BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047932
(598 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 353 bits (907), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 186/475 (39%), Positives = 285/475 (60%), Gaps = 14/475 (2%)
Query: 58 ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYT----- 112
AL + M+++ P V+ ++L G N+ D V SL ++ G PD +T
Sbjct: 135 ALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV-SLVGQMVEMGYQPDSFTFNTLI 193
Query: 113 HSILINCRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE 172
H + + R EA AL ++ V GC+PD+ TY ++NGLC+ G +AL+L ++M G E
Sbjct: 194 HGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIE 253
Query: 173 FGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDW 232
P V YNTIID +C V+ A+ LF +M ++ I PNVVTYNSLI C + W
Sbjct: 254 ------PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 307
Query: 233 NEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTL 292
++A RL M+++ ++PNVVTFS ++D K GK+ EA +L D MI+ + P+ F Y++L
Sbjct: 308 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 367
Query: 293 MDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGI 352
++GFC+ R++ AK +F M S C +VV+Y TLI G+CK K V+E + L+R+M +G+
Sbjct: 368 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL 427
Query: 353 RPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALE 412
VTY+TL G F+ + ++A +F +M + V D Y+ +DGLC NG V AL
Sbjct: 428 VGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALV 487
Query: 413 LFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLC 472
+F + SK E DI +Y+ +I+G+CK GK+E W+LF SLS G+ PNVVTY M+ G C
Sbjct: 488 VFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 547
Query: 473 NDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKSSRGKLMSQMSSC 527
G ++A LF +M+ +G PD +NT++ +R+ + K++ +L+ +M SC
Sbjct: 548 RKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGD--KAASAELIREMRSC 600
Score = 196 bits (497), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 196/374 (52%), Gaps = 6/374 (1%)
Query: 138 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFV 197
P + ++ L++ + + + ++L E+M N G+ + TY+ +I+ C+ +
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQN----LGI--SHNLYTYSILINCFCRRSQL 132
Query: 198 DKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVI 257
A+ + +M P++VT NSL++ F H + ++A L +M++ G P+ TF+ +
Sbjct: 133 SLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTL 192
Query: 258 VDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGC 317
+ L ++ + EA L+D M+ G P+ Y +++G C G ++ A L ME
Sbjct: 193 IHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKI 252
Query: 318 MHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALK 377
VV Y T+I+ C KNV +ALNL+ +M KGIRP VVTY++L L + A +
Sbjct: 253 EPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 312
Query: 378 LFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLC 437
L +M + + ++ ID K G ++EA +L+ + + DI +YS LI+G C
Sbjct: 313 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 372
Query: 438 KIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCV 497
+L+ A +F+ + PNVVTYN +I G C ++D+ +LF +M +G+ + V
Sbjct: 373 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV 432
Query: 498 IFNTIMLGFIRNNE 511
+ T++ GF + E
Sbjct: 433 TYTTLIHGFFQARE 446
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 163/310 (52%)
Query: 197 VDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSV 256
+D A+ LF M P++V ++ L+ + + ++ L +M + G+ N+ T+S+
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 257 IVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNG 316
+++ C+ ++ A +L M+++G P+ N+L++GFC R++ A L M G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 317 CMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHAL 376
D ++ TLI+G + EA+ L +M+ KG +P +VTY + GL + ++ AL
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 377 KLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGL 436
L +M+ + IYNT ID LC V +AL LF + N ++++Y+ LI L
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 437 CKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDC 496
C G+ A L + + PNVVT++ +I +G++ +A L+ +M + ++PD
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 497 VIFNTIMLGF 506
+++++ GF
Sbjct: 362 FTYSSLINGF 371
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 134/259 (51%), Gaps = 2/259 (0%)
Query: 266 KMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYT 325
K+++A L M++ P+ ++ L+ + + L M++ G H++ +Y+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 326 TLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHN 385
LIN +C+ + AL + KM+ G P +VT ++L G +++ A+ L +M
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 386 DVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETA 445
D++ +NT I GL ++ EA+ L + + D+++Y +++GLCK G ++ A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 446 WELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLG 505
L + + + + P VV YN +I LCN ++ A +LF +M+ KG+ P+ V +N+++
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 506 FIRNNETSKSSRGKLMSQM 524
S +SR L+S M
Sbjct: 301 LCNYGRWSDASR--LLSDM 317
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 352 bits (902), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 189/530 (35%), Positives = 295/530 (55%), Gaps = 53/530 (10%)
Query: 38 LKERSKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSL 97
+ER +S I I ++A+ +F M+R P P V F+ F +A+ K ++ VL
Sbjct: 56 FRERLRSG----IVDIKKDDAIALFQEMIRSRPLPSLVD-FSRFFSAIARTKQFNLVLDF 110
Query: 98 FKRLNSTGLFPDLYTHSILINC-------------------------------------- 119
K+L G+ ++YT +I+INC
Sbjct: 111 CKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFL 170
Query: 120 --RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 177
++ EA L ++ GC+PDV TYN+++NG+CR+G T +AL+L +M N
Sbjct: 171 EGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN------V 224
Query: 178 KPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKR 237
K D TY+TIID +C++G +D A+ LF +M+ + I +VVTYNSL+ A WN+
Sbjct: 225 KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL 284
Query: 238 LFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFC 297
L M+ + + PNV+TF+V++D K GK++EA+ L MI G+ PN YNTLMDG+C
Sbjct: 285 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344
Query: 298 LTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVV 357
+ R++ A + M N C D+V++T+LI GYC K V++ + ++R + +G+ V
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404
Query: 358 TYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAI 417
TYS L G + +++ A +LF EM + V D Y +DGLC NG + +ALE+F +
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Query: 418 GNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQM 477
SK +L I+ Y+ +I+G+CK GK+E AW LF SL G+ PNV+TY +MI GLC G +
Sbjct: 465 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 524
Query: 478 DKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKSSRGKLMSQMSSC 527
+A+ L ME G P+ +NT++ +R+ + + S+ KL+ +M SC
Sbjct: 525 SEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASA--KLIEEMKSC 572
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 351 bits (900), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 182/475 (38%), Positives = 284/475 (59%), Gaps = 14/475 (2%)
Query: 58 ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYT----- 112
AL I M+++ P V+ ++L G N+ + V +L ++ G PD T
Sbjct: 119 ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV-ALVDQMVEMGYQPDTVTFTTLV 177
Query: 113 HSILINCRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE 172
H + + + EA AL ++ V GC+PD+ TY +INGLC+ G +ALNL +M G E
Sbjct: 178 HGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE 237
Query: 173 FGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDW 232
D V Y+T+ID +CK VD A+ LF +M ++ I P+V TY+SLI C + W
Sbjct: 238 ------ADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 291
Query: 233 NEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTL 292
++A RL M+++ ++PNVVTF+ ++D K GK+ EA +L D MIQ + PN YN+L
Sbjct: 292 SDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL 351
Query: 293 MDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGI 352
++GFC+ R++ A+++F M S C+ DVV+Y TLING+CK K V + + L+R M +G+
Sbjct: 352 INGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGL 411
Query: 353 RPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALE 412
VTY+TL G F+ ++A +F +M + V + YNT +DGLCKNG + +A+
Sbjct: 412 VGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMV 471
Query: 413 LFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLC 472
+F + SK E DI +Y+ + +G+CK GK+E W+LF SLS G+ P+V+ YN MI G C
Sbjct: 472 VFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFC 531
Query: 473 NDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKSSRGKLMSQMSSC 527
G ++A+ LF+ M+ G PD +NT++ +R+ + K++ +L+ +M SC
Sbjct: 532 KKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGD--KAASAELIKEMRSC 584
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/459 (29%), Positives = 226/459 (49%), Gaps = 36/459 (7%)
Query: 56 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSI 115
+EA+ + D M+ M P V+ ++ G NK + V +L +R+ G PDL T+
Sbjct: 152 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV-ALVERMVVKGCQPDLVTYGA 210
Query: 116 LIN--CRIME---AAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 170
+IN C+ E A L K+ E DV Y+T+I+ LC+ H ALNLF EM N
Sbjct: 211 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG 270
Query: 171 ------------------GEFGVVCK-----------PDTVTYNTIIDGVCKEGFVDKAM 201
G + + P+ VT+N++ID KEG + +A
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330
Query: 202 ELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDEL 261
+LF +M +I+PN+VTYNSLI+ F D +EA+++F M+ + P+VVT++ +++
Sbjct: 331 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGF 390
Query: 262 CKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDV 321
CK K+ + L M + G+ NT Y TL+ GF ++A+ +F M S+G ++
Sbjct: 391 CKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNI 450
Query: 322 VSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDE 381
++Y TL++G CK +E+A+ ++ + + P + TY+ + G+ + +VE LF
Sbjct: 451 MTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCS 510
Query: 382 MQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGK 441
+ V D YNT I G CK G EA LF + D +Y+ LI + G
Sbjct: 511 LSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGD 570
Query: 442 LETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKA 480
+ EL + + + TY ++ + +DG++DK
Sbjct: 571 KAASAELIKEMRSCRFAGDASTYG-LVTDMLHDGRLDKG 608
Score = 201 bits (511), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/451 (29%), Positives = 224/451 (49%), Gaps = 45/451 (9%)
Query: 104 TGLFPDLY----THSILINCRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVA 159
+GL D Y + + L++ ++ EA LF ++ P + ++ L++ + + +
Sbjct: 25 SGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLV 84
Query: 160 LNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTY 219
++ E+M GV + TYN +I+ +C+ + A+ + +M P++VT
Sbjct: 85 ISFGEKME----ILGV--SHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTL 138
Query: 220 NSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQ 279
NSL++ F H + +EA L +M++ G P+ VTF+ +V L ++ K EA L++ M+
Sbjct: 139 NSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV 198
Query: 280 IGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEE 339
G P+ Y +++G C G + A L ME DVV Y+T+I+ CK ++V++
Sbjct: 199 KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDD 258
Query: 340 ALNLYRKMLPKGIRPTVVTYSTL-------------------------------FLGLFE 368
ALNL+ +M KGIRP V TYS+L F L +
Sbjct: 259 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLID 318
Query: 369 VHQVEHAL----KLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYEL 424
E L KLFDEM + + YN+ I+G C + + EA ++F + +
Sbjct: 319 AFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP 378
Query: 425 DIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLF 484
D+++Y+ LI+G CK K+ ELF+ +SR GL+ N VTY +IHG D A +F
Sbjct: 379 DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVF 438
Query: 485 LDMEAKGVEPDCVIFNTIMLGFIRNNETSKS 515
M + GV P+ + +NT++ G +N + K+
Sbjct: 439 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 469
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 175/321 (54%)
Query: 197 VDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSV 256
+D+A++LF +M P++V ++ L+ + ++ KM GV N+ T+++
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 257 IVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNG 316
+++ LC+ ++ A +L M+++G P+ N+L++GFC R++ A L M G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 317 CMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHAL 376
D V++TTL++G + EA+ L +M+ KG +P +VTY + GL + + + AL
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 377 KLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGL 436
L ++M+ + AD IY+T ID LCK V +AL LF + N D+ +YS LI L
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 437 CKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDC 496
C G+ A L + + PNVVT+N +I +G++ +A LF +M + ++P+
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 497 VIFNTIMLGFIRNNETSKSSR 517
V +N+++ GF ++ ++ +
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQ 366
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 346 bits (888), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 179/467 (38%), Positives = 280/467 (59%), Gaps = 16/467 (3%)
Query: 38 LKERSKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSL 97
L+ER + DI L N+A+ +F M++ P P V FN L + K K YD V+SL
Sbjct: 52 LRERLSKTRLRDIKL---NDAIDLFSDMVKSRPFPSIVD-FNRLLSAIVKLKKYDVVISL 107
Query: 98 FKRLNSTGLFPDLYTHSILINC-----RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCR 152
K++ G+ DLYT +I+INC ++ A ++ K+ G EPD T +L+NG CR
Sbjct: 108 GKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCR 167
Query: 153 TGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENI 212
A++L ++M E G KPD V YN IID +CK V+ A + F +++ + I
Sbjct: 168 RNRVSDAVSLVDKMV----EIGY--KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGI 221
Query: 213 NPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASR 272
PNVVTY +L++ ++ W++A RL M+ + + PNV+T+S ++D KNGK+ EA
Sbjct: 222 RPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKE 281
Query: 273 LLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYC 332
L + M+++ + P+ Y++L++G CL R++ A ++F M S GC+ DVVSY TLING+C
Sbjct: 282 LFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFC 341
Query: 333 KTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTY 392
K K VE+ + L+R+M +G+ VTY+TL G F+ V+ A + F +M ++ D +
Sbjct: 342 KAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIW 401
Query: 393 IYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSL 452
YN + GLC NG + +AL +F + + +LDI++Y+ +I G+CK GK+E AW LF SL
Sbjct: 402 TYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL 461
Query: 453 SRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGV-EPDCVI 498
S GL P++VTY M+ GLC G + + L+ M+ +G+ + DC +
Sbjct: 462 SLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL 508
Score = 207 bits (528), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 188/357 (52%), Gaps = 6/357 (1%)
Query: 159 ALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVT 218
A++LF +M P V +N ++ + K D + L +M+ I ++ T
Sbjct: 69 AIDLFSDMVKSRPF------PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYT 122
Query: 219 YNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMI 278
+N +I+CF + A + KM+ G P+ VT +V+ C+ ++ +A L+D M+
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 279 QIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVE 338
+IG P+ YN ++D C T RVN A + F +E G +VV+YT L+NG C +
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 339 EALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFI 398
+A L M+ K I P V+TYS L + +V A +LF+EM + D Y++ I
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 399 DGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLL 458
+GLC + + EA ++F + + D++SY+ LI+G CK ++E +LF+ +S+ GL+
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 459 PNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKS 515
N VTYN +I G G +DKA + F M+ G+ PD +N ++ G N E K+
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKA 419
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 169/339 (49%), Gaps = 35/339 (10%)
Query: 56 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSI 115
++A+ + D M+ + P V+ +N + L K K + FK + G+ P++ T++
Sbjct: 172 SDAVSLVDKMVEIGYKPDIVA-YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTA 230
Query: 116 LIN-----CRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMA--- 167
L+N R +AA L + + P+V TY+ L++ + G + A LFEEM
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS 290
Query: 168 ------------NG----------NGEFGVV----CKPDTVTYNTIIDGVCKEGFVDKAM 201
NG N F ++ C D V+YNT+I+G CK V+ M
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 350
Query: 202 ELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDEL 261
+LF +M + N VTYN+LI F A D ++A+ F +M G+ P++ T+++++ L
Sbjct: 351 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 410
Query: 262 CKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDV 321
C NG++E+A + + M + + + Y T++ G C TG+V A LF S+ G D+
Sbjct: 411 CDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDI 470
Query: 322 VSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYS 360
V+YTT+++G C + E LY KM +G+ T S
Sbjct: 471 VTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 346 bits (887), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 179/475 (37%), Positives = 282/475 (59%), Gaps = 14/475 (2%)
Query: 58 ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYT----- 112
AL + M+++ P V+ ++L G + D V +L ++ G PD +T
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV-ALVDQMVEMGYKPDTFTFTTLI 195
Query: 113 HSILINCRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE 172
H + ++ + EA AL ++ GC+PD+ TY T++NGLC+ G +AL+L ++M G E
Sbjct: 196 HGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 255
Query: 173 FGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDW 232
D V YNTIIDG+CK +D A+ LF +M ++ I P+V TY+SLI C + W
Sbjct: 256 ------ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 309
Query: 233 NEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTL 292
++A RL M+++ ++PNVVTFS ++D K GK+ EA +L D MI+ + P+ F Y++L
Sbjct: 310 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 369
Query: 293 MDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGI 352
++GFC+ R++ AK +F M S C +VV+Y+TLI G+CK K VEE + L+R+M +G+
Sbjct: 370 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGL 429
Query: 353 RPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALE 412
VTY+TL G F+ ++A +F +M V + YN +DGLCKNG + +A+
Sbjct: 430 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMV 489
Query: 413 LFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLC 472
+F + S E DI +Y+ +I+G+CK GK+E WELF +LS G+ PNV+ YN MI G C
Sbjct: 490 VFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFC 549
Query: 473 NDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKSSRGKLMSQMSSC 527
G ++A L M+ G P+ +NT++ +R+ + S+ +L+ +M SC
Sbjct: 550 RKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASA--ELIKEMRSC 602
Score = 198 bits (504), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 134/483 (27%), Positives = 234/483 (48%), Gaps = 56/483 (11%)
Query: 71 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINCRIMEAAALF-- 128
+PP V SF L G + + + ++G + ++ + + ++ +A LF
Sbjct: 23 NPPTVPSFFNLCGSGCWERSFAS---------ASGDYREILRNRLSDIIKVDDAVDLFGD 73
Query: 129 -TKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTI 187
K R F P + +N L++ + + + ++L E+M G+ D TY+
Sbjct: 74 MVKSRPF---PSIVEFNKLLSAVAKMNKFELVISLGEQMQT----LGI--SHDLYTYSIF 124
Query: 188 IDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGV 247
I+ C+ + A+ + +M P++VT +SL++ + H+ ++A L +M++ G
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 248 HPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKE 307
P+ TF+ ++ L + K EA L+D M+Q G P+ Y T+++G C G ++ A
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 308 LFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTL----- 362
L ME DVV Y T+I+G CK K++++ALNL+ +M KGIRP V TYS+L
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304
Query: 363 --------------------------FLGLFEVHQVEHAL----KLFDEMQHNDVAADTY 392
F L + E L KL+DEM + D +
Sbjct: 305 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 364
Query: 393 IYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSL 452
Y++ I+G C + + EA +F + + ++++YS LI G CK ++E ELF+ +
Sbjct: 365 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM 424
Query: 453 SRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNET 512
S+ GL+ N VTY +IHG D A +F M + GV P+ + +N ++ G +N +
Sbjct: 425 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 484
Query: 513 SKS 515
+K+
Sbjct: 485 AKA 487
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 146/313 (46%), Gaps = 25/313 (7%)
Query: 235 AKRLFIKMMDQGVH--PNVVTF---------------------SVIVDELCKNGKMEEAS 271
AKRLF+ QG+ P V +F ++ + L K+++A
Sbjct: 9 AKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAV 68
Query: 272 RLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGY 331
L M++ P+ +N L+ + L M++ G HD+ +Y+ IN +
Sbjct: 69 DLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCF 128
Query: 332 CKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADT 391
C+ + AL + KM+ G P +VT S+L G ++ A+ L D+M DT
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188
Query: 392 YIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQS 451
+ + T I GL + EA+ L + + D+++Y +++GLCK G ++ A L +
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKK 248
Query: 452 LSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNE 511
+ + + +VV YN +I GLC MD A +LF +M+ KG+ PD +++++
Sbjct: 249 MEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 308
Query: 512 TSKSSRGKLMSQM 524
S +SR L+S M
Sbjct: 309 WSDASR--LLSDM 319
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 129/291 (44%), Gaps = 34/291 (11%)
Query: 73 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINC-----RIMEAAAL 127
P V +F+ L K L+ + + PD++T+S LIN R+ EA +
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 385
Query: 128 FTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMAN----GN---------GEF- 173
F + C P+V TY+TLI G C+ + LF EM+ GN G F
Sbjct: 386 FELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 445
Query: 174 ---------------GVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVT 218
V P+ +TYN ++DG+CK G + KAM +F ++ + P++ T
Sbjct: 446 ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYT 505
Query: 219 YNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMI 278
YN +I A + LF + +GV PNV+ ++ ++ C+ G EEA LL M
Sbjct: 506 YNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMK 565
Query: 279 QIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLIN 329
+ G PN+ YNTL+ G + EL M S G D + + N
Sbjct: 566 EDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 616
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 101/191 (52%), Gaps = 14/191 (7%)
Query: 92 DTVLSLFKRLNSTGLFPDLYTHSILI-----NCRIMEAAALFTKLRVFGCEPDVFTYNTL 146
D +FK++ S G+ P++ T++IL+ N ++ +A +F L+ EPD++TYN +
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509
Query: 147 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQ 206
I G+C+ G LF ++ GV P+ + YNT+I G C++G ++A L +
Sbjct: 510 IEGMCKAGKVEDGWELFCNLSLK----GV--SPNVIAYNTMISGFCRKGSKEEADSLLKK 563
Query: 207 MKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGK 266
MK++ PN TYN+LI D + L +M G + T ++ + L +G+
Sbjct: 564 MKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGR 622
Query: 267 MEEASRLLDLM 277
++++ LD++
Sbjct: 623 LDKS--FLDML 631
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 346 bits (887), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 180/475 (37%), Positives = 281/475 (59%), Gaps = 14/475 (2%)
Query: 58 ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYT----- 112
AL + M+++ P V+ ++L G K ++L ++ P+ T
Sbjct: 134 ALAVLGKMMKLGYEPDIVTLSSLLNG-YCHGKRISEAVALVDQMFVMEYQPNTVTFNTLI 192
Query: 113 HSILINCRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE 172
H + ++ + EA AL ++ GC+PD+FTY T++NGLC+ G +AL+L ++M G E
Sbjct: 193 HGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 252
Query: 173 FGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDW 232
D V Y TIID +C V+ A+ LF +M ++ I PNVVTYNSLI C + W
Sbjct: 253 ------ADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306
Query: 233 NEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTL 292
++A RL M+++ ++PNVVTFS ++D K GK+ EA +L D MI+ + P+ F Y++L
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366
Query: 293 MDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGI 352
++GFC+ R++ AK +F M S C +VV+Y TLI G+CK K VEE + L+R+M +G+
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426
Query: 353 RPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALE 412
VTY+TL GLF+ + A K+F +M + V D Y+ +DGLCK G + +AL
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALV 486
Query: 413 LFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLC 472
+F + SK E DI +Y+ +I+G+CK GK+E W+LF SLS G+ PNV+ Y MI G C
Sbjct: 487 VFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFC 546
Query: 473 NDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKSSRGKLMSQMSSC 527
G ++A LF +M+ G P+ +NT++ +R+ + K++ +L+ +M SC
Sbjct: 547 RKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGD--KAASAELIKEMRSC 599
Score = 265 bits (676), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 149/453 (32%), Positives = 241/453 (53%), Gaps = 12/453 (2%)
Query: 56 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSI 115
+EA+ + D M M P V+ ++ G NK + V +L R+ + G PDL+T+
Sbjct: 167 SEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAV-ALIDRMVARGCQPDLFTYGT 225
Query: 116 LIN--CR---IMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 170
++N C+ I A +L K+ E DV Y T+I+ LC + ALNLF EM N
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285
Query: 171 GEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHAD 230
+P+ VTYN++I +C G A L M + INPNVVT+++LI F
Sbjct: 286 ------IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 339
Query: 231 DWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYN 290
EA++L+ +M+ + + P++ T+S +++ C + +++EA + +LMI PN YN
Sbjct: 340 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 399
Query: 291 TLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPK 350
TL+ GFC RV ELF M G + + V+Y TLI G + + + A +++KM+
Sbjct: 400 TLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD 459
Query: 351 GIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEA 410
G+ P ++TYS L GL + ++E AL +F+ +Q + + D Y YN I+G+CK G V +
Sbjct: 460 GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDG 519
Query: 411 LELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHG 470
+LFC++ + ++I Y+ +I G C+ G E A LF+ + G LPN TYN +I
Sbjct: 520 WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579
Query: 471 LCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIM 503
DG + +L +M + G D + ++
Sbjct: 580 RLRDGDKAASAELIKEMRSCGFVGDASTISMVI 612
Score = 206 bits (523), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 208/400 (52%), Gaps = 6/400 (1%)
Query: 112 THSILINCRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 171
+ ++L++ ++ +A LF ++ P + +N L++ + + + ++L E M N
Sbjct: 52 SRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRI 111
Query: 172 EFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADD 231
+ D +YN +I+ C+ + A+ + +M P++VT +SL++ + H
Sbjct: 112 SY------DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR 165
Query: 232 WNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNT 291
+EA L +M PN VTF+ ++ L + K EA L+D M+ G P+ F Y T
Sbjct: 166 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 225
Query: 292 LMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKG 351
+++G C G ++ A L ME DVV YTT+I+ C KNV +ALNL+ +M KG
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285
Query: 352 IRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEAL 411
IRP VVTY++L L + A +L +M + + ++ ID K G ++EA
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345
Query: 412 ELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGL 471
+L+ + + DI +YS LI+G C +L+ A +F+ + PNVVTYN +I G
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405
Query: 472 CNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNE 511
C ++++ +LF +M +G+ + V +NT++ G + +
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 183/344 (53%), Gaps = 15/344 (4%)
Query: 73 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINC-----RIMEAAAL 127
P V ++N L CL + L + + P++ T S LI+ +++EA L
Sbjct: 288 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 347
Query: 128 FTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTI 187
+ ++ +PD+FTY++LING C A ++FE M + + C P+ VTYNT+
Sbjct: 348 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD------CFPNVVTYNTL 401
Query: 188 IDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGV 247
I G CK V++ MELF +M + N VTYN+LI A D + A+++F KM+ GV
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Query: 248 HPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKE 307
P+++T+S+++D LCK GK+E+A + + + + + P+ + YN +++G C G+V +
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521
Query: 308 LFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLF 367
LF S+ G +V+ YTT+I+G+C+ EEA L+R+M G P TY+TL
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 581
Query: 368 EVHQVEHALKLFDEMQH----NDVAADTYIYNTFIDGLCKNGFV 407
+ +L EM+ D + + + N DG + ++
Sbjct: 582 RDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYL 625
Score = 172 bits (437), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 202/405 (49%), Gaps = 18/405 (4%)
Query: 47 QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGL 106
+GDI+L AL + M + V + + L K+ + L+LF +++ G+
Sbjct: 233 RGDIDL-----ALSLLKKMEK-GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 286
Query: 107 FPDLYTHSILINC-----RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALN 161
P++ T++ LI C R +A+ L + + P+V T++ LI+ + G + A
Sbjct: 287 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 162 LFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNS 221
L++EM + PD TY+++I+G C +D+A +F M ++ PNVVTYN+
Sbjct: 347 LYDEMIKRS------IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 222 LIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIG 281
LI F A E LF +M +G+ N VT++ ++ L + G + A ++ M+ G
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 282 VHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEAL 341
V P+ Y+ L+DG C G++ A +F ++ + D+ +Y +I G CK VE+
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGW 520
Query: 342 NLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGL 401
+L+ + KG++P V+ Y+T+ G E A LF EM+ + ++ YNT I
Sbjct: 521 DLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRAR 580
Query: 402 CKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAW 446
++G + EL + + + D + S +I+ L G+LE ++
Sbjct: 581 LRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHD-GRLEKSY 624
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 344 bits (882), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 177/475 (37%), Positives = 283/475 (59%), Gaps = 14/475 (2%)
Query: 58 ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYT----- 112
AL + M+++ P V+ ++L G +K ++L ++ TG P+ T
Sbjct: 135 ALAVLGKMMKLGYEPNIVTLSSLLNG-YCHSKRISEAVALVDQMFVTGYQPNTVTFNTLI 193
Query: 113 HSILINCRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE 172
H + ++ + EA AL ++ GC+PD+ TY ++NGLC+ G T +A NL +M G E
Sbjct: 194 HGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE 253
Query: 173 FGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDW 232
P + YNTIIDG+CK +D A+ LF +M+ + I PNVVTY+SLI C + W
Sbjct: 254 ------PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307
Query: 233 NEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTL 292
++A RL M+++ ++P+V TFS ++D K GK+ EA +L D M++ + P+ Y++L
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367
Query: 293 MDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGI 352
++GFC+ R++ AK++F M S C DVV+Y TLI G+CK K VEE + ++R+M +G+
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 427
Query: 353 RPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALE 412
VTY+ L GLF+ + A ++F EM + V + YNT +DGLCKNG + +A+
Sbjct: 428 VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMV 487
Query: 413 LFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLC 472
+F + SK E I +Y+ +I+G+CK GK+E W+LF +LS G+ P+VV YN MI G C
Sbjct: 488 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 547
Query: 473 NDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKSSRGKLMSQMSSC 527
G ++A LF +M+ G P+ +NT++ +R+ + S+ +L+ +M SC
Sbjct: 548 RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA--ELIKEMRSC 600
Score = 203 bits (516), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 127/431 (29%), Positives = 218/431 (50%), Gaps = 41/431 (9%)
Query: 120 RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 179
++ +A ALF ++ P + ++ L++ + + V ++L E+M N G+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN----LGI--PH 114
Query: 180 DTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLF 239
+ TY+ +I+ C+ + A+ + +M PN+VT +SL++ + H+ +EA L
Sbjct: 115 NHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV 174
Query: 240 IKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLT 299
+M G PN VTF+ ++ L + K EA L+D M+ G P+ Y +++G C
Sbjct: 175 DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKR 234
Query: 300 GRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTY 359
G + A L ME V+ Y T+I+G CK K++++ALNL+++M KGIRP VVTY
Sbjct: 235 GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 294
Query: 360 STL-------------------------------FLGLFEVHQVEHAL----KLFDEMQH 384
S+L F L + E L KL+DEM
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 354
Query: 385 NDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLET 444
+ Y++ I+G C + + EA ++F + + D+++Y+ LI G CK ++E
Sbjct: 355 RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEE 414
Query: 445 AWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIML 504
E+F+ +S+ GL+ N VTYNI+I GL G D A ++F +M + GV P+ + +NT++
Sbjct: 415 GMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLD 474
Query: 505 GFIRNNETSKS 515
G +N + K+
Sbjct: 475 GLCKNGKLEKA 485
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 148/285 (51%)
Query: 233 NEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTL 292
++A LF +M+ P+++ FS ++ + K K + L + M +G+ N + Y+ L
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122
Query: 293 MDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGI 352
++ FC ++ A + M G ++V+ ++L+NGYC +K + EA+ L +M G
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182
Query: 353 RPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALE 412
+P VT++TL GLF ++ A+ L D M D Y ++GLCK G A
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242
Query: 413 LFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLC 472
L + K E ++ Y+ +IDGLCK ++ A LF+ + G+ PNVVTY+ +I LC
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 473 NDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKSSR 517
N G+ A L DM + + PD F+ ++ F++ + ++ +
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 347
Score = 126 bits (316), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 135/278 (48%), Gaps = 12/278 (4%)
Query: 57 EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSIL 116
EA ++D M++ P + +++ L + D +F+ + S FPD+ T++ L
Sbjct: 344 EAEKLYDEMVK-RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 402
Query: 117 INC-----RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 171
I R+ E +F ++ G + TYN LI GL + G +A +F+EM +
Sbjct: 403 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD-- 460
Query: 172 EFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADD 231
GV P+ +TYNT++DG+CK G ++KAM +F ++ + P + TYN +I A
Sbjct: 461 --GV--PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516
Query: 232 WNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNT 291
+ LF + +GV P+VV ++ ++ C+ G EEA L M + G PN+ YNT
Sbjct: 517 VEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNT 576
Query: 292 LMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLIN 329
L+ G + EL M S G D + + N
Sbjct: 577 LIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 614
Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 136/270 (50%), Gaps = 6/270 (2%)
Query: 259 DELCKNG----KMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMES 314
++L +NG K+++A L M++ P+ ++ L+ + + L M++
Sbjct: 50 EKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN 109
Query: 315 NGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEH 374
G H+ +Y+ LIN +C+ + AL + KM+ G P +VT S+L G ++
Sbjct: 110 LGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISE 169
Query: 375 ALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLID 434
A+ L D+M +T +NT I GL + EA+ L + + D+++Y +++
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN 229
Query: 435 GLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEP 494
GLCK G + A+ L + + L P V+ YN +I GLC MD A +LF +ME KG+ P
Sbjct: 230 GLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 289
Query: 495 DCVIFNTIMLGFIRNNETSKSSRGKLMSQM 524
+ V +++++ S +SR L+S M
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASR--LLSDM 317
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 119/256 (46%), Gaps = 38/256 (14%)
Query: 56 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSI 115
+EA +F++M+ H P V ++N L K K + + +F+ ++ GL + T++I
Sbjct: 378 DEAKQMFEFMVSKH-CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 116 LINCRIME-----AAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 170
LI A +F ++ G P++ TYNTL++GLC+ G A+ +FE +
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 171 GE----------------------FGVVC-------KPDTVTYNTIIDGVCKEGFVDKAM 201
E + + C KPD V YNT+I G C++G ++A
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 556
Query: 202 ELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDEL 261
LF +MK++ PN YN+LI D + L +M G + T ++ + L
Sbjct: 557 ALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 616
Query: 262 CKNGKMEEASRLLDLM 277
+G+++++ LD++
Sbjct: 617 -HDGRLDKS--FLDML 629
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 342 bits (877), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 181/475 (38%), Positives = 284/475 (59%), Gaps = 14/475 (2%)
Query: 58 ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYT----- 112
AL + M+++ P V+ ++L G + D V +L ++ G PD T
Sbjct: 139 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV-ALVDQMVEMGYRPDTITFTTLI 197
Query: 113 HSILINCRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE 172
H + ++ + EA AL ++ GC+P++ TY ++NGLC+ G T +ALNL +M E
Sbjct: 198 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE 257
Query: 173 FGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDW 232
D V +NTIID +CK VD A+ LF +M+ + I PNVVTY+SLI C W
Sbjct: 258 ------ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 311
Query: 233 NEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTL 292
++A +L M+++ ++PN+VTF+ ++D K GK EA +L D MI+ + P+ F YN+L
Sbjct: 312 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSL 371
Query: 293 MDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGI 352
++GFC+ R++ AK++F M S C DVV+Y TLI G+CK+K VE+ L+R+M +G+
Sbjct: 372 VNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL 431
Query: 353 RPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALE 412
VTY+TL GLF ++A K+F +M + V D Y+ +DGLC NG + +ALE
Sbjct: 432 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 491
Query: 413 LFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLC 472
+F + S+ +LDI Y+ +I+G+CK GK++ W+LF SLS G+ PNVVTYN MI GLC
Sbjct: 492 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 551
Query: 473 NDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKSSRGKLMSQMSSC 527
+ + +A+ L M+ G P+ +NT++ +R+ + K++ +L+ +M SC
Sbjct: 552 SKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGD--KAASAELIREMRSC 604
Score = 200 bits (508), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 209/407 (51%), Gaps = 8/407 (1%)
Query: 120 RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 179
++ +A LF + P + +N L++ + + V ++L E+M G+
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLY--- 121
Query: 180 DTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLF 239
TYN +I+ C+ + A+ L +M P++VT +SL++ + H ++A L
Sbjct: 122 ---TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 178
Query: 240 IKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLT 299
+M++ G P+ +TF+ ++ L + K EA L+D M+Q G PN Y +++G C
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 300 GRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTY 359
G + A L ME+ DVV + T+I+ CK ++V++ALNL+++M KGIRP VVTY
Sbjct: 239 GDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 298
Query: 360 STLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGN 419
S+L L + A +L +M + + +N ID K G +EA +L+ +
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358
Query: 420 SKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDK 479
+ DI +Y+ L++G C +L+ A ++F+ + P+VVTYN +I G C +++
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418
Query: 480 AHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKSSRGKLMSQMSS 526
+LF +M +G+ D V + T++ G + + + K+ QM S
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ--KVFKQMVS 463
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 171/334 (51%)
Query: 184 YNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMM 243
Y I+ + +D A+ LF M P++V +N L+ + ++ L KM
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 244 DQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVN 303
+ + T++++++ C+ ++ A LL M+++G P+ ++L++G+C R++
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 304 HAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLF 363
A L M G D +++TTLI+G EA+ L +M+ +G +P +VTY +
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 364 LGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYE 423
GL + + AL L ++M+ + AD I+NT ID LCK V +AL LF +
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 424 LDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDL 483
++++YS LI LC G+ A +L + + PN+VT+N +I +G+ +A L
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 484 FLDMEAKGVEPDCVIFNTIMLGFIRNNETSKSSR 517
+ DM + ++PD +N+++ GF ++ K+ +
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 386
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 336 bits (861), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 178/475 (37%), Positives = 281/475 (59%), Gaps = 14/475 (2%)
Query: 58 ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYT----- 112
AL + M+++ P V+ ++L G + D V +L ++ G PD T
Sbjct: 64 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV-ALVDQMVEMGYRPDTITFTTLI 122
Query: 113 HSILINCRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE 172
H + ++ + EA AL ++ GC+P++ TY ++NGLC+ G +A NL +M E
Sbjct: 123 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 182
Query: 173 FGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDW 232
D V +NTIID +CK VD A+ LF +M+ + I PNVVTY+SLI C W
Sbjct: 183 ------ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 236
Query: 233 NEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTL 292
++A +L M+++ ++PN+VTF+ ++D K GK EA +L D MI+ + P+ F YN+L
Sbjct: 237 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 296
Query: 293 MDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGI 352
++GFC+ R++ AK++F M S C D+ +Y TLI G+CK+K VE+ L+R+M +G+
Sbjct: 297 INGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL 356
Query: 353 RPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALE 412
VTY+TL GLF ++A K+F +M + V D Y+ +DGLC NG + +ALE
Sbjct: 357 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 416
Query: 413 LFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLC 472
+F + S+ +LDI Y+ +I+G+CK GK++ W+LF SLS G+ PNVVTYN MI GLC
Sbjct: 417 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 476
Query: 473 NDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKSSRGKLMSQMSSC 527
+ + +A+ L M+ G PD +NT++ +R+ + K++ +L+ +M SC
Sbjct: 477 SKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGD--KAASAELIREMRSC 529
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/413 (29%), Positives = 208/413 (50%), Gaps = 41/413 (9%)
Query: 138 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFV 197
P +F +N L++ + + + ++L E+M G+ + TYN +I+ C+ +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQ----RLGI--SHNLYTYNILINCFCRRSQI 61
Query: 198 DKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVI 257
A+ L +M P++VT +SL++ + H ++A L +M++ G P+ +TF+ +
Sbjct: 62 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 121
Query: 258 VDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGC 317
+ L + K EA L+D M+Q G PN Y +++G C G ++ A L ME+
Sbjct: 122 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 181
Query: 318 MHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTL--------------- 362
DVV + T+I+ CK ++V++ALNL+++M KGIRP VVTYS+L
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241
Query: 363 ----------------FLGLFEVHQVE----HALKLFDEMQHNDVAADTYIYNTFIDGLC 402
F L + E A KL D+M + D + YN+ I+G C
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301
Query: 403 KNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVV 462
+ + +A ++F + + D+ +Y+ LI G CK ++E ELF+ +S GL+ + V
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361
Query: 463 TYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKS 515
TY +I GL +DG D A +F M + GV PD + ++ ++ G N + K+
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 414
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 333 bits (854), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 181/459 (39%), Positives = 278/459 (60%), Gaps = 18/459 (3%)
Query: 41 RSKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKR 100
R+ S+ + +NL E + +F M++ P P V F+ + +AK+K+YD V+SLF
Sbjct: 39 RTFSTKRSSMNL---EEEIDLFCKMIQSRPLPSIVD-FSKVLSKIAKSKNYDLVISLFHH 94
Query: 101 LNSTGLFPDLYTHSILINC-----RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGH 155
+ G+ DLY+++I+INC R + A ++ K+ FG EPDV T ++LING C+
Sbjct: 95 MEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNR 154
Query: 156 TIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPN 215
A++L +M E G +PD V YNTIIDG CK G V+ A+ELF +M+ + + +
Sbjct: 155 VFDAIDLVSKME----EMGF--RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRAD 208
Query: 216 VVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLD 275
VTYNSL+ + W++A RL M+ + + PNV+TF+ ++D K GK EA +L +
Sbjct: 209 AVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYE 268
Query: 276 LMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTK 335
M + V P+ F YN+L++G C+ GRV+ AK++ M + GC+ DVV+Y TLING+CK+K
Sbjct: 269 EMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSK 328
Query: 336 NVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYN 395
V+E L+R+M +G+ +TY+T+ G F+ + + A ++F M D + Y+
Sbjct: 329 RVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYS 385
Query: 396 TFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRV 455
+ GLC N V +AL LF + S+ ELDI +Y+ +I G+CKIG +E AW+LF+SLS
Sbjct: 386 ILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCK 445
Query: 456 GLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEP 494
GL P+VV+Y MI G C Q DK+ L+ M+ G+ P
Sbjct: 446 GLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 165 bits (418), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 178/330 (53%), Gaps = 2/330 (0%)
Query: 197 VDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSV 256
+++ ++LF +M P++V ++ ++ + + +++ LF M G+ ++ ++++
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 257 IVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNG 316
+++ LC+ + A ++ M++ G P+ ++L++GFC RV A +L ME G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 317 CMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHAL 376
DVV Y T+I+G CK V +A+ L+ +M G+R VTY++L GL + A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 377 KLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGL 436
+L +M D+ + + ID K G EA++L+ + + D+ +Y+ LI+GL
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 437 CKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDC 496
C G+++ A ++ + G LP+VVTYN +I+G C ++D+ LF +M +G+ D
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349
Query: 497 VIFNTIMLGFIRNNETSKSSRGKLMSQMSS 526
+ +NTI+ G+ + + ++ S+M S
Sbjct: 350 ITYNTIIQGYFQAGRPDAAQ--EIFSRMDS 377
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 99/189 (52%), Gaps = 2/189 (1%)
Query: 336 NVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYN 395
N+EE ++L+ KM+ P++V +S + + + + + LF M+ + D Y YN
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108
Query: 396 TFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRV 455
I+ LC+ + AL + + YE D+++ S LI+G C+ ++ A +L + +
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168
Query: 456 GLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKS 515
G P+VV YN +I G C G ++ A +LF ME GV D V +N+++ G + S +
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 516 SRGKLMSQM 524
+R LM M
Sbjct: 229 AR--LMRDM 235
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 329 bits (843), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 175/474 (36%), Positives = 281/474 (59%), Gaps = 17/474 (3%)
Query: 58 ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYT----- 112
AL + M+++ P V+ ++L G + D V +L ++ G PD +T
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV-ALVDQMVEMGYKPDTFTFTTLI 195
Query: 113 HSILINCRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE 172
H + ++ + EA AL ++ GC+PD+ TY T++NGLC+ G +ALNL +M
Sbjct: 196 HGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAAR-- 253
Query: 173 FGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDW 232
K + V +NTIID +CK V+ A++LF +M+ + I PNVVTYNSLI+C + W
Sbjct: 254 ----IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRW 309
Query: 233 NEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTL 292
++A RL M+++ ++PNVVTF+ ++D K GK+ EA +L + MIQ + P+T YN L
Sbjct: 310 SDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLL 369
Query: 293 MDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGI 352
++GFC+ R++ AK++F M S C+ ++ +Y TLING+CK K VE+ + L+R+M +G+
Sbjct: 370 INGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGL 429
Query: 353 RPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALE 412
VTY+T+ G F+ + A +F +M N V D Y+ + GLC G + AL
Sbjct: 430 VGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALV 489
Query: 413 LFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLC 472
+F + S+ EL+I Y+ +I+G+CK GK+ AW+LF SLS + P+VVTYN MI GLC
Sbjct: 490 IFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLC 546
Query: 473 NDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKSSRGKLMSQMSS 526
+ + +A DLF M+ G P+ +NT++ +R + +++ +L+ +M S
Sbjct: 547 SKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLR--DCDRAASAELIKEMRS 598
Score = 189 bits (480), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 224/441 (50%), Gaps = 21/441 (4%)
Query: 71 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINCRIMEAAALF-- 128
+PP V SF L G + + + ++G + ++ + + ++ +A LF
Sbjct: 23 NPPTVPSFFNLCGSGCWERSFAS---------ASGDYREILRNRLSDIIKVDDAVDLFGD 73
Query: 129 -TKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTI 187
K R F P + +N L++ + + + ++L E+M G+ D TY+
Sbjct: 74 MVKSRPF---PSIVEFNKLLSAVAKMNKFELVISLGEQMQT----LGI--SHDLYTYSIF 124
Query: 188 IDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGV 247
I+ C+ + A+ + +M P++VT +SL++ + H+ ++A L +M++ G
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 248 HPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKE 307
P+ TF+ ++ L + K EA L+D M+Q G P+ Y T+++G C G ++ A
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALN 244
Query: 308 LFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLF 367
L ME+ +VV + T+I+ CK ++VE A++L+ +M KGIRP VVTY++L L
Sbjct: 245 LLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLC 304
Query: 368 EVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDII 427
+ A +L M + + +N ID K G ++EA +L + + D I
Sbjct: 305 NYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTI 364
Query: 428 SYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDM 487
+Y+ LI+G C +L+ A ++F+ + LPN+ TYN +I+G C +++ +LF +M
Sbjct: 365 TYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREM 424
Query: 488 EAKGVEPDCVIFNTIMLGFIR 508
+G+ + V + TI+ GF +
Sbjct: 425 SQRGLVGNTVTYTTIIQGFFQ 445
Score = 162 bits (411), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 172/321 (53%)
Query: 197 VDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSV 256
VD A++LF M P++V +N L+ + + + L +M G+ ++ T+S+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 257 IVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNG 316
++ C+ ++ A +L M+++G P+ ++L++G+C + R++ A L M G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 317 CMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHAL 376
D ++TTLI+G EA+ L +M+ +G +P +VTY T+ GL + ++ AL
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 377 KLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGL 436
L ++M+ + A+ I+NT ID LCK V A++LF + ++++Y+ LI+ L
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 437 CKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDC 496
C G+ A L ++ + PNVVT+N +I +G++ +A L +M + ++PD
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363
Query: 497 VIFNTIMLGFIRNNETSKSSR 517
+ +N ++ GF +N ++ +
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQ 384
Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 144/313 (46%), Gaps = 25/313 (7%)
Query: 235 AKRLFIKMMDQGVH--PNVVTF---------------------SVIVDELCKNGKMEEAS 271
AKRLF+ QG+ P V +F ++ + L K+++A
Sbjct: 9 AKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAV 68
Query: 272 RLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGY 331
L M++ P+ +N L+ + L M++ G HD+ +Y+ IN +
Sbjct: 69 DLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCF 128
Query: 332 CKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADT 391
C+ + AL + KM+ G P +VT S+L G ++ A+ L D+M DT
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188
Query: 392 YIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQS 451
+ + T I GL + EA+ L + + D+++Y +++GLCK G ++ A L
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNK 248
Query: 452 LSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNE 511
+ + NVV +N +I LC ++ A DLF +ME KG+ P+ V +N+++
Sbjct: 249 MEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGR 308
Query: 512 TSKSSRGKLMSQM 524
S +SR L+S M
Sbjct: 309 WSDASR--LLSNM 319
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 98/184 (53%), Gaps = 15/184 (8%)
Query: 92 DTVLSLFKRLNSTGLFPDLYTHSILINC-----RIMEAAALFTKLRVFGCEPDVFTYNTL 146
D+ +FK++ S + D+ T+SIL++ ++ A +F L+ E ++F YNT+
Sbjct: 450 DSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTM 509
Query: 147 INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQ 206
I G+C+ G A +LF ++ KPD VTYNT+I G+C + + +A +LF +
Sbjct: 510 IEGMCKAGKVGEAWDLFCSLS---------IKPDVVTYNTMISGLCSKRLLQEADDLFRK 560
Query: 207 MKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGK 266
MK++ PN TYN+LI D + L +M G + T S++ + L +G+
Sbjct: 561 MKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNML-HDGR 619
Query: 267 MEEA 270
++++
Sbjct: 620 LDKS 623
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 320 bits (821), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 165/443 (37%), Positives = 262/443 (59%), Gaps = 12/443 (2%)
Query: 58 ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYT----- 112
AL + M+++ P V+ ++L G + D V +L ++ G PD T
Sbjct: 139 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV-ALVDQMVEMGYRPDTITFTTLI 197
Query: 113 HSILINCRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE 172
H + ++ + EA AL ++ GC+P++ TY ++NGLC+ G +A NL +M E
Sbjct: 198 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 257
Query: 173 FGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDW 232
VV Y+T+ID +CK D A+ LF +M+++ + PNV+TY+SLI C + + W
Sbjct: 258 ANVV------IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERW 311
Query: 233 NEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTL 292
++A RL M+++ ++PNVVTF+ ++D K GK+ EA +L D MI+ + P+ F Y++L
Sbjct: 312 SDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 371
Query: 293 MDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGI 352
++GFC+ R++ AK +F M S C +VV+Y TLING+CK K ++E + L+R+M +G+
Sbjct: 372 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGL 431
Query: 353 RPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALE 412
VTY+TL G F+ ++A +F +M + V + YNT +DGLCKNG + +A+
Sbjct: 432 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMV 491
Query: 413 LFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLC 472
+F + SK E I +Y+ +I+G+CK GK+E W+LF SLS G+ P+V+ YN MI G C
Sbjct: 492 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFC 551
Query: 473 NDGQMDKAHDLFLDMEAKGVEPD 495
G ++A LF M G PD
Sbjct: 552 RKGLKEEADALFRKMREDGPLPD 574
Score = 287 bits (735), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 169/510 (33%), Positives = 272/510 (53%), Gaps = 43/510 (8%)
Query: 41 RSKSSGQGDINLITPN--------EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYD 92
R+ SSG GD I N +A+ +F M++ P P + FN L +AK K +D
Sbjct: 44 RAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRP-LPSIFEFNKLLSAIAKMKKFD 102
Query: 93 TVLSLFKRLNSTGLFPDLYTHSILINC-----RIMEAAALFTKLRVFGCEPDVFTYNTLI 147
V+SL +++ G+ +LYT++ILINC +I A AL K+ G EP + T ++L+
Sbjct: 103 LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 148 NGLCRTGHTIVALNLFEEMA---------------------NGNGEFGVV--------CK 178
NG C A+ L ++M N E + C+
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222
Query: 179 PDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRL 238
P+ VTY +++G+CK G +D A L +M+ I NVV Y+++I ++A L
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNL 282
Query: 239 FIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCL 298
F +M ++GV PNV+T+S ++ LC + +ASRLL MI+ ++PN +N L+D F
Sbjct: 283 FTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVK 342
Query: 299 TGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVT 358
G++ A++L+ M D+ +Y++LING+C ++EA +++ M+ K P VVT
Sbjct: 343 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 402
Query: 359 YSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIG 418
Y+TL G + +++ ++LF EM + +T Y T I G + A +F +
Sbjct: 403 YNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 462
Query: 419 NSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMD 478
+ +I++Y+ L+DGLCK GKLE A +F+ L R + P + TYNIMI G+C G+++
Sbjct: 463 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 522
Query: 479 KAHDLFLDMEAKGVEPDCVIFNTIMLGFIR 508
DLF + KGV+PD +I+NT++ GF R
Sbjct: 523 DGWDLFCSLSLKGVKPDVIIYNTMISGFCR 552
Score = 169 bits (428), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 179/352 (50%), Gaps = 21/352 (5%)
Query: 47 QGDINLITPNEALCIFDYMLRMHPSP--PPVSSFNILFGCLAKNKHYDTVLSLFKRLNST 104
+GDI+L F+ + +M + V ++ + L K +H D L+LF + +
Sbjct: 238 RGDIDLA--------FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 105 GLFPDLYTHSILINC-----RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVA 159
G+ P++ T+S LI+C R +A+ L + + P+V T+N LI+ + G + A
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349
Query: 160 LNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTY 219
L++EM + PD TY+++I+G C +D+A +F M ++ PNVVTY
Sbjct: 350 EKLYDEMIKRS------IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 403
Query: 220 NSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQ 279
N+LI+ F A +E LF +M +G+ N VT++ ++ + + A + M+
Sbjct: 404 NTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 463
Query: 280 IGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEE 339
GVHPN YNTL+DG C G++ A +F ++ + + +Y +I G CK VE+
Sbjct: 464 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 523
Query: 340 ALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADT 391
+L+ + KG++P V+ Y+T+ G E A LF +M+ + D+
Sbjct: 524 GWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 152/299 (50%)
Query: 219 YNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMI 278
Y ++ H+ ++A LF M+ P++ F+ ++ + K K + L + M
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 279 QIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVE 338
++G+ N + YN L++ FC +++ A L M G +V+ ++L+NGYC K +
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 339 EALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFI 398
+A+ L +M+ G RP +T++TL GLF ++ A+ L D M + Y +
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 399 DGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLL 458
+GLCK G + A L + +K E +++ YS +ID LCK + A LF + G+
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 459 PNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKSSR 517
PNV+TY+ +I LCN + A L DM + + P+ V FN ++ F++ + ++ +
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEK 351
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 320 bits (820), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 192/548 (35%), Positives = 282/548 (51%), Gaps = 80/548 (14%)
Query: 53 ITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYT 112
I ++A+ +F M+ P P V F+ LF +AK K YD VL+L K++ G+ +LYT
Sbjct: 67 IKADDAIDLFRDMIHSRP-LPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYT 125
Query: 113 HSILINC----------------------------------------RIMEAAALFTKLR 132
SI+INC R+ EA L ++
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185
Query: 133 VFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFG-------------VVCKP 179
G +PD+ T NTL+NGLC +G A+ L ++M E+G V+CK
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV----EYGCQPNAVTYGPVLNVMCKS 241
Query: 180 --------------------DTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTY 219
D V Y+ IIDG+CK G +D A LF +M+ + I N++TY
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITY 301
Query: 220 NSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQ 279
N LI F +A W++ +L M+ + ++PNVVTFSV++D K GK+ EA L MI
Sbjct: 302 NILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIH 361
Query: 280 IGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEE 339
G+ P+T Y +L+DGFC ++ A ++ M S GC ++ ++ LINGYCK +++
Sbjct: 362 RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDD 421
Query: 340 ALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFID 399
L L+RKM +G+ VTY+TL G E+ ++ A +LF EM V + Y +D
Sbjct: 422 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLD 481
Query: 400 GLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLP 459
GLC NG +ALE+F I SK ELDI Y+ +I G+C K++ AW+LF SL G+ P
Sbjct: 482 GLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 541
Query: 460 NVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKSSRGK 519
V TYNIMI GLC G + +A LF ME G PD +N ++ + + + +KS K
Sbjct: 542 GVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSV--K 599
Query: 520 LMSQMSSC 527
L+ ++ C
Sbjct: 600 LIEELKRC 607
Score = 203 bits (516), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 143/490 (29%), Positives = 220/490 (44%), Gaps = 85/490 (17%)
Query: 73 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINC-----RIMEAAAL 127
P +F+ L L L L R+ G PDL T + L+N + EA L
Sbjct: 156 PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLL 215
Query: 128 FTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTI 187
K+ +GC+P+ TY ++N +C++G T +A+ L +M N K D V Y+ I
Sbjct: 216 IDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN------IKLDAVKYSII 269
Query: 188 IDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGV 247
IDG+CK G +D A LF +M+ + I N++TYN LI F +A W++ +L M+ + +
Sbjct: 270 IDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKI 329
Query: 248 HPNVVTFSVIVDELCKNGKMEEA-----------------------------------SR 272
+PNVVTFSV++D K GK+ EA ++
Sbjct: 330 NPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQ 389
Query: 273 LLDLMIQIGVHPN-----------------------------------TFVYNTLMDGFC 297
++DLM+ G PN T YNTL+ GFC
Sbjct: 390 MVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 449
Query: 298 LTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVV 357
G++N AKELF M S ++V+Y L++G C E+AL ++ K+ + +
Sbjct: 450 ELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIG 509
Query: 358 TYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAI 417
Y+ + G+ +V+ A LF + V YN I GLCK G + EA LF +
Sbjct: 510 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM 569
Query: 418 GNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQM 477
+ D +Y+ LI G + +L + L R G + T ++I L +DG++
Sbjct: 570 EEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML-SDGRL 628
Query: 478 DKAHDLFLDM 487
K+ FLDM
Sbjct: 629 KKS---FLDM 635
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 317 bits (813), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 186/543 (34%), Positives = 281/543 (51%), Gaps = 72/543 (13%)
Query: 53 ITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYT 112
I ++A+ +F M++ P P V FN LF +AK K Y+ VL+L K++ S G+ +YT
Sbjct: 67 IKADDAVDLFRDMIQSRP-LPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYT 125
Query: 113 HSILIN----------------------------------------CRIMEAAALFTKLR 132
SI+IN CR+ EA L ++
Sbjct: 126 LSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMV 185
Query: 133 VFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE---------FGVVCKP---- 179
G +P + T NTL+NGLC G A+ L + M + V+CK
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245
Query: 180 ----------------DTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLI 223
D V Y+ IIDG+CK+G +D A LF +M+ + +++TYN+LI
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305
Query: 224 HCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVH 283
F +A W++ +L M+ + + PNVVTFSV++D K GK+ EA +LL M+Q G+
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Query: 284 PNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNL 343
PNT YN+L+DGFC R+ A ++ M S GC D++++ LINGYCK +++ L L
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425
Query: 344 YRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCK 403
+R+M +G+ VTY+TL G + ++E A KLF EM V D Y +DGLC
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 404 NGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVT 463
NG + +ALE+F I SK ELDI Y +I G+C K++ AW+LF SL G+ +
Sbjct: 486 NGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARA 545
Query: 464 YNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKSSRGKLMSQ 523
YNIMI LC + KA LF M +G PD + +N ++ + +++ + ++ +L+ +
Sbjct: 546 YNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAA--ELIEE 603
Query: 524 MSS 526
M S
Sbjct: 604 MKS 606
Score = 253 bits (645), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 143/445 (32%), Positives = 235/445 (52%), Gaps = 12/445 (2%)
Query: 56 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSI 115
+EAL + D M+ M P ++ N L L N + L R+ TG P+ T+
Sbjct: 175 SEALELVDRMVEMGHKPTLIT-LNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 116 LIN--CRIMEAA---ALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 170
++N C+ + A L K+ + D Y+ +I+GLC+ G A NLF EM
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 171 GEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHAD 230
K D +TYNT+I G C G D +L M I+PNVVT++ LI F
Sbjct: 294 ------FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEG 347
Query: 231 DWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYN 290
EA +L +MM +G+ PN +T++ ++D CK ++EEA +++DLMI G P+ +N
Sbjct: 348 KLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFN 407
Query: 291 TLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPK 350
L++G+C R++ ELF M G + + V+Y TL+ G+C++ +E A L+++M+ +
Sbjct: 408 ILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSR 467
Query: 351 GIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEA 410
+RP +V+Y L GL + ++E AL++F +++ + + D IY I G+C V +A
Sbjct: 468 RVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDA 527
Query: 411 LELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHG 470
+LFC++ +LD +Y+ +I LC+ L A LF+ ++ G P+ +TYNI+I
Sbjct: 528 WDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRA 587
Query: 471 LCNDGQMDKAHDLFLDMEAKGVEPD 495
D A +L +M++ G D
Sbjct: 588 HLGDDDATTAAELIEEMKSSGFPAD 612
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 310 bits (794), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 163/445 (36%), Positives = 260/445 (58%), Gaps = 12/445 (2%)
Query: 56 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSI 115
N+AL +F M+ P P + F L +AK YD V+SLF+++ G+ P L T +I
Sbjct: 65 NDALDLFTRMVHSRPLPS-IIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123
Query: 116 LINCRIM-----EAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 170
+++C + A+ K+ G EPD+ T+ +L+NG C A+ LF+++
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQI---- 179
Query: 171 GEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHAD 230
G+ KP+ VTY T+I +CK ++ A+ELF QM PNVVTYN+L+
Sbjct: 180 --LGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIG 237
Query: 231 DWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYN 290
W +A L MM + + PNV+TF+ ++D K GK+ EA L ++MIQ+ V+P+ F Y
Sbjct: 238 RWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYG 297
Query: 291 TLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPK 350
+L++G C+ G ++ A+++F ME NGC + V YTTLI+G+CK+K VE+ + ++ +M K
Sbjct: 298 SLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQK 357
Query: 351 GIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEA 410
G+ +TY+ L G V + + A ++F++M D YN +DGLC NG V +A
Sbjct: 358 GVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKA 417
Query: 411 LELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHG 470
L +F + + +++I++Y+ +I G+CK+GK+E A++LF SL G+ PNV+TY MI G
Sbjct: 418 LMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISG 477
Query: 471 LCNDGQMDKAHDLFLDMEAKGVEPD 495
C G + +A LF M+ G P+
Sbjct: 478 FCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 181/357 (50%), Gaps = 6/357 (1%)
Query: 159 ALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVT 218
AL+LF M + P + + ++ + K D + LF QM+ I P + T
Sbjct: 67 ALDLFTRMVHSRP------LPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCT 120
Query: 219 YNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMI 278
N ++HC + A KMM G P++VTF+ +++ C ++E+A L D ++
Sbjct: 121 CNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQIL 180
Query: 279 QIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVE 338
+G PN Y TL+ C +NHA ELF M +NG +VV+Y L+ G C+
Sbjct: 181 GMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWG 240
Query: 339 EALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFI 398
+A L R M+ + I P V+T++ L +V ++ A +L++ M V D + Y + I
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 399 DGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLL 458
+GLC G + EA ++F + + + + Y+ LI G CK ++E ++F +S+ G++
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360
Query: 459 PNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKS 515
N +TY ++I G C G+ D A ++F M ++ PD +N ++ G N + K+
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKA 417
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 164/309 (53%), Gaps = 2/309 (0%)
Query: 218 TYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLM 277
+Y ++ H +N+A LF +M+ P+++ F+ ++ + K + + L + M
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 278 IQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNV 337
+G+ P N +M CL+ + A M G D+V++T+L+NGYC +
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 338 EEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTF 397
E+A+ L+ ++L G +P VVTY+TL L + + HA++LF++M N + YN
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 398 IDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGL 457
+ GLC+ G +A L + + E ++I+++ LID K+GKL A EL+ + ++ +
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289
Query: 458 LPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKSSR 517
P+V TY +I+GLC G +D+A +F ME G P+ VI+ T++ GF ++
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM- 348
Query: 518 GKLMSQMSS 526
K+ +MS
Sbjct: 349 -KIFYEMSQ 356
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 309 bits (791), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 189/570 (33%), Positives = 285/570 (50%), Gaps = 77/570 (13%)
Query: 27 TVKDGASIEKFLKERSKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLA 86
+V DG + +ER +S I I ++A+ +F M R P P + F+ LF +A
Sbjct: 30 SVSDGKGKVSY-RERLRSG----IVDIKEDDAVDLFQEMTRSRPRPRLID-FSRLFSVVA 83
Query: 87 KNKHYDTVLSLFKRLNSTGLFPDLYTHSILINC--------------------------- 119
+ K YD VL L K++ G+ +LYT SI+INC
Sbjct: 84 RTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTV 143
Query: 120 -------------RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEM 166
R+ EA L ++ G +P + T N L+NGLC G A+ L + M
Sbjct: 144 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM 203
Query: 167 ANGNGE---------FGVVCKP--------------------DTVTYNTIIDGVCKEGFV 197
+ V+CK D V Y+ IIDG+CK+G +
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL 263
Query: 198 DKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVI 257
D A LF +M+ + +++ Y +LI F +A W++ +L M+ + + P+VV FS +
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL 323
Query: 258 VDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGC 317
+D K GK+ EA L MIQ G+ P+T Y +L+DGFC +++ A + M S GC
Sbjct: 324 IDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGC 383
Query: 318 MHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALK 377
++ ++ LINGYCK +++ L L+RKM +G+ VTY+TL G E+ ++E A +
Sbjct: 384 GPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKE 443
Query: 378 LFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLC 437
LF EM V D Y +DGLC NG +ALE+F I SK ELDI Y+ +I G+C
Sbjct: 444 LFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC 503
Query: 438 KIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCV 497
K++ AW+LF SL G+ P+V TYNIMI GLC G + +A LF ME G P+
Sbjct: 504 NASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGC 563
Query: 498 IFNTIMLGFIRNNETSKSSRGKLMSQMSSC 527
+N ++ + + +KS+ KL+ ++ C
Sbjct: 564 TYNILIRAHLGEGDATKSA--KLIEEIKRC 591
Score = 244 bits (623), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 142/445 (31%), Positives = 233/445 (52%), Gaps = 12/445 (2%)
Query: 56 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHS- 114
+EAL + D M+ M P ++ ++ G K D VL L R+ TG P+ T+
Sbjct: 159 SEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL-LIDRMVETGFQPNEVTYGP 217
Query: 115 -ILINCRIMEAA---ALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 170
+ + C+ + A L K+ + D Y+ +I+GLC+ G A NLF EM
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
Query: 171 GEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHAD 230
K D + Y T+I G C G D +L M I P+VV +++LI CF
Sbjct: 278 ------FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEG 331
Query: 231 DWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYN 290
EA+ L +M+ +G+ P+ VT++ ++D CK ++++A+ +LDLM+ G PN +N
Sbjct: 332 KLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFN 391
Query: 291 TLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPK 350
L++G+C ++ ELF M G + D V+Y TLI G+C+ +E A L+++M+ +
Sbjct: 392 ILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR 451
Query: 351 GIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEA 410
+RP +V+Y L GL + + E AL++F++++ + + D IYN I G+C V +A
Sbjct: 452 RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 511
Query: 411 LELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHG 470
+LFC++ + D+ +Y+ +I GLCK G L A LF+ + G PN TYNI+I
Sbjct: 512 WDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA 571
Query: 471 LCNDGQMDKAHDLFLDMEAKGVEPD 495
+G K+ L +++ G D
Sbjct: 572 HLGEGDATKSAKLIEEIKRCGFSVD 596
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 304 bits (778), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 161/436 (36%), Positives = 248/436 (56%), Gaps = 11/436 (2%)
Query: 73 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINC-----RIMEAAAL 127
P +F+ L ++L R+ PDL T S LIN R+ EA L
Sbjct: 138 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 197
Query: 128 FTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTI 187
++ +G +PD TY ++N LC++G++ +AL+LF +M N K V Y+ +
Sbjct: 198 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN------IKASVVQYSIV 251
Query: 188 IDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGV 247
ID +CK+G D A+ LF +M+ + I +VVTY+SLI + W++ ++ +M+ + +
Sbjct: 252 IDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI 311
Query: 248 HPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKE 307
P+VVTFS ++D K GK+ EA L + MI G+ P+T YN+L+DGFC ++ A +
Sbjct: 312 IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQ 371
Query: 308 LFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLF 367
+F M S GC D+V+Y+ LIN YCK K V++ + L+R++ KG+ P +TY+TL LG
Sbjct: 372 MFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFC 431
Query: 368 EVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDII 427
+ ++ A +LF EM V Y +DGLC NG + +ALE+F + S+ L I
Sbjct: 432 QSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIG 491
Query: 428 SYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDM 487
Y+ +I G+C K++ AW LF SLS G+ P+VVTYN+MI GLC G + +A LF M
Sbjct: 492 IYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKM 551
Query: 488 EAKGVEPDCVIFNTIM 503
+ G PD +N ++
Sbjct: 552 KEDGCTPDDFTYNILI 567
Score = 238 bits (607), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 139/463 (30%), Positives = 238/463 (51%), Gaps = 37/463 (7%)
Query: 53 ITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYT 112
I N+A+ +F+ M++ P P P+ FN L +A+ K YD VL K + G+ D+YT
Sbjct: 49 IKVNDAIDLFESMIQSRPLPTPID-FNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYT 107
Query: 113 HSILINCRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE 172
+I+ IN CR + A ++
Sbjct: 108 MTIM------------------------------INCYCRKKKLLFAFSVLGR------A 131
Query: 173 FGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDW 232
+ + +PDT+T++T+++G C EG V +A+ L +M + P++VT ++LI+
Sbjct: 132 WKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRV 191
Query: 233 NEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTL 292
+EA L +M++ G P+ VT+ +++ LCK+G A L M + + + Y+ +
Sbjct: 192 SEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIV 251
Query: 293 MDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGI 352
+D C G + A LF ME G DVV+Y++LI G C ++ + R+M+ + I
Sbjct: 252 IDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI 311
Query: 353 RPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALE 412
P VVT+S L + ++ A +L++EM +A DT YN+ IDG CK + EA +
Sbjct: 312 IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQ 371
Query: 413 LFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLC 472
+F + + E DI++YS LI+ CK +++ LF+ +S GL+PN +TYN ++ G C
Sbjct: 372 MFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFC 431
Query: 473 NDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKS 515
G+++ A +LF +M ++GV P V + ++ G N E +K+
Sbjct: 432 QSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKA 474
Score = 210 bits (534), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 137/437 (31%), Positives = 225/437 (51%), Gaps = 16/437 (3%)
Query: 56 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSI 115
+EAL + D M+ P V+ + + L K+ + L LF+++ + + +SI
Sbjct: 192 SEALVLIDRMVEYGFQPDEVT-YGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI 250
Query: 116 LIN--CR---IMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 170
+I+ C+ +A +LF ++ + G + DV TY++LI GLC G + EM N
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310
Query: 171 GEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHAD 230
PD VT++ +ID KEG + +A EL+ +M I P+ +TYNSLI F +
Sbjct: 311 ------IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 364
Query: 231 DWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYN 290
+EA ++F M+ +G P++VT+S++++ CK ++++ RL + G+ PNT YN
Sbjct: 365 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 424
Query: 291 TLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPK 350
TL+ GFC +G++N AKELF M S G VV+Y L++G C + +AL ++ KM
Sbjct: 425 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 484
Query: 351 GIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEA 410
+ + Y+ + G+ +V+ A LF + V D YN I GLCK G + EA
Sbjct: 485 RMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 544
Query: 411 LELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHG 470
LF + D +Y+ LI L ++ EL + + G + T ++I
Sbjct: 545 DMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDM 604
Query: 471 LCNDGQMDKAHDLFLDM 487
L +D ++DK+ FLDM
Sbjct: 605 L-SDRRLDKS---FLDM 617
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 300 bits (768), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 172/507 (33%), Positives = 278/507 (54%), Gaps = 38/507 (7%)
Query: 56 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSI 115
++A+ +F M++ P P V F+ L +AK +D V+SL +++ + G+ +LYT+SI
Sbjct: 57 DDAIGLFGDMVKSRPFPSIVE-FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 116 LIN--CRIME---AAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 170
IN CR + A A+ K+ G P + T N+L+NG C A+ L ++M
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 171 GEFGVV-----------------------------CKPDTVTYNTIIDGVCKEGFVDKAM 201
+ V C+PD VTY +I+G+CK G D A+
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 202 ELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDEL 261
L +M+ I +VV YN++I ++A LF KM +G+ P+V T++ ++ L
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 262 CKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSM-ESNGCMHD 320
C G+ +ASRLL M++ ++P+ +N L+D F G++ A++L+ M +S C D
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355
Query: 321 VVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFD 380
VV+Y TLI G+CK K VEE + ++R+M +G+ VTY+TL G F+ ++A +F
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 415
Query: 381 EMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIG 440
+M + V D YN +DGLC NG V AL +F + +LDI++Y+ +I+ LCK G
Sbjct: 416 QMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAG 475
Query: 441 KLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFN 500
K+E W+LF SLS G+ PNVVTY M+ G C G ++A LF++M+ G P+ +N
Sbjct: 476 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYN 535
Query: 501 TIMLGFIRNNETSKSSRGKLMSQMSSC 527
T++ +R+ + + S+ +L+ +M SC
Sbjct: 536 TLIRARLRDGDEAASA--ELIKEMRSC 560
Score = 280 bits (716), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 155/451 (34%), Positives = 246/451 (54%), Gaps = 13/451 (2%)
Query: 58 ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYT----- 112
AL I M+++ P V+ ++L G N+ + V +L ++ G PD T
Sbjct: 129 ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV-ALVDQMVEMGYQPDTVTFTTLV 187
Query: 113 HSILINCRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE 172
H + + + EA AL ++ V GC+PD+ TY +INGLC+ G +ALNL +M G E
Sbjct: 188 HGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE 247
Query: 173 FGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDW 232
D V YNTIIDG+CK +D A +LF +M+ + I P+V TYN LI C + W
Sbjct: 248 ------ADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRW 301
Query: 233 NEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIG-VHPNTFVYNT 291
++A RL M+++ ++P++V F+ ++D K GK+ EA +L D M++ P+ YNT
Sbjct: 302 SDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNT 361
Query: 292 LMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKG 351
L+ GFC RV E+F M G + + V+YTTLI+G+ + ++ + A ++++M+ G
Sbjct: 362 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 421
Query: 352 IRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEAL 411
+ P ++TY+ L GL VE AL +F+ MQ D+ D Y T I+ LCK G V +
Sbjct: 422 VHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGW 481
Query: 412 ELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGL 471
+LFC++ + ++++Y+ ++ G C+ G E A LF + G LPN TYN +I
Sbjct: 482 DLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRAR 541
Query: 472 CNDGQMDKAHDLFLDMEAKGVEPDCVIFNTI 502
DG + +L +M + G D F +
Sbjct: 542 LRDGDEAASAELIKEMRSCGFAGDASTFGLV 572
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 175/339 (51%), Gaps = 14/339 (4%)
Query: 78 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINC-----RIMEAAALFTKLR 132
+N + L K KH D LF ++ + G+ PD++T++ LI+C R +A+ L + +
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 133 VFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVC 192
PD+ +N LI+ + G + A L++EM C PD V YNT+I G C
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH-----CFPDVVAYNTLIKGFC 367
Query: 193 KEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVV 252
K V++ ME+F +M + N VTY +LIH F A D + A+ +F +M+ GVHP+++
Sbjct: 368 KYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIM 427
Query: 253 TFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSM 312
T+++++D LC NG +E A + + M + + + Y T+++ C G+V +LF S+
Sbjct: 428 TYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSL 487
Query: 313 ESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQV 372
G +VV+YTT+++G+C+ EEA L+ +M G P TY+TL
Sbjct: 488 SLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDE 547
Query: 373 EHALKLFDEMQHNDVAADTYIY----NTFIDGLCKNGFV 407
+ +L EM+ A D + N DG F+
Sbjct: 548 AASAELIKEMRSCGFAGDASTFGLVTNMLHDGRLDKSFL 586
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 169/313 (53%), Gaps = 1/313 (0%)
Query: 197 VDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSV 256
+D A+ LF M P++V ++ L+ + + ++ L +M + G+ N+ T+S+
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 257 IVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNG 316
++ C+ ++ A +L M+++G P+ N+L++GFC R++ A L M G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 317 CMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHAL 376
D V++TTL++G + EA+ L +M+ KG +P +VTY + GL + + + AL
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 377 KLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGL 436
L ++M+ + AD IYNT IDGLCK + +A +LF + + D+ +Y+ LI L
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 437 CKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDM-EAKGVEPD 495
C G+ A L + + P++V +N +I +G++ +A L+ +M ++K PD
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355
Query: 496 CVIFNTIMLGFIR 508
V +NT++ GF +
Sbjct: 356 VVAYNTLIKGFCK 368
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 131/287 (45%), Gaps = 35/287 (12%)
Query: 266 KMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYT 325
K+++A L M++ P+ ++ L+ + + L M++ G H++ +Y+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 326 TLI-----------------------------------NGYCKTKNVEEALNLYRKMLPK 350
I NG+C + EA+ L +M+
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 351 GIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEA 410
G +P VT++TL GLF+ ++ A+ L + M D Y I+GLCK G A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 411 LELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHG 470
L L + K E D++ Y+ +IDGLCK ++ A++LF + G+ P+V TYN +I
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 471 LCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKSSR 517
LCN G+ A L DM K + PD V FN ++ F++ + ++ +
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEK 341
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 297 bits (761), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 173/451 (38%), Positives = 260/451 (57%), Gaps = 18/451 (3%)
Query: 81 LFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINC-----RIMEAAALFTKLRVFG 135
LFG + + + V +LF ++ GL P + T + LIN R++EAAAL K+ G
Sbjct: 198 LFGYMVETGFLEAV-ALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 136 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEG 195
DV TY T++NG+C+ G T ALNL +M + KPD V Y+ IID +CK+G
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH------IKPDVVIYSAIIDRLCKDG 310
Query: 196 FVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFS 255
A LF +M ++ I PNV TYN +I F W++A+RL M+++ ++P+V+TF+
Sbjct: 311 HHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFN 370
Query: 256 VIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESN 315
++ K GK+ EA +L D M+ + P+T YN+++ GFC R + AK +F M S
Sbjct: 371 ALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP 430
Query: 316 GCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHA 375
DVV++ T+I+ YC+ K V+E + L R++ +G+ TY+TL G EV + A
Sbjct: 431 ----DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAA 486
Query: 376 LKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDG 435
LF EM + V DT N + G C+N + EALELF I SK +LD ++Y+ +I G
Sbjct: 487 QDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHG 546
Query: 436 LCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPD 495
+CK K++ AW+LF SL G+ P+V TYN+MI G C + A+ LF M+ G EPD
Sbjct: 547 MCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPD 606
Query: 496 CVIFNTIMLGFIRNNETSKSSRGKLMSQMSS 526
+NT++ G ++ E KS +L+S+M S
Sbjct: 607 NSTYNTLIRGCLKAGEIDKSI--ELISEMRS 635
Score = 192 bits (487), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 140/471 (29%), Positives = 226/471 (47%), Gaps = 55/471 (11%)
Query: 57 EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSIL 116
EA+ +FD M+ + +P V +FN L L +L ++ GL D+ T+ +
Sbjct: 209 EAVALFDQMVEIGLTPV-VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTI 267
Query: 117 IN--CRIME---AAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 171
+N C++ + A L +K+ +PDV Y+ +I+ LC+ GH A LF EM
Sbjct: 268 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML---- 323
Query: 172 EFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNV--------------- 216
E G+ P+ TYN +IDG C G A L M + INP+V
Sbjct: 324 EKGIA--PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 217 --------------------VTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSV 256
VTYNS+I+ F + +++AK +F D P+VVTF+
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF----DLMASPDVVTFNT 437
Query: 257 IVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNG 316
I+D C+ +++E +LL + + G+ NT YNTL+ GFC +N A++LF M S+G
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497
Query: 317 CMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHAL 376
D ++ L+ G+C+ + +EEAL L+ + I V Y+ + G+ + +V+ A
Sbjct: 498 VCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 557
Query: 377 KLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGL 436
LF + + V D YN I G C + +A LF + ++ +E D +Y+ LI G
Sbjct: 558 DLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGC 617
Query: 437 CKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDM 487
K G+++ + EL + G + T M+ L DG++DK+ F DM
Sbjct: 618 LKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLDKS---FSDM 664
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/343 (32%), Positives = 166/343 (48%), Gaps = 19/343 (5%)
Query: 181 TVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFI 240
V N +I + D A+ L+ +M+ I N+ ++N LI CF + + F
Sbjct: 106 AVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFG 165
Query: 241 KMMDQGVHPNVVTFSVIVDELCKNGKME---------------EASRLLDLMIQIGVHPN 285
K+ G P+VVTF+ ++ LC ++ EA L D M++IG+ P
Sbjct: 166 KLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPV 225
Query: 286 TFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYR 345
+NTL++G CL GRV A L M G DVV+Y T++NG CK + + ALNL
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285
Query: 346 KMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNG 405
KM I+P VV YS + L + A LF EM +A + + YN IDG C G
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345
Query: 406 FVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYN 465
+A L + + D+++++ LI K GKL A +L + + P+ VTYN
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405
Query: 466 IMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIR 508
MI+G C + D A +F D+ A PD V FNTI+ + R
Sbjct: 406 SMIYGFCKHNRFDDAKHMF-DLMA---SPDVVTFNTIIDVYCR 444
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 154/344 (44%), Gaps = 31/344 (9%)
Query: 197 VDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSV 256
+D A++ F M V N +I F + + A L+ KM + + N+ +F++
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 257 IVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNG 316
++ C K+ + + ++G P+ +NTL+ G CL R++ A LF
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF------- 199
Query: 317 CMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHAL 376
GY EA+ L+ +M+ G+ P V+T++TL GL +V A
Sbjct: 200 -------------GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAA 246
Query: 377 KLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGL 436
L ++M + D Y T ++G+CK G AL L + + + D++ YS +ID L
Sbjct: 247 ALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL 306
Query: 437 CKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDC 496
CK G A LF + G+ PNV TYN MI G C+ G+ A L DM + + PD
Sbjct: 307 CKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDV 366
Query: 497 VIFNTIMLGFIRNNETSKSSRGKLMSQMSSCWSM---CFQPKTL 537
+ FN ++ ++ GKL C M C P T+
Sbjct: 367 LTFNALI--------SASVKEGKLFEAEKLCDEMLHRCIFPDTV 402
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 122/267 (45%), Gaps = 42/267 (15%)
Query: 335 KNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIY 394
K++++A++ + M+ T V + + +++ + A+ L+ +M+ + + Y +
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 395 NTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLC----------------K 438
N I C + +L F + ++ D+++++ L+ GLC +
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 439 IGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVI 498
G LE A LF + +GL P V+T+N +I+GLC +G++ +A L M KG+ D V
Sbjct: 205 TGFLE-AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 499 FNTIMLGFIRNNETSKSSRGKLMSQMSSCWSMCFQPKTLICSISI--------------- 543
+ TI+ G + +T S L+S+M +P +I S I
Sbjct: 264 YGTIVNGMCKMGDT--KSALNLLSKMEETH---IKPDVVIYSAIIDRLCKDGHHSDAQYL 318
Query: 544 ---MLQKDMSPGDTMFSTALLMDPDCS 567
ML+K ++P +F+ ++D CS
Sbjct: 319 FSEMLEKGIAP--NVFTYNCMIDGFCS 343
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 293 bits (751), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 168/463 (36%), Positives = 267/463 (57%), Gaps = 19/463 (4%)
Query: 56 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSI 115
NEAL +F +M+ P P + F L +AK K +D V++L L G+ DLYT ++
Sbjct: 54 NEALDLFTHMVESRPLPS-IIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNL 112
Query: 116 LINCRIME-----AAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 170
L+NC A++ K+ G EPD+ T+ +LING C A+++ +M
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV--- 169
Query: 171 GEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHAD 230
E G+ KPD V Y TIID +CK G V+ A+ LF QM++ I P+VV Y SL++ ++
Sbjct: 170 -EMGI--KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSG 226
Query: 231 DWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYN 290
W +A L M + + P+V+TF+ ++D K GK +A L + MI++ + PN F Y
Sbjct: 227 RWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYT 286
Query: 291 TLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPK 350
+L++GFC+ G V+ A+++F ME+ GC DVV+YT+LING+CK K V++A+ ++ +M K
Sbjct: 287 SLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQK 346
Query: 351 GIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEA 410
G+ +TY+TL G +V + A ++F M V + YN + LC NG V +A
Sbjct: 347 GLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKA 406
Query: 411 LELFCAIGNSKYELD-----IISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYN 465
L +F + K E+D I +Y+ L+ GLC GKLE A +F+ + + + ++TY
Sbjct: 407 LMIFEDM--QKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYT 464
Query: 466 IMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIR 508
I+I G+C G++ A +LF + +KGV+P+ V + T++ G R
Sbjct: 465 IIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFR 507
Score = 192 bits (487), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 189/357 (52%), Gaps = 6/357 (1%)
Query: 159 ALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVT 218
AL+LF M P + + +++ + K D + L ++ ++ ++ T
Sbjct: 56 ALDLFTHMVESRP------LPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYT 109
Query: 219 YNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMI 278
N L++CF + A KMM G P++VTF+ +++ C +MEEA +++ M+
Sbjct: 110 CNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV 169
Query: 279 QIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVE 338
++G+ P+ +Y T++D C G VN+A LF ME+ G DVV YT+L+NG C +
Sbjct: 170 EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR 229
Query: 339 EALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFI 398
+A +L R M + I+P V+T++ L + + A +L++EM +A + + Y + I
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Query: 399 DGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLL 458
+G C G V EA ++F + D+++Y+ LI+G CK K++ A ++F +S+ GL
Sbjct: 290 NGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT 349
Query: 459 PNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKS 515
N +TY +I G G+ + A ++F M ++GV P+ +N ++ N + K+
Sbjct: 350 GNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKA 406
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 176/341 (51%), Gaps = 15/341 (4%)
Query: 56 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSI 115
N AL +FD M + P V + L L + + SL + + + PD+ T +
Sbjct: 194 NYALSLFDQM-ENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNA 252
Query: 116 LINC-----RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 170
LI+ + ++A L+ ++ P++FTY +LING C G A +F M
Sbjct: 253 LIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKG 312
Query: 171 GEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHAD 230
C PD V Y ++I+G CK VD AM++F +M + + N +TY +LI F
Sbjct: 313 ------CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVG 366
Query: 231 DWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQI---GVHPNTF 287
N A+ +F M+ +GV PN+ T++V++ LC NGK+++A + + M + GV PN +
Sbjct: 367 KPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIW 426
Query: 288 VYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKM 347
YN L+ G C G++ A +F M +++YT +I G CK V+ A+NL+ +
Sbjct: 427 TYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSL 486
Query: 348 LPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVA 388
KG++P VVTY+T+ GLF A LF +M+ + V+
Sbjct: 487 PSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 162/290 (55%)
Query: 219 YNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMI 278
Y ++ H+ +NEA LF M++ P+++ F+ +++ + K K + L D +
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 279 QIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVE 338
+GV + + N LM+ FC + + A M G D+V++T+LING+C +E
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 339 EALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFI 398
EA+++ +M+ GI+P VV Y+T+ L + V +AL LFD+M++ + D +Y + +
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 399 DGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLL 458
+GLC +G +A L + K + D+I+++ LID K GK A EL+ + R+ +
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA 279
Query: 459 PNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIR 508
PN+ TY +I+G C +G +D+A +F ME KG PD V + +++ GF +
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCK 329
Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 93/184 (50%)
Query: 323 SYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEM 382
+Y ++ + EAL+L+ M+ P+++ ++ L + ++ + + + L D +
Sbjct: 39 NYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHL 98
Query: 383 QHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKL 442
Q V+ D Y N ++ C++ A + +E DI++++ LI+G C ++
Sbjct: 99 QIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRM 158
Query: 443 ETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTI 502
E A + + +G+ P+VV Y +I LC +G ++ A LF ME G+ PD V++ ++
Sbjct: 159 EEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSL 218
Query: 503 MLGF 506
+ G
Sbjct: 219 VNGL 222
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 290 bits (741), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 154/454 (33%), Positives = 261/454 (57%), Gaps = 12/454 (2%)
Query: 47 QGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGL 106
+ I + +++L +F +M++ P P ++ F+ L ++K K YD V+ L++++ G+
Sbjct: 54 RNGIRFMKLDDSLDLFFHMVQCRP-LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGI 112
Query: 107 FPDLYTHSILINC-----RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALN 161
+L T +IL+NC ++ A + K+ G EP + T+ +L+NG CR AL
Sbjct: 113 PHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALY 172
Query: 162 LFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNS 221
+F++M G+ KP+ V YNTIIDG+CK VD A++L +M+ + I P+VVTYNS
Sbjct: 173 MFDQMV------GMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNS 226
Query: 222 LIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIG 281
LI + W++A R+ M + ++P+V TF+ ++D K G++ EA + MI+
Sbjct: 227 LISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRS 286
Query: 282 VHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEAL 341
+ P+ Y+ L+ G C+ R++ A+E+F M S GC DVV+Y+ LINGYCK+K VE +
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGM 346
Query: 342 NLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGL 401
L+ +M +G+ VTY+ L G ++ A ++F M V + YN + GL
Sbjct: 347 KLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGL 406
Query: 402 CKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNV 461
C NG + +AL + + + + DI++Y+ +I G+CK G++ AW+++ SL+ GL+P++
Sbjct: 407 CDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDI 466
Query: 462 VTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPD 495
TY M+ GL G +A LF M+ G+ P+
Sbjct: 467 WTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 179/337 (53%)
Query: 179 PDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRL 238
P ++ ++ + K D + L+ QM+ I N+ T N L++CF + A
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 239 FIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCL 298
KM+ G P++VTF +++ C+ ++ +A + D M+ +G PN +YNT++DG C
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 299 TGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVT 358
+ +V++A +L ME +G DVV+Y +LI+G C + +A + M + I P V T
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 359 YSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIG 418
++ L + +V A + ++EM + D Y+ I GLC + EA E+F +
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 419 NSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMD 478
+ D+++YS LI+G CK K+E +LF +S+ G++ N VTY I+I G C G+++
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378
Query: 479 KAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKS 515
A ++F M GV P+ + +N ++ G N + K+
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKA 415
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 120/260 (46%), Gaps = 39/260 (15%)
Query: 260 ELCKNG----KMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESN 315
E+ +NG K++++ L M+Q P+ ++ L+ + + L+ M+
Sbjct: 51 EMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQML 110
Query: 316 GCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHA 375
G H++ + L+N +C+ + AL+ KM+ G P++VT+ +L
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSL------------- 157
Query: 376 LKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDG 435
++G C+ V +AL +F + Y+ +++ Y+ +IDG
Sbjct: 158 ----------------------LNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDG 195
Query: 436 LCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPD 495
LCK +++ A +L + + G+ P+VVTYN +I GLC+ G+ A + M + + PD
Sbjct: 196 LCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPD 255
Query: 496 CVIFNTIMLGFIRNNETSKS 515
FN ++ ++ S++
Sbjct: 256 VFTFNALIDACVKEGRVSEA 275
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 99/210 (47%), Gaps = 20/210 (9%)
Query: 328 INGYCKTKNVEEALNLYRKMLPKGIR--------------------PTVVTYSTLFLGLF 367
I G+C ++ + YR+ML GIR P++ +S L +
Sbjct: 33 ICGFCFSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAIS 92
Query: 368 EVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDII 427
++ + + + L+++MQ + + N ++ C+ + AL + +E I+
Sbjct: 93 KMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIV 152
Query: 428 SYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDM 487
++ L++G C+ ++ A +F + +G PNVV YN +I GLC Q+D A DL M
Sbjct: 153 TFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212
Query: 488 EAKGVEPDCVIFNTIMLGFIRNNETSKSSR 517
E G+ PD V +N+++ G + S ++R
Sbjct: 213 EKDGIGPDVVTYNSLISGLCSSGRWSDATR 242
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 290 bits (741), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 174/491 (35%), Positives = 277/491 (56%), Gaps = 20/491 (4%)
Query: 31 GASIEKFLKERSKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKH 90
GAS +ER ++ +++ I ++A +F ML+ P P V F + +AK
Sbjct: 40 GASHHHHYRERLRN----ELHCIKFDDAFSLFCEMLQSRPIPSIVD-FTRVLTVIAKMNK 94
Query: 91 YDTVLSLFKRLNSTGLFPDLYTHSILINC-----RIMEAAALFTKLRVFGCEPDVFTYNT 145
+D V+ L+ ++ + G+ DLY+ +ILI+C R+ A AL K+ G P + T +
Sbjct: 95 FDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGS 154
Query: 146 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFL 205
L+NG C+ A++L + M FG V P+ V YNT+I+G+CK ++ A+E+F
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMDG----FGFV--PNVVIYNTVINGLCKNRDLNNALEVFY 208
Query: 206 QMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNG 265
M+ + I + VTYN+LI S++ W +A RL M+ + + PNV+ F+ ++D K G
Sbjct: 209 CMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEG 268
Query: 266 KMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYT 325
+ EA L MI+ V PN F YN+L++GFC+ G + AK +F M S GC DVV+Y
Sbjct: 269 NLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYN 328
Query: 326 TLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHN 385
TLI G+CK+K VE+ + L+ +M +G+ TY+TL G + ++ A K+F+ M
Sbjct: 329 TLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDC 388
Query: 386 DVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETA 445
V+ D YN +D LC NG + +AL + + S+ ++DII+Y+ +I GLC+ KL+ A
Sbjct: 389 GVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEA 448
Query: 446 WELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLG 505
W LF+SL+R G+ P+ + Y MI GLC G +A L M+ G P I++ +
Sbjct: 449 WCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETL-- 506
Query: 506 FIRNNETSKSS 516
R++ TS S+
Sbjct: 507 --RDHYTSLSA 515
Score = 82.8 bits (203), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 97/180 (53%)
Query: 338 EEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTF 397
++A +L+ +ML P++V ++ + + ++++ + + L+ +M++ ++ D Y +
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 398 IDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGL 457
I C+ + AL L + + I++ L++G C+ + + A L S+ G
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180
Query: 458 LPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKSSR 517
+PNVV YN +I+GLC + ++ A ++F ME KG+ D V +NT++ G + + ++R
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 287 bits (735), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 169/478 (35%), Positives = 264/478 (55%), Gaps = 17/478 (3%)
Query: 23 SLRLTVKDGASIEKFLKERSKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILF 82
SLR+ S +ER +S ++ I N+AL +F M HP P V F+ L
Sbjct: 32 SLRICNSRAFSGRSDYRERLRSG----LHSIKFNDALTLFCDMAESHPLPSIVD-FSRLL 86
Query: 83 GCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINC-----RIMEAAALFTKLRVFGCE 137
+AK Y+ V+SLF+ L G+ DLY+ + LI+C R+ A + K+ G E
Sbjct: 87 IAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFE 146
Query: 138 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFV 197
P + T+ +L+NG C A++L +++ G+ +P+ V YNTIID +C++G V
Sbjct: 147 PSIVTFGSLVNGFCHVNRFYEAMSLVDQIV------GLGYEPNVVIYNTIIDSLCEKGQV 200
Query: 198 DKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVI 257
+ A+++ MK I P+VVTYNSLI H+ W + R+ MM G+ P+V+TFS +
Sbjct: 201 NTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSAL 260
Query: 258 VDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGC 317
+D K G++ EA + + MIQ V+PN YN+L++G C+ G ++ AK++ + S G
Sbjct: 261 IDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGF 320
Query: 318 MHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALK 377
+ V+Y TLINGYCK K V++ + + M G+ TY+TL+ G + + A K
Sbjct: 321 FPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEK 380
Query: 378 LFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLC 437
+ M V D Y +N +DGLC +G + +AL + SK + II+Y+ +I GLC
Sbjct: 381 VLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLC 440
Query: 438 KIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAK-GVEP 494
K K+E AW LF SL+ G+ P+V+TY M+ GL +AH+L+ M+ + G+ P
Sbjct: 441 KADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 168 bits (426), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 194/399 (48%), Gaps = 10/399 (2%)
Query: 121 IMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTG-HTIV---ALNLFEEMANGNGEFGVV 176
++E L T L + C F+ + R+G H+I AL LF +MA +
Sbjct: 21 LLEKGNLVTALSLRICNSRAFSGRSDYRERLRSGLHSIKFNDALTLFCDMAESHPL---- 76
Query: 177 CKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAK 236
P V ++ ++ + K + + LF ++ I+ ++ ++ +LI CF + A
Sbjct: 77 --PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLAL 134
Query: 237 RLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGF 296
KMM G P++VTF +V+ C + EA L+D ++ +G PN +YNT++D
Sbjct: 135 SCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSL 194
Query: 297 CLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTV 356
C G+VN A ++ M+ G DVV+Y +LI + + + M+ GI P V
Sbjct: 195 CEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDV 254
Query: 357 VTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCA 416
+T+S L + Q+ A K ++EM V + YN+ I+GLC +G + EA ++
Sbjct: 255 ITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNV 314
Query: 417 IGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQ 476
+ + + + ++Y+ LI+G CK +++ ++ +SR G+ + TYN + G C G+
Sbjct: 315 LVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGK 374
Query: 477 MDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKS 515
A + M + GV PD FN ++ G + + K+
Sbjct: 375 FSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKA 413
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 200/433 (46%), Gaps = 45/433 (10%)
Query: 113 HSILINCRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE 172
HSI N +A LF + P + ++ L+ + + ++LF +
Sbjct: 56 HSIKFN----DALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLE----M 107
Query: 173 FGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDW 232
G+ D ++ T+ID C+ + A+ +M P++VT+ SL++ F H + +
Sbjct: 108 LGI--SHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRF 165
Query: 233 NEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTL 292
EA L +++ G PNVV ++ I+D LC+ G++ A +L M ++G+ P+ YN+L
Sbjct: 166 YEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSL 225
Query: 293 MDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGI 352
+ +G + + M G DV++++ LI+ Y K + EA Y +M+ + +
Sbjct: 226 ITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSV 285
Query: 353 RPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALE 412
P +VTY++L GL ++ A K+ + + + YNT I+G CK V + ++
Sbjct: 286 NPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMK 345
Query: 413 LFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLC 472
+ C + + D +Y+ L G C+ GK A ++ + G+ P++ T+NI++ GLC
Sbjct: 346 ILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLC 405
Query: 473 NDGQM--------------------------------DKAHD---LFLDMEAKGVEPDCV 497
+ G++ DK D LF + KGV PD +
Sbjct: 406 DHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVI 465
Query: 498 IFNTIMLGFIRNN 510
+ T+M+G R
Sbjct: 466 TYITMMIGLRRKR 478
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 165/328 (50%), Gaps = 2/328 (0%)
Query: 200 AMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVD 259
A+ LF M + + P++V ++ L+ + + + LF + G+ ++ +F+ ++D
Sbjct: 63 ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLID 122
Query: 260 ELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMH 319
C+ ++ A L M+++G P+ + +L++GFC R A L + G
Sbjct: 123 CFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEP 182
Query: 320 DVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLF 379
+VV Y T+I+ C+ V AL++ + M GIRP VVTY++L LF + ++
Sbjct: 183 NVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARIL 242
Query: 380 DEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKI 439
+M ++ D ++ ID K G +LEA + + + +I++Y+ LI+GLC
Sbjct: 243 SDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIH 302
Query: 440 GKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIF 499
G L+ A ++ L G PN VTYN +I+G C ++D + M GV+ D +
Sbjct: 303 GLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTY 362
Query: 500 NTIMLGFIRNNETSKSSRGKLMSQMSSC 527
NT+ G+ + + S + K++ +M SC
Sbjct: 363 NTLYQGYCQAGKFSAAE--KVLGRMVSC 388
Score = 92.8 bits (229), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 90/179 (50%)
Query: 339 EALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFI 398
+AL L+ M P++V +S L + + ++++ E + LF ++ ++ D Y + T I
Sbjct: 62 DALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLI 121
Query: 399 DGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLL 458
D C+ + AL + +E I+++ L++G C + + A L + +G
Sbjct: 122 DCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYE 181
Query: 459 PNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKSSR 517
PNVV YN +I LC GQ++ A D+ M+ G+ PD V +N+++ + S+R
Sbjct: 182 PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSAR 240
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 285 bits (730), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 162/467 (34%), Positives = 258/467 (55%), Gaps = 13/467 (2%)
Query: 31 GASIEKFLKERSKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKH 90
GA+ F R K G ++ I +A +F M+ P P V F L A +
Sbjct: 29 GAAARAFSDYREKLR-TGFLHSIRFEDAFALFFEMVHSQPLPSIVD-FTRLLTATANLRR 86
Query: 91 YDTVLSLFKRLNSTGLFPDLYTHSILINC-----RIMEAAALFTKLRVFGCEPDVFTYNT 145
Y+TV+ +++ G+ DLY+ +ILI+C R+ A ++ K+ G EP + T+ +
Sbjct: 87 YETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGS 146
Query: 146 LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFL 205
L++G C A +L M E P+ V YNT+IDG+CK G ++ A+EL
Sbjct: 147 LLHGFCLVNRIGDAFSLVILMVKSGYE------PNVVVYNTLIDGLCKNGELNIALELLN 200
Query: 206 QMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNG 265
+M+ + + +VVTYN+L+ ++ W++A R+ MM + ++P+VVTF+ ++D K G
Sbjct: 201 EMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQG 260
Query: 266 KMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYT 325
++EA L MIQ V PN YN++++G C+ GR+ AK+ F M S GC +VV+Y
Sbjct: 261 NLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYN 320
Query: 326 TLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHN 385
TLI+G+CK + V+E + L+++M +G + TY+TL G +V ++ AL +F M
Sbjct: 321 TLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSR 380
Query: 386 DVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETA 445
V D + + GLC NG + AL F + S+ + I++Y+ +I GLCK K+E A
Sbjct: 381 RVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKA 440
Query: 446 WELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGV 492
WELF L G+ P+ TY IMI GLC +G +A +L M+ +G+
Sbjct: 441 WELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 199 bits (507), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 132/458 (28%), Positives = 220/458 (48%), Gaps = 51/458 (11%)
Query: 111 YTHSILINCRIMEAAALFTKLRVFGCEPDVFTYNTLINGLC--RTGHTIVALNLFEEMAN 168
+ HSI R +A ALF ++ P + + L+ R T++ + E+
Sbjct: 46 FLHSI----RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMEL-- 99
Query: 169 GNGEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSH 228
+G+ D ++ +I C+ + A+ + +M P++VT+ SL+H F
Sbjct: 100 ----YGI--SHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCL 153
Query: 229 ADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFV 288
+ +A L I M+ G PNVV ++ ++D LCKNG++ A LL+ M + G+ +
Sbjct: 154 VNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVT 213
Query: 289 YNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKML 348
YNTL+ G C +GR + A + M DVV++T LI+ + K N++EA LY++M+
Sbjct: 214 YNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMI 273
Query: 349 -----------------------------------PKGIRPTVVTYSTLFLGLFEVHQVE 373
KG P VVTY+TL G + V+
Sbjct: 274 QSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVD 333
Query: 374 HALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLI 433
+KLF M AD + YNT I G C+ G + AL++FC + + + DII++ L+
Sbjct: 334 EGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILL 393
Query: 434 DGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVE 493
GLC G++E+A F + +V YNIMIHGLC +++KA +LF + +GV+
Sbjct: 394 HGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVK 453
Query: 494 PDCVIFNTIMLGFIRNNETSKSSRGKLMSQMSSCWSMC 531
PD + ++LG +N ++ +L+ +M +C
Sbjct: 454 PDARTYTIMILGLCKNGPRREAD--ELIRRMKEEGIIC 489
Score = 92.4 bits (228), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 96/191 (50%)
Query: 327 LINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHND 386
L G+ + E+A L+ +M+ P++V ++ L + + E + +M+
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 387 VAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAW 446
++ D Y + I C+ + AL + + YE I+++ L+ G C + ++ A+
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 447 ELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGF 506
L + + G PNVV YN +I GLC +G+++ A +L +ME KG+ D V +NT++ G
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 507 IRNNETSKSSR 517
+ S ++R
Sbjct: 222 CYSGRWSDAAR 232
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 273 bits (699), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 152/478 (31%), Positives = 253/478 (52%), Gaps = 19/478 (3%)
Query: 44 SSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNS 103
SSGQ P EA+ M R P V ++++L L KN +F +
Sbjct: 278 SSGQ-------PKEAIGFLKKM-RSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTK 329
Query: 104 TGLFPDLYTHSILINC-----RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIV 158
GL P++ T+ L+ ++E L + G PD + ++ LI + G
Sbjct: 330 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQ 389
Query: 159 ALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVT 218
A+ +F +M P+ VTY +I +CK G V+ AM F QM DE ++P +
Sbjct: 390 AMLVFSKMRQQG------LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIV 443
Query: 219 YNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMI 278
YNSLIH + W A+ L ++M+D+G+ N + F+ I+D CK G++ E+ +L +LM+
Sbjct: 444 YNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMV 503
Query: 279 QIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVE 338
+IGV PN YNTL++G+CL G+++ A +L M S G + V+Y+TLINGYCK +E
Sbjct: 504 RIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRME 563
Query: 339 EALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFI 398
+AL L+++M G+ P ++TY+ + GLF+ + A +L+ + + + YN +
Sbjct: 564 DALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIIL 623
Query: 399 DGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLL 458
GLCKN +AL++F + +L+ +++ +ID L K+G+ + A +LF + S GL+
Sbjct: 624 HGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLV 683
Query: 459 PNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKSS 516
PN TY +M + G +++ LFL ME G D + N I+ ++ E +++
Sbjct: 684 PNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAG 741
Score = 256 bits (655), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 151/479 (31%), Positives = 252/479 (52%), Gaps = 49/479 (10%)
Query: 80 ILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINC-----RIMEAAALFTKL--- 131
+L G A + D + + +R+ G P++++++IL+ R EA L +
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADD 187
Query: 132 RVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGV 191
R G PDV +Y T+ING + G + A + + EM + G++ PD VTYN+II +
Sbjct: 188 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEML----DRGIL--PDVVTYNSIIAAL 241
Query: 192 CKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNV 251
CK +DKAME+ M + P+ +TYNS++H + + EA KM GV P+V
Sbjct: 242 CKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDV 301
Query: 252 VTFSVIVDELCKNGKMEEASR-----------------------------------LLDL 276
VT+S+++D LCKNG+ EA + LLDL
Sbjct: 302 VTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL 361
Query: 277 MIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKN 336
M++ G+HP+ +V++ L+ + G+V+ A +F M G + V+Y +I CK+
Sbjct: 362 MVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGR 421
Query: 337 VEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNT 396
VE+A+ + +M+ +G+ P + Y++L GL ++ E A +L EM + +T +N+
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 481
Query: 397 FIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVG 456
ID CK G V+E+ +LF + + ++I+Y+ LI+G C GK++ A +L + VG
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541
Query: 457 LLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKS 515
L PN VTY+ +I+G C +M+ A LF +ME+ GV PD + +N I+ G + T+ +
Sbjct: 542 LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAA 600
Score = 216 bits (550), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 134/458 (29%), Positives = 230/458 (50%), Gaps = 18/458 (3%)
Query: 57 EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTG---LFPDLYTH 113
+A +FD +LR + N +A++ V S + R+ G + PDL T+
Sbjct: 33 DARHVFDELLR-RGRGASIYGLNRALADVARDSPAAAV-SRYNRMARAGADEVTPDLCTY 90
Query: 114 SILINC-----RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMAN 168
ILI C R+ A + G D + L+ GLC T A+++
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150
Query: 169 GNGEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENIN---PNVVTYNSLIHC 225
E G C P+ +YN ++ G+C E +A+EL M D+ P+VV+Y ++I+
Sbjct: 151 ---ELG--CIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVING 205
Query: 226 FSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPN 285
F D ++A + +M+D+G+ P+VVT++ I+ LCK M++A +L+ M++ GV P+
Sbjct: 206 FFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPD 265
Query: 286 TFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYR 345
YN+++ G+C +G+ A M S+G DVV+Y+ L++ CK EA ++
Sbjct: 266 CMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFD 325
Query: 346 KMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNG 405
M +G++P + TY TL G + L D M N + D Y+++ I K G
Sbjct: 326 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQG 385
Query: 406 FVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYN 465
V +A+ +F + + ++Y +I LCK G++E A F+ + GL P + YN
Sbjct: 386 KVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYN 445
Query: 466 IMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIM 503
+IHGLC + ++A +L L+M +G+ + + FN+I+
Sbjct: 446 SLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 483
Score = 166 bits (420), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 185/386 (47%), Gaps = 18/386 (4%)
Query: 138 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP----DTVTYNTIIDGVCK 193
PD+ TY LI CR G L+L G G V K D + + ++ G+C
Sbjct: 85 PDLCTYGILIGCCCRAGR----LDL------GFAALGNVIKKGFRVDAIAFTPLLKGLCA 134
Query: 194 EGFVDKAMELFLQ-MKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQ---GVHP 249
+ AM++ L+ M + PNV +YN L+ + EA L M D G P
Sbjct: 135 DKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPP 194
Query: 250 NVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELF 309
+VV+++ +++ K G ++A M+ G+ P+ YN+++ C ++ A E+
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVL 254
Query: 310 VSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEV 369
+M NG M D ++Y ++++GYC + +EA+ +KM G+ P VVTYS L L +
Sbjct: 255 NTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKN 314
Query: 370 HQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISY 429
+ A K+FD M + + Y T + G G ++E L + + D +
Sbjct: 315 GRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVF 374
Query: 430 SCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEA 489
S LI K GK++ A +F + + GL PN VTY +I LC G+++ A F M
Sbjct: 375 SILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMID 434
Query: 490 KGVEPDCVIFNTIMLGFIRNNETSKS 515
+G+ P +++N+++ G N+ ++
Sbjct: 435 EGLSPGNIVYNSLIHGLCTCNKWERA 460
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 182/435 (41%), Gaps = 60/435 (13%)
Query: 61 IFDYMLR--MHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILIN 118
+ D M+R +HP F+IL AK D + +F ++ GL P+ T+ +I
Sbjct: 358 LLDLMVRNGIHPDH---YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIG 414
Query: 119 C-----RIMEAAALFTKLRVFGCEPDVFTYNTLINGLC---------------------- 151
R+ +A F ++ G P YN+LI+GLC
Sbjct: 415 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 474
Query: 152 -------------RTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFVD 198
+ G I + LFE M GV KP+ +TYNT+I+G C G +D
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMV----RIGV--KPNVITYNTLINGYCLAGKMD 528
Query: 199 KAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIV 258
+AM+L M + PN VTY++LI+ + +A LF +M GV P+++T+++I+
Sbjct: 529 EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588
Query: 259 DELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCM 318
L + + A L + + G YN ++ G C + A ++F N C+
Sbjct: 589 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMF----QNLCL 644
Query: 319 HDV----VSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEH 374
D+ ++ +I+ K +EA +L+ G+ P TY + + +E
Sbjct: 645 MDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEE 704
Query: 375 ALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLID 434
+LF M+ N D+ + N + L + G + A I + L+ + S ID
Sbjct: 705 LDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 764
Query: 435 GLCKIGKLETAWELF 449
L GK + +
Sbjct: 765 -LLSGGKYQEYYRFL 778
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 270 bits (690), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 139/389 (35%), Positives = 230/389 (59%), Gaps = 16/389 (4%)
Query: 65 MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYT-----HSILINC 119
M+++ P V+ ++L G N+ D V +L ++ G PD T H + ++
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAV-ALVDQMVEMGYKPDTVTFTTLIHGLFLHN 197
Query: 120 RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 179
+ EA AL ++ GC+PD+ TY ++NGLC+ G T +ALNL +M E
Sbjct: 198 KASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIE------A 251
Query: 180 DTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLF 239
+ V Y+T+ID +CK D A+ LF +M+++ + PNV+TY+SLI C + W++A RL
Sbjct: 252 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLL 311
Query: 240 IKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLT 299
M+++ ++PN+VTFS ++D K GK+ +A +L + MI+ + PN F Y++L++GFC+
Sbjct: 312 SDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCML 371
Query: 300 GRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTY 359
R+ AK++ M C+ +VV+Y TLING+CK K V++ + L+R+M +G+ VTY
Sbjct: 372 DRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTY 431
Query: 360 STLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGN 419
+TL G F+ ++A +F +M V + YN +DGLCKNG + +A+ +F +
Sbjct: 432 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 491
Query: 420 SKYELDIISYSCLIDGLCKIGKLETAWEL 448
S E DI +Y+ +I+G+CK GK W++
Sbjct: 492 STMEPDIYTYNIMIEGMCKAGK----WKM 516
Score = 240 bits (613), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 147/472 (31%), Positives = 239/472 (50%), Gaps = 50/472 (10%)
Query: 45 SGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNST 104
+G DI L ++A+ +F M + P P + F+ L +AK +D V+S +++
Sbjct: 52 TGLSDIEL---DDAIGLFGVMAQSRPFPSIIE-FSKLLSAIAKMNKFDLVISFGEKMEIL 107
Query: 105 GLFPDLYTHSILINC----------------------------------------RIMEA 124
G+ +LYT++ILINC RI +A
Sbjct: 108 GISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 167
Query: 125 AALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTY 184
AL ++ G +PD T+ TLI+GL A+ L + M C+PD VTY
Sbjct: 168 VALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRG------CQPDLVTY 221
Query: 185 NTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMD 244
+++G+CK G D A+ L +M+ I NVV Y+++I ++A LF +M +
Sbjct: 222 GAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 281
Query: 245 QGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNH 304
+GV PNV+T+S ++ LC G+ +ASRLL MI+ ++PN ++ L+D F G++
Sbjct: 282 KGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVK 341
Query: 305 AKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFL 364
A++L+ M ++ +Y++LING+C + EA + M+ K P VVTY+TL
Sbjct: 342 AEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLIN 401
Query: 365 GLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYEL 424
G + +V+ ++LF EM + +T Y T I G + A +F + +
Sbjct: 402 GFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP 461
Query: 425 DIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQ 476
+I++Y+ L+DGLCK GKL A +F+ L R + P++ TYNIMI G+C G+
Sbjct: 462 NILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 201/374 (53%), Gaps = 6/374 (1%)
Query: 138 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFV 197
P + ++ L++ + + + ++ E+M G+ + TYN +I+ C+ +
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKME----ILGI--SHNLYTYNILINCFCRCSRL 129
Query: 198 DKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVI 257
A+ L +M P++VT NSL++ F H + ++A L +M++ G P+ VTF+ +
Sbjct: 130 SLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTL 189
Query: 258 VDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGC 317
+ L + K EA L+D M+Q G P+ Y +++G C G + A L ME+
Sbjct: 190 IHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKI 249
Query: 318 MHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALK 377
+VV Y+T+I+ CK ++ ++ALNL+ +M KG+RP V+TYS+L L + A +
Sbjct: 250 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASR 309
Query: 378 LFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLC 437
L +M + + ++ ID K G +++A +L+ + + +I +YS LI+G C
Sbjct: 310 LLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFC 369
Query: 438 KIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCV 497
+ +L A ++ + + R LPNVVTYN +I+G C ++DK +LF +M +G+ + V
Sbjct: 370 MLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTV 429
Query: 498 IFNTIMLGFIRNNE 511
+ T++ GF + +
Sbjct: 430 TYTTLIHGFFQARD 443
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 34/202 (16%)
Query: 73 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINC-----RIMEAAAL 127
P + +F+ L K L++ + + P+++T+S LIN R+ EA +
Sbjct: 321 PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQM 380
Query: 128 FTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMAN----GN---------GEF- 173
+ C P+V TYNTLING C+ + LF EM+ GN G F
Sbjct: 381 LELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQ 440
Query: 174 ---------------GVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVT 218
V P+ +TYN ++DG+CK G + KAM +F ++ + P++ T
Sbjct: 441 ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYT 500
Query: 219 YNSLIHCFSHADDWNEAKRLFI 240
YN +I A W F+
Sbjct: 501 YNIMIEGMCKAGKWKMGGIYFV 522
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 264 bits (675), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 153/462 (33%), Positives = 244/462 (52%), Gaps = 13/462 (2%)
Query: 50 INLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPD 109
I+L EA+ F M R P S N L AK D V FK + G P
Sbjct: 203 IDLGMLEEAIQCFSKMKRFRVFPK-TRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPT 261
Query: 110 LYTHSILINCRIME-----AAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFE 164
++T++I+I+C E A LF +++ G PD TYN++I+G + G + FE
Sbjct: 262 VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFE 321
Query: 165 EMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIH 224
EM + + C+PD +TYN +I+ CK G + +E + +MK + PNVV+Y++L+
Sbjct: 322 EMKD------MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVD 375
Query: 225 CFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHP 284
F +A + ++ M G+ PN T++ ++D CK G + +A RL + M+Q+GV
Sbjct: 376 AFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEW 435
Query: 285 NTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLY 344
N Y L+DG C R+ A+ELF M++ G + ++ SY LI+G+ K KN++ AL L
Sbjct: 436 NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELL 495
Query: 345 RKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKN 404
++ +GI+P ++ Y T GL + ++E A + +EM+ + A++ IY T +D K+
Sbjct: 496 NELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKS 555
Query: 405 GFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSR-VGLLPNVVT 463
G E L L + E+ ++++ LIDGLCK + A + F +S GL N
Sbjct: 556 GNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAI 615
Query: 464 YNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLG 505
+ MI GLC D Q++ A LF M KG+ PD + ++M G
Sbjct: 616 FTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG 657
Score = 210 bits (535), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 193/354 (54%), Gaps = 6/354 (1%)
Query: 176 VCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEA 235
VC P ++ + + G +++A++ F +MK + P + N L+H F+ ++
Sbjct: 187 VCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDV 246
Query: 236 KRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDG 295
KR F M+ G P V T+++++D +CK G +E A L + M G+ P+T YN+++DG
Sbjct: 247 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 306
Query: 296 FCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPT 355
F GR++ F M+ C DV++Y LIN +CK + L YR+M G++P
Sbjct: 307 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 366
Query: 356 VVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFC 415
VV+YSTL + ++ A+K + +M+ + + Y Y + ID CK G + +A L
Sbjct: 367 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 426
Query: 416 AIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDG 475
+ E ++++Y+ LIDGLC +++ A ELF + G++PN+ +YN +IHG
Sbjct: 427 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 486
Query: 476 QMDKAHDLFLDMEAKGVEPDCVIFNTIMLGF--IRNNETSKSSRGKLMSQMSSC 527
MD+A +L +++ +G++PD +++ T + G + E +K +M++M C
Sbjct: 487 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKV----VMNEMKEC 536
Score = 192 bits (489), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 134/468 (28%), Positives = 213/468 (45%), Gaps = 82/468 (17%)
Query: 71 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINC-----RIMEAA 125
+ P V ++NI+ C+ K + LF+ + GL PD T++ +I+ R+ +
Sbjct: 258 ARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTV 317
Query: 126 ALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYN 185
F +++ CEPDV TYN LIN C+ G + L + EM GNG KP+ V+Y+
Sbjct: 318 CFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREM-KGNG-----LKPNVVSYS 371
Query: 186 TIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQ 245
T++D CKEG + +A++ ++ M+ + PN TY SLI + ++A RL +M+
Sbjct: 372 TLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQV 431
Query: 246 GVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGF--------- 296
GV NVVT++ ++D LC +M+EA L M GV PN YN L+ GF
Sbjct: 432 GVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRA 491
Query: 297 --------------------------CLTGRVNHAKELFVSMESNGCMHDVVSYTTLING 330
C ++ AK + M+ G + + YTTL++
Sbjct: 492 LELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDA 551
Query: 331 YCKTKNVEEALNLYRKMLPKGIRPTVVTY------------------------------- 359
Y K+ N E L+L +M I TVVT+
Sbjct: 552 YFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQA 611
Query: 360 -----STLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELF 414
+ + GL + +QVE A LF++M + D Y + +DG K G VLEAL L
Sbjct: 612 NAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALR 671
Query: 415 CAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVV 462
+ +LD+++Y+ L+ GL +L+ A + + G+ P+ V
Sbjct: 672 DKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEV 719
Score = 135 bits (340), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 171/382 (44%), Gaps = 47/382 (12%)
Query: 73 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILI--NCRI---MEAAAL 127
P V S++ L K + + + GL P+ YT++ LI NC+I +A L
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 128 FTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTI 187
++ G E +V TY LI+GLC A LF +M GV+ P+ +YN +
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA----GVI--PNLASYNAL 478
Query: 188 IDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGV 247
I G K +D+A+EL ++K I P+++ Y + I + AK + +M + G+
Sbjct: 479 IHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI 538
Query: 248 HPN-----------------------------------VVTFSVIVDELCKNGKMEEASR 272
N VVTF V++D LCKN + +A
Sbjct: 539 KANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVD 598
Query: 273 LLDLMIQ-IGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGY 331
+ + G+ N ++ ++DG C +V A LF M G + D +YT+L++G
Sbjct: 599 YFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGN 658
Query: 332 CKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADT 391
K NV EAL L KM G++ ++ Y++L GL +Q++ A +EM + D
Sbjct: 659 FKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDE 718
Query: 392 YIYNTFIDGLCKNGFVLEALEL 413
+ + + + G + EA+EL
Sbjct: 719 VLCISVLKKHYELGCIDEAVEL 740
Score = 116 bits (290), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 158/323 (48%), Gaps = 13/323 (4%)
Query: 75 VSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINCRIM-----EAAALFT 129
V ++ L L + LF ++++ G+ P+L +++ LI+ + A L
Sbjct: 437 VVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLN 496
Query: 130 KLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIID 189
+L+ G +PD+ Y T I GLC A + EM E G+ K +++ Y T++D
Sbjct: 497 ELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMK----ECGI--KANSLIYTTLMD 550
Query: 190 GVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMM-DQGVH 248
K G + + L +MK+ +I VVT+ LI ++A F ++ D G+
Sbjct: 551 AYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQ 610
Query: 249 PNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKEL 308
N F+ ++D LCK+ ++E A+ L + M+Q G+ P+ Y +LMDG G V A L
Sbjct: 611 ANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALAL 670
Query: 309 FVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFE 368
M G D+++YT+L+ G +++A + +M+ +GI P V ++ +E
Sbjct: 671 RDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYE 730
Query: 369 VHQVEHALKLFDE-MQHNDVAAD 390
+ ++ A++L M+H + +D
Sbjct: 731 LGCIDEAVELQSYLMKHQLLTSD 753
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 262 bits (670), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 142/448 (31%), Positives = 244/448 (54%), Gaps = 10/448 (2%)
Query: 73 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINCRIME-----AAAL 127
P VS+FN+L L + + + + + S GL PD T + ++ I E A +
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 128 FTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTI 187
++ FGC + N +++G C+ G ALN +EM+N +G F PD T+NT+
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF-----PDQYTFNTL 301
Query: 188 IDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGV 247
++G+CK G V A+E+ M E +P+V TYNS+I + EA + +M+ +
Sbjct: 302 VNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDC 361
Query: 248 HPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKE 307
PN VT++ ++ LCK ++EEA+ L ++ G+ P+ +N+L+ G CLT A E
Sbjct: 362 SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAME 421
Query: 308 LFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLF 367
LF M S GC D +Y LI+ C ++EALN+ ++M G +V+TY+TL G
Sbjct: 422 LFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFC 481
Query: 368 EVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDII 427
+ ++ A ++FDEM+ + V+ ++ YNT IDGLCK+ V +A +L + + D
Sbjct: 482 KANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKY 541
Query: 428 SYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDM 487
+Y+ L+ C+ G ++ A ++ Q+++ G P++VTY +I GLC G+++ A L +
Sbjct: 542 TYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI 601
Query: 488 EAKGVEPDCVIFNTIMLGFIRNNETSKS 515
+ KG+ +N ++ G R +T+++
Sbjct: 602 QMKGINLTPHAYNPVIQGLFRKRKTTEA 629
Score = 240 bits (613), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 167/545 (30%), Positives = 271/545 (49%), Gaps = 46/545 (8%)
Query: 2 PTSSISENEPSDP---TTTAKLKESLRLTVKDGASIEKFLKERSKSSGQGDINLITPNEA 58
P+S+IS P +T KL +SLR D A++ F K + +P A
Sbjct: 32 PSSTISFASPHSAALSSTDVKLLDSLRSQPDDSAALRLFNLASKKPN-------FSPEPA 84
Query: 59 LCIFDYMLRMHPSPP------------------PVSSFNILFGCLAKNKHYDTVLSLFK- 99
L + +LR+ S S+F IL A+ + D +LS+
Sbjct: 85 L-YEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDW 143
Query: 100 RLNSTGLFPDLYTHSILINC-------RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCR 152
++ GL PD + ++ ++N +++E + K+ V+G +PDV T+N LI LCR
Sbjct: 144 MIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEIS--HAKMSVWGIKPDVSTFNVLIKALCR 201
Query: 153 TGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENI 212
A+ + E+M + +G+V PD T+ T++ G +EG +D A+ + QM +
Sbjct: 202 AHQLRPAILMLEDMPS----YGLV--PDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGC 255
Query: 213 NPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQ-GVHPNVVTFSVIVDELCKNGKMEEAS 271
+ + V+ N ++H F +A +M +Q G P+ TF+ +V+ LCK G ++ A
Sbjct: 256 SWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAI 315
Query: 272 RLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGY 331
++D+M+Q G P+ + YN+++ G C G V A E+ M + C + V+Y TLI+
Sbjct: 316 EIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTL 375
Query: 332 CKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADT 391
CK VEEA L R + KGI P V T+++L GL A++LF+EM+ D
Sbjct: 376 CKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDE 435
Query: 392 YIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQS 451
+ YN ID LC G + EAL + + S +I+Y+ LIDG CK K A E+F
Sbjct: 436 FTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDE 495
Query: 452 LSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNE 511
+ G+ N VTYN +I GLC +++ A L M +G +PD +N+++ F R +
Sbjct: 496 MEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGD 555
Query: 512 TSKSS 516
K++
Sbjct: 556 IKKAA 560
Score = 229 bits (585), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 142/468 (30%), Positives = 230/468 (49%), Gaps = 12/468 (2%)
Query: 56 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSI 115
+E L + D+M+ P +N + L V +++ G+ PD+ T ++
Sbjct: 135 DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNV 194
Query: 116 LIN--CR---IMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 170
LI CR + A + + +G PD T+ T++ G G AL + E+M
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMV--- 251
Query: 171 GEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDEN-INPNVVTYNSLIHCFSHA 229
EFG C V+ N I+ G CKEG V+ A+ +M +++ P+ T+N+L++ A
Sbjct: 252 -EFG--CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKA 308
Query: 230 DDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVY 289
A + M+ +G P+V T++ ++ LCK G+++EA +LD MI PNT Y
Sbjct: 309 GHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTY 368
Query: 290 NTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLP 349
NTL+ C +V A EL + S G + DV ++ +LI G C T+N A+ L+ +M
Sbjct: 369 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRS 428
Query: 350 KGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLE 409
KG P TY+ L L +++ AL + +M+ + A YNT IDG CK E
Sbjct: 429 KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTRE 488
Query: 410 ALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIH 469
A E+F + + ++Y+ LIDGLCK ++E A +L + G P+ TYN ++
Sbjct: 489 AEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLT 548
Query: 470 GLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKSSR 517
C G + KA D+ M + G EPD V + T++ G + +S+
Sbjct: 549 HFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASK 596
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 192/385 (49%), Gaps = 16/385 (4%)
Query: 138 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFV 197
P+ Y ++ L R+G + E+M + E G T T+ +I+ +
Sbjct: 81 PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMG------TSTFLILIESYAQFELQ 134
Query: 198 DKAMELFLQMKDE-NINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSV 256
D+ + + M DE + P+ YN +++ + + KM G+ P+V TF+V
Sbjct: 135 DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNV 194
Query: 257 IVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNG 316
++ LC+ ++ A +L+ M G+ P+ + T+M G+ G ++ A + M G
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254
Query: 317 CMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPK-GIRPTVVTYSTLFLGLFEVHQVEHA 375
C VS +++G+CK VE+ALN ++M + G P T++TL GL + V+HA
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314
Query: 376 LKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDG 435
+++ D M D Y YN+ I GLCK G V EA+E+ + + ++Y+ LI
Sbjct: 315 IEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIST 374
Query: 436 LCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPD 495
LCK ++E A EL + L+ G+LP+V T+N +I GLC A +LF +M +KG EPD
Sbjct: 375 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD 434
Query: 496 CVIFNTIMLGFIRNNETSKSSRGKL 520
+N ++ S S+GKL
Sbjct: 435 EFTYNMLI--------DSLCSKGKL 451
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 84/200 (42%), Gaps = 47/200 (23%)
Query: 56 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSI 115
EA IFD M +H ++N L L K++ + L ++ G PD YT++
Sbjct: 487 REAEEIFDEM-EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNS 545
Query: 116 LIN--CR---IMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGH--------------- 155
L+ CR I +AA + + GCEPD+ TY TLI+GLC+ G
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKG 605
Query: 156 --------------------TIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEG 195
T A+NLF EM N PD V+Y + G+C G
Sbjct: 606 INLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNE-----APPDAVSYRIVFRGLCNGG 660
Query: 196 F-VDKAMELFLQMKDENINP 214
+ +A++ +++ ++ P
Sbjct: 661 GPIREAVDFLVELLEKGFVP 680
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 252 bits (643), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 158/477 (33%), Positives = 246/477 (51%), Gaps = 31/477 (6%)
Query: 61 IFDYMLRMHPSPPPVSSFNILFG--CLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILIN 118
+F ML SP V ++NIL C A N D L+LF ++ + G P++ T++ LI+
Sbjct: 192 VFKEMLESQVSPN-VFTYNILIRGFCFAGN--IDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 119 --CRIMEAAALFTKLRVF---GCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF 173
C++ + F LR G EP++ +YN +INGLCR G + EM N G
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM-NRRG-- 305
Query: 174 GVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWN 233
D VTYNT+I G CKEG +A+ + +M + P+V+TY SLIH A + N
Sbjct: 306 ---YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMN 362
Query: 234 EAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLM 293
A +M +G+ PN T++ +VD + G M EA R+L M G P+ YN L+
Sbjct: 363 RAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI 422
Query: 294 DGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIR 353
+G C+TG++ A + M+ G DVVSY+T+++G+C++ +V+EAL + R+M+ KGI+
Sbjct: 423 NGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 482
Query: 354 PTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALEL 413
P +TYS+L G E + + A L++EM + D + Y I+ C G + +AL+L
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542
Query: 414 FCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIH---- 469
+ D+++YS LI+GL K + A L L +P+ VTY+ +I
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602
Query: 470 -----------GLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKS 515
G C G M +A +F M K +PD +N ++ G R + K+
Sbjct: 603 IEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKA 659
Score = 228 bits (582), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 140/469 (29%), Positives = 228/469 (48%), Gaps = 47/469 (10%)
Query: 76 SSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINCRIME------AAALFT 129
S F+++ ++ D LS+ + G P + +++ +++ I A +F
Sbjct: 135 SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFK 194
Query: 130 KLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIID 189
++ P+VFTYN LI G C G+ VAL LF++M C P+ VTYNT+ID
Sbjct: 195 EMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKG------CLPNVVTYNTLID 248
Query: 190 GVCKEGFVDKAMELFLQMKDENINPNV--------------------------------- 216
G CK +D +L M + + PN+
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 217 --VTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLL 274
VTYN+LI + ++++A + +M+ G+ P+V+T++ ++ +CK G M A L
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Query: 275 DLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKT 334
D M G+ PN Y TL+DGF G +N A + M NG VV+Y LING+C T
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428
Query: 335 KNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIY 394
+E+A+ + M KG+ P VV+YST+ G + V+ AL++ EM + DT Y
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITY 488
Query: 395 NTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSR 454
++ I G C+ EA +L+ + D +Y+ LI+ C G LE A +L +
Sbjct: 489 SSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE 548
Query: 455 VGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIM 503
G+LP+VVTY+++I+GL + +A L L + + P V ++T++
Sbjct: 549 KGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 597
Score = 224 bits (570), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 148/504 (29%), Positives = 245/504 (48%), Gaps = 43/504 (8%)
Query: 58 ALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILI 117
AL +FD M P V ++N L K + D L + + GL P+L +++++I
Sbjct: 224 ALTLFDKM-ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVI 282
Query: 118 NC-----RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE 172
N R+ E + + T++ G D TYNTLI G C+ G+ AL + EM
Sbjct: 283 NGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG-- 340
Query: 173 FGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDW 232
P +TY ++I +CK G +++AME QM+ + PN TY +L+ FS
Sbjct: 341 ----LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396
Query: 233 NEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTL 292
NEA R+ +M D G P+VVT++ +++ C GKME+A +L+ M + G+ P+ Y+T+
Sbjct: 397 NEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTV 456
Query: 293 MDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGI 352
+ GFC + V+ A + M G D ++Y++LI G+C+ + +EA +LY +ML G+
Sbjct: 457 LSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL 516
Query: 353 RPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALE 412
P TY+ L +E AL+L +EM V D Y+ I+GL K EA
Sbjct: 517 PPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKR 576
Query: 413 LFCAIGNSKYELDIISYSCLID---------------GLCKIGKLETAWELFQSLSRVGL 457
L + + ++Y LI+ G C G + A ++F+S+
Sbjct: 577 LLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNH 636
Query: 458 LPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGV----------------EPDCVIFNT 501
P+ YNIMIHG C G + KA+ L+ +M G E N+
Sbjct: 637 KPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNS 696
Query: 502 IMLGFIRNNETSKSSRGKLMSQMS 525
+++ +R+ E S++ + K++ +++
Sbjct: 697 VIVHVLRSCELSEAEQAKVLVEIN 720
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 188/338 (55%), Gaps = 1/338 (0%)
Query: 179 PDTVTYNTIIDGVCKEGF-VDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKR 237
P ++YN ++D + + A +F +M + ++PNV TYN LI F A + + A
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226
Query: 238 LFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFC 297
LF KM +G PNVVT++ ++D CK K+++ +LL M G+ PN YN +++G C
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286
Query: 298 LTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVV 357
GR+ + M G D V+Y TLI GYCK N +AL ++ +ML G+ P+V+
Sbjct: 287 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVI 346
Query: 358 TYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAI 417
TY++L + + + A++ D+M+ + + Y T +DG + G++ EA + +
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406
Query: 418 GNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQM 477
++ + +++Y+ LI+G C GK+E A + + + GL P+VV+Y+ ++ G C +
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDV 466
Query: 478 DKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKS 515
D+A + +M KG++PD + +++++ GF T ++
Sbjct: 467 DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEA 504
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 250 bits (638), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 137/420 (32%), Positives = 221/420 (52%), Gaps = 11/420 (2%)
Query: 73 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINC-----RIMEAAAL 127
P V ++N L K D + R+ S PD T++I+I ++ A +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 128 FTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTI 187
+L C+P V TY LI G AL L +EM + KPD TYNTI
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG------LKPDMFTYNTI 269
Query: 188 IDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGV 247
I G+CKEG VD+A E+ ++ + P+V++YN L+ + W E ++L KM +
Sbjct: 270 IRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329
Query: 248 HPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKE 307
PNVVT+S+++ LC++GK+EEA LL LM + G+ P+ + Y+ L+ FC GR++ A E
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389
Query: 308 LFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLF 367
+M S+GC+ D+V+Y T++ CK ++AL ++ K+ G P +Y+T+F L+
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Query: 368 EVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDII 427
AL + EM N + D YN+ I LC+ G V EA EL + + ++ ++
Sbjct: 450 SSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVV 509
Query: 428 SYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDM 487
+Y+ ++ G CK ++E A + +S+ G PN TY ++I G+ G +A +L D+
Sbjct: 510 TYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Score = 209 bits (531), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 211/427 (49%), Gaps = 12/427 (2%)
Query: 87 KNKHYDTVLSLFKRLNSTGLFPDLYTHSILINC-----RIMEAAALFTKLRVFGCEPDVF 141
++ +Y L L + + G PD+ + LI I +A + L FG +PDVF
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVF 159
Query: 142 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFVDKAM 201
YN LING C+ A + + M + + PDTVTYN +I +C G +D A+
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKD------FSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 202 ELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDEL 261
++ Q+ +N P V+TY LI +EA +L +M+ +G+ P++ T++ I+ +
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 262 CKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDV 321
CK G ++ A ++ + G P+ YN L+ G+ ++L M S C +V
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333
Query: 322 VSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDE 381
V+Y+ LI C+ +EEA+NL + M KG+ P +Y L +++ A++ +
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393
Query: 382 MQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGK 441
M + D YNT + LCKNG +ALE+F +G + SY+ + L G
Sbjct: 394 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 453
Query: 442 LETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNT 501
A + + G+ P+ +TYN MI LC +G +D+A +L +DM + P V +N
Sbjct: 454 KIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNI 513
Query: 502 IMLGFIR 508
++LGF +
Sbjct: 514 VLLGFCK 520
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 195/405 (48%), Gaps = 12/405 (2%)
Query: 56 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSI 115
++A + D M SP V+ +NI+ G L D L + +L S P + T++I
Sbjct: 175 DDATRVLDRMRSKDFSPDTVT-YNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTI 233
Query: 116 LINCRIME-----AAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 170
LI ++E A L ++ G +PD+FTYNT+I G+C+ G A + +
Sbjct: 234 LIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKG 293
Query: 171 GEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHAD 230
C+PD ++YN ++ + +G ++ +L +M E +PNVVTY+ LI
Sbjct: 294 ------CEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDG 347
Query: 231 DWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYN 290
EA L M ++G+ P+ ++ ++ C+ G+++ A L+ MI G P+ YN
Sbjct: 348 KIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYN 407
Query: 291 TLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPK 350
T++ C G+ + A E+F + GC + SY T+ + + + AL++ +M+
Sbjct: 408 TVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSN 467
Query: 351 GIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEA 410
GI P +TY+++ L V+ A +L +M+ + YN + G CK + +A
Sbjct: 468 GIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDA 527
Query: 411 LELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRV 455
+ + ++ + + +Y+ LI+G+ G A EL L R+
Sbjct: 528 INVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRI 572
Score = 159 bits (402), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 170/324 (52%), Gaps = 1/324 (0%)
Query: 192 CKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNV 251
C+ G +++ L M + NP+V+ LI F + +A R+ ++++++ P+V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRV-MEILEKFGQPDV 158
Query: 252 VTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVS 311
++ +++ CK ++++A+R+LD M P+T YN ++ C G+++ A ++
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 312 MESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQ 371
+ S+ C V++YT LI V+EAL L +ML +G++P + TY+T+ G+ +
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 372 VEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSC 431
V+ A ++ ++ D YN + L G E +L + + K + ++++YS
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 432 LIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKG 491
LI LC+ GK+E A L + + GL P+ +Y+ +I C +G++D A + M + G
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 492 VEPDCVIFNTIMLGFIRNNETSKS 515
PD V +NT++ +N + ++
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQA 422
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 123/230 (53%), Gaps = 3/230 (1%)
Query: 297 CLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTV 356
C +G + L +M G DV+ T LI G+ +N+ +A+ + ++L K +P V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158
Query: 357 VTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCA 416
Y+ L G ++++++ A ++ D M+ D + DT YN I LC G + AL++
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 417 IGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQ 476
+ + + +I+Y+ LI+ G ++ A +L + GL P++ TYN +I G+C +G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 477 MDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKSSRGKLMSQMSS 526
+D+A ++ ++E KG EPD + +N ++ + N+ KLM++M S
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALL--NQGKWEEGEKLMTKMFS 326
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 248 bits (632), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/425 (30%), Positives = 227/425 (53%), Gaps = 14/425 (3%)
Query: 73 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINC-----RIMEAAAL 127
P V ++N++ K + LS+ R++ + PD+ T++ ++ ++ +A +
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 128 FTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTI 187
++ C PDV TY LI CR A+ L +EM + C PD VTYN +
Sbjct: 227 LDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRG------CTPDVVTYNVL 280
Query: 188 IDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGV 247
++G+CKEG +D+A++ M PNV+T+N ++ W +A++L M+ +G
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 248 HPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKE 307
P+VVTF+++++ LC+ G + A +L+ M Q G PN+ YN L+ GFC +++ A E
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 308 LFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLF 367
M S GC D+V+Y T++ CK VE+A+ + ++ KG P ++TY+T+ GL
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLA 460
Query: 368 EVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDII 427
+ + A+KL DEM+ D+ DT Y++ + GL + G V EA++ F + +
Sbjct: 461 KAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAV 520
Query: 428 SYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDM 487
+++ ++ GLCK + + A + + G PN +Y I+I GL +G +A +L ++
Sbjct: 521 TFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Query: 488 EAKGV 492
KG+
Sbjct: 581 CNKGL 585
Score = 246 bits (629), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 131/439 (29%), Positives = 230/439 (52%), Gaps = 11/439 (2%)
Query: 70 PSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILIN--CRIMEAAAL 127
P P ++ F L K + +L + L +G PD+ T++++I+ C+ E
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEI---LEGSGAVPDVITYNVMISGYCKAGEINNA 191
Query: 128 FTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTI 187
+ L PDV TYNT++ LC +G A+ + + M + C PD +TY +
Sbjct: 192 LSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD------CYPDVITYTIL 245
Query: 188 IDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGV 247
I+ C++ V AM+L +M+D P+VVTYN L++ +EA + M G
Sbjct: 246 IEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGC 305
Query: 248 HPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKE 307
PNV+T ++I+ +C G+ +A +LL M++ G P+ +N L++ C G + A +
Sbjct: 306 QPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAID 365
Query: 308 LFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLF 367
+ M +GC + +SY L++G+CK K ++ A+ +M+ +G P +VTY+T+ L
Sbjct: 366 ILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALC 425
Query: 368 EVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDII 427
+ +VE A+++ +++ + YNT IDGL K G +A++L + + D I
Sbjct: 426 KDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTI 485
Query: 428 SYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDM 487
+YS L+ GL + GK++ A + F R+G+ PN VT+N ++ GLC Q D+A D + M
Sbjct: 486 TYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFM 545
Query: 488 EAKGVEPDCVIFNTIMLGF 506
+G +P+ + ++ G
Sbjct: 546 INRGCKPNETSYTILIEGL 564
Score = 241 bits (616), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 133/416 (31%), Positives = 222/416 (53%), Gaps = 14/416 (3%)
Query: 105 GLFPDLYTHSILIN--CRI---MEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVA 159
G PD+ + LI CR+ +AA + L G PDV TYN +I+G C+ G A
Sbjct: 132 GNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNA 191
Query: 160 LNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTY 219
L++ + M+ PD VTYNTI+ +C G + +AME+ +M + P+V+TY
Sbjct: 192 LSVLDRMS---------VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITY 242
Query: 220 NSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQ 279
LI A +L +M D+G P+VVT++V+V+ +CK G+++EA + L+ M
Sbjct: 243 TILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS 302
Query: 280 IGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEE 339
G PN +N ++ C TGR A++L M G VV++ LIN C+ +
Sbjct: 303 SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGR 362
Query: 340 ALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFID 399
A+++ KM G +P ++Y+ L G + +++ A++ + M D YNT +
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 400 GLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLP 459
LCK+G V +A+E+ + + +I+Y+ +IDGL K GK A +L + L P
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482
Query: 460 NVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKS 515
+ +TY+ ++ GL +G++D+A F + E G+ P+ V FN+IMLG ++ +T ++
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRA 538
Score = 206 bits (525), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 203/408 (49%), Gaps = 15/408 (3%)
Query: 56 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSI 115
N AL + D RM SP V ++N + L + + + R+ +PD+ T++I
Sbjct: 189 NNALSVLD---RMSVSPD-VVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTI 244
Query: 116 LIN--CR---IMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 170
LI CR + A L ++R GC PDV TYN L+NG+C+ G A+ +M +
Sbjct: 245 LIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG 304
Query: 171 GEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHAD 230
C+P+ +T+N I+ +C G A +L M + +P+VVT+N LI+
Sbjct: 305 ------CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKG 358
Query: 231 DWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYN 290
A + KM G PN ++++ ++ CK KM+ A L+ M+ G +P+ YN
Sbjct: 359 LLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYN 418
Query: 291 TLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPK 350
T++ C G+V A E+ + S GC +++Y T+I+G K +A+ L +M K
Sbjct: 419 TMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK 478
Query: 351 GIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEA 410
++P +TYS+L GL +V+ A+K F E + + + +N+ + GLCK+ A
Sbjct: 479 DLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRA 538
Query: 411 LELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLL 458
++ + N + + SY+ LI+GL G + A EL L GL+
Sbjct: 539 IDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 185/363 (50%), Gaps = 8/363 (2%)
Query: 167 ANGNGEFGVVCKP---DTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLI 223
+NGNG + V + V N + + + G +++ + M P+++ +LI
Sbjct: 85 SNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLI 144
Query: 224 HCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVH 283
F +A ++ + G P+V+T++V++ CK G++ A +LD M V
Sbjct: 145 RGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVS 201
Query: 284 PNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNL 343
P+ YNT++ C +G++ A E+ M C DV++YT LI C+ V A+ L
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKL 261
Query: 344 YRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCK 403
+M +G P VVTY+ L G+ + +++ A+K ++M + + +N + +C
Sbjct: 262 LDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321
Query: 404 NGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVT 463
G ++A +L + + +++++ LI+ LC+ G L A ++ + + + G PN ++
Sbjct: 322 TGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS 381
Query: 464 YNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKSSRGKLMSQ 523
YN ++HG C + +MD+A + M ++G PD V +NT++ ++ + + ++++Q
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAV--EILNQ 439
Query: 524 MSS 526
+SS
Sbjct: 440 LSS 442
>sp|Q9SZ20|PP339_ARATH Pentatricopeptide repeat-containing protein At4g26800
OS=Arabidopsis thaliana GN=At4g26800 PE=2 SV=2
Length = 514
Score = 247 bits (631), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 149/439 (33%), Positives = 243/439 (55%), Gaps = 15/439 (3%)
Query: 53 ITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL-NSTGL--FPD 109
I ++A +F M +P P V FN + +AK + YD V++L+KR+ N+ G+ PD
Sbjct: 64 IKFDDAFHLFVLMAYSYPLPSIVE-FNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPD 122
Query: 110 LYTHSILINC-----RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFE 164
LYT +IL+NC + A + K+ G EPD+ T ++L+NG C + A+ +
Sbjct: 123 LYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAG 182
Query: 165 EMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIH 224
+M + G+ K D V +ID +CK V A+E+ +MKD I+PNVVTY+SLI
Sbjct: 183 QME----KMGI--KRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLIT 236
Query: 225 CFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHP 284
+ +A+R +M + ++PNV+TFS ++D K GK+ + + +MIQ+ + P
Sbjct: 237 GLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDP 296
Query: 285 NTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLY 344
N F Y++L+ G C+ RV+ A ++ M S GC +VV+Y+TL NG+ K+ V++ + L
Sbjct: 297 NVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLL 356
Query: 345 RKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKN 404
M +G+ V+ +TL G F+ +++ AL +F M N + + YN + GL N
Sbjct: 357 DDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFAN 416
Query: 405 GFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTY 464
G V +AL F + ++ +LDII+Y+ +I G+CK ++ A++LF L + P+ Y
Sbjct: 417 GEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAY 476
Query: 465 NIMIHGLCNDGQMDKAHDL 483
IMI L G +A L
Sbjct: 477 TIMIAELNRAGMRTEADAL 495
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 169/340 (49%), Gaps = 3/340 (0%)
Query: 179 PDTVTYNTIIDGVCKEGFVDKAMELFLQMKDEN---INPNVVTYNSLIHCFSHADDWNEA 235
P V +N ++ + K D + L+ ++++ I+P++ T N L++CF + A
Sbjct: 83 PSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSA 142
Query: 236 KRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDG 295
KMM G+ P++VT S +V+ C + +++A + M ++G+ + V L+D
Sbjct: 143 LSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDT 202
Query: 296 FCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPT 355
C V A E+ M+ G +VV+Y++LI G CK+ + +A +M K I P
Sbjct: 203 LCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPN 262
Query: 356 VVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFC 415
V+T+S L + ++ ++ M + + + Y++ I GLC + V EA+++
Sbjct: 263 VITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLD 322
Query: 416 AIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDG 475
+ + ++++YS L +G K +++ +L + + G+ N V+ N +I G G
Sbjct: 323 LMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAG 382
Query: 476 QMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKS 515
++D A +F M + G+ P+ +N ++ G N E K+
Sbjct: 383 KIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKA 422
Score = 119 bits (298), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 149/330 (45%), Gaps = 38/330 (11%)
Query: 217 VTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTF---------------------- 254
+ Y ++ H +++A LF+ M P++V F
Sbjct: 51 IDYREVLRSGLHNIKFDDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDVVINLWKR 110
Query: 255 ----------------SVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCL 298
+++V+ C+ + A L M+++G+ P+ ++L++GFCL
Sbjct: 111 IENAEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCL 170
Query: 299 TGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVT 358
+ + A + ME G DVV T LI+ CK + V AL + ++M +GI P VVT
Sbjct: 171 SNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVT 230
Query: 359 YSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIG 418
YS+L GL + ++ A + EM + + ++ ID K G + + ++ +
Sbjct: 231 YSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMI 290
Query: 419 NSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMD 478
+ ++ +YS LI GLC +++ A ++ + G PNVVTY+ + +G ++D
Sbjct: 291 QMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVD 350
Query: 479 KAHDLFLDMEAKGVEPDCVIFNTIMLGFIR 508
L DM +GV + V NT++ G+ +
Sbjct: 351 DGIKLLDDMPQRGVAANTVSCNTLIKGYFQ 380
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 115/272 (42%), Gaps = 51/272 (18%)
Query: 338 EEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHND---VAADTYIY 394
++A +L+ M P++V ++ + + ++ + + L+ +++ + ++ D Y
Sbjct: 67 DDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTC 126
Query: 395 NTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLC----------KIGKLET 444
N ++ C+ AL + E DI++ S L++G C G++E
Sbjct: 127 NILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEK 186
Query: 445 -------------------------AWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDK 479
A E+ + + G+ PNVVTY+ +I GLC G++
Sbjct: 187 MGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLAD 246
Query: 480 AHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSK-SSRGKLMSQMSS----------CW 528
A +M++K + P+ + F+ ++ + + + SK S K+M QMS +
Sbjct: 247 AERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIY 306
Query: 529 SMCFQPKT--LICSISIMLQKDMSPGDTMFST 558
+C + I + +M+ K +P +ST
Sbjct: 307 GLCMHNRVDEAIKMLDLMISKGCTPNVVTYST 338
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 244 bits (624), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 149/441 (33%), Positives = 228/441 (51%), Gaps = 16/441 (3%)
Query: 69 HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHS--ILINC---RIME 123
H P + L L+K + L L + + G PD T + IL C RI E
Sbjct: 246 HGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINE 305
Query: 124 AAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVT 183
AA + ++ + G PD TY L+NGLC+ G A +LF + KP+ V
Sbjct: 306 AAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----------KPEIVI 355
Query: 184 YNTIIDGVCKEGFVDKAMELFLQM-KDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKM 242
+NT+I G G +D A + M I P+V TYNSLI+ + A + M
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415
Query: 243 MDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRV 302
++G PNV +++++VD CK GK++EA +L+ M G+ PNT +N L+ FC R+
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475
Query: 303 NHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTL 362
A E+F M GC DV ++ +LI+G C+ ++ AL L R M+ +G+ VTY+TL
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535
Query: 363 FLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKY 422
+++ A KL +EM D YN+ I GLC+ G V +A LF + +
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595
Query: 423 ELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHD 482
IS + LI+GLC+ G +E A E + + G P++VT+N +I+GLC G+++
Sbjct: 596 APSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLT 655
Query: 483 LFLDMEAKGVEPDCVIFNTIM 503
+F ++A+G+ PD V FNT+M
Sbjct: 656 MFRKLQAEGIPPDTVTFNTLM 676
Score = 241 bits (615), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 142/443 (32%), Positives = 237/443 (53%), Gaps = 16/443 (3%)
Query: 72 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINC-----RIMEAAA 126
PP + +F ++ D+ LSL + + G P+ + LI+ R+ EA
Sbjct: 214 PPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQ 273
Query: 127 LFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNT 186
L ++ + GC PD T+N +I GLC+ +N +M N G PD +TY
Sbjct: 274 LLEEMFLMGCVPDAETFNDVILGLCKFDR----INEAAKMVNRMLIRGFA--PDDITYGY 327
Query: 187 IIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQ- 245
+++G+CK G VD A +LF ++ P +V +N+LIH F ++AK + M+
Sbjct: 328 LMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 383
Query: 246 GVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHA 305
G+ P+V T++ ++ K G + A +L M G PN + Y L+DGFC G+++ A
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 443
Query: 306 KELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLG 365
+ M ++G + V + LI+ +CK + EA+ ++R+M KG +P V T+++L G
Sbjct: 444 YNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 503
Query: 366 LFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELD 425
L EV +++HAL L +M V A+T YNT I+ + G + EA +L + LD
Sbjct: 504 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLD 563
Query: 426 IISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFL 485
I+Y+ LI GLC+ G+++ A LF+ + R G P+ ++ NI+I+GLC G +++A +
Sbjct: 564 EITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQK 623
Query: 486 DMEAKGVEPDCVIFNTIMLGFIR 508
+M +G PD V FN+++ G R
Sbjct: 624 EMVLRGSTPDIVTFNSLINGLCR 646
Score = 199 bits (505), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 228/457 (49%), Gaps = 25/457 (5%)
Query: 78 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINC-RIMEAAA-------LFT 129
+ +L G L N + T+ L ++ G+ ++ S+ I+ R + A L
Sbjct: 114 YQVLIGKLGANGEFKTIDRLLIQMKDEGI---VFKESLFISIMRDYDKAGFPGQTTRLML 170
Query: 130 KLR-VFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTII 188
++R V+ CEP +YN ++ L VA N+F +M + P T+ ++
Sbjct: 171 EMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRK------IPPTLFTFGVVM 224
Query: 189 DGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVH 248
C +D A+ L M PN V Y +LIH S + NEA +L +M G
Sbjct: 225 KAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCV 284
Query: 249 PNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKEL 308
P+ TF+ ++ LCK ++ EA+++++ M+ G P+ Y LM+G C GRV+ AK+L
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDL 344
Query: 309 FVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPK-GIRPTVVTYSTLFLGLF 367
F + ++V + TLI+G+ +++A + M+ GI P V TY++L G +
Sbjct: 345 FYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYW 400
Query: 368 EVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDII 427
+ V AL++ +M++ + Y Y +DG CK G + EA + + + + +
Sbjct: 401 KEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTV 460
Query: 428 SYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDM 487
++CLI CK ++ A E+F+ + R G P+V T+N +I GLC ++ A L DM
Sbjct: 461 GFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM 520
Query: 488 EAKGVEPDCVIFNTIMLGFIRNNETSKSSRGKLMSQM 524
++GV + V +NT++ F+R E ++ KL+++M
Sbjct: 521 ISEGVVANTVTYNTLINAFLRRGEIKEAR--KLVNEM 555
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 126/426 (29%), Positives = 211/426 (49%), Gaps = 9/426 (2%)
Query: 56 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFP-DLYTHS 114
NEA + + ML +P ++ + L L K D LF R+ + + H
Sbjct: 304 NEAAKMVNRMLIRGFAPDDIT-YGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHG 362
Query: 115 ILINCRIMEAAALFTKLRV-FGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF 173
+ + R+ +A A+ + + +G PDV TYN+LI G + G +AL + +M N
Sbjct: 363 FVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG--- 419
Query: 174 GVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWN 233
CKP+ +Y ++DG CK G +D+A + +M + + PN V +N LI F
Sbjct: 420 ---CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIP 476
Query: 234 EAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLM 293
EA +F +M +G P+V TF+ ++ LC+ +++ A LL MI GV NT YNTL+
Sbjct: 477 EAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLI 536
Query: 294 DGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIR 353
+ F G + A++L M G D ++Y +LI G C+ V++A +L+ KML G
Sbjct: 537 NAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHA 596
Query: 354 PTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALEL 413
P+ ++ + L GL VE A++ EM D +N+ I+GLC+ G + + L +
Sbjct: 597 PSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTM 656
Query: 414 FCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCN 473
F + D ++++ L+ LCK G + A L G +PN T++I++ +
Sbjct: 657 FRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIP 716
Query: 474 DGQMDK 479
+D+
Sbjct: 717 QETLDR 722
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 241 bits (615), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 141/480 (29%), Positives = 245/480 (51%), Gaps = 21/480 (4%)
Query: 57 EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSIL 116
+ + +F M+ P V + + L L K +H+ + LF + S G+ PD+Y ++ +
Sbjct: 174 DGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGV 233
Query: 117 IN--CRIME---AAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 171
I C + + A + + GC+ ++ YN LI+GLC+ A+ + +++A
Sbjct: 234 IRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLA---- 289
Query: 172 EFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADD 231
G KPD VTY T++ G+CK + +E+ +M +P+ +SL+
Sbjct: 290 --GKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGK 347
Query: 232 WNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNT 291
EA L +++D GV PN+ ++ ++D LCK K EA L D M +IG+ PN Y+
Sbjct: 348 IEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSI 407
Query: 292 LMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKG 351
L+D FC G+++ A M G V Y +LING+CK ++ A +M+ K
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK 467
Query: 352 IRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEAL 411
+ PTVVTY++L G ++ AL+L+ EM +A Y + T + GL + G + +A+
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527
Query: 412 ELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGL 471
+LF + + + ++Y+ +I+G C+ G + A+E + ++ G++P+ +Y +IHGL
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587
Query: 472 CNDGQMDKAHDLFLDMEAKG-VEPDCVIFNTIMLGFIRNNETSKSSRGKLMSQMSSCWSM 530
C GQ +A +F+D KG E + + + ++ GF R GKL +S C M
Sbjct: 588 CLTGQASEAK-VFVDGLHKGNCELNEICYTGLLHGFCRE--------GKLEEALSVCQEM 638
Score = 228 bits (582), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 151/537 (28%), Positives = 253/537 (47%), Gaps = 79/537 (14%)
Query: 49 DINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFP 108
+I L +E LC LR PS VSS L L K + L+L KR+ G+ P
Sbjct: 314 EIGLEMMDEMLC-----LRFSPSEAAVSS---LVEGLRKRGKIEEALNLVKRVVDFGVSP 365
Query: 109 DLYTHSILINC-----RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLF 163
+L+ ++ LI+ + EA LF ++ G P+ TY+ LI+ CR G AL+
Sbjct: 366 NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFL 425
Query: 164 EEMA---------------NGNGEFGVVC--------------KPDTVTYNTIIDGVCKE 194
EM NG+ +FG + +P VTY +++ G C +
Sbjct: 426 GEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSK 485
Query: 195 GFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTF 254
G ++KA+ L+ +M + I P++ T+ +L+ A +A +LF +M + V PN VT+
Sbjct: 486 GKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTY 545
Query: 255 SVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMES 314
+V+++ C+ G M +A L M + G+ P+T+ Y L+ G CLTG+ + AK +
Sbjct: 546 NVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605
Query: 315 NGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEH 374
C + + YT L++G+C+ +EEAL++ ++M+ +G+ +V Y L G + +
Sbjct: 606 GNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKL 665
Query: 375 ALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLID 434
L EM + D IY + ID K G EA ++ + N + ++Y+ +I+
Sbjct: 666 FFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN 725
Query: 435 GLCKIG------------------------------------KLETAWELFQSLSRVGLL 458
GLCK G ++ A EL ++ + GLL
Sbjct: 726 GLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLL 784
Query: 459 PNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKS 515
N TYN++I G C G++++A +L M GV PDC+ + T++ R N+ K+
Sbjct: 785 ANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKA 841
Score = 196 bits (498), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 152/539 (28%), Positives = 245/539 (45%), Gaps = 102/539 (18%)
Query: 56 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSI 115
+EA +FD M ++ P V+ ++IL + DT LS + TGL +Y ++
Sbjct: 384 HEAELLFDRMGKIGLRPNDVT-YSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNS 442
Query: 116 LINC----------------------------------------RIMEAAALFTKLRVFG 135
LIN +I +A L+ ++ G
Sbjct: 443 LINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG 502
Query: 136 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEG 195
P ++T+ TL++GL R G A+ LF EMA N KP+ VTYN +I+G C+EG
Sbjct: 503 IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN------VKPNRVTYNVMIEGYCEEG 556
Query: 196 FVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQG-VHPNVVTF 254
+ KA E +M ++ I P+ +Y LIH +EAK +F+ + +G N + +
Sbjct: 557 DMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK-VFVDGLHKGNCELNEICY 615
Query: 255 SVIVDELCKNGKMEEASRLLDLMIQIGV-------------------------------- 282
+ ++ C+ GK+EEA + M+Q GV
Sbjct: 616 TGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHD 675
Query: 283 ---HPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEE 339
P+ +Y +++D TG A ++ M + GC+ + V+YT +ING CK V E
Sbjct: 676 RGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNE 735
Query: 340 ALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQV--EHALKLFDEMQHNDVAADTYIYNTF 397
A L KM P P VTY FL + +V + A++L + + + A+T YN
Sbjct: 736 AEVLCSKMQPVSSVPNQVTYGC-FLDILTKGEVDMQKAVELHNAILKG-LLANTATYNML 793
Query: 398 IDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGL 457
I G C+ G + EA EL + D I+Y+ +I+ LC+ ++ A EL+ S++ G+
Sbjct: 794 IRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGI 853
Query: 458 LPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKSS 516
P+ V YN +IHG C G+M KA +L +M +G+ P NN+TS+++
Sbjct: 854 RPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIP--------------NNKTSRTT 898
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 238 bits (607), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 145/474 (30%), Positives = 233/474 (49%), Gaps = 47/474 (9%)
Query: 75 VSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILIN--CR---IMEAAALFT 129
+ +N L LA+ D + ++ + + P++YT++ ++N C+ + EA +
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 130 KLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIID 189
K+ G +PD FTY +LI G C+ A +F EM C+ + V Y +I
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKG------CRRNEVAYTHLIH 296
Query: 190 GVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHP 249
G+C +D+AM+LF++MKD+ P V TY LI ++ +EA L +M + G+ P
Sbjct: 297 GLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKP 356
Query: 250 NVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELF 309
N+ T++V++D LC K E+A LL M++ G+ PN YN L++G+C G + A ++
Sbjct: 357 NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV 416
Query: 310 VSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEV 369
MES + +Y LI GYCK+ NV +A+ + KML + + P VVTY++L G
Sbjct: 417 ELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRS 475
Query: 370 HQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISY 429
+ A +L M + D + Y + ID LCK+ V EA +LF ++ +++ Y
Sbjct: 476 GNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMY 535
Query: 430 SCLIDG-----------------------------------LCKIGKLETAWELFQSLSR 454
+ LIDG LC GKL+ A L + + +
Sbjct: 536 TALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVK 595
Query: 455 VGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIR 508
+GL P V T I+IH L DG D A+ F M + G +PD + T + + R
Sbjct: 596 IGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCR 649
Score = 229 bits (583), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 154/554 (27%), Positives = 263/554 (47%), Gaps = 82/554 (14%)
Query: 73 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILIN-----CRIMEAAAL 127
P V ++ +L L ++ L+L K + TG+ P+++T+++LI+ C+ +A L
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 128 FTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTI 187
++ G P+V TYN LING C+ G A+++ E M + P+T TYN +
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK------LSPNTRTYNEL 434
Query: 188 IDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGV 247
I G CK V KAM + +M + + P+VVTYNSLI + +++ A RL M D+G+
Sbjct: 435 IKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGL 493
Query: 248 HPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKE 307
P+ T++ ++D LCK+ ++EEA L D + Q GV+PN +Y L+DG+C G+V+ A
Sbjct: 494 VPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHL 553
Query: 308 LFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLF 367
+ M S C+ + +++ LI+G C ++EA L KM+ G++PTV T + L L
Sbjct: 554 MLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLL 613
Query: 368 EVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDII 427
+ +HA F +M + D + Y TFI C+ G +L+A ++ + + D+
Sbjct: 614 KDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLF 673
Query: 428 SYSCLIDGLCKIGK---------------------------------------------- 441
+YS LI G +G+
Sbjct: 674 TYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELC 733
Query: 442 -------LETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEA-KGVE 493
+T EL + + + PN +Y +I G+C G + A +F M+ +G+
Sbjct: 734 AMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGIS 793
Query: 494 PDCVIFNTIM---LGFIRNNETSKSSRGKL----MSQMSSCWSMCFQPKTLICSISIMLQ 546
P ++FN ++ ++NE +K + + Q+ SC K LIC + +
Sbjct: 794 PSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESC-------KVLICGLYKKGE 846
Query: 547 KDMSPGDTMFSTAL 560
K+ G ++F L
Sbjct: 847 KER--GTSVFQNLL 858
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/379 (32%), Positives = 199/379 (52%), Gaps = 7/379 (1%)
Query: 138 PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFV 197
P+++TYN ++NG C+ G+ A ++ E G+ PD TY ++I G C+ +
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIV----EAGL--DPDFFTYTSLIMGYCQRKDL 269
Query: 198 DKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVI 257
D A ++F +M + N V Y LIH A +EA LF+KM D P V T++V+
Sbjct: 270 DSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVL 329
Query: 258 VDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGC 317
+ LC + + EA L+ M + G+ PN Y L+D C + A+EL M G
Sbjct: 330 IKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGL 389
Query: 318 MHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALK 377
M +V++Y LINGYCK +E+A+++ M + + P TY+ L G + + V A+
Sbjct: 390 MPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMG 448
Query: 378 LFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLC 437
+ ++M V D YN+ IDG C++G A L + + D +Y+ +ID LC
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 508
Query: 438 KIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCV 497
K ++E A +LF SL + G+ PNVV Y +I G C G++D+AH + M +K P+ +
Sbjct: 509 KSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSL 568
Query: 498 IFNTIMLGFIRNNETSKSS 516
FN ++ G + + +++
Sbjct: 569 TFNALIHGLCADGKLKEAT 587
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 216/457 (47%), Gaps = 30/457 (6%)
Query: 73 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINC-----RIMEAAAL 127
P V ++N L ++ ++D+ L +N GL PD +T++ +I+ R+ EA L
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519
Query: 128 FTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTI 187
F L G P+V Y LI+G C+ G A + E+M + N C P+++T+N +
Sbjct: 520 FDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN------CLPNSLTFNAL 573
Query: 188 IDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGV 247
I G+C +G + +A L +M + P V T LIH D++ A F +M+ G
Sbjct: 574 IHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGT 633
Query: 248 HPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKE 307
P+ T++ + C+ G++ +A ++ M + GV P+ F Y++L+ G+ G+ N A +
Sbjct: 634 KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFD 693
Query: 308 LFVSMESNGCMHDVVSYTTLIN-----GYCKTKNVEEAL-------------NLYRKMLP 349
+ M GC ++ +LI Y K K E L L KM+
Sbjct: 694 VLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVE 753
Query: 350 KGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHND-VAADTYIYNTFIDGLCKNGFVL 408
+ P +Y L LG+ EV + A K+FD MQ N+ ++ ++N + CK
Sbjct: 754 HSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHN 813
Query: 409 EALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMI 468
EA ++ + + + S LI GL K G+ E +FQ+L + G + + + I+I
Sbjct: 814 EAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIII 873
Query: 469 HGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLG 505
G+ G ++ ++LF ME G + ++ ++ G
Sbjct: 874 DGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 188/374 (50%), Gaps = 16/374 (4%)
Query: 152 RTGHTIVALNLFEEMANGNGEFGVVCKP--------DTVTYNTIIDGVCKEGFVDKAMEL 203
R H++ + + NG GVV K D+V + +C++ D+ EL
Sbjct: 118 RYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFEL 177
Query: 204 FLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCK 263
++ + YN+L++ + +E K+++++M++ V PN+ T++ +V+ CK
Sbjct: 178 KYKLI-------IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCK 230
Query: 264 NGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVS 323
G +EEA++ + +++ G+ P+ F Y +L+ G+C ++ A ++F M GC + V+
Sbjct: 231 LGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVA 290
Query: 324 YTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQ 383
YT LI+G C + ++EA++L+ KM PTV TY+ L L + AL L EM+
Sbjct: 291 YTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEME 350
Query: 384 HNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLE 443
+ + + Y ID LC +A EL + ++I+Y+ LI+G CK G +E
Sbjct: 351 ETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIE 410
Query: 444 TAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIM 503
A ++ + + L PN TYN +I G C + KA + M + V PD V +N+++
Sbjct: 411 DAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLI 469
Query: 504 LGFIRNNETSKSSR 517
G R+ + R
Sbjct: 470 DGQCRSGNFDSAYR 483
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 234 bits (597), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 152/517 (29%), Positives = 252/517 (48%), Gaps = 25/517 (4%)
Query: 66 LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINC-----R 120
+R + P V S+N + + K + L L + +G L T ILI+ +
Sbjct: 168 MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGK 227
Query: 121 IMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEE-MANGNGEFGVVCKP 179
+ EA +++ G E D+ Y +LI G C G LF+E + G+ P
Sbjct: 228 MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDS-------P 280
Query: 180 DTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLF 239
+TYNT+I G CK G + +A E+F M + + PNV TY LI EA +L
Sbjct: 281 CAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLL 340
Query: 240 IKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLT 299
M+++ PN VT+++I+++LCK+G + +A +++LM + P+ YN L+ G C
Sbjct: 341 NLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAK 400
Query: 300 GRVNHAKELFVSM--ESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVV 357
G ++ A +L M +S+ DV+SY LI+G CK + +AL++Y ++ K V
Sbjct: 401 GDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRV 460
Query: 358 TYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAI 417
T + L + V A++L+ ++ + + ++ Y IDG CK G + A L C +
Sbjct: 461 TTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKM 520
Query: 418 GNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQM 477
S+ + + Y+CL+ LCK G L+ AW LF+ + R P+VV++NIMI G G +
Sbjct: 521 RVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDI 580
Query: 478 DKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKSSRGKLMSQMSSCWSMCFQPKTL 537
A L + M G+ PD ++ ++ F++ ++ +S F+P
Sbjct: 581 KSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEA-----ISFFDKMVDSGFEPDAH 635
Query: 538 ICSISIMLQKDMSPGDTMFSTAL---LMDPDCSCDLE 571
IC +L+ +S G+T T L L+D D D E
Sbjct: 636 IC--DSVLKYCISQGETDKLTELVKKLVDKDIVLDKE 670
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/439 (27%), Positives = 219/439 (49%), Gaps = 38/439 (8%)
Query: 79 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINCRIMEAAALFTKLRVFGCEP 138
N L L ++++++ S ++++ T F + + S L+ C + ++R G
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLEC--------YVQMRKTG--- 124
Query: 139 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFVD 198
F + L L R A N++ +N ++ G+C+
Sbjct: 125 --FAFGVLALMLKRG----FAFNVY-------------------NHNILLKGLCRNLECG 159
Query: 199 KAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIV 258
KA+ L +M+ ++ P+V +YN++I F + +A L +M G ++VT+ +++
Sbjct: 160 KAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILI 219
Query: 259 DELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCM 318
D CK GKM+EA L M +G+ + VY +L+ GFC G ++ K LF + G
Sbjct: 220 DAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDS 279
Query: 319 HDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKL 378
++Y TLI G+CK ++EA ++ M+ +G+RP V TY+ L GL V + + AL+L
Sbjct: 280 PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQL 339
Query: 379 FDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCK 438
+ M D + YN I+ LCK+G V +A+E+ + + D I+Y+ L+ GLC
Sbjct: 340 LNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCA 399
Query: 439 IGKLETAWELFQSLSRVGLL--PNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDC 496
G L+ A +L + + P+V++YN +IHGLC + ++ +A D++ + K D
Sbjct: 400 KGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDR 459
Query: 497 VIFNTIMLGFIRNNETSKS 515
V N ++ ++ + +K+
Sbjct: 460 VTTNILLNSTLKAGDVNKA 478
Score = 178 bits (452), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 205/415 (49%), Gaps = 13/415 (3%)
Query: 96 SLFKRLNSTGLFPDLYTHSILIN--CRI---MEAAALFTKLRVFGCEPDVFTYNTLINGL 150
+LF + G P T++ LI C++ EA+ +F + G P+V+TY LI+GL
Sbjct: 268 ALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGL 327
Query: 151 CRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDE 210
C G T AL L M + E P+ VTYN II+ +CK+G V A+E+ MK
Sbjct: 328 CGVGKTKEALQLLNLMIEKDEE------PNAVTYNIIINKLCKDGLVADAVEIVELMKKR 381
Query: 211 NINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVH--PNVVTFSVIVDELCKNGKME 268
P+ +TYN L+ D +EA +L M+ + P+V++++ ++ LCK ++
Sbjct: 382 RTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLH 441
Query: 269 EASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLI 328
+A + DL+++ + N L++ G VN A EL+ + + + + +YT +I
Sbjct: 442 QALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMI 501
Query: 329 NGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVA 388
+G+CKT + A L KM ++P+V Y+ L L + ++ A +LF+EMQ ++
Sbjct: 502 DGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNF 561
Query: 389 ADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWEL 448
D +N IDG K G + A L + + D+ +YS LI+ K+G L+ A
Sbjct: 562 PDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISF 621
Query: 449 FQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIM 503
F + G P+ + ++ + G+ DK +L + K + D + T+M
Sbjct: 622 FDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVM 676
Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 176/380 (46%), Gaps = 49/380 (12%)
Query: 61 IFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINC- 119
+FD +L SP ++ +N L K +F+ + G+ P++YT++ LI+
Sbjct: 269 LFDEVLERGDSPCAIT-YNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGL 327
Query: 120 ----RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV 175
+ EA L + EP+ TYN +IN LC+ G A+ + E M
Sbjct: 328 CGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRR----- 382
Query: 176 VCKPDTVTYNTIIDGVCKEGFVDKAMEL-FLQMKDEN-INPNVVTYNSLIHCFSH----- 228
+PD +TYN ++ G+C +G +D+A +L +L +KD + +P+V++YN+LIH
Sbjct: 383 -TRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLH 441
Query: 229 ------------------------------ADDWNEAKRLFIKMMDQGVHPNVVTFSVIV 258
A D N+A L+ ++ D + N T++ ++
Sbjct: 442 QALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMI 501
Query: 259 DELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCM 318
D CK G + A LL M + P+ F YN L+ C G ++ A LF M+ +
Sbjct: 502 DGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNF 561
Query: 319 HDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKL 378
DVVS+ +I+G K +++ A +L M G+ P + TYS L ++ ++ A+
Sbjct: 562 PDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISF 621
Query: 379 FDEMQHNDVAADTYIYNTFI 398
FD+M + D +I ++ +
Sbjct: 622 FDKMVDSGFEPDAHICDSVL 641
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 177/376 (47%), Gaps = 14/376 (3%)
Query: 57 EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSIL 116
EAL + + M+ P V+ +NI+ L K+ + + + + PD T++IL
Sbjct: 335 EALQLLNLMIEKDEEPNAVT-YNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNIL 393
Query: 117 IN--CR---IMEAAALFTKLRVFGC--EPDVFTYNTLINGLCRTGHTIVALNLFEEMANG 169
+ C + EA+ L + +PDV +YN LI+GLC+ AL++++ +
Sbjct: 394 LGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEK 453
Query: 170 NGEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHA 229
G D VT N +++ K G V+KAMEL+ Q+ D I N TY ++I F
Sbjct: 454 LG------AGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKT 507
Query: 230 DDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVY 289
N AK L KM + P+V ++ ++ LCK G +++A RL + M + P+ +
Sbjct: 508 GMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSF 567
Query: 290 NTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLP 349
N ++DG G + A+ L V M G D+ +Y+ LIN + K ++EA++ + KM+
Sbjct: 568 NIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVD 627
Query: 350 KGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLE 409
G P ++ + + +L ++ D+ D + T +D +C + ++
Sbjct: 628 SGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMD 687
Query: 410 ALELFCAIGNSKYELD 425
+ + + K E D
Sbjct: 688 LAKRLLRVTDDKEERD 703
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 108/231 (46%)
Query: 286 TFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYR 345
F N LM + A + M + VS + L+ Y + + A +
Sbjct: 72 AFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLA 131
Query: 346 KMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNG 405
ML +G V ++ L GL + A+ L EM+ N + D + YNT I G C+
Sbjct: 132 LMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGK 191
Query: 406 FVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYN 465
+ +ALEL + S ++++ LID CK GK++ A + + +GL ++V Y
Sbjct: 192 ELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYT 251
Query: 466 IMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKSS 516
+I G C+ G++D+ LF ++ +G P + +NT++ GF + + ++S
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEAS 302
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 233 bits (594), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 130/388 (33%), Positives = 202/388 (52%), Gaps = 22/388 (5%)
Query: 135 GCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKE 194
G PD TY+ ++N LC +A LFEEM G G+V D TY ++D CK
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRG----GLV--ADVYTYTIMVDSFCKA 531
Query: 195 GFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTF 254
G +++A + F +M++ PNVVTY +LIH + A + A LF M+ +G PN+VT+
Sbjct: 532 GLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTY 591
Query: 255 SVIVDELCKNGKMEEASRLLDLMIQI----------------GVHPNTFVYNTLMDGFCL 298
S ++D CK G++E+A ++ + M PN Y L+DGFC
Sbjct: 592 SALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCK 651
Query: 299 TGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVT 358
+ RV A++L +M GC + + Y LI+G CK ++EA + +M G T+ T
Sbjct: 652 SHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYT 711
Query: 359 YSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIG 418
YS+L F+V + + A K+ +M N A + IY IDGLCK G EA +L +
Sbjct: 712 YSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMME 771
Query: 419 NSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMD 478
+ ++++Y+ +IDG IGK+ET EL + + G+ PN VTY ++I C +G +D
Sbjct: 772 EKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALD 831
Query: 479 KAHDLFLDMEAKGVEPDCVIFNTIMLGF 506
AH+L +M+ + ++ GF
Sbjct: 832 VAHNLLEEMKQTHWPTHTAGYRKVIEGF 859
Score = 222 bits (566), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 147/499 (29%), Positives = 234/499 (46%), Gaps = 62/499 (12%)
Query: 73 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILIN--CR---IMEAAAL 127
P S+++ + L + LF+ + GL D+YT++I+++ C+ I +A
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540
Query: 128 FTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTI 187
F ++R GC P+V TY LI+ + A LFE M + C P+ VTY+ +
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG------CLPNIVTYSAL 594
Query: 188 IDGVCKEGFVDKAMELFLQM----------------KDENINPNVVTYNSLIHCFSHADD 231
IDG CK G V+KA ++F +M D + PNVVTY +L+ F +
Sbjct: 595 IDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHR 654
Query: 232 WNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNT 291
EA++L M +G PN + + ++D LCK GK++EA + M + G + Y++
Sbjct: 655 VEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSS 714
Query: 292 LMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKG 351
L+D + R + A ++ M N C +VV YT +I+G CK +EA L + M KG
Sbjct: 715 LIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 774
Query: 352 IRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFV---- 407
+P VVTY+ + G + ++E L+L + M VA + Y ID CKNG +
Sbjct: 775 CQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAH 834
Query: 408 -----------------------------LEALELFCAIGNSKYELDIISYSCLIDGLCK 438
+E+L L IG + Y LID L K
Sbjct: 835 NLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIK 894
Query: 439 IGKLETAWELFQSLS--RVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDC 496
+LE A L + ++ L+ TYN +I LC +++ A LF +M KGV P+
Sbjct: 895 AQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEM 954
Query: 497 VIFNTIMLGFIRNNETSKS 515
F +++ G RN++ S++
Sbjct: 955 QSFCSLIKGLFRNSKISEA 973
Score = 203 bits (516), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 141/497 (28%), Positives = 221/497 (44%), Gaps = 70/497 (14%)
Query: 73 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINCRIMEAAALFTKLR 132
P + L L + ++ + R+ +T P++ T+S L+ C + L R
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL-CGCLNKKQLGRCKR 358
Query: 133 VF------GCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNT 186
V GC P +N+L++ C +G A L ++M P V YN
Sbjct: 359 VLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH------MPGYVVYNI 412
Query: 187 IIDGVCKEG------FVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFI 240
+I +C + +D A + + +M + N + +S C A + +A +
Sbjct: 413 LIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIR 472
Query: 241 KMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTG 300
+M+ QG P+ T+S +++ LC KME A L + M + G+ + + Y ++D FC G
Sbjct: 473 EMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAG 532
Query: 301 RVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYS 360
+ A++ F M GC +VV+YT LI+ Y K K V A L+ ML +G P +VTYS
Sbjct: 533 LIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYS 592
Query: 361 TLFLGLFEVHQVEHALKLFDEM--------------QHNDVAA--DTYIYNTFIDGLCKN 404
L G + QVE A ++F+ M Q++D + + Y +DG CK+
Sbjct: 593 ALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKS 652
Query: 405 GFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGL------- 457
V EA +L A+ E + I Y LIDGLCK+GKL+ A E+ +S G
Sbjct: 653 HRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTY 712
Query: 458 ----------------------------LPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEA 489
PNVV Y MI GLC G+ D+A+ L ME
Sbjct: 713 SSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEE 772
Query: 490 KGVEPDCVIFNTIMLGF 506
KG +P+ V + ++ GF
Sbjct: 773 KGCQPNVVTYTAMIDGF 789
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 128/475 (26%), Positives = 220/475 (46%), Gaps = 38/475 (8%)
Query: 78 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINC-----RIMEAAALFTKLR 132
N+L +N + L RL P T++ LI R+ A+ + ++
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262
Query: 133 VFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVC 192
+ D FT LC+ G AL L E E V PDTV Y +I G+C
Sbjct: 263 LANLRMDGFTLRCFAYSLCKVGKWREALTLVET------ENFV---PDTVFYTKLISGLC 313
Query: 193 KEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVV 252
+ ++AM+ +M+ + PNVVTY++L+ + KR+ MM +G +P+
Sbjct: 314 EASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPK 373
Query: 253 TFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGR------VNHAK 306
F+ +V C +G A +LL M++ G P VYN L+ C ++ A+
Sbjct: 374 IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAE 433
Query: 307 ELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGL 366
+ + M + G + + ++ ++ C E+A ++ R+M+ +G P TYS + L
Sbjct: 434 KAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYL 493
Query: 367 FEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDI 426
++E A LF+EM+ + AD Y Y +D CK G + +A + F + ++
Sbjct: 494 CNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNV 553
Query: 427 ISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLF-- 484
++Y+ LI K K+ A ELF+++ G LPN+VTY+ +I G C GQ++KA +F
Sbjct: 554 VTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFER 613
Query: 485 ---------LDMEAKGVE-----PDCVIFNTIMLGFIRNNETSKSSRGKLMSQMS 525
+DM K + P+ V + ++ GF +++ ++ KL+ MS
Sbjct: 614 MCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEAR--KLLDAMS 666
Score = 155 bits (393), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 116/439 (26%), Positives = 191/439 (43%), Gaps = 62/439 (14%)
Query: 73 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILIN-----------CRI 121
P V ++ L K K LF+ + S G P++ T+S LI+ C+I
Sbjct: 551 PNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQI 610
Query: 122 MEAAA----------LFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 171
E F + P+V TY L++G C++ A L + M+
Sbjct: 611 FERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG- 669
Query: 172 EFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADD 231
C+P+ + Y+ +IDG+CK G +D+A E+ +M + + TY+SLI +
Sbjct: 670 -----CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKR 724
Query: 232 WNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNT 291
+ A ++ KM++ PNVV ++ ++D LCK GK +EA +L+ +M + G PN Y
Sbjct: 725 QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTA 784
Query: 292 LMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNL-------- 343
++DGF + G++ EL M S G + V+Y LI+ CK ++ A NL
Sbjct: 785 MIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTH 844
Query: 344 -------YRKML------------------PKGIRPTVVTYSTLFLGLFEVHQVEHALKL 378
YRK++ P + Y L L + ++E AL+L
Sbjct: 845 WPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRL 904
Query: 379 FDEMQHNDVAADTY--IYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGL 436
+E+ Y YN+ I+ LC V A +LF + ++ S+ LI GL
Sbjct: 905 LEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGL 964
Query: 437 CKIGKLETAWELFQSLSRV 455
+ K+ A L +S +
Sbjct: 965 FRNSKISEALLLLDFISHM 983
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 232 bits (592), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 132/441 (29%), Positives = 228/441 (51%), Gaps = 11/441 (2%)
Query: 65 MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILIN-----C 119
++ + P V S++ + + D V L + + GL P+ Y + +I C
Sbjct: 271 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 330
Query: 120 RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 179
++ EA F+++ G PD Y TLI+G C+ G A F EM + + P
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD------ITP 384
Query: 180 DTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLF 239
D +TY II G C+ G + +A +LF +M + + P+ VT+ LI+ + A +A R+
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 240 IKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLT 299
M+ G PNVVT++ ++D LCK G ++ A+ LL M +IG+ PN F YN++++G C +
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 300 GRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTY 359
G + A +L E+ G D V+YTTL++ YCK+ +++A + ++ML KG++PT+VT+
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 360 STLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGN 419
+ L G +E KL + M +A + +N+ + C + A ++ + +
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 420 SKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDK 479
D +Y L+ G CK ++ AW LFQ + G +V TY+++I G + +
Sbjct: 625 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684
Query: 480 AHDLFLDMEAKGVEPDCVIFN 500
A ++F M +G+ D IF+
Sbjct: 685 AREVFDQMRREGLAADKEIFD 705
Score = 222 bits (566), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 133/454 (29%), Positives = 233/454 (51%), Gaps = 15/454 (3%)
Query: 64 YMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFP-----DLYTHSILIN 118
Y + S P V F++ F L +F+++ + GL ++Y + +
Sbjct: 166 YTYKDWGSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKD 223
Query: 119 C-RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 177
C + A +F + G +V +YN +I+ +C+ G A +L M
Sbjct: 224 CYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKG------Y 277
Query: 178 KPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKR 237
PD ++Y+T+++G C+ G +DK +L MK + + PN Y S+I EA+
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 238 LFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFC 297
F +M+ QG+ P+ V ++ ++D CK G + AS+ M + P+ Y ++ GFC
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 298 LTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVV 357
G + A +LF M G D V++T LINGYCK ++++A ++ M+ G P VV
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 358 TYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAI 417
TY+TL GL + ++ A +L EM + + + YN+ ++GLCK+G + EA++L
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 418 GNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQM 477
+ D ++Y+ L+D CK G+++ A E+ + + GL P +VT+N++++G C G +
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 577
Query: 478 DKAHDLFLDMEAKGVEPDCVIFNTIMLGF-IRNN 510
+ L M AKG+ P+ FN+++ + IRNN
Sbjct: 578 EDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 611
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 133/456 (29%), Positives = 233/456 (51%), Gaps = 13/456 (2%)
Query: 56 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYD-TVLSLFKRLNSTGLFPDLYTHS 114
EA +F+ ML + V S N+ L+K+ + T + +F+ G+ ++ +++
Sbjct: 192 REARRVFEKMLN-YGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250
Query: 115 ILIN-----CRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG 169
I+I+ RI EA L + + G PDV +Y+T++NG CR G L E M
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 170 NGEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHA 229
KP++ Y +II +C+ + +A E F +M + I P+ V Y +LI F
Sbjct: 311 G------LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 230 DDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVY 289
D A + F +M + + P+V+T++ I+ C+ G M EA +L M G+ P++ +
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 290 NTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLP 349
L++G+C G + A + M GC +VV+YTTLI+G CK +++ A L +M
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 350 KGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLE 409
G++P + TY+++ GL + +E A+KL E + + ADT Y T +D CK+G + +
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 410 ALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIH 469
A E+ + + I++++ L++G C G LE +L + G+ PN T+N ++
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVK 604
Query: 470 GLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLG 505
C + A ++ DM ++GV PD + ++ G
Sbjct: 605 QYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 640
Score = 202 bits (514), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 211/387 (54%), Gaps = 15/387 (3%)
Query: 134 FGCEPDVFT--YNTLIN-GLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTV-TYNTIID 189
+G +P VF + L++ GL R A +FE+M N +G+V D+ Y T +
Sbjct: 171 WGSDPRVFDVFFQVLVDFGLLRE-----ARRVFEKMLN----YGLVLSVDSCNVYLTRLS 221
Query: 190 GVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHP 249
C + A+ +F + + + NV +YN +IH EA L + M +G P
Sbjct: 222 KDCYK--TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTP 279
Query: 250 NVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELF 309
+V+++S +V+ C+ G++++ +L+++M + G+ PN+++Y +++ C ++ A+E F
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 310 VSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEV 369
M G + D V YTTLI+G+CK ++ A + +M + I P V+TY+ + G ++
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 370 HQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISY 429
+ A KLF EM + D+ + I+G CK G + +A + + + ++++Y
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 430 SCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEA 489
+ LIDGLCK G L++A EL + ++GL PN+ TYN +++GLC G +++A L + EA
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 490 KGVEPDCVIFNTIMLGFIRNNETSKSS 516
G+ D V + T+M + ++ E K+
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Score = 199 bits (506), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 122/406 (30%), Positives = 194/406 (47%), Gaps = 28/406 (6%)
Query: 98 FKRLNSTGLFPDLYTHSILIN--CR---IMEAAALFTKLRVFGCEPDVFTYNTLINGLCR 152
F + G+ PD ++ LI+ C+ I A+ F ++ PDV TY +I+G C+
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 153 TGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENI 212
G + A LF EM F +PD+VT+ +I+G CK G + A + M
Sbjct: 399 IGDMVEAGKLFHEM------FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 452
Query: 213 NPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASR 272
+PNVVTY +LI D + A L +M G+ PN+ T++ IV+ LCK+G +EEA +
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 512
Query: 273 LLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYC 332
L+ G++ +T Y TLMD +C +G ++ A+E+ M G +V++ L+NG+C
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 333 KTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTY 392
+E+ L ML KGI P T+++L + ++ A ++ +M V D
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
Query: 393 IYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSL 452
Y + G CK + EA LF + + + + +YS LI G K K A E+F +
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
Query: 453 SRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVI 498
R GL + + D F D + KG PD ++
Sbjct: 693 RREGLAAD-----------------KEIFDFFSDTKYKGKRPDTIV 721
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 154/303 (50%), Gaps = 6/303 (1%)
Query: 233 NEAKRLFIKMMDQGVHPNVVTFSVIVDELCKN-GKMEEASRLLDLMIQIGVHPNTFVYNT 291
EA+R+F KM++ G+ +V + +V + L K+ K A + ++GV N YN
Sbjct: 192 REARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNI 251
Query: 292 LMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKG 351
++ C GR+ A L + ME G DV+SY+T++NGYC+ +++ L M KG
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 311
Query: 352 IRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEAL 411
++P Y ++ L + ++ A + F EM + DT +Y T IDG CK G + A
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371
Query: 412 ELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGL 471
+ F + + D+++Y+ +I G C+IG + A +LF + GL P+ VT+ +I+G
Sbjct: 372 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGY 431
Query: 472 CNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKSSRGKLMSQMSSCWSMC 531
C G M A + M G P+ V + T++ G + E S +L+ +M W +
Sbjct: 432 CKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK--EGDLDSANELLHEM---WKIG 486
Query: 532 FQP 534
QP
Sbjct: 487 LQP 489
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 92/209 (44%), Gaps = 13/209 (6%)
Query: 77 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINC-----RIMEAAALFTKL 131
++ L K+ D + K + GL P + T ++L+N + + L +
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Query: 132 RVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPDTVTYNTIIDG 190
G P+ T+N+L+ C + A ++++M + G G PD TY ++ G
Sbjct: 588 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG-------PDGKTYENLVKG 640
Query: 191 VCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPN 250
CK + +A LF +MK + + +V TY+ LI F + EA+ +F +M +G+ +
Sbjct: 641 HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Query: 251 VVTFSVIVDELCKNGKMEEASRLLDLMIQ 279
F D K + + +D +I+
Sbjct: 701 KEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 231 bits (589), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 136/453 (30%), Positives = 233/453 (51%), Gaps = 12/453 (2%)
Query: 68 MHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINCRIMEA--- 124
M SP + +IL G L + + +D+V ++ + S GL PD++ + +L C +
Sbjct: 158 MKCSPDSKACLSILNG-LVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYS 216
Query: 125 --AALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTV 182
L ++ G +P+V+ Y I LCR A +FE M + GV+ P+
Sbjct: 217 KKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMK----KHGVL--PNLY 270
Query: 183 TYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKM 242
TY+ +IDG CK G V +A L+ ++ + PNVV + +L+ F A + A+ LF+ M
Sbjct: 271 TYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHM 330
Query: 243 MDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRV 302
+ GV PN+ ++ ++ CK+G M EA LL M + + P+ F Y L++G C+ +V
Sbjct: 331 VKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQV 390
Query: 303 NHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTL 362
A LF M++ +Y +LI+GYCK N+E+AL+L +M G+ P ++T+STL
Sbjct: 391 AEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTL 450
Query: 363 FLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKY 422
G V ++ A+ L+ EM + D Y ID K + EAL L+ + +
Sbjct: 451 IDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGI 510
Query: 423 ELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHD 482
+ +++CL+DG K G+L A + +Q ++ N V + +I GLC +G + +A
Sbjct: 511 HPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASR 570
Query: 483 LFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKS 515
F DM + G+ PD + +++ G ++ + +
Sbjct: 571 FFSDMRSCGITPDICSYVSMLKGHLQEKRITDT 603
Score = 222 bits (565), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 126/449 (28%), Positives = 236/449 (52%), Gaps = 12/449 (2%)
Query: 73 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILIN--CR---IMEAAAL 127
P V + +LF C K Y L + S G+ P++Y ++I I CR + EA +
Sbjct: 197 PDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKM 256
Query: 128 FTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTI 187
F ++ G P+++TY+ +I+G C+TG+ A L++E+ P+ V + T+
Sbjct: 257 FELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAE------LLPNVVVFGTL 310
Query: 188 IDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGV 247
+DG CK + A LF+ M ++PN+ YN LIH + + EA L +M +
Sbjct: 311 VDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNL 370
Query: 248 HPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKE 307
P+V T++++++ LC ++ EA+RL M + P++ YN+L+ G+C + A +
Sbjct: 371 SPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALD 430
Query: 308 LFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLF 367
L M ++G ++++++TLI+GYC ++++ A+ LY +M KGI P VVTY+ L F
Sbjct: 431 LCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHF 490
Query: 368 EVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDII 427
+ ++ AL+L+ +M + + + + +DG K G + A++ + + + +
Sbjct: 491 KEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHV 550
Query: 428 SYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDM 487
++CLI+GLC+ G + A F + G+ P++ +Y M+ G + ++ L DM
Sbjct: 551 GFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDM 610
Query: 488 EAKGVEPDCVIFNTIMLGFIRNNETSKSS 516
G+ P+ ++ N ++ F + N KS+
Sbjct: 611 IKTGILPNLLV-NQLLARFYQANGYVKSA 638
Score = 199 bits (507), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 126/429 (29%), Positives = 214/429 (49%), Gaps = 11/429 (2%)
Query: 73 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILIN--CR---IMEAAAL 127
P V + I L ++ + +F+ + G+ P+LYT+S +I+ C+ + +A L
Sbjct: 232 PNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGL 291
Query: 128 FTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTI 187
+ ++ V P+V + TL++G C+ + A +LF M +FGV P+ YN +
Sbjct: 292 YKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMV----KFGV--DPNLYVYNCL 345
Query: 188 IDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGV 247
I G CK G + +A+ L +M+ N++P+V TY LI+ D EA RLF KM ++ +
Sbjct: 346 IHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERI 405
Query: 248 HPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKE 307
P+ T++ ++ CK ME+A L M GV PN ++TL+DG+C + A
Sbjct: 406 FPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMG 465
Query: 308 LFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLF 367
L+ M G + DVV+YT LI+ + K N++EAL LY ML GI P T++ L G +
Sbjct: 466 LYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFW 525
Query: 368 EVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDII 427
+ ++ A+ + E + + I+GLC+NG++L A F + + DI
Sbjct: 526 KEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDIC 585
Query: 428 SYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDM 487
SY ++ G + ++ L + + G+LPN++ ++ +G + A L
Sbjct: 586 SYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFLTNSS 645
Query: 488 EAKGVEPDC 496
K V C
Sbjct: 646 RLKTVSNSC 654
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 197/399 (49%), Gaps = 7/399 (1%)
Query: 132 RVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGV 191
R C PD +++NGL R ++ M + G+V PD Y +
Sbjct: 156 REMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISR----GLV--PDVHIYFVLFQCC 209
Query: 192 CKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNV 251
K+G K +L +M I PNV Y I + EA+++F M GV PN+
Sbjct: 210 FKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNL 269
Query: 252 VTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVS 311
T+S ++D CK G + +A L ++ + PN V+ TL+DGFC + A+ LFV
Sbjct: 270 YTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVH 329
Query: 312 MESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQ 371
M G ++ Y LI+G+CK+ N+ EA+ L +M + P V TY+ L GL Q
Sbjct: 330 MVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQ 389
Query: 372 VEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSC 431
V A +LF +M++ + + YN+ I G CK + +AL+L + S E +II++S
Sbjct: 390 VAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFST 449
Query: 432 LIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKG 491
LIDG C + ++ A L+ ++ G++P+VVTY +I + M +A L+ DM G
Sbjct: 450 LIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAG 509
Query: 492 VEPDCVIFNTIMLGFIRNNETSKS-SRGKLMSQMSSCWS 529
+ P+ F ++ GF + S + + +Q SCW+
Sbjct: 510 IHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWN 548
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 181/344 (52%), Gaps = 2/344 (0%)
Query: 160 LNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTY 219
+ LFEE + E C PD+ +I++G+ + D + M + P+V Y
Sbjct: 145 MGLFEEALWVSREMK--CSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIY 202
Query: 220 NSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQ 279
L C +++ ++L +M G+ PNV +++ + +LC++ KMEEA ++ +LM +
Sbjct: 203 FVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKK 262
Query: 280 IGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEE 339
GV PN + Y+ ++DG+C TG V A L+ + + +VV + TL++G+CK + +
Sbjct: 263 HGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVT 322
Query: 340 ALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFID 399
A +L+ M+ G+ P + Y+ L G + + A+ L EM+ +++ D + Y I+
Sbjct: 323 ARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILIN 382
Query: 400 GLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLP 459
GLC V EA LF + N + +Y+ LI G CK +E A +L ++ G+ P
Sbjct: 383 GLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEP 442
Query: 460 NVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIM 503
N++T++ +I G CN + A L+ +M KG+ PD V + ++
Sbjct: 443 NIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALI 486
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 231 bits (588), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 161/520 (30%), Positives = 260/520 (50%), Gaps = 45/520 (8%)
Query: 34 IEKFLKERSKSSGQGDINLITPNEALC-----IFDYM----LRMHPSPPPVSSFNILFGC 84
+++F +RS S +N+I NE L +DY+ + M+ SP +S FN++
Sbjct: 139 VDEFRCKRSVKSFNSVLNVII-NEGLYHRGLEFYDYVVNSNMNMNISPNGLS-FNLVIKA 196
Query: 85 LAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILIN--C---RIMEAAALFTKLRVFGCEPD 139
L K + D + +F+ + PD YT+ L++ C RI EA L +++ GC P
Sbjct: 197 LCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPS 256
Query: 140 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFVDK 199
YN LI+GLC+ G L + M F C P+ VTYNT+I G+C +G +DK
Sbjct: 257 PVIYNVLIDGLCKKGDLTRVTKLVDNM------FLKGCVPNEVTYNTLIHGLCLKGKLDK 310
Query: 200 AMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVD 259
A+ L +M PN VTY +LI+ +A RL M ++G H N +SV++
Sbjct: 311 AVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLIS 370
Query: 260 ELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMH 319
L K GK EEA L M + G PN VY+ L+DG C G+ N AKE+ M ++GC+
Sbjct: 371 GLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLP 430
Query: 320 DVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLF 379
+ +Y++L+ G+ KT EEA+ ++++M G YS L GL V +V+ A+ ++
Sbjct: 431 NAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVW 490
Query: 380 DEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAI---GNSKYELDIISYSCLIDGL 436
+M + DT Y++ I GLC G + AL+L+ + K + D+++Y+ L+DGL
Sbjct: 491 SKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGL 550
Query: 437 CKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGL------CNDGQMDKAHDLFLDMEAK 490
C + A +L S+ G P+V+T N ++ L C+ G+ + ++ +
Sbjct: 551 CMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQ 610
Query: 491 GVEPDCVIFNTIMLGFIRNNETSKSSRGKLMSQMSSCWSM 530
V C I ++ GK ++ +S W+M
Sbjct: 611 RVSGACTIVEVML--------------GKYLAPKTSTWAM 636
Score = 226 bits (575), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 140/491 (28%), Positives = 241/491 (49%), Gaps = 22/491 (4%)
Query: 25 RLTVKDGASIEKFLKERSKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGC 84
R+ +++ IE+ ++ G+ + P++A+ +F M+ V SFN +
Sbjct: 102 RIRLENRVIIERSFIVVFRAYGKAHL----PDKAVDLFHRMVDEFRCKRSVKSFNSVLNV 157
Query: 85 LAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILIN------CRIM---EAAALFTKLRVFG 135
+ Y L + + ++ + ++ + + N C++ A +F +
Sbjct: 158 IINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERK 217
Query: 136 CEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEG 195
C PD +TY TL++GLC+ A+ L +EM + C P V YN +IDG+CK+G
Sbjct: 218 CLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEG------CSPSPVIYNVLIDGLCKKG 271
Query: 196 FVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFS 255
+ + +L M + PN VTYN+LIH ++A L +M+ PN VT+
Sbjct: 272 DLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYG 331
Query: 256 VIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESN 315
+++ L K + +A RLL M + G H N +Y+ L+ G G+ A L+ M
Sbjct: 332 TLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEK 391
Query: 316 GCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHA 375
GC ++V Y+ L++G C+ EA + +M+ G P TYS+L G F+ E A
Sbjct: 392 GCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEA 451
Query: 376 LKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDG 435
++++ EM + + + Y+ IDGLC G V EA+ ++ + + D ++YS +I G
Sbjct: 452 VQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKG 511
Query: 436 LCKIGKLETAWELFQSL---SRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGV 492
LC IG ++ A +L+ + P+VVTYNI++ GLC + +A DL M +G
Sbjct: 512 LCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGC 571
Query: 493 EPDCVIFNTIM 503
+PD + NT +
Sbjct: 572 DPDVITCNTFL 582
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/464 (27%), Positives = 219/464 (47%), Gaps = 53/464 (11%)
Query: 159 ALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENIN----P 214
A++LF M + EF CK ++N++++ + EG + +E + + + N+N P
Sbjct: 131 AVDLFHRMVD---EFR--CKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISP 185
Query: 215 NVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLL 274
N +++N +I + A +F M ++ P+ T+ ++D LCK +++EA LL
Sbjct: 186 NGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLL 245
Query: 275 DLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKT 334
D M G P+ +YN L+DG C G + +L +M GC+ + V+Y TLI+G C
Sbjct: 246 DEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLK 305
Query: 335 KNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIY 394
+++A++L +M+ P VTY TL GL + + A++L M+ + +IY
Sbjct: 306 GKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIY 365
Query: 395 NTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSR 454
+ I GL K G EA+ L+ + + +I+ YS L+DGLC+ GK A E+ +
Sbjct: 366 SVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIA 425
Query: 455 VGLLPNVVT-----------------------------------YNIMIHGLCNDGQMDK 479
G LPN T Y+++I GLC G++ +
Sbjct: 426 SGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKE 485
Query: 480 AHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKSSRGKLMSQMSSCWSMCFQPKTLIC 539
A ++ M G++PD V +++I+ G S + KL +M QP +
Sbjct: 486 AMMVWSKMLTIGIKPDTVAYSSIIKGLC--GIGSMDAALKLYHEMLCQEEPKSQPDVVTY 543
Query: 540 SI---SIMLQKDMSPGDTMFSTALLMDPDCSCDLESLIHNTDLD 580
+I + +QKD+S + ++ L D CD + + NT L+
Sbjct: 544 NILLDGLCMQKDISRAVDLLNSML----DRGCDPDVITCNTFLN 583
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 166/321 (51%), Gaps = 5/321 (1%)
Query: 193 KEGFVDKAMELFLQMKDE-NINPNVVTYNSLIHCFSHADDWNEAKRLFIKM----MDQGV 247
K DKA++LF +M DE +V ++NS+++ + ++ + + M+ +
Sbjct: 124 KAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNI 183
Query: 248 HPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKE 307
PN ++F++++ LCK ++ A + M + P+ + Y TLMDG C R++ A
Sbjct: 184 SPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVL 243
Query: 308 LFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLF 367
L M+S GC V Y LI+G CK ++ L M KG P VTY+TL GL
Sbjct: 244 LLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLC 303
Query: 368 EVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDII 427
+++ A+ L + M + + Y T I+GL K +A+ L ++ Y L+
Sbjct: 304 LKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQH 363
Query: 428 SYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDM 487
YS LI GL K GK E A L++ ++ G PN+V Y++++ GLC +G+ ++A ++ M
Sbjct: 364 IYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRM 423
Query: 488 EAKGVEPDCVIFNTIMLGFIR 508
A G P+ ++++M GF +
Sbjct: 424 IASGCLPNAYTYSSLMKGFFK 444
Score = 95.9 bits (237), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 126/264 (47%), Gaps = 39/264 (14%)
Query: 73 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILIN-------CRIMEAA 125
P + +++L L + + + R+ ++G P+ YT+S L+ C EA
Sbjct: 395 PNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCE--EAV 452
Query: 126 ALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYN 185
++ ++ GC + F Y+ LI+GLC G A+ ++ +M + KPDTV Y+
Sbjct: 453 QVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKM------LTIGIKPDTVAYS 506
Query: 186 TIIDGVCKEGFVDKAMELFLQM---KDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKM 242
+II G+C G +D A++L+ +M ++ P+VVTYN L+ D + A L M
Sbjct: 507 SIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSM 566
Query: 243 MDQGVHPNVVTFSVIVDEL------CKNGK--MEE-------------ASRLLDLMIQIG 281
+D+G P+V+T + ++ L C G+ +EE A ++++M+
Sbjct: 567 LDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKY 626
Query: 282 VHPNTFVYNTLMDGFCLTGRVNHA 305
+ P T + ++ C ++N A
Sbjct: 627 LAPKTSTWAMIVREICKPKKINAA 650
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 117/242 (48%), Gaps = 30/242 (12%)
Query: 55 PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHS 114
PNEA I + M+ P +++ L K + + ++K ++ TG + + +S
Sbjct: 413 PNEAKEILNRMI-ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYS 471
Query: 115 ILIN--C---RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG 169
+LI+ C R+ EA +++K+ G +PD Y+++I GLC G AL L+ EM
Sbjct: 472 VLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQ 531
Query: 170 NGEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHA 229
+PD VTYN ++DG+C + + +A++L M D +P+V+T N+ ++ S
Sbjct: 532 EEPKS---QPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEK 588
Query: 230 DDWNEAKRLFIK---------------------MMDQGVHPNVVTFSVIVDELCKNGKME 268
+ + R F++ M+ + + P T+++IV E+CK K+
Sbjct: 589 SNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKIN 648
Query: 269 EA 270
A
Sbjct: 649 AA 650
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 224 bits (572), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 140/438 (31%), Positives = 224/438 (51%), Gaps = 14/438 (3%)
Query: 73 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILI-----NCRIMEAAAL 127
P + ++N+ L + D + + L G PD+ T++ LI N + EA
Sbjct: 249 PNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVY 308
Query: 128 FTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF-GVVCKPDTVTYNT 186
K+ G EPD +TYNTLI G C+ G +A E G+ F G V PD TY +
Sbjct: 309 LGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLA-----ERIVGDAVFNGFV--PDQFTYRS 361
Query: 187 IIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQG 246
+IDG+C EG ++A+ LF + + I PNV+ YN+LI S+ EA +L +M ++G
Sbjct: 362 LIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKG 421
Query: 247 VHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAK 306
+ P V TF+++V+ LCK G + +A L+ +MI G P+ F +N L+ G+ ++ +A
Sbjct: 422 LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL 481
Query: 307 ELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGL 366
E+ M NG DV +Y +L+NG CKT E+ + Y+ M+ KG P + T++ L L
Sbjct: 482 EILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESL 541
Query: 367 FEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNS-KYELD 425
+++ AL L +EM++ V D + T IDG CKNG + A LF + + K
Sbjct: 542 CRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSS 601
Query: 426 IISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFL 485
+Y+ +I + + A +LFQ + L P+ TY +M+ G C G ++ + L
Sbjct: 602 TPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLL 661
Query: 486 DMEAKGVEPDCVIFNTIM 503
+M G P ++
Sbjct: 662 EMMENGFIPSLTTLGRVI 679
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 139/490 (28%), Positives = 234/490 (47%), Gaps = 35/490 (7%)
Query: 56 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSI 115
EA+ +F+ M + P V S+N + L + ++D ++ R+ G+ PD+Y+ +I
Sbjct: 93 QEAVNVFERM-DFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151
Query: 116 LINC-----RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANG 169
+ R A L + GCE +V Y T++ G LF +M A+G
Sbjct: 152 RMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASG 211
Query: 170 --------NGEFGVVCK--------------------PDTVTYNTIIDGVCKEGFVDKAM 201
N V+CK P+ TYN I G+C+ G +D A+
Sbjct: 212 VSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAV 271
Query: 202 ELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDEL 261
+ + ++ P+V+TYN+LI+ + EA+ KM+++G+ P+ T++ ++
Sbjct: 272 RMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGY 331
Query: 262 CKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDV 321
CK G ++ A R++ + G P+ F Y +L+DG C G N A LF G +V
Sbjct: 332 CKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNV 391
Query: 322 VSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDE 381
+ Y TLI G + EA L +M KG+ P V T++ L GL ++ V A L
Sbjct: 392 ILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKV 451
Query: 382 MQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGK 441
M D + +N I G + ALE+ + ++ + D+ +Y+ L++GLCK K
Sbjct: 452 MISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSK 511
Query: 442 LETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNT 501
E E ++++ G PN+ T+NI++ LC ++D+A L +M+ K V PD V F T
Sbjct: 512 FEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGT 571
Query: 502 IMLGFIRNNE 511
++ GF +N +
Sbjct: 572 LIDGFCKNGD 581
Score = 205 bits (521), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 133/441 (30%), Positives = 214/441 (48%), Gaps = 14/441 (3%)
Query: 75 VSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINCRIMEAAALFTKLRVF 134
+S+FN L L K L ++ G+ P+L+T+++ I + + L +R+
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQ-GLCQRGELDGAVRMV 274
Query: 135 GC------EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTII 188
GC +PDV TYN LI GLC+ A +M N E PD+ TYNT+I
Sbjct: 275 GCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLE------PDSYTYNTLI 328
Query: 189 DGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVH 248
G CK G V A + P+ TY SLI H + N A LF + + +G+
Sbjct: 329 AGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388
Query: 249 PNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKEL 308
PNV+ ++ ++ L G + EA++L + M + G+ P +N L++G C G V+ A L
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448
Query: 309 FVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFE 368
M S G D+ ++ LI+GY +E AL + ML G+ P V TY++L GL +
Sbjct: 449 VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCK 508
Query: 369 VHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIIS 428
+ E ++ + M A + + +N ++ LC+ + EAL L + N D ++
Sbjct: 509 TSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVT 568
Query: 429 YSCLIDGLCKIGKLETAWELFQSLSRV-GLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDM 487
+ LIDG CK G L+ A+ LF+ + + + TYNI+IH + A LF +M
Sbjct: 569 FGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEM 628
Query: 488 EAKGVEPDCVIFNTIMLGFIR 508
+ + PD + ++ GF +
Sbjct: 629 VDRCLGPDGYTYRLMVDGFCK 649
Score = 199 bits (506), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 121/387 (31%), Positives = 191/387 (49%), Gaps = 6/387 (1%)
Query: 120 RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 179
++ EA +F ++ + CEP VF+YN +++ L +G+ A ++ M + P
Sbjct: 91 KVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRG------ITP 144
Query: 180 DTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLF 239
D ++ + CK A+ L M + NVV Y +++ F + E LF
Sbjct: 145 DVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELF 204
Query: 240 IKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLT 299
KM+ GV + TF+ ++ LCK G ++E +LLD +I+ GV PN F YN + G C
Sbjct: 205 GKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQR 264
Query: 300 GRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTY 359
G ++ A + + G DV++Y LI G CK +EA KM+ +G+ P TY
Sbjct: 265 GELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTY 324
Query: 360 STLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGN 419
+TL G + V+ A ++ + N D + Y + IDGLC G AL LF
Sbjct: 325 NTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALG 384
Query: 420 SKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDK 479
+ ++I Y+ LI GL G + A +L +S GL+P V T+NI+++GLC G +
Sbjct: 385 KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444
Query: 480 AHDLFLDMEAKGVEPDCVIFNTIMLGF 506
A L M +KG PD FN ++ G+
Sbjct: 445 ADGLVKVMISKGYFPDIFTFNILIHGY 471
Score = 192 bits (488), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 122/417 (29%), Positives = 206/417 (49%), Gaps = 12/417 (2%)
Query: 96 SLFKRLNSTGLFPDLYTHSILIN--CR---IMEAAALFTKLRVFGCEPDVFTYNTLINGL 150
LF ++ ++G+ L T + L+ C+ + E L K+ G P++FTYN I GL
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 151 CRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDE 210
C+ G A+ + + KPD +TYN +I G+CK +A +M +E
Sbjct: 262 CQRGELDGAVRMVGCLIEQGP------KPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNE 315
Query: 211 NINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEA 270
+ P+ TYN+LI + A+R+ + G P+ T+ ++D LC G+ A
Sbjct: 316 GLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRA 375
Query: 271 SRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLING 330
L + + G+ PN +YNTL+ G G + A +L M G + +V ++ L+NG
Sbjct: 376 LALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNG 435
Query: 331 YCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAAD 390
CK V +A L + M+ KG P + T++ L G ++E+AL++ D M N V D
Sbjct: 436 LCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPD 495
Query: 391 TYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQ 450
Y YN+ ++GLCK + +E + + ++ +++ L++ LC+ KL+ A L +
Sbjct: 496 VYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLE 555
Query: 451 SLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDM-EAKGVEPDCVIFNTIMLGF 506
+ + P+ VT+ +I G C +G +D A+ LF M EA V +N I+ F
Sbjct: 556 EMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAF 612
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 173/334 (51%), Gaps = 2/334 (0%)
Query: 193 KEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVV 252
++G V +A+ +F +M + P V +YN+++ + +++A +++++M D+G+ P+V
Sbjct: 88 RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVY 147
Query: 253 TFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSM 312
+F++ + CK + A RLL+ M G N Y T++ GF ELF M
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM 207
Query: 313 ESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQV 372
++G + ++ L+ CK +V+E L K++ +G+ P + TY+ GL + ++
Sbjct: 208 LASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL 267
Query: 373 EHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCL 432
+ A+++ + D YN I GLCKN EA + N E D +Y+ L
Sbjct: 268 DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTL 327
Query: 433 IDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGV 492
I G CK G ++ A + G +P+ TY +I GLC++G+ ++A LF + KG+
Sbjct: 328 IAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGI 387
Query: 493 EPDCVIFNTIMLGFIRNNETSKSSRGKLMSQMSS 526
+P+ +++NT++ G +N+ +L ++MS
Sbjct: 388 KPNVILYNTLIKGL--SNQGMILEAAQLANEMSE 419
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 149/291 (51%), Gaps = 12/291 (4%)
Query: 73 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILIN-----CRIMEAAAL 127
P V +FNIL L K L K + S G FPD++T +ILI+ ++ A +
Sbjct: 424 PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEI 483
Query: 128 FTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTI 187
+ G +PDV+TYN+L+NGLC+T + ++ M C P+ T+N +
Sbjct: 484 LDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG------CAPNLFTFNIL 537
Query: 188 IDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQ-G 246
++ +C+ +D+A+ L +MK++++NP+ VT+ +LI F D + A LF KM +
Sbjct: 538 LESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYK 597
Query: 247 VHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAK 306
V + T+++I+ + + A +L M+ + P+ + Y ++DGFC TG VN
Sbjct: 598 VSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGY 657
Query: 307 ELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVV 357
+ + M NG + + + +IN C V EA + +M+ KG+ P V
Sbjct: 658 KFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 150/314 (47%), Gaps = 9/314 (2%)
Query: 214 PNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQ-GVHPNVVTFSVIVDELCKNGKMEEASR 272
P VT ++I C D +A +F M + G + T+ ++++L GK E
Sbjct: 7 PKHVT--AVIKC---QKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEE 61
Query: 273 LL-DLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGY 331
+L D+ +G H VY M + G+V A +F M+ C V SY +++
Sbjct: 62 VLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVL 121
Query: 332 CKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADT 391
+ ++A +Y +M +GI P V +++ + + AL+L + M +
Sbjct: 122 VDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNV 181
Query: 392 YIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQS 451
Y T + G + F E ELF + S L + +++ L+ LCK G ++ +L
Sbjct: 182 VAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDK 241
Query: 452 LSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNE 511
+ + G+LPN+ TYN+ I GLC G++D A + + +G +PD + +N ++ G +N++
Sbjct: 242 VIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSK 301
Query: 512 TSKSS--RGKLMSQ 523
++ GK++++
Sbjct: 302 FQEAEVYLGKMVNE 315
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 224 bits (570), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 139/444 (31%), Positives = 222/444 (50%), Gaps = 11/444 (2%)
Query: 77 SFNILFGCLAKNKHYDTVLSLFKRLNSTGL--FPDLYTHSILINCR--IMEAA-ALFTKL 131
++++L L K ++ D L + S G+ P +Y I + + +ME A ALF +
Sbjct: 314 TYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGM 373
Query: 132 RVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGV 191
G P Y +LI G CR + L EM N +V P TY T++ G+
Sbjct: 374 IASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRN----IVISP--YTYGTVVKGM 427
Query: 192 CKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNV 251
C G +D A + +M PNVV Y +LI F + +A R+ +M +QG+ P++
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDI 487
Query: 252 VTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVS 311
++ ++ L K +M+EA L M++ G+ PN F Y + G+ A +
Sbjct: 488 FCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547
Query: 312 MESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQ 371
M G + + V T LIN YCK V EA + YR M+ +GI TY+ L GLF+ +
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Query: 372 VEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSC 431
V+ A ++F EM+ +A D + Y I+G K G + +A +F + ++I Y+
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 432 LIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKG 491
L+ G C+ G++E A EL +S GL PN VTY +I G C G + +A LF +M+ KG
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727
Query: 492 VEPDCVIFNTIMLGFIRNNETSKS 515
+ PD ++ T++ G R N+ ++
Sbjct: 728 LVPDSFVYTTLVDGCCRLNDVERA 751
Score = 219 bits (559), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 131/452 (28%), Positives = 233/452 (51%), Gaps = 16/452 (3%)
Query: 73 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILI-----NCRIMEAAAL 127
P V + L +N + + + K + G+ PD++ ++ LI R+ EA +
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509
Query: 128 FTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTI 187
++ G +P+ FTY I+G A +EM E GV+ P+ V +
Sbjct: 510 LVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR----ECGVL--PNKVLCTGL 563
Query: 188 IDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGV 247
I+ CK+G V +A + M D+ I + TY L++ D ++A+ +F +M +G+
Sbjct: 564 INEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623
Query: 248 HPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKE 307
P+V ++ V+++ K G M++AS + D M++ G+ PN +YN L+ GFC +G + AKE
Sbjct: 624 APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKE 683
Query: 308 LFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLF 367
L M G + V+Y T+I+GYCK+ ++ EA L+ +M KG+ P Y+TL G
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC 743
Query: 368 EVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYEL--- 424
++ VE A+ +F A+ T +N I+ + K G E+ + + ++
Sbjct: 744 RLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGK 802
Query: 425 -DIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDL 483
+ ++Y+ +ID LCK G LE A ELF + L+P V+TY +++G G+ + +
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 484 FLDMEAKGVEPDCVIFNTIMLGFIRNNETSKS 515
F + A G+EPD ++++ I+ F++ T+K+
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKA 894
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 119/425 (28%), Positives = 209/425 (49%), Gaps = 14/425 (3%)
Query: 85 LAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILIN--CR---IMEAAALFTKLRVFGCEPD 139
++K + +LF + ++GL P ++ LI CR + + L +++
Sbjct: 357 MSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVIS 416
Query: 140 VFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPDTVTYNTIIDGVCKEGFVD 198
+TY T++ G+C +G A N+ +EM A+G C+P+ V Y T+I +
Sbjct: 417 PYTYGTVVKGMCSSGDLDGAYNIVKEMIASG-------CRPNVVIYTTLIKTFLQNSRFG 469
Query: 199 KAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIV 258
AM + +MK++ I P++ YNSLI S A +EA+ ++M++ G+ PN T+ +
Sbjct: 470 DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Query: 259 DELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCM 318
+ + A + + M + GV PN + L++ +C G+V A + SM G +
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589
Query: 319 HDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKL 378
D +YT L+NG K V++A ++R+M KGI P V +Y L G ++ ++ A +
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649
Query: 379 FDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCK 438
FDEM + + IYN + G C++G + +A EL + + ++Y +IDG CK
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709
Query: 439 IGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVI 498
G L A+ LF + GL+P+ Y ++ G C +++A +F KG
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAP 768
Query: 499 FNTIM 503
FN ++
Sbjct: 769 FNALI 773
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 217/460 (47%), Gaps = 34/460 (7%)
Query: 92 DTVLSLFKRLNSTGLFPDLYTHSILINC-----RIMEAAALFTKLRVFGCEPDVFTYNTL 146
D L L + + GL P YT+ +LI+ R+ +A +L ++ G D TY+ L
Sbjct: 259 DGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLL 318
Query: 147 INGLCRTGHTIVALNLFEEMANGN---------------GEFGVVCK------------- 178
I+GL + + A L EM + + GV+ K
Sbjct: 319 IDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGL 378
Query: 179 -PDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKR 237
P Y ++I+G C+E V + EL ++MK NI + TY +++ + D + A
Sbjct: 379 IPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYN 438
Query: 238 LFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFC 297
+ +M+ G PNVV ++ ++ +N + +A R+L M + G+ P+ F YN+L+ G
Sbjct: 439 IVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLS 498
Query: 298 LTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVV 357
R++ A+ V M NG + +Y I+GY + A ++M G+ P V
Sbjct: 499 KAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKV 558
Query: 358 TYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAI 417
+ L + +V A + M + D Y ++GL KN V +A E+F +
Sbjct: 559 LCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM 618
Query: 418 GNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQM 477
D+ SY LI+G K+G ++ A +F + GL PNV+ YN+++ G C G++
Sbjct: 619 RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI 678
Query: 478 DKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKSSR 517
+KA +L +M KG+ P+ V + TI+ G+ ++ + +++ R
Sbjct: 679 EKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718
Score = 196 bits (497), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 127/438 (28%), Positives = 218/438 (49%), Gaps = 26/438 (5%)
Query: 72 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINCRI-----MEAAA 126
P + +N L L+K K D S + GL P+ +T+ I+ I A
Sbjct: 484 APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADK 543
Query: 127 LFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNT 186
++R G P+ LIN C+ G I A + + M + G G D TY
Sbjct: 544 YVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVD-QGILG-----DAKTYTV 597
Query: 187 IIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQG 246
+++G+ K VD A E+F +M+ + I P+V +Y LI+ FS + +A +F +M+++G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 247 VHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAK 306
+ PNV+ +++++ C++G++E+A LLD M G+HPN Y T++DG+C +G + A
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 307 ELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGL 366
LF M+ G + D YTTL++G C+ +VE A+ ++ KG + ++ L +
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWV 776
Query: 367 FEVHQVEHALKLFDEM---------QHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAI 417
F+ + E ++ + + + NDV YN ID LCK G + A ELF +
Sbjct: 777 FKFGKTELKTEVLNRLMDGSFDRFGKPNDVT-----YNIMIDYLCKEGNLEAAKELFHQM 831
Query: 418 GNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQM 477
N+ +I+Y+ L++G K+G+ + +F G+ P+ + Y+++I+ +G
Sbjct: 832 QNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMT 891
Query: 478 DKAHDLFLDMEAKGVEPD 495
KA L M AK D
Sbjct: 892 TKALVLVDQMFAKNAVDD 909
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/482 (24%), Positives = 209/482 (43%), Gaps = 56/482 (11%)
Query: 73 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINCRIMEAAALFTKLR 132
P +S +L L + D ++K + + D+ T+ +LI K
Sbjct: 184 PRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDV 243
Query: 133 VFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK---PDTVTYNTIID 189
+F E + T ++G AL L E M +CK P TY+ +ID
Sbjct: 244 LFKTEKEFRTATLNVDG---------ALKLKESM---------ICKGLVPLKYTYDVLID 285
Query: 190 GVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHP 249
G+CK ++ A L ++M ++ + TY+ LI + + AK L +M+ G++
Sbjct: 286 GLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINI 345
Query: 250 NVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELF 309
+ + + K G ME+A L D MI G+ P Y +L++G+C V EL
Sbjct: 346 KPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELL 405
Query: 310 VSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEV 369
V M+ + +Y T++ G C + +++ A N+ ++M+ G RP VV Y+TL +
Sbjct: 406 VEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQN 465
Query: 370 HQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISY 429
+ A+++ EM+ +A D + YN+ I GL K + EA + + + + +Y
Sbjct: 466 SRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTY 525
Query: 430 SCLIDG-----------------------------------LCKIGKLETAWELFQSLSR 454
I G CK GK+ A ++S+
Sbjct: 526 GAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVD 585
Query: 455 VGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSK 514
G+L + TY ++++GL + ++D A ++F +M KG+ PD + ++ GF + K
Sbjct: 586 QGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQK 645
Query: 515 SS 516
+S
Sbjct: 646 AS 647
Score = 159 bits (403), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 188/405 (46%), Gaps = 46/405 (11%)
Query: 77 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINC-----RIMEAAALFTKL 131
++ +L L KN D +F+ + G+ PD++++ +LIN + +A+++F ++
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Query: 132 RVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGV 191
G P+V YN L+ G CR+G A L +EM+ P+ VTY TIIDG
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG------LHPNAVTYCTIIDGY 707
Query: 192 CKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNV 251
CK G + +A LF +MK + + P+ Y +L+ +D A +F +G +
Sbjct: 708 CKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASST 766
Query: 252 VTFSVIVDELCKNGKMEEAS----RLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKE 307
F+ +++ + K GK E + RL+D PN YN ++D C G + AKE
Sbjct: 767 APFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKE 826
Query: 308 LFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLF 367
LF M++ M V++YT+L+NGY K E ++ + + GI P + YS +
Sbjct: 827 LFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFL 886
Query: 368 EVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDII 427
+ AL L D+M + N DG CK L I
Sbjct: 887 KEGMTTKALVLVDQM---------FAKNAVDDG-CK--------------------LSIS 916
Query: 428 SYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLC 472
+ L+ G K+G++E A ++ +++ R+ +P+ T +I+ C
Sbjct: 917 TCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 172/404 (42%), Gaps = 34/404 (8%)
Query: 137 EPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP-------------DTVT 183
E + +++ L LC G AL++ E M N V D V
Sbjct: 94 EQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVL 153
Query: 184 YNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMM 243
+ + DG +G++++A+ +F + P + L+ + + ++ M+
Sbjct: 154 FGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMV 213
Query: 244 DQGVHPNVVTFSVIVDELCKNGKME---------------------EASRLLDLMIQIGV 282
++ V +V T+ +++ C+ G ++ A +L + MI G+
Sbjct: 214 ERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGL 273
Query: 283 HPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALN 342
P + Y+ L+DG C R+ AK L V M+S G D +Y+ LI+G K +N + A
Sbjct: 274 VPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKG 333
Query: 343 LYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLC 402
L +M+ GI Y + + +E A LFD M + + Y + I+G C
Sbjct: 334 LVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYC 393
Query: 403 KNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVV 462
+ V + EL + + +Y ++ G+C G L+ A+ + + + G PNVV
Sbjct: 394 REKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVV 453
Query: 463 TYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGF 506
Y +I + + A + +M+ +G+ PD +N++++G
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGL 497
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 145/323 (44%), Gaps = 43/323 (13%)
Query: 56 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSI 115
+A IFD M+ P V +N+L G ++ + L ++ GL P+ T+
Sbjct: 644 QKASSIFDEMVE-EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 116 LIN--CR---IMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG- 169
+I+ C+ + EA LF ++++ G PD F Y TL++G CR A+ +F G
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGC 762
Query: 170 -------------------------------NGEFGVVCKPDTVTYNTIIDGVCKEGFVD 198
+G F KP+ VTYN +ID +CKEG ++
Sbjct: 763 ASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLE 822
Query: 199 KAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIV 258
A ELF QM++ N+ P V+TY SL++ + E +F + + G+ P+ + +SVI+
Sbjct: 823 AAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVII 882
Query: 259 DELCKNGKMEEASRLLDLM-----IQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSME 313
+ K G +A L+D M + G + L+ GF G + A+++ +M
Sbjct: 883 NAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMV 942
Query: 314 SNGCMHDVVSYTTLINGYCKTKN 336
+ D + LIN C + N
Sbjct: 943 RLQYIPDSATVIELINESCISSN 965
Score = 102 bits (255), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 156/383 (40%), Gaps = 72/383 (18%)
Query: 191 VCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPN 250
+C G +KA+ + +M + N P ++S++ C F+ D GV
Sbjct: 107 LCNFGSFEKALSVVERMIERNW-PVAEVWSSIVRCSQE----------FVGKSDDGV--- 152
Query: 251 VVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFV 310
F ++ D G +EEA + + + + P L+D R++ +++
Sbjct: 153 --LFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYK 210
Query: 311 SMESNGCMHDVVSYTTLINGYCK---------------------TKNVEEALNLYRKMLP 349
M + DV +Y LI +C+ T NV+ AL L M+
Sbjct: 211 GMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMIC 270
Query: 350 KGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGL-------- 401
KG+ P TY L GL ++ ++E A L EM V+ D + Y+ IDGL
Sbjct: 271 KGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADA 330
Query: 402 ---------------------------CKNGFVLEALELFCAIGNSKYELDIISYSCLID 434
K G + +A LF + S +Y+ LI+
Sbjct: 331 AKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIE 390
Query: 435 GLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEP 494
G C+ + +EL + + ++ + TY ++ G+C+ G +D A+++ +M A G P
Sbjct: 391 GYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRP 450
Query: 495 DCVIFNTIMLGFIRNNETSKSSR 517
+ VI+ T++ F++N+ + R
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMR 473
>sp|Q9ZUA2|PP141_ARATH Pentatricopeptide repeat-containing protein At2g01740
OS=Arabidopsis thaliana GN=At2g01740 PE=3 SV=1
Length = 559
Score = 224 bits (570), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 143/487 (29%), Positives = 238/487 (48%), Gaps = 55/487 (11%)
Query: 73 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILIN--CR---IMEAAAL 127
P SSFN + + K + + G PD+ +++ LI+ CR I A+ +
Sbjct: 54 PHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLV 113
Query: 128 FTKLRV---FGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTY 184
LR F C+PD+ ++N+L NG + + + +E+ G C P+ VTY
Sbjct: 114 LESLRASHGFICKPDIVSFNSLFNGFSK-------MKMLDEVFVYMGVMLKCCSPNVVTY 166
Query: 185 NTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMD 244
+T ID CK G + A++ F MK + ++PNVVT+ LI + A D A L+ +M
Sbjct: 167 STWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRR 226
Query: 245 QGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGF-------- 296
+ NVVT++ ++D CK G+M+ A + M++ V PN+ VY T++DGF
Sbjct: 227 VRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDN 286
Query: 297 ---------------------------CLTGRVNHAKELFVSMESNGCMHDVVSYTTLIN 329
C G++ A E+ ME + + D+V +TT++N
Sbjct: 287 AMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMN 346
Query: 330 GYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAA 389
Y K+ ++ A+N+Y K++ +G P VV ST+ G+ + Q+ A+ F + NDV
Sbjct: 347 AYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDV-- 404
Query: 390 DTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELF 449
+Y ID LCK G +E LF I + D Y+ I GLCK G L A++L
Sbjct: 405 ---MYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLK 461
Query: 450 QSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRN 509
+ + GLL +++ Y +I+GL + G M +A +F +M G+ PD +F+ ++ + +
Sbjct: 462 TRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKE 521
Query: 510 NETSKSS 516
+ +S
Sbjct: 522 GNMAAAS 528
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 212/427 (49%), Gaps = 52/427 (12%)
Query: 94 VLSLFKRLNSTGLFPDLYT-----HSIL-INCRIMEAAALFTKLRVFGCEPDVFTYNTLI 147
L RL + PD +T H ++ NC I+ + L G P ++N+++
Sbjct: 5 ALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGIL-SLKFLAYLVSRGYTPHRSSFNSVV 63
Query: 148 NGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQM 207
+ +C+ G A E++ + FG C+PD ++YN++IDG C+ G + A + +
Sbjct: 64 SFVCKLGQVKFA----EDIVHSMPRFG--CEPDVISYNSLIDGHCRNGDIRSASLVLESL 117
Query: 208 KDEN---INPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKN 264
+ + P++V++NSL + FS +KM+D+ V + ++ + C
Sbjct: 118 RASHGFICKPDIVSFNSLFNGFSK-----------MKMLDE-----VFVYMGVMLKCCS- 160
Query: 265 GKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSY 324
PN Y+T +D FC +G + A + F SM+ + +VV++
Sbjct: 161 -------------------PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTF 201
Query: 325 TTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQH 384
T LI+GYCK ++E A++LY++M + VVTY+ L G + +++ A +++ M
Sbjct: 202 TCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVE 261
Query: 385 NDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLET 444
+ V ++ +Y T IDG + G A++ + N LDI +Y +I GLC GKL+
Sbjct: 262 DRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKE 321
Query: 445 AWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIML 504
A E+ + + + L+P++V + M++ G+M A +++ + +G EPD V +T++
Sbjct: 322 ATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMID 381
Query: 505 GFIRNNE 511
G +N +
Sbjct: 382 GIAKNGQ 388
Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 175/353 (49%), Gaps = 39/353 (11%)
Query: 197 VDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSV 256
V +A++ +++ + P+ T N IH +++ + + ++ +G P+ +F+
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61
Query: 257 IVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSME-SN 315
+V +CK G+++ A ++ M + G P+ YN+L+DG C G + A + S+ S+
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121
Query: 316 G--CMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVE 373
G C D+VS+ +L NG+ K K ++E +Y ++ K P VVTYST + +++
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVTYSTWIDTFCKSGELQ 180
Query: 374 HALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLI 433
ALK F M+ + ++ + + IDG CK G + A+ L+ + + L++++Y+ LI
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI 240
Query: 434 DGLCKIGKLETAWELFQSLSRVGLLPN--------------------------------- 460
DG CK G+++ A E++ + + PN
Sbjct: 241 DGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMR 300
Query: 461 --VVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNE 511
+ Y ++I GLC +G++ +A ++ DME + PD VIF T+M + ++
Sbjct: 301 LDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGR 353
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 223 bits (569), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 129/456 (28%), Positives = 232/456 (50%), Gaps = 11/456 (2%)
Query: 65 MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINC----- 119
+LR + + N L G L + + +++ ++ +G+ ++YT +I++N
Sbjct: 190 LLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDG 249
Query: 120 RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 179
++ + ++++ G PD+ TYNTLI+ G A L M G G P
Sbjct: 250 KMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMP-GKG-----FSP 303
Query: 180 DTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLF 239
TYNT+I+G+CK G ++A E+F +M ++P+ TY SL+ D E +++F
Sbjct: 304 GVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVF 363
Query: 240 IKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLT 299
M + V P++V FS ++ ++G +++A + + + G+ P+ +Y L+ G+C
Sbjct: 364 SDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRK 423
Query: 300 GRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTY 359
G ++ A L M GC DVV+Y T+++G CK K + EA L+ +M + + P T
Sbjct: 424 GMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTL 483
Query: 360 STLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGN 419
+ L G ++ +++A++LF +M+ + D YNT +DG K G + A E++ + +
Sbjct: 484 TILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVS 543
Query: 420 SKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDK 479
+ ISYS L++ LC G L A+ ++ + + P V+ N MI G C G
Sbjct: 544 KEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASD 603
Query: 480 AHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKS 515
M ++G PDC+ +NT++ GF+R SK+
Sbjct: 604 GESFLEKMISEGFVPDCISYNTLIYGFVREENMSKA 639
Score = 219 bits (559), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 123/448 (27%), Positives = 231/448 (51%), Gaps = 13/448 (2%)
Query: 75 VSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINCR-----IMEAAALFT 129
V + NI+ L K+ + V + ++ G++PD+ T++ LI+ + EA L
Sbjct: 235 VYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMN 294
Query: 130 KLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIID 189
+ G P V+TYNT+INGLC+ G A +F EM PD+ TY +++
Sbjct: 295 AMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG------LSPDSTTYRSLLM 348
Query: 190 GVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHP 249
CK+G V + ++F M+ ++ P++V ++S++ F+ + + ++A F + + G+ P
Sbjct: 349 EACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIP 408
Query: 250 NVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELF 309
+ V +++++ C+ G + A L + M+Q G + YNT++ G C + A +LF
Sbjct: 409 DNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLF 468
Query: 310 VSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEV 369
M D + T LI+G+CK N++ A+ L++KM K IR VVTY+TL G +V
Sbjct: 469 NEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKV 528
Query: 370 HQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISY 429
++ A +++ +M ++ Y+ ++ LC G + EA ++ + + + ++
Sbjct: 529 GDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMIC 588
Query: 430 SCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEA 489
+ +I G C+ G + + G +P+ ++YN +I+G + M KA L ME
Sbjct: 589 NSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEE 648
Query: 490 K--GVEPDCVIFNTIMLGFIRNNETSKS 515
+ G+ PD +N+I+ GF R N+ ++
Sbjct: 649 EQGGLVPDVFTYNSILHGFCRQNQMKEA 676
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 213/430 (49%), Gaps = 13/430 (3%)
Query: 73 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILI--NCR---IMEAAAL 127
P V ++N + L K+ Y+ +F + +GL PD T+ L+ C+ ++E +
Sbjct: 303 PGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKV 362
Query: 128 FTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTI 187
F+ +R PD+ ++++++ R+G+ AL F N E G++ PD V Y +
Sbjct: 363 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF----NSVKEAGLI--PDNVIYTIL 416
Query: 188 IDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGV 247
I G C++G + AM L +M + +VVTYN+++H EA +LF +M ++ +
Sbjct: 417 IQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERAL 476
Query: 248 HPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKE 307
P+ T ++++D CK G ++ A L M + + + YNTL+DGF G ++ AKE
Sbjct: 477 FPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKE 536
Query: 308 LFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLF 367
++ M S + +SY+ L+N C ++ EA ++ +M+ K I+PTV+ +++ G
Sbjct: 537 IWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYC 596
Query: 368 EVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYEL--D 425
++M D YNT I G + + +A L + + L D
Sbjct: 597 RSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPD 656
Query: 426 IISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFL 485
+ +Y+ ++ G C+ +++ A + + + G+ P+ TY MI+G + + +A +
Sbjct: 657 VFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHD 716
Query: 486 DMEAKGVEPD 495
+M +G PD
Sbjct: 717 EMLQRGFSPD 726
Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 151/315 (47%), Gaps = 2/315 (0%)
Query: 211 NINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEA 270
N N ++ LI + A EA F + +G ++ + ++ L + G +E A
Sbjct: 160 NCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELA 219
Query: 271 SRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLING 330
+ + + GV N + N +++ C G++ ++ G D+V+Y TLI+
Sbjct: 220 WGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISA 279
Query: 331 YCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAAD 390
Y +EEA L M KG P V TY+T+ GL + + E A ++F EM + ++ D
Sbjct: 280 YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339
Query: 391 TYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQ 450
+ Y + + CK G V+E ++F + + D++ +S ++ + G L+ A F
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399
Query: 451 SLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNN 510
S+ GL+P+ V Y I+I G C G + A +L +M +G D V +NTI+ G +
Sbjct: 400 SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459
Query: 511 ETSKSSRGKLMSQMS 525
++ KL ++M+
Sbjct: 460 MLGEAD--KLFNEMT 472
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 223 bits (568), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 139/495 (28%), Positives = 254/495 (51%), Gaps = 15/495 (3%)
Query: 25 RLTVKDGASIEKFLKERSKSSGQGDINLITPNEALCIFDYML---RMH-PSPPPVSSFNI 80
RL + G KFLK K G +++ + +CI ++L RM+ P+ + ++
Sbjct: 44 RLRLVHGKLALKFLKWVVKQPGLETDHIV---QLVCITTHILVRARMYDPARHILKELSL 100
Query: 81 LFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINCRIMEAAALFTKLRVFGCEPDV 140
+ G + + +++ ++ NS D+ L I ++ +F + ++G P V
Sbjct: 101 MSG--KSSFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSV 158
Query: 141 FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFVDKA 200
+T N ++ + ++G + + +EM +C PD T+N +I+ +C EG +K+
Sbjct: 159 YTCNAILGSVVKSGEDVSVWSFLKEMLKRK-----IC-PDVATFNILINVLCAEGSFEKS 212
Query: 201 MELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDE 260
L +M+ P +VTYN+++H + + A L M +GV +V T+++++ +
Sbjct: 213 SYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHD 272
Query: 261 LCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHD 320
LC++ ++ + LL M + +HPN YNTL++GF G+V A +L M S G +
Sbjct: 273 LCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPN 332
Query: 321 VVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFD 380
V++ LI+G+ N +EAL ++ M KG+ P+ V+Y L GL + + + A +
Sbjct: 333 HVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYM 392
Query: 381 EMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIG 440
M+ N V Y IDGLCKNGF+ EA+ L + + DI++YS LI+G CK+G
Sbjct: 393 RMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVG 452
Query: 441 KLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFN 500
+ +TA E+ + RVGL PN + Y+ +I+ C G + +A ++ M +G D FN
Sbjct: 453 RFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFN 512
Query: 501 TIMLGFIRNNETSKS 515
++ + + +++
Sbjct: 513 VLVTSLCKAGKVAEA 527
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 135/467 (28%), Positives = 238/467 (50%), Gaps = 12/467 (2%)
Query: 56 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSI 115
++L IF M ++ P V + N + G + K+ +V S K + + PD+ T +I
Sbjct: 140 QDSLEIFRLM-GLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNI 198
Query: 116 LINCRIME-----AAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 170
LIN E ++ L K+ G P + TYNT+++ C+ G A+ L + M +
Sbjct: 199 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSK- 257
Query: 171 GEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHAD 230
GV D TYN +I +C+ + K L M+ I+PN VTYN+LI+ FS+
Sbjct: 258 ---GV--DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEG 312
Query: 231 DWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYN 290
A +L +M+ G+ PN VTF+ ++D G +EA ++ +M G+ P+ Y
Sbjct: 313 KVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYG 372
Query: 291 TLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPK 350
L+DG C + A+ ++ M+ NG ++YT +I+G CK ++EA+ L +M
Sbjct: 373 VLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKD 432
Query: 351 GIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEA 410
GI P +VTYS L G +V + + A ++ + ++ + IY+T I C+ G + EA
Sbjct: 433 GIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEA 492
Query: 411 LELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHG 470
+ ++ A+ + D +++ L+ LCK GK+ A E + ++ G+LPN V+++ +I+G
Sbjct: 493 IRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLING 552
Query: 471 LCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKSSR 517
N G+ KA +F +M G P + +++ G + ++ +
Sbjct: 553 YGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEK 599
Score = 209 bits (533), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 128/472 (27%), Positives = 231/472 (48%), Gaps = 13/472 (2%)
Query: 51 NLITPNEALCIFDYMLRMHPSP--PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFP 108
+++ E + ++ ++ M P V++FNIL L ++ L +++ +G P
Sbjct: 167 SVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAP 226
Query: 109 DLYTHSILINC-----RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLF 163
+ T++ +++ R A L ++ G + DV TYN LI+ LCR+ L
Sbjct: 227 TIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLL 286
Query: 164 EEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLI 223
+M + P+ VTYNT+I+G EG V A +L +M ++PN VT+N+LI
Sbjct: 287 RDMRKR------MIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALI 340
Query: 224 HCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVH 283
++ EA ++F M +G+ P+ V++ V++D LCKN + + A M + GV
Sbjct: 341 DGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVC 400
Query: 284 PNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNL 343
Y ++DG C G ++ A L M +G D+V+Y+ LING+CK + A +
Sbjct: 401 VGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI 460
Query: 344 YRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCK 403
++ G+ P + YSTL + ++ A+++++ M D + +N + LCK
Sbjct: 461 VCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCK 520
Query: 404 NGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVT 463
G V EA E + + + +S+ CLI+G G+ A+ +F +++VG P T
Sbjct: 521 AGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFT 580
Query: 464 YNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKS 515
Y ++ GLC G + +A + A D V++NT++ ++ +K+
Sbjct: 581 YGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKA 632
Score = 209 bits (532), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 141/503 (28%), Positives = 247/503 (49%), Gaps = 23/503 (4%)
Query: 27 TVKDG--ASIEKFLKERSKSSGQGD-------INLITPNEALCIFDYML-RMHPS--PPP 74
VK G S+ FLKE K D IN++ + Y++ +M S P
Sbjct: 168 VVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPT 227
Query: 75 VSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILIN--CR---IMEAAALFT 129
+ ++N + K + + L + S G+ D+ T+++LI+ CR I + L
Sbjct: 228 IVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLR 287
Query: 130 KLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIID 189
+R P+ TYNTLING G ++A L EM + FG+ P+ VT+N +ID
Sbjct: 288 DMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLS----FGL--SPNHVTFNALID 341
Query: 190 GVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHP 249
G EG +A+++F M+ + + P+ V+Y L+ +++ A+ +++M GV
Sbjct: 342 GHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCV 401
Query: 250 NVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELF 309
+T++ ++D LCKNG ++EA LL+ M + G+ P+ Y+ L++GFC GR AKE+
Sbjct: 402 GRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIV 461
Query: 310 VSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEV 369
+ G + + Y+TLI C+ ++EA+ +Y M+ +G T++ L L +
Sbjct: 462 CRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKA 521
Query: 370 HQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISY 429
+V A + M + + +T ++ I+G +G L+A +F + + +Y
Sbjct: 522 GKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTY 581
Query: 430 SCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEA 489
L+ GLCK G L A + +SL V + V YN ++ +C G + KA LF +M
Sbjct: 582 GSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQ 641
Query: 490 KGVEPDCVIFNTIMLGFIRNNET 512
+ + PD + +++ G R +T
Sbjct: 642 RSILPDSYTYTSLISGLCRKGKT 664
Score = 206 bits (525), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 136/458 (29%), Positives = 223/458 (48%), Gaps = 14/458 (3%)
Query: 66 LRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINCRI---- 121
+R P ++N L + L + S GL P+ T + LI+ I
Sbjct: 289 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 348
Query: 122 -MEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPD 180
EA +F + G P +Y L++GLC+ +A + M NG VC
Sbjct: 349 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKR-NG----VC-VG 402
Query: 181 TVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFI 240
+TY +IDG+CK GF+D+A+ L +M + I+P++VTY++LI+ F + AK +
Sbjct: 403 RITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVC 462
Query: 241 KMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTG 300
++ G+ PN + +S ++ C+ G ++EA R+ + MI G + F +N L+ C G
Sbjct: 463 RIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAG 522
Query: 301 RVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYS 360
+V A+E M S+G + + VS+ LINGY + +A +++ +M G PT TY
Sbjct: 523 KVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYG 582
Query: 361 TLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNS 420
+L GL + + A K + A DT +YNT + +CK+G + +A+ LF +
Sbjct: 583 SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR 642
Query: 421 KYELDIISYSCLIDGLCKIGKLETAWELF--QSLSRVGLLPNVVTYNIMIHGLCNDGQMD 478
D +Y+ LI GLC+ GK A LF ++ +R +LPN V Y + G+ GQ
Sbjct: 643 SILPDSYTYTSLISGLCRKGKTVIAI-LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWK 701
Query: 479 KAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKSS 516
M+ G PD V N ++ G+ R + K++
Sbjct: 702 AGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTN 739
Score = 196 bits (497), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 129/454 (28%), Positives = 223/454 (49%), Gaps = 13/454 (2%)
Query: 67 RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINCRIM--EA 124
R+ S P V ++IL + L +F+ + G P +YT + ++ + E
Sbjct: 117 RLCNSNPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGED 174
Query: 125 AALFTKLRVFGCE---PDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDT 181
++++ L+ PDV T+N LIN LC G + L ++M P
Sbjct: 175 VSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSG------YAPTI 228
Query: 182 VTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIK 241
VTYNT++ CK+G A+EL MK + ++ +V TYN LIH ++ + L
Sbjct: 229 VTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRD 288
Query: 242 MMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGR 301
M + +HPN VT++ +++ GK+ AS+LL+ M+ G+ PN +N L+DG G
Sbjct: 289 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 348
Query: 302 VNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYST 361
A ++F ME+ G VSY L++G CK + A Y +M G+ +TY+
Sbjct: 349 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 408
Query: 362 LFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSK 421
+ GL + ++ A+ L +EM + + D Y+ I+G CK G A E+ C I
Sbjct: 409 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 468
Query: 422 YELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAH 481
+ I YS LI C++G L+ A +++++ G + T+N+++ LC G++ +A
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 528
Query: 482 DLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKS 515
+ M + G+ P+ V F+ ++ G+ + E K+
Sbjct: 529 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKA 562
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/496 (25%), Positives = 221/496 (44%), Gaps = 48/496 (9%)
Query: 57 EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSIL 116
EAL +F YM+ P S+ +L L KN +D + R+ G+ T++ +
Sbjct: 351 EALKMF-YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 409
Query: 117 IN--CR---IMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 171
I+ C+ + EA L ++ G +PD+ TY+ LING C+ G A + +
Sbjct: 410 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI----- 464
Query: 172 EFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADD 231
+ V P+ + Y+T+I C+ G + +A+ ++ M E + T+N L+ A
Sbjct: 465 -YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 523
Query: 232 WNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNT 291
EA+ M G+ PN V+F +++ +G+ +A + D M ++G HP F Y +
Sbjct: 524 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 583
Query: 292 LMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKG 351
L+ G C G + A++ S+ + D V Y TL+ CK+ N+ +A++L+ +M+ +
Sbjct: 584 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 643
Query: 352 IRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQ-HNDVAADTYIYNTFIDGLCKNGFVLEA 410
I P TY++L GL + A+ E + +V + +Y F+DG+ K G
Sbjct: 644 ILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAG 703
Query: 411 LELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHG 470
+ + N + DI++ + +IDG ++GK+E +L + PN+ TYNI++HG
Sbjct: 704 IYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHG 763
Query: 471 -----------------------------------LCNDGQMDKAHDLFLDMEAKGVEPD 495
+C ++ + +GVE D
Sbjct: 764 YSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVD 823
Query: 496 CVIFNTIMLGFIRNNE 511
FN ++ N E
Sbjct: 824 RYTFNMLISKCCANGE 839
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 134/507 (26%), Positives = 226/507 (44%), Gaps = 74/507 (14%)
Query: 57 EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSIL 116
+A +FD M ++ P + ++L G L K H K L++ D ++ L
Sbjct: 561 KAFSVFDEMTKVGHHPTFFTYGSLLKG-LCKGGHLREAEKFLKSLHAVPAAVDTVMYNTL 619
Query: 117 IN--CR---IMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 171
+ C+ + +A +LF ++ PD +TY +LI+GLCR G T++A+ LF + A G
Sbjct: 620 LTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI-LFAKEAEARG 678
Query: 172 ----------------------EFGVVCK---------PDTVTYNTIIDGVCKEGFVDKA 200
+ G+ + PD VT N +IDG + G ++K
Sbjct: 679 NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT 738
Query: 201 MELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDE 260
+L +M ++N PN+ TYN L+H +S D + + L+ ++ G+ P+ +T +V
Sbjct: 739 NDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLG 798
Query: 261 LCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSM-------- 312
+C++ +E ++L I GV + + +N L+ C G +N A +L M
Sbjct: 799 ICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLD 858
Query: 313 ------------------ESNGCMHDVV---------SYTTLINGYCKTKNVEEALNLYR 345
ES +H++ Y LING C+ +++ A +
Sbjct: 859 KDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKE 918
Query: 346 KMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNG 405
+M+ I P V S + L + + + A L M + + T + CKNG
Sbjct: 919 EMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNG 978
Query: 406 FVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYN 465
V+EALEL + N +LD++SY+ LI GLC G + A+EL++ + G L N TY
Sbjct: 979 NVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYK 1038
Query: 466 IMIHGLCNDGQMDKAHDLFL-DMEAKG 491
+I GL D+ L D+ A+G
Sbjct: 1039 ALIRGLLARETAFSGADIILKDLLARG 1065
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 223 bits (568), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 143/484 (29%), Positives = 236/484 (48%), Gaps = 20/484 (4%)
Query: 68 MHPSPPPVSS-FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYT-HSILINC------ 119
+H SPPP + F+I L +F+++ L P+L T +++LI
Sbjct: 123 LHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSS 182
Query: 120 -RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK 178
I A +F + G +V T+N L+NG C G AL + E M + EF V
Sbjct: 183 FSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVS---EFKV--N 237
Query: 179 PDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRL 238
PD VTYNTI+ + K+G + EL L MK + PN VTYN+L++ + EA ++
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQI 297
Query: 239 FIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCL 298
M V P++ T++++++ LC G M E L+D M + + P+ YNTL+DG
Sbjct: 298 VELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFE 357
Query: 299 TGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLP-KGIRPTVV 357
G A++L ME++G + V++ + CK + E ++++ G P +V
Sbjct: 358 LGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIV 417
Query: 358 TYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAI 417
TY TL +V + AL++ EM + +T NT +D LCK + EA L +
Sbjct: 418 TYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSA 477
Query: 418 GNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQM 477
+ +D ++Y LI G + K+E A E++ + +V + P V T+N +I GLC+ G+
Sbjct: 478 HKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKT 537
Query: 478 DKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKSSRGKLMSQMSSCWSMCFQPKTL 537
+ A + F ++ G+ PD FN+I+LG+ + K+ + F+P
Sbjct: 538 ELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKA-----FEFYNESIKHSFKPDNY 592
Query: 538 ICSI 541
C+I
Sbjct: 593 TCNI 596
Score = 216 bits (551), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 137/465 (29%), Positives = 235/465 (50%), Gaps = 13/465 (2%)
Query: 57 EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSIL 116
+AL + + M+ P ++N + ++K + L + GL P+ T++ L
Sbjct: 222 DALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNL 281
Query: 117 IN--CRI---MEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 171
+ C++ EA + ++ PD+ TYN LINGLC G L L + M +
Sbjct: 282 VYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKS--- 338
Query: 172 EFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADD 231
+ +PD VTYNT+IDG + G +A +L QM+++ + N VT+N + +
Sbjct: 339 ---LKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEK 395
Query: 232 WNEAKRLFIKMMD-QGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYN 290
R +++D G P++VT+ ++ K G + A ++ M Q G+ NT N
Sbjct: 396 REAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLN 455
Query: 291 TLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPK 350
T++D C +++ A L S G + D V+Y TLI G+ + + VE+AL ++ +M
Sbjct: 456 TILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKV 515
Query: 351 GIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEA 410
I PTV T+++L GL + E A++ FDE+ + + D +N+ I G CK G V +A
Sbjct: 516 KITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKA 575
Query: 411 LELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHG 470
E + ++ D + + L++GLCK G E A F +L + + VTYN MI
Sbjct: 576 FEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISA 634
Query: 471 LCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKS 515
C D ++ +A+DL +ME KG+EPD +N+ + + + + S++
Sbjct: 635 FCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSET 679
Score = 149 bits (376), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 196/417 (47%), Gaps = 37/417 (8%)
Query: 56 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSI 115
E L + D M + P V+ ++ GC + L +++ + G+ + TH+I
Sbjct: 327 REGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLE-ARKLMEQMENDGVKANQVTHNI 385
Query: 116 LIN--CRIMEAAALFTKLR----VFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG 169
+ C+ + A+ K++ + G PD+ TY+TLI + G AL + EM
Sbjct: 386 SLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREM--- 442
Query: 170 NGEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHA 229
G+ G+ K +T+T NTI+D +CKE +D+A L + VTY +LI F
Sbjct: 443 -GQKGI--KMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFRE 499
Query: 230 DDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVY 289
+ +A ++ +M + P V TF+ ++ LC +GK E A D + + G+ P+ +
Sbjct: 500 EKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTF 559
Query: 290 NTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLP 349
N+++ G+C GRV A E + + D + L+NG CK E+ALN + ++
Sbjct: 560 NSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIE 619
Query: 350 KGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLE 409
+ TV TY+T+ + +++ A L EM+ + D + YN+FI L ++G + E
Sbjct: 620 EREVDTV-TYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSE 678
Query: 410 ALELF---------------------CAIGNSKYEL--DIISYSCLIDGLCKIGKLE 443
EL A SK EL + I+YS +ID LC G+L+
Sbjct: 679 TDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLK 735
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 113/244 (46%), Gaps = 36/244 (14%)
Query: 57 EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSIL 116
+AL ++D M ++ +P VS+FN L G L + + + F L +GL PD T + +
Sbjct: 504 KALEMWDEMKKVKITPT-VSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSI 562
Query: 117 I-----NCRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNG 171
I R+ +A + + +PD +T N L+NGLC+ G T ALN F +
Sbjct: 563 ILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER- 621
Query: 172 EFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADD 231
+ DTVTYNT+I CK+ + +A +L +M+++ + P+ TYNS I
Sbjct: 622 ------EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGK 675
Query: 232 WNEAKRLFIKMM-----------------------DQGVHPNVVTFSVIVDELCKNGKME 268
+E L K + ++ + +S ++DELC G+++
Sbjct: 676 LSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLK 735
Query: 269 EASR 272
E SR
Sbjct: 736 EHSR 739
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 223 bits (567), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 139/442 (31%), Positives = 224/442 (50%), Gaps = 11/442 (2%)
Query: 77 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILI-----NCRIMEAAALFTKL 131
S+N L L K++ + +++R+ G P L T+S L+ I L ++
Sbjct: 190 SYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM 249
Query: 132 RVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGV 191
G +P+V+T+ I L R G A + + M + C PD VTY +ID +
Sbjct: 250 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEG------CGPDVVTYTVLIDAL 303
Query: 192 CKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNV 251
C +D A E+F +MK P+ VTY +L+ FS D + K+ + +M G P+V
Sbjct: 304 CTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDV 363
Query: 252 VTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVS 311
VTF+++VD LCK G EA LD+M G+ PN YNTL+ G R++ A ELF +
Sbjct: 364 VTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGN 423
Query: 312 MESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQ 371
MES G +Y I+ Y K+ + AL + KM KGI P +V + L + +
Sbjct: 424 MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGR 483
Query: 372 VEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSC 431
A ++F ++ + D+ YN + K G + EA++L + + E D+I +
Sbjct: 484 DREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNS 543
Query: 432 LIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKG 491
LI+ L K +++ AW++F + + L P VVTYN ++ GL +G++ +A +LF M KG
Sbjct: 544 LINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG 603
Query: 492 VEPDCVIFNTIMLGFIRNNETS 513
P+ + FNT+ +N+E +
Sbjct: 604 CPPNTITFNTLFDCLCKNDEVT 625
Score = 216 bits (549), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 142/486 (29%), Positives = 234/486 (48%), Gaps = 36/486 (7%)
Query: 57 EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSIL 116
EA+ ++ M+ + P + +++ L L K + D+V+ L K + + GL P++YT +I
Sbjct: 206 EAMEVYRRMI-LEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTIC 264
Query: 117 INC-----RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANG-- 169
I +I EA + ++ GC PDV TY LI+ LC A +FE+M G
Sbjct: 265 IRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRH 324
Query: 170 ----------------NGEFGVVCK-----------PDTVTYNTIIDGVCKEGFVDKAME 202
N + V + PD VT+ ++D +CK G +A +
Sbjct: 325 KPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFD 384
Query: 203 LFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELC 262
M+D+ I PN+ TYN+LI ++A LF M GV P T+ V +D
Sbjct: 385 TLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYG 444
Query: 263 KNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVV 322
K+G A + M G+ PN N + GR AK++F ++ G + D V
Sbjct: 445 KSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSV 504
Query: 323 SYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEM 382
+Y ++ Y K ++EA+ L +M+ G P V+ ++L L++ +V+ A K+F M
Sbjct: 505 TYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564
Query: 383 QHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKL 442
+ + YNT + GL KNG + EA+ELF + + I+++ L D LCK ++
Sbjct: 565 KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEV 624
Query: 443 ETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTI 502
A ++ + +G +P+V TYN +I GL +GQ+ +A F M+ K V PD V T+
Sbjct: 625 TLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTL 683
Query: 503 MLGFIR 508
+ G ++
Sbjct: 684 LPGVVK 689
Score = 205 bits (522), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 142/504 (28%), Positives = 245/504 (48%), Gaps = 34/504 (6%)
Query: 4 SSISENEPSDPTTTAKLKESLRLTVKDGASIEKFLKERSKSSGQGDINLITPNEALCIFD 63
S I ++ D +++ ++ L+ +S F S G++NL+ E +
Sbjct: 72 SMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYF------KSVAGNLNLVHTTETC---N 122
Query: 64 YMLRMHPSPPPVSSFNILFGCLAKN---KHYDTVLSLFKRLNSTGLFPDLYTHSILINCR 120
YML + +F + K + +T L++FK L+ G
Sbjct: 123 YMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKG--------------G 168
Query: 121 IMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPD 180
+ +A K+R FG + ++YN LI+ L ++ A+ ++ M +P
Sbjct: 169 LKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEG------FRPS 222
Query: 181 TVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFI 240
TY++++ G+ K +D M L +M+ + PNV T+ I A NEA +
Sbjct: 223 LQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILK 282
Query: 241 KMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVH-PNTFVYNTLMDGFCLT 299
+M D+G P+VVT++V++D LC K++ A + + M + G H P+ Y TL+D F
Sbjct: 283 RMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKM-KTGRHKPDRVTYITLLDRFSDN 341
Query: 300 GRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTY 359
++ K+ + ME +G + DVV++T L++ CK N EA + M +GI P + TY
Sbjct: 342 RDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTY 401
Query: 360 STLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGN 419
+TL GL VH+++ AL+LF M+ V Y Y FID K+G + ALE F +
Sbjct: 402 NTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKT 461
Query: 420 SKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDK 479
+I++ + + L K G+ A ++F L +GL+P+ VTYN+M+ G++D+
Sbjct: 462 KGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDE 521
Query: 480 AHDLFLDMEAKGVEPDCVIFNTIM 503
A L +M G EPD ++ N+++
Sbjct: 522 AIKLLSEMMENGCEPDVIVVNSLI 545
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/395 (30%), Positives = 201/395 (50%), Gaps = 19/395 (4%)
Query: 81 LFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILI-----NCR---IMEAAALFTKL- 131
L G + D +S +RL + G+ D SIL+ +C+ + A LF K
Sbjct: 719 LIGSILAEAGIDNAVSFSERLVANGICRD--GDSILVPIIRYSCKHNNVSGARTLFEKFT 776
Query: 132 RVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGV 191
+ G +P + TYN LI GL +A ++F ++ + C PD TYN ++D
Sbjct: 777 KDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTG------CIPDVATYNFLLDAY 830
Query: 192 CKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMM-DQGVHPN 250
K G +D+ EL+ +M N +T+N +I A + ++A L+ +M D+ P
Sbjct: 831 GKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPT 890
Query: 251 VVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFV 310
T+ ++D L K+G++ EA +L + M+ G PN +YN L++GF G + A LF
Sbjct: 891 ACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFK 950
Query: 311 SMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVH 370
M G D+ +Y+ L++ C V+E L+ ++++ G+ P VV Y+ + GL + H
Sbjct: 951 RMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSH 1010
Query: 371 QVEHALKLFDEMQ-HNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISY 429
++E AL LF+EM+ + D Y YN+ I L G V EA +++ I + E ++ ++
Sbjct: 1011 RLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTF 1070
Query: 430 SCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTY 464
+ LI G GK E A+ ++Q++ G PN TY
Sbjct: 1071 NALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 144/517 (27%), Positives = 244/517 (47%), Gaps = 63/517 (12%)
Query: 56 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSI 115
+EA+ + M+ + P V N L L K D +F R+ L P + T++
Sbjct: 520 DEAIKLLSEMME-NGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNT 578
Query: 116 LI-----NCRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALN-LFEEMANG 169
L+ N +I EA LF + GC P+ T+NTL + LC+ +AL LF+ M G
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG 638
Query: 170 NGEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHA 229
C PD TYNTII G+ K G V +AM F QMK + + P+ VT +L+ A
Sbjct: 639 -------CVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKA 690
Query: 230 DDWNEAKRLFIKMM----DQGVH----------------PNVVTFS--VIVDELCKNG-- 265
+A ++ + DQ + N V+FS ++ + +C++G
Sbjct: 691 SLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDS 750
Query: 266 -------------KMEEASRLLDLMIQ-IGVHPNTFVYNTLMDGFCLTGRVNHAKELFVS 311
+ A L + + +GV P YN L+ G + A+++F+
Sbjct: 751 ILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQ 810
Query: 312 MESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQ 371
++S GC+ DV +Y L++ Y K+ ++E LY++M +T++ + GL +
Sbjct: 811 VKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGN 870
Query: 372 VEHALKLF-DEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYS 430
V+ AL L+ D M D + Y IDGL K+G + EA +LF + + + Y+
Sbjct: 871 VDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYN 930
Query: 431 CLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAK 490
LI+G K G+ + A LF+ + + G+ P++ TY++++ LC G++D+ F +++
Sbjct: 931 ILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKES 990
Query: 491 GVEPDCVIFNTIMLGFIRNNETS---------KSSRG 518
G+ PD V +N I+ G +++ K+SRG
Sbjct: 991 GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRG 1027
Score = 182 bits (461), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 144/514 (28%), Positives = 229/514 (44%), Gaps = 76/514 (14%)
Query: 56 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSI 115
EA+ +F+ M++ PP +FN LF CL KN L + ++ G PD++T++
Sbjct: 590 QEAIELFEGMVQ-KGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNT 648
Query: 116 LI-----NCRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRT-----GHTIVA------ 159
+I N ++ EA F +++ PD T TL+ G+ + + I+
Sbjct: 649 IIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNC 707
Query: 160 ----LNLFEEMANGN--GEFGV--------------VCKPDTVTYNTIIDGVCKEGFVDK 199
NLF E G+ E G+ +C+ II CK V
Sbjct: 708 ADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSG 767
Query: 200 AMELFLQM-KDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIV 258
A LF + KD + P + TYN LI AD A+ +F+++ G P+V T++ ++
Sbjct: 768 ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLL 827
Query: 259 DELCKNGKMEEASRL------------------------------------LDLMIQIGV 282
D K+GK++E L DLM
Sbjct: 828 DAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDF 887
Query: 283 HPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALN 342
P Y L+DG +GR+ AK+LF M GC + Y LING+ K + A
Sbjct: 888 SPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACA 947
Query: 343 LYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLC 402
L+++M+ +G+RP + TYS L L V +V+ L F E++ + + D YN I+GL
Sbjct: 948 LFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLG 1007
Query: 403 KNGFVLEALELFCAIGNSK-YELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNV 461
K+ + EAL LF + S+ D+ +Y+ LI L G +E A +++ + R GL PNV
Sbjct: 1008 KSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNV 1067
Query: 462 VTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPD 495
T+N +I G G+ + A+ ++ M G P+
Sbjct: 1068 FTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 161/331 (48%), Gaps = 46/331 (13%)
Query: 73 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINC-----RIMEAAAL 127
P + ++N+L G L + + +F ++ STG PD+ T++ L++ +I E L
Sbjct: 783 PKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFEL 842
Query: 128 FTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTI 187
+ ++ CE + T+N +I+GL + G+ AL+L+ ++ + + +F P TY +
Sbjct: 843 YKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMS-DRDF----SPTACTYGPL 897
Query: 188 IDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGV 247
IDG+ K G + +A +LF M D PN YN LI+ F A + + A LF +M+ +GV
Sbjct: 898 IDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGV 957
Query: 248 HPNVVTFSVIVDELCKNGKMEE-----------------------------ASRLLDLMI 278
P++ T+SV+VD LC G+++E + RL + ++
Sbjct: 958 RPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALV 1017
Query: 279 QI-------GVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGY 331
G+ P+ + YN+L+ + G V A +++ ++ G +V ++ LI GY
Sbjct: 1018 LFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGY 1077
Query: 332 CKTKNVEEALNLYRKMLPKGIRPTVVTYSTL 362
+ E A +Y+ M+ G P TY L
Sbjct: 1078 SLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 138/268 (51%), Gaps = 13/268 (4%)
Query: 69 HPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLF-PDLYTHSILINC-----RIM 122
H + NI+ L K + D L L+ L S F P T+ LI+ R+
Sbjct: 849 HECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLY 908
Query: 123 EAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTV 182
EA LF + +GC P+ YN LING + G A LF+ M + GV +PD
Sbjct: 909 EAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMV----KEGV--RPDLK 962
Query: 183 TYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKM 242
TY+ ++D +C G VD+ + F ++K+ +NP+VV YN +I+ + EA LF +M
Sbjct: 963 TYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1022
Query: 243 -MDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGR 301
+G+ P++ T++ ++ L G +EEA ++ + + + G+ PN F +N L+ G+ L+G+
Sbjct: 1023 KTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGK 1082
Query: 302 VNHAKELFVSMESNGCMHDVVSYTTLIN 329
HA ++ +M + G + +Y L N
Sbjct: 1083 PEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 139/291 (47%), Gaps = 35/291 (12%)
Query: 253 TFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSM 312
T + +++ L +GK+EE + + DLM + + +T Y T+ + G + A M
Sbjct: 120 TCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKM 179
Query: 313 ESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQV 372
G + + SY LI+ K++ EA+ +YR+M+ +G RP++ TYS+L +GL + +
Sbjct: 180 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDI 239
Query: 373 EHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCL 432
+ + L EM+ + + Y + I L + G + EA E+ + + D+++Y+ L
Sbjct: 240 DSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 299
Query: 433 IDGLCKIGKLETAWELFQSLS-------RV----------------------------GL 457
ID LC KL+ A E+F+ + RV G
Sbjct: 300 IDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGH 359
Query: 458 LPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIR 508
+P+VVT+ I++ LC G +A D M +G+ P+ +NT++ G +R
Sbjct: 360 VPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLR 410
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 120/243 (49%), Gaps = 12/243 (4%)
Query: 56 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSI 115
++AL ++ ++ P ++ L L+K+ LF+ + G P+ ++I
Sbjct: 872 DDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNI 931
Query: 116 LIN-----CRIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 170
LIN A ALF ++ G PD+ TY+ L++ LC G L+ F+E+
Sbjct: 932 LINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELK--- 988
Query: 171 GEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMK-DENINPNVVTYNSLIHCFSHA 229
E G+ PD V YN II+G+ K +++A+ LF +MK I P++ TYNSLI A
Sbjct: 989 -ESGL--NPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIA 1045
Query: 230 DDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVY 289
EA +++ ++ G+ PNV TF+ ++ +GK E A + M+ G PNT Y
Sbjct: 1046 GMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Query: 290 NTL 292
L
Sbjct: 1106 EQL 1108
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 222 bits (565), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 132/455 (29%), Positives = 235/455 (51%), Gaps = 12/455 (2%)
Query: 67 RMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILIN--CRIME- 123
R S P V ++N + CL K D L +F+ + P+L T++ILI+ CR +
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKL 393
Query: 124 --AAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDT 181
A L ++ G P+V T N +++ LC++ A +FEEM VC PD
Sbjct: 394 DTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYK------VCTPDE 447
Query: 182 VTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIK 241
+T+ ++IDG+ K G VD A +++ +M D + N + Y SLI F + + +++
Sbjct: 448 ITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKD 507
Query: 242 MMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGR 301
M++Q P++ + +D + K G+ E+ + + + P+ Y+ L+ G G
Sbjct: 508 MINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGF 567
Query: 302 VNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYST 361
N ELF SM+ GC+ D +Y +I+G+CK V +A L +M KG PTVVTY +
Sbjct: 568 ANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGS 627
Query: 362 LFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSK 421
+ GL ++ +++ A LF+E + + + IY++ IDG K G + EA + +
Sbjct: 628 VIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687
Query: 422 YELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAH 481
++ +++ L+D L K ++ A FQS+ + PN VTY I+I+GLC + +KA
Sbjct: 688 LTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAF 747
Query: 482 DLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKSS 516
+ +M+ +G++P + + T++ G + +++
Sbjct: 748 VFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG 782
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 129/462 (27%), Positives = 240/462 (51%), Gaps = 13/462 (2%)
Query: 56 NEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSI 115
+EAL +F+ M + + P +S++NIL L + DT L + GLFP++ T +I
Sbjct: 360 DEALKVFEEMKK--DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNI 417
Query: 116 LIN--CR---IMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 170
+++ C+ + EA A+F ++ C PD T+ +LI+GL + G A ++E+M + +
Sbjct: 418 MVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSD 477
Query: 171 GEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHAD 230
C+ +++ Y ++I G + +++ M ++N +P++ N+ + C A
Sbjct: 478 ------CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAG 531
Query: 231 DWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYN 290
+ + + +F ++ + P+ ++S+++ L K G E L M + G +T YN
Sbjct: 532 EPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYN 591
Query: 291 TLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPK 350
++DGFC G+VN A +L M++ G VV+Y ++I+G K ++EA L+ + K
Sbjct: 592 IVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 651
Query: 351 GIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEA 410
I VV YS+L G +V +++ A + +E+ + + Y +N+ +D L K + EA
Sbjct: 652 RIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEA 711
Query: 411 LELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHG 470
L F ++ K + ++Y LI+GLCK+ K A+ +Q + + G+ P+ ++Y MI G
Sbjct: 712 LVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISG 771
Query: 471 LCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNET 512
L G + +A LF +A G PD +N ++ G N
Sbjct: 772 LAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRA 813
Score = 218 bits (554), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 133/478 (27%), Positives = 232/478 (48%), Gaps = 35/478 (7%)
Query: 65 MLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILIN-----C 119
M+R P S++ L G + H D +L+LF+++ G P ++ + LI
Sbjct: 158 MMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEG 217
Query: 120 RIMEAAALFTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEM-ANG--------N 170
R+ A +L +++ + D+ YN I+ + G +A F E+ ANG
Sbjct: 218 RVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYT 277
Query: 171 GEFGVVCK--------------------PDTVTYNTIIDGVCKEGFVDKAMELFLQMKDE 210
GV+CK P T YNT+I G G D+A L + + +
Sbjct: 278 SMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAK 337
Query: 211 NINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEA 270
P+V+ YN ++ C +EA ++F + M + PN+ T+++++D LC+ GK++ A
Sbjct: 338 GSIPSVIAYNCILTCLRKMGKVDEALKVF-EEMKKDAAPNLSTYNILIDMLCRAGKLDTA 396
Query: 271 SRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLING 330
L D M + G+ PN N ++D C + +++ A +F M+ C D +++ +LI+G
Sbjct: 397 FELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDG 456
Query: 331 YCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAAD 390
K V++A +Y KML R + Y++L F + E K++ +M + + + D
Sbjct: 457 LGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPD 516
Query: 391 TYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQ 450
+ NT++D + K G + +F I ++ D SYS LI GL K G +ELF
Sbjct: 517 LQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFY 576
Query: 451 SLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIR 508
S+ G + + YNI+I G C G+++KA+ L +M+ KG EP V + +++ G +
Sbjct: 577 SMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK 634
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 214/448 (47%), Gaps = 12/448 (2%)
Query: 73 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILI-----NCRIMEAAAL 127
P ++ + G L K D + +F+ L P Y ++ +I + EA +L
Sbjct: 271 PDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSL 330
Query: 128 FTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTI 187
+ R G P V YN ++ L + G AL +FEEM P+ TYN +
Sbjct: 331 LERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKD-------AAPNLSTYNIL 383
Query: 188 IDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGV 247
ID +C+ G +D A EL M+ + PNV T N ++ + +EA +F +M +
Sbjct: 384 IDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVC 443
Query: 248 HPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKE 307
P+ +TF ++D L K G++++A ++ + M+ N+ VY +L+ F GR +
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHK 503
Query: 308 LFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLF 367
++ M + C D+ T ++ K E+ ++ ++ + P +YS L GL
Sbjct: 504 IYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLI 563
Query: 368 EVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDII 427
+ +LF M+ DT YN IDG CK G V +A +L + +E ++
Sbjct: 564 KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV 623
Query: 428 SYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDM 487
+Y +IDGL KI +L+ A+ LF+ + NVV Y+ +I G G++D+A+ + ++
Sbjct: 624 TYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEEL 683
Query: 488 EAKGVEPDCVIFNTIMLGFIRNNETSKS 515
KG+ P+ +N+++ ++ E +++
Sbjct: 684 MQKGLTPNLYTWNSLLDALVKAEEINEA 711
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 166/323 (51%), Gaps = 11/323 (3%)
Query: 97 LFKRLNSTGLFPDLYTHSILINCRIM-----EAAALFTKLRVFGCEPDVFTYNTLINGLC 151
++K + + PDL + ++C + A+F +++ PD +Y+ LI+GL
Sbjct: 504 IYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLI 563
Query: 152 RTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDEN 211
+ G LF M C DT YN +IDG CK G V+KA +L +MK +
Sbjct: 564 KAGFANETYELFYSMKEQG------CVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG 617
Query: 212 INPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEAS 271
P VVTY S+I + D +EA LF + + + NVV +S ++D K G+++EA
Sbjct: 618 FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAY 677
Query: 272 RLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGY 331
+L+ ++Q G+ PN + +N+L+D +N A F SM+ C + V+Y LING
Sbjct: 678 LILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGL 737
Query: 332 CKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADT 391
CK + +A +++M +G++P+ ++Y+T+ GL + + A LFD + N D+
Sbjct: 738 CKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDS 797
Query: 392 YIYNTFIDGLCKNGFVLEALELF 414
YN I+GL ++A LF
Sbjct: 798 ACYNAMIEGLSNGNRAMDAFSLF 820
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 177/365 (48%), Gaps = 7/365 (1%)
Query: 142 TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFVDKAM 201
+YN+L+ + R + + EM+ FG P T ++ G K + +
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAG--FG----PSVNTCIEMVLGCVKANKLREGY 153
Query: 202 ELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDEL 261
++ M+ P Y +LI FS + + LF +M + G P V F+ ++
Sbjct: 154 DVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGF 213
Query: 262 CKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDV 321
K G+++ A LLD M + + +YN +D F G+V+ A + F +E+NG D
Sbjct: 214 AKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDE 273
Query: 322 VSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDE 381
V+YT++I CK ++EA+ ++ + P Y+T+ +G + + A L +
Sbjct: 274 VTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLER 333
Query: 382 MQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGK 441
+ YN + L K G V EAL++F + ++ +Y+ LID LC+ GK
Sbjct: 334 QRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAP-NLSTYNILIDMLCRAGK 392
Query: 442 LETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNT 501
L+TA+EL S+ + GL PNV T NIM+ LC ++D+A +F +M+ K PD + F +
Sbjct: 393 LDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCS 452
Query: 502 IMLGF 506
++ G
Sbjct: 453 LIDGL 457
Score = 155 bits (392), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 157/337 (46%), Gaps = 11/337 (3%)
Query: 73 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINCRIM-----EAAAL 127
P + N C+ K + ++F+ + + PD ++SILI+ I E L
Sbjct: 515 PDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYEL 574
Query: 128 FTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTI 187
F ++ GC D YN +I+G C+ G A L EEM E P VTY ++
Sbjct: 575 FYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE------PTVVTYGSV 628
Query: 188 IDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGV 247
IDG+ K +D+A LF + K + I NVV Y+SLI F +EA + ++M +G+
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688
Query: 248 HPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKE 307
PN+ T++ ++D L K ++ EA M ++ PN Y L++G C + N A
Sbjct: 689 TPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFV 748
Query: 308 LFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLF 367
+ M+ G +SYTT+I+G K N+ EA L+ + G P Y+ + GL
Sbjct: 749 FWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLS 808
Query: 368 EVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKN 404
++ A LF+E + + +D L KN
Sbjct: 809 NGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKN 845
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 182/419 (43%), Gaps = 44/419 (10%)
Query: 197 VDKAMELFLQMKDENINPNV-VTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFS 255
V++A+E F + P+ +YNSL+ + +++ ++ +M G P+V T
Sbjct: 78 VNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCI 137
Query: 256 VIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESN 315
+V K K+ E ++ +M + P Y TL+ F + LF M+
Sbjct: 138 EMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQEL 197
Query: 316 GCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHA 375
G V +TTLI G+ K V+ AL+L +M + +V Y+ +V +V+ A
Sbjct: 198 GYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMA 257
Query: 376 LKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELF----------CAIG------- 418
K F E++ N + D Y + I LCK + EA+E+F C
Sbjct: 258 WKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMG 317
Query: 419 -------NSKYEL-----------DIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPN 460
+ Y L +I+Y+C++ L K+GK++ A ++F+ + + PN
Sbjct: 318 YGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAPN 376
Query: 461 VVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKSSRGKL 520
+ TYNI+I LC G++D A +L M+ G+ P+ N ++ ++ + ++ +
Sbjct: 377 LSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEAC--AM 434
Query: 521 MSQMSSCWSMCFQPKTLICSISIMLQKDMSPGDTMFSTALLMDPDCSCD---LESLIHN 576
+M + +C + CS+ L K D ++D DC + SLI N
Sbjct: 435 FEEMD--YKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKN 491
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 11/209 (5%)
Query: 78 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINC-----RIMEAAALFTKLR 132
++ L K D + + L GL P+LYT + L++ I EA F ++
Sbjct: 660 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMK 719
Query: 133 VFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVC 192
C P+ TY LINGLC+ A ++EM KP T++Y T+I G+
Sbjct: 720 ELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQG------MKPSTISYTTMISGLA 773
Query: 193 KEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVV 252
K G + +A LF + K P+ YN++I S+ + +A LF + +G+ +
Sbjct: 774 KAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNK 833
Query: 253 TFSVIVDELCKNGKMEEASRLLDLMIQIG 281
T V++D L KN +E+A+ + ++ + G
Sbjct: 834 TCVVLLDTLHKNDCLEQAAIVGAVLRETG 862
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 219 bits (559), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 154/541 (28%), Positives = 254/541 (46%), Gaps = 89/541 (16%)
Query: 55 PNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHS 114
P++AL +F M + P + S+N L + K + V SLF + G+ P+L T++
Sbjct: 94 PDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYN 153
Query: 115 ILI--NCRIMEAAALFTKLRVF-------GCEPDVFTYNTLINGLCRTGHTIVALNLFEE 165
+LI +C+ E F K R F G +PDVF+Y+T+IN L + G AL LF+E
Sbjct: 154 VLIKMSCKKKE----FEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDE 209
Query: 166 MANGNGEFGVVCKPDTVTYNTIIDGVCKE------------------------------- 194
M+ E GV PD YN +IDG KE
Sbjct: 210 MS----ERGVA--PDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMIS 263
Query: 195 -----GFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHP 249
G VD ++++ +MK ++ TY+SLIH A + ++A+ +F ++ ++
Sbjct: 264 GLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASI 323
Query: 250 NVVTFSVIVDELCK----------------------------------NGKMEEASRLLD 275
+VVT++ ++ C+ NGK++EA+ +
Sbjct: 324 DVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWR 383
Query: 276 LMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTK 335
LM G + Y + G C+ G VN A + +ES+G DV +Y ++I+ CK K
Sbjct: 384 LMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKK 443
Query: 336 NVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYN 395
+EEA NL ++M G+ + L GL ++ A EM N YN
Sbjct: 444 RLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYN 503
Query: 396 TFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRV 455
I GLCK G EA + + ++ D+ +YS L+ GLC+ K++ A EL+ +
Sbjct: 504 ILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQS 563
Query: 456 GLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKS 515
GL +V+ +NI+IHGLC+ G++D A + +ME + + V +NT+M GF + +++++
Sbjct: 564 GLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRA 623
Query: 516 S 516
+
Sbjct: 624 T 624
Score = 209 bits (532), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 142/491 (28%), Positives = 239/491 (48%), Gaps = 49/491 (9%)
Query: 57 EALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSIL 116
+A D+M + P V S++ + LAK D L LF ++ G+ PD+ ++IL
Sbjct: 167 KARGFLDWMWK-EGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNIL 225
Query: 117 INCRIME-----AAALFTKL-RVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGN 170
I+ + E A L+ +L P+V T+N +I+GL + G L ++E M
Sbjct: 226 IDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNE 285
Query: 171 GEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHAD 230
E D TY+++I G+C G VDKA +F ++ + + +VVTYN+++ F
Sbjct: 286 RE------KDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCG 339
Query: 231 DWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYN 290
E+ L+ ++M+ N+V++++++ L +NGK++EA+ + LM G + Y
Sbjct: 340 KIKESLELW-RIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYG 398
Query: 291 TLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPK 350
+ G C+ G VN A + +ES+G DV +Y ++I+ CK K +EEA NL ++M
Sbjct: 399 IFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKH 458
Query: 351 GI-----------------------------------RPTVVTYSTLFLGLFEVHQVEHA 375
G+ RPTVV+Y+ L GL + + A
Sbjct: 459 GVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEA 518
Query: 376 LKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDG 435
EM N D Y+ + GLC++ + ALEL+ S E D++ ++ LI G
Sbjct: 519 SAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHG 578
Query: 436 LCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPD 495
LC +GKL+ A + ++ N+VTYN ++ G G ++A ++ M G++PD
Sbjct: 579 LCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPD 638
Query: 496 CVIFNTIMLGF 506
+ +NTIM G
Sbjct: 639 IISYNTIMKGL 649
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 135/479 (28%), Positives = 233/479 (48%), Gaps = 24/479 (5%)
Query: 34 IEKFLKERSKSSGQGDINLITPNEALCIFDYMLRMHPSPPPVSSFNILFGCLAKNKHYDT 93
I+ FLKE+ + A+ ++D +L P V + NI+ L+K D
Sbjct: 226 IDGFLKEKDHKT------------AMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDD 273
Query: 94 VLSLFKRLNSTGLFPDLYTHSILINC-----RIMEAAALFTKLRVFGCEPDVFTYNTLIN 148
L +++R+ DLYT+S LI+ + +A ++F +L DV TYNT++
Sbjct: 274 CLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLG 333
Query: 149 GLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFVDKAMELFLQMK 208
G CR G +L L+ M + N + V+YN +I G+ + G +D+A ++ M
Sbjct: 334 GFCRCGKIKESLELWRIMEHKNS-------VNIVSYNILIKGLLENGKIDEATMIWRLMP 386
Query: 209 DENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIVDELCKNGKME 268
+ + TY IH N+A + ++ G H +V ++ I+D LCK ++E
Sbjct: 387 AKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLE 446
Query: 269 EASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLI 328
EAS L+ M + GV N+ V N L+ G R+ A M NGC VVSY LI
Sbjct: 447 EASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILI 506
Query: 329 NGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVA 388
G CK EA ++ML G +P + TYS L GL +++ AL+L+ + + +
Sbjct: 507 CGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLE 566
Query: 389 ADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWEL 448
D ++N I GLC G + +A+ + + + ++++Y+ L++G K+G A +
Sbjct: 567 TDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVI 626
Query: 449 FQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFI 507
+ + ++GL P++++YN ++ GLC + A + F D G+ P +N ++ +
Sbjct: 627 WGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVV 685
Score = 189 bits (480), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 188/341 (55%), Gaps = 3/341 (0%)
Query: 177 CKPDTVTYNTIIDGVCKEGFVDKAMELFLQMKDE-NINPNVVTYNSLIHCFSHADDWNEA 235
CK D ++I K D+A+++F +M++ P + +YN+L++ F A W +
Sbjct: 74 CKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKV 133
Query: 236 KRLFIKMMDQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDG 295
+ LF GV PN+ T++V++ CK + E+A LD M + G P+ F Y+T+++
Sbjct: 134 ESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVIND 193
Query: 296 FCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLP-KGIRP 354
G+++ A ELF M G DV Y LI+G+ K K+ + A+ L+ ++L + P
Sbjct: 194 LAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYP 253
Query: 355 TVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELF 414
V T++ + GL + +V+ LK+++ M+ N+ D Y Y++ I GLC G V +A +F
Sbjct: 254 NVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVF 313
Query: 415 CAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCND 474
+ K +D+++Y+ ++ G C+ GK++ + EL++ + + N+V+YNI+I GL +
Sbjct: 314 NELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLEN 372
Query: 475 GQMDKAHDLFLDMEAKGVEPDCVIFNTIMLGFIRNNETSKS 515
G++D+A ++ M AKG D + + G N +K+
Sbjct: 373 GKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKA 413
Score = 89.4 bits (220), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 2/228 (0%)
Query: 281 GVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEA 340
G + VY+ ++ T VNH + + S C D ++I Y K ++A
Sbjct: 38 GYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQA 97
Query: 341 LNLYRKMLPK-GIRPTVVTYSTLFLGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFID 399
L+++++M G P + +Y+TL E Q LF + VA + YN I
Sbjct: 98 LDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIK 157
Query: 400 GLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLP 459
CK +A + ++ D+ SYS +I+ L K GKL+ A ELF +S G+ P
Sbjct: 158 MSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAP 217
Query: 460 NVVTYNIMIHGLCNDGQMDKAHDLFLD-MEAKGVEPDCVIFNTIMLGF 506
+V YNI+I G + A +L+ +E V P+ N ++ G
Sbjct: 218 DVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGL 265
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 219 bits (559), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 131/435 (30%), Positives = 227/435 (52%), Gaps = 12/435 (2%)
Query: 73 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTHSILINC-----RIMEAAAL 127
P + FN L + + ++ S F N + + D+Y+ ILI I ++ L
Sbjct: 127 PGSNCFNYLLTFVVGSSSFNQWWSFFNE-NKSKVVLDVYSFGILIKGCCEAGEIEKSFDL 185
Query: 128 FTKLRVFGCEPDVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTI 187
+L FG P+V Y TLI+G C+ G A +LF EM G+ G+V + TY +
Sbjct: 186 LIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM----GKLGLV--ANERTYTVL 239
Query: 188 IDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGV 247
I+G+ K G + E++ +M+++ + PN+ TYN +++ +A ++F +M ++GV
Sbjct: 240 INGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGV 299
Query: 248 HPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKE 307
N+VT++ ++ LC+ K+ EA++++D M G++PN YNTL+DGFC G++ A
Sbjct: 300 SCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALS 359
Query: 308 LFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLF 367
L ++S G +V+Y L++G+C+ + A + ++M +GI+P+ VTY+ L
Sbjct: 360 LCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFA 419
Query: 368 EVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDII 427
+E A++L M+ + D + Y+ I G C G + EA LF ++ E + +
Sbjct: 420 RSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEV 479
Query: 428 SYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDM 487
Y+ +I G CK G A +L + + L PNV +Y MI LC + + +A L M
Sbjct: 480 IYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKM 539
Query: 488 EAKGVEPDCVIFNTI 502
G++P I + I
Sbjct: 540 IDSGIDPSTSILSLI 554
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 200/379 (52%), Gaps = 6/379 (1%)
Query: 139 DVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPDTVTYNTIIDGVCKEGFVD 198
DV+++ LI G C G + +L E+ EFG P+ V Y T+IDG CK+G ++
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELT----EFGF--SPNVVIYTTLIDGCCKKGEIE 215
Query: 199 KAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMMDQGVHPNVVTFSVIV 258
KA +LF +M + N TY LI+ + ++ KM + GV PN+ T++ ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 259 DELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVNHAKELFVSMESNGCM 318
++LCK+G+ ++A ++ D M + GV N YNTL+ G C ++N A ++ M+S+G
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 319 HDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLFLGLFEVHQVEHALKL 378
++++Y TLI+G+C + +AL+L R + +G+ P++VTY+ L G A K+
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395
Query: 379 FDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYELDIISYSCLIDGLCK 438
EM+ + Y ID ++ + +A++L ++ D+ +YS LI G C
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455
Query: 439 IGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDLFLDMEAKGVEPDCVI 498
G++ A LF+S+ PN V YN MI G C +G +A L +ME K + P+
Sbjct: 456 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVAS 515
Query: 499 FNTIMLGFIRNNETSKSSR 517
+ ++ + ++ ++ R
Sbjct: 516 YRYMIEVLCKERKSKEAER 534
Score = 172 bits (437), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 207/425 (48%), Gaps = 14/425 (3%)
Query: 184 YNTIIDGVCKEGFVDKAMELFLQMKDENINPNVVTYNSLIHCFSHADDWNEAKRLFIKMM 243
Y II+ + ++ ++ F +M D P +N L+ + +N+ F +
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 244 DQGVHPNVVTFSVIVDELCKNGKMEEASRLLDLMIQIGVHPNTFVYNTLMDGFCLTGRVN 303
+ V +V +F +++ C+ G++E++ LL + + G PN +Y TL+DG C G +
Sbjct: 157 SK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 304 HAKELFVSMESNGCMHDVVSYTTLINGYCKTKNVEEALNLYRKMLPKGIRPTVVTYSTLF 363
AK+LF M G + + +YT LING K ++ +Y KM G+ P + TY+ +
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 364 LGLFEVHQVEHALKLFDEMQHNDVAADTYIYNTFIDGLCKNGFVLEALELFCAIGNSKYE 423
L + + + A ++FDEM+ V+ + YNT I GLC+ + EA ++ + +
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 424 LDIISYSCLIDGLCKIGKLETAWELFQSLSRVGLLPNVVTYNIMIHGLCNDGQMDKAHDL 483
++I+Y+ LIDG C +GKL A L + L GL P++VTYNI++ G C G A +
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395
Query: 484 FLDMEAKGVEPDCVIFNTIMLGFIRNNETSKSSRGKLMSQMSSCWSMCFQPKTLICSISI 543
+ME +G++P V + ++ F R++ K+ + +L + LI I
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455
Query: 544 -------------MLQKDMSPGDTMFSTALLMDPDCSCDLESLIHNTDLDQDELAYVITN 590
M++K+ P + +++T +L +L ++++ ELA + +
Sbjct: 456 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVAS 515
Query: 591 STWLL 595
+++
Sbjct: 516 YRYMI 520
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 219,151,792
Number of Sequences: 539616
Number of extensions: 9083168
Number of successful extensions: 35773
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 21502
Number of HSP's gapped (non-prelim): 3197
length of query: 598
length of database: 191,569,459
effective HSP length: 123
effective length of query: 475
effective length of database: 125,196,691
effective search space: 59468428225
effective search space used: 59468428225
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)