHHhcchHH
Confidence 358888888888765533
No 223
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=32.22 E-value=2e+02 Score=23.21 Aligned_cols=116 Identities=10% Similarity=-0.035 Sum_probs=62.4
Q ss_pred CeEEEEEecCCCCeEEEEEECCCceeeee-cCCCCCCCCceeEEEEE-CC----eEEEEEeCCCeEEEEEEcccCC----
Q 047931 199 GALHWRLQKHGGDFVLAAFDLVEERFKEF-PLPDASTSFRFFGTGVL-GD----CLCLQFFKGKMKEHWIMKEYGV---- 268 (339)
Q Consensus 199 G~lyw~~~~~~~~~~il~fD~~~~~~~~i-~lP~~~~~~~~~~l~~~-~G----~L~~v~~~~~~l~iW~l~~~~~---- 268 (339)
+.....+... ..++..+..+++...+ .++.... ....+... +| .+.+....+..+.+|.+.....
T Consensus 182 ~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~h~~--~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 256 (351)
T 3f3f_A 182 PEKLAVSALE---QAIIYQRGKDGKLHVAAKLPGHKS--LIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLAS 256 (351)
T ss_dssp CCEEEEEETT---EEEEEEECTTSCEEEEEECCCCCS--CEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-----
T ss_pred CcEEEEecCC---CcEEEEccCCCceeeeeecCCCCc--ceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCcccc
Confidence 4444444443 4556666666655433 3332221 12233333 44 5666666888999999985210
Q ss_pred ------------------------------------CCCeEEEEEecCC-CCeeEEEEEeCCeEEEEE-CCcEEEEEECC
Q 047931 269 ------------------------------------KESWTRVFIHQDP-NNVWPLCLWKNSTKLLVI-NRKNLLVCDCN 310 (339)
Q Consensus 269 ------------------------------------~~~W~~~~~i~~~-~~~~~~~~~~~~~i~~~~-~~~~~~~yd~~ 310 (339)
...+.....+... -.+.-+++.+++.+++.. .++.+.+||++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~ 336 (351)
T 3f3f_A 257 EESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKAT 336 (351)
T ss_dssp ----------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred CCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecC
Confidence 0012223333221 125566677777755544 45679999998
Q ss_pred CCc-EEEeEE
Q 047931 311 NEG-SEDVAV 319 (339)
Q Consensus 311 t~~-~~~v~~ 319 (339)
+++ ++.+..
T Consensus 337 ~~~~~~~~~~ 346 (351)
T 3f3f_A 337 YSNEFKCMSV 346 (351)
T ss_dssp TTSCEEEEEE
T ss_pred cCcchhheee
Confidence 864 666643
No 224
>1q67_A Decapping protein involved in mRNA degradation- DCP1P; beta sandwich, transcription; 2.30A {Saccharomyces cerevisiae} SCOP: b.55.1.7
Probab=32.09 E-value=78 Score=25.02 Aligned_cols=28 Identities=11% Similarity=0.108 Sum_probs=23.6
Q ss_pred eEEEEECCcEEEEEECCCCcEEEeEEeC
Q 047931 294 TKLLVINRKNLLVCDCNNEGSEDVAVAD 321 (339)
Q Consensus 294 ~i~~~~~~~~~~~yd~~t~~~~~v~~~~ 321 (339)
+|++......++.||.++++|.+..++|
T Consensus 36 qIL~~t~hasvYkfd~~~~eW~K~~~eG 63 (231)
T 1q67_A 36 QLLFHTPHASLYKWDFKKDEWNKLEYQG 63 (231)
T ss_dssp EEEEEEEEEEEEEEETTTTEEEEEEEEE
T ss_pred HHHhcCCeEEEEEecCCCCceEecCcEE
Confidence 4666665567999999999999999988
No 225
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=31.70 E-value=2.3e+02 Score=23.74 Aligned_cols=126 Identities=6% Similarity=-0.102 Sum_probs=0.0
Q ss_pred CCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEE
Q 047931 198 NGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVF 276 (339)
Q Consensus 198 ~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~ 276 (339)
+|.....+..+ ..|..+|+.+.+....--.... .-..+... +|.+.+....+..+.+|.+.. .+-....
T Consensus 209 ~g~~l~sgs~D---g~v~~wd~~~~~~~~~~~~h~~---~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~----~~~~~~~ 278 (354)
T 2pbi_B 209 TGNTFVSGGCD---KKAMVWDMRSGQCVQAFETHES---DVNSVRYYPSGDAFASGSDDATCRLYDLRA----DREVAIY 278 (354)
T ss_dssp SCCEEEEEETT---SCEEEEETTTCCEEEEECCCSS---CEEEEEECTTSSEEEEEETTSCEEEEETTT----TEEEEEE
T ss_pred CCCEEEEEeCC---CeEEEEECCCCcEEEEecCCCC---CeEEEEEeCCCCEEEEEeCCCeEEEEECCC----CcEEEEE
Q ss_pred EecC-CCCeeEEEEEeCCeEEEEECCcE-EEEEECCCCcEEEeEEeCCCCccceeEEecC
Q 047931 277 IHQD-PNNVWPLCLWKNSTKLLVINRKN-LLVCDCNNEGSEDVAVADVPNWNSACVYVES 334 (339)
Q Consensus 277 ~i~~-~~~~~~~~~~~~~~i~~~~~~~~-~~~yd~~t~~~~~v~~~~~~~~~~~~~y~~s 334 (339)
.-.. ..+...+++.++|.+++...... +..||..+++ ....+.+....-..+.|.+.
T Consensus 279 ~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~-~~~~l~~h~~~v~~l~~spd 337 (354)
T 2pbi_B 279 SKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGS-RVSILFGHENRVSTLRVSPD 337 (354)
T ss_dssp CCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS-EEEEECCCSSCEEEEEECTT
T ss_pred cCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCc-eEEEEECCCCcEEEEEECCC
No 226
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=31.19 E-value=3.3e+02 Score=25.36 Aligned_cols=189 Identities=8% Similarity=0.039 Sum_probs=93.5
Q ss_pred CEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCC-ceEEeccc--CCcc
Q 047931 112 KIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMN-SWRRVLAS--GYTR 187 (339)
Q Consensus 112 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~-~W~~~~~~--~~~~ 187 (339)
..++++|..+++...+...... ......+.+ .++.+-++...........+.+++..++ ..+.+... ....
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~-----~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~ 309 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPK-----EKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYV 309 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCT-----TCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCC
T ss_pred eEEEEEECCCCceEeeccCCCC-----ceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeE
Confidence 5799999999887665432111 001333444 3344433332201112357778888887 67665321 1111
Q ss_pred CccCCCceEE--CCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCe-EEEEEeCCC--eEEEE
Q 047931 188 PLINVPGTLT--NGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDC-LCLQFFKGK--MKEHW 261 (339)
Q Consensus 188 ~~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~-L~~v~~~~~--~l~iW 261 (339)
.........- +|.+.+..... ....|..+|...+..+.+.. .... ....++.. +|+ |++...... ...||
T Consensus 310 ~~~~~~~~sp~~dg~~l~~~~~~-g~~~l~~~~~~~~~~~~l~~--~~~~-v~~~~~~spdg~~l~~~~~~~~~~~~~l~ 385 (706)
T 2z3z_A 310 EPLHPLTFLPGSNNQFIWQSRRD-GWNHLYLYDTTGRLIRQVTK--GEWE-VTNFAGFDPKGTRLYFESTEASPLERHFY 385 (706)
T ss_dssp CCCSCCEECTTCSSEEEEEECTT-SSCEEEEEETTSCEEEECCC--SSSC-EEEEEEECTTSSEEEEEESSSCTTCBEEE
T ss_pred CccCCceeecCCCCEEEEEEccC-CccEEEEEECCCCEEEecCC--CCeE-EEeeeEEcCCCCEEEEEecCCCCceEEEE
Confidence 0001111222 78866655443 34567788877766665532 1110 11113333 554 555444332 56777
Q ss_pred EEcccCCCCCeEEEEEecCCCCeeEEEEEeCCeEE-EEECC----cEEEEEECCCCcE
Q 047931 262 IMKEYGVKESWTRVFIHQDPNNVWPLCLWKNSTKL-LVINR----KNLLVCDCNNEGS 314 (339)
Q Consensus 262 ~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~i~-~~~~~----~~~~~yd~~t~~~ 314 (339)
.++-.+ ... ..+...-+..-+++.++|+.+ +...+ ..++.+|.++++.
T Consensus 386 ~~d~~~--~~~---~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~~ 438 (706)
T 2z3z_A 386 CIDIKG--GKT---KDLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGSH 438 (706)
T ss_dssp EEETTC--CCC---EESCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCEE
T ss_pred EEEcCC--CCc---eeccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCeE
Confidence 776422 222 223222234556777788644 43322 3599999998873
No 227
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=30.99 E-value=2.2e+02 Score=23.33 Aligned_cols=94 Identities=7% Similarity=0.067 Sum_probs=54.2
Q ss_pred eEEEEEECCCceeeeecCCCCCCCCceeEEEEE-------CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecC-CCC
Q 047931 212 FVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-------GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQD-PNN 283 (339)
Q Consensus 212 ~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-------~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~-~~~ 283 (339)
..|..+|+..+....+...... ...+... ++.+.+....+..+.+|.++.. .....+.. .-.
T Consensus 129 ~~i~vwd~~~~~~~~~~~h~~~----v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~------~~~~~~~~h~~~ 198 (319)
T 3frx_A 129 KTIKVWTIKGQCLATLLGHNDW----VSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQF------QIEADFIGHNSN 198 (319)
T ss_dssp SCEEEEETTSCEEEEECCCSSC----EEEEEECCC------CCEEEEEETTSCEEEEETTTT------EEEEEECCCCSC
T ss_pred CeEEEEECCCCeEEEEeccCCc----EEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcc------hhheeecCCCCc
Confidence 4677888877655544321111 1111111 3344555558889999998752 23333322 222
Q ss_pred eeEEEEEeCCeEEEEE-CCcEEEEEECCCCcEE
Q 047931 284 VWPLCLWKNSTKLLVI-NRKNLLVCDCNNEGSE 315 (339)
Q Consensus 284 ~~~~~~~~~~~i~~~~-~~~~~~~yd~~t~~~~ 315 (339)
+.-+++.++|..++.. .++.+..||+++++..
T Consensus 199 v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~ 231 (319)
T 3frx_A 199 INTLTASPDGTLIASAGKDGEIMLWNLAAKKAM 231 (319)
T ss_dssp EEEEEECTTSSEEEEEETTCEEEEEETTTTEEE
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 5667777888766654 4567999999988743
No 228
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=30.93 E-value=2.7e+02 Score=25.89 Aligned_cols=78 Identities=9% Similarity=0.096 Sum_probs=45.0
Q ss_pred EEEEEEeCCC--ceEEecccCCccCccCCCceEECCeEEEEEecCCCCeEEEEEECCCce-eeeecCCCCCCCCceeEEE
Q 047931 166 SVAIFSLRMN--SWRRVLASGYTRPLINVPGTLTNGALHWRLQKHGGDFVLAAFDLVEER-FKEFPLPDASTSFRFFGTG 242 (339)
Q Consensus 166 ~~~vyss~~~--~W~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~~~-~~~i~lP~~~~~~~~~~l~ 242 (339)
.+..++..++ .|+.-...+. .....+..+|.+|.-+.+ ..+.+||.++.+ ....++|..... .+..-
T Consensus 454 ~l~A~D~~tG~~~W~~~~~~~~----~~g~~~tagg~vf~gt~d----g~l~A~D~~tG~~lW~~~l~~g~~~--~P~~y 523 (599)
T 1w6s_A 454 QIKAYNAITGDYKWEKMERFAV----WGGTMATAGDLVFYGTLD----GYLKARDSDTGDLLWKFKIPSGAIG--YPMTY 523 (599)
T ss_dssp EEEEECTTTCCEEEEEEESSCC----CSBCEEETTTEEEEECTT----SEEEEEETTTCCEEEEEECSSCCCS--CCEEE
T ss_pred eEEEEECCCCCEEeEecCCCCc----cCcceEecCCEEEEECCC----CeEEEEECCCCCEEEEeeCCCCcEe--ccEEE
Confidence 3444555554 5776432221 122234457777774444 489999998765 233477765432 23333
Q ss_pred EECCeEEEEEe
Q 047931 243 VLGDCLCLQFF 253 (339)
Q Consensus 243 ~~~G~L~~v~~ 253 (339)
+.+|++|++..
T Consensus 524 ~~~G~qyv~~~ 534 (599)
T 1w6s_A 524 THKGTQYVAIY 534 (599)
T ss_dssp EETTEEEEEEE
T ss_pred EeCCEEEEEEE
Confidence 57999998776
No 229
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=30.58 E-value=2.4e+02 Score=23.60 Aligned_cols=98 Identities=9% Similarity=-0.018 Sum_probs=49.9
Q ss_pred CeEEEEEECCCceeeeecCCCCCCCCceeEEEEE--CCe-EEEEEeC---CCeEEEEEEcccCCCCCeEEEEEecC-CCC
Q 047931 211 DFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL--GDC-LCLQFFK---GKMKEHWIMKEYGVKESWTRVFIHQD-PNN 283 (339)
Q Consensus 211 ~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~--~G~-L~~v~~~---~~~l~iW~l~~~~~~~~W~~~~~i~~-~~~ 283 (339)
...|..+|+.+.+...+.-... ....+... +|+ |.++... .....||.++-.+ .... .+.. .-+
T Consensus 167 ~~~l~~~d~~~g~~~~l~~~~~----~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~--~~~~---~l~~~~~~ 237 (388)
T 3pe7_A 167 CCRLMRVDLKTGESTVILQENQ----WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDG--TNMR---KVKTHAEG 237 (388)
T ss_dssp CEEEEEEETTTCCEEEEEEESS----CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTS--CCCE---ESCCCCTT
T ss_pred cceEEEEECCCCceEEeecCCc----cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCC--CceE---EeeeCCCC
Confidence 3578899999887666531111 11122222 454 4333332 1245677776322 1111 2211 111
Q ss_pred --eeEEEEEeCCe-EEEEEC--C-c--EEEEEECCCCcEEEe
Q 047931 284 --VWPLCLWKNST-KLLVIN--R-K--NLLVCDCNNEGSEDV 317 (339)
Q Consensus 284 --~~~~~~~~~~~-i~~~~~--~-~--~~~~yd~~t~~~~~v 317 (339)
..-..+.++|+ +++... . . .++.+|+++++.+.+
T Consensus 238 ~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l 279 (388)
T 3pe7_A 238 ESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQL 279 (388)
T ss_dssp EEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEE
T ss_pred cccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEE
Confidence 22335667775 545432 1 1 399999999997766
No 230
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=30.27 E-value=2.3e+02 Score=23.23 Aligned_cols=69 Identities=7% Similarity=0.012 Sum_probs=43.0
Q ss_pred CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecC-CCCeeEEEEEe--CCeEEEE-ECCcEEEEEECCCCcEEEe
Q 047931 245 GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQD-PNNVWPLCLWK--NSTKLLV-INRKNLLVCDCNNEGSEDV 317 (339)
Q Consensus 245 ~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~-~~~~~~~~~~~--~~~i~~~-~~~~~~~~yd~~t~~~~~v 317 (339)
+|++.+....+..+.||.++. .......++.. .-.+.-+++.. ++++++. ..++.+..||+++++++.+
T Consensus 24 ~g~~lasgs~D~~v~lwd~~~----~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~ 96 (316)
T 3bg1_A 24 YGTRLATCSSDRSVKIFDVRN----GGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKS 96 (316)
T ss_dssp GGCEEEEEETTTEEEEEEEET----TEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEE
T ss_pred CCCEEEEEeCCCeEEEEEecC----CCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEE
Confidence 677766666888999999975 22333445543 21244555543 3555554 4466799999998765443
No 231
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=30.21 E-value=2.9e+02 Score=25.50 Aligned_cols=78 Identities=12% Similarity=-0.081 Sum_probs=45.5
Q ss_pred EEEEEEeCCC--ceEEecccCCccCccCCCceEECCeEEEEEecCCCCeEEEEEECCCce-eeeecCCCCCCCCceeEEE
Q 047931 166 SVAIFSLRMN--SWRRVLASGYTRPLINVPGTLTNGALHWRLQKHGGDFVLAAFDLVEER-FKEFPLPDASTSFRFFGTG 242 (339)
Q Consensus 166 ~~~vyss~~~--~W~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~~~-~~~i~lP~~~~~~~~~~l~ 242 (339)
.+..++..++ .|+.-...+. .....+..+|.+|.-+.+ ..+.+||.++.+ ...+++|..... .+..-
T Consensus 467 ~l~A~D~~tG~~~W~~~~~~~~----~~g~~~tagglvf~g~~d----g~l~A~D~~tG~~lW~~~~~~g~~a--~P~~y 536 (582)
T 1flg_A 467 SLRAMDPVSGKVVWEHKEHLPL----WAGVLATAGNLVFTGTGD----GYFKAFDAKSGKELWKFQTGSGIVS--PPITW 536 (582)
T ss_dssp EEEEECTTTCCEEEEEEESSCC----CSCCEEETTTEEEEECTT----SEEEEEETTTCCEEEEEECSSCCCS--CCEEE
T ss_pred eEEEEECCCCCEEEEecCCCCC----cccceEeCCCEEEEECCC----CcEEEEECCCCCEEEEecCCCCccc--CceEE
Confidence 3455566555 5876532221 123335567777774333 489999998765 334566655432 22223
Q ss_pred EECCeEEEEEe
Q 047931 243 VLGDCLCLQFF 253 (339)
Q Consensus 243 ~~~G~L~~v~~ 253 (339)
+.+|++|++..
T Consensus 537 ~~~G~qYv~~~ 547 (582)
T 1flg_A 537 EQDGEQYLGVT 547 (582)
T ss_dssp EETTEEEEEEE
T ss_pred EECCEEEEEEE
Confidence 57999998876
No 232
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=30.07 E-value=3.3e+02 Score=25.08 Aligned_cols=110 Identities=6% Similarity=-0.133 Sum_probs=62.2
Q ss_pred CCeEEEEEecCCCCeEEEEEECCCcee-eeecCCCCCCCCceeEEEEE-CCeEEEEEeCCCeEEEEEEcccCCCCCeEEE
Q 047931 198 NGALHWRLQKHGGDFVLAAFDLVEERF-KEFPLPDASTSFRFFGTGVL-GDCLCLQFFKGKMKEHWIMKEYGVKESWTRV 275 (339)
Q Consensus 198 ~G~lyw~~~~~~~~~~il~fD~~~~~~-~~i~lP~~~~~~~~~~l~~~-~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~ 275 (339)
++.+|...... ..|..+|..+.+. ..++..... ..+... +|+..++......+.+|.+.. ++-..+
T Consensus 166 ~~~~~V~~~~~---~~V~viD~~t~~v~~~i~~g~~p-----~~v~~SpDGr~lyv~~~dg~V~viD~~~----~t~~~v 233 (567)
T 1qks_A 166 ENLFSVTLRDA---GQIALIDGSTYEIKTVLDTGYAV-----HISRLSASGRYLFVIGRDGKVNMIDLWM----KEPTTV 233 (567)
T ss_dssp GGEEEEEETTT---TEEEEEETTTCCEEEEEECSSCE-----EEEEECTTSCEEEEEETTSEEEEEETTS----SSCCEE
T ss_pred CceEEEEeCCC---CeEEEEECCCCeEEEEEeCCCCc-----cceEECCCCCEEEEEcCCCeEEEEECCC----CCCcEe
Confidence 34555444332 5899999998654 345543221 233433 777655555556777777641 112344
Q ss_pred EEecCCCCeeEEEEE----eCCeEEEEEC--CcEEEEEECCCCcEE-EeEE
Q 047931 276 FIHQDPNNVWPLCLW----KNSTKLLVIN--RKNLLVCDCNNEGSE-DVAV 319 (339)
Q Consensus 276 ~~i~~~~~~~~~~~~----~~~~i~~~~~--~~~~~~yd~~t~~~~-~v~~ 319 (339)
.+|....+-.-+++. ++|+.++..+ ...+.++|.+|.+.. .+..
T Consensus 234 ~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~ 284 (567)
T 1qks_A 234 AEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQST 284 (567)
T ss_dssp EEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEEC
T ss_pred EEEecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEec
Confidence 566543223455677 4776555443 346899999888744 4443
No 233
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=29.46 E-value=2.4e+02 Score=23.32 Aligned_cols=94 Identities=6% Similarity=-0.075 Sum_probs=54.2
Q ss_pred eEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecCCCCeeEEEEE
Q 047931 212 FVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQDPNNVWPLCLW 290 (339)
Q Consensus 212 ~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~ 290 (339)
..|..+|...+....+..... .-..+... +|++.+....+..+.||.+...+. . ...+...-.+.-+++.
T Consensus 194 ~~i~iwd~~~~~~~~~~~h~~----~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~-~----~~~~~~~~~v~~v~~s 264 (343)
T 2xzm_R 194 GRLKVWNTNFQIRYTFKAHES----NVNHLSISPNGKYIATGGKDKKLLIWDILNLTY-P----QREFDAGSTINQIAFN 264 (343)
T ss_dssp SEEEEEETTTEEEEEEECCSS----CEEEEEECTTSSEEEEEETTCEEEEEESSCCSS-C----SEEEECSSCEEEEEEC
T ss_pred CEEEEEcCCCceeEEEcCccc----cceEEEECCCCCEEEEEcCCCeEEEEECCCCcc-c----ceeecCCCcEEEEEEC
Confidence 477778855443333321111 12233333 777777667889999999854221 1 1122121125566777
Q ss_pred eCCeEEEEECCcEEEEEECCCCcE
Q 047931 291 KNSTKLLVINRKNLLVCDCNNEGS 314 (339)
Q Consensus 291 ~~~~i~~~~~~~~~~~yd~~t~~~ 314 (339)
+++.++....+..+..||+.+++.
T Consensus 265 p~~~~la~~~d~~v~iw~~~~~~~ 288 (343)
T 2xzm_R 265 PKLQWVAVGTDQGVKIFNLMTQSK 288 (343)
T ss_dssp SSSCEEEEEESSCEEEEESSSCCS
T ss_pred CCCCEEEEECCCCEEEEEeCCCCC
Confidence 787777666666799999987664
No 234
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=29.25 E-value=2.8e+02 Score=23.92 Aligned_cols=135 Identities=7% Similarity=-0.038 Sum_probs=72.3
Q ss_pred CcEEEEEEeCCCceEEecccCCccCccCCCceEECCeEEEEEecCCCCeEEEEEECCCceee-eecCCCCCCCCceeEEE
Q 047931 164 NMSVAIFSLRMNSWRRVLASGYTRPLINVPGTLTNGALHWRLQKHGGDFVLAAFDLVEERFK-EFPLPDASTSFRFFGTG 242 (339)
Q Consensus 164 ~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~~~~~-~i~lP~~~~~~~~~~l~ 242 (339)
...+.+|+..++.-... +... ...-..+..+|.+...+..+ ..|..+|+.+.+.. .+.... ....-.
T Consensus 152 dg~i~iwd~~~~~~~~~--~~~h--~~~v~~l~~~~~~l~sg~~d---g~i~vwd~~~~~~~~~~~~h~-----~~v~~l 219 (435)
T 1p22_A 152 DNTIKIWDKNTLECKRI--LTGH--TGSVLCLQYDERVIITGSSD---STVRVWDVNTGEMLNTLIHHC-----EAVLHL 219 (435)
T ss_dssp SSCEEEEESSSCCEEEE--ECCC--SSCEEEEECCSSEEEEEETT---SCEEEEESSSCCEEEEECCCC-----SCEEEE
T ss_pred CCeEEEEeCCCCeEEEE--EcCC--CCcEEEEEECCCEEEEEcCC---CeEEEEECCCCcEEEEEcCCC-----CcEEEE
Confidence 45678888776543222 1111 01112345577766555544 57889999876543 223211 112222
Q ss_pred EECCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecC-CCCeeEEEEEeCCe-EEEEECCcEEEEEECCCCcEE
Q 047931 243 VLGDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQD-PNNVWPLCLWKNST-KLLVINRKNLLVCDCNNEGSE 315 (339)
Q Consensus 243 ~~~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~-~~~~~~~~~~~~~~-i~~~~~~~~~~~yd~~t~~~~ 315 (339)
..++.+.+....+..+.+|.++.. ........+.. ...+.-+.+ +++ ++....++.+..||+++++..
T Consensus 220 ~~~~~~l~s~s~dg~i~vwd~~~~---~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~ 289 (435)
T 1p22_A 220 RFNNGMMVTCSKDRSIAVWDMASP---TDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFV 289 (435)
T ss_dssp ECCTTEEEEEETTSCEEEEECSSS---SCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEE
T ss_pred EEcCCEEEEeeCCCcEEEEeCCCC---CCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEE
Confidence 335556666668889999998852 22322233322 111333333 444 444555677999999988754
No 235
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=28.03 E-value=2.4e+02 Score=22.77 Aligned_cols=65 Identities=6% Similarity=0.053 Sum_probs=42.3
Q ss_pred CeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecCC-CCeeEEEEEeCC---eEEEEE-CCcEEEEEECCCC
Q 047931 246 DCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQDP-NNVWPLCLWKNS---TKLLVI-NRKNLLVCDCNNE 312 (339)
Q Consensus 246 G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~-~~~~~~~~~~~~---~i~~~~-~~~~~~~yd~~t~ 312 (339)
+++.+....+..+.||.++.. ...|....++... -.+.-+++.+++ ..+... .++.+..||+++.
T Consensus 170 ~~~l~sgs~D~~v~lwd~~~~--~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 170 SRKFVTGGADNLVKIWKYNSD--AQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp CCEEEEEETTSCEEEEEEETT--TTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred cceEEEEcCCCcEEEEEEcCC--CceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 455555668889999999852 2457666676542 225666777763 555543 4556999998774
No 236
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=27.86 E-value=3.8e+02 Score=25.01 Aligned_cols=97 Identities=6% Similarity=-0.086 Sum_probs=53.8
Q ss_pred eEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CC--eEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecCC-CCeeEE
Q 047931 212 FVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GD--CLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQDP-NNVWPL 287 (339)
Q Consensus 212 ~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G--~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~-~~~~~~ 287 (339)
..|..+|...+.-..+.............+... ++ .+.+....+..+.||.+... ....++... -.+.-+
T Consensus 494 ~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~------~~~~~~~~h~~~v~~v 567 (694)
T 3dm0_A 494 RTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNC------KLRSTLAGHTGYVSTV 567 (694)
T ss_dssp SCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTC------CEEEEECCCSSCEEEE
T ss_pred CEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCC------cEEEEEcCCCCCEEEE
Confidence 467778876654443322111111112223332 33 34444447889999998752 223344332 125667
Q ss_pred EEEeCCeEEEEE-CCcEEEEEECCCCcE
Q 047931 288 CLWKNSTKLLVI-NRKNLLVCDCNNEGS 314 (339)
Q Consensus 288 ~~~~~~~i~~~~-~~~~~~~yd~~t~~~ 314 (339)
++.++|.+++.. .++.+..||+++++.
T Consensus 568 ~~spdg~~l~sg~~Dg~i~iwd~~~~~~ 595 (694)
T 3dm0_A 568 AVSPDGSLCASGGKDGVVLLWDLAEGKK 595 (694)
T ss_dssp EECTTSSEEEEEETTSBCEEEETTTTEE
T ss_pred EEeCCCCEEEEEeCCCeEEEEECCCCce
Confidence 777888766654 456799999988763
No 237
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=26.22 E-value=2.7e+02 Score=22.87 Aligned_cols=68 Identities=6% Similarity=-0.120 Sum_probs=38.6
Q ss_pred EEEECCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecC--CC-CeeEEEEEe--CCeEEEE-ECCcEEEEEECCCC
Q 047931 241 TGVLGDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQD--PN-NVWPLCLWK--NSTKLLV-INRKNLLVCDCNNE 312 (339)
Q Consensus 241 l~~~~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~--~~-~~~~~~~~~--~~~i~~~-~~~~~~~~yd~~t~ 312 (339)
+.-..+.+.+....+..+.||.... ..|........ .. .+..+++.+ ++.++.. ..++.+..||+++.
T Consensus 256 v~~s~~~~l~s~~~dg~v~iw~~~~----~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~~ 329 (330)
T 2hes_X 256 VAWGFNGLIASVGADGVLAVYEEVD----GEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEKA 329 (330)
T ss_dssp EEECTTSCEEEEETTSCEEEEEEET----TEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC---
T ss_pred EEEcCCCEEEEEeCCCEEEEEEcCC----CceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEeccC
Confidence 3334555555555788999999874 45876655422 22 245566665 4555554 45667999998753
No 238
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=25.27 E-value=4e+02 Score=24.41 Aligned_cols=219 Identities=5% Similarity=-0.158 Sum_probs=0.0
Q ss_pred eeeeecCCCCcCCCCCCCCceeEEEeeeCceEEEccCCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCce
Q 047931 74 VSVELDFPLEQDANRDGSGYLARIVGSCNGLVCTTPKPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDC 152 (339)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~y 152 (339)
.....-.+.+....... ..+.-+-+|-.+.....+.+.++|+.+++....-..+.. ....+.+ .++.|
T Consensus 5 ~~~~~~~~~~~~~~g~~----~~~~~spdg~~l~~~~~~~v~l~~~~~~~~~~~~~~h~~-------~v~~~~~spdg~~ 73 (611)
T 1nr0_A 5 SQTALFPSLPRTARGTA----VVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSH-------QTTVAKTSPSGYY 73 (611)
T ss_dssp EEEEEECCCCCCCTTCC----CCCEECTTSSEEEEEETTEEEEEETTCSSCCEEECCCSS-------CEEEEEECTTSSE
T ss_pred ccccEECCCCCcccCce----eEEeeCCCCCEEEeCCCCEEEEecCCCcccCeEecCCCC-------ceEEEEECCCCcE
Q ss_pred EEEEEeeEeCCCcEEEEEEeCCCceEEecccCCccCccCCCceEECCeEEEEEecC-CCCeEEEEEECCCceeeeecCCC
Q 047931 153 KFIKVSFGLKPNMSVAIFSLRMNSWRRVLASGYTRPLINVPGTLTNGALHWRLQKH-GGDFVLAAFDLVEERFKEFPLPD 231 (339)
Q Consensus 153 kvv~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~v~~~G~lyw~~~~~-~~~~~il~fD~~~~~~~~i~lP~ 231 (339)
-+.+-. .-.+.+++..++.......++........-...-+|..-..+..+ +....|..+|..+..-....-..
T Consensus 74 lasg~~-----d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~ 148 (611)
T 1nr0_A 74 CASGDV-----HGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQAR 148 (611)
T ss_dssp EEEEET-----TSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSS
T ss_pred EEEEeC-----CCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCC
Q ss_pred CCCCCceeEEEEECCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecC-CCCeeEEEEEeCCeEEEEECCcE-EEEEEC
Q 047931 232 ASTSFRFFGTGVLGDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQD-PNNVWPLCLWKNSTKLLVINRKN-LLVCDC 309 (339)
Q Consensus 232 ~~~~~~~~~l~~~~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~-~~~~~~~~~~~~~~i~~~~~~~~-~~~yd~ 309 (339)
.. ........+..+.+....+..+.+|..+. .....++.. .-.+.-+++.++|+++......+ +..||.
T Consensus 149 ~v---~~v~f~p~~~~~l~s~s~D~~v~lwd~~~------~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~ 219 (611)
T 1nr0_A 149 AM---NSVDFKPSRPFRIISGSDDNTVAIFEGPP------FKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNG 219 (611)
T ss_dssp CE---EEEEECSSSSCEEEEEETTSCEEEEETTT------BEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred Cc---eEEEECCCCCeEEEEEeCCCeEEEEECCC------CeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEEC
Q ss_pred CCCcEEEe
Q 047931 310 NNEGSEDV 317 (339)
Q Consensus 310 ~t~~~~~v 317 (339)
++++....
T Consensus 220 ~~g~~~~~ 227 (611)
T 1nr0_A 220 VDGTKTGV 227 (611)
T ss_dssp TTCCEEEE
T ss_pred CCCcEeee
No 239
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=25.16 E-value=4.9e+02 Score=25.47 Aligned_cols=109 Identities=7% Similarity=-0.069 Sum_probs=0.0
Q ss_pred CCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEECCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEE
Q 047931 198 NGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVLGDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFI 277 (339)
Q Consensus 198 ~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~ 277 (339)
+|.+-..+..+ ..|..+|..+.+.... ++... .-..+.-..|++.+....+..+.||.++. =..+.+
T Consensus 28 dg~~lAsgs~D---g~I~lw~~~~~~~~~~-~~~~~---~V~~l~fspg~~L~S~s~D~~v~lWd~~~------~~~~~~ 94 (902)
T 2oaj_A 28 TQNLLAIATVT---GEVHIYGQQQVEVVIK-LEDRS---AIKEMRFVKGIYLVVINAKDTVYVLSLYS------QKVLTT 94 (902)
T ss_dssp TTTEEEEEETT---SEEEEECSTTCEEEEE-CSSCC---CEEEEEEETTTEEEEEETTCEEEEEETTT------CSEEEE
T ss_pred CCCEEEEEeCC---CEEEEEeCCCcEEEEE-cCCCC---CEEEEEEcCCCEEEEEECcCeEEEEECCC------CcEEEE
Q ss_pred ecCCCCeeEEEEEeCCeEEEEECCcE-EEEEECCCCcEEEeEE
Q 047931 278 HQDPNNVWPLCLWKNSTKLLVINRKN-LLVCDCNNEGSEDVAV 319 (339)
Q Consensus 278 i~~~~~~~~~~~~~~~~i~~~~~~~~-~~~yd~~t~~~~~v~~ 319 (339)
+...-.+.-+++.++++.++.....+ +..||+++++.....+
T Consensus 95 ~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i 137 (902)
T 2oaj_A 95 VFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKL 137 (902)
T ss_dssp EECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEE
T ss_pred EcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCcccccee
No 240
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=24.63 E-value=3e+02 Score=22.74 Aligned_cols=195 Identities=7% Similarity=-0.144 Sum_probs=95.5
Q ss_pred CceEEEc-cCCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEE
Q 047931 102 NGLVCTT-PKPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRR 179 (339)
Q Consensus 102 ~GLl~~~-~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~ 179 (339)
+|.+... .....++++||.+++...++.+ .. ..++.+ ..+.+- +. . ...+.+|+..++..+.
T Consensus 60 ~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~-~~--------v~~i~~~~dg~l~-v~-~-----~~gl~~~d~~~g~~~~ 123 (326)
T 2ghs_A 60 SGTAWWFNILERELHELHLASGRKTVHALP-FM--------GSALAKISDSKQL-IA-S-----DDGLFLRDTATGVLTL 123 (326)
T ss_dssp TTEEEEEEGGGTEEEEEETTTTEEEEEECS-SC--------EEEEEEEETTEEE-EE-E-----TTEEEEEETTTCCEEE
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEECC-Cc--------ceEEEEeCCCeEE-EE-E-----CCCEEEEECCCCcEEE
Confidence 3444333 2456888999988876554321 11 334444 334332 22 1 2357888888888876
Q ss_pred ecccCCccCccCCCce--EECCeEEEEEecC---CCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCe-EEEEE
Q 047931 180 VLASGYTRPLINVPGT--LTNGALHWRLQKH---GGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDC-LCLQF 252 (339)
Q Consensus 180 ~~~~~~~~~~~~~~~v--~~~G~lyw~~~~~---~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~-L~~v~ 252 (339)
+...+..........+ .-+|.+|.-.... .....|..+| +.+...+. .... ..-.++.. +|+ |++..
T Consensus 124 ~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~--~~~~--~~~~i~~s~dg~~lyv~~ 197 (326)
T 2ghs_A 124 HAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLF--ADIS--IPNSICFSPDGTTGYFVD 197 (326)
T ss_dssp EECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEE--EEES--SEEEEEECTTSCEEEEEE
T ss_pred EeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEee--CCCc--ccCCeEEcCCCCEEEEEE
Confidence 6433211100001122 2357765433221 1235788888 45555432 1111 11233433 664 66655
Q ss_pred eCCCeEEEEEEc-ccC-C-CCCeEEEEEecCCCCeeE--EEEEeCCeEEEEE-CCcEEEEEECCCCcEEEeEEe
Q 047931 253 FKGKMKEHWIMK-EYG-V-KESWTRVFIHQDPNNVWP--LCLWKNSTKLLVI-NRKNLLVCDCNNEGSEDVAVA 320 (339)
Q Consensus 253 ~~~~~l~iW~l~-~~~-~-~~~W~~~~~i~~~~~~~~--~~~~~~~~i~~~~-~~~~~~~yd~~t~~~~~v~~~ 320 (339)
.....+.+|.++ +.+ . ...- ....+.... ..| +++..+|.+++.. ....+..||++++..+.+...
T Consensus 198 ~~~~~I~~~d~~~~~Gl~~~~~~-~~~~~~~~~-~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g~~~~~i~~~ 269 (326)
T 2ghs_A 198 TKVNRLMRVPLDARTGLPTGKAE-VFIDSTGIK-GGMDGSVCDAEGHIWNARWGEGAVDRYDTDGNHIARYEVP 269 (326)
T ss_dssp TTTCEEEEEEBCTTTCCBSSCCE-EEEECTTSS-SEEEEEEECTTSCEEEEEETTTEEEEECTTCCEEEEEECS
T ss_pred CCCCEEEEEEcccccCCcccCce-EEEECCCCC-CCCCeeEECCCCCEEEEEeCCCEEEEECCCCCEEEEEECC
Confidence 556666666654 111 1 0100 112222111 233 4444567777765 345799999976666666543
No 241
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=24.48 E-value=2.8e+02 Score=22.43 Aligned_cols=17 Identities=18% Similarity=-0.029 Sum_probs=10.0
Q ss_pred EEEEEECCCceeeeecC
Q 047931 213 VLAAFDLVEERFKEFPL 229 (339)
Q Consensus 213 ~il~fD~~~~~~~~i~l 229 (339)
.+.++|...+....+..
T Consensus 236 gl~~~~~~g~~~~~~~~ 252 (330)
T 3hxj_A 236 HLYAINPDGTEKWRFKT 252 (330)
T ss_dssp EEEEECTTSCEEEEEEC
T ss_pred eEEEECCCCCEeEEeeC
Confidence 67777765555544443
No 242
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=23.96 E-value=3.4e+02 Score=23.24 Aligned_cols=109 Identities=9% Similarity=-0.027 Sum_probs=58.2
Q ss_pred CCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEE--ECCeEEEEEeCCCeEEEEEEcccCCCCCeEEE
Q 047931 198 NGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGV--LGDCLCLQFFKGKMKEHWIMKEYGVKESWTRV 275 (339)
Q Consensus 198 ~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~--~~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~ 275 (339)
+|.+||..... ...|..+|+....-..+-- .... ..-.|+. .+|+||++......| +..+-.+. ..-.
T Consensus 213 ~g~ly~td~~~--~~~I~r~~~dG~~~~~~~~-~~~~--~PnGlavd~~~~~lY~aD~~~~~I--~~~d~dG~-~~~~-- 282 (386)
T 3v65_B 213 EGTIYWTDWGN--TPRIEASSMDGSGRRIIAD-THLF--WPNGLTIDYAGRRMYWVDAKHHVI--ERANLDGS-HRKA-- 282 (386)
T ss_dssp TTEEEEEECSS--SCEEEEEETTSCSCEEEEC-SSCS--CEEEEEEEGGGTEEEEEETTTTEE--EEECTTSC-SCEE--
T ss_pred CCeEEEeccCC--CCEEEEEeCCCCCcEEEEE-CCCC--CeeeEEEeCCCCEEEEEECCCCEE--EEEeCCCC-eeEE--
Confidence 58999986442 2478899987654443321 1111 2224554 388999988766654 44443221 2111
Q ss_pred EEecCCCCeeEEEEEe-CCeEEEEE-CCcEEEEEECCCC-cEEEeE
Q 047931 276 FIHQDPNNVWPLCLWK-NSTKLLVI-NRKNLLVCDCNNE-GSEDVA 318 (339)
Q Consensus 276 ~~i~~~~~~~~~~~~~-~~~i~~~~-~~~~~~~yd~~t~-~~~~v~ 318 (339)
.+...+ ..|.++.- ++.+++.. ...++..+|..++ ..+.+.
T Consensus 283 -~~~~~~-~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 283 -VISQGL-PHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp -EECSSC-SSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred -EEECCC-CCceEEEEECCEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 122222 34655543 44566544 3457999995444 455553
No 243
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=23.96 E-value=3.9e+02 Score=23.92 Aligned_cols=158 Identities=9% Similarity=-0.014 Sum_probs=77.7
Q ss_pred eeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEEecccCCccCc-cCCCceEE--C-CeEEEEEecCCCCeEEEE
Q 047931 142 LYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRVLASGYTRPL-INVPGTLT--N-GALHWRLQKHGGDFVLAA 216 (339)
Q Consensus 142 ~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~~~~~~~-~~~~~v~~--~-G~lyw~~~~~~~~~~il~ 216 (339)
...+.+ ..+.+.++... ....+.+|+..++.- +..+...... ..-..+.+ + |.....+..+ ..|..
T Consensus 163 v~~~~~~~~~~~~l~~~~----~d~~v~vwd~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---g~i~v 233 (615)
T 1pgu_A 163 INACHLKQSRPMRSMTVG----DDGSVVFYQGPPFKF--SASDRTHHKQGSFVRDVEFSPDSGEFVITVGSD---RKISC 233 (615)
T ss_dssp EEEEEECSSSSCEEEEEE----TTTEEEEEETTTBEE--EEEECSSSCTTCCEEEEEECSTTCCEEEEEETT---CCEEE
T ss_pred EEEEEECCCCCcEEEEEe----CCCcEEEEeCCCcce--eeeecccCCCCceEEEEEECCCCCCEEEEEeCC---CeEEE
Confidence 445555 44445555433 245778888665432 2112111000 00112222 3 5544444433 47889
Q ss_pred EECCCceeee-ecCCCCCCCCceeEEEEECCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecCC---C--CeeEEEEE
Q 047931 217 FDLVEERFKE-FPLPDASTSFRFFGTGVLGDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQDP---N--NVWPLCLW 290 (339)
Q Consensus 217 fD~~~~~~~~-i~lP~~~~~~~~~~l~~~~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~---~--~~~~~~~~ 290 (339)
+|+.+.+... +.-+..........+...+|.+.+....+..+.+|.++. . ....++... . ....+.+.
T Consensus 234 wd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~----~--~~~~~~~~~~~~~~~~~~~~~~~ 307 (615)
T 1pgu_A 234 FDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTT----S--KCVQKWTLDKQQLGNQQVGVVAT 307 (615)
T ss_dssp EETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTT----T--EEEEEEECCTTCGGGCEEEEEEE
T ss_pred EECCCCCEeEEecccccccCCceEEEEEcCCCEEEEEcCCCcEEEEECCC----C--cEEEEEcCCCCcccCceeEEEeC
Confidence 9988765433 311100111112223322788877777888999999874 2 223333221 1 12222333
Q ss_pred eCCeEEEEECCcEEEEEECCCCcE
Q 047931 291 KNSTKLLVINRKNLLVCDCNNEGS 314 (339)
Q Consensus 291 ~~~~i~~~~~~~~~~~yd~~t~~~ 314 (339)
.++.++....++.+..||+++++.
T Consensus 308 ~~~~l~~~~~~g~i~~~d~~~~~~ 331 (615)
T 1pgu_A 308 GNGRIISLSLDGTLNFYELGHDEV 331 (615)
T ss_dssp ETTEEEEEETTSCEEEEETTEEEE
T ss_pred CCCeEEEEECCCCEEEEECCCCcE
Confidence 333455555666799999988553
No 244
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=23.60 E-value=4.5e+02 Score=24.48 Aligned_cols=110 Identities=5% Similarity=-0.042 Sum_probs=0.0
Q ss_pred CCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE--CCeEEEEEeCCCeEEEEEEcccC-CCCCeEE
Q 047931 198 NGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL--GDCLCLQFFKGKMKEHWIMKEYG-VKESWTR 274 (339)
Q Consensus 198 ~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~--~G~L~~v~~~~~~l~iW~l~~~~-~~~~W~~ 274 (339)
+|..--.+... ..+..+|.++ ....+. +...-......-... +|++.++...+.++.||.+++.. ..-+..+
T Consensus 96 dG~~LAs~s~d---g~V~iwd~~~-~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~ 170 (588)
T 2j04_A 96 IDDWMAVLSNN---GNVSVFKDNK-MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYF 170 (588)
T ss_dssp SSSCEEEEETT---SCEEEEETTE-EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEE
T ss_pred CCCEEEEEeCC---CcEEEEeCCc-eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCcccccccee
Q ss_pred EEEecCCC-----CeeEEEEEeCCeEEEEECCcEEEEEECCCCc
Q 047931 275 VFIHQDPN-----NVWPLCLWKNSTKLLVINRKNLLVCDCNNEG 313 (339)
Q Consensus 275 ~~~i~~~~-----~~~~~~~~~~~~i~~~~~~~~~~~yd~~t~~ 313 (339)
+.++.... .+.-+++.++| ++....+..+..||.++++
T Consensus 171 l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~ 213 (588)
T 2j04_A 171 ESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASS 213 (588)
T ss_dssp EEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSS
T ss_pred eeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCc
No 245
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=23.33 E-value=3.6e+02 Score=23.28 Aligned_cols=140 Identities=8% Similarity=-0.061 Sum_probs=71.3
Q ss_pred CcEEEEEEeCCCceEEecccCCccCccCCCceEE---CCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeE
Q 047931 164 NMSVAIFSLRMNSWRRVLASGYTRPLINVPGTLT---NGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFG 240 (339)
Q Consensus 164 ~~~~~vyss~~~~W~~~~~~~~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~ 240 (339)
...+++++.....-+.+..... ....++.+ +|.+||..... ...|..+|+....-..+.- .... ..-.
T Consensus 180 ~~~I~~~~~~g~~~~~l~~~~~----~~P~~iavdp~~g~ly~td~~~--~~~I~~~~~dG~~~~~~~~-~~l~--~P~g 250 (400)
T 3p5b_L 180 LGTVSVADTKGVKRKTLFRENG----SKPRAIVVDPVHGFMYWTDWGT--PAKIKKGGLNGVDIYSLVT-ENIQ--WPNG 250 (400)
T ss_dssp TTEEEEECTTTCSEEEEEECSS----CCEEEEEEETTTTEEEEEECSS--SCCEEEEETTSCSCEEEEC-SSCS--CEEE
T ss_pred CCeEEEEeCCCCceEEEEeCCC----CCcceEEEecccCeEEEEeCCC--CCEEEEEeCCCCccEEEEE-CCCC--ceEE
Confidence 4467777776555444421111 11123433 68999986432 2368888887654433311 1111 2234
Q ss_pred EEEE--CCeEEEEEeCCCeEEEEEEcccCCCCCeEEEEEecCCCCeeEEEEEeC-CeEEEEEC-CcEEEEEECCCCc-EE
Q 047931 241 TGVL--GDCLCLQFFKGKMKEHWIMKEYGVKESWTRVFIHQDPNNVWPLCLWKN-STKLLVIN-RKNLLVCDCNNEG-SE 315 (339)
Q Consensus 241 l~~~--~G~L~~v~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~-~~i~~~~~-~~~~~~yd~~t~~-~~ 315 (339)
|+.. +|+||++......| |..+-.+ ....... .....+ ..|.++.-+ +.+++.-. ..++..+|..+++ .+
T Consensus 251 lavd~~~~~lY~aD~~~~~I--~~~d~dG-~~~~~~~-~~~~~l-~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~~~~ 325 (400)
T 3p5b_L 251 ITLDLLSGRLYWVDSKLHSI--SSIDVNG-GNRKTIL-EDEKRL-AHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVN 325 (400)
T ss_dssp EEEETTTTEEEEEETTTTEE--EEEETTS-CCCEEEE-ECSSTT-SSEEEEEEETTEEEEEESSSCSEEEEESSSCCCCE
T ss_pred EEEEeCCCEEEEEECCCCEE--EEEeCCC-CccEEEE-eCCCCC-CCCEEEEEeCCEEEEecCCCCeEEEEEcCCCCceE
Confidence 5544 78999987765554 4444322 2222221 111123 456666543 34555443 3459999966554 44
Q ss_pred Ee
Q 047931 316 DV 317 (339)
Q Consensus 316 ~v 317 (339)
.+
T Consensus 326 ~i 327 (400)
T 3p5b_L 326 LL 327 (400)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 246
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=23.28 E-value=3.5e+02 Score=23.08 Aligned_cols=100 Identities=10% Similarity=0.044 Sum_probs=53.1
Q ss_pred CeEEEEEECC---C-ceeeeecCCCCCC--------CCc-eeEEEE-ECCeEEEEEeCC-CeEEEEEEcccCCC-CCeEE
Q 047931 211 DFVLAAFDLV---E-ERFKEFPLPDAST--------SFR-FFGTGV-LGDCLCLQFFKG-KMKEHWIMKEYGVK-ESWTR 274 (339)
Q Consensus 211 ~~~il~fD~~---~-~~~~~i~lP~~~~--------~~~-~~~l~~-~~G~L~~v~~~~-~~l~iW~l~~~~~~-~~W~~ 274 (339)
...+++||+. + +.-..+.|+.... ... .-.+++ -+|..|+..... . .||.....|.. ..|-+
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~--~I~rV~pdG~~~~~~~~ 176 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMP--AIARVSADGKTVSTFAW 176 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSC--EEEEECTTSCCEEEEEE
T ss_pred CCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCC--eEEEEeCCCCEEeeeee
Confidence 4689999998 4 3344456542110 000 112222 378888866632 2 26777654421 22432
Q ss_pred EEEecC-CCCeeEEEEEeCCeEEEEE-CCcEEEEEECCCC
Q 047931 275 VFIHQD-PNNVWPLCLWKNSTKLLVI-NRKNLLVCDCNNE 312 (339)
Q Consensus 275 ~~~i~~-~~~~~~~~~~~~~~i~~~~-~~~~~~~yd~~t~ 312 (339)
...... ..|..=+++.++|.+++.. ...+++.+|+++.
T Consensus 177 ~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 177 ESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp CCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred cCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 111111 1245566778788766655 4456999999854
No 247
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=22.66 E-value=3.6e+02 Score=23.07 Aligned_cols=140 Identities=7% Similarity=-0.068 Sum_probs=67.9
Q ss_pred CceEEEccCCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEeeeCCceEEEEEeeEeCCCcEEEEEEeCCCceEEec
Q 047931 102 NGLVCTTPKPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGCTAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRVL 181 (339)
Q Consensus 102 ~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~ 181 (339)
.+.+++.. ...+...++-+++...+-..... ..|+.+...+=++.... .....+..++..+...+.+.
T Consensus 87 ~~~l~~~~-~~~I~~i~~~~~~~~~~~~~~~~--------~~gl~~d~~~~~ly~~D---~~~~~I~r~~~~g~~~~~~~ 154 (386)
T 3v65_B 87 EPVLLFAN-RIDIRQVLPHRSEYTLLLNNLEN--------AIALDFHHRRELVFWSD---VTLDRILRANLNGSNVEEVV 154 (386)
T ss_dssp CCEEEEEC-BSCEEEECTTSCCCEEEECSCSC--------EEEEEEETTTTEEEEEE---TTTTEEEEEETTSCCEEEEE
T ss_pred cceeEeec-CccceeeccCCCcEEEEecCCCc--------cEEEEEecCCCeEEEEe---CCCCcEEEEecCCCCcEEEE
Confidence 34444443 34566666665554433221111 45566522222333322 12445666776666555442
Q ss_pred ccCCccCccCCCceE---ECCeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE--CCeEEEEEeCC-
Q 047931 182 ASGYTRPLINVPGTL---TNGALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL--GDCLCLQFFKG- 255 (339)
Q Consensus 182 ~~~~~~~~~~~~~v~---~~G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~--~G~L~~v~~~~- 255 (339)
..... ...++. .+|.+||..... ..|..+|+.......+. ..... ....+++. +|.||+.....
T Consensus 155 ~~~~~----~p~glavd~~~g~lY~~d~~~---~~I~~~~~dg~~~~~l~-~~~l~--~P~giavdp~~g~ly~td~~~~ 224 (386)
T 3v65_B 155 STGLE----SPGGLAVDWVHDKLYWTDSGT---SRIEVANLDGAHRKVLL-WQSLE--KPRAIALHPMEGTIYWTDWGNT 224 (386)
T ss_dssp CSSCS----CCCCEEEETTTTEEEEEETTT---TEEEECBTTSCSCEEEE-CSSCS--CEEEEEEETTTTEEEEEECSSS
T ss_pred eCCCC----CccEEEEEeCCCeEEEEcCCC---CeEEEEeCCCCceEEee-cCCCC--CCcEEEEEcCCCeEEEeccCCC
Confidence 11111 112333 368999987654 47888888765433331 11211 12234444 78888876643
Q ss_pred CeEEEEEEcc
Q 047931 256 KMKEHWIMKE 265 (339)
Q Consensus 256 ~~l~iW~l~~ 265 (339)
.. |+..+-
T Consensus 225 ~~--I~r~~~ 232 (386)
T 3v65_B 225 PR--IEASSM 232 (386)
T ss_dssp CE--EEEEET
T ss_pred CE--EEEEeC
Confidence 44 445543
No 248
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=22.19 E-value=3.2e+02 Score=22.24 Aligned_cols=194 Identities=7% Similarity=-0.042 Sum_probs=93.5
Q ss_pred CceEEEcc-CCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEE
Q 047931 102 NGLVCTTP-KPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRR 179 (339)
Q Consensus 102 ~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~ 179 (339)
+|-+.+.+ ...+++.++|.++....++... . ..++.+ ..+.. +++- ...+...+..|+..++..+.
T Consensus 42 ~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~-~--------p~gia~~~dG~l-~vad--~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 42 DGTIFVTNHEVGEIVSITPDGNQQIHATVEG-K--------VSGLAFTSNGDL-VATG--WNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp TSCEEEEETTTTEEEEECTTCCEEEEEECSS-E--------EEEEEECTTSCE-EEEE--ECTTSCEEEEEECTTSCEEE
T ss_pred CCCEEEEeCCCCeEEEECCCCceEEEEeCCC-C--------ceeEEEcCCCcE-EEEe--ccCCcceEEEEcCCCCeEEE
Confidence 56555544 4568888998876443332211 1 345555 33332 2221 11223356667777887766
Q ss_pred ecccCCccCccCCCceEECCeEEEEEecCCCCeEEEEEECCCceeeee--c------CCCCCCCCceeEEEEECCeEEEE
Q 047931 180 VLASGYTRPLINVPGTLTNGALHWRLQKHGGDFVLAAFDLVEERFKEF--P------LPDASTSFRFFGTGVLGDCLCLQ 251 (339)
Q Consensus 180 ~~~~~~~~~~~~~~~v~~~G~lyw~~~~~~~~~~il~fD~~~~~~~~i--~------lP~~~~~~~~~~l~~~~G~L~~v 251 (339)
+...+... ......+..+|.+|..... ...|..+|..+.+.+.. . .+... ....-.+..-++.||+.
T Consensus 110 ~~~~~~~~-~~~g~~~~~~~~~~v~d~~---~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~-~~~pngis~dg~~lyv~ 184 (306)
T 2p4o_A 110 LLTLPDAI-FLNGITPLSDTQYLTADSY---RGAIWLIDVVQPSGSIWLEHPMLARSNSESV-FPAANGLKRFGNFLYVS 184 (306)
T ss_dssp EEECTTCS-CEEEEEESSSSEEEEEETT---TTEEEEEETTTTEEEEEEECGGGSCSSTTCC-SCSEEEEEEETTEEEEE
T ss_pred EEeCCCcc-ccCcccccCCCcEEEEECC---CCeEEEEeCCCCcEeEEEECCccccccccCC-CCcCCCcCcCCCEEEEE
Confidence 64433211 0001011223445543322 24788899876432221 0 11111 00112243335578887
Q ss_pred EeCCCeEEEEEEcccCCCCCeEEEEEecCCCCeeEEEEEeCCeEEEEEC-CcEEEEEECCCCcEEE
Q 047931 252 FFKGKMKEHWIMKEYGVKESWTRVFIHQDPNNVWPLCLWKNSTKLLVIN-RKNLLVCDCNNEGSED 316 (339)
Q Consensus 252 ~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~i~~~~~-~~~~~~yd~~t~~~~~ 316 (339)
.....++.++.++..+.-........... -.-+++..+|.+++... ..++..||++ ++...
T Consensus 185 d~~~~~I~~~~~~~~g~~~~~~~~~~~~~---P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~ 246 (306)
T 2p4o_A 185 NTEKMLLLRIPVDSTDKPGEPEIFVEQTN---IDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTI 246 (306)
T ss_dssp ETTTTEEEEEEBCTTSCBCCCEEEEESCC---CSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEE
T ss_pred eCCCCEEEEEEeCCCCCCCccEEEeccCC---CCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEE
Confidence 77777776666653221111121122211 23366777787766543 4469999987 44443
No 249
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=21.45 E-value=3.8e+02 Score=22.87 Aligned_cols=138 Identities=9% Similarity=0.037 Sum_probs=66.9
Q ss_pred EEEccCCCEEEEEcccccceeecCCCCCCCCCCCCCCeeEEee-eCCceEEEEEeeEeCCCcEEEEEEeCCCceEEeccc
Q 047931 105 VCTTPKPKIFFVLNPLTRESKRIPDVPFEPFPRSSDDLYGFGC-TAEDCKFIKVSFGLKPNMSVAIFSLRMNSWRRVLAS 183 (339)
Q Consensus 105 l~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-~~~~ykvv~~~~~~~~~~~~~vyss~~~~W~~~~~~ 183 (339)
+.....++.+.|+|..|++....-..+.. ....+.+ .++.+-+.+- ....+.+|+..++.- +..+
T Consensus 123 l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~-------~V~~v~~~~~~~~l~sgs-----~D~~i~iwd~~~~~~--~~~~ 188 (410)
T 1vyh_C 123 MVSASEDATIKVWDYETGDFERTLKGHTD-------SVQDISFDHSGKLLASCS-----ADMTIKLWDFQGFEC--IRTM 188 (410)
T ss_dssp EEEEESSSCEEEEETTTCCCCEEECCCSS-------CEEEEEECTTSSEEEEEE-----TTSCCCEEETTSSCE--EECC
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEeccCC-------cEEEEEEcCCCCEEEEEe-----CCCeEEEEeCCCCce--eEEE
Confidence 33333567899999988765322111111 1445555 3344332222 134566777655432 2111
Q ss_pred CCccCccCCCceEE--CCeEEEEEecCCCCeEEEEEECCCceee-eecCCCCCCCCceeEEEEE-CCeEEEEEeCCCeEE
Q 047931 184 GYTRPLINVPGTLT--NGALHWRLQKHGGDFVLAAFDLVEERFK-EFPLPDASTSFRFFGTGVL-GDCLCLQFFKGKMKE 259 (339)
Q Consensus 184 ~~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~il~fD~~~~~~~-~i~lP~~~~~~~~~~l~~~-~G~L~~v~~~~~~l~ 259 (339)
.... ..-.++.+ +|.....+.. ...|..+|+.+.+.. .+..... ....+... +|.+.+....+..+.
T Consensus 189 ~~h~--~~V~~v~~~p~~~~l~s~s~---D~~i~~wd~~~~~~~~~~~~h~~----~v~~~~~~~~g~~l~s~s~D~~v~ 259 (410)
T 1vyh_C 189 HGHD--HNVSSVSIMPNGDHIVSASR---DKTIKMWEVQTGYCVKTFTGHRE----WVRMVRPNQDGTLIASCSNDQTVR 259 (410)
T ss_dssp CCCS--SCEEEEEECSSSSEEEEEET---TSEEEEEETTTCCEEEEEECCSS----CEEEEEECTTSSEEEEEETTSCEE
T ss_pred cCCC--CCEEEEEEeCCCCEEEEEeC---CCeEEEEECCCCcEEEEEeCCCc----cEEEEEECCCCCEEEEEcCCCeEE
Confidence 1110 00111222 3443333333 257888999876532 2221111 11222222 777777777888999
Q ss_pred EEEEcc
Q 047931 260 HWIMKE 265 (339)
Q Consensus 260 iW~l~~ 265 (339)
+|.+..
T Consensus 260 vwd~~~ 265 (410)
T 1vyh_C 260 VWVVAT 265 (410)
T ss_dssp EEETTT
T ss_pred EEECCC
Confidence 998864
No 250
>3kvp_A Uncharacterized protein YMZC; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.40A {Bacillus subtilis}
Probab=21.11 E-value=92 Score=19.56 Aligned_cols=15 Identities=0% Similarity=-0.082 Sum_probs=13.3
Q ss_pred EEEEEECCCCcEEEe
Q 047931 303 NLLVCDCNNEGSEDV 317 (339)
Q Consensus 303 ~~~~yd~~t~~~~~v 317 (339)
++|.||.++++++-+
T Consensus 41 KIykyde~tNeI~Lk 55 (72)
T 3kvp_A 41 KIYEYNESRNEVKLK 55 (72)
T ss_dssp EEEEEETTTTEEEEE
T ss_pred EEEEeCCCCCeEEEE
Confidence 699999999998765
No 251
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=20.74 E-value=4.3e+02 Score=23.16 Aligned_cols=112 Identities=7% Similarity=0.007 Sum_probs=61.0
Q ss_pred CCceEEC-----CeEEEEEecCCCCeEEEEEECCCceeeeecCCCCCCCCceeEEEEE-CCeEEEEEeC--CCeEEEEEE
Q 047931 192 VPGTLTN-----GALHWRLQKHGGDFVLAAFDLVEERFKEFPLPDASTSFRFFGTGVL-GDCLCLQFFK--GKMKEHWIM 263 (339)
Q Consensus 192 ~~~v~~~-----G~lyw~~~~~~~~~~il~fD~~~~~~~~i~lP~~~~~~~~~~l~~~-~G~L~~v~~~--~~~l~iW~l 263 (339)
..++.++ |.|||..... .|..+|+++.+...+..+.. ....++.. +|.|+++... ...-.+..+
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~----~I~~id~~~g~v~~~~~~~~----~P~giavd~dG~lyVad~~~~~~~~gv~~~ 212 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRD----AFRHVDFVNQYVDIKTTNIG----QCADVNFTLNGDMVVVDDQSSDTNTGIYLF 212 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTS----CEEEEETTTTEEEEECCCCS----CEEEEEECTTCCEEEEECCSCTTSEEEEEE
T ss_pred CceEEEccccCCCEEEEEeCCC----CEEEEECCCCEEEEeecCCC----CccEEEECCCCCEEEEcCCCCcccceEEEE
Confidence 3467776 8999876543 79999998888877643211 12334444 7778877752 112223333
Q ss_pred cccCCCCCeEEEEEecCCCCeeEEEEEe-CCeEEEEEC-CcEEEEEECCCCcE
Q 047931 264 KEYGVKESWTRVFIHQDPNNVWPLCLWK-NSTKLLVIN-RKNLLVCDCNNEGS 314 (339)
Q Consensus 264 ~~~~~~~~W~~~~~i~~~~~~~~~~~~~-~~~i~~~~~-~~~~~~yd~~t~~~ 314 (339)
... ..|.....+..-....-+++.+ +|.+++... ..+++.+|+++++.
T Consensus 213 ~~~---~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 213 TRA---SGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL 262 (433)
T ss_dssp CGG---GTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCE
T ss_pred ECC---CCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE
Confidence 322 1222111121100112245565 566666543 34699999987776
Done!