BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047934
(344 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SZL5|PP356_ARATH Pentatricopeptide repeat-containing protein At4g38150
OS=Arabidopsis thaliana GN=At4g38150 PE=2 SV=1
Length = 302
Score = 339 bits (869), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 176/292 (60%), Positives = 211/292 (72%), Gaps = 32/292 (10%)
Query: 53 QNPPEPIPDRPLRGERPFTNQNQNRRSFQPRFNNYQQQQRPQQQSFQSPNGPRPKSPDGV 112
QNPPEP+P+RPLRGER + N +R + +N + D
Sbjct: 43 QNPPEPLPNRPLRGER---SSNSHREPPARQAHNLGKS-------------------DTT 80
Query: 113 QSDENFLDQFKLAIDKKPGNPQQNESLGQRQEQKPNRNEPISEPPQEADEIFKKMKETGL 172
SD+ FL+QFKL ++ Q+ + EQ P EP+ PP+++DEIFKKMKE GL
Sbjct: 81 LSDDGFLEQFKLGVN-------QDSRETPKPEQYPQ--EPLP-PPEDSDEIFKKMKEGGL 130
Query: 173 IPNAVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFR 232
IPNAVAMLDGLCKDGL+QEAMKLFGLMR+KGTIPEVVIYTAVV+ FCKA K +DAKRIFR
Sbjct: 131 IPNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFR 190
Query: 233 KMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRER 292
KMQ+NGIAPNAFSY +L+QGLY CN L++AV +C EMLE+GHSPNV TFV LVD LCR +
Sbjct: 191 KMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVK 250
Query: 293 GVEKAQSVIATLKEKGFLVNDKAVREFLDKKAPFSSSVWEAIFGKKTLQKPF 344
GVE+AQS I TL +KGF VN KAV+EF+DK+APF S WEAIF KK +KPF
Sbjct: 251 GVEQAQSAIDTLNQKGFAVNVKAVKEFMDKRAPFPSLAWEAIFKKKPTEKPF 302
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 88/145 (60%), Gaps = 3/145 (2%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA E++ +M G+ P+ + +++DG CK+ + EA ++F LM KG P++V Y+ ++
Sbjct: 333 EAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILI 392
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
+ +CKA++ DD R+FR++ S G+ PN +YN L+ G + KL A E EM+ G
Sbjct: 393 NSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVP 452
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSV 300
P+V T+ L+DGLC + KA +
Sbjct: 453 PSVVTYGILLDGLCDNGELNKALEI 477
Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 84/152 (55%), Gaps = 3/152 (1%)
Query: 160 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A ++F+KM+E + + V ++D LCKDG +A+ LF M KG +VV Y++++
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
G C K+DD ++ R+M I P+ +++ LI K KL EA E EM+ G +P
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
+ T+ L+DG C+E + +A + + KG
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 85/157 (54%), Gaps = 3/157 (1%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
+A +F +M+ G+ + V +++ GLC DG + K+ M + IP+VV ++A++
Sbjct: 263 DALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 322
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
D F K K +AK ++ +M + GIAP+ +YN LI G K N L EA + M+ G
Sbjct: 323 DVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE 382
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVN 312
P++ T+ L++ C+ + V+ + + KG + N
Sbjct: 383 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPN 419
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 85/154 (55%), Gaps = 3/154 (1%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
EA+++F M G P+ V +++ CK + + M+LF + KG IP + Y +
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
V GFC++ K + AK +F++M S G+ P+ +Y +L+ GL +L +A+E +M ++
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
+ + + ++ G+C V+ A S+ +L +KG
Sbjct: 487 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG 520
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 80/149 (53%), Gaps = 3/149 (2%)
Query: 163 IFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFC 219
+F+++ GLIPN + ++ G C+ G + A +LF M +G P VV Y ++DG C
Sbjct: 407 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 466
Query: 220 KAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVT 279
+ + A IF KMQ + + YN++I G+ +K+++A + + G P+V
Sbjct: 467 DNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVV 526
Query: 280 TFVGLVDGLCRERGVEKAQSVIATLKEKG 308
T+ ++ GLC++ + +A + +KE G
Sbjct: 527 TYNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 86/165 (52%), Gaps = 3/165 (1%)
Query: 160 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A E+F++M G+ P+ V +LDGLC +G + +A+++F M++ + IY ++
Sbjct: 439 AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIH 498
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
G C A K DDA +F + G+ P+ +YN++I GL K L EA +M E G +P
Sbjct: 499 GMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTP 558
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVREFLD 321
+ T+ L+ G+ + +I +K GF + ++ +D
Sbjct: 559 DDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID 603
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 3/155 (1%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
EA + +M E G P+ V +L+ LCK G A+ LF M E+ VV Y+ V
Sbjct: 192 SEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIV 251
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+D CK FDDA +F +M+ GI + +Y+ LI GL K ++ + EM+
Sbjct: 252 IDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI 311
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
P+V TF L+D +E + +A+ + + +G
Sbjct: 312 IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 75/139 (53%), Gaps = 7/139 (5%)
Query: 159 EADEIFKKMKETGL-----IPNAVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTA 213
+A EIF+KM+++ + I N + + G+C + +A LF + +KG P+VV Y
Sbjct: 473 KALEIFEKMQKSRMTLGIGIYNII--IHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 530
Query: 214 VVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAG 273
++ G CK +A +FRKM+ +G P+ F+YN+LI+ + L +VE EM G
Sbjct: 531 MIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCG 590
Query: 274 HSPNVTTFVGLVDGLCRER 292
S + +T ++D L R
Sbjct: 591 FSADSSTIKMVIDMLSDRR 609
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 3/137 (2%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
EA + +M E P+ V +++GLC G + EA+ L M E G P+ V Y V
Sbjct: 157 SEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPV 216
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
++ CK+ A +FRKM+ I + Y+++I L K ++A+ EM G
Sbjct: 217 LNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGI 276
Query: 275 SPNVTTFVGLVDGLCRE 291
+V T+ L+ GLC +
Sbjct: 277 KADVVTYSSLIGGLCND 293
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 63/132 (47%)
Query: 178 AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSN 237
+++G C +G + EA+ L M E P++V + +++G C + +A + +M
Sbjct: 145 TLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEY 204
Query: 238 GIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKA 297
G P+ +Y ++ L K A++ +M E +V + ++D LC++ + A
Sbjct: 205 GFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDA 264
Query: 298 QSVIATLKEKGF 309
S+ ++ KG
Sbjct: 265 LSLFNEMEMKGI 276
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 80/176 (45%), Gaps = 27/176 (15%)
Query: 149 RNEPISEPPQEADEIFKKMKETGLIP---------NAVA------MLDGLCKDGLIQEAM 193
RN + +A ++F+ M ++ +P +AVA ++ G CK M
Sbjct: 43 RNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCK------GM 96
Query: 194 KLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGL 253
+L G+ + T+ T +++ +C+ +K A + + G P+ +++ L+ G
Sbjct: 97 ELNGIEHDMYTM------TIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGF 150
Query: 254 YKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
++ EAV M+E P++ T L++GLC + V +A +I + E GF
Sbjct: 151 CLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGF 206
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 70/155 (45%), Gaps = 3/155 (1%)
Query: 179 MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNG 238
M++ C+ + A + G + G P+ + ++ +V+GFC + +A + +M
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 239 IAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQ 298
P+ + + LI GL ++ EA+ M+E G P+ T+ +++ LC+ A
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 299 SVIATLKE---KGFLVNDKAVREFLDKKAPFSSSV 330
+ ++E K +V V + L K F ++
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDAL 265
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 89/154 (57%), Gaps = 3/154 (1%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA+E F +M G++P+ V ++DG CK G I+ A K F M + P+V+ YTA++
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
GFC+ +A ++F +M G+ P++ ++ LI G K +++A M++AG S
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
PNV T+ L+DGLC+E ++ A ++ + + G
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Score = 102 bits (253), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 86/154 (55%), Gaps = 3/154 (1%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA ++F +M GL P++V +++G CK G +++A ++ M + G P VV YT ++
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
DG CK D A + +M G+ PN F+YN ++ GL K +EEAV+ E AG +
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 523
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
+ T+ L+D C+ ++KAQ ++ + KG
Sbjct: 524 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 83/155 (53%), Gaps = 3/155 (1%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+ A + F +M + P+ + A++ G C+ G + EA KLF M KG P+ V +T +
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
++G+CKA DA R+ M G +PN +Y LI GL K L+ A E EM + G
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
PN+ T+ +V+GLC+ +E+A ++ + G
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 3/152 (1%)
Query: 160 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A+E+ +M + GL PN ++++GLCK G I+EA+KL G G + V YT ++D
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
+CK+ + D A+ I ++M G+ P ++N+L+ G LE+ + ML G +P
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
N TTF LV C ++ A ++ + +G
Sbjct: 595 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Score = 85.1 bits (209), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 77/140 (55%), Gaps = 4/140 (2%)
Query: 163 IFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFC 219
+F++ E G+ N + ++ +C+ G I+EA L LM KG P+V+ Y+ VV+G+C
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 220 KAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVT 279
+ + D ++ M+ G+ PN++ Y +I L + KL EA E EM+ G P+
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 280 TFVGLVDGLCRERGVEKAQS 299
+ L+DG C+ RG +A S
Sbjct: 353 VYTTLIDGFCK-RGDIRAAS 371
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
++A + M + G PN V ++DGLCK+G + A +L M + G P + Y ++
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
V+G CK+ ++A ++ + ++ G+ + +Y L+ K ++++A E EML G
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
P + TF L++G C +E + ++ + KG
Sbjct: 558 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 3/155 (1%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+EA + M+ G P+ ++ +++G C+ G + + KL +M+ KG P IY ++
Sbjct: 263 KEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSI 322
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+ C+ K +A+ F +M GI P+ Y LI G K + A ++ EM
Sbjct: 323 IGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI 382
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
+P+V T+ ++ G C+ + +A + + KG
Sbjct: 383 TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 417
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 187 GLIQEAMKLFGLMREKGTIPEVV---IYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNA 243
GL++EA ++F M G + V +Y + C K A +FR+ G+ N
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDC--YKTATAIIVFREFPEVGVCWNV 246
Query: 244 FSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIAT 303
SYN++I + + +++EA + M G++P+V ++ +V+G CR ++K +I
Sbjct: 247 ASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 306
Query: 304 LKEKGF 309
+K KG
Sbjct: 307 MKRKGL 312
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 67/161 (41%), Gaps = 38/161 (23%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIY---- 211
+A EI K+M GL P V +++G C G++++ KL M KG P +
Sbjct: 544 KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Query: 212 ------------TAV-------------------VDGFCKAQKFDDAKRIFRKMQSNGIA 240
TA+ V G CKA+ +A +F++M+ G +
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 663
Query: 241 PNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTF 281
+ +Y++LI+G K K EA E +M G + + F
Sbjct: 664 VSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 72/168 (42%), Gaps = 4/168 (2%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGL-IQEAMKLFGLMREKGTIPEVVIYTA 213
+EA +F+KM GL+ + + L L KD A+ +F E G V Y
Sbjct: 192 REARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNI 251
Query: 214 VVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAG 273
V+ C+ + +A + M+ G P+ SY+ ++ G + +L++ + M G
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 311
Query: 274 HSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVREFLD 321
PN + ++ LCR + +A+ + + +G L + +D
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID 359
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+ A I+K M G+ P+ ++ G CK ++EA LF M+ KG V Y+ +
Sbjct: 613 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 672
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLE 271
+ GF K +KF +A+ +F +M+ G+A + ++ YK + + V+ E++E
Sbjct: 673 IKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 93/152 (61%), Gaps = 3/152 (1%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+EAD++ K+M + G+ PN + +++DG CK+ ++EA+++ LM KG P+++ + +
Sbjct: 350 READQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNIL 409
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
++G+CKA + DD +FR+M G+ N +YN L+QG + KLE A + EM+
Sbjct: 410 INGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRV 469
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKE 306
P++ ++ L+DGLC +EKA + +++
Sbjct: 470 RPDIVSYKILLDGLCDNGELEKALEIFGKIEK 501
Score = 105 bits (262), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 88/152 (57%), Gaps = 3/152 (1%)
Query: 160 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A E+ +KM+E + +AV ++DGLCKDG + A LF M KG +++ Y ++
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
GFC A ++DD ++ R M I+PN ++++LI K KL EA + EM++ G +P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
N T+ L+DG C+E +E+A ++ + KG
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 78/142 (54%), Gaps = 3/142 (2%)
Query: 162 EIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGF 218
++ + M + + PN V ++D K+G ++EA +L M ++G P + Y +++DGF
Sbjct: 319 KLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGF 378
Query: 219 CKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNV 278
CK + ++A ++ M S G P+ ++N+LI G K N++++ +E EM G N
Sbjct: 379 CKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANT 438
Query: 279 TTFVGLVDGLCRERGVEKAQSV 300
T+ LV G C+ +E A+ +
Sbjct: 439 VTYNTLVQGFCQSGKLEVAKKL 460
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 85/159 (53%), Gaps = 3/159 (1%)
Query: 154 SEPPQEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVI 210
S + A ++F++M + P+ V+ +LDGLC +G +++A+++FG + + ++ I
Sbjct: 451 SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510
Query: 211 YTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEML 270
Y ++ G C A K DDA +F + G+ +A +YN++I L + + L +A +M
Sbjct: 511 YMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMT 570
Query: 271 EAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
E GH+P+ T+ L+ + A +I +K GF
Sbjct: 571 EEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGF 609
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%), Gaps = 38/202 (18%)
Query: 158 QEADEIFKKMKETGLIPNAVAM---LDGLCKDGLIQEAMKLFGLMREKGTIP-------- 206
EA E+ +M E G P + + ++GLC +G + +A+ L M E G P
Sbjct: 175 SEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPV 234
Query: 207 ---------------------------EVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGI 239
+ V Y+ ++DG CK D+A +F +M+ G
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 294
Query: 240 APNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQS 299
+ +YN LI G + ++ + +M++ SPNV TF L+D +E + +A
Sbjct: 295 KADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQ 354
Query: 300 VIATLKEKGFLVNDKAVREFLD 321
++ + ++G N +D
Sbjct: 355 LLKEMMQRGIAPNTITYNSLID 376
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 3/156 (1%)
Query: 157 PQEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTA 213
+A ++F+ M ++ +P + + + K + + L M KG + +
Sbjct: 69 ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128
Query: 214 VVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAG 273
+++ FC+ +K A K+ G P+ +N L+ GL ++ EA+E M+E G
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188
Query: 274 HSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
H P + T LV+GLC V A +I + E GF
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGF 224
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 77/150 (51%), Gaps = 3/150 (2%)
Query: 162 EIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGF 218
E+F++M G+I N V ++ G C+ G ++ A KLF M + P++V Y ++DG
Sbjct: 424 ELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGL 483
Query: 219 CKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNV 278
C + + A IF K++ + + + Y ++I G+ +K+++A + + G +
Sbjct: 484 CDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDA 543
Query: 279 TTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
+ ++ LCR+ + KA + + E+G
Sbjct: 544 RAYNIMISELCRKDSLSKADILFRKMTEEG 573
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 3/147 (2%)
Query: 166 KMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQ 222
K+ + G P+ V +L+GLC + + EA++L M E G P ++ +V+G C
Sbjct: 148 KIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNG 207
Query: 223 KFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFV 282
K DA + +M G PN +Y ++ + K + A+E +M E + +
Sbjct: 208 KVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267
Query: 283 GLVDGLCRERGVEKAQSVIATLKEKGF 309
++DGLC++ ++ A ++ ++ KGF
Sbjct: 268 IIIDGLCKDGSLDNAFNLFNEMEIKGF 294
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 68/146 (46%), Gaps = 3/146 (2%)
Query: 165 KKMKETGL---IPNAVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKA 221
K+M+ G+ I M++ C+ + A G + + G P+ VI+ +++G C
Sbjct: 112 KQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLE 171
Query: 222 QKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTF 281
+ +A + +M G P + N L+ GL K+ +AV M+E G PN T+
Sbjct: 172 CRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTY 231
Query: 282 VGLVDGLCRERGVEKAQSVIATLKEK 307
+++ +C+ A ++ ++E+
Sbjct: 232 GPVLNVMCKSGQTALAMELLRKMEER 257
Score = 40.4 bits (93), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 50/121 (41%), Gaps = 35/121 (28%)
Query: 223 KFDDAKRIFR-----------------------------------KMQSNGIAPNAFSYN 247
K DDA +FR +M+S GIA + ++ +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 248 LLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEK 307
++I +C KL A ++++ G+ P+ F L++GLC E V +A ++ + E
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 308 G 308
G
Sbjct: 188 G 188
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 90/153 (58%), Gaps = 3/153 (1%)
Query: 160 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
AD+ K+M+E G++PN V +++ CK G + EA + M ++G + + YT +++
Sbjct: 541 ADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMN 600
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
G K K DDA+ IFR+M+ GIAP+ FSY +LI G K +++A EM+E G +P
Sbjct: 601 GLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP 660
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
NV + L+ G CR +EKA+ ++ + KG
Sbjct: 661 NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL 693
Score = 98.2 bits (243), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 97/187 (51%), Gaps = 15/187 (8%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
+A+EIF++M+ G+ P+ + +++G K G +Q+A +F M E+G P V+IY ++
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
GFC++ + + AK + +M G+ PNA +Y +I G K L EA EM G
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVREFLDKKAPFSSSV-WEAI 334
P+ + LVDG CR VE+A ++ T N K APF++ + W
Sbjct: 730 PDSFVYTTLVDGCCRLNDVERAITIFGT--------NKKGCAS---STAPFNALINWVFK 778
Query: 335 FGKKTLQ 341
FGK L+
Sbjct: 779 FGKTELK 785
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 70/135 (51%)
Query: 178 AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSN 237
++ G+C G + A + M G P VVIYT ++ F + +F DA R+ ++M+
Sbjct: 422 TVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ 481
Query: 238 GIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKA 297
GIAP+ F YN LI GL K +++EA + +EM+E G PN T+ + G A
Sbjct: 482 GIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASA 541
Query: 298 QSVIATLKEKGFLVN 312
+ ++E G L N
Sbjct: 542 DKYVKEMRECGVLPN 556
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 82/155 (52%), Gaps = 3/155 (1%)
Query: 159 EADEIFKKMKETGLIPNA---VAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA ++ M + G++ +A +++GL K+ + +A ++F MR KG P+V Y ++
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
+GF K A IF +M G+ PN YN+L+ G + ++E+A E EM G
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFL 310
PN T+ ++DG C+ + +A + +K KG +
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 84/159 (52%), Gaps = 3/159 (1%)
Query: 160 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A I K+M +G PN V ++ ++ +AM++ M+E+G P++ Y +++
Sbjct: 436 AYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
G KA++ D+A+ +M NG+ PNAF+Y I G + ++ A +Y EM E G P
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLP 555
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKA 315
N GL++ C++ V +A S ++ ++G L + K
Sbjct: 556 NKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKT 594
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 3/154 (1%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA +M E GL PNA A + G + A K MRE G +P V+ T ++
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
+ +CK K +A +R M GI +A +Y +L+ GL+K +K+++A E EM G +
Sbjct: 565 NEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIA 624
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
P+V ++ L++G + ++KA S+ + E+G
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 77/154 (50%), Gaps = 7/154 (4%)
Query: 166 KMKET----GLIP---NAVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGF 218
K+KE+ GL+P ++DGLCK +++A L M G + Y+ ++DG
Sbjct: 263 KLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGL 322
Query: 219 CKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNV 278
K + D AK + +M S+GI + Y+ I + K +E+A M+ +G P
Sbjct: 323 LKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQA 382
Query: 279 TTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVN 312
+ L++G CRE+ V + ++ +K++ +++
Sbjct: 383 QAYASLIEGYCREKNVRQGYELLVEMKKRNIVIS 416
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 63/127 (49%)
Query: 183 LCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPN 242
+ K+G++++A LF M G IP+ Y ++++G+C+ + + +M+ I +
Sbjct: 357 MSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVIS 416
Query: 243 AFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIA 302
++Y +++G+ L+ A EM+ +G PNV + L+ + A V+
Sbjct: 417 PYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476
Query: 303 TLKEKGF 309
+KE+G
Sbjct: 477 EMKEQGI 483
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 83/168 (49%), Gaps = 8/168 (4%)
Query: 174 PNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRI 230
PN V M+D LCK+G ++ A +LF M+ +P V+ YT++++G+ K + + +
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 231 FRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEM-----LEAGHSPNVTTFVGLV 285
F + + GI P+ Y+++I K +A+ +M ++ G +++T L+
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 286 DGLCRERGVEKAQSVIATLKEKGFLVNDKAVREFLDKKAPFSSSVWEA 333
G + +E A+ V+ + ++ + V E +++ S+ EA
Sbjct: 923 SGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQRVEA 970
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 101/261 (38%), Gaps = 66/261 (25%)
Query: 110 DGVQSDENFLDQFK-LAIDK-KPGNPQQNESLGQRQEQKPNRNEPISEPPQE---ADEIF 164
D + E LD F LA+D G+ ++ S+ +R + RN P++E + F
Sbjct: 88 DSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIE---RNWPVAEVWSSIVRCSQEF 144
Query: 165 KKMKETGLIPNAVAMLDGLCKDGLIQEAMKLF----GL---------------------- 198
+ G++ + DG G I+EA+ +F GL
Sbjct: 145 VGKSDDGVLFGI--LFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRL 202
Query: 199 ---------MREKGTIPEVVIYTAVVDGFCKA---------------------QKFDDAK 228
M E+ + +V Y ++ C+A D A
Sbjct: 203 DLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGAL 262
Query: 229 RIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGL 288
++ M G+ P ++Y++LI GL K +LE+A +EM G S + T+ L+DGL
Sbjct: 263 KLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGL 322
Query: 289 CRERGVEKAQSVIATLKEKGF 309
+ R + A+ ++ + G
Sbjct: 323 LKGRNADAAKGLVHEMVSHGI 343
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 88/152 (57%), Gaps = 3/152 (1%)
Query: 160 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A E+ +KM+E + +AV ++DGLCKDG + A LF M KG +++IYT ++
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
GFC A ++DD ++ R M I P+ +++ LI K KL EA E EM++ G SP
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
+ T+ L+DG C+E ++KA ++ + KG
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 83/146 (56%), Gaps = 3/146 (2%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+EA+E+ K+M + G+ P+ V +++DG CK+ + +A + LM KG P + + +
Sbjct: 334 REAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNIL 393
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
++G+CKA DD +FRKM G+ + +YN LIQG + KLE A E EM+
Sbjct: 394 INGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSV 300
P++ ++ L+DGLC EKA +
Sbjct: 454 RPDIVSYKILLDGLCDNGEPEKALEI 479
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 89/167 (53%), Gaps = 3/167 (1%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+ A E+F++M + P+ V+ +LDGLC +G ++A+++F + + ++ IY +
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+ G C A K DDA +F + G+ P+ +YN++I GL K L EA +M E GH
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVREFLD 321
SPN T+ L+ E K+ +I +K GF V+ V+ +D
Sbjct: 559 SPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVD 605
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
+ ++ + M + + P+ VA ++D K+G ++EA +L M ++G P+ V YT+++
Sbjct: 300 DGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLI 359
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
DGFCK + D A + M S G PN ++N+LI G K N +++ +E +M G
Sbjct: 360 DGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVV 419
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSV 300
+ T+ L+ G C +E A+ +
Sbjct: 420 ADTVTYNTLIQGFCELGKLEVAKEL 444
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 80/153 (52%), Gaps = 3/153 (1%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
+A+ + M G PN +++G CK LI + ++LF M +G + + V Y ++
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
GFC+ K + AK +F++M S + P+ SY +L+ GL + E+A+E ++ ++
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
++ + ++ G+C V+ A + +L KG
Sbjct: 490 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 76/147 (51%), Gaps = 3/147 (2%)
Query: 166 KMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQ 222
K+ + G P+ V +++GLC +G + EA++L M E G P ++ A+V+G C
Sbjct: 132 KIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNG 191
Query: 223 KFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFV 282
K DA + +M G PN +Y +++ + K + A+E +M E + +
Sbjct: 192 KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 251
Query: 283 GLVDGLCRERGVEKAQSVIATLKEKGF 309
++DGLC++ ++ A ++ ++ KGF
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEMEIKGF 278
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
EA E+ +M E G P + A+++GLC +G + +A+ L M E G P V Y V
Sbjct: 159 SEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPV 218
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+ CK+ + A + RKM+ I +A Y+++I GL K L+ A EM G
Sbjct: 219 LKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 278
Query: 275 SPNVTTFVGLVDGLC 289
++ + L+ G C
Sbjct: 279 KADIIIYTTLIRGFC 293
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 74/143 (51%), Gaps = 19/143 (13%)
Query: 157 PQEADEIFKKMKETGL-----IPNAVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIY 211
P++A EIF+K++++ + I N + + G+C + +A LF + KG P+V Y
Sbjct: 473 PEKALEIFEKIEKSKMELDIGIYNII--IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTY 530
Query: 212 TAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQG------LYKCNKLEEAVEY 265
++ G CK +A +FRKM+ +G +PN +YN+LI+ K KL E ++
Sbjct: 531 NIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKR 590
Query: 266 CIEMLEAGHSPNVTTFVGLVDGL 288
C G S + +T +VD L
Sbjct: 591 C------GFSVDASTVKMVVDML 607
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%)
Query: 199 MREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNK 258
M KG + + +++ C+ +K A K+ G P+ +++ LI GL +
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 259 LEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
+ EA+E M+E GH P + T LV+GLC V A +I + E GF
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGF 208
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 62/118 (52%)
Query: 191 EAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLI 250
+A+ LF M P ++ ++ + + +++D + ++M+ GIA N ++ +++I
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 251 QGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
+C KL A ++++ G+ P+ TF L++GLC E V +A ++ + E G
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 69/149 (46%), Gaps = 3/149 (2%)
Query: 162 EIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGF 218
++ K+M+ G+ N M++ C+ + A G + + G P+ V ++ +++G
Sbjct: 93 DLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGL 152
Query: 219 CKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNV 278
C + +A + +M G P + N L+ GL K+ +AV M+E G PN
Sbjct: 153 CLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNE 212
Query: 279 TTFVGLVDGLCRERGVEKAQSVIATLKEK 307
T+ ++ +C+ A ++ ++E+
Sbjct: 213 VTYGPVLKVMCKSGQTALAMELLRKMEER 241
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 89/150 (59%), Gaps = 3/150 (2%)
Query: 162 EIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGF 218
E+++KM+E G+ PN +++ LCKDG ++A ++F MRE+G +V Y ++ G
Sbjct: 254 EMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGL 313
Query: 219 CKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNV 278
C+ K ++A ++ +M+S+GI PN +YN LI G KL +A+ C ++ G SP++
Sbjct: 314 CREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSL 373
Query: 279 TTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
T+ LV G CR+ A ++ ++E+G
Sbjct: 374 VTYNILVSGFCRKGDTSGAAKMVKEMEERG 403
Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 88/155 (56%), Gaps = 3/155 (1%)
Query: 158 QEADEIFKKMKETGLIPN---AVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
++A ++F +M + GL+ N +++GL K+G+ ++ +++ M+E G P + Y V
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCV 274
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
++ CK + DA ++F +M+ G++ N +YN LI GL + KL EA + +M G
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGI 334
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
+PN+ T+ L+DG C + KA S+ LK +G
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGL 369
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 157 PQEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTA 213
++A ++F +M+E G+ N V ++ GLC++ + EA K+ M+ G P ++ Y
Sbjct: 284 TKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNT 343
Query: 214 VVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAG 273
++DGFC K A + R ++S G++P+ +YN+L+ G + A + EM E G
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG 403
Query: 274 HSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFL 310
P+ T+ L+D R +EKA + +++E G +
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLV 440
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 84/152 (55%), Gaps = 3/152 (1%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA+++ +MK G+ PN + ++DG C G + +A+ L ++ +G P +V Y +V
Sbjct: 321 EANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILV 380
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
GFC+ A ++ ++M+ GI P+ +Y +LI + + +E+A++ + M E G
Sbjct: 381 SGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLV 440
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEK 307
P+V T+ L+ G C + + +A + ++ EK
Sbjct: 441 PDVHTYSVLIHGFCIKGQMNEASRLFKSMVEK 472
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 83/154 (53%), Gaps = 3/154 (1%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+++ ++ ++ E G PN V ++DG CK G I++A LF M + G + YT +
Sbjct: 180 EKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVL 239
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
++G K ++ KMQ +G+ PN ++YN ++ L K + ++A + EM E G
Sbjct: 240 INGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGV 299
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
S N+ T+ L+ GLCRE + +A V+ +K G
Sbjct: 300 SCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDG 333
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 84/152 (55%), Gaps = 3/152 (1%)
Query: 160 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A ++ K+M+E G+ P+ V ++D + +++A++L M E G +P+V Y+ ++
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIH 451
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
GFC + ++A R+F+ M PN YN +I G K A++ EM E +P
Sbjct: 452 GFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAP 511
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
NV ++ +++ LC+ER ++A+ ++ + + G
Sbjct: 512 NVASYRYMIEVLCKERKSKEAERLVEKMIDSG 543
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 3/166 (1%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
+A + + +K GL P+ V ++ G C+ G A K+ M E+G P V YT ++
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILI 415
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
D F ++ + A ++ M+ G+ P+ +Y++LI G ++ EA M+E
Sbjct: 416 DTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCE 475
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVREFLD 321
PN + ++ G C+E +A ++ ++EK N + R ++
Sbjct: 476 PNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIE 521
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 74/136 (54%), Gaps = 4/136 (2%)
Query: 154 SEPPQEADEIFKKMKETGLIPNA---VAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVI 210
S+ ++A ++ M+E GL+P+ ++ G C G + EA +LF M EK P VI
Sbjct: 421 SDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVI 480
Query: 211 YTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEML 270
Y ++ G+CK A ++ ++M+ +APN SY +I+ L K K +EA +M+
Sbjct: 481 YNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMI 540
Query: 271 EAGHSPNVTTFVGLVD 286
++G P+ T+ + L+
Sbjct: 541 DSGIDPS-TSILSLIS 555
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 192 AMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQ 251
++ F M + G +P + ++ + F+ F + +S + + +S+ +LI+
Sbjct: 113 SISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSK-VVLDVYSFGILIK 171
Query: 252 GLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLV 311
G + ++E++ + IE+ E G SPNV + L+DG C++ +EKA+ + + + G +
Sbjct: 172 GCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVA 231
Query: 312 NDKAVREFLD 321
N++ ++
Sbjct: 232 NERTYTVLIN 241
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 204 TIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAV 263
+ +V + ++ G C+A + + + + ++ G +PN Y LI G K ++E+A
Sbjct: 159 VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAK 218
Query: 264 EYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEK 296
+ EM + G N T+ L++GL + GV+K
Sbjct: 219 DLFFEMGKLGLVANERTYTVLINGLFK-NGVKK 250
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 105 bits (262), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 88/153 (57%), Gaps = 3/153 (1%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA+ + K+M + G+ P+ + ++DGLCK G++ +A + GLM+ G P+ V Y ++
Sbjct: 344 EAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLL 403
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
G+C K D AK + ++M N PNA++ N+L+ L+K ++ EA E +M E G+
Sbjct: 404 HGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYG 463
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
+ T +VDGLC ++KA ++ ++ G
Sbjct: 464 LDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 86/157 (54%), Gaps = 7/157 (4%)
Query: 159 EADEIFKKMKETGLIPNAVAM---LDGLCKDGLIQEAMKLFGLMREKGTI----PEVVIY 211
+++++ +KM+E GL+P+ V + LCK+G + +A ++F M + P + Y
Sbjct: 235 DSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITY 294
Query: 212 TAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLE 271
++ GFCK +DAK +F ++ N + SYN+ +QGL + K EA +M +
Sbjct: 295 NLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTD 354
Query: 272 AGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
G P++ ++ L+DGLC+ + A++++ +K G
Sbjct: 355 KGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNG 391
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 76/150 (50%), Gaps = 7/150 (4%)
Query: 159 EADEIFKKMKETGLI----PNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIY 211
+A IF M+ + PN++ ML G CK GL+++A LF +RE + + Y
Sbjct: 270 DASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSY 329
Query: 212 TAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLE 271
+ G + KF +A+ + ++M GI P+ +SYN+L+ GL K L +A M
Sbjct: 330 NIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKR 389
Query: 272 AGHSPNVTTFVGLVDGLCRERGVEKAQSVI 301
G P+ T+ L+ G C V+ A+S++
Sbjct: 390 NGVCPDAVTYGCLLHGYCSVGKVDAAKSLL 419
Score = 71.6 bits (174), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%)
Query: 180 LDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGI 239
L GL + G EA + M +KG P + Y ++DG CK DAK I M+ NG+
Sbjct: 333 LQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGV 392
Query: 240 APNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQS 299
P+A +Y L+ G K++ A EM+ PN T L+ L + + +A+
Sbjct: 393 CPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEE 452
Query: 300 VIATLKEKGF 309
++ + EKG+
Sbjct: 453 LLRKMNEKGY 462
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 167 MKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQK 223
+ E +P+ + +L+GLCK G EA LF M + P+ V Y + FCK K
Sbjct: 515 LIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGK 574
Query: 224 FDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVG 283
A R+ + M+ G + +YN LI GL N++ E EM E G SPN+ T+
Sbjct: 575 ISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNT 634
Query: 284 LVDGLCRERGVEKAQSVIATLKEK 307
+ LC VE A +++ + +K
Sbjct: 635 AIQYLCEGEKVEDATNLLDEMMQK 658
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 73/148 (49%), Gaps = 3/148 (2%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA +F +M L P++VA + CK G I A ++ M +KG + Y +++
Sbjct: 542 EAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLI 601
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
G + + + +M+ GI+PN +YN IQ L + K+E+A EM++ +
Sbjct: 602 LGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIA 661
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIAT 303
PNV +F L++ C+ + AQ V T
Sbjct: 662 PNVFSFKYLIEAFCKVPDFDMAQEVFET 689
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 3/151 (1%)
Query: 163 IFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFC 219
++K M G+ P ++ LC + A +LF M EKG P + +V G+C
Sbjct: 134 LYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYC 193
Query: 220 KAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVT 279
KA D + M+S G+ PN YN ++ + + +++ + +M E G P++
Sbjct: 194 KAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIV 253
Query: 280 TFVGLVDGLCRERGVEKAQSVIATLKEKGFL 310
TF + LC+E V A + + ++ +L
Sbjct: 254 TFNSRISALCKEGKVLDASRIFSDMELDEYL 284
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 73/175 (41%), Gaps = 26/175 (14%)
Query: 160 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A + ++M +PNA +L L K G I EA +L M EKG + V +VD
Sbjct: 415 AKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVD 474
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIA-----------------------PNAFSYNLLIQGL 253
G C + + D A I + M+ +G A P+ +Y+ L+ GL
Sbjct: 475 GLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGL 534
Query: 254 YKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
K + EA EM+ P+ + + C++ + A V+ +++KG
Sbjct: 535 CKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKG 589
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 75/166 (45%), Gaps = 4/166 (2%)
Query: 159 EADEIFKKMKETGLIPNAVAM---LDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
E + +MKE G+ PN + LC+ +++A L M +K P V + ++
Sbjct: 612 EIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLI 671
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
+ FCK FD A+ +F S Y+L+ L +L +A E +L+ G
Sbjct: 672 EAFCKVPDFDMAQEVFETAVSICGQKEGL-YSLMFNELLAAGQLLKATELLEAVLDRGFE 730
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVREFLD 321
+ LV+ LC++ +E A ++ + ++G+ + A+ +D
Sbjct: 731 LGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVID 776
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 55/107 (51%)
Query: 206 PEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEY 265
P V +Y +++ K ++ + +++ M GIAP +++NLLI+ L + ++ A E
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 266 CIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVN 312
EM E G PN TF LV G C+ +K ++ ++ G L N
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPN 216
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 62/132 (46%)
Query: 179 MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNG 238
+L+ K+ ++ L+ M G P+ + ++ C + D A+ +F +M G
Sbjct: 118 LLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKG 177
Query: 239 IAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQ 298
PN F++ +L++G K ++ +E M G PN + +V CRE + ++
Sbjct: 178 CKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSE 237
Query: 299 SVIATLKEKGFL 310
++ ++E+G +
Sbjct: 238 KMVEKMREEGLV 249
Score = 37.0 bits (84), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 213 AVVDGFCKAQKFDDAKRIFRKMQSN--GIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEML 270
+VV F K+ D A F+ ++S P+ + YNLL++ K ++E +M+
Sbjct: 80 SVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMV 139
Query: 271 EAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
G +P TF L+ LC V+ A+ + + EKG
Sbjct: 140 LCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKG 177
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 105 bits (261), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 88/151 (58%), Gaps = 3/151 (1%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+EA+++F+ MK+ G++PN AM+DG CK G +++A L+ + +P VV++ +
Sbjct: 251 EEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTL 310
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
VDGFCKA++ A+ +F M G+ PN + YN LI G K + EAV EM
Sbjct: 311 VDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNL 370
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLK 305
SP+V T+ L++GLC E V +A + +K
Sbjct: 371 SPDVFTYTILINGLCIEDQVAEANRLFQKMK 401
Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 3/154 (1%)
Query: 160 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A +F M + G+ PN ++ G CK G + EA+ L M P+V YT +++
Sbjct: 323 ARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILIN 382
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
G C + +A R+F+KM++ I P++ +YN LI G K +E+A++ C EM +G P
Sbjct: 383 GLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEP 442
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFL 310
N+ TF L+DG C R ++ A + + KG +
Sbjct: 443 NIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIV 476
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 78/142 (54%), Gaps = 3/142 (2%)
Query: 153 ISEPPQEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVV 209
I + EA+ +F+KMK + P++ +++ G CK+ +++A+ L M G P ++
Sbjct: 386 IEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNII 445
Query: 210 IYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEM 269
++ ++DG+C + A ++ +M GI P+ +Y LI +K ++EA+ +M
Sbjct: 446 TFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDM 505
Query: 270 LEAGHSPNVTTFVGLVDGLCRE 291
LEAG PN TF LVDG +E
Sbjct: 506 LEAGIHPNDHTFACLVDGFWKE 527
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 3/148 (2%)
Query: 164 FKKMKETGLIPNA---VAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCK 220
++ M GL+P+ + K GL + KL M G P V IYT + C+
Sbjct: 187 YQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCR 246
Query: 221 AQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTT 280
K ++A+++F M+ +G+ PN ++Y+ +I G K + +A E+L A PNV
Sbjct: 247 DNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVV 306
Query: 281 FVGLVDGLCRERGVEKAQSVIATLKEKG 308
F LVDG C+ R + A+S+ + + G
Sbjct: 307 FGTLVDGFCKARELVTARSLFVHMVKFG 334
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
++A ++ +M +G+ PN + ++DG C I+ AM L+ M KG +P+VV YTA+
Sbjct: 426 EQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTAL 485
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+D K +A R++ M GI PN ++ L+ G +K +L A+++ E +
Sbjct: 486 IDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRS 545
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
N F L++GLC+ + +A + ++ G
Sbjct: 546 CWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCG 579
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 81/166 (48%), Gaps = 3/166 (1%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA + +M+ L P+ +++GLC + + EA +LF M+ + P Y +++
Sbjct: 357 EAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLI 416
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
G+CK + A + +M ++G+ PN +++ LI G ++ A+ EM G
Sbjct: 417 HGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIV 476
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVREFLD 321
P+V T+ L+D +E +++A + + + E G ND +D
Sbjct: 477 PDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVD 522
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 72/143 (50%)
Query: 158 QEADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDG 217
+EA + ++MK + +++L+GL + + LM +G +P+V IY +
Sbjct: 149 EEALWVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQC 208
Query: 218 FCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPN 277
K + +++ +M S GI PN + Y + I L + NK+EEA + M + G PN
Sbjct: 209 CFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPN 268
Query: 278 VTTFVGLVDGLCRERGVEKAQSV 300
+ T+ ++DG C+ V +A +
Sbjct: 269 LYTYSAMIDGYCKTGNVRQAYGL 291
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 76/158 (48%), Gaps = 3/158 (1%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+ A ++ +M G++P+ V A++D K+ ++EA++L+ M E G P + +
Sbjct: 461 KAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACL 520
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
VDGF K + A +++ N + LI+GL + + A + +M G
Sbjct: 521 VDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGI 580
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVN 312
+P++ ++V ++ G +E+ + + + + G L N
Sbjct: 581 TPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPN 618
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 77/172 (44%), Gaps = 7/172 (4%)
Query: 154 SEPPQEADEIFKKMKETGLIPNAVAMLDGLCKD----GLIQEAMKLFGLMREKGTIPEVV 209
SEP + +F +++ ++ + L + GL +EA+ + RE P+
Sbjct: 109 SEPSNMSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEAL---WVSREMKCSPDSK 165
Query: 210 IYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEM 269
++++G + ++FD ++ M S G+ P+ Y +L Q +K + + EM
Sbjct: 166 ACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEM 225
Query: 270 LEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVREFLD 321
G PNV + + LCR+ +E+A+ + +K+ G L N +D
Sbjct: 226 TSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMID 277
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 63/124 (50%), Gaps = 3/124 (2%)
Query: 158 QEADEIFKKMKETGLIPN---AVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+EA ++ M E G+ PN ++DG K+G + A+ + ++ + V +T +
Sbjct: 496 KEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCL 555
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
++G C+ A R F M+S GI P+ SY +++G + ++ + + +M++ G
Sbjct: 556 IEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGI 615
Query: 275 SPNV 278
PN+
Sbjct: 616 LPNL 619
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 178 AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSN 237
+++GLC++G I A + F MR G P++ Y +++ G + ++ D + M
Sbjct: 554 CLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKT 613
Query: 238 GIAPNAFSYNLLIQGLYKCN 257
GI PN N L+ Y+ N
Sbjct: 614 GILPNLLV-NQLLARFYQAN 632
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 84/152 (55%), Gaps = 3/152 (1%)
Query: 160 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A E+ +KM+E + +AV ++DGLCK G + A LF M KG ++ Y ++
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
GFC A ++DD ++ R M I PN ++++LI K KL EA E EM+ G +P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
+ T+ L+DG C+E ++KA ++ + KG
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 83/146 (56%), Gaps = 3/146 (2%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+EA+E+ K+M G+ P+ + +++DG CK+ + +A ++ LM KG P + + +
Sbjct: 350 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNIL 409
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
++G+CKA + DD +FRKM G+ + +YN LIQG + KL A E EM+
Sbjct: 410 INGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV 469
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSV 300
PN+ T+ L+DGLC EKA +
Sbjct: 470 PPNIVTYKILLDGLCDNGESEKALEI 495
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 86/165 (52%), Gaps = 3/165 (1%)
Query: 160 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A E+F++M + PN V +LDGLC +G ++A+++F + + ++ IY ++
Sbjct: 457 AKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIH 516
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
G C A K DDA +F + G+ P +YN++I GL K L EA +M E GH+P
Sbjct: 517 GMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAP 576
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVREFLD 321
+ T+ L+ + K+ +I LK GF V+ ++ +D
Sbjct: 577 DGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID 621
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 3/135 (2%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
EA E+ +M E G P+ + +++GLC G EAM L M E G P V Y V
Sbjct: 175 SEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPV 234
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
++ CK+ + A + RKM+ I +A Y+++I GL K L+ A EM G
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGI 294
Query: 275 SPNVTTFVGLVDGLC 289
+ N+ T+ L+ G C
Sbjct: 295 TTNIITYNILIGGFC 309
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 80/153 (52%), Gaps = 3/153 (1%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
+A+++ M G PN +++G CK I + ++LF M +G + + V Y ++
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
GFC+ K + AK +F++M S + PN +Y +L+ GL + E+A+E ++ ++
Sbjct: 446 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKME 505
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
++ + ++ G+C V+ A + +L KG
Sbjct: 506 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 538
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 80/150 (53%), Gaps = 3/150 (2%)
Query: 162 EIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGF 218
E+F+KM G++ + V ++ G C+ G + A +LF M + P +V Y ++DG
Sbjct: 424 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 483
Query: 219 CKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNV 278
C + + A IF K++ + + + YN++I G+ +K+++A + + G P V
Sbjct: 484 CDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGV 543
Query: 279 TTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
T+ ++ GLC++ + +A+ + ++E G
Sbjct: 544 KTYNIMIGGLCKKGPLSEAELLFRKMEEDG 573
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 76/150 (50%), Gaps = 3/150 (2%)
Query: 166 KMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQ 222
K+ + G PN + +++GLC +G + EA++L M E G P+++ +V+G C +
Sbjct: 148 KIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSG 207
Query: 223 KFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFV 282
K +A + KM G PNA +Y ++ + K + A+E +M E + +
Sbjct: 208 KEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267
Query: 283 GLVDGLCRERGVEKAQSVIATLKEKGFLVN 312
++DGLC+ ++ A ++ ++ KG N
Sbjct: 268 IIIDGLCKHGSLDNAFNLFNEMEMKGITTN 297
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 73/136 (53%), Gaps = 7/136 (5%)
Query: 158 QEADEIFKKMKETGL-----IPNAVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYT 212
++A EIF+K++++ + I N + + G+C + +A LF + KG P V Y
Sbjct: 490 EKALEIFEKIEKSKMELDIGIYNII--IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYN 547
Query: 213 AVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEA 272
++ G CK +A+ +FRKM+ +G AP+ ++YN+LI+ ++V+ E+
Sbjct: 548 IMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRC 607
Query: 273 GHSPNVTTFVGLVDGL 288
G S + +T ++D L
Sbjct: 608 GFSVDASTIKMVIDML 623
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 63/118 (53%)
Query: 191 EAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLI 250
+A+ LF M +P V+ ++ + K +++D + ++M+ GIA N ++ +++I
Sbjct: 71 DAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMI 130
Query: 251 QGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
+C KL A ++++ G+ PN TF L++GLC E V +A ++ + E G
Sbjct: 131 NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 3/163 (1%)
Query: 149 RNEPISEPPQEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTI 205
R+ + +A ++F+ M + +P + + + K + L M KG
Sbjct: 61 RSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIA 120
Query: 206 PEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEY 265
+ + +++ FC+ +K A K+ G PN +++ LI GL ++ EA+E
Sbjct: 121 HNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALEL 180
Query: 266 CIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
M+E GH P++ T LV+GLC +A +I + E G
Sbjct: 181 VDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYG 223
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 68/146 (46%), Gaps = 3/146 (2%)
Query: 165 KKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKA 221
K+M+ G+ N M++ C+ + A G + + G P + ++ +++G C
Sbjct: 112 KQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLE 171
Query: 222 QKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTF 281
+ +A + +M G P+ + N L+ GL K EA+ +M+E G PN T+
Sbjct: 172 GRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTY 231
Query: 282 VGLVDGLCRERGVEKAQSVIATLKEK 307
+++ +C+ A ++ ++E+
Sbjct: 232 GPVLNVMCKSGQTALAMELLRKMEER 257
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 87/152 (57%), Gaps = 3/152 (1%)
Query: 159 EADEIFKKMKETGLIPNA---VAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
+A+E++ +M + PN ++++G C +G + EA ++F LM KG P+VV YT+++
Sbjct: 265 DAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLI 324
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
+GFCK +K DDA +IF +M G+ N +Y LIQG + K A E M+ G
Sbjct: 325 NGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVP 384
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEK 307
PN+ T+ L+ LC V+KA + ++++
Sbjct: 385 PNIRTYNVLLHCLCYNGKVKKALMIFEDMQKR 416
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 86/154 (55%), Gaps = 3/154 (1%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+EA + +M E G+ P+ V ++D LCK+G + A+ LF M G P+VV+YT++
Sbjct: 159 EEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSL 218
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
V+G C + ++ DA + R M I P+ ++N LI K K +A E EM+
Sbjct: 219 VNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSI 278
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
+PN+ T+ L++G C E V++A+ + ++ KG
Sbjct: 279 APNIFTYTSLINGFCMEGCVDEARQMFYLMETKG 312
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 82/153 (53%), Gaps = 3/153 (1%)
Query: 160 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A +F +M+ G+ P+ V ++++GLC G ++A L M ++ P+V+ + A++D
Sbjct: 196 ALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALID 255
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
F K KF DA+ ++ +M IAPN F+Y LI G ++EA + M G P
Sbjct: 256 AFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFP 315
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
+V + L++G C+ + V+ A + + +KG
Sbjct: 316 DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL 348
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 82/154 (53%), Gaps = 3/154 (1%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
++AD + + M + + P+ + A++D K+G +A +L+ M P + YT++
Sbjct: 229 RDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSL 288
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
++GFC D+A+++F M++ G P+ +Y LI G KC K+++A++ EM + G
Sbjct: 289 INGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL 348
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
+ N T+ L+ G + AQ V + + +G
Sbjct: 349 TGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRG 382
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 157 PQEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREK---GTIPEVVI 210
P A E+F M G+ PN +L LC +G +++A+ +F M+++ G P +
Sbjct: 368 PNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWT 427
Query: 211 YTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEML 270
Y ++ G C K + A +F M+ + +Y ++IQG+ K K++ AV +
Sbjct: 428 YNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLP 487
Query: 271 EAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
G PNV T+ ++ GL RE +A + +KE G
Sbjct: 488 SKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 85/191 (44%), Gaps = 41/191 (21%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA ++F M+ G P+ VA +++G CK + +AMK+F M +KG + YT ++
Sbjct: 300 EARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLI 359
Query: 216 DGF-----------------------------------CKAQKFDDAKRIFRKMQS---N 237
GF C K A IF MQ +
Sbjct: 360 QGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMD 419
Query: 238 GIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKA 297
G+APN ++YN+L+ GL KLE+A+ +M + + T+ ++ G+C+ V+ A
Sbjct: 420 GVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNA 479
Query: 298 QSVIATLKEKG 308
++ +L KG
Sbjct: 480 VNLFCSLPSKG 490
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 64/118 (54%)
Query: 191 EAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLI 250
EA+ LF M E +P ++ +T +++ K +KFD + +Q G++ + ++ NLL+
Sbjct: 55 EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLM 114
Query: 251 QGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
+ ++ A + +M++ G P++ TF L++G C +E+A S++ + E G
Sbjct: 115 NCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 62/129 (48%)
Query: 179 MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNG 238
+++ C+ A G M + G P++V +T++++GFC + ++A + +M G
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172
Query: 239 IAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQ 298
I P+ Y +I L K + A+ +M G P+V + LV+GLC A
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 299 SVIATLKEK 307
S++ + ++
Sbjct: 233 SLLRGMTKR 241
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 75/163 (46%), Gaps = 3/163 (1%)
Query: 149 RNEPISEPPQEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTI 205
RN S EA ++F M E+ +P+ + +L+ + K + L ++ G
Sbjct: 45 RNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVS 104
Query: 206 PEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEY 265
++ +++ FC++ + A KM G P+ ++ LI G N++EEA+
Sbjct: 105 HDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSM 164
Query: 266 CIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
+M+E G P+V + ++D LC+ V A S+ ++ G
Sbjct: 165 VNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYG 207
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 88/151 (58%), Gaps = 3/151 (1%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA ++K+M ++PN ++++G C G + +A +F LM KG P+VV Y ++
Sbjct: 272 EARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLI 331
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
GFCK+++ +D ++F +M G+ +AF+YN LI G + KL A + M++ G S
Sbjct: 332 TGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVS 391
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKE 306
P++ T+ L+D LC +EKA ++ L++
Sbjct: 392 PDIVTYNILLDCLCNNGKIEKALVMVEDLQK 422
Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 84/153 (54%), Gaps = 3/153 (1%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
+A +F M G P+ V ++ G CK +++ MKLF M +G + + Y ++
Sbjct: 307 DAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLI 366
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
G+C+A K + A+++F +M G++P+ +YN+L+ L K+E+A+ ++ ++
Sbjct: 367 HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD 426
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
++ T+ ++ GLCR +++A + +L KG
Sbjct: 427 VDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKG 459
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 74/138 (53%), Gaps = 3/138 (2%)
Query: 166 KMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQ 222
KM + G P+ V ++L+G C+ QEA+ L M G +P VVIY V++G CK +
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 198
Query: 223 KFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFV 282
++A +F M+ GI +A +YN LI GL + +A +M++ PNV F
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFT 258
Query: 283 GLVDGLCRERGVEKAQSV 300
L+D +E + +A+++
Sbjct: 259 ALIDTFVKEGNLLEARNL 276
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 76/153 (49%), Gaps = 3/153 (1%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
+A + + M + + PN + A++D K+G + EA L+ M + +P V Y +++
Sbjct: 237 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 296
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
+GFC DAK +F M S G P+ +YN LI G K ++E+ ++ EM G
Sbjct: 297 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 356
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
+ T+ L+ G C+ + AQ V + + G
Sbjct: 357 GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 389
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 3/154 (1%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
QEA + M G +PN V +++GLCK+ + A+++F M +KG + V Y +
Sbjct: 166 QEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTL 225
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+ G + ++ DA R+ R M I PN + LI K L EA EM+
Sbjct: 226 ISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSV 285
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
PNV T+ L++G C + A+ + + KG
Sbjct: 286 VPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 319
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 79/157 (50%), Gaps = 4/157 (2%)
Query: 160 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A E+F M++ G+ +AV ++ GL G +A +L M ++ P V+ +TA++D
Sbjct: 203 ALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALID 262
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
F K +A+ ++++M + PN F+YN LI G L +A M+ G P
Sbjct: 263 TFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFP 322
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVND 313
+V T+ L+ G C+ + VE + + +G LV D
Sbjct: 323 DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG-LVGD 358
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 68/122 (55%)
Query: 191 EAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLI 250
+A LF M + IP +V +T V+ K KFD ++ KM++ GI+ + +S+ +LI
Sbjct: 62 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 121
Query: 251 QGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFL 310
+C++L A+ +M++ G P++ T L++G C+ ++A S++ ++ GF+
Sbjct: 122 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 181
Query: 311 VN 312
N
Sbjct: 182 PN 183
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 65/131 (49%), Gaps = 7/131 (5%)
Query: 163 IFKKMKETGL---IPNAVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFC 219
++ KM+ G+ + + ++ C+ + A+ L G M + G P +V ++++GFC
Sbjct: 101 LYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFC 160
Query: 220 KAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVE--YCIEMLEAGHSPN 277
+ +F +A + M G PN YN +I GL K L A+E YC+E + G +
Sbjct: 161 QGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCME--KKGIRAD 218
Query: 278 VTTFVGLVDGL 288
T+ L+ GL
Sbjct: 219 AVTYNTLISGL 229
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 38/69 (55%)
Query: 179 MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNG 238
++ GLC+ ++EA LF + KG P+ + Y ++ G C+ +A ++ R+M+ +G
Sbjct: 435 IIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDG 494
Query: 239 IAPNAFSYN 247
P+ Y+
Sbjct: 495 FMPSERIYD 503
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 93/152 (61%), Gaps = 3/152 (1%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA E+F++M + P+ V ++++GLC I EA ++F LM KG + +VV Y ++
Sbjct: 278 EAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI 337
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
+GFCKA++ +D ++FR+M G+ N +YN LIQG ++ +++A E+ +M G S
Sbjct: 338 NGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 397
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEK 307
P++ T+ L+ GLC +EKA + ++++
Sbjct: 398 PDIWTYNILLGGLCDNGELEKALVIFEDMQKR 429
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 3/158 (1%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+A + KM E G P+ VA ++D LCK + +A F + KG P VV YTA+
Sbjct: 172 SDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTAL 231
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
V+G C + ++ DA R+ M I PN +Y+ L+ K K+ EA E EM+
Sbjct: 232 VNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI 291
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVN 312
P++ T+ L++GLC +++A + + KG L +
Sbjct: 292 DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 329
Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 87/154 (56%), Gaps = 3/154 (1%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA+++F M G + + V+ +++G CK +++ MKLF M ++G + V Y ++
Sbjct: 313 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 372
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
GF +A D A+ F +M GI+P+ ++YN+L+ GL +LE+A+ +M +
Sbjct: 373 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD 432
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
++ T+ ++ G+C+ VE+A S+ +L KG
Sbjct: 433 LDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 466
Score = 81.6 bits (200), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 86/157 (54%), Gaps = 3/157 (1%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
+A + FK+++ G+ PN V A+++GLC +A +L M +K P V+ Y+A++
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
D F K K +AK +F +M I P+ +Y+ LI GL ++++EA + M+ G
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVN 312
+V ++ L++G C+ + VE + + ++G + N
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 78/144 (54%), Gaps = 3/144 (2%)
Query: 160 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A I KM + G P+ V ++++G C+ + +A+ L M E G P++V Y A++D
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
CK ++ +DA F++++ GI PN +Y L+ GL ++ +A +M++ +P
Sbjct: 199 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258
Query: 277 NVTTFVGLVDGLCRERGVEKAQSV 300
NV T+ L+D + V +A+ +
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKEL 282
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 76/148 (51%), Gaps = 3/148 (2%)
Query: 154 SEPPQEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVI 210
S +A + M + + PN + A+LD K+G + EA +LF M P++V
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 211 YTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEML 270
Y+++++G C + D+A ++F M S G + SYN LI G K ++E+ ++ EM
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 271 EAGHSPNVTTFVGLVDGLCRERGVEKAQ 298
+ G N T+ L+ G + V+KAQ
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQ 385
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 65/133 (48%)
Query: 189 IQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNL 248
+ A+ + G M + G P+ V ++V+GFC+ + DA + KM G P+ +YN
Sbjct: 136 VSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNA 195
Query: 249 LIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
+I L K ++ +A ++ E+ G PNV T+ LV+GLC A +++ + +K
Sbjct: 196 IIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK 255
Query: 309 FLVNDKAVREFLD 321
N LD
Sbjct: 256 ITPNVITYSALLD 268
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 65/125 (52%)
Query: 185 KDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAF 244
+D + +A+ LF M + P +V + ++ K +K+D + +KM+ GI + +
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 245 SYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATL 304
++N++I C ++ A+ +ML+ G+ P+ T LV+G CR V A S++ +
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 305 KEKGF 309
E G+
Sbjct: 182 VEIGY 186
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 3/126 (2%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
+A E F +M G+ P+ +L GLC +G +++A+ +F M+++ ++V YT V+
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
G CK K ++A +F + G+ P+ +Y ++ GL L E +M + G
Sbjct: 443 RGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLM 502
Query: 276 PNVTTF 281
N T
Sbjct: 503 KNDCTL 508
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 52/111 (46%)
Query: 199 MREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNK 258
M G ++ + V++ FC + A I KM G P+ + L+ G + N+
Sbjct: 111 MEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNR 170
Query: 259 LEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
+ +AV +M+E G+ P++ + ++D LC+ + V A ++ KG
Sbjct: 171 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGI 221
>sp|Q9FNL2|PP418_ARATH Pentatricopeptide repeat-containing protein At5g46100
OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1
Length = 472
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 90/151 (59%), Gaps = 3/151 (1%)
Query: 162 EIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGF 218
+IF +M + G P++ ++ GLC+ G I EA KLF M EK P VV YT++++G
Sbjct: 178 KIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGL 237
Query: 219 CKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNV 278
C ++ D+A R +M+S GI PN F+Y+ L+ GL K + +A+E M+ G PN+
Sbjct: 238 CGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNM 297
Query: 279 TTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
T+ L+ GLC+E+ +++A ++ + +G
Sbjct: 298 VTYTTLITGLCKEQKIQEAVELLDRMNLQGL 328
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 103/220 (46%), Gaps = 30/220 (13%)
Query: 154 SEPPQEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVI 210
S+ EA ++MK G+ PN +++DGLCKDG +AM+LF +M +G P +V
Sbjct: 240 SKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVT 299
Query: 211 YTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEML 270
YT ++ G CK QK +A + +M G+ P+A Y +I G +K EA + EM+
Sbjct: 300 YTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMI 359
Query: 271 EAGHSPN-------VTTFVGLVDGLC--------------RERG----VEKAQSVIATLK 305
G +PN V T +V GLC R RG VE +S++ L
Sbjct: 360 LGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLC 419
Query: 306 EKG-FLVNDKAVREFLDKKAPFSSSVWEAIFGKKTLQKPF 344
+KG F + V E + S W+ + G TL K
Sbjct: 420 KKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIG-HTLDKTI 458
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 4/153 (2%)
Query: 160 ADEIFKKMKETGLIPNAVAM---LDGLCK-DGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
A + +K M+E GL P ++ + LC+ DG + +K+F M ++G P+ Y ++
Sbjct: 140 AFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLI 199
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
G C+ + D+AK++F +M AP +Y LI GL ++EA+ Y EM G
Sbjct: 200 SGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIE 259
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
PNV T+ L+DGLC++ +A + + +G
Sbjct: 260 PNVFTYSSLMDGLCKDGRSLQAMELFEMMMARG 292
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA ++F +M E P V ++++GLC + EAM+ M+ KG P V Y++++
Sbjct: 210 EAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLM 269
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
DG CK + A +F M + G PN +Y LI GL K K++EAVE M G
Sbjct: 270 DGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLK 329
Query: 276 PNVTTFVGLVDGLC 289
P+ + ++ G C
Sbjct: 330 PDAGLYGKVISGFC 343
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 81/157 (51%), Gaps = 4/157 (2%)
Query: 157 PQEADEIFKKMKETGLIPN---AVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTA 213
P ++ +F KMK+ P+ V +L L ++ + A K + MRE G P V
Sbjct: 102 PFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNV 161
Query: 214 VVDGFCKAQKFDDAK-RIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEA 272
++ C+ DA +IF +M G P++++Y LI GL + +++EA + EM+E
Sbjct: 162 LIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEK 221
Query: 273 GHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
+P V T+ L++GLC + V++A + +K KG
Sbjct: 222 DCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGI 258
Score = 38.1 bits (87), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%)
Query: 210 IYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEM 269
I ++ G+ + + D+ R+F KM+ P+ +Y ++ L + N+L A ++ M
Sbjct: 88 ILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNM 147
Query: 270 LEAGHSPNVTTFVGLVDGLCRERGVEKA 297
E G P V + L+ LCR G A
Sbjct: 148 REIGLPPTVASLNVLIKALCRNDGTVDA 175
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 88/154 (57%), Gaps = 3/154 (1%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
EA+E +++M L P+ V ++ GLC + EA ++FG M KG P+VV Y+ +
Sbjct: 273 SEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSIL 332
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
++G+CK++K + ++F +M G+ N +Y +LIQG + KL A E M+ G
Sbjct: 333 INGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGV 392
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
PN+ T+ L+ GLC +EKA ++A +++ G
Sbjct: 393 HPNIITYNVLLHGLCDNGKIEKALVILADMQKNG 426
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 87/155 (56%), Gaps = 3/155 (1%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA+E+F M G P+ V +++G CK ++ MKLF M ++G + V YT ++
Sbjct: 309 EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILI 368
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
G+C+A K + A+ IFR+M G+ PN +YN+L+ GL K+E+A+ +M + G
Sbjct: 369 QGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMD 428
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFL 310
++ T+ ++ G+C+ V A + +L +G +
Sbjct: 429 ADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLM 463
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 80/153 (52%), Gaps = 3/153 (1%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
+A +F +M G PN V ++DGLCK + A+ L M + G P+VV Y +++
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
G C + ++ DA R+ M I P+ F++N LI K ++ EA E+ EM+
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
P++ T+ L+ GLC +++A+ + + KG
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG 321
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 75/142 (52%), Gaps = 3/142 (2%)
Query: 160 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A KM + G P+ V ++L+G C+ + +A+ +F M G P VVIY ++D
Sbjct: 135 ALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIID 194
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
G CK+++ D+A + +M+ +GI P+ +YN LI GL + +A M + P
Sbjct: 195 GLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYP 254
Query: 277 NVTTFVGLVDGLCRERGVEKAQ 298
+V TF L+D +E V +A+
Sbjct: 255 DVFTFNALIDACVKEGRVSEAE 276
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 86/162 (53%), Gaps = 3/162 (1%)
Query: 154 SEPPQEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVI 210
S+ A ++ +M++ G+ P+ V +++ GLC G +A ++ M ++ P+V
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 211 YTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEML 270
+ A++D K + +A+ + +M + P+ +Y+LLI GL ++L+EA E M+
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 271 EAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVN 312
G P+V T+ L++G C+ + VE + + ++G + N
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 65/123 (52%)
Query: 178 AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSN 237
A++D K+G + EA + + M + P++V Y+ ++ G C + D+A+ +F M S
Sbjct: 261 ALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSK 320
Query: 238 GIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKA 297
G P+ +Y++LI G K K+E ++ EM + G N T+ L+ G CR + A
Sbjct: 321 GCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVA 380
Query: 298 QSV 300
+ +
Sbjct: 381 EEI 383
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 76/148 (51%), Gaps = 3/148 (2%)
Query: 163 IFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFC 219
++++M+ G+ N +L+ C+ + A+ G M + G P +V + ++++GFC
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFC 162
Query: 220 KAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVT 279
+ + DA +F +M G PN YN +I GL K +++ A++ M + G P+V
Sbjct: 163 RGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVV 222
Query: 280 TFVGLVDGLCRERGVEKAQSVIATLKEK 307
T+ L+ GLC A +++ + ++
Sbjct: 223 TYNSLISGLCSSGRWSDATRMVSCMTKR 250
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 64/121 (52%)
Query: 189 IQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNL 248
+ +++ LF M + +P + ++ ++ K +K+D ++ +MQ GI N + N+
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 249 LIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
L+ +C++L A+ + +M++ GH P++ TF L++G CR V A + + G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 309 F 309
+
Sbjct: 182 Y 182
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 102 bits (253), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA+++F +M + + PN V ++++G C + EA ++F LM K +P+VV Y ++
Sbjct: 328 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
+GFCKA+K D +FR M G+ N +Y LI G ++ + + A +M+ G
Sbjct: 388 NGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVH 447
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKE 306
PN+ T+ L+DGLC+ +EKA V L++
Sbjct: 448 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQK 478
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 85/153 (55%), Gaps = 3/153 (1%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA +IF M +P+ V +++G CK + + M+LF M +G + V YT ++
Sbjct: 363 EAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLI 422
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
GF +A D+A+ +F++M S+G+ PN +YN L+ GL K KLE+A+ + ++
Sbjct: 423 HGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKME 482
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
P++ T+ + +G+C+ VE + +L KG
Sbjct: 483 PDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKG 515
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 81/148 (54%), Gaps = 5/148 (3%)
Query: 157 PQEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTI-PEVVIYT 212
EA + ++M G P+ V A+++GLCK G A+ L M EKG I +VVIY+
Sbjct: 186 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM-EKGKIEADVVIYS 244
Query: 213 AVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEA 272
V+D CK + DDA +F +M + GI P+ F+Y+ LI L + +A +MLE
Sbjct: 245 TVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER 304
Query: 273 GHSPNVTTFVGLVDGLCRERGVEKAQSV 300
+PNV TF L+D +E + +A+ +
Sbjct: 305 KINPNVVTFNSLIDAFAKEGKLIEAEKL 332
Score = 81.3 bits (199), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 79/167 (47%), Gaps = 3/167 (1%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+A + M E + PN V +++D K+G + EA KLF M ++ P +V Y ++
Sbjct: 292 SDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL 351
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
++GFC + D+A++IF M S P+ +YN LI G K K+ + +E +M G
Sbjct: 352 INGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGL 411
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVREFLD 321
N T+ L+ G + + AQ V + G N LD
Sbjct: 412 VGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 458
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 3/157 (1%)
Query: 157 PQEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTA 213
P A + KM++ + + V ++D LCK + +A+ LF M KG P+V Y++
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280
Query: 214 VVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAG 273
++ C ++ DA R+ M I PN ++N LI K KL EA + EM++
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 340
Query: 274 HSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFL 310
PN+ T+ L++G C +++AQ + + K L
Sbjct: 341 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL 377
Score = 78.2 bits (191), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
Query: 160 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A +FK+M G+ PN + +LDGLCK+G +++AM +F +++ P++ Y + +
Sbjct: 434 AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSE 493
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
G CKA K +D +F + G+ P+ +YN +I G K EEA I+M E G P
Sbjct: 494 GMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLP 553
Query: 277 NVTTFVGLVDGLCRE 291
+ T+ L+ R+
Sbjct: 554 DSGTYNTLIRAHLRD 568
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 76/150 (50%), Gaps = 3/150 (2%)
Query: 162 EIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGF 218
E+F+ M GL+ N V ++ G + A +F M G P ++ Y ++DG
Sbjct: 401 ELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 460
Query: 219 CKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNV 278
CK K + A +F +Q + + P+ ++YN++ +G+ K K+E+ + + G P+V
Sbjct: 461 CKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDV 520
Query: 279 TTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
+ ++ G C++ E+A ++ +KE G
Sbjct: 521 IAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 79/157 (50%), Gaps = 3/157 (1%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
+A +F +M G+ P+ +++ LC G +A +L M E+ P VV + +++
Sbjct: 258 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLI 317
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
D F K K +A+++F +M I PN +YN LI G ++L+EA + M+
Sbjct: 318 DAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL 377
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVN 312
P+V T+ L++G C+ + V + + +G + N
Sbjct: 378 PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGN 414
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 4/132 (3%)
Query: 165 KKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKA 221
+KM+ G+ N M++ LC+ + A+ + G M + G P +V ++++GFC
Sbjct: 89 EKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHG 148
Query: 222 QKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTF 281
+ +A + +M G P+ ++ L+ GL++ NK EAV M+ G P++ T+
Sbjct: 149 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 208
Query: 282 VGLVDGLCRERG 293
+++GLC+ RG
Sbjct: 209 GAVINGLCK-RG 219
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 67/121 (55%)
Query: 189 IQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNL 248
+ EA+ LFG M + P +V ++ ++ K +KFD KM+ G++ N ++YN+
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 249 LIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
+I L + ++L A+ +M++ G+ P++ T L++G C + +A +++ + E G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 309 F 309
+
Sbjct: 166 Y 166
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 160 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A I KM + G P+ V ++L+G C I EA+ L M E G P+ V +T +V
Sbjct: 119 ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH 178
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
G + K +A + +M G P+ +Y +I GL K + + A+ +M +
Sbjct: 179 GLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEA 238
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
+V + ++D LC+ R V+ A ++ + KG
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI 271
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 76/143 (53%), Gaps = 4/143 (2%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
++A +F+ ++++ + P+ M +G+CK G +++ LF + KG P+V+ Y +
Sbjct: 467 EKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTM 526
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+ GFCK ++A +F KM+ +G P++ +YN LI+ + + E EM
Sbjct: 527 ISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRF 586
Query: 275 SPNVTTFVGLVDGLCRERGVEKA 297
+ + +T+ GLV + + ++K
Sbjct: 587 AGDASTY-GLVTDMLHDGRLDKG 608
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 102 bits (253), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 92/160 (57%), Gaps = 4/160 (2%)
Query: 154 SEPPQEADEIFKKMKETGLIPNA---VAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVI 210
SE EA + K+M+ETG+ PN ++D LC ++A +L G M EKG +P V+
Sbjct: 336 SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395
Query: 211 YTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEML 270
Y A+++G+CK +DA + M+S ++PN +YN LI+G K N + +A+ +ML
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKML 454
Query: 271 EAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFL 310
E P+V T+ L+DG CR + A +++ + ++G +
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 81/143 (56%), Gaps = 3/143 (2%)
Query: 160 ADEIFKKMKETGLIPN---AVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A + M + GL+P+ +M+D LCK ++EA LF + +KG P VV+YTA++D
Sbjct: 481 AYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALID 540
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
G+CKA K D+A + KM S PN+ ++N LI GL KL+EA +M++ G P
Sbjct: 541 GYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600
Query: 277 NVTTFVGLVDGLCRERGVEKAQS 299
V+T L+ L ++ + A S
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYS 623
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 37/192 (19%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMR-------------- 200
++A E+ +M E GL+PN + A+++G CK G+I++A+ + LM
Sbjct: 375 EKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNEL 434
Query: 201 --------------------EKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIA 240
E+ +P+VV Y +++DG C++ FD A R+ M G+
Sbjct: 435 IKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494
Query: 241 PNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSV 300
P+ ++Y +I L K ++EEA + + + G +PNV + L+DG C+ V++A +
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554
Query: 301 IATLKEKGFLVN 312
+ + K L N
Sbjct: 555 LEKMLSKNCLPN 566
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 91/178 (51%), Gaps = 5/178 (2%)
Query: 160 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A ++F +M G N VA ++ GLC I EAM LF M++ P V YT ++
Sbjct: 272 AFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIK 331
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
C +++ +A + ++M+ GI PN +Y +LI L K E+A E +MLE G P
Sbjct: 332 SLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMP 391
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVREFLDKKAPFSSSVWEAI 334
NV T+ L++G C+ +E A V+ ++ + N + E + K S+V +A+
Sbjct: 392 NVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELI--KGYCKSNVHKAM 447
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 79/143 (55%), Gaps = 3/143 (2%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+A + KM E ++P+ V +++DG C+ G A +L LM ++G +P+ YT++
Sbjct: 444 HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSM 503
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+D CK+++ ++A +F ++ G+ PN Y LI G K K++EA +ML
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNC 563
Query: 275 SPNVTTFVGLVDGLCRERGVEKA 297
PN TF L+ GLC + +++A
Sbjct: 564 LPNSLTFNALIHGLCADGKLKEA 586
Score = 89.0 bits (219), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 3/158 (1%)
Query: 158 QEADEIFKKMKETGLIPN---AVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+EA++ K+ E GL P+ +++ G C+ + A K+F M KG V YT +
Sbjct: 235 EEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHL 294
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+ G C A++ D+A +F KM+ + P +Y +LI+ L + EA+ EM E G
Sbjct: 295 IHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGI 354
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVN 312
PN+ T+ L+D LC + EKA+ ++ + EKG + N
Sbjct: 355 KPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPN 392
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 6/156 (3%)
Query: 159 EADEIFKKMKETGLIPNA---VAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA ++F KMK+ P ++ LC EA+ L M E G P + YT ++
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH- 274
D C KF+ A+ + +M G+ PN +YN LI G K +E+AV+ +E++E+
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDV-VELMESRKL 424
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFL 310
SPN T+ L+ G C+ V KA V+ + E+ L
Sbjct: 425 SPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVL 459
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 79/158 (50%), Gaps = 3/158 (1%)
Query: 154 SEPPQEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVI 210
S+ +EA ++F +++ G+ PN V A++DG CK G + EA + M K +P +
Sbjct: 510 SKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLT 569
Query: 211 YTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEML 270
+ A++ G C K +A + KM G+ P + +LI L K + A +ML
Sbjct: 570 FNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQML 629
Query: 271 EAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
+G P+ T+ + CRE + A+ ++A ++E G
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 69/132 (52%), Gaps = 3/132 (2%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA + +KM +PN++ A++ GLC DG ++EA L M + G P V T ++
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILI 609
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
K FD A F++M S+G P+A +Y IQ + +L +A + +M E G S
Sbjct: 610 HRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVS 669
Query: 276 PNVTTFVGLVDG 287
P++ T+ L+ G
Sbjct: 670 PDLFTYSSLIKG 681
Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 158 QEADEIFKKMKETGLIPNA---VAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+EA + +KM + GL P ++ L KDG A F M GT P+ YT
Sbjct: 584 KEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTF 643
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+ +C+ + DA+ + KM+ NG++P+ F+Y+ LI+G + A + M + G
Sbjct: 644 IQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGC 703
Query: 275 SPNVTTFVGLVDGL 288
P+ TF+ L+ L
Sbjct: 704 EPSQHTFLSLIKHL 717
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 1/146 (0%)
Query: 161 DEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCK 220
DE F+ +K +I +L+ L + GL+ E +++ M E P + Y +V+G+CK
Sbjct: 172 DERFE-LKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCK 230
Query: 221 AQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTT 280
++A + K+ G+ P+ F+Y LI G + L+ A + EM G N
Sbjct: 231 LGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVA 290
Query: 281 FVGLVDGLCRERGVEKAQSVIATLKE 306
+ L+ GLC R +++A + +K+
Sbjct: 291 YTHLIHGLCVARRIDEAMDLFVKMKD 316
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 58/110 (52%)
Query: 211 YTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEML 270
Y +++ + D+ K+++ +M + + PN ++YN ++ G K +EEA +Y +++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 271 EAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVREFL 320
EAG P+ T+ L+ G C+ + ++ A V + KG N+ A +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLI 295
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 78/151 (51%), Gaps = 4/151 (2%)
Query: 162 EIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLM-REKGTIPEVVIYTAVVDG 217
E+ +KM E + PNA + ++ G+C+ G ++ A K+F M R +G P +++ A++
Sbjct: 746 ELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSC 805
Query: 218 FCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPN 277
CK +K ++A ++ M G P S +LI GLYK + E +L+ G+ +
Sbjct: 806 CCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYED 865
Query: 278 VTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
+ ++DG+ ++ VE + +++ G
Sbjct: 866 ELAWKIIIDGVGKQGLVEAFYELFNVMEKNG 896
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 22/184 (11%)
Query: 160 ADEIFKKMKETG----------LIPNAVAMLDG--------LCKDGLIQE---AMKLFGL 198
A ++ K+M++TG LI + + M G LC + E ++L
Sbjct: 691 AFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEK 750
Query: 199 MREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSN-GIAPNAFSYNLLIQGLYKCN 257
M E P Y ++ G C+ A+++F MQ N GI+P+ +N L+ K
Sbjct: 751 MVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLK 810
Query: 258 KLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVR 317
K EA + +M+ GH P + + L+ GL ++ E+ SV L + G+ ++ A +
Sbjct: 811 KHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWK 870
Query: 318 EFLD 321
+D
Sbjct: 871 IIID 874
Score = 33.9 bits (76), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Query: 159 EADEIFKKMKETGLIP---NAVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA ++ M G +P + ++ GL K G + +F + + G + + + ++
Sbjct: 814 EAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIII 873
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQG 252
DG K + +F M+ NG ++ +Y+LLI+G
Sbjct: 874 DGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 102 bits (253), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 88/152 (57%), Gaps = 3/152 (1%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
QEA+E++K+M G+ PN + ++DG C + EA + LM P++V +T++
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSL 374
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+ G+C ++ DD ++FR + G+ NA +Y++L+QG + K++ A E EM+ G
Sbjct: 375 IKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGV 434
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKE 306
P+V T+ L+DGLC +EKA + L++
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 466
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 82/145 (56%), Gaps = 3/145 (2%)
Query: 160 ADEIFKKMKETGL---IPNAVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A ++ +KM+E + + ++D LC+DG I A+ LF M KG VV Y ++V
Sbjct: 212 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
G CKA K++D + + M S I PN ++N+L+ K KL+EA E EM+ G SP
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVI 301
N+ T+ L+DG C + + +A +++
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNML 356
Score = 91.7 bits (226), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 94/165 (56%), Gaps = 3/165 (1%)
Query: 160 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A+E+F++M G++P+ + +LDGLC +G +++A+++F +++ +V+YT +++
Sbjct: 422 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 481
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
G CK K +DA +F + G+ PN +Y ++I GL K L EA +M E G++P
Sbjct: 482 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 541
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVREFLD 321
N T+ L+ R+ + + +I +K GF + +++ +D
Sbjct: 542 NDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 586
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 81/150 (54%), Gaps = 3/150 (2%)
Query: 162 EIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGF 218
++F+ + + GL+ NAV ++ G C+ G I+ A +LF M G +P+V+ Y ++DG
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Query: 219 CKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNV 278
C K + A IF +Q + + Y +I+G+ K K+E+A + G PNV
Sbjct: 449 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 508
Query: 279 TTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
T+ ++ GLC++ + +A ++ ++E G
Sbjct: 509 MTYTVMISGLCKKGSLSEANILLRKMEEDG 538
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 3/155 (1%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
EA + +M E G P+ V ++++G+C+ G A+ L M E+ +V Y+ +
Sbjct: 175 SEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTI 234
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+D C+ D A +F++M++ GI + +YN L++GL K K + +M+
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
PNV TF L+D +E +++A + + +G
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 329
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 73/134 (54%), Gaps = 3/134 (2%)
Query: 158 QEADEIFKKMKETGL---IPNAVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
++A EIF+ ++++ + I +++G+CK G +++A LF + KG P V+ YT +
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 514
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+ G CK +A + RKM+ +G APN +YN LI+ + L + + EM G
Sbjct: 515 ISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574
Query: 275 SPNVTTFVGLVDGL 288
S + ++ ++D L
Sbjct: 575 SADASSIKMVIDML 588
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Query: 160 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A + K+ + G P+ ++ GL +G + EA+ L M E G P+VV Y ++V+
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
G C++ A + RKM+ + + F+Y+ +I L + ++ A+ EM G
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261
Query: 277 NVTTFVGLVDGLCR 290
+V T+ LV GLC+
Sbjct: 262 SVVTYNSLVRGLCK 275
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 210 IYT--AVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCI 267
IYT +++ FC+ K A + K+ G P+ ++N LI+GL+ K+ EAV
Sbjct: 123 IYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVD 182
Query: 268 EMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEK 307
M+E G P+V T+ +V+G+CR A ++ ++E+
Sbjct: 183 RMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER 222
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 60/118 (50%)
Query: 191 EAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLI 250
+A+ LF M +P +V ++ + ++F+ ++++ NGIA N ++ N++I
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 251 QGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
+C K A ++++ G+ P+ TTF L+ GL E V +A ++ + E G
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 61/131 (46%)
Query: 179 MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNG 238
M++ C+ A + G + + G P+ + ++ G K +A + +M NG
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188
Query: 239 IAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQ 298
P+ +YN ++ G+ + A++ +M E +V T+ ++D LCR+ ++ A
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 299 SVIATLKEKGF 309
S+ ++ KG
Sbjct: 249 SLFKEMETKGI 259
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 101 bits (252), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA++++ +M + + P+ V ++++G C + EA ++F M K P+VV Y ++
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 403
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
GFCK ++ ++ +FR+M G+ N +YN+LIQGL++ + A E EM+ G
Sbjct: 404 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP 463
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLK 305
PN+ T+ L+DGLC+ +EKA V L+
Sbjct: 464 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 85/158 (53%), Gaps = 3/158 (1%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+E E+F++M + GL+ N V ++ GL + G A ++F M G P ++ Y +
Sbjct: 413 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 472
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+DG CK K + A +F +Q + + P ++YN++I+G+ K K+E+ + + G
Sbjct: 473 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV 532
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVN 312
P+V + ++ G CR+ E+A ++ +KE G L N
Sbjct: 533 KPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPN 570
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 79/153 (51%), Gaps = 3/153 (1%)
Query: 160 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A EIFK+M G+ PN + +LDGLCK+G +++AM +F ++ P + Y +++
Sbjct: 450 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 509
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
G CKA K +D +F + G+ P+ +YN +I G + EEA EM E G P
Sbjct: 510 GMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 569
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
N + L+ R+ E + +I ++ GF
Sbjct: 570 NSGCYNTLIRARLRDGDREASAELIKEMRSCGF 602
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 81/153 (52%), Gaps = 3/153 (1%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA ++F+ M P+ V ++ G CK ++E M++F M ++G + V Y ++
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
G +A D A+ IF++M S+G+ PN +YN L+ GL K KLE+A+ + +
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
P + T+ +++G+C+ VE + L KG
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 531
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 76/147 (51%), Gaps = 3/147 (2%)
Query: 157 PQEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTA 213
EA + +M G P+ V +++GLCK G A L M + P V+IY
Sbjct: 202 ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 261
Query: 214 VVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAG 273
++DG CK + DDA +F++M++ GI PN +Y+ LI L + +A +M+E
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 274 HSPNVTTFVGLVDGLCRERGVEKAQSV 300
+P+V TF L+D +E + +A+ +
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKL 348
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 85/157 (54%), Gaps = 3/157 (1%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
+A +FK+M+ G+ PN V +++ LC G +A +L M E+ P+V ++A++
Sbjct: 274 DALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALI 333
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
D F K K +A++++ +M I P+ +Y+ LI G ++L+EA + M+
Sbjct: 334 DAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 393
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVN 312
P+V T+ L+ G C+ + VE+ V + ++G + N
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 430
Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 78/151 (51%), Gaps = 3/151 (1%)
Query: 160 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A + KM++ L P + ++DGLCK + +A+ LF M KG P VV Y++++
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
C ++ DA R+ M I P+ F+++ LI K KL EA + EM++ P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEK 307
++ T+ L++G C +++A+ + + K
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSK 390
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 73/158 (46%), Gaps = 7/158 (4%)
Query: 153 ISEPPQEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVV 209
ISE D++F TG PN V ++ GL EAM L M KG P++V
Sbjct: 167 ISEAVALVDQMFV----TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLV 222
Query: 210 IYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEM 269
Y VV+G CK D A + KM+ + P YN +I GL K +++A+ EM
Sbjct: 223 TYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM 282
Query: 270 LEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEK 307
G PNV T+ L+ LC A +++ + E+
Sbjct: 283 ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 320
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 78/143 (54%), Gaps = 4/143 (2%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
++A +F+ ++ + + P M++G+CK G +++ LF + KG P+VV Y +
Sbjct: 483 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTM 542
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+ GFC+ ++A +F++M+ +G PN+ YN LI+ + E + E EM G
Sbjct: 543 ISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 602
Query: 275 SPNVTTFVGLVDGLCRERGVEKA 297
+ + +T +GLV + + ++K+
Sbjct: 603 AGDAST-IGLVTNMLHDGRLDKS 624
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 76/142 (53%), Gaps = 4/142 (2%)
Query: 179 MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNG 238
+++ C+ + A+ + G M + G P +V +++++G+C +++ +A + +M G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 239 IAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQ 298
PN ++N LI GL+ NK EA+ M+ G P++ T+ +V+GLC+ + A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 299 SVIATLK----EKGFLVNDKAV 316
+++ ++ E G L+ + +
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTII 263
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 3/153 (1%)
Query: 160 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A + KM + G PN V ++L+G C I EA+ L M G P V + ++
Sbjct: 135 ALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIH 194
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
G K +A + +M + G P+ +Y +++ GL K + A +M + P
Sbjct: 195 GLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEP 254
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
V + ++DGLC+ + ++ A ++ ++ KG
Sbjct: 255 GVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 287
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 71/131 (54%), Gaps = 4/131 (3%)
Query: 183 LCKDGL----IQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNG 238
L ++GL + +A+ LFG M + P ++ ++ ++ K KFD + +MQ+ G
Sbjct: 52 LSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG 111
Query: 239 IAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQ 298
I N ++Y++LI + ++L A+ +M++ G+ PN+ T L++G C + + +A
Sbjct: 112 IPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAV 171
Query: 299 SVIATLKEKGF 309
+++ + G+
Sbjct: 172 ALVDQMFVTGY 182
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 71/167 (42%), Gaps = 3/167 (1%)
Query: 145 QKPNRNEPISEPPQEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMRE 201
+K +RN +A +F +M ++ P+ + +L + K + L M+
Sbjct: 50 EKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN 109
Query: 202 KGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEE 261
G Y+ +++ FC+ + A + KM G PN + + L+ G ++ E
Sbjct: 110 LGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISE 169
Query: 262 AVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
AV +M G+ PN TF L+ GL +A ++I + KG
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG 216
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 101 bits (251), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 90/155 (58%), Gaps = 3/155 (1%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA + ++M + G P+ V A+++G C G +++A+ + M+EKG P+VV Y+ V+
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
GFC++ D+A R+ R+M GI P+ +Y+ LIQG + + +EA + EML G
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFL 310
P+ T+ L++ C E +EKA + + EKG L
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 82/153 (53%), Gaps = 3/153 (1%)
Query: 160 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A+ +FK+M E+ + PN ++ G C G I A+ LF M KG +P VV Y ++D
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
G+CK +K DD ++ R M G+ PN SYN++I GL + +++E EM G+S
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
+ T+ L+ G C+E +A + A + G
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL 341
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 3/155 (1%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+A + +M GL P+ + +++ +CK G + AM+ MR +G P YT +
Sbjct: 327 HQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTL 386
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
VDGF + ++A R+ R+M NG +P+ +YN LI G K+E+A+ +M E G
Sbjct: 387 VDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL 446
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
SP+V ++ ++ G CR V++A V + EKG
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI 481
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 81/165 (49%), Gaps = 3/165 (1%)
Query: 160 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A +F KM+ G +PN V ++DG CK I + KL M KG P ++ Y V++
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
G C+ + + + +M G + + +YN LI+G K +A+ EML G +P
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVREFLD 321
+V T+ L+ +C+ + +A + ++ +G N++ +D
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVD 388
Score = 85.1 bits (209), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 75/141 (53%), Gaps = 3/141 (2%)
Query: 160 ADEIFKKMKETGLIPN---AVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A E +M+ GL PN ++DG + G + EA ++ M + G P VV Y A+++
Sbjct: 364 AMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALIN 423
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
G C K +DA + M+ G++P+ SY+ ++ G + ++EA+ EM+E G P
Sbjct: 424 GHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKP 483
Query: 277 NVTTFVGLVDGLCRERGVEKA 297
+ T+ L+ G C +R ++A
Sbjct: 484 DTITYSSLIQGFCEQRRTKEA 504
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 89/155 (57%), Gaps = 3/155 (1%)
Query: 153 ISEPPQEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVV 209
++ ++A + + MKE GL P+ V+ +L G C+ + EA+++ M EKG P+ +
Sbjct: 427 VTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTI 486
Query: 210 IYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEM 269
Y++++ GFC+ ++ +A ++ +M G+ P+ F+Y LI LE+A++ EM
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546
Query: 270 LEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATL 304
+E G P+V T+ L++GL ++ +A+ ++ L
Sbjct: 547 VEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%)
Query: 178 AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSN 237
++ G CK+G +A+ + M G P V+ YT+++ CKA + A +M+
Sbjct: 315 TLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR 374
Query: 238 GIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKA 297
G+ PN +Y L+ G + + EA EM + G SP+V T+ L++G C +E A
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDA 434
Query: 298 QSVIATLKEKGF 309
+V+ +KEKG
Sbjct: 435 IAVLEDMKEKGL 446
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 78/151 (51%), Gaps = 3/151 (1%)
Query: 162 EIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGF 218
++ + M GL PN ++ +++GLC++G ++E + M +G + V Y ++ G+
Sbjct: 261 KLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGY 320
Query: 219 CKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNV 278
CK F A + +M +G+ P+ +Y LI + K + A+E+ +M G PN
Sbjct: 321 CKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNE 380
Query: 279 TTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
T+ LVDG ++ + +A V+ + + GF
Sbjct: 381 RTYTTLVDGFSQKGYMNEAYRVLREMNDNGF 411
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 86/158 (54%), Gaps = 6/158 (3%)
Query: 158 QEADEIFKKMKET-GLIPNAVAMLDGLCKD----GLIQEAMKLFGLMREKGTIPEVVIYT 212
+ A +FK ++ET L + ++ D + K LI +A+ + L + G +P V+ Y
Sbjct: 114 EYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYN 173
Query: 213 AVVDGFCKAQK-FDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLE 271
AV+D ++++ A+ +F++M + ++PN F+YN+LI+G ++ A+ +M
Sbjct: 174 AVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMET 233
Query: 272 AGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
G PNV T+ L+DG C+ R ++ ++ ++ KG
Sbjct: 234 KGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGL 271
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 92/178 (51%), Gaps = 18/178 (10%)
Query: 157 PQEADEIFKKMKETGLIPN---AVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTA 213
+EA +++++M GL P+ A+++ C +G +++A++L M EKG +P+VV Y+
Sbjct: 501 TKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSV 560
Query: 214 VVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQ-----------GLYK--CNK-- 258
+++G K + +AKR+ K+ P+ +Y+ LI+ L K C K
Sbjct: 561 LINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGM 620
Query: 259 LEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAV 316
+ EA + ML H P+ T + ++ G CR + KA ++ + + GFL++ V
Sbjct: 621 MTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTV 678
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 4/155 (2%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGL-IQEAMKLFGLMREKGTIPEVVIYTAV 214
+A I + G +P + A+LD + I A +F M E P V Y +
Sbjct: 152 KALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNIL 211
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+ GFC A D A +F KM++ G PN +YN LI G K K+++ + M G
Sbjct: 212 IRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGL 271
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
PN+ ++ +++GLCRE +++ V+ + +G+
Sbjct: 272 EPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGY 306
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 4/168 (2%)
Query: 154 SEPPQEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVI 210
S EA + ++M E G+ P+ + +++ G C+ +EA L+ M G P+
Sbjct: 463 SYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFT 522
Query: 211 YTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEML 270
YTA+++ +C + A ++ +M G+ P+ +Y++LI GL K ++ EA +++
Sbjct: 523 YTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLF 582
Query: 271 EAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVRE 318
P+ T+ L++ C + S+I KG + V E
Sbjct: 583 YEESVPSDVTYHTLIEN-CSNIEFKSVVSLIKGFCMKGMMTEADQVFE 629
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 65/138 (47%)
Query: 175 NAVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKM 234
+ V+++ G C G++ EA ++F M K P+ Y ++ G C+A A ++++M
Sbjct: 607 SVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Query: 235 QSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGV 294
+G + + L++ L+K K+ E + +L + LV+ RE +
Sbjct: 667 VKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNM 726
Query: 295 EKAQSVIATLKEKGFLVN 312
+ V+A + + GFL N
Sbjct: 727 DVVLDVLAEMAKDGFLPN 744
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
Query: 210 IYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNK-LEEAVEYCIE 268
++ VV + + D A I Q++G P SYN ++ + + + A E
Sbjct: 136 VFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKE 195
Query: 269 MLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVREFLD 321
MLE+ SPNV T+ L+ G C ++ A ++ ++ KG L N +D
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 88/167 (52%), Gaps = 3/167 (1%)
Query: 158 QEADEIFKKMKETGLIPN---AVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
Q+A + + M+ GL+PN +++D CK G + +A +L M + G VV YTA+
Sbjct: 384 QQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTAL 443
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+DG C A++ +A+ +F KM + G+ PN SYN LI G K ++ A+E E+ G
Sbjct: 444 IDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI 503
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVREFLD 321
P++ + + GLC +E A+ V+ +KE G N +D
Sbjct: 504 KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMD 550
Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 80/161 (49%), Gaps = 3/161 (1%)
Query: 164 FKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCK 220
FK M G P M+D +CK+G ++ A LF M+ +G +P+ V Y +++DGF K
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 221 AQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTT 280
+ DD F +M+ P+ +YN LI K KL +E+ EM G PNV +
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 281 FVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVREFLD 321
+ LVD C+E +++A ++ G + N+ +D
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 410
Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 77/136 (56%), Gaps = 3/136 (2%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+ A +F++MK GL+P+ V +M+DG K G + + + F M++ P+V+ Y A+
Sbjct: 279 EAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNAL 338
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
++ FCK K +R+M+ NG+ PN SY+ L+ K +++A+++ ++M G
Sbjct: 339 INCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGL 398
Query: 275 SPNVTTFVGLVDGLCR 290
PN T+ L+D C+
Sbjct: 399 VPNEYTYTSLIDANCK 414
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 76/147 (51%), Gaps = 3/147 (2%)
Query: 154 SEPPQEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVI 210
+E +EA+E+F KM G+IPN A++ G K + A++L ++ +G P++++
Sbjct: 450 AERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLL 509
Query: 211 YTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEML 270
Y + G C +K + AK + +M+ GI N+ Y L+ +K E + EM
Sbjct: 510 YGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMK 569
Query: 271 EAGHSPNVTTFVGLVDGLCRERGVEKA 297
E V TF L+DGLC+ + V KA
Sbjct: 570 ELDIEVTVVTFCVLIDGLCKNKLVSKA 596
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 171 GLIPNA---VAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDA 227
GL NA AM+DGLCKD ++ A LF M +KG +P+ YT+++DG K +A
Sbjct: 608 GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEA 667
Query: 228 KRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPN 277
+ KM G+ + +Y L+ GL CN+L++A + EM+ G P+
Sbjct: 668 LALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 3/136 (2%)
Query: 158 QEADEIFKKMKETGLIP---NAVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+EA + F KMK + P + +L K G + + F M G P V Y +
Sbjct: 209 EEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIM 268
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+D CK + A+ +F +M+ G+ P+ +YN +I G K +L++ V + EM +
Sbjct: 269 IDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCC 328
Query: 275 SPNVTTFVGLVDGLCR 290
P+V T+ L++ C+
Sbjct: 329 EPDVITYNALINCFCK 344
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%)
Query: 178 AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSN 237
A+ L G+++EA++ F M+ P+ ++ F K K DD KR F+ M
Sbjct: 197 ALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGA 256
Query: 238 GIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGL 288
G P F+YN++I + K +E A EM G P+ T+ ++DG
Sbjct: 257 GARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF 307
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 51/106 (48%)
Query: 205 IPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVE 264
+P ++ A+ ++A + F KM+ + P S N L+ K K ++
Sbjct: 189 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 248
Query: 265 YCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFL 310
+ +M+ AG P V T+ ++D +C+E VE A+ + +K +G +
Sbjct: 249 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLV 294
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 84/152 (55%), Gaps = 3/152 (1%)
Query: 160 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A E+F++M+ G P+ ++D LC G + EA+ + M G V+ Y ++D
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 478
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
GFCKA K +A+ IF +M+ +G++ N+ +YN LI GL K ++E+A + +M+ G P
Sbjct: 479 GFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKP 538
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
+ T+ L+ CR ++KA ++ + G
Sbjct: 539 DKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 3/154 (1%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+EA E+ + + G++P+ +++ GLC + AM+LF MR KG P+ Y +
Sbjct: 382 EEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNML 441
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+D C K D+A + ++M+ +G A + +YN LI G K NK EA E EM G
Sbjct: 442 IDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGV 501
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
S N T+ L+DGLC+ R VE A ++ + +G
Sbjct: 502 SRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 535
Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 86/167 (51%), Gaps = 3/167 (1%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+EA E+ +M PN V ++ LCK+ ++EA +L ++ KG +P+V + ++
Sbjct: 347 KEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSL 406
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+ G C + A +F +M+S G P+ F+YN+LI L KL+EA+ +M +G
Sbjct: 407 IQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC 466
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVREFLD 321
+ +V T+ L+DG C+ +A+ + ++ G N +D
Sbjct: 467 ARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLID 513
Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 72/131 (54%)
Query: 178 AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSN 237
+++GLCK G ++ A+++ +M ++G P+V Y +V+ G CK + +A + +M +
Sbjct: 300 TLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITR 359
Query: 238 GIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKA 297
+PN +YN LI L K N++EEA E + G P+V TF L+ GLC R A
Sbjct: 360 DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVA 419
Query: 298 QSVIATLKEKG 308
+ ++ KG
Sbjct: 420 MELFEEMRSKG 430
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
Query: 178 AMLDGLCKDGLIQEAMKLFGLMR-EKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQS 236
++ G CK+G +++A+ M + G P+ + +V+G CKA A I M
Sbjct: 264 VIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQ 323
Query: 237 NGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEK 296
G P+ ++YN +I GL K +++EAVE +M+ SPN T+ L+ LC+E VE+
Sbjct: 324 EGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEE 383
Query: 297 AQSVIATLKEKGFL 310
A + L KG L
Sbjct: 384 ATELARVLTSKGIL 397
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 81/154 (52%), Gaps = 3/154 (1%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA + K+M+ +G + + ++DG CK +EA ++F M G V Y ++
Sbjct: 453 EALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLI 512
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
DG CK+++ +DA ++ +M G P+ ++YN L+ + +++A + M G
Sbjct: 513 DGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCE 572
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
P++ T+ L+ GLC+ VE A ++ +++ KG
Sbjct: 573 PDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 40/193 (20%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKD---------------------------- 186
+EA+EIF +M+ G+ N+V ++DGLCK
Sbjct: 487 REAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSL 546
Query: 187 -------GLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGI 239
G I++A + M G P++V Y ++ G CKA + + A ++ R +Q GI
Sbjct: 547 LTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606
Query: 240 APNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS-PNVTTFVGLVDGLCRERG-VEKA 297
+YN +IQGL++ K EA+ EMLE + P+ ++ + GLC G + +A
Sbjct: 607 NLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREA 666
Query: 298 QSVIATLKEKGFL 310
+ L EKGF+
Sbjct: 667 VDFLVELLEKGFV 679
Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 3/154 (1%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+ A EI M + G P+ +++ GLCK G ++EA+++ M + P V Y +
Sbjct: 312 KHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTL 371
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+ CK + ++A + R + S GI P+ ++N LIQGL A+E EM G
Sbjct: 372 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGC 431
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
P+ T+ L+D LC + +++A +++ ++ G
Sbjct: 432 EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG 465
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 74/138 (53%), Gaps = 9/138 (6%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
++A +I + M G P+ V ++ GLCK G ++ A KL ++ KG Y V
Sbjct: 557 KKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPV 616
Query: 215 VDGFCKAQKFDDAKRIFRKM-QSNGIAPNAFSYNLLIQGLYKCNK---LEEAVEYCIEML 270
+ G + +K +A +FR+M + N P+A SY ++ +GL CN + EAV++ +E+L
Sbjct: 617 IQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGL--CNGGGPIREAVDFLVELL 674
Query: 271 EAGHSPNVTTFVGLVDGL 288
E G P ++ L +GL
Sbjct: 675 EKGFVPEFSSLYMLAEGL 692
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 76/148 (51%), Gaps = 4/148 (2%)
Query: 166 KMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQ 222
KM G+ P+ ++ LC+ ++ A+ + M G +P+ +T V+ G+ +
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEG 238
Query: 223 KFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEML-EAGHSPNVTTF 281
D A RI +M G + + S N+++ G K ++E+A+ + EM + G P+ TF
Sbjct: 239 DLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTF 298
Query: 282 VGLVDGLCRERGVEKAQSVIATLKEKGF 309
LV+GLC+ V+ A ++ + ++G+
Sbjct: 299 NTLVNGLCKAGHVKHAIEIMDVMLQEGY 326
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 69/189 (36%), Gaps = 37/189 (19%)
Query: 164 FKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLMREKGTI-PEVVIYTAVVDGFCKAQ 222
F L V +LD L A++LF L +K PE +Y ++ ++
Sbjct: 38 FASPHSAALSSTDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSG 97
Query: 223 KFDDAKRIFRKMQSN------------------------------------GIAPNAFSY 246
FDD K+I M+S+ G+ P+ Y
Sbjct: 98 SFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFY 157
Query: 247 NLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKE 306
N ++ L N L+ +M G P+V+TF L+ LCR + A ++ +
Sbjct: 158 NRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPS 217
Query: 307 KGFLVNDKA 315
G + ++K
Sbjct: 218 YGLVPDEKT 226
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 97.8 bits (242), Expect = 1e-19, Method: Composition-based stats.
Identities = 52/154 (33%), Positives = 87/154 (56%), Gaps = 3/154 (1%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+EA +IF +K+ GL+P++V M+ K G I EA+KL M E G P+V++ ++
Sbjct: 485 REAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSL 544
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
++ KA + D+A ++F +M+ + P +YN L+ GL K K++EA+E M++ G
Sbjct: 545 INTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGC 604
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
PN TF L D LC+ V A ++ + + G
Sbjct: 605 PPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG 638
Score = 90.5 bits (223), Expect = 2e-17, Method: Composition-based stats.
Identities = 49/153 (32%), Positives = 80/153 (52%), Gaps = 3/153 (1%)
Query: 163 IFKKMKETGLIPNAVAM---LDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFC 219
+ K+M+ GL PN + L + G I EA ++ M ++G P+VV YT ++D C
Sbjct: 245 LLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALC 304
Query: 220 KAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVT 279
A+K D AK +F KM++ P+ +Y L+ L+ ++ EM + GH P+V
Sbjct: 305 TARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVV 364
Query: 280 TFVGLVDGLCRERGVEKAQSVIATLKEKGFLVN 312
TF LVD LC+ +A + ++++G L N
Sbjct: 365 TFTILVDALCKAGNFGEAFDTLDVMRDQGILPN 397
Score = 85.5 bits (210), Expect = 6e-16, Method: Composition-based stats.
Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 7/161 (4%)
Query: 159 EADE---IFKKMKETGLIPNA---VAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYT 212
EAD +FK+M + G+ P+ ++D LC G + E + F ++E G P+VV Y
Sbjct: 941 EADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYN 1000
Query: 213 AVVDGFCKAQKFDDAKRIFRKMQ-SNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLE 271
+++G K+ + ++A +F +M+ S GI P+ ++YN LI L +EEA + E+
Sbjct: 1001 LIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQR 1060
Query: 272 AGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVN 312
AG PNV TF L+ G E A +V T+ GF N
Sbjct: 1061 AGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101
Score = 83.6 bits (205), Expect = 2e-15, Method: Composition-based stats.
Identities = 48/152 (31%), Positives = 82/152 (53%), Gaps = 3/152 (1%)
Query: 160 ADEIFKKMKETGLIPNAVAM---LDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A E F+KMK G+ PN VA L L K G +EA ++F +++ G +P+ V Y ++
Sbjct: 452 ALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMK 511
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
+ K + D+A ++ +M NG P+ N LI LYK ++++EA + + M E P
Sbjct: 512 CYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP 571
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
V T+ L+ GL + +++A + + +KG
Sbjct: 572 TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG 603
Score = 82.0 bits (201), Expect = 6e-15, Method: Composition-based stats.
Identities = 49/149 (32%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA ++F +MKE L P V +L GL K+G IQEA++LF M +KG P + + +
Sbjct: 556 EAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLF 615
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
D CK + A ++ KM G P+ F+YN +I GL K +++EA+ + +M + +
Sbjct: 616 DCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY- 674
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATL 304
P+ T L+ G+ + +E A +I
Sbjct: 675 PDFVTLCTLLPGVVKASLIEDAYKIITNF 703
Score = 78.6 bits (192), Expect = 7e-14, Method: Composition-based stats.
Identities = 43/148 (29%), Positives = 80/148 (54%), Gaps = 3/148 (2%)
Query: 161 DEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDG 217
D + M + P A ++DGL K G + EA +LF M + G P IY +++G
Sbjct: 876 DLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILING 935
Query: 218 FCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPN 277
F KA + D A +F++M G+ P+ +Y++L+ L +++E + Y E+ E+G +P+
Sbjct: 936 FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPD 995
Query: 278 VTTFVGLVDGLCRERGVEKAQSVIATLK 305
V + +++GL + +E+A + +K
Sbjct: 996 VVCYNLIINGLGKSHRLEEALVLFNEMK 1023
Score = 78.6 bits (192), Expect = 7e-14, Method: Composition-based stats.
Identities = 47/156 (30%), Positives = 74/156 (47%), Gaps = 3/156 (1%)
Query: 160 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A E+F+KMK P+ V +LD + + + + M + G +P+VV +T +VD
Sbjct: 312 AKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVD 371
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
CKA F +A M+ GI PN +YN LI GL + ++L++A+E M G P
Sbjct: 372 ALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKP 431
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVN 312
T++ +D + A +K KG N
Sbjct: 432 TAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPN 467
Score = 77.8 bits (190), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 81/151 (53%), Gaps = 3/151 (1%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
++A +KM+E G + NA + ++ L K EAM+++ M +G P + Y+++
Sbjct: 170 KQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSL 229
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+ G K + D + ++M++ G+ PN +++ + I+ L + K+ EA E M + G
Sbjct: 230 MVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGC 289
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLK 305
P+V T+ L+D LC R ++ A+ V +K
Sbjct: 290 GPDVVTYTVLIDALCTARKLDCAKEVFEKMK 320
Score = 75.9 bits (185), Expect = 4e-13, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 81/151 (53%), Gaps = 3/151 (1%)
Query: 159 EADEIFKKMKETGLIPNA---VAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
+A E+F M+ G+ P A + +D K G A++ F M+ KG P +V A +
Sbjct: 416 DALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASL 475
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
KA + +AK+IF ++ G+ P++ +YN++++ K +++EA++ EM+E G
Sbjct: 476 YSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCE 535
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKE 306
P+V L++ L + V++A + +KE
Sbjct: 536 PDVIVVNSLINTLYKADRVDEAWKMFMRMKE 566
Score = 73.9 bits (180), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/127 (32%), Positives = 70/127 (55%), Gaps = 4/127 (3%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMR-EKGTIPEVVIYTAV 214
E FK++KE+GL P+ V +++GL K ++EA+ LF M+ +G P++ Y ++
Sbjct: 979 EGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSL 1038
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+ A ++A +I+ ++Q G+ PN F++N LI+G K E A M+ G
Sbjct: 1039 ILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGF 1098
Query: 275 SPNVTTF 281
SPN T+
Sbjct: 1099 SPNTGTY 1105
Score = 73.2 bits (178), Expect = 3e-12, Method: Composition-based stats.
Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 4/152 (2%)
Query: 162 EIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLF-GLMREKGTIPEVVIYTAVVDG 217
E++K+M N + ++ GL K G + +A+ L+ LM ++ P Y ++DG
Sbjct: 841 ELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDG 900
Query: 218 FCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPN 277
K+ + +AK++F M G PN YN+LI G K + + A M++ G P+
Sbjct: 901 LSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPD 960
Query: 278 VTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
+ T+ LVD LC V++ LKE G
Sbjct: 961 LKTYSVLVDCLCMVGRVDEGLHYFKELKESGL 992
Score = 72.4 bits (176), Expect = 4e-12, Method: Composition-based stats.
Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 4/176 (2%)
Query: 162 EIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGF 218
+ + +M++ G +P+ V ++D LCK G EA +MR++G +P + Y ++ G
Sbjct: 349 QFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGL 408
Query: 219 CKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNV 278
+ + DDA +F M+S G+ P A++Y + I K A+E +M G +PN+
Sbjct: 409 LRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNI 468
Query: 279 TTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVREFLDKKAPFSSSVWEAI 334
+ L + +A+ + LK+ G LV D + K + EAI
Sbjct: 469 VACNASLYSLAKAGRDREAKQIFYGLKDIG-LVPDSVTYNMMMKCYSKVGEIDEAI 523
Score = 71.2 bits (173), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 77/151 (50%), Gaps = 3/151 (1%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA ++ +M E G P+ + ++++ L K + EA K+F M+E P VV Y ++
Sbjct: 521 EAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLL 580
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
G K K +A +F M G PN ++N L L K +++ A++ +M++ G
Sbjct: 581 AGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCV 640
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKE 306
P+V T+ ++ GL + V++A +K+
Sbjct: 641 PDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK 671
Score = 65.1 bits (157), Expect = 7e-10, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 83/154 (53%), Gaps = 5/154 (3%)
Query: 160 ADEIFKKM-KETGL---IPNAVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
A +F+K K+ G+ +P ++ GL + +I+ A +F ++ G IP+V Y ++
Sbjct: 768 ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLL 827
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVE-YCIEMLEAGH 274
D + K+ K D+ ++++M ++ N ++N++I GL K +++A++ Y M +
Sbjct: 828 DAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDF 887
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
SP T+ L+DGL + + +A+ + + + G
Sbjct: 888 SPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYG 921
Score = 64.7 bits (156), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 3/153 (1%)
Query: 159 EADEIFKKMKETGLIPNA---VAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA E++++M G P+ +++ GL K I M L M G P V +T +
Sbjct: 206 EAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICI 265
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
+A K ++A I ++M G P+ +Y +LI L KL+ A E +M H
Sbjct: 266 RVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHK 325
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
P+ T++ L+D R ++ + + +++ G
Sbjct: 326 PDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDG 358
Score = 58.9 bits (141), Expect = 5e-08, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 3/128 (2%)
Query: 179 MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNG 238
ML+ L DG ++E +F LM+++ + Y + A RKM+ G
Sbjct: 124 MLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFG 183
Query: 239 IAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQ 298
NA+SYN LI L K EA+E M+ G P++ T+ L+ GL + R ++
Sbjct: 184 FVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDID--- 240
Query: 299 SVIATLKE 306
SV+ LKE
Sbjct: 241 SVMGLLKE 248
Score = 46.2 bits (108), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 60/132 (45%)
Query: 177 VAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQS 236
+ + L G +++A MRE G + Y ++ K++ +A ++R+M
Sbjct: 157 LTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMIL 216
Query: 237 NGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEK 296
G P+ +Y+ L+ GL K ++ + EM G PNV TF + L R + +
Sbjct: 217 EGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINE 276
Query: 297 AQSVIATLKEKG 308
A ++ + ++G
Sbjct: 277 AYEILKRMDDEG 288
Score = 44.7 bits (104), Expect = 0.001, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 158 QEADEIFKKMKET-GLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTA 213
+EA +F +MK + G+ P+ +++ L G+++EA K++ ++ G P V + A
Sbjct: 1013 EEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNA 1072
Query: 214 VVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLL 249
++ G+ + K + A +++ M + G +PN +Y L
Sbjct: 1073 LIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 87/158 (55%), Gaps = 3/158 (1%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
EA E++ M + + P+ ++++GLC GL+ EA ++F LM G P VIYT +
Sbjct: 275 MEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTL 334
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+ GFCK+++ +D +IF +M G+ N +Y +LIQG + + A E +M
Sbjct: 335 IHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRA 394
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVN 312
P++ T+ L+DGLC VEKA + ++++ +N
Sbjct: 395 PPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDIN 432
Score = 92.0 bits (227), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 38/197 (19%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA ++F M+ G PN V ++ G CK +++ MK+F M +KG + + YT ++
Sbjct: 311 EARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLI 370
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAP---------------------------------- 241
G+C + D A+ +F +M S P
Sbjct: 371 QGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMD 430
Query: 242 -NAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSV 300
N +Y ++IQG+ K K+E+A + + G PNV T+ ++ G CR + +A S+
Sbjct: 431 INIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSL 490
Query: 301 IATLKEKGFLVNDKAVR 317
+KE GFL N+ +
Sbjct: 491 FKKMKEDGFLPNESVYK 507
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 77/157 (49%), Gaps = 3/157 (1%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
A E+F +M G PN V A++ GLC+ G +A L M ++ P V+ +TA++
Sbjct: 206 HAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALI 265
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
D F K K +AK ++ M + P+ F+Y LI GL L+EA + M G
Sbjct: 266 DAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCY 325
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVN 312
PN + L+ G C+ + VE + + +KG + N
Sbjct: 326 PNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 79/154 (51%), Gaps = 3/154 (1%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
++A +F ++ G PN V ++ LCK+ + A++LF M G+ P VV Y A+
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
V G C+ ++ DA + R M I PN ++ LI K KL EA E M++
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
P+V T+ L++GLC +++A+ + ++ G
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLMERNG 323
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 12/182 (6%)
Query: 153 ISEPPQEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVV 209
+S P A KM + G P+ V ++L+G C I++A+ LF + G P VV
Sbjct: 130 LSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVV 189
Query: 210 IYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEM 269
YT ++ CK + + A +F +M +NG PN +YN L+ GL + + +A +M
Sbjct: 190 TYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDM 249
Query: 270 LEAGHSPNVTTFVGLVDGLCRERGVEKAQ---------SVIATLKEKGFLVNDKAVREFL 320
++ PNV TF L+D + + +A+ SV + G L+N + L
Sbjct: 250 MKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLL 309
Query: 321 DK 322
D+
Sbjct: 310 DE 311
Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 74/145 (51%), Gaps = 3/145 (2%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
+A + + M + + PN + A++D K G + EA +L+ +M + P+V Y +++
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
+G C D+A+++F M+ NG PN Y LI G K ++E+ ++ EM + G
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSV 300
N T+ L+ G C + AQ V
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEV 385
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 67/153 (43%), Gaps = 3/153 (1%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
+A ++F +M + +P+ + +L + K + LF M+ G P + V+
Sbjct: 66 DALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVM 125
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
C + + A KM G P+ ++ L+ G N++E+A+ ++L G
Sbjct: 126 HCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFK 185
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
PNV T+ L+ LC+ R + A + + G
Sbjct: 186 PNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNG 218
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 87/142 (61%), Gaps = 3/142 (2%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
E++++F+ M G+ PN + +++G C G + EAMKL M G P V Y+ ++
Sbjct: 494 ESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI 553
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
+G+CK + +DA +F++M+S+G++P+ +YN+++QGL++ + A E + + E+G
Sbjct: 554 NGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQ 613
Query: 276 PNVTTFVGLVDGLCRERGVEKA 297
++T+ ++ GLC+ + + A
Sbjct: 614 IELSTYNIILHGLCKNKLTDDA 635
Score = 94.7 bits (234), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 110/226 (48%), Gaps = 18/226 (7%)
Query: 88 QQQQRPQQQSFQSPNGPRPKSPDGVQSDENFLDQFKLAIDK--KPGNPQQNESLGQRQEQ 145
QQ P ++ + G KS E+ + F+ ID+ PGN N +
Sbjct: 399 QQGLNPNAVTYGAVIGILCKSG----RVEDAMLYFEQMIDEGLSPGNIVYNSLI------ 448
Query: 146 KPNRNEPISEPPQEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREK 202
+ A+E+ +M + G+ N + +++D CK+G + E+ KLF LM
Sbjct: 449 ---HGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRI 505
Query: 203 GTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEA 262
G P V+ Y +++G+C A K D+A ++ M S G+ PN +Y+ LI G K +++E+A
Sbjct: 506 GVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDA 565
Query: 263 VEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
+ EM +G SP++ T+ ++ GL + R A+ + + E G
Sbjct: 566 LVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611
Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 38/206 (18%)
Query: 154 SEPPQEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVI 210
S P+EA KKM+ G+ P+ V ++D LCK+G EA K+F M ++G PE+
Sbjct: 279 SGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITT 338
Query: 211 YTAVVDGFC-----------------------------------KAQKFDDAKRIFRKMQ 235
Y ++ G+ K K D A +F KM+
Sbjct: 339 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMR 398
Query: 236 SNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVE 295
G+ PNA +Y +I L K ++E+A+ Y +M++ G SP + L+ GLC E
Sbjct: 399 QQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWE 458
Query: 296 KAQSVIATLKEKGFLVNDKAVREFLD 321
+A+ +I + ++G +N +D
Sbjct: 459 RAEELILEMLDRGICLNTIFFNSIID 484
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 159 EADEIFKKMKETGLIPNAVAMLDGLC---KDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
E + M G+ P+ +C K G + +AM +F MR++G P V Y AV+
Sbjct: 354 EMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVI 413
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
CK+ + +DA F +M G++P YN LI GL CNK E A E +EML+ G
Sbjct: 414 GILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGIC 473
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
N F ++D C+E V +++ + + G
Sbjct: 474 LNTIFFNSIIDSHCKEGRVIESEKLFELMVRIG 506
Score = 81.6 bits (200), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 87/190 (45%), Gaps = 41/190 (21%)
Query: 161 DEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLM---REKGTIPEVVIYTAV 214
D + ++M E G IPN + +L GLC + QEA++L +M R G+ P+VV YT V
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202
Query: 215 VDGF-----------------------------------CKAQKFDDAKRIFRKMQSNGI 239
++GF CKAQ D A + M NG+
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262
Query: 240 APNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQS 299
P+ +YN ++ G + +EA+ + +M G P+V T+ L+D LC+ +A+
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 322
Query: 300 VIATLKEKGF 309
+ ++ ++G
Sbjct: 323 IFDSMTKRGL 332
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 38/188 (20%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
+A +F KM++ GL PNAV A++ LCK G +++AM F M ++G P ++Y +++
Sbjct: 389 QAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLI 448
Query: 216 DGFCKAQKFDDA-----------------------------------KRIFRKMQSNGIA 240
G C K++ A +++F M G+
Sbjct: 449 HGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVK 508
Query: 241 PNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSV 300
PN +YN LI G K++EA++ M+ G PN T+ L++G C+ +E A +
Sbjct: 509 PNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVL 568
Query: 301 IATLKEKG 308
++ G
Sbjct: 569 FKEMESSG 576
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 82/154 (53%), Gaps = 3/154 (1%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
+A + +M + G++P+ V +++ LCK + +AM++ M + G +P+ + Y +++
Sbjct: 214 KAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSIL 273
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
G+C + + +A +KM+S+G+ P+ +Y+LL+ L K + EA + M + G
Sbjct: 274 HGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLK 333
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
P +TT+ L+ G + + + ++ + G
Sbjct: 334 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 367
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 3/159 (1%)
Query: 154 SEPPQEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVI 210
++ +A E+ M + G++P+ + ++L G C G +EA+ MR G P+VV
Sbjct: 244 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVT 303
Query: 211 YTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEML 270
Y+ ++D CK + +A++IF M G+ P +Y L+QG L E M+
Sbjct: 304 YSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 363
Query: 271 EAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
G P+ F L+ ++ V++A V + ++++G
Sbjct: 364 RNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 402
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 7/147 (4%)
Query: 171 GLIPNAVA---MLDGLCKDGLIQEAMKL-FGLMREKGTIPEVVIYTAVVDGFCKAQKFDD 226
G +A+A +L GLC D +AM + M E G IP V Y ++ G C + +
Sbjct: 117 GFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQE 176
Query: 227 AKRIFRKM---QSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVG 283
A + M + G P+ SY +I G +K ++A EML+ G P+V T+
Sbjct: 177 ALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNS 236
Query: 284 LVDGLCRERGVEKAQSVIATLKEKGFL 310
++ LC+ + ++KA V+ T+ + G +
Sbjct: 237 IIAALCKAQAMDKAMEVLNTMVKNGVM 263
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Query: 160 ADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFC 219
ADE+ + G++ C+ G + G + +KG + + +T ++ G C
Sbjct: 80 ADEVTPDLCTYGILIGCC------CRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLC 133
Query: 220 KAQKFDDAKRI-FRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLE---AGHS 275
++ DA I R+M G PN FSYN+L++GL N+ +EA+E M + G
Sbjct: 134 ADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSP 193
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFL 310
P+V ++ +++G +E +KA S + ++G L
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGIL 228
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 83/169 (49%), Gaps = 11/169 (6%)
Query: 160 ADEIFKKMKETGL---IPNAVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A E++ ++ E+G + +L GLCK+ L +A+++F + E + ++D
Sbjct: 600 AKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMID 659
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
K + D+AK +F SNG+ PN ++Y L+ + + LEE + + M + G
Sbjct: 660 ALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG--- 716
Query: 277 NVTTFVGLVDGLCRE---RG-VEKAQSVIATLKEKGFLVNDKAVREFLD 321
T G+++ + RE RG + +A + ++ + EK F + F+D
Sbjct: 717 -CTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 764
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 92/188 (48%), Gaps = 7/188 (3%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
++A +FK+M+ +G+ P+ + +L GL + A +L+ + E GT E+ Y +
Sbjct: 563 EDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNII 622
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+ G CK + DDA ++F+ + + A ++N++I L K + +EA + + G
Sbjct: 623 LHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGL 682
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKA----VREFLDKKAPFSSSV 330
PN T+ + + + + +E+ + ++++ G V+ VRE L + +
Sbjct: 683 VPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGT 742
Query: 331 WEAIFGKK 338
+ ++ +K
Sbjct: 743 YLSMIDEK 750
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 96.7 bits (239), Expect = 2e-19, Method: Composition-based stats.
Identities = 51/156 (32%), Positives = 84/156 (53%), Gaps = 3/156 (1%)
Query: 160 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A ++ +M GL PN V A++DG +G +EA+K+F +M KG P V Y ++D
Sbjct: 317 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLD 376
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
G CK +FD A+ + +M+ NG+ +Y +I GL K L+EAV EM + G P
Sbjct: 377 GLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDP 436
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVN 312
++ T+ L++G C+ + A+ ++ + G N
Sbjct: 437 DIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPN 472
Score = 94.4 bits (233), Expect = 1e-18, Method: Composition-based stats.
Identities = 51/156 (32%), Positives = 83/156 (53%), Gaps = 3/156 (1%)
Query: 160 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A + +MK G+ + M+DGLCK+G + EA+ L M + G P++V Y+A+++
Sbjct: 387 ARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALIN 446
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
GFCK +F AK I ++ G++PN Y+ LI + L+EA+ M+ GH+
Sbjct: 447 GFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR 506
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVN 312
+ TF LV LC+ V +A+ + + G L N
Sbjct: 507 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPN 542
Score = 80.1 bits (196), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 3/136 (2%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+EA ++F M+ GL P+ V+ +LDGLCK+ A + M+ G + YT +
Sbjct: 350 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 409
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+DG CK D+A + +M +GI P+ +Y+ LI G K + + A E + G
Sbjct: 410 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 469
Query: 275 SPNVTTFVGLVDGLCR 290
SPN + L+ CR
Sbjct: 470 SPNGIIYSTLIYNCCR 485
Score = 79.3 bits (194), Expect = 4e-14, Method: Composition-based stats.
Identities = 50/175 (28%), Positives = 83/175 (47%), Gaps = 6/175 (3%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+++ + +KM+++G P V +L CK G + A++L M+ KG +V Y +
Sbjct: 210 EKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNML 269
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+ C++ + + R M+ I PN +YN LI G K+ A + EML G
Sbjct: 270 IHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGL 329
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVREFLD---KKAPF 326
SPN TF L+DG E ++A + ++ KG ++ + LD K A F
Sbjct: 330 SPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEF 384
Score = 77.0 bits (188), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 76/150 (50%), Gaps = 3/150 (2%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+ A EI ++ GL PN + ++ C+ G ++EA++++ M +G + + +
Sbjct: 455 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVL 514
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
V CKA K +A+ R M S+GI PN S++ LI G + +A EM + GH
Sbjct: 515 VTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH 574
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATL 304
P T+ L+ GLC+ + +A+ + +L
Sbjct: 575 HPTFFTYGSLLKGLCKGGHLREAEKFLKSL 604
Score = 70.1 bits (170), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 76/149 (51%), Gaps = 3/149 (2%)
Query: 163 IFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFC 219
+ + M++ + PN V +++G +G + A +L M G P V + A++DG
Sbjct: 285 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 344
Query: 220 KAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVT 279
F +A ++F M++ G+ P+ SY +L+ GL K + + A + + M G
Sbjct: 345 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 404
Query: 280 TFVGLVDGLCRERGVEKAQSVIATLKEKG 308
T+ G++DGLC+ +++A ++ + + G
Sbjct: 405 TYTGMIDGLCKNGFLDEAVVLLNEMSKDG 433
Score = 64.7 bits (156), Expect = 9e-10, Method: Composition-based stats.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA + +M + G+ P+ V A+++G CK G + A ++ + G P +IY+ ++
Sbjct: 421 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 480
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
C+ +A RI+ M G + F++N+L+ L K K+ EA E+ M G
Sbjct: 481 YNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 540
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
PN +F L++G KA SV + + G
Sbjct: 541 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 573
Score = 63.2 bits (152), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/185 (22%), Positives = 79/185 (42%), Gaps = 39/185 (21%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMK--------------------- 194
+A +F +M + G P ++L GLCK G ++EA K
Sbjct: 561 KAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLL 620
Query: 195 --------------LFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNG-I 239
LFG M ++ +P+ YT+++ G C+ K A ++ ++ G +
Sbjct: 621 TAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNV 680
Query: 240 APNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQS 299
PN Y + G++K + + + + +M GH+P++ T ++DG R +EK
Sbjct: 681 LPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTND 740
Query: 300 VIATL 304
++ +
Sbjct: 741 LLPEM 745
Score = 60.5 bits (145), Expect = 2e-08, Method: Composition-based stats.
Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 11/189 (5%)
Query: 148 NRNEPISEPPQEADEIFKKMKETGLIPNA---VAMLDGLCKDGLIQEAMKLFGLMREKGT 204
NRN QE+ + +M + G+ P + + +++GLC+ G I+ A + M
Sbjct: 870 NRNHRF----QESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKI 925
Query: 205 IPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVE 264
P V +A+V K K D+A + R M + P S+ L+ K + EA+E
Sbjct: 926 CPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALE 985
Query: 265 YCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKA----VREFL 320
+ M G ++ ++ L+ GLC + + A + +K GFL N +R L
Sbjct: 986 LRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLL 1045
Query: 321 DKKAPFSSS 329
++ FS +
Sbjct: 1046 ARETAFSGA 1054
Score = 60.1 bits (144), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/153 (22%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
Q++ EIF+ M G P+ A+L + K G M ++ P+V + +
Sbjct: 140 QDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNIL 199
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
++ C F+ + + +KM+ +G AP +YN ++ K + + A+E M G
Sbjct: 200 INVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGV 259
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEK 307
+V T+ L+ LCR + K ++ ++++
Sbjct: 260 DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKR 292
Score = 56.6 bits (135), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 69/143 (48%), Gaps = 4/143 (2%)
Query: 159 EADEIFKKMKETGLIPNA---VAMLDGLCKDGLIQEAMKLFGLMREKGTI-PEVVIYTAV 214
+A +F +M + ++P++ +++ GLC+ G A+ +G + P V+YT
Sbjct: 631 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCF 690
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
VDG KA ++ +M + G P+ + N +I G + K+E+ + EM
Sbjct: 691 VDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNG 750
Query: 275 SPNVTTFVGLVDGLCRERGVEKA 297
PN+TT+ L+ G + + V +
Sbjct: 751 GPNLTTYNILLHGYSKRKDVSTS 773
Score = 55.8 bits (133), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 62/132 (46%)
Query: 179 MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNG 238
++ LCK G + EA + M G +P V + +++G+ + + A +F +M G
Sbjct: 514 LVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 573
Query: 239 IAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQ 298
P F+Y L++GL K L EA ++ + + + + L+ +C+ + KA
Sbjct: 574 HHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAV 633
Query: 299 SVIATLKEKGFL 310
S+ + ++ L
Sbjct: 634 SLFGEMVQRSIL 645
Score = 50.4 bits (119), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 63/124 (50%)
Query: 185 KDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAF 244
++G+IQ+++++F LM G P V A++ K+ + ++M I P+
Sbjct: 135 REGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVA 194
Query: 245 SYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATL 304
++N+LI L E++ +M ++G++P + T+ ++ C++ + A ++ +
Sbjct: 195 TFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM 254
Query: 305 KEKG 308
K KG
Sbjct: 255 KSKG 258
Score = 50.1 bits (118), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 57/120 (47%)
Query: 178 AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSN 237
AM+ L ++ QE+ + M ++G PE Y +++G C+ A + +M ++
Sbjct: 864 AMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAH 923
Query: 238 GIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKA 297
I P + + +++ L KC K +EA ML+ P + +F L+ C+ V +A
Sbjct: 924 KICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEA 983
Score = 48.9 bits (115), Expect = 5e-05, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 67/155 (43%), Gaps = 5/155 (3%)
Query: 163 IFKKMKET--GLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDG 217
+F K E ++PN V +DG+ K G + + M G P++V A++DG
Sbjct: 669 LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 728
Query: 218 FCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPN 277
+ + K + + +M + PN +YN+L+ G K + + ++ G P+
Sbjct: 729 YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 788
Query: 278 VTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVN 312
T LV G+C +E ++ +G V+
Sbjct: 789 KLTCHSLVLGICESNMLEIGLKILKAFICRGVEVD 823
Score = 46.6 bits (109), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 59/124 (47%), Gaps = 3/124 (2%)
Query: 210 IYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEM 269
+Y ++ + + D+ IFR M G P+ ++ N ++ + K + + EM
Sbjct: 125 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 184
Query: 270 LEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF---LVNDKAVREFLDKKAPF 326
L+ P+V TF L++ LC E EK+ ++ +++ G+ +V V + KK F
Sbjct: 185 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 244
Query: 327 SSSV 330
+++
Sbjct: 245 KAAI 248
Score = 45.8 bits (107), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 71/138 (51%), Gaps = 3/138 (2%)
Query: 163 IFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFC 219
+++ + G++P+ + +++ G+C+ +++ +K+ +G + + ++ C
Sbjct: 776 LYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCC 835
Query: 220 KAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVT 279
+ + A + + M S GI+ + + + ++ L + ++ +E+ EM + G SP
Sbjct: 836 ANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESR 895
Query: 280 TFVGLVDGLCRERGVEKA 297
++GL++GLCR ++ A
Sbjct: 896 KYIGLINGLCRVGDIKTA 913
Score = 45.4 bits (106), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 65/147 (44%), Gaps = 3/147 (2%)
Query: 165 KKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKA 221
++M G P+ V AM+DG + G I++ L M + P + Y ++ G+ K
Sbjct: 708 EQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKR 767
Query: 222 QKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTF 281
+ + ++R + NGI P+ + + L+ G+ + N LE ++ + G + TF
Sbjct: 768 KDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTF 827
Query: 282 VGLVDGLCRERGVEKAQSVIATLKEKG 308
L+ C + A ++ + G
Sbjct: 828 NMLISKCCANGEINWAFDLVKVMTSLG 854
Score = 35.0 bits (79), Expect = 0.73, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 41/92 (44%)
Query: 179 MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNG 238
++ C +G I A L +M G + A+V + +F +++ + +M G
Sbjct: 830 LISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQG 889
Query: 239 IAPNAFSYNLLIQGLYKCNKLEEAVEYCIEML 270
I+P + Y LI GL + ++ A EM+
Sbjct: 890 ISPESRKYIGLINGLCRVGDIKTAFVVKEEMI 921
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 87/165 (52%), Gaps = 19/165 (11%)
Query: 163 IFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFC 219
+F++MK GL+ + M+D CK GLI++A K F MRE G P VV YTA++ +
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 564
Query: 220 KAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVE----YC-------IE 268
KA+K A +F M S G PN +Y+ LI G K ++E+A + C ++
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVD 624
Query: 269 ML-----EAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
M + PNV T+ L+DG C+ VE+A+ ++ + +G
Sbjct: 625 MYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG 669
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 84/153 (54%), Gaps = 3/153 (1%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
+ D FK+ + PN V A+LDG CK ++EA KL M +G P ++Y A++
Sbjct: 622 DVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 681
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
DG CK K D+A+ + +M +G ++Y+ LI +K + + A + +MLE +
Sbjct: 682 DGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA 741
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
PNV + ++DGLC+ ++A ++ ++EKG
Sbjct: 742 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 774
Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 74/143 (51%), Gaps = 3/143 (2%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
++A + ++M G IP+ +L+ LC ++ A LF M+ G + +V YT +
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
VD FCKA + A++ F +M+ G PN +Y LI K K+ A E ML G
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584
Query: 275 SPNVTTFVGLVDGLCRERGVEKA 297
PN+ T+ L+DG C+ VEKA
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKA 607
Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 3/171 (1%)
Query: 154 SEPPQEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVI 210
S +EA ++ M G PN + A++DGLCK G + EA ++ M E G +
Sbjct: 652 SHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYT 711
Query: 211 YTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEML 270
Y++++D + K ++ D A ++ KM N APN Y +I GL K K +EA + M
Sbjct: 712 YSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMME 771
Query: 271 EAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVREFLD 321
E G PNV T+ ++DG +E ++ + KG N R +D
Sbjct: 772 EKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 822
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 64/123 (52%), Gaps = 4/123 (3%)
Query: 160 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A ++ KM E PN V M+DGLCK G EA KL +M EKG P VV YTA++D
Sbjct: 728 ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 787
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
GF K + + +M S G+APN +Y +LI K L+ A +E ++ H P
Sbjct: 788 GFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVA-HNLLEEMKQTHWP 846
Query: 277 NVT 279
T
Sbjct: 847 THT 849
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 6/195 (3%)
Query: 130 PGNPQQNESLGQRQEQKPNRNEPISEPPQEADEIFKKMKETGLIPNAV---AMLDGLCKD 186
PG N +G K + N + + ++A + +M G++ N + + LC
Sbjct: 405 PGYVVYNILIGSICGDKDSLNCDLLDLAEKA---YSEMLAAGVVLNKINVSSFTRCLCSA 461
Query: 187 GLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSY 246
G ++A + M +G IP+ Y+ V++ C A K + A +F +M+ G+ + ++Y
Sbjct: 462 GKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTY 521
Query: 247 NLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKE 306
+++ K +E+A ++ EM E G +PNV T+ L+ + + V A + T+
Sbjct: 522 TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLS 581
Query: 307 KGFLVNDKAVREFLD 321
+G L N +D
Sbjct: 582 EGCLPNIVTYSALID 596
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 70/162 (43%), Gaps = 9/162 (5%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+EA + +M+ T +PN V +L G + ++ +M +G P I+ ++
Sbjct: 319 EEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSL 378
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGL------YKCNKLEEAVEYCIE 268
V +C + A ++ +KM G P YN+LI + C+ L+ A + E
Sbjct: 379 VHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSE 438
Query: 269 MLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFL 310
ML AG N LC EKA SVI + +GF+
Sbjct: 439 MLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFI 480
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 87/195 (44%), Gaps = 14/195 (7%)
Query: 160 ADEIFKKMKETGLIPNAVA---MLDGLCKD------GLIQEAMKLFGLMREKGTIPEVVI 210
A ++ KKM + G +P V ++ +C D L+ A K + M G + +
Sbjct: 391 AYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKIN 450
Query: 211 YTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEML 270
++ C A K++ A + R+M G P+ +Y+ ++ L +K+E A EM
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 510
Query: 271 EAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG----FLVNDKAVREFLD-KKAP 325
G +V T+ +VD C+ +E+A+ ++E G + + +L KK
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS 570
Query: 326 FSSSVWEAIFGKKTL 340
+++ ++E + + L
Sbjct: 571 YANELFETMLSEGCL 585
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 67/157 (42%), Gaps = 9/157 (5%)
Query: 172 LIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAK 228
+P+ V ++ GLC+ L +EAM MR +P VV Y+ ++ G ++ K
Sbjct: 298 FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCK 357
Query: 229 RIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGL 288
R+ M G P+ +N L+ A + +M++ GH P + L+ +
Sbjct: 358 RVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI 417
Query: 289 CRERG------VEKAQSVIATLKEKGFLVNDKAVREF 319
C ++ ++ A+ + + G ++N V F
Sbjct: 418 CGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSF 454
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 76/190 (40%), Gaps = 38/190 (20%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA ++ + M+E G PN V AM+DG G I+ ++L M KG P V Y ++
Sbjct: 762 EAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI 821
Query: 216 DGFCKAQKFDDAKRIFRKM------------------------QSNGI---------APN 242
D CK D A + +M +S G+ AP
Sbjct: 822 DHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPF 881
Query: 243 AFSYNLLIQGLYKCNKLEEAVEYC--IEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSV 300
Y LLI L K +LE A+ + A +T+ L++ LC VE A +
Sbjct: 882 LSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQL 941
Query: 301 IATLKEKGFL 310
+ + +KG +
Sbjct: 942 FSEMTKKGVI 951
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 38/174 (21%)
Query: 162 EIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLF---------------------- 196
E+ ++M G+ PN V ++D CK+G + A L
Sbjct: 800 ELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF 859
Query: 197 --------GLMREKG---TIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQ--SNGIAPNA 243
GL+ E G T P + +Y ++D KAQ+ + A R+ ++ S + +
Sbjct: 860 NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYS 919
Query: 244 FSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKA 297
+YN LI+ L NK+E A + EM + G P + +F L+ GL R + +A
Sbjct: 920 STYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Query: 179 MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVI-----YTAVVDGFCKAQKFDDAKRIFRK 233
++D L K ++ A++L + E T ++ Y ++++ C A K + A ++F +
Sbjct: 888 LIDNLIKAQRLEMALRL---LEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSE 944
Query: 234 MQSNGIAPNAFSYNLLIQGLYKCNKLEEAV 263
M G+ P S+ LI+GL++ +K+ EA+
Sbjct: 945 MTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 80/142 (56%), Gaps = 3/142 (2%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA E++K+M ++ + PN V ++++GLC G + +A K F LM KG P VV Y ++
Sbjct: 264 EAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLI 323
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
GFCK + D+ ++F++M G + F+YN LI G + KL A++ M+ +
Sbjct: 324 SGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVT 383
Query: 276 PNVTTFVGLVDGLCRERGVEKA 297
P++ T L+ GLC +E A
Sbjct: 384 PDIITHCILLHGLCVNGEIESA 405
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 79/153 (51%), Gaps = 3/153 (1%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
+A + M ++G PN V ++DGLCK+G + A++L M +KG +VV Y ++
Sbjct: 159 DAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLL 218
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
G C + ++ DA R+ R M I P+ ++ LI K L+EA E EM+++
Sbjct: 219 TGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVD 278
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
PN T+ +++GLC + A+ + KG
Sbjct: 279 PNNVTYNSIINGLCMHGRLYDAKKTFDLMASKG 311
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 82/153 (53%), Gaps = 3/153 (1%)
Query: 160 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A E+ +M++ GL + V +L GLC G +A ++ M ++ P+VV +TA++D
Sbjct: 195 ALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALID 254
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
F K D+A+ ++++M + + PN +YN +I GL +L +A + M G P
Sbjct: 255 VFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFP 314
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
NV T+ L+ G C+ R V++ + + +GF
Sbjct: 315 NVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 3/144 (2%)
Query: 160 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A + KM + G P+ V ++L G C I +A L LM + G P VV+Y ++D
Sbjct: 125 ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLID 184
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
G CK + + A + +M+ G+ + +YN L+ GL + +A +M++ +P
Sbjct: 185 GLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINP 244
Query: 277 NVTTFVGLVDGLCRERGVEKAQSV 300
+V TF L+D ++ +++AQ +
Sbjct: 245 DVVTFTALIDVFVKQGNLDEAQEL 268
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 86/205 (41%), Gaps = 38/205 (18%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
+A + F M G PN V ++ G CK ++ E MKLF M +G ++ Y ++
Sbjct: 299 DAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI 358
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFS------------------------------ 245
G+C+ K A IF M S + P+ +
Sbjct: 359 HGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKY 418
Query: 246 -----YNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSV 300
YN++I GL K +K+E+A E + G P+ T+ ++ GLC+ +A +
Sbjct: 419 IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADEL 478
Query: 301 IATLKEKGFLVNDKAVREFLDKKAP 325
I +KE+G + A + L++ +
Sbjct: 479 IRRMKEEGIICQMNAEDDHLEEHSS 503
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 3/136 (2%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+A + + M + + P+ V A++D K G + EA +L+ M + P V Y ++
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
++G C + DAK+ F M S G PN +YN LI G K ++E ++ M G
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Query: 275 SPNVTTFVGLVDGLCR 290
+ ++ T+ L+ G C+
Sbjct: 348 NADIFTYNTLIHGYCQ 363
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 3/128 (2%)
Query: 165 KKMKETGL---IPNAVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKA 221
+KM+ G+ + + ++ C+ + A+ + G M + G P +V + +++ GFC
Sbjct: 95 QKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLV 154
Query: 222 QKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTF 281
+ DA + M +G PN YN LI GL K +L A+E EM + G +V T+
Sbjct: 155 NRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTY 214
Query: 282 VGLVDGLC 289
L+ GLC
Sbjct: 215 NTLLTGLC 222
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 56/111 (50%)
Query: 199 MREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNK 258
M G ++ +T ++ FC+ + A + KM G P+ ++ L+ G N+
Sbjct: 97 MELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNR 156
Query: 259 LEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
+ +A I M+++G+ PNV + L+DGLC+ + A ++ +++KG
Sbjct: 157 IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGL 207
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 63/120 (52%)
Query: 190 QEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLL 249
++A LF M +P +V +T ++ ++++ +KM+ GI+ + +S+ +L
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 250 IQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
I +C++L A+ +M++ G+ P++ TF L+ G C + A S++ + + G+
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 91/161 (56%), Gaps = 5/161 (3%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA ++ +M E GLIP +++GLCK G + +A L +M KG P++ + ++
Sbjct: 409 EAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
G+ K ++A I M NG+ P+ ++YN L+ GL K +K E+ +E M+E G +
Sbjct: 469 HGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCA 528
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAV 316
PN+ TF L++ LCR R +++A ++ +K K VN AV
Sbjct: 529 PNLFTFNILLESLCRYRKLDEALGLLEEMKNKS--VNPDAV 567
Score = 91.7 bits (226), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 80/152 (52%), Gaps = 3/152 (1%)
Query: 160 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A +F + G+ PN + ++ GL G+I EA +L M EKG IPEV + +V+
Sbjct: 375 ALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVN 434
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
G CK DA + + M S G P+ F++N+LI G K+E A+E ML+ G P
Sbjct: 435 GLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDP 494
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
+V T+ L++GLC+ E T+ EKG
Sbjct: 495 DVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG 526
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 79/156 (50%), Gaps = 3/156 (1%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
QEA+ KM GL P++ ++ G CK G++Q A ++ G G +P+ Y ++
Sbjct: 303 QEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSL 362
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+DG C + + A +F + GI PN YN LI+GL + EA + EM E G
Sbjct: 363 IDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGL 422
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFL 310
P V TF LV+GLC+ V A ++ + KG+
Sbjct: 423 IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYF 458
Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 81/152 (53%), Gaps = 3/152 (1%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+AD + K M G P+ ++ G ++ A+++ +M + G P+V Y ++
Sbjct: 443 SDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSL 502
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
++G CK KF+D ++ M G APN F++N+L++ L + KL+EA+ EM
Sbjct: 503 LNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSV 562
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKE 306
+P+ TF L+DG C+ ++ A ++ ++E
Sbjct: 563 NPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEE 594
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 83/155 (53%), Gaps = 3/155 (1%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+E +++ K+ + G++PN + GLC+ G + A+++ G + E+G P+V+ Y +
Sbjct: 233 KECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNL 292
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+ G CK KF +A+ KM + G+ P++++YN LI G K ++ A + + G
Sbjct: 293 IYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGF 352
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
P+ T+ L+DGLC E +A ++ KG
Sbjct: 353 VPDQFTYRSLIDGLCHEGETNRALALFNEALGKGI 387
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 98/232 (42%), Gaps = 54/232 (23%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
++ E +K M E G PN +L+ LC+ + EA+ L M+ K P+ V + +
Sbjct: 513 EDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTL 572
Query: 215 VDGFCKAQKFDDAKRIFRKMQ------------------------------------SNG 238
+DGFCK D A +FRKM+
Sbjct: 573 IDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRC 632
Query: 239 IAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQ 298
+ P+ ++Y L++ G K + ++ +EM+E G P++TT +++ LC E V +A
Sbjct: 633 LGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAA 692
Query: 299 SVIATLKEKGFL---VND------------KAVREFLDKKAPFSSSVWEAIF 335
+I + +KG + VN K V E L KK+ + +E +F
Sbjct: 693 GIIHRMVQKGLVPEAVNTICDVDKKEVAAPKLVLEDLLKKSCITYYAYELLF 744
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 3/166 (1%)
Query: 159 EADEIFKKMKETGL---IPNAVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
E E+F KM +G+ + +L LCK G ++E KL + ++G +P + Y +
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI 258
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
G C+ + D A R+ + G P+ +YN LI GL K +K +EA Y +M+ G
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLE 318
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVREFLD 321
P+ T+ L+ G C+ V+ A+ ++ GF+ + R +D
Sbjct: 319 PDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLID 364
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 3/156 (1%)
Query: 157 PQEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTA 213
P A + M G N VA ++ G ++ E +LFG M G + +
Sbjct: 162 PHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNK 221
Query: 214 VVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAG 273
++ CK + +++ K+ G+ PN F+YNL IQGL + +L+ AV ++E G
Sbjct: 222 LLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQG 281
Query: 274 HSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
P+V T+ L+ GLC+ ++A+ + + +G
Sbjct: 282 PKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL 317
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 79/158 (50%), Gaps = 3/158 (1%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
QEA +F++M P A++ L G +A K++ MR++G P+V +T
Sbjct: 93 QEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIR 152
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+ FCK + A R+ M S G N +Y ++ G Y+ N E E +ML +G
Sbjct: 153 MKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGV 212
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVN 312
S ++TF L+ LC++ V++ + ++ + ++G L N
Sbjct: 213 SLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPN 250
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 185 KDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAF 244
+ G +QEA+ +F M P V Y A++ + FD A +++ +M+ GI P+ +
Sbjct: 88 RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVY 147
Query: 245 SYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRE 291
S+ + ++ K ++ A+ M G NV + +V G E
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEE 194
Score = 35.8 bits (81), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 70/164 (42%), Gaps = 5/164 (3%)
Query: 157 PQEADEIFKKM-KETGL---IPNAVAMLDGLCKDGLIQEAMKLFGLMREK-GTIPEVVIY 211
P +A E+F M KE G + ++++ L G + ++ MRE G +Y
Sbjct: 20 PMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVY 79
Query: 212 TAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLE 271
+ + + K +A +F +M P FSYN ++ L ++A + + M +
Sbjct: 80 VGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRD 139
Query: 272 AGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKA 315
G +P+V +F + C+ A ++ + +G +N A
Sbjct: 140 RGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVA 183
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 87/154 (56%), Gaps = 3/154 (1%)
Query: 159 EADEIFKKMKETGLIPN---AVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
+A + M+E G N ++ GL K+G +EAM L+ M EKG P +V+Y+ +V
Sbjct: 345 DAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLV 404
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
DG C+ K ++AK I +M ++G PNA++Y+ L++G +K EEAV+ EM + G S
Sbjct: 405 DGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCS 464
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
N + L+DGLC V++A V + + G
Sbjct: 465 RNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGI 498
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 92/180 (51%), Gaps = 8/180 (4%)
Query: 160 ADEIFKKMKETGLIPNA---VAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A E+F+ M E +P+ ++DGLCK+ I EA+ L M+ +G P VIY ++D
Sbjct: 206 AIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLID 265
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
G CK ++ M G PN +YN LI GL KL++AV M+ + P
Sbjct: 266 GLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIP 325
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVREFL-----DKKAPFSSSVW 331
N T+ L++GL ++R A ++++++E+G+ +N + + KA + S+W
Sbjct: 326 NDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLW 385
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 89/158 (56%), Gaps = 6/158 (3%)
Query: 157 PQEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTA 213
P EA EI +M +G +PNA +++ G K GL +EA++++ M + G Y+
Sbjct: 413 PNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSV 472
Query: 214 VVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEML--- 270
++DG C + +A ++ KM + GI P+ +Y+ +I+GL ++ A++ EML
Sbjct: 473 LIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQE 532
Query: 271 EAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
E P+V T+ L+DGLC ++ + +A ++ ++ ++G
Sbjct: 533 EPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRG 570
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 82/163 (50%), Gaps = 7/163 (4%)
Query: 153 ISEPPQEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVV 209
++ + D +F K G +PN V ++ GLC G + +A+ L M IP V
Sbjct: 273 LTRVTKLVDNMFLK----GCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDV 328
Query: 210 IYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEM 269
Y +++G K ++ DA R+ M+ G N Y++LI GL+K K EEA+ +M
Sbjct: 329 TYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKM 388
Query: 270 LEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVN 312
E G PN+ + LVDGLCRE +A+ ++ + G L N
Sbjct: 389 AEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPN 431
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 76/135 (56%), Gaps = 3/135 (2%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+EA +++KM E G PN V ++DGLC++G EA ++ M G +P Y+++
Sbjct: 379 EEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSL 438
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+ GF K ++A +++++M G + N F Y++LI GL +++EA+ +ML G
Sbjct: 439 MKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGI 498
Query: 275 SPNVTTFVGLVDGLC 289
P+ + ++ GLC
Sbjct: 499 KPDTVAYSSIIKGLC 513
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 75/157 (47%), Gaps = 3/157 (1%)
Query: 155 EPPQEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIY 211
E EA + +M+ G P+ V ++DGLCK G + KL M KG +P V Y
Sbjct: 236 ERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTY 295
Query: 212 TAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLE 271
++ G C K D A + +M S+ PN +Y LI GL K + +AV M E
Sbjct: 296 NTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEE 355
Query: 272 AGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
G+ N + L+ GL +E E+A S+ + EKG
Sbjct: 356 RGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKG 392
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 75/143 (52%), Gaps = 3/143 (2%)
Query: 174 PNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRI 230
PN ++ ++ LCK + A+++F M E+ +P+ Y ++DG CK ++ D+A +
Sbjct: 185 PNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLL 244
Query: 231 FRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCR 290
+MQS G +P+ YN+LI GL K L + M G PN T+ L+ GLC
Sbjct: 245 LDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCL 304
Query: 291 ERGVEKAQSVIATLKEKGFLVND 313
+ ++KA S++ + + ND
Sbjct: 305 KGKLDKAVSLLERMVSSKCIPND 327
Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 91/186 (48%), Gaps = 15/186 (8%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+EA +++K+M +TG N ++DGLC G ++EAM ++ M G P+ V Y+++
Sbjct: 449 EEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSI 508
Query: 215 VDGFCKAQKFDDAKRIFRKMQSN---GIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLE 271
+ G C D A +++ +M P+ +YN+L+ GL + AV+ ML+
Sbjct: 509 IKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLD 568
Query: 272 AGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVREFLDKKAPFSSSVW 331
G P+V T ++ L EK+ S K + FL + VR ++ + ++
Sbjct: 569 RGCDPDVITCNTFLNTL-----SEKSNSCD---KGRSFL-EELVVRLLKRQRVSGACTIV 619
Query: 332 EAIFGK 337
E + GK
Sbjct: 620 EVMLGK 625
Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 3/153 (1%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
+A + ++M + IPN V +++GL K +A++L M E+G IY+ ++
Sbjct: 310 KAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLI 369
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
G K K ++A ++RKM G PN Y++L+ GL + K EA E M+ +G
Sbjct: 370 SGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCL 429
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
PN T+ L+ G + E+A V + + G
Sbjct: 430 PNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTG 462
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 82/150 (54%), Gaps = 3/150 (2%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA++++ +M + + P+ ++++G C + EA +F LM K P VV Y ++
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
+GFCKA++ D+ +FR+M G+ N +Y LI G ++ + A +M+ G
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 467
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLK 305
PN+ T+ L+DGLC+ +EKA V L+
Sbjct: 468 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 497
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 85/153 (55%), Gaps = 3/153 (1%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA +F+ M PN V +++G CK I E ++LF M ++G + V YT ++
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
GF +A+ D+A+ +F++M S+G+ PN +YN L+ GL K KLE+A+ + +
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 502
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
P + T+ +++G+C+ VE + +L KG
Sbjct: 503 PTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 535
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 83/170 (48%), Gaps = 3/170 (1%)
Query: 155 EPPQEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIY 211
E +A + M E + PN V A++D K+G + EA KL+ M ++ P++ Y
Sbjct: 309 ERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 368
Query: 212 TAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLE 271
+++++GFC + D+AK +F M S PN +YN LI G K +++E VE EM +
Sbjct: 369 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQ 428
Query: 272 AGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVREFLD 321
G N T+ L+ G + R + AQ V + G N LD
Sbjct: 429 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 478
Score = 82.4 bits (202), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 75/147 (51%), Gaps = 3/147 (2%)
Query: 157 PQEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTA 213
EA + +M + G PN V +++GLCK G I A L M VVIY+
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYST 265
Query: 214 VVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAG 273
V+D CK + DDA +F +M++ G+ PN +Y+ LI L + +A +M+E
Sbjct: 266 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK 325
Query: 274 HSPNVTTFVGLVDGLCRERGVEKAQSV 300
+PNV TF L+D +E + +A+ +
Sbjct: 326 INPNVVTFNALIDAFVKEGKLVEAEKL 352
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 79/153 (51%), Gaps = 3/153 (1%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
E E+F++M + GL+ N V ++ G + A +F M G P ++ Y ++
Sbjct: 418 EGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
DG CK K + A +F +Q + + P ++YN++I+G+ K K+E+ + + G
Sbjct: 478 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 537
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
P+V + ++ G CR+ E+A ++ ++E G
Sbjct: 538 PDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 75/140 (53%), Gaps = 3/140 (2%)
Query: 165 KKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKA 221
+KM+ G+ N +++ C+ I A+ L G M + G P +V +++++G+C
Sbjct: 109 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168
Query: 222 QKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTF 281
++ DA + +M G P+ ++ LI GL+ NK EAV M++ G PN+ T+
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 282 VGLVDGLCRERGVEKAQSVI 301
+V+GLC+ ++ A +++
Sbjct: 229 GVVVNGLCKRGDIDLAFNLL 248
Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 3/151 (1%)
Query: 160 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A + KM+ + N V ++D LCK +A+ LF M KG P V+ Y++++
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
C +++ DA R+ M I PN ++N LI K KL EA + EM++ P
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEK 307
++ T+ L++G C +++A+ + + K
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMFELMISK 394
Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 83/157 (52%), Gaps = 3/157 (1%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
+A +F +M+ G+ PN + +++ LC +A +L M E+ P VV + A++
Sbjct: 278 DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALI 337
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
D F K K +A++++ +M I P+ F+Y+ LI G ++L+EA M+
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVN 312
PNV T+ L++G C+ + +++ + + ++G + N
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGN 434
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 65/124 (52%), Gaps = 3/124 (2%)
Query: 160 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A +FK+M G+ PN + +LDGLCK+G +++AM +F ++ P + Y +++
Sbjct: 454 AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 513
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
G CKA K +D +F + G+ P+ YN +I G + EEA +M E G P
Sbjct: 514 GMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
Query: 277 NVTT 280
+ T
Sbjct: 574 DSGT 577
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+A + +M E G P+ + ++ GL EA+ L M ++G P +V Y V
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
V+G CK D A + KM++ I N Y+ +I L K ++A+ EM G
Sbjct: 232 VNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 291
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEK 307
PNV T+ L+ LC A +++ + E+
Sbjct: 292 RPNVITYSSLISCLCNYERWSDASRLLSDMIER 324
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 66/121 (54%)
Query: 189 IQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNL 248
+ +A+ LFG M + +P + + ++ K +KFD + KMQ GI+ N ++YN+
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 249 LIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
LI + +++ A+ +M++ G+ P++ T L++G C + + A +++ + E G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 309 F 309
+
Sbjct: 186 Y 186
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 3/152 (1%)
Query: 160 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A + KM + G P+ V ++L+G C I +A+ L M E G P+ + +T ++
Sbjct: 139 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 198
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
G K +A + +M G PN +Y +++ GL K ++ A +M A
Sbjct: 199 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 258
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
NV + ++D LC+ R + A ++ ++ KG
Sbjct: 259 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 81/145 (55%), Gaps = 3/145 (2%)
Query: 171 GLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDA 227
G++P+ +++ G K+GL+ A+++ MR KG P V YT +VDGFCK K D+A
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 443
Query: 228 KRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDG 287
+ +M ++G+ PN +N LI K +++ EAVE EM G P+V TF L+ G
Sbjct: 444 YNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 503
Query: 288 LCRERGVEKAQSVIATLKEKGFLVN 312
LC ++ A ++ + +G + N
Sbjct: 504 LCEVDEIKHALWLLRDMISEGVVAN 528
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 89/160 (55%), Gaps = 9/160 (5%)
Query: 159 EADEI------FKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVV 209
E DEI + M G++ N V +++ + G I+EA KL M +G+ + +
Sbjct: 506 EVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEI 565
Query: 210 IYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEM 269
Y +++ G C+A + D A+ +F KM +G AP+ S N+LI GL + +EEAVE+ EM
Sbjct: 566 TYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEM 625
Query: 270 LEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
+ G +P++ TF L++GLCR +E ++ L+ +G
Sbjct: 626 VLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI 665
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 3/153 (1%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA + +M GL PN V ++ CK+ I EA+++F M KG P+V + +++
Sbjct: 442 EAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI 501
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
G C+ + A + R M S G+ N +YN LI + +++EA + EM+ G
Sbjct: 502 SGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSP 561
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
+ T+ L+ GLCR V+KA+S+ + G
Sbjct: 562 LDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Score = 82.4 bits (202), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 81/155 (52%), Gaps = 8/155 (5%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA ++ +M G P+ + +++GLCK G + A LF + + PE+VI+ ++
Sbjct: 305 EAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLI 360
Query: 216 DGFCKAQKFDDAKRIFRKM-QSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
GF + DDAK + M S GI P+ +YN LI G +K + A+E +M G
Sbjct: 361 HGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGC 420
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
PNV ++ LVDG C+ +++A +V+ + G
Sbjct: 421 KPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGL 455
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Query: 160 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A E+ M+ G PN + ++DG CK G I EA + M G P V + ++
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLIS 467
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
FCK + +A IFR+M G P+ +++N LI GL + ++++ A+ +M+ G
Sbjct: 468 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 527
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
N T+ L++ R +++A+ ++ + +G
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQG 559
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 79/133 (59%), Gaps = 3/133 (2%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
+A +F+KM G P+ ++ +++GLC+ G+++EA++ M +G+ P++V + +++
Sbjct: 582 KARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI 641
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
+G C+A + +D +FRK+Q+ GI P+ ++N L+ L K + +A E +E G
Sbjct: 642 NGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFV 701
Query: 276 PNVTTFVGLVDGL 288
PN T+ L+ +
Sbjct: 702 PNHRTWSILLQSI 714
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 78/142 (54%), Gaps = 3/142 (2%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA EIF++M G P+ +++ GLC+ I+ A+ L M +G + V Y ++
Sbjct: 477 EAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLI 536
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
+ F + + +A+++ +M G + +YN LI+GL + ++++A +ML GH+
Sbjct: 537 NAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHA 596
Query: 276 PNVTTFVGLVDGLCRERGVEKA 297
P+ + L++GLCR VE+A
Sbjct: 597 PSNISCNILINGLCRSGMVEEA 618
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 60/122 (49%)
Query: 192 AMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQ 251
A +F M + P + + V+ FC + D A + R M +G PN+ Y LI
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260
Query: 252 GLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLV 311
L KCN++ EA++ EM G P+ TF ++ GLC+ + +A ++ + +GF
Sbjct: 261 SLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAP 320
Query: 312 ND 313
+D
Sbjct: 321 DD 322
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 178 AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSN 237
++ C I A+ L M + G +P VIY ++ K + ++A ++ +M
Sbjct: 222 VVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLM 281
Query: 238 GIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKA 297
G P+A ++N +I GL K +++ EA + ML G +P+ T+ L++GLC+ V+ A
Sbjct: 282 GCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA 341
Query: 298 QSVIATLKEKGFLVNDKAVREFL------DKKAPFSSSV 330
+ + + + ++ + + F+ D KA S V
Sbjct: 342 KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMV 380
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 70/148 (47%)
Query: 178 AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSN 237
+++ GLC+ G + +A LF M G P + +++G C++ ++A ++M
Sbjct: 569 SLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLR 628
Query: 238 GIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKA 297
G P+ ++N LI GL + ++E+ + ++ G P+ TF L+ LC+ V A
Sbjct: 629 GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688
Query: 298 QSVIATLKEKGFLVNDKAVREFLDKKAP 325
++ E GF+ N + L P
Sbjct: 689 CLLLDEGIEDGFVPNHRTWSILLQSIIP 716
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 78/147 (53%), Gaps = 3/147 (2%)
Query: 157 PQEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTA 213
+ A + KM+ET + P+ V A++D LCKDG +A LF M EKG P V Y
Sbjct: 277 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 336
Query: 214 VVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAG 273
++DGFC ++ DA+R+ R M I P+ ++N LI K KL EA + C EML
Sbjct: 337 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 396
Query: 274 HSPNVTTFVGLVDGLCRERGVEKAQSV 300
P+ T+ ++ G C+ + A+ +
Sbjct: 397 IFPDTVTYNSMIYGFCKHNRFDDAKHM 423
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA + KM GL + V +++G+CK G + A+ L M E P+VVIY+A++
Sbjct: 244 EAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAII 303
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
D CK DA+ +F +M GIAPN F+YN +I G + +A +M+E +
Sbjct: 304 DRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREIN 363
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSV 300
P+V TF L+ +E + +A+ +
Sbjct: 364 PDVLTFNALISASVKEGKLFEAEKL 388
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 75/152 (49%), Gaps = 3/152 (1%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA +F +M E GL P + +++GLC +G + EA L M KG +VV Y +V
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
+G CK A + KM+ I P+ Y+ +I L K +A EMLE G +
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEK 307
PNV T+ ++DG C AQ ++ + E+
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 85/153 (55%), Gaps = 3/153 (1%)
Query: 160 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A ++F++M G+ P+ + +L G C++ ++EA++LF +++ + V Y ++
Sbjct: 486 AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 545
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
G CK K D+A +F + +G+ P+ +YN++I G + + +A +M + GH P
Sbjct: 546 GMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEP 605
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
+ +T+ L+ G + ++K+ +I+ ++ GF
Sbjct: 606 DNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF 638
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 7/142 (4%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA+++ +M + P+ V +M+ G CK +A +F LM P+VV + ++
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTII 439
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
D +C+A++ D+ ++ R++ G+ N +YN LI G + + L A + EM+ G
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Query: 276 PNVTTFVGLVDGLCRERGVEKA 297
P+ T L+ G C +E+A
Sbjct: 500 PDTITCNILLYGFCENEKLEEA 521
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 3/135 (2%)
Query: 155 EPPQEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIY 211
E +EA E+F+ ++ + + + VA ++ G+CK + EA LF + G P+V Y
Sbjct: 516 EKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTY 575
Query: 212 TAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLE 271
++ GFC DA +F KM+ NG P+ +YN LI+G K ++++++E EM
Sbjct: 576 NVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRS 635
Query: 272 AGHSPNVTTFVGLVD 286
G S + T + D
Sbjct: 636 NGFSGDAFTIKMVAD 650
Score = 72.0 bits (175), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 18/164 (10%)
Query: 164 FKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTI--------------- 205
F K+ + G P+ V +L GLC + I EA+ LFG M E G +
Sbjct: 164 FGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLT 223
Query: 206 PEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEY 265
P V+ + +++G C + +A + KM G+ + +Y ++ G+ K + A+
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 266 CIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
+M E P+V + ++D LC++ AQ + + + EKG
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 327
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 77/153 (50%), Gaps = 3/153 (1%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
E ++ +++ GL+ N ++ G C+ + A LF M G P+ + ++
Sbjct: 450 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 509
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
GFC+ +K ++A +F +Q + I + +YN++I G+ K +K++EA + + G
Sbjct: 510 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 569
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
P+V T+ ++ G C + + A + +K+ G
Sbjct: 570 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 602
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 7/154 (4%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+A + + M E + P+ + A++ K+G + EA KL M + P+ V Y ++
Sbjct: 348 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 407
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+ GFCK +FDDAK +F M S P+ ++N +I + +++E ++ E+ G
Sbjct: 408 IYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
N TT+ L+ G C + AQ + + G
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 61/122 (50%)
Query: 189 IQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNL 248
+ +A+ F M V V+ F + + D A ++RKM+ I N +S+N+
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 249 LIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
LI+ C+KL ++ ++ + G P+V TF L+ GLC E + +A ++ + E G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 309 FL 310
FL
Sbjct: 207 FL 208
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 77/169 (45%), Gaps = 20/169 (11%)
Query: 157 PQEADEIFKKMKETGLIPNAV----AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYT 212
P A +++KM E IP + ++ C + ++ FG + + G P+VV +
Sbjct: 122 PDVAISLYRKM-EIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFN 180
Query: 213 AVVDGFCKAQK---------------FDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCN 257
++ G C + F +A +F +M G+ P ++N LI GL
Sbjct: 181 TLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEG 240
Query: 258 KLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKE 306
++ EA +M+ G +V T+ +V+G+C+ + A ++++ ++E
Sbjct: 241 RVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
>sp|Q9FFE3|PP388_ARATH Pentatricopeptide repeat-containing protein At5g16420,
mitochondrial OS=Arabidopsis thaliana GN=At5g16420 PE=2
SV=1
Length = 535
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 95/169 (56%), Gaps = 5/169 (2%)
Query: 159 EADEIFKKMKETGLIP-NAV--AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA +++KM + +P NA+ ++ LCK+G + EA KLF EKG+IP ++ Y ++
Sbjct: 349 EACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLI 407
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
G C+ + +A R++ M PNAF+YN+LI+GL K ++E V EMLE G
Sbjct: 408 AGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCF 467
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVREFLDKKA 324
PN TTF+ L +GL + E A +++ G V+ ++ FL K A
Sbjct: 468 PNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNG-KVDKESWELFLKKFA 515
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 75/143 (52%), Gaps = 3/143 (2%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+ A ++ ++ GL+PN V +L G G ++ A ++ M ++G P+ YT +
Sbjct: 208 ESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVL 267
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+DG+CK +F +A + M+ N I PN +Y ++I+ L K K EA EMLE
Sbjct: 268 MDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSF 327
Query: 275 SPNVTTFVGLVDGLCRERGVEKA 297
P+ + ++D LC + V++A
Sbjct: 328 MPDSSLCCKVIDALCEDHKVDEA 350
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 81/163 (49%), Gaps = 4/163 (2%)
Query: 163 IFKKMKET-GLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGF 218
+FK KE+ G+ PN ++ LCK I+ A K+ + G +P +V YT ++ G+
Sbjct: 177 MFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGY 236
Query: 219 CKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNV 278
+ AKR+ +M G P+A +Y +L+ G K + EA +M + PN
Sbjct: 237 VARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNE 296
Query: 279 TTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVREFLD 321
T+ ++ LC+E+ +A+++ + E+ F+ + + +D
Sbjct: 297 VTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVID 339
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 3/146 (2%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+ A + ++M + G P+A ++DG CK G EA + M + P V Y +
Sbjct: 243 ESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVM 302
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+ CK +K +A+ +F +M P++ +I L + +K++EA +ML+
Sbjct: 303 IRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNC 362
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSV 300
P+ L+ LC+E V +A+ +
Sbjct: 363 MPDNALLSTLIHWLCKEGRVTEARKL 388
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 86/153 (56%), Gaps = 3/153 (1%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
++A E+ +MK +G + V ++D CK G + EAM M+ G ++V+YT++
Sbjct: 194 EKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSL 253
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+ GFC + D K +F ++ G +P A +YN LI+G K +L+EA E M+E G
Sbjct: 254 IRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGV 313
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEK 307
PNV T+ GL+DGLC ++A ++ + EK
Sbjct: 314 RPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEK 346
Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 81/155 (52%), Gaps = 5/155 (3%)
Query: 158 QEADEIFKKMKETGLIPNA---VAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+EA EIF+ M E G+ PN ++DGLC G +EA++L LM EK P V Y +
Sbjct: 299 KEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNII 358
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLE--A 272
++ CK DA I M+ P+ +YN+L+ GL L+EA + ML+ +
Sbjct: 359 INKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSS 418
Query: 273 GHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEK 307
P+V ++ L+ GLC+E + +A + L EK
Sbjct: 419 YTDPDVISYNALIHGLCKENRLHQALDIYDLLVEK 453
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA K+MK GL + V +++ G C G + LF + E+G P + Y ++
Sbjct: 230 EAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLI 289
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
GFCK + +A IF M G+ PN ++Y LI GL K +EA++ M+E
Sbjct: 290 RGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEE 349
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEK 307
PN T+ +++ LC++ V A ++ +K++
Sbjct: 350 PNAVTYNIIINKLCKDGLVADAVEIVELMKKR 381
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Query: 159 EADEIFKKMKETGLIPNA---VAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
+A E++K++ ++ ++ N+ AM+DG CK G++ A L MR P V Y ++
Sbjct: 477 KAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLL 536
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
CK D A R+F +MQ + P+ S+N++I G K ++ A + M AG S
Sbjct: 537 SSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLS 596
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
P++ T+ L++ + +++A S + + GF
Sbjct: 597 PDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGF 630
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 75/142 (52%), Gaps = 3/142 (2%)
Query: 163 IFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFC 219
+F ++ E G P A+ ++ G CK G ++EA ++F M E+G P V YT ++DG C
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLC 328
Query: 220 KAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVT 279
K +A ++ M PNA +YN++I L K + +AVE M + P+
Sbjct: 329 GVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNI 388
Query: 280 TFVGLVDGLCRERGVEKAQSVI 301
T+ L+ GLC + +++A ++
Sbjct: 389 TYNILLGGLCAKGDLDEASKLL 410
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 88/171 (51%), Gaps = 7/171 (4%)
Query: 157 PQEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTA 213
+EA ++ M E PNAV +++ LCKDGL+ +A+++ LM+++ T P+ + Y
Sbjct: 333 TKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNI 392
Query: 214 VVDGFCKAQKFDDAKRIFRKM--QSNGIAPNAFSYNLLIQGLYKCNKLEEAVE-YCIEML 270
++ G C D+A ++ M S+ P+ SYN LI GL K N+L +A++ Y + +
Sbjct: 393 LLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVE 452
Query: 271 EAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVREFLD 321
+ G VTT + L++ + V KA + + + + N +D
Sbjct: 453 KLGAGDRVTTNI-LLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMID 502
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 71/136 (52%)
Query: 173 IPNAVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFR 232
+ N +L GLC++ +A+ L MR +P+V Y V+ GFC+ ++ + A +
Sbjct: 142 VYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELAN 201
Query: 233 KMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRER 292
+M+ +G + + ++ +LI K K++EA+ + EM G ++ + L+ G C
Sbjct: 202 EMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCG 261
Query: 293 GVEKAQSVIATLKEKG 308
+++ +++ + E+G
Sbjct: 262 ELDRGKALFDEVLERG 277
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 15/179 (8%)
Query: 154 SEPPQEADEIFKKMKETGLIPNAVAMLDGLC-------KDGLIQEAMKLFGLMREKGTIP 206
S + A ++KM ET N V+ L GL K G A + LM ++G
Sbjct: 85 SRNHELAFSFYRKMLETDTFINFVS-LSGLLECYVQMRKTGF---AFGVLALMLKRGFAF 140
Query: 207 EVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYC 266
V + ++ G C+ + A + R+M+ N + P+ FSYN +I+G + +LE+A+E
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 267 IEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLK----EKGFLVNDKAVREFLD 321
EM +G S ++ T+ L+D C+ +++A + +K E +V +R F D
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCD 259
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 69/131 (52%)
Query: 179 MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNG 238
+L+ K G + +AM+L+ + + + YTA++DGFCK + AK + KM+ +
Sbjct: 465 LLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE 524
Query: 239 IAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQ 298
+ P+ F YN L+ L K L++A EM + P+V +F ++DG + ++ A+
Sbjct: 525 LQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAE 584
Query: 299 SVIATLKEKGF 309
S++ + G
Sbjct: 585 SLLVGMSRAGL 595
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 65/121 (53%), Gaps = 3/121 (2%)
Query: 160 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A + KM+ + L P+ +L LCK+G + +A +LF M+ P+VV + ++D
Sbjct: 513 AKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMID 572
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
G KA A+ + M G++P+ F+Y+ LI K L+EA+ + +M+++G P
Sbjct: 573 GSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEP 632
Query: 277 N 277
+
Sbjct: 633 D 633
>sp|Q9LKU8|PP401_ARATH Pentatricopeptide repeat-containing protein At5g28460
OS=Arabidopsis thaliana GN=At5g28460 PE=2 SV=1
Length = 766
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 82/156 (52%), Gaps = 4/156 (2%)
Query: 158 QEADEIFKKMK-ETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTA 213
+EA+E+ +MK E +PNAV ++DG C+ G ++ A ++ M+E P VV
Sbjct: 387 KEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNT 446
Query: 214 VVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAG 273
+V G C+ + A F M+ G+ N +Y LI + +E+A+ + +MLEAG
Sbjct: 447 IVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAG 506
Query: 274 HSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
SP+ + L+ GLC+ R A V+ LKE GF
Sbjct: 507 CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGF 542
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 89/165 (53%), Gaps = 10/165 (6%)
Query: 154 SEPPQEADEIFKKMK----ETGLIPNAVA-----MLDGLCKDGLIQEAMKLFGLMR-EKG 203
S EA E+F++M+ + G + A + ++DGLCK G ++EA +L M+ E+
Sbjct: 342 SRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEER 401
Query: 204 TIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAV 263
+P V Y ++DG+C+A K + AK + +M+ + I PN + N ++ G+ + + L AV
Sbjct: 402 CVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAV 461
Query: 264 EYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
+ ++M + G NV T++ L+ C VEKA + E G
Sbjct: 462 VFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAG 506
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 28/225 (12%)
Query: 108 SPDGVQSDENFLDQFKLAIDKKPGNPQQNESLGQRQEQKPNRNEPISEPPQEA------- 160
S GV + +L +F I N + N + + N+ P+ PP A
Sbjct: 251 SSHGVSPNSVWLTRF---ISSLCKNARANTAWDILSDLMKNKT-PLEAPPFNALLSCLGR 306
Query: 161 -------DEIFKKMKETGLIPNAVAM---LDGLCKDGLIQEAMKLFGLMREKGTIPEVVI 210
+++ KM E + P+ V + ++ LCK + EA+++F MR K T VI
Sbjct: 307 NMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVI 366
Query: 211 ------YTAVVDGFCKAQKFDDAKRIFRKMQ-SNGIAPNAFSYNLLIQGLYKCNKLEEAV 263
+ ++DG CK + +A+ + +M+ PNA +YN LI G + KLE A
Sbjct: 367 KADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAK 426
Query: 264 EYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
E M E PNV T +V G+CR G+ A ++++G
Sbjct: 427 EVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG 471
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 3/149 (2%)
Query: 164 FKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCK 220
F M++ G+ N V ++ C +++AM + M E G P+ IY A++ G C+
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 221 AQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTT 280
++ DA R+ K++ G + + +YN+LI N E+ E +M + G P+ T
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSIT 583
Query: 281 FVGLVDGLCRERGVEKAQSVIATLKEKGF 309
+ L+ + + E + ++ ++E G
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGL 612
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 3/154 (1%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+ A E+ +MKE + PN V ++ G+C+ + A+ F M ++G VV Y +
Sbjct: 423 ETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTL 482
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+ C + A + KM G +P+A Y LI GL + + +A+ ++ E G
Sbjct: 483 IHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGF 542
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
S ++ + L+ C + EK ++ ++++G
Sbjct: 543 SLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEG 576
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 5/130 (3%)
Query: 164 FKKMKETGLIPNA---VAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCK 220
++KM E G P+A A++ GLC+ +A+++ ++E G +++ Y ++ FC
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD 558
Query: 221 AQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIE-MLEAGHSPNVT 279
+ + M+ G P++ +YN LI K +K E+VE +E M E G P VT
Sbjct: 559 KNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGK-HKDFESVERMMEQMREDGLDPTVT 617
Query: 280 TFVGLVDGLC 289
T+ ++D C
Sbjct: 618 TYGAVIDAYC 627
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 4/135 (2%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTI-PEVVIYTA 213
+ + + ++M+E GL P A++D C G + EA+KLF M + P VIY
Sbjct: 598 ESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNI 657
Query: 214 VVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAG 273
+++ F K F A + +M+ + PN +YN L + L + + E ++ EM+E
Sbjct: 658 LINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQS 717
Query: 274 HSPNVTTFVGLVDGL 288
PN T L++ L
Sbjct: 718 CEPNQITMEILMERL 732
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 7/164 (4%)
Query: 149 RNEPISEPPQEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQE--AMKLFGLMREKG 203
RN + + + DE+ +K E+ PN + +L + K+ L+ E + L G
Sbjct: 197 RNGLVDDAFKVLDEMLQK--ESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHG 254
Query: 204 TIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAV 263
P V T + CK + + A I + N A +N L+ L + +
Sbjct: 255 VSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMN 314
Query: 264 EYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEK 307
+ ++M E P+V T L++ LC+ R V++A V ++ K
Sbjct: 315 DLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGK 358
>sp|Q84J71|PP161_ARATH Pentatricopeptide repeat-containing protein At2g17670
OS=Arabidopsis thaliana GN=At2g17670 PE=2 SV=1
Length = 463
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 78/142 (54%)
Query: 179 MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNG 238
++D +C ++EAM L + G P+ +Y ++ GFC K +A +++KM+ G
Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG 295
Query: 239 IAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQ 298
+ P+ +YN LI GL K ++EEA Y M++AG+ P+ T+ L++G+CR+ A
Sbjct: 296 VEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGAL 355
Query: 299 SVIATLKEKGFLVNDKAVREFL 320
S++ ++ +G ND L
Sbjct: 356 SLLEEMEARGCAPNDCTYNTLL 377
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 74/146 (50%), Gaps = 3/146 (2%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
EA ++KKMKE G+ P+ + ++ GL K G ++EA M + G P+ YT++
Sbjct: 282 SEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSL 341
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
++G C+ + A + +M++ G APN +YN L+ GL K +++ +E M +G
Sbjct: 342 MNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGV 401
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSV 300
+ LV L + V +A V
Sbjct: 402 KLESNGYATLVRSLVKSGKVAEAYEV 427
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 65/136 (47%), Gaps = 3/136 (2%)
Query: 177 VAMLDGLCK--DGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKM 234
+ +L C+ D I ++ LM G P+ V V C+ + D+AK + +++
Sbjct: 126 LILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKEL 185
Query: 235 QSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEA-GHSPNVTTFVGLVDGLCRERG 293
P+ ++YN L++ L KC L E+ EM + P++ +F L+D +C +
Sbjct: 186 TEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKN 245
Query: 294 VEKAQSVIATLKEKGF 309
+ +A +++ L GF
Sbjct: 246 LREAMYLVSKLGNAGF 261
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 88/158 (55%), Gaps = 3/158 (1%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+E E+F++M + GL+ N V ++ GL + G A K+F M G P+++ Y+ +
Sbjct: 412 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+DG CK K + A +F +Q + + P+ ++YN++I+G+ K K+E+ + + G
Sbjct: 472 LDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 531
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVN 312
PNV + ++ G CR+ E+A ++ +KE G L N
Sbjct: 532 KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPN 569
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA++++ +M + + P+ ++++G C + EA +F LM K P VV Y ++
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
GFCKA++ ++ +FR+M G+ N +YN LIQGL++ + A + +M+ G
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 462
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKE 306
P++ T+ L+DGLC+ +EKA V L++
Sbjct: 463 PDIITYSILLDGLCKYGKLEKALVVFEYLQK 493
Score = 89.0 bits (219), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 85/153 (55%), Gaps = 3/153 (1%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA +F+ M PN V ++ G CK ++E M+LF M ++G + V Y ++
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
G +A D A++IF+KM S+G+ P+ +Y++L+ GL K KLE+A+ + ++
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
P++ T+ +++G+C+ VE + +L KG
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+A + M E + PN V A++D K+G + EA KL+ M ++ P++ Y+++
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
++GFC + D+AK +F M S PN +YN LI+G K ++EE +E EM + G
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
N T+ L+ GL + + AQ + + G
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Score = 81.6 bits (200), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 78/148 (52%), Gaps = 5/148 (3%)
Query: 157 PQEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTI-PEVVIYT 212
EA + +M G P+ +++GLCK G I A+ L M EKG I +VVIYT
Sbjct: 201 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYT 259
Query: 213 AVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEA 272
++D C + +DA +F +M + GI PN +YN LI+ L + +A +M+E
Sbjct: 260 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 319
Query: 273 GHSPNVTTFVGLVDGLCRERGVEKAQSV 300
+PNV TF L+D +E + +A+ +
Sbjct: 320 KINPNVVTFSALIDAFVKEGKLVEAEKL 347
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 83/157 (52%), Gaps = 3/157 (1%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
+A +F +M G+ PN V +++ LC G +A +L M E+ P VV ++A++
Sbjct: 273 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 332
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
D F K K +A++++ +M I P+ F+Y+ LI G ++L+EA M+
Sbjct: 333 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 392
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVN 312
PNV T+ L+ G C+ + VE+ + + ++G + N
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGN 429
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 79/154 (51%), Gaps = 3/154 (1%)
Query: 160 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A +IFKKM G+ P+ + +LDGLCK G +++A+ +F +++ P++ Y +++
Sbjct: 449 AQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIE 508
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
G CKA K +D +F + G+ PN Y +I G + EEA EM E G P
Sbjct: 509 GMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP 568
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFL 310
N T+ L+ R+ + +I ++ GF+
Sbjct: 569 NSGTYNTLIRARLRDGDKAASAELIKEMRSCGFV 602
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 75/151 (49%), Gaps = 3/151 (1%)
Query: 160 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A + KKM++ + + V ++D LC + +A+ LF M KG P VV Y +++
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
C ++ DA R+ M I PN +++ LI K KL EA + EM++ P
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEK 307
++ T+ L++G C +++A+ + + K
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISK 389
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 79/143 (55%), Gaps = 4/143 (2%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
++A +F+ ++++ + P+ M++G+CK G +++ LF + KG P V+IYT +
Sbjct: 482 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTM 541
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+ GFC+ ++A +FR+M+ +G PN+ +YN LI+ + + E EM G
Sbjct: 542 ISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGF 601
Query: 275 SPNVTTFVGLVDGLCRERGVEKA 297
+ +T + +V + + +EK+
Sbjct: 602 VGDAST-ISMVINMLHDGRLEKS 623
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 75/138 (54%), Gaps = 1/138 (0%)
Query: 179 MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNG 238
+++ C+ + A+ + G M + G P++V +++++G+C ++ +A + +M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 239 IAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQ 298
PN ++N LI GL+ NK EAV M+ G P++ T+ +V+GLC+ ++ A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 299 SVIATLKEKGFLVNDKAV 316
S++ + EKG + D +
Sbjct: 241 SLLKKM-EKGKIEADVVI 257
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 68/158 (43%), Gaps = 7/158 (4%)
Query: 153 ISEPPQEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVV 209
ISE D++F + PN V ++ GL EA+ L M +G P++
Sbjct: 166 ISEAVALVDQMFVMEYQ----PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLF 221
Query: 210 IYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEM 269
Y VV+G CK D A + +KM+ I + Y +I L + +A+ EM
Sbjct: 222 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM 281
Query: 270 LEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEK 307
G PNV T+ L+ LC A +++ + E+
Sbjct: 282 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 319
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 63/113 (55%)
Query: 189 IQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNL 248
+ +A+ LFG M + +P +V + ++ K KFD + +MQ+ I+ + +SYN+
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 249 LIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVI 301
LI + ++L A+ +M++ G+ P++ T L++G C + + +A +++
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 173
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 68/153 (44%), Gaps = 3/153 (1%)
Query: 160 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A + KM + G P+ V ++L+G C I EA+ L M P V + ++
Sbjct: 134 ALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIH 193
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
G K +A + +M + G P+ F+Y ++ GL K ++ A+ +M +
Sbjct: 194 GLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 253
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
+V + ++D LC + V A ++ + KG
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 286
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 73/167 (43%), Gaps = 3/167 (1%)
Query: 145 QKPNRNEPISEPPQEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMRE 201
+K +RN + +A ++F +M ++ +P+ V +L + K + L M+
Sbjct: 49 EKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQN 108
Query: 202 KGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEE 261
++ Y +++ FC+ + A + KM G P+ + + L+ G ++ E
Sbjct: 109 LRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISE 168
Query: 262 AVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
AV +M + PN TF L+ GL +A ++I + +G
Sbjct: 169 AVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG 215
>sp|O81028|PP171_ARATH Pentatricopeptide repeat-containing protein At2g26790,
mitochondrial OS=Arabidopsis thaliana GN=At2g26790 PE=3
SV=1
Length = 799
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 103/193 (53%), Gaps = 16/193 (8%)
Query: 159 EADEIFKKMKETGLIPNAVAM---LDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA E FK+ ++ + + V D L K G ++EA +L M+++G +P+V+ YT ++
Sbjct: 371 EALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLI 430
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
DG+C K DA + +M NG++P+ +YN+L+ GL + EE +E M G
Sbjct: 431 DGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPK 490
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKE----------KGFL---VNDKAVREFLDK 322
PN T +++GLC R V++A+ ++L++ KG+ ++ KA + F+
Sbjct: 491 PNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRL 550
Query: 323 KAPFSSSVWEAIF 335
+ P SV+ +F
Sbjct: 551 EYPLRKSVYIKLF 563
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 3/153 (1%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA KM GL N V +L CK + EA++ F R+ + V Y
Sbjct: 336 EALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAF 395
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
D K + ++A + ++M+ GI P+ +Y LI G K+ +A++ EM+ G S
Sbjct: 396 DALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMS 455
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
P++ T+ LV GL R E+ + +K +G
Sbjct: 456 PDLITYNVLVSGLARNGHEEEVLEIYERMKAEG 488
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 16/168 (9%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
++A ++ KKM + P M+ CK ++EA LF M E+G IP++ YT +
Sbjct: 573 EKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIM 632
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYK--------CNKLEE----- 261
+ +C+ + A+ +F M+ GI P+ +Y +L+ K C+ E
Sbjct: 633 IHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRK 692
Query: 262 AVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
A E E AG +V + L+D C+ +E+A + + + G
Sbjct: 693 ASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGL 740
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 3/147 (2%)
Query: 158 QEADEIFKKMKETGL---IPNAVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+ A+ + +M+E G + +A++D CK+ + EA+ M KG VI + +
Sbjct: 300 KAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLI 359
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+ +CK +A F++ + I + YN+ L K ++EEA E EM + G
Sbjct: 360 LQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGI 419
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVI 301
P+V + L+DG C + V A +I
Sbjct: 420 VPDVINYTTLIDGYCLQGKVVDALDLI 446
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 89/219 (40%), Gaps = 66/219 (30%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+EA E+ ++MK+ G++P+ + ++DG C G + +A+ L M G P+++ Y +
Sbjct: 405 EEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVL 464
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEA------------ 262
V G + ++ I+ +M++ G PNA + +++I+GL K++EA
Sbjct: 465 VSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCP 524
Query: 263 -------------------------VEY--------------CIE-MLEAGHS------- 275
+EY CIE LE H
Sbjct: 525 ENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSA 584
Query: 276 ----PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFL 310
P + ++ C+ V +AQ + T+ E+G +
Sbjct: 585 YRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLI 623
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 54/110 (49%)
Query: 177 VAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQS 236
+ + LC +G +++A + M P + ++ FCK +A+ +F M
Sbjct: 560 IKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVE 619
Query: 237 NGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVD 286
G+ P+ F+Y ++I + N+L++A +M + G P+V T+ L+D
Sbjct: 620 RGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLD 669
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 187 GLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSY 246
G I M LF +++ G Y VV C+ ++A + + +S F Y
Sbjct: 195 GKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIENES------VFGY 248
Query: 247 NLLIQGLYKCNKLEEAVEYCIEMLEAGH--SPNVTTFVGLV-DGLCRERGVEKAQSVIAT 303
I GL + E+AV +E+++ + ++ +G+V G C E ++ A+SVI
Sbjct: 249 KTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIE 308
Query: 304 LKEKGFLVNDKAVREFLDK 322
++E GF ++ A +D+
Sbjct: 309 MEEIGFGLDVYACLAVIDR 327
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 16/128 (12%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCK-DGLIQEAMKLFG---------LMRE--- 201
Q+A+ +F+ MK+ G+ P+ V +LD K D E + G ++RE
Sbjct: 643 QKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSA 702
Query: 202 KGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEE 261
G +VV YT ++D CK + A +F +M +G+ P+ +Y LI ++ ++
Sbjct: 703 AGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDM 762
Query: 262 AVEYCIEM 269
AV E+
Sbjct: 763 AVTLVTEL 770
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 75/185 (40%), Gaps = 35/185 (18%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPE------- 207
+E EI+++MK G PNAV +++GLC ++EA F + +K PE
Sbjct: 475 EEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQK--CPENKASFVK 532
Query: 208 -----------------------VVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAF 244
+Y + C + A + +KM + + P
Sbjct: 533 GYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRS 592
Query: 245 SYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATL 304
+I K N + EA M+E G P++ T+ ++ CR ++KA+S+ +
Sbjct: 593 MCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDM 652
Query: 305 KEKGF 309
K++G
Sbjct: 653 KQRGI 657
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 72/163 (44%), Gaps = 12/163 (7%)
Query: 151 EPISEPPQEADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVI 210
E I E +E F ++ +G + A L G+ EA + + + ++
Sbjct: 130 EVIGEQAEEKKRSFVLIRVSGALVKAYVSL------GMFDEATDVLFQSKRLDCVVDIKA 183
Query: 211 YTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEML 270
+++ + K +F++++ G+ N ++Y ++++ L + LEEA IE
Sbjct: 184 CNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIE-- 241
Query: 271 EAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVND 313
+ +V + ++GLC EKA ++I L ++ +L D
Sbjct: 242 ----NESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGD 280
Score = 36.2 bits (82), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 68/156 (43%), Gaps = 12/156 (7%)
Query: 163 IFKKMKETGLIPN---AVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFC 219
+FK++K+ GL N ++ LC+ G ++EA L L+ + Y ++G C
Sbjct: 203 LFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAML--LIENESVFG----YKTFINGLC 256
Query: 220 KAQKFDDA-KRIFRKMQSNGIAPNAF--SYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
+ + A I + +A + ++++G K++ A IEM E G
Sbjct: 257 VTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGL 316
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVN 312
+V + ++D C+ + +A + + KG VN
Sbjct: 317 DVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVN 352
>sp|Q8LDU5|PP298_ARATH Pentatricopeptide repeat-containing protein At4g01400,
mitochondrial OS=Arabidopsis thaliana GN=At4g01400 PE=2
SV=2
Length = 466
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 82/152 (53%), Gaps = 3/152 (1%)
Query: 160 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A E+ M G +P+ ++ +L+ LC+ ++EA KL M+ KG P++V Y ++
Sbjct: 244 AMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMIL 303
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
GFC+ + DA+++ M SNG +PN+ SY LI GL +E +Y EM+ G SP
Sbjct: 304 GFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSP 363
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
+ + LV G C VE+A V+ + + G
Sbjct: 364 HFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 82/153 (53%), Gaps = 3/153 (1%)
Query: 160 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A ++F KM E ++P+ + ++ G C+ G + AM+L M KG +P+ + YT +++
Sbjct: 209 AYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLN 268
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
C+ + +A ++ +M+ G P+ YN +I G + ++ +A + +ML G SP
Sbjct: 269 SLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSP 328
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
N ++ L+ GLC + ++ + + + KGF
Sbjct: 329 NSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGF 361
Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 81/166 (48%), Gaps = 3/166 (1%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
Q+A E+FK + G++PN + ++ C + + A +LFG M E+ +P+V Y +
Sbjct: 172 QKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKIL 231
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+ GFC+ + + A + M + G P+ SY L+ L + +L EA + M G
Sbjct: 232 IQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGC 291
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVREFL 320
+P++ + ++ G CRE A+ V+ + G N + R +
Sbjct: 292 NPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLI 337
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 76/156 (48%), Gaps = 4/156 (2%)
Query: 157 PQEADEIFKKMKETGLIP---NAVAMLDGLCKD-GLIQEAMKLFGLMREKGTIPEVVIYT 212
P++ F KM E P + +LD L G +Q+A +LF R G +P Y
Sbjct: 135 PEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYN 194
Query: 213 AVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEA 272
++ FC A ++F KM + P+ SY +LIQG + ++ A+E +ML
Sbjct: 195 LLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNK 254
Query: 273 GHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
G P+ ++ L++ LCR+ + +A ++ +K KG
Sbjct: 255 GFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKG 290
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+EA ++ +MK G P+ V M+ G C++ +A K+ M G P V Y +
Sbjct: 277 REAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTL 336
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+ G C FD+ K+ +M S G +P+ N L++G K+EEA + +++ G
Sbjct: 337 IGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGE 396
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQ 298
+ + T+ ++ +C E EK +
Sbjct: 397 TLHSDTWEMVIPLICNEDESEKIK 420
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 84/153 (54%), Gaps = 3/153 (1%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA +F+ M PN V ++ G CK ++E M+LF M ++G + V YT ++
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
GF +A+ D+A+ +F++M S G+ PN +YN+L+ GL K KL +A+ + +
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
P++ T+ +++G+C+ VE + L KG
Sbjct: 501 PDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG 533
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 81/150 (54%), Gaps = 3/150 (2%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA++++ +M + + P+ ++++G C + EA +F LM K P VV Y+ ++
Sbjct: 346 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLI 405
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
GFCKA++ ++ +FR+M G+ N +Y LI G ++ + A +M+ G
Sbjct: 406 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH 465
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLK 305
PN+ T+ L+DGLC+ + KA V L+
Sbjct: 466 PNILTYNILLDGLCKNGKLAKAMVVFEYLQ 495
Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 82/154 (53%), Gaps = 3/154 (1%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+E E+F++M + GL+ N V ++ G + A +F M G P ++ Y +
Sbjct: 415 EEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 474
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+DG CK K A +F +Q + + P+ ++YN++I+G+ K K+E+ E + G
Sbjct: 475 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGV 534
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
SPNV + ++ G CR+ E+A S++ +KE G
Sbjct: 535 SPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+A + M E + PN V A++D K+G + EA KL+ M ++ P++ Y+++
Sbjct: 310 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 369
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
++GFC + D+AK +F M S PN +Y+ LI+G K ++EE +E EM + G
Sbjct: 370 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGL 429
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
N T+ L+ G + R + AQ V + G
Sbjct: 430 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 463
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 81/148 (54%), Gaps = 5/148 (3%)
Query: 157 PQEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTI-PEVVIYT 212
EA + +M + G P+ V +++GLCK G I A+ L M EKG I +VVIY
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYN 262
Query: 213 AVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEA 272
++DG CK + DDA +F +M + GI P+ F+Y+ LI L + +A +M+E
Sbjct: 263 TIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER 322
Query: 273 GHSPNVTTFVGLVDGLCRERGVEKAQSV 300
+PNV TF L+D +E + +A+ +
Sbjct: 323 KINPNVVTFSALIDAFVKEGKLVEAEKL 350
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 80/153 (52%), Gaps = 3/153 (1%)
Query: 160 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A +FK+M G+ PN + +LDGLCK+G + +AM +F ++ P++ Y +++
Sbjct: 452 AQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIE 511
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
G CKA K +D +F + G++PN +YN +I G + EEA +M E G P
Sbjct: 512 GMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLP 571
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
N T+ L+ R+ E + +I ++ GF
Sbjct: 572 NSGTYNTLIRARLRDGDREASAELIKEMRSCGF 604
Score = 78.2 bits (191), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 82/157 (52%), Gaps = 3/157 (1%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
+A +F +M G+ P+ +++ LC G +A +L M E+ P VV ++A++
Sbjct: 276 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 335
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
D F K K +A++++ +M I P+ F+Y+ LI G ++L+EA M+
Sbjct: 336 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 395
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVN 312
PNV T+ L+ G C+ + VE+ + + ++G + N
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGN 432
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 3/151 (1%)
Query: 160 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A + KKM++ + + V ++DGLCK + +A+ LF M KG P+V Y++++
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
C ++ DA R+ M I PN +++ LI K KL EA + EM++ P
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 361
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEK 307
++ T+ L++G C +++A+ + + K
Sbjct: 362 DIFTYSSLINGFCMHDRLDEAKHMFELMISK 392
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 77/137 (56%), Gaps = 1/137 (0%)
Query: 180 LDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGI 239
++ C+ + A+ + M + G P++V +++++G+C +++ DA + +M G
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 240 APNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQS 299
P+ F++ LI GL+ NK EAV +M++ G P++ T+ +V+GLC+ ++ A S
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 300 VIATLKEKGFLVNDKAV 316
++ + EKG + D +
Sbjct: 245 LLKKM-EKGKIEADVVI 260
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 3/157 (1%)
Query: 154 SEPPQEADEIFKKMKETGLIPNA---VAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVI 210
S+ +A + +M E G P+ ++ GL EA+ L M ++G P++V
Sbjct: 166 SKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVT 225
Query: 211 YTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEML 270
Y VV+G CK D A + +KM+ I + YN +I GL K +++A+ EM
Sbjct: 226 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMD 285
Query: 271 EAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEK 307
G P+V T+ L+ LC A +++ + E+
Sbjct: 286 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER 322
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 78/142 (54%), Gaps = 4/142 (2%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
+A +F+ ++ + + P+ M++G+CK G +++ +LF + KG P V+ Y ++
Sbjct: 486 KAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMI 545
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
GFC+ ++A + +KM+ +G PN+ +YN LI+ + E + E EM G +
Sbjct: 546 SGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFA 605
Query: 276 PNVTTFVGLVDGLCRERGVEKA 297
+ +T +GLV + + ++K+
Sbjct: 606 GDAST-IGLVTNMLHDGRLDKS 626
Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 65/121 (53%)
Query: 189 IQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNL 248
+ +A+ LFG M + P +V + ++ K KF+ + +MQ+ GI+ + ++Y++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 249 LIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
I + ++L A+ +M++ G+ P++ T L++G C + + A +++ + E G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 309 F 309
+
Sbjct: 184 Y 184
Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 3/153 (1%)
Query: 160 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A + KM + G P+ V ++L+G C I +A+ L M E G P+ +T ++
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
G K +A + +M G P+ +Y ++ GL K ++ A+ +M +
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 256
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
+V + ++DGLC+ + ++ A ++ + KG
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI 289
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 76/172 (44%), Gaps = 4/172 (2%)
Query: 140 GQRQEQKPNRNEPISEPPQEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLF 196
G +E NR I + D +F M ++ P+ V +L + K + + L
Sbjct: 48 GDYREILRNRLSDIIKVDDAVD-LFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLG 106
Query: 197 GLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKC 256
M+ G ++ Y+ ++ FC+ + A + KM G P+ + + L+ G
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166
Query: 257 NKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
++ +AV +M+E G+ P+ TF L+ GL +A +++ + ++G
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Score = 39.7 bits (91), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%)
Query: 223 KFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFV 282
K DDA +F M + P+ +N L+ + K NK E + +M G S ++ T+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 283 GLVDGLCRERGVEKAQSVIATLKEKGF 309
++ CR + A +V+A + + G+
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGY 149
>sp|Q9LER0|PP381_ARATH Pentatricopeptide repeat-containing protein At5g14770,
mitochondrial OS=Arabidopsis thaliana GN=At5g14770 PE=2
SV=2
Length = 940
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 3/167 (1%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+EA++ FK + E +PN V A++DGLCK G + A + M EK IP VV Y+++
Sbjct: 348 REAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSM 407
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
++G+ K ++A + RKM+ + PN F+Y +I GL+K K E A+E EM G
Sbjct: 408 INGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGV 467
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVREFLD 321
N LV+ L R +++ + ++ + KG ++ +D
Sbjct: 468 EENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLID 514
Score = 85.1 bits (209), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 3/158 (1%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+E ++ M +G P+ V ++++ LCK G + E L M E P V YT +
Sbjct: 243 HAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTL 302
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
VD KA + A ++ +M GI + Y +L+ GL+K L EA + +LE
Sbjct: 303 VDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQ 362
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVN 312
PNV T+ LVDGLC+ + A+ +I + EK + N
Sbjct: 363 VPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPN 400
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 72/134 (53%), Gaps = 3/134 (2%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+ A ++ +M G+ + V ++DGL K G ++EA K F ++ E +P VV YTA+
Sbjct: 313 RHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTAL 372
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
VDG CKA A+ I +M + PN +Y+ +I G K LEEAV +M +
Sbjct: 373 VDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNV 432
Query: 275 SPNVTTFVGLVDGL 288
PN T+ ++DGL
Sbjct: 433 VPNGFTYGTVIDGL 446
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 82/152 (53%), Gaps = 3/152 (1%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
E + ++M+E + PN V ++D L K + + A+ L+ M +G ++V+YT ++
Sbjct: 279 EGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLM 338
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
DG KA +A++ F+ + + PN +Y L+ GL K L A +MLE
Sbjct: 339 DGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVI 398
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEK 307
PNV T+ +++G ++ +E+A S++ ++++
Sbjct: 399 PNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQ 430
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 3/141 (2%)
Query: 153 ISEPPQEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVV 209
+ ++A + M E G+ PN ++ GL GLI+E K M+ +G P+
Sbjct: 727 VGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDF 786
Query: 210 IYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEM 269
Y A++ G K + I+ +M ++G+ P +YN+LI K+ +A E EM
Sbjct: 787 TYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEM 846
Query: 270 LEAGHSPNVTTFVGLVDGLCR 290
+ G SPN +T+ ++ GLC+
Sbjct: 847 GKRGVSPNTSTYCTMISGLCK 867
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 7/144 (4%)
Query: 178 AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSN 237
++ GLC+ GL EA + M + G +P+ V Y ++DGFCK F AK + ++
Sbjct: 168 TVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISE- 226
Query: 238 GIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKA 297
N ++ +L+ Y + +EEA +M+ +G P+V TF +++ LC+ V +
Sbjct: 227 ---LNLITHTILLSSYYNLHAIEEAYR---DMVMSGFDPDVVTFSSIINRLCKGGKVLEG 280
Query: 298 QSVIATLKEKGFLVNDKAVREFLD 321
++ ++E N +D
Sbjct: 281 GLLLREMEEMSVYPNHVTYTTLVD 304
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 77/165 (46%), Gaps = 10/165 (6%)
Query: 154 SEPPQEADEIFKKMKETGLIPNAV--------AMLDGLCKDGLIQEAMKLFGLMREKGTI 205
S + AD IFK ET L+ + ++ LCK G+ ++A + G M +G I
Sbjct: 655 SSKHKRADAIFKT-HET-LLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFI 712
Query: 206 PEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEY 265
P+ V + +++ G+ A + M GI+PN +YN +I+GL ++E ++
Sbjct: 713 PDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKW 772
Query: 266 CIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFL 310
EM G P+ T+ L+ G + ++ + ++ + G +
Sbjct: 773 LSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLV 817
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 74/155 (47%), Gaps = 3/155 (1%)
Query: 157 PQEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTA 213
++A + M+ G IP+ V +++ G +++A+ + +M E G P V Y
Sbjct: 696 TKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNT 755
Query: 214 VVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAG 273
++ G A + + +M+S G+ P+ F+YN LI G K ++ ++ EM+ G
Sbjct: 756 IIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADG 815
Query: 274 HSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
P +T+ L+ + +A+ ++ + ++G
Sbjct: 816 LVPKTSTYNVLISEFANVGKMLQARELLKEMGKRG 850
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 68/140 (48%), Gaps = 4/140 (2%)
Query: 186 DGLIQEAMKL-FGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAF 244
+GL+ + + L + M G P+V ++ FCK + A + R + I+ +
Sbjct: 108 NGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLR---NRVISIDTV 164
Query: 245 SYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATL 304
+YN +I GL + +EA ++ EM++ G P+ ++ L+DG C+ +A++++ +
Sbjct: 165 TYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEI 224
Query: 305 KEKGFLVNDKAVREFLDKKA 324
E + + + + + A
Sbjct: 225 SELNLITHTILLSSYYNLHA 244
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 70/154 (45%), Gaps = 3/154 (1%)
Query: 160 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
AD +K M+E G+ P+ M++ K G + +KL+ M+ G P ++ VV
Sbjct: 559 ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVG 618
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
C+ K ++A I +M I PN +Y + + K + + + +L G
Sbjct: 619 MLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKL 678
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFL 310
+ + L+ LC+ +KA V+ ++ +GF+
Sbjct: 679 SRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFI 712
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 4/127 (3%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+ A E+ K+M+ G+ N A+++ L + G I+E L M KG + + YT++
Sbjct: 453 EMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSL 512
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+D F K + A +MQ G+ + SYN+LI G+ K K+ Y M E G
Sbjct: 513 IDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYK-GMREKGI 571
Query: 275 SPNVTTF 281
P++ TF
Sbjct: 572 EPDIATF 578
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 167 MKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQK 223
M+E G+ + V+ ++ G+ K G + G MREKG P++ + +++ K
Sbjct: 532 MQERGMPWDVVSYNVLISGMLKFGKVGADWAYKG-MREKGIEPDIATFNIMMNSQRKQGD 590
Query: 224 FDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTF 281
+ +++ KM+S GI P+ S N+++ L + K+EEA+ +M+ PN+TT+
Sbjct: 591 SEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTY 648
Score = 37.0 bits (84), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 6/181 (3%)
Query: 158 QEADEIFKKMKETGLI---PNAVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+E + K M G+ N +++D K G + A+ M+E+G +VV Y +
Sbjct: 488 KEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVL 547
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+ G K K A ++ M+ GI P+ ++N+++ K E ++ +M G
Sbjct: 548 ISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGI 606
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVREFLDKKAPFSSSVWEAI 334
P++ + +V LC +E+A ++ + N R FLD + + +AI
Sbjct: 607 KPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRA--DAI 664
Query: 335 F 335
F
Sbjct: 665 F 665
>sp|Q9LVD3|PP434_ARATH Pentatricopeptide repeat-containing protein At5g57250,
mitochondrial OS=Arabidopsis thaliana GN=At5g57250 PE=2
SV=2
Length = 971
Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 91/162 (56%), Gaps = 8/162 (4%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA +F ++ GL+P+ V ++D LCK+GL +A KL M KG +P ++IY ++V
Sbjct: 708 EALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIV 767
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
DG+CK + +DA R+ + + P+AF+ + +I+G K +EEA+ E + S
Sbjct: 768 DGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNIS 827
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVR 317
+ F+ L+ G C + +E+A+ ++ + LV++ V+
Sbjct: 828 ADFFGFLFLIKGFCTKGRMEEARGLL-----REMLVSESVVK 864
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 3/143 (2%)
Query: 168 KETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKF 224
K G+ N + ++++GLC+ G + EA++LF + G +P V Y ++D CK F
Sbjct: 682 KSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLF 741
Query: 225 DDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGL 284
DA+++ M S G+ PN YN ++ G K + E+A+ + +P+ T +
Sbjct: 742 LDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSM 801
Query: 285 VDGLCRERGVEKAQSVIATLKEK 307
+ G C++ +E+A SV K+K
Sbjct: 802 IKGYCKKGDMEEALSVFTEFKDK 824
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 79/139 (56%), Gaps = 3/139 (2%)
Query: 165 KKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKA 221
++M E G+ + V+ ++DGL K+G ++EA+ L G M ++G P ++ YTA++ G CK
Sbjct: 266 REMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKM 325
Query: 222 QKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTF 281
K ++A +F ++ S GI + F Y LI G+ + L A +M + G P++ T+
Sbjct: 326 GKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTY 385
Query: 282 VGLVDGLCRERGVEKAQSV 300
+++GLC V +A V
Sbjct: 386 NTVINGLCMAGRVSEADEV 404
Score = 71.6 bits (174), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 68/130 (52%)
Query: 173 IPNAVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFR 232
+ + +++GLCK+G + +A+ L + +G + Y ++++G C+ +A R+F
Sbjct: 655 VIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFD 714
Query: 233 KMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRER 292
+++ G+ P+ +Y +LI L K +A + M+ G PN+ + +VDG C+
Sbjct: 715 SLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLG 774
Query: 293 GVEKAQSVIA 302
E A V++
Sbjct: 775 QTEDAMRVVS 784
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 70/130 (53%)
Query: 180 LDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGI 239
+ G K G + +A+ M EKG +VV Y+ ++DG K ++A + KM G+
Sbjct: 249 IHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGV 308
Query: 240 APNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQS 299
PN +Y +I+GL K KLEEA +L G + +V L+DG+CR+ + +A S
Sbjct: 309 EPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFS 368
Query: 300 VIATLKEKGF 309
++ ++++G
Sbjct: 369 MLGDMEQRGI 378
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 84/169 (49%), Gaps = 4/169 (2%)
Query: 157 PQEADEIFKKMKETG-LIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYT 212
P+ A F+ ++G L+PN V ++ LC+ G + E L + ++G + V Y+
Sbjct: 187 PELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYS 246
Query: 213 AVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEA 272
+ G+ K DA R+M G+ + SY++LI GL K +EEA+ +M++
Sbjct: 247 NWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKE 306
Query: 273 GHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVREFLD 321
G PN+ T+ ++ GLC+ +E+A + + G V++ +D
Sbjct: 307 GVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLID 355
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 12/161 (7%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EAD +++ M E L P+ M+ G CK G I+EA+++F +R K ++ V Y ++
Sbjct: 465 EADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELR-KSSVSAAVCYNRII 523
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
D CK D A + ++ G+ + + L+ ++ N ++ + + LE
Sbjct: 524 DALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHA-NGGDKGILGLVYGLE---Q 579
Query: 276 PNVTTFVGLVDG----LCRERGVEKAQSVIATLKEKGFLVN 312
N +G+++ LC+ E A V ++ KG V
Sbjct: 580 LNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVT 620
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 37/176 (21%)
Query: 171 GLIPNAVAMLDGLCKDGLIQEAMKLFGLMREKG---TIP--------------------- 206
G++ +A+ +L CK G + A++++ +MR KG T P
Sbjct: 587 GMLNDAILLL---CKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVV 643
Query: 207 ----------EVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKC 256
+V+ YT +++G CK A + +S G+ N +YN LI GL +
Sbjct: 644 NAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQ 703
Query: 257 NKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVN 312
L EA+ + G P+ T+ L+D LC+E A+ ++ ++ KG + N
Sbjct: 704 GCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPN 759
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 87/199 (43%), Gaps = 44/199 (22%)
Query: 160 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A + M++ G+ P+ + +++GLC G + EA ++ KG + +V+ Y+ ++D
Sbjct: 366 AFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLD 420
Query: 217 GFCKAQKFD-----------------------------------DAKRIFRKMQSNGIAP 241
+ K Q D +A ++R M + P
Sbjct: 421 SYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTP 480
Query: 242 NAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVI 301
+ +Y +I+G K ++EEA+E E+ ++ S V + ++D LC++ ++ A V+
Sbjct: 481 DTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAV-CYNRIIDALCKKGMLDTATEVL 539
Query: 302 ATLKEKGFLVNDKAVREFL 320
L EKG ++ R L
Sbjct: 540 IELWEKGLYLDIHTSRTLL 558
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 36/135 (26%)
Query: 210 IYTAVVDGFCKAQKFDDAKRIFRKMQSNGI-APNAFSYNLLIQGLYKCNKLEEAVEY--- 265
+ +AV+ GFCK K + A F +G+ PN +Y L+ L + K++E +
Sbjct: 173 VCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRR 232
Query: 266 ---------CI-----------------------EMLEAGHSPNVTTFVGLVDGLCRERG 293
C+ EM+E G + +V ++ L+DGL +E
Sbjct: 233 LEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGN 292
Query: 294 VEKAQSVIATLKEKG 308
VE+A ++ + ++G
Sbjct: 293 VEEALGLLGKMIKEG 307
>sp|Q9M316|PP292_ARATH Pentatricopeptide repeat-containing protein At3g61520,
mitochondrial OS=Arabidopsis thaliana GN=At3g61520 PE=2
SV=1
Length = 766
Score = 92.0 bits (227), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 81/156 (51%), Gaps = 4/156 (2%)
Query: 158 QEADEIFKKMK-ETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTA 213
+EA+E+ +MK E PNAV ++DG C+ G ++ A ++ M+E P VV
Sbjct: 387 KEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNT 446
Query: 214 VVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAG 273
+V G C+ + A F M+ G+ N +Y LI + +E+A+ + +MLEAG
Sbjct: 447 IVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAG 506
Query: 274 HSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
SP+ + L+ GLC+ R A V+ LKE GF
Sbjct: 507 CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGF 542
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 88/165 (53%), Gaps = 10/165 (6%)
Query: 154 SEPPQEADEIFKKMK----ETGLIPNAVA-----MLDGLCKDGLIQEAMKLFGLMR-EKG 203
S EA E+F+KM+ + G + A + ++DGLCK G ++EA +L M+ E+
Sbjct: 342 SRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEER 401
Query: 204 TIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAV 263
P V Y ++DG+C+A K + AK + +M+ + I PN + N ++ G+ + + L AV
Sbjct: 402 CAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAV 461
Query: 264 EYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
+ ++M + G NV T++ L+ C VEKA + E G
Sbjct: 462 VFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAG 506
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 103/225 (45%), Gaps = 28/225 (12%)
Query: 108 SPDGVQSDENFLDQFKLAIDKKPGNPQQNESLGQRQEQKPNRNEPISEPPQEA------- 160
S GV + +L +F ++ K N + N + + N+ P+ PP A
Sbjct: 251 SSHGVSPNSVWLTRFISSLCK---NARANAAWDILSDLMKNKT-PLEAPPFNALLSCLGR 306
Query: 161 -------DEIFKKMKETGLIPNAVAM---LDGLCKDGLIQEAMKLFGLMREKGTIPEVVI 210
+++ KM E + P+ V + ++ LCK + EA+++F MR K T VI
Sbjct: 307 NMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVI 366
Query: 211 ------YTAVVDGFCKAQKFDDAKRIFRKMQ-SNGIAPNAFSYNLLIQGLYKCNKLEEAV 263
+ ++DG CK + +A+ + +M+ APNA +YN LI G + KLE A
Sbjct: 367 KADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAK 426
Query: 264 EYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
E M E PNV T +V G+CR G+ A ++++G
Sbjct: 427 EVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG 471
Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 3/149 (2%)
Query: 164 FKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCK 220
F M++ G+ N V ++ C +++AM + M E G P+ IY A++ G C+
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 221 AQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTT 280
++ DA R+ K++ G + + +YN+LI N E+ E +M + G P+ T
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSIT 583
Query: 281 FVGLVDGLCRERGVEKAQSVIATLKEKGF 309
+ L+ + + E + ++ ++E G
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGL 612
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 3/154 (1%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+ A E+ +MKE + PN V ++ G+C+ + A+ F M ++G VV Y +
Sbjct: 423 ETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTL 482
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+ C + A + KM G +P+A Y LI GL + + +A+ ++ E G
Sbjct: 483 IHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGF 542
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
S ++ + L+ C + EK ++ ++++G
Sbjct: 543 SLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEG 576
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 5/130 (3%)
Query: 164 FKKMKETGLIPNA---VAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCK 220
++KM E G P+A A++ GLC+ +A+++ ++E G +++ Y ++ FC
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD 558
Query: 221 AQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIE-MLEAGHSPNVT 279
+ + M+ G P++ +YN LI K +K E+VE +E M E G P VT
Sbjct: 559 KNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGK-HKDFESVERMMEQMREDGLDPTVT 617
Query: 280 TFVGLVDGLC 289
T+ ++D C
Sbjct: 618 TYGAVIDAYC 627
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 4/135 (2%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTI-PEVVIYTA 213
+ + + ++M+E GL P A++D C G + EA+KLF M + P VIY
Sbjct: 598 ESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNI 657
Query: 214 VVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAG 273
+++ F K F A + +M+ + PN +YN L + L + + E ++ EM+E
Sbjct: 658 LINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQS 717
Query: 274 HSPNVTTFVGLVDGL 288
PN T L++ L
Sbjct: 718 CEPNQITMEILMERL 732
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 7/164 (4%)
Query: 149 RNEPISEPPQEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQE--AMKLFGLMREKG 203
RN + + + DE+ +K E+ PN + +L + K L+ E + L G
Sbjct: 197 RNGLVDDAFKVLDEMLQK--ESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHG 254
Query: 204 TIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAV 263
P V T + CK + + A I + N A +N L+ L + +
Sbjct: 255 VSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMN 314
Query: 264 EYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEK 307
+ ++M E P+V T L++ LC+ R V++A V ++ K
Sbjct: 315 DLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGK 358
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 92.0 bits (227), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 3/155 (1%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
+A ++ KM+E G P+ V ++DG CK GL+ +A++LF M G + V Y ++V
Sbjct: 157 DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV 216
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
G C + ++ DA R+ R M I PN ++ +I K K EA++ EM
Sbjct: 217 AGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD 276
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFL 310
P+V T+ L++GLC V++A+ ++ + KG L
Sbjct: 277 PDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL 311
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 83/143 (58%), Gaps = 6/143 (4%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
EA +++++M + P+ ++++GLC G + EA ++ LM KG +P+VV Y +
Sbjct: 261 SEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTL 320
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
++GFCK+++ D+ ++FR+M G+ + +YN +IQG ++ + + A E M
Sbjct: 321 INGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DS 377
Query: 275 SPNVTTFVGLVDGLCRERGVEKA 297
PN+ T+ L+ GLC VEKA
Sbjct: 378 RPNIRTYSILLYGLCMNWRVEKA 400
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 90/158 (56%), Gaps = 4/158 (2%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
+A E+F +M+ G+ +AV +++ GLC G +A +L M + +P V+ +TAV+
Sbjct: 192 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 251
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
D F K KF +A +++ +M + P+ F+YN LI GL +++EA + M+ G
Sbjct: 252 DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL 311
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVND 313
P+V T+ L++G C+ + V++ + + ++G LV D
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG-LVGD 348
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 72/135 (53%), Gaps = 3/135 (2%)
Query: 160 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A + KM + G P+ V ++++G C+ + +A+ L M E G P+VVIY ++D
Sbjct: 123 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIID 182
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
G CK +DA +F +M+ +G+ +A +YN L+ GL + +A +M+ P
Sbjct: 183 GSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP 242
Query: 277 NVTTFVGLVDGLCRE 291
NV TF ++D +E
Sbjct: 243 NVITFTAVIDVFVKE 257
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 68/121 (56%)
Query: 189 IQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNL 248
++E + LF M + +P +V ++ V+ K++ +D +F M+ GI + +SYN+
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 249 LIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
+I L +C++ A+ +M++ G+ P+V T L++G C+ V A +++ ++E G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 309 F 309
F
Sbjct: 170 F 170
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 84/187 (44%), Gaps = 35/187 (18%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA ++ M G +P+ V +++G CK + E KLF M ++G + + + Y ++
Sbjct: 297 EAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTII 356
Query: 216 DGFCKAQKFDDAKRIFRKMQSN-----------GIAPN---------------------A 243
G+ +A + D A+ IF +M S G+ N
Sbjct: 357 QGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDI 416
Query: 244 FSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIAT 303
+YN++I G+ K +E+A + + G P+V ++ ++ G CR+R +K+ +
Sbjct: 417 TTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRK 476
Query: 304 LKEKGFL 310
++E G L
Sbjct: 477 MQEDGLL 483
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 65/131 (49%), Gaps = 3/131 (2%)
Query: 162 EIFKKMKETGL---IPNAVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGF 218
+F M+ G+ + + +++ LC+ A+ + G M + G P+VV +++++GF
Sbjct: 90 SLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGF 149
Query: 219 CKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNV 278
C+ + DA + KM+ G P+ YN +I G K + +AVE M G +
Sbjct: 150 CQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADA 209
Query: 279 TTFVGLVDGLC 289
T+ LV GLC
Sbjct: 210 VTYNSLVAGLC 220
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%)
Query: 157 PQEADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
P A EIF +M I +L GLC + +++A+ LF M++ ++ Y V+
Sbjct: 365 PDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIH 424
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGL 253
G CK +DA +FR + G+ P+ SY +I G
Sbjct: 425 GMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGF 461
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 72/154 (46%), Gaps = 3/154 (1%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+E ++F KM ++ +P+ V +L + K + LF M G ++ Y V
Sbjct: 51 EEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIV 110
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
++ C+ +F A + KM G P+ + + LI G + N++ +A++ +M E G
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGF 170
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
P+V + ++DG C+ V A + ++ G
Sbjct: 171 RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDG 204
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 91.7 bits (226), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 86/154 (55%), Gaps = 3/154 (1%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
++A E+ +M + P+ + +++ C+D + AMKL MR++G P+VV Y +
Sbjct: 221 KQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 280
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
V+G CK + D+A + M S+G PN ++N++++ + + +A + +ML G
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
SP+V TF L++ LCR+ + +A ++ + + G
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG 374
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 83/152 (54%), Gaps = 3/152 (1%)
Query: 160 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A E ++M G P+ V ML LCKDG +++A+++ + KG P ++ Y V+D
Sbjct: 398 AIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVID 457
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
G KA K A ++ +M++ + P+ +Y+ L+ GL + K++EA+++ E G P
Sbjct: 458 GLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRP 517
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
N TF ++ GLC+ R ++A + + +G
Sbjct: 518 NAVTFNSIMLGLCKSRQTDRAIDFLVFMINRG 549
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 86/156 (55%), Gaps = 3/156 (1%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
++A EI ++ G P + ++DGL K G +A+KL MR K P+ + Y+++
Sbjct: 431 EDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSL 490
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
V G + K D+A + F + + GI PNA ++N ++ GL K + + A+++ + M+ G
Sbjct: 491 VGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGC 550
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFL 310
PN T++ L++GL E ++A ++ L KG +
Sbjct: 551 KPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 86/154 (55%), Gaps = 6/154 (3%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+E + + M G +P+ + ++ G C+ G ++A K+ ++ G +P+V+ Y +
Sbjct: 119 EEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVM 178
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+ G+CKA + ++A + +M ++P+ +YN +++ L KL++A+E ML+
Sbjct: 179 ISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDC 235
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
P+V T+ L++ CR+ GV A ++ ++++G
Sbjct: 236 YPDVITYTILIEATCRDSGVGHAMKLLDEMRDRG 269
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA + M +G PN + +L +C G +A KL M KG P VV + ++
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
+ C+ A I KM +G PN+ SYN L+ G K K++ A+EY M+ G
Sbjct: 352 NFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
P++ T+ ++ LC++ VE A ++ L KG
Sbjct: 412 PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 75/141 (53%), Gaps = 3/141 (2%)
Query: 160 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A +I +KM + G PN+++ +L G CK+ + A++ M +G P++V Y ++
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
CK K +DA I ++ S G +P +YN +I GL K K +A++ EM P
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482
Query: 277 NVTTFVGLVDGLCRERGVEKA 297
+ T+ LV GL RE V++A
Sbjct: 483 DTITYSSLVGGLSREGKVDEA 503
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 82/156 (52%), Gaps = 3/156 (1%)
Query: 178 AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSN 237
+L LC G +++AM++ M ++ P+V+ YT +++ C+ A ++ +M+
Sbjct: 209 TILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDR 268
Query: 238 GIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKA 297
G P+ +YN+L+ G+ K +L+EA+++ +M +G PNV T ++ +C A
Sbjct: 269 GCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDA 328
Query: 298 QSVIATLKEKGF---LVNDKAVREFLDKKAPFSSSV 330
+ ++A + KGF +V + FL +K ++
Sbjct: 329 EKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAI 364
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 79/153 (51%), Gaps = 3/153 (1%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+A+++ M G P+ V +++ LC+ GL+ A+ + M + G P + Y +
Sbjct: 326 MDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPL 385
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+ GFCK +K D A +M S G P+ +YN ++ L K K+E+AVE ++ G
Sbjct: 386 LHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEK 307
SP + T+ ++DGL + KA ++ ++ K
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK 478
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 75/143 (52%), Gaps = 6/143 (4%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
++A +I + ++ +G +P+ + M+ G CK G I A+ + M P+VV Y +
Sbjct: 154 RKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTI 210
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+ C + K A + +M P+ +Y +LI+ + + + A++ EM + G
Sbjct: 211 LRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGC 270
Query: 275 SPNVTTFVGLVDGLCRERGVEKA 297
+P+V T+ LV+G+C+E +++A
Sbjct: 271 TPDVVTYNVLVNGICKEGRLDEA 293
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 91.7 bits (226), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 78/155 (50%), Gaps = 3/155 (1%)
Query: 159 EADEIFKKMKETGLIPNAVAM---LDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EAD++F +M E L P++ + +DG CK G +Q AM+LF M+EK +VV Y ++
Sbjct: 463 EADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLL 522
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
DGF K D AK I+ M S I P SY++L+ L L EA EM+
Sbjct: 523 DGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIK 582
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFL 310
P V ++ G CR +S + + +GF+
Sbjct: 583 PTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV 617
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 20/211 (9%)
Query: 118 FLDQFKLAI----DKKPGNPQQNESLGQRQEQKPNRNEPISEPP-----------QEADE 162
F D + L I K GN Q L Q+ ++K R + ++ A E
Sbjct: 477 FPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKE 536
Query: 163 IFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFC 219
I+ M ++P ++ +++ LC G + EA +++ M K P V+I +++ G+C
Sbjct: 537 IWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYC 596
Query: 220 KAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLE--AGHSPN 277
++ D + KM S G P+ SYN LI G + + +A +M E G P+
Sbjct: 597 RSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPD 656
Query: 278 VTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
V T+ ++ G CR+ +++A+ V+ + E+G
Sbjct: 657 VFTYNSILHGFCRQNQMKEAEVVLRKMIERG 687
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 90/194 (46%), Gaps = 8/194 (4%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
E +++F M+ ++P+ V +M+ + G + +A+ F ++E G IP+ VIYT ++
Sbjct: 358 ETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILI 417
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
G+C+ A + +M G A + +YN ++ GL K L EA + EM E
Sbjct: 418 QGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF 477
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVREFLDKKAPF-----SSSV 330
P+ T L+DG C+ ++ A + +KEK ++ LD + +
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537
Query: 331 WEAIFGKKTLQKPF 344
W + K+ L P
Sbjct: 538 WADMVSKEILPTPI 551
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 78/148 (52%), Gaps = 3/148 (2%)
Query: 163 IFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFC 219
+++++ +G+ N M++ LCKDG +++ ++EKG P++V Y ++ +
Sbjct: 222 VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYS 281
Query: 220 KAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVT 279
++A + M G +P ++YN +I GL K K E A E EML +G SP+ T
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341
Query: 280 TFVGLVDGLCRERGVEKAQSVIATLKEK 307
T+ L+ C++ V + + V + ++ +
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSR 369
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 87/167 (52%), Gaps = 3/167 (1%)
Query: 158 QEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+ A E+F +M +GL P++ ++L CK G + E K+F MR + +P++V ++++
Sbjct: 322 ERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSM 381
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
+ F ++ D A F ++ G+ P+ Y +LIQG + + A+ EML+ G
Sbjct: 382 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC 441
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVREFLD 321
+ +V T+ ++ GLC+ + + +A + + E+ + + +D
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILID 488
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 88/165 (53%), Gaps = 5/165 (3%)
Query: 153 ISEPPQEADEIFKK-MKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIY 211
++E + DE+ K +K T +I N+ M+ G C+ G + M +G +P+ + Y
Sbjct: 566 LAEAFRVWDEMISKNIKPTVMICNS--MIKGYCRSGNASDGESFLEKMISEGFVPDCISY 623
Query: 212 TAVVDGFCKAQKFDDAKRIFRKMQS--NGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEM 269
++ GF + + A + +KM+ G+ P+ F+YN ++ G + N+++EA +M
Sbjct: 624 NTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKM 683
Query: 270 LEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDK 314
+E G +P+ +T+ +++G + + +A + + ++GF +DK
Sbjct: 684 IERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDK 728
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 61/120 (50%)
Query: 178 AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSN 237
+L GLCK ++ EA KLF M E+ P+ T ++DG CK +A +F+KM+
Sbjct: 450 TILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
Query: 238 GIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKA 297
I + +YN L+ G K ++ A E +M+ P ++ LV+ LC + + +A
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEA 569
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 3/166 (1%)
Query: 158 QEADEIFKKMKETGL---IPNAVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+EA E F ++ G I A++ L + G ++ A ++ + G V +
Sbjct: 182 REAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIM 241
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
V+ CK K + ++Q G+ P+ +YN LI +EEA E M G
Sbjct: 242 VNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGF 301
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVREFL 320
SP V T+ +++GLC+ E+A+ V A + G + R L
Sbjct: 302 SPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 4/166 (2%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
++ +++E G+ P+ V ++ GL++EA +L M KG P V Y V
Sbjct: 252 EKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTV 311
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGH 274
++G CK K++ AK +F +M +G++P++ +Y L+ K + E + +M
Sbjct: 312 INGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDV 371
Query: 275 SPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVNDKAVREFL 320
P++ F ++ R ++KA ++KE G L+ D + L
Sbjct: 372 VPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG-LIPDNVIYTIL 416
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 51/99 (51%)
Query: 210 IYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEM 269
++ ++ + +A+K +A F ++S G + + N LI L + +E A E+
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 270 LEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
+G NV T +V+ LC++ +EK + ++ ++EKG
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKG 265
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 91.3 bits (225), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 79/142 (55%), Gaps = 3/142 (2%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA + + +M + + PN V ++++GLC GL+ EA K+ ++ KG P V Y ++
Sbjct: 272 EAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLI 331
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
+G+CKA++ DD +I M +G+ + F+YN L QG + K A + M+ G
Sbjct: 332 NGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVH 391
Query: 276 PNVTTFVGLVDGLCRERGVEKA 297
P++ TF L+DGLC + KA
Sbjct: 392 PDMYTFNILLDGLCDHGKIGKA 413
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 80/153 (52%), Gaps = 3/153 (1%)
Query: 159 EADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA ++ + G PNAV +++G CK + + MK+ +M G + Y +
Sbjct: 307 EAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLY 366
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
G+C+A KF A+++ +M S G+ P+ +++N+L+ GL K+ +A+ ++ ++
Sbjct: 367 QGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTV 426
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
+ T+ ++ GLC+ VE A + +L KG
Sbjct: 427 VGIITYNIIIKGLCKADKVEDAWYLFCSLALKG 459
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 82/157 (52%), Gaps = 3/157 (1%)
Query: 159 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA + ++ G PN V ++D LC+ G + A+ + M++ G P+VV Y +++
Sbjct: 167 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
+ + + RI M GI+P+ +++ LI K +L EA + EM++ +
Sbjct: 227 TRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVN 286
Query: 276 PNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFLVN 312
PN+ T+ L++GLC +++A+ V+ L KGF N
Sbjct: 287 PNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPN 323
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 72/149 (48%), Gaps = 3/149 (2%)
Query: 163 IFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFC 219
I M G+ P+ + A++D K+G + EA K + M ++ P +V Y ++++G C
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC 300
Query: 220 KAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVT 279
D+AK++ + S G PNA +YN LI G K ++++ ++ M G +
Sbjct: 301 IHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTF 360
Query: 280 TFVGLVDGLCRERGVEKAQSVIATLKEKG 308
T+ L G C+ A+ V+ + G
Sbjct: 361 TYNTLYQGYCQAGKFSAAEKVLGRMVSCG 389
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Query: 160 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A ++ K MK+ G+ P+ V +++ L G + ++ M G P+V+ ++A++D
Sbjct: 203 ALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALID 262
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
+ K + +AK+ + +M + PN +YN LI GL L+EA + ++ G P
Sbjct: 263 VYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFP 322
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
N T+ L++G C+ + V+ ++ + G
Sbjct: 323 NAVTYNTLINGYCKAKRVDDGMKILCVMSRDG 354
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
Query: 166 KMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQ 222
KM + G P+ V ++++G C EAM L + G P VVIY ++D C+
Sbjct: 139 KMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKG 198
Query: 223 KFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFV 282
+ + A + + M+ GI P+ +YN LI L+ + +M+ G SP+V TF
Sbjct: 199 QVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFS 258
Query: 283 GLVD 286
L+D
Sbjct: 259 ALID 262
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 62/119 (52%)
Query: 191 EAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLI 250
+A+ LF M E +P +V ++ ++ K K++ +FR ++ GI+ + +S+ LI
Sbjct: 62 DALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLI 121
Query: 251 QGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
+C +L A+ +M++ G P++ TF LV+G C +A S++ + G+
Sbjct: 122 DCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY 180
Score = 61.6 bits (148), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 3/173 (1%)
Query: 140 GQRQEQKPNRNEPISEPPQEADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLF 196
G+ ++ R+ S +A +F M E+ +P+ V +L + K + + LF
Sbjct: 43 GRSDYRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLF 102
Query: 197 GLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKC 256
+ G ++ +T ++D FC+ + A KM G P+ ++ L+ G
Sbjct: 103 RHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHV 162
Query: 257 NKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGF 309
N+ EA+ +++ G+ PNV + ++D LC + V A V+ +K+ G
Sbjct: 163 NRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGI 215
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 87/200 (43%), Gaps = 14/200 (7%)
Query: 95 QQSFQSPNGPRPKSPDGVQSDENFLDQFKLAIDKKPGNPQQNESLGQR---QEQKPNRNE 151
++F + R + G+ S + F D L D +P + R K N+ E
Sbjct: 38 SRAFSGRSDYRERLRSGLHSIK-FNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYE 96
Query: 152 PISEPPQEADEIFKKMKETGL---IPNAVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEV 208
+ +F+ ++ G+ + + ++D C+ + A+ G M + G P +
Sbjct: 97 AVIS-------LFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSI 149
Query: 209 VIYTAVVDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIE 268
V + ++V+GFC +F +A + ++ G PN YN +I L + ++ A++
Sbjct: 150 VTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKH 209
Query: 269 MLEAGHSPNVTTFVGLVDGL 288
M + G P+V T+ L+ L
Sbjct: 210 MKKMGIRPDVVTYNSLITRL 229
>sp|P0C8A0|PP275_ARATH Pentatricopeptide repeat-containing protein At3g49730
OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1
Length = 638
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 88/157 (56%), Gaps = 5/157 (3%)
Query: 158 QEADEIFKKMKETGLIPNA---VAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
+EA ++F+ M+E PN ++L G C++G + EA ++ M+E G P++V++T +
Sbjct: 219 KEASKVFEDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNL 277
Query: 215 VDGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNK-LEEAVEYCIEMLEAG 273
+ G+ A K DA + M+ G PN Y +LIQ L + K ++EA+ +EM G
Sbjct: 278 LSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYG 337
Query: 274 HSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFL 310
++ T+ L+ G C+ ++K SV+ +++KG +
Sbjct: 338 CEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVM 374
Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 70/133 (52%), Gaps = 3/133 (2%)
Query: 159 EADEIFKKMKETGL---IPNAVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVV 215
EA +F +M+ G I A++ G CK G+I + + MR+KG +P V Y ++
Sbjct: 325 EAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIM 384
Query: 216 DGFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHS 275
K ++F++ + KM+ G P+ YN++I+ K +++EAV EM G S
Sbjct: 385 VAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLS 444
Query: 276 PNVTTFVGLVDGL 288
P V TFV +++G
Sbjct: 445 PGVDTFVIMINGF 457
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 82/168 (48%), Gaps = 8/168 (4%)
Query: 158 QEADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAV 214
EA E+ +MKE GL P+ V +L G G + +A L MR++G P V YT +
Sbjct: 253 MEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVL 312
Query: 215 VDGFCKAQK-FDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAG 273
+ C+ +K D+A R+F +M+ G + +Y LI G K +++ +M + G
Sbjct: 313 IQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKG 372
Query: 274 HSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG----FLVNDKAVR 317
P+ T++ ++ ++ E+ +I +K +G L+ + +R
Sbjct: 373 VMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIR 420
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 65/133 (48%), Gaps = 1/133 (0%)
Query: 177 VAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQS 236
V ++ ++++A+++ M + G P+ ++ ++D CK +A ++F M+
Sbjct: 171 VVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMRE 230
Query: 237 NGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEK 296
PN + L+ G + KL EA E ++M EAG P++ F L+ G +
Sbjct: 231 K-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMAD 289
Query: 297 AQSVIATLKEKGF 309
A ++ ++++GF
Sbjct: 290 AYDLMNDMRKRGF 302
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 72/178 (40%), Gaps = 46/178 (25%)
Query: 155 EPPQEADEIFKKMKETG-----LIPNAVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVV 209
E +E E+ +KMK G LI N V L CK G ++EA++L+ M G P V
Sbjct: 391 EQFEECLELIEKMKRRGCHPDLLIYNVVIRLA--CKLGEVKEAVRLWNEMEANGLSPGVD 448
Query: 210 IYTAVVDGFCKAQKFDDAKRIFRKMQSNGI--AP-------------------------- 241
+ +++GF +A F++M S GI AP
Sbjct: 449 TFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWS 508
Query: 242 -----------NAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGL 288
N ++ + I LY ++EA YC++M+E P T+ L+ GL
Sbjct: 509 CISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGL 566
Score = 35.0 bits (79), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 231 FRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCR 290
RK I P F +L++ N +++AVE EM + G P+ F L+D LC+
Sbjct: 157 MRKTNPELIEPELFV--VLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCK 214
Query: 291 ERGVEKAQSVIATLKEK 307
V++A V ++EK
Sbjct: 215 NGSVKEASKVFEDMREK 231
>sp|Q9SJN2|PP187_ARATH Pentatricopeptide repeat-containing protein At2g36240
OS=Arabidopsis thaliana GN=At2g36240 PE=2 SV=1
Length = 497
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 76/133 (57%)
Query: 178 AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSN 237
+++G K G + +A++ + M ++ P+V + +++G+C++ KFD A +FR+M+
Sbjct: 198 TVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEK 257
Query: 238 GIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKA 297
G PN S+N LI+G K+EE V+ EM+E G + T LVDGLCRE V+ A
Sbjct: 258 GCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDA 317
Query: 298 QSVIATLKEKGFL 310
++ L K L
Sbjct: 318 CGLVLDLLNKRVL 330
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 3/154 (1%)
Query: 160 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A ++F++MKE G PN V+ ++ G G I+E +K+ M E G +VD
Sbjct: 247 ALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVD 306
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
G C+ + DDA + + + + P+ F Y L++ L NK A+E E+ + G +P
Sbjct: 307 GLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTP 366
Query: 277 NVTTFVGLVDGLCRERGVEKAQSVIATLKEKGFL 310
LV+GL + EKA + + G L
Sbjct: 367 CFIACTTLVEGLRKSGRTEKASGFMEKMMNAGIL 400
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 66/130 (50%)
Query: 179 MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNG 238
+++G C+ A+ LF M+EKG P VV + ++ GF + K ++ ++ +M G
Sbjct: 234 LINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELG 293
Query: 239 IAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQ 298
+ + +L+ GL + ++++A +++L P+ + LV+ LC E +A
Sbjct: 294 CRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAM 353
Query: 299 SVIATLKEKG 308
++ L +KG
Sbjct: 354 EMMEELWKKG 363
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%)
Query: 179 MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSNG 238
++DGLC++G + +A L + K +P Y ++V+ C K A + ++ G
Sbjct: 304 LVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKG 363
Query: 239 IAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKAQ 298
P + L++GL K + E+A + +M+ AG P+ TF L+ LC A
Sbjct: 364 QTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDAN 423
Query: 299 SVIATLKEKGF 309
+ KG+
Sbjct: 424 RLRLLASSKGY 434
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 3/132 (2%)
Query: 160 ADEIFKKMKETGLIPNAVA---MLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVD 216
A E+ +++ + G P +A +++GL K G ++A M G +P+ V + ++
Sbjct: 352 AMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLR 411
Query: 217 GFCKAQKFDDAKRIFRKMQSNGIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSP 276
C + DA R+ S G P+ +Y++L+ G K + +E EML+ P
Sbjct: 412 DLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLP 471
Query: 277 NVTTFVGLVDGL 288
++ T+ L+DGL
Sbjct: 472 DIFTYNRLMDGL 483
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 68/133 (51%)
Query: 178 AMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYTAVVDGFCKAQKFDDAKRIFRKMQSN 237
++++ LC + AM++ + +KG P + T +V+G K+ + + A KM +
Sbjct: 338 SLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNA 397
Query: 238 GIAPNAFSYNLLIQGLYKCNKLEEAVEYCIEMLEAGHSPNVTTFVGLVDGLCRERGVEKA 297
GI P++ ++NLL++ L + +A + G+ P+ TT+ LV G +E ++
Sbjct: 398 GILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEG 457
Query: 298 QSVIATLKEKGFL 310
+ ++ + +K L
Sbjct: 458 EVLVNEMLDKDML 470
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 210 IYTAVVDGFCKAQKFDDAKRIFRKMQS--NGIAPNAFSYNLLIQGLYKCNKLEEAVEYCI 267
I+ + +D +C+A+K D A F M+ +G PN YN ++ G K +++A+ +
Sbjct: 159 IFRSAIDAYCRARKMDYALLAFDTMKRLIDG-KPNVGVYNTVVNGYVKSGDMDKALRFYQ 217
Query: 268 EMLEAGHSPNVTTFVGLVDGLCRERGVEKAQSVIATLKEKG 308
M + P+V TF L++G CR + A + +KEKG
Sbjct: 218 RMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKG 258
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 135,637,463
Number of Sequences: 539616
Number of extensions: 6111840
Number of successful extensions: 36736
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 424
Number of HSP's successfully gapped in prelim test: 403
Number of HSP's that attempted gapping in prelim test: 26747
Number of HSP's gapped (non-prelim): 6472
length of query: 344
length of database: 191,569,459
effective HSP length: 118
effective length of query: 226
effective length of database: 127,894,771
effective search space: 28904218246
effective search space used: 28904218246
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)