Query 047942
Match_columns 132
No_of_seqs 122 out of 1065
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 07:51:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047942.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047942hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rtk_A 60 kDa chaperonin 2; he 100.0 3.2E-36 1.1E-40 262.0 10.6 129 1-130 328-459 (546)
2 1kp8_A Groel protein; chaperon 100.0 1.2E-35 4.2E-40 258.2 13.2 130 1-130 329-461 (547)
3 1iok_A Chaperonin 60; chaperon 100.0 2.6E-35 8.8E-40 256.1 12.7 130 1-130 330-462 (545)
4 1we3_A CPN60(groel); chaperoni 100.0 7.8E-35 2.7E-39 252.9 14.3 129 1-129 328-460 (543)
5 3p9d_C T-complex protein 1 sub 100.0 4.1E-31 1.4E-35 231.6 8.4 125 1-130 365-520 (590)
6 3p9d_B T-complex protein 1 sub 99.9 5.3E-24 1.8E-28 183.8 1.4 121 10-130 311-452 (527)
7 3iyg_Q T-complex protein 1 sub 99.9 1.1E-21 3.9E-26 168.8 10.1 88 43-130 352-444 (512)
8 3p9d_A T-complex protein 1 sub 99.8 2.7E-21 9.4E-26 168.2 8.4 86 45-130 380-470 (559)
9 3iyg_D T-complex protein 1 sub 99.8 7.5E-21 2.6E-25 164.0 10.3 87 44-130 361-452 (518)
10 3iyg_B T-complex protein 1 sub 99.8 4.4E-21 1.5E-25 165.2 7.5 93 38-130 344-445 (513)
11 3p9d_G T-complex protein 1 sub 99.8 1.8E-21 6E-26 169.1 4.7 94 37-130 359-461 (550)
12 3iyg_E T-complex protein 1 sub 99.8 2.6E-20 9E-25 160.4 11.2 84 47-130 360-448 (515)
13 3aq1_B Thermosome subunit; gro 99.8 1.3E-20 4.3E-25 162.0 8.0 86 45-130 320-410 (500)
14 3p9d_D T-complex protein 1 sub 99.8 9.3E-21 3.2E-25 163.8 7.2 86 45-130 372-462 (528)
15 3p9d_F T-complex protein 1 sub 99.8 3.1E-20 1.1E-24 161.0 9.9 84 47-130 375-466 (546)
16 1a6d_A Thermosome (alpha subun 99.8 2.8E-20 9.5E-25 161.4 9.4 86 45-130 366-456 (545)
17 3iyg_H T-complex protein 1 sub 99.8 5.3E-20 1.8E-24 158.7 10.7 84 47-130 360-448 (515)
18 1q3q_A Thermosome alpha subuni 99.8 3.1E-20 1.1E-24 161.1 9.1 86 45-130 369-459 (548)
19 3p9d_E T-complex protein 1 sub 99.8 6.2E-20 2.1E-24 159.8 10.2 85 46-130 403-491 (562)
20 3iyg_G T-complex protein 1 sub 99.8 9.9E-20 3.4E-24 156.9 10.3 84 47-130 359-447 (515)
21 3iyg_A T-complex protein 1 sub 99.8 9.4E-20 3.2E-24 157.5 10.1 85 46-130 365-454 (529)
22 1a6d_B Thermosome (beta subuni 99.8 4.5E-20 1.6E-24 159.9 7.5 86 45-130 367-457 (543)
23 3iyg_Z T-complex protein 1 sub 99.8 2E-19 6.8E-24 155.2 10.6 84 47-130 363-451 (517)
24 3p9d_H T-complex protein 1 sub 99.8 8.2E-20 2.8E-24 159.2 7.8 88 43-130 377-471 (568)
25 3ruv_A Chaperonin, CPN; double 99.8 2.2E-19 7.4E-24 155.7 8.8 83 48-130 365-452 (543)
26 3ko1_A Chaperonin; 9-fold symm 99.8 2.8E-19 9.6E-24 155.5 9.3 83 48-130 379-466 (553)
27 3m6c_A 60 kDa chaperonin 1; ch 99.6 7.1E-17 2.4E-21 124.6 4.9 49 2-50 146-194 (194)
28 3osx_A 60 kDa chaperonin; alph 99.6 2.6E-16 9E-21 121.9 5.2 48 2-49 153-200 (201)
29 4e18_B Catenin alpha-1; four h 84.1 0.85 2.9E-05 28.6 2.9 44 33-77 5-49 (59)
30 4ehp_B Catenin alpha-1; adhere 81.1 1.6 5.3E-05 30.6 3.6 62 16-77 10-75 (111)
31 2ogx_A Molybdenum storage prot 70.2 24 0.00082 27.2 8.3 45 40-87 35-84 (276)
32 3ub0_A Non-structural protein 68.7 0.82 2.8E-05 34.9 -0.5 22 16-37 38-59 (199)
33 2ap9_A NAG kinase, acetylgluta 66.8 23 0.0008 27.4 7.6 52 40-92 20-75 (299)
34 3swy_A Cyclic nucleotide-gated 66.7 6.2 0.00021 23.4 3.2 32 13-44 3-43 (46)
35 2v5h_A Acetylglutamate kinase; 65.4 11 0.00038 29.9 5.5 51 39-90 43-97 (321)
36 2rd5_A Acetylglutamate kinase- 63.2 13 0.00045 28.9 5.5 50 40-90 31-84 (298)
37 1j8b_A YBAB; hypothetical prot 59.5 17 0.0006 24.8 5.0 41 6-55 6-52 (112)
38 3d2m_A Putative acetylglutamat 59.4 11 0.00037 30.9 4.5 45 40-86 38-86 (456)
39 2bty_A Acetylglutamate kinase; 58.3 20 0.00067 27.5 5.7 52 40-92 16-71 (282)
40 3swf_A CGMP-gated cation chann 58.0 10 0.00034 24.6 3.3 27 11-46 3-29 (74)
41 2buf_A Acetylglutamate kinase; 56.9 19 0.00063 28.1 5.4 54 40-94 21-78 (300)
42 2jjx_A Uridylate kinase, UMP k 51.1 13 0.00045 28.2 3.5 43 44-86 11-63 (255)
43 1ybd_A Uridylate kinase; alpha 50.7 15 0.00052 27.2 3.8 42 46-87 8-59 (239)
44 1lq7_A Alpha3W; three helix bu 47.8 38 0.0013 20.8 4.6 25 4-28 21-45 (67)
45 4e17_B Catenin alpha-1; four h 47.7 14 0.00049 21.2 2.4 22 56-77 9-30 (40)
46 3s6g_A N-acetylglutamate kinas 46.9 1.3E+02 0.0044 25.2 9.9 72 20-94 32-108 (460)
47 3zzh_A Acetylglutamate kinase; 46.5 40 0.0014 26.8 5.8 57 33-90 33-94 (307)
48 1z9d_A Uridylate kinase, UK, U 46.3 15 0.00053 27.7 3.2 41 46-86 8-58 (252)
49 1ybx_A Conserved hypothetical 43.4 83 0.0028 22.5 6.6 39 8-55 41-85 (143)
50 2ij9_A Uridylate kinase; struc 43.3 39 0.0013 24.6 5.0 42 48-89 3-47 (219)
51 2a1f_A Uridylate kinase; PYRH, 42.4 18 0.00062 27.2 3.1 41 46-86 9-59 (247)
52 3s6k_A Acetylglutamate kinase; 39.5 80 0.0027 26.6 6.9 57 32-89 45-106 (467)
53 2a26_A Calcyclin-binding prote 38.7 61 0.0021 19.2 5.6 39 9-47 5-43 (50)
54 2j5v_A Glutamate 5-kinase; pro 38.3 1.2E+02 0.0041 24.4 7.6 42 47-88 6-56 (367)
55 2ki0_A DS119; beta-alpha-beta, 38.0 19 0.00065 19.7 1.8 20 44-63 2-23 (36)
56 2f6m_A Suppressor protein STP2 37.4 32 0.0011 21.6 3.1 26 56-81 10-35 (65)
57 2j4j_A Uridylate kinase; trans 37.4 1.2E+02 0.004 22.1 8.4 42 48-89 3-49 (226)
58 4a9a_A Ribosome-interacting GT 36.9 43 0.0015 27.2 4.7 33 11-43 9-45 (376)
59 4a7w_A Uridylate kinase; trans 36.8 36 0.0012 25.6 4.0 43 45-87 7-59 (240)
60 3ek6_A Uridylate kinase; UMPK 36.1 32 0.0011 26.0 3.6 40 46-85 10-59 (243)
61 3d40_A FOMA protein; fosfomyci 36.1 78 0.0027 24.4 5.9 49 42-90 20-80 (286)
62 2ay0_A Bifunctional PUTA prote 36.1 29 0.001 20.7 2.7 36 10-45 11-46 (58)
63 1yfs_A Alanyl-tRNA synthetase; 35.7 1.2E+02 0.0041 25.8 7.3 58 22-83 228-289 (465)
64 3twe_A Alpha4H; unknown functi 35.6 25 0.00085 18.1 2.0 10 34-43 11-20 (27)
65 2brx_A Uridylate kinase; UMP k 34.0 38 0.0013 25.4 3.7 42 47-89 21-69 (244)
66 1go4_E MAD1 (mitotic arrest de 33.6 33 0.0011 23.3 2.9 18 31-48 82-99 (100)
67 3l86_A Acetylglutamate kinase; 31.7 1.1E+02 0.0039 23.6 6.2 52 39-94 31-86 (279)
68 2va1_A Uridylate kinase; UMPK, 31.6 32 0.0011 26.0 3.0 40 46-86 25-74 (256)
69 3nwy_A Uridylate kinase; allos 31.4 39 0.0013 26.5 3.4 43 45-87 50-101 (281)
70 4igg_A Catenin alpha-1; asymme 30.2 1.3E+02 0.0045 27.3 7.0 66 12-77 196-265 (832)
71 1ysm_A Calcyclin-binding prote 29.6 98 0.0033 19.8 4.6 40 10-49 5-44 (77)
72 2p22_A Suppressor protein STP2 29.5 1.7E+02 0.0058 21.5 8.2 26 56-81 119-144 (174)
73 2gpe_A Bifunctional protein PU 28.0 54 0.0018 18.5 2.9 35 10-44 11-45 (52)
74 1nkp_B MAX protein, MYC proto- 27.9 85 0.0029 19.7 4.1 15 31-45 68-82 (83)
75 4ab7_A Protein Arg5,6, mitocho 27.7 1.5E+02 0.0051 24.9 6.6 56 33-89 33-93 (464)
76 2we5_A Carbamate kinase 1; arg 27.4 1.6E+02 0.0054 22.8 6.4 49 46-94 3-62 (310)
77 2egx_A Putative acetylglutamat 26.3 47 0.0016 25.3 3.0 36 48-87 2-41 (269)
78 2wuj_A Septum site-determining 24.9 91 0.0031 18.5 3.6 35 9-45 21-55 (57)
79 1rp3_B Anti sigma factor FLGM; 24.2 69 0.0024 20.7 3.2 30 11-40 54-83 (88)
80 3hy0_A Alanyl-tRNA synthetase; 23.0 1.7E+02 0.006 24.7 6.1 53 23-82 246-301 (441)
81 2p32_A Heat shock 70 kDa prote 22.7 64 0.0022 21.5 2.9 60 12-75 22-91 (120)
82 1gs5_A Acetylglutamate kinase; 22.3 2.4E+02 0.0082 20.9 7.3 39 47-86 4-47 (258)
83 3lof_A Heat shock 70 kDa prote 22.1 81 0.0028 20.7 3.3 62 12-76 13-83 (113)
84 1ud0_A HSC70, 70 kDa heat-shoc 22.1 66 0.0023 21.0 2.8 63 10-75 6-77 (113)
85 3ggz_E Vacuolar protein-sortin 21.3 62 0.0021 17.2 2.0 18 28-45 12-29 (29)
86 3azd_A Short alpha-tropomyosin 21.1 63 0.0022 17.8 2.1 19 9-27 5-23 (37)
87 2xze_Q Charged multivesicular 20.9 73 0.0025 18.1 2.4 14 31-44 26-39 (40)
88 1zau_A DNA ligase; AMP; HET: D 20.8 95 0.0032 25.0 3.9 41 4-44 4-55 (328)
89 2ahm_E Replicase NSP8, replica 20.6 15 0.00052 28.0 -0.8 59 17-81 40-121 (203)
90 2akf_A Coronin-1A; coiled coil 20.6 65 0.0022 17.3 2.0 11 34-44 16-26 (32)
91 4au1_A Precorrin-8X methylmuta 20.1 54 0.0019 25.3 2.2 65 9-82 28-96 (229)
No 1
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=3.2e-36 Score=262.00 Aligned_cols=129 Identities=26% Similarity=0.377 Sum_probs=124.7
Q ss_pred CEEecCCCCHHHHHHHHHHHHHHhHhhcChHHHHHHHHHHHHhcCcceEEeeCCc---chhhhHhHHHHHHHHHHHHhhc
Q 047942 1 MVILGGAGSQSAIEERHSQLRSAIELSTSGYEVKLLKQRLHYLSNTAAVFKVGPC---KLPDKLNGARLTLEAVKRTMDQ 77 (132)
Q Consensus 1 ~~ii~g~g~~~~i~~r~~~l~~~i~~~~~~~~~~~L~eRlarL~ggvavI~VGg~---Ei~erk~ri~dAlna~~aAl~~ 77 (132)
++++.|.+++++|+.|++||+++++.++|+||||+|+|||+||+||++||.|||+ +++|++++++||||++++++++
T Consensus 328 ~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~g~~atI~vrG~te~~l~E~er~l~DAl~a~r~av~~ 407 (546)
T 3rtk_A 328 TTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEE 407 (546)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4789999999999999999999999999999999999999999999999999998 9999999999999999999999
Q ss_pred cccCCchHHHHHHHHHHhhhccCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 047942 78 KIGPGAGIALLHVSKELDKLQSANVGANISIKLFQHALKVFFTPYCNSVTVYF 130 (132)
Q Consensus 78 GiVpGGG~all~a~~~L~~~~~~~~~e~~Gi~iv~~AL~~p~~~ia~NaG~~~ 130 (132)
|+|||||++++++++.|+++. .++++|+|+++|++||+.|+++||+|||+|-
T Consensus 408 giVpGGGa~e~~~s~~L~~~~-~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~ 459 (546)
T 3rtk_A 408 GIVAGGGVTLLQAAPTLDELK-LEGDEATGANIVKVALEAPLKQIAFNSGLEP 459 (546)
T ss_dssp CEEETTTHHHHTTGGGSTTSC-CCTTHHHHHHHHHHHTTHHHHHHHTTTTCCH
T ss_pred CcccCCcHHHHHHHHHHHHhc-cccHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 999999999999999999876 6789999999999999999999999999973
No 2
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=1.2e-35 Score=258.21 Aligned_cols=130 Identities=28% Similarity=0.429 Sum_probs=125.2
Q ss_pred CEEecCCCCHHHHHHHHHHHHHHhHhhcChHHHHHHHHHHHHhcCcceEEeeCCc---chhhhHhHHHHHHHHHHHHhhc
Q 047942 1 MVILGGAGSQSAIEERHSQLRSAIELSTSGYEVKLLKQRLHYLSNTAAVFKVGPC---KLPDKLNGARLTLEAVKRTMDQ 77 (132)
Q Consensus 1 ~~ii~g~g~~~~i~~r~~~l~~~i~~~~~~~~~~~L~eRlarL~ggvavI~VGg~---Ei~erk~ri~dAlna~~aAl~~ 77 (132)
++++.|.+++++|++|++||+.+++.++|+||||+|+|||+||+|++++|.|||+ +++|++++++||||++++++++
T Consensus 329 ~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl~~~r~av~~ 408 (547)
T 1kp8_A 329 TTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEE 408 (547)
T ss_dssp EEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHHHHHHHhccC
Confidence 4789999999999999999999999999999999999999999999999999998 9999999999999999999999
Q ss_pred cccCCchHHHHHHHHHHhhhccCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 047942 78 KIGPGAGIALLHVSKELDKLQSANVGANISIKLFQHALKVFFTPYCNSVTVYF 130 (132)
Q Consensus 78 GiVpGGG~all~a~~~L~~~~~~~~~e~~Gi~iv~~AL~~p~~~ia~NaG~~~ 130 (132)
|||||||+++++++..|+++...++++++|+++|++||+.|+++|++|||+|-
T Consensus 409 giVpGGGa~e~~~s~~L~~~~~~~g~~q~~i~~~a~ALe~ip~~la~NaG~d~ 461 (547)
T 1kp8_A 409 GVVAGGGVALIRVASKLADLRGQNADQNVGIKVALRAMEAPLRQIVLNCGEEP 461 (547)
T ss_dssp CEEETTTHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHTTHHHHHHHHHHTSCH
T ss_pred CEEeCCcHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 99999999999999999987655789999999999999999999999999973
No 3
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=2.6e-35 Score=256.06 Aligned_cols=130 Identities=29% Similarity=0.426 Sum_probs=125.2
Q ss_pred CEEecCCCCHHHHHHHHHHHHHHhHhhcChHHHHHHHHHHHHhcCcceEEeeCCc---chhhhHhHHHHHHHHHHHHhhc
Q 047942 1 MVILGGAGSQSAIEERHSQLRSAIELSTSGYEVKLLKQRLHYLSNTAAVFKVGPC---KLPDKLNGARLTLEAVKRTMDQ 77 (132)
Q Consensus 1 ~~ii~g~g~~~~i~~r~~~l~~~i~~~~~~~~~~~L~eRlarL~ggvavI~VGg~---Ei~erk~ri~dAlna~~aAl~~ 77 (132)
++++.|.+++++|++|++||+.+++.++|+||||+|+|||+||+|++++|.+||+ +++|++++++|||+++++++++
T Consensus 330 ~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~ 409 (545)
T 1iok_A 330 TTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQE 409 (545)
T ss_dssp EEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 4799999999999999999999999999999999999999999999999999998 9999999999999999999999
Q ss_pred cccCCchHHHHHHHHHHhhhccCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 047942 78 KIGPGAGIALLHVSKELDKLQSANVGANISIKLFQHALKVFFTPYCNSVTVYF 130 (132)
Q Consensus 78 GiVpGGG~all~a~~~L~~~~~~~~~e~~Gi~iv~~AL~~p~~~ia~NaG~~~ 130 (132)
|||||||+++++++..|+++...++++|+|+++|++||+.|+++|++|||+|-
T Consensus 410 giVpGGGa~e~~~s~~L~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~ 462 (545)
T 1iok_A 410 GIVVGGGVALVQGAKVLEGLSGANSDQDAGIAIIRRALEAPMRQIAENAGVDG 462 (545)
T ss_dssp CEEETTTHHHHHHGGGGGSCCCSSHHHHHHHHHHHHHTTHHHHHHHHHHTSCH
T ss_pred CCCCCchHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 99999999999999999987655789999999999999999999999999973
No 4
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=7.8e-35 Score=252.85 Aligned_cols=129 Identities=25% Similarity=0.392 Sum_probs=125.1
Q ss_pred CEEecCCCCHHHHHHHHHHHHHHhHhhcChHHHHHHHHHHHHhcCcceEEeeCCc---chhhhHhHHHHHHHHHHHHhhc
Q 047942 1 MVILGGAGSQSAIEERHSQLRSAIELSTSGYEVKLLKQRLHYLSNTAAVFKVGPC---KLPDKLNGARLTLEAVKRTMDQ 77 (132)
Q Consensus 1 ~~ii~g~g~~~~i~~r~~~l~~~i~~~~~~~~~~~L~eRlarL~ggvavI~VGg~---Ei~erk~ri~dAlna~~aAl~~ 77 (132)
++++.|.+++++++.|++||+.+++.++|+||||+|+|||+||+|++++|.+||+ +++|++++++|||+++++++++
T Consensus 328 ~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl~~~r~av~~ 407 (543)
T 1we3_A 328 TTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDALNATRAAVEE 407 (543)
T ss_dssp EEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4789999999999999999999999999999999999999999999999999998 9999999999999999999999
Q ss_pred cccCCchHHHHHHHHHHhhhccC-cHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 047942 78 KIGPGAGIALLHVSKELDKLQSA-NVGANISIKLFQHALKVFFTPYCNSVTVY 129 (132)
Q Consensus 78 GiVpGGG~all~a~~~L~~~~~~-~~~e~~Gi~iv~~AL~~p~~~ia~NaG~~ 129 (132)
|+|||||+++++++..|+++... ++++++|+++|++||+.|+++|++|||+|
T Consensus 408 giVpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d 460 (543)
T 1we3_A 408 GIVPGGGVTLLRAISAVEELIKKLEGDEATGAKIVRRALEEPARQIAENAGYE 460 (543)
T ss_dssp CEEETTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTHHHHHHHHHHTSC
T ss_pred CcCCCccHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 99999999999999999998764 78999999999999999999999999997
No 5
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=99.97 E-value=4.1e-31 Score=231.55 Aligned_cols=125 Identities=13% Similarity=0.091 Sum_probs=88.6
Q ss_pred CEEecCCCCHHH--------------------------HHHHHHHHHHHhHhhcChHHHHHHHHHHHHhcCcceEEeeCC
Q 047942 1 MVILGGAGSQSA--------------------------IEERHSQLRSAIELSTSGYEVKLLKQRLHYLSNTAAVFKVGP 54 (132)
Q Consensus 1 ~~ii~g~g~~~~--------------------------i~~r~~~l~~~i~~~~~~~~~~~L~eRlarL~ggvavI~VGg 54 (132)
+|++.|.++++. |++|++||+.+++.++|+||++ ++||+|||++|.+||
T Consensus 365 ~~~i~g~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~~~~~-----~~~l~ggv~tI~lrg 439 (590)
T 3p9d_C 365 FSFLDNCKEPGSGSGWSHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSGHHHHH-----HHHGSGKACTIMLRG 439 (590)
T ss_dssp CEEECC--------------------------------------------------------------CCCSCCCEEEEC
T ss_pred EEEEeCCCCccccccccccccccccchhhhhcchhhHHHHHHHHHHHHHHhccCCHHHHH-----HHhhcCCeeEEEEcC
Confidence 589999998888 9999999999999999999976 479999999999999
Q ss_pred c---chhhhHhHHHHHHHHHHHHhhc-cccCCchHHHHHHHHHHhhhcc-CcHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 047942 55 C---KLPDKLNGARLTLEAVKRTMDQ-KIGPGAGIALLHVSKELDKLQS-ANVGANISIKLFQHALKVFFTPYCNSVTVY 129 (132)
Q Consensus 55 ~---Ei~erk~ri~dAlna~~aAl~~-GiVpGGG~all~a~~~L~~~~~-~~~~e~~Gi~iv~~AL~~p~~~ia~NaG~~ 129 (132)
+ +++|++++++|||+++++++++ |+|||||+++++++..|+++.. .++++|+|+++|++||+.|+++||+|||+|
T Consensus 440 ~te~~l~E~kr~i~DAl~a~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d 519 (590)
T 3p9d_C 440 GSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAVSVKLAEKAKQLEGIQQWPYQAVADAMECIPRTLIQNAGGD 519 (590)
T ss_dssp SSTTTHHHHHHHHHHHHHHHHHHHHCCCEECTTTHHHHHHHHHHHHHHHHSCSTTHHHHHHHHHHTTHHHHHHHHTTCSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhcCCEEeCccHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9 9999999999999999999999 6999999999999999998654 378999999999999999999999999998
Q ss_pred c
Q 047942 130 F 130 (132)
Q Consensus 130 ~ 130 (132)
-
T Consensus 520 ~ 520 (590)
T 3p9d_C 520 P 520 (590)
T ss_dssp H
T ss_pred H
Confidence 3
No 6
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=99.88 E-value=5.3e-24 Score=183.81 Aligned_cols=121 Identities=15% Similarity=0.115 Sum_probs=103.9
Q ss_pred HHHHHHHHHHHHHHhHhhcChHHHHHH------------HHHHHHhcC----cceEEeeCCc---chhhhHhHHHHHHHH
Q 047942 10 QSAIEERHSQLRSAIELSTSGYEVKLL------------KQRLHYLSN----TAAVFKVGPC---KLPDKLNGARLTLEA 70 (132)
Q Consensus 10 ~~~i~~r~~~l~~~i~~~~~~~~~~~L------------~eRlarL~g----gvavI~VGg~---Ei~erk~ri~dAlna 70 (132)
...++........++-.+.++++.++| ++|+..|+| ++++|.+||+ +++|++++++||||+
T Consensus 311 ~~dle~ia~~tGa~iv~~~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrg~te~~l~E~kr~i~DAl~~ 390 (527)
T 3p9d_B 311 FEGVERLALVTGGEVVSTFDEPSKCKLGECDVIEEIMLGEQPFLKFSGCKAGEACTIVLRGATDQTLDEAERSLHDALSV 390 (527)
T ss_dssp HHHHHHHHHHTCCCCCSTTSCCTTSCEECSBCCBCCCSSSCCBCCBCSSCCSCCEECBCCTTCTTHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHhCCEEecchhhCCHHHCCCCcEEEEEEecceEEEEEECCCCCCEEEEEEcCCCHHHHHHHHHHHHHHHHH
Confidence 444555555555555555566666666 578888988 8999999999 999999999999999
Q ss_pred HHHHhhcc-ccCCchHHHHHHHHHHhhhccC-cHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 047942 71 VKRTMDQK-IGPGAGIALLHVSKELDKLQSA-NVGANISIKLFQHALKVFFTPYCNSVTVYF 130 (132)
Q Consensus 71 ~~aAl~~G-iVpGGG~all~a~~~L~~~~~~-~~~e~~Gi~iv~~AL~~p~~~ia~NaG~~~ 130 (132)
+++++++| +|||||+++++++..|+++... ++++|+|+++|++||+.|+++||+|||+|.
T Consensus 391 ~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~ 452 (527)
T 3p9d_B 391 LSQTTKETRTVLGGGCAEMVMSKAVDTEAQNIDGKKSLAVEAFARALRQLPTILADNAGFDS 452 (527)
T ss_dssp HHHHHHCCCEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCS
T ss_pred HHHHHhcCCcccCCcHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHhccCCCH
Confidence 99999999 9999999999999999987654 789999999999999999999999999984
No 7
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.86 E-value=1.1e-21 Score=168.78 Aligned_cols=88 Identities=14% Similarity=0.146 Sum_probs=83.3
Q ss_pred hcCcceEEeeCCc---chhhhHhHHHHHHHHHHHHhhcc-ccCCchHHHHHHHHHHhhhccC-cHHHHHHHHHHHHHHHH
Q 047942 43 LSNTAAVFKVGPC---KLPDKLNGARLTLEAVKRTMDQK-IGPGAGIALLHVSKELDKLQSA-NVGANISIKLFQHALKV 117 (132)
Q Consensus 43 L~ggvavI~VGg~---Ei~erk~ri~dAlna~~aAl~~G-iVpGGG~all~a~~~L~~~~~~-~~~e~~Gi~iv~~AL~~ 117 (132)
++|++++|.+||+ +++|++++++|||+++++++++| +|||||+++++++..|+++... ++++|+|+++|++||+.
T Consensus 352 ~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ 431 (512)
T 3iyg_Q 352 EDGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEA 431 (512)
T ss_pred CCCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHH
Confidence 4789999999999 99999999999999999999999 9999999999999999998654 78999999999999999
Q ss_pred HHHHHHHhcCCCc
Q 047942 118 FFTPYCNSVTVYF 130 (132)
Q Consensus 118 p~~~ia~NaG~~~ 130 (132)
|+++||+|||+|.
T Consensus 432 ip~~La~NaG~d~ 444 (512)
T 3iyg_Q 432 IPRALAENSGVKA 444 (512)
T ss_pred HHHHHHHhcCCCH
Confidence 9999999999984
No 8
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=99.84 E-value=2.7e-21 Score=168.18 Aligned_cols=86 Identities=17% Similarity=0.229 Sum_probs=81.3
Q ss_pred CcceEEeeCCc---chhhhHhHHHHHHHHHHHHhhcc-ccCCchHHHHHHHHHHhhhccC-cHHHHHHHHHHHHHHHHHH
Q 047942 45 NTAAVFKVGPC---KLPDKLNGARLTLEAVKRTMDQK-IGPGAGIALLHVSKELDKLQSA-NVGANISIKLFQHALKVFF 119 (132)
Q Consensus 45 ggvavI~VGg~---Ei~erk~ri~dAlna~~aAl~~G-iVpGGG~all~a~~~L~~~~~~-~~~e~~Gi~iv~~AL~~p~ 119 (132)
+++++|.+||+ +++|++++++|||+++++++++| +|||||+++++++..|+++... ++++|+|+++|++||+.|+
T Consensus 380 ~~~~tI~lrG~te~~l~E~kr~l~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip 459 (559)
T 3p9d_A 380 HSSSSIILRGANDYSLDEMERSLHDSLSVVKRTLESGNVVPGGGCVEAALNIYLDNFATTVGSREQLAIAEFAAALLIIP 459 (559)
T ss_dssp SCCCCEEEEESCHHHHHHHHHHHHHHHHHHHHHHTSSCEECTTTTHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhcCCEEeCccHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHHH
Confidence 67899999888 99999999999999999999999 9999999999999999998654 7899999999999999999
Q ss_pred HHHHHhcCCCc
Q 047942 120 TPYCNSVTVYF 130 (132)
Q Consensus 120 ~~ia~NaG~~~ 130 (132)
++||+|||+|.
T Consensus 460 ~~La~NaG~d~ 470 (559)
T 3p9d_A 460 KTLAVNAAKDS 470 (559)
T ss_dssp HHHHHTSSSCC
T ss_pred HHHHHHCCCCH
Confidence 99999999984
No 9
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.84 E-value=7.5e-21 Score=163.98 Aligned_cols=87 Identities=10% Similarity=0.161 Sum_probs=82.2
Q ss_pred cCcceEEeeCCc---chhhhHhHHHHHHHHHHHHhhcc-ccCCchHHHHHHHHHHhhhccC-cHHHHHHHHHHHHHHHHH
Q 047942 44 SNTAAVFKVGPC---KLPDKLNGARLTLEAVKRTMDQK-IGPGAGIALLHVSKELDKLQSA-NVGANISIKLFQHALKVF 118 (132)
Q Consensus 44 ~ggvavI~VGg~---Ei~erk~ri~dAlna~~aAl~~G-iVpGGG~all~a~~~L~~~~~~-~~~e~~Gi~iv~~AL~~p 118 (132)
++++++|.+||+ +++|++++++|||+++++++++| +|||||+++++++..|+++... ++++|+|+++|++||+.|
T Consensus 361 ~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~i 440 (518)
T 3iyg_D 361 PGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCIRAFADAMEVI 440 (518)
T ss_pred CCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEeecCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHH
Confidence 478999999998 99999999999999999999999 9999999999999999997654 789999999999999999
Q ss_pred HHHHHHhcCCCc
Q 047942 119 FTPYCNSVTVYF 130 (132)
Q Consensus 119 ~~~ia~NaG~~~ 130 (132)
+++||+|||+|.
T Consensus 441 p~~La~NaG~d~ 452 (518)
T 3iyg_D 441 PSTLAENAGLNP 452 (518)
T ss_pred HHHHHHhcCCCH
Confidence 999999999984
No 10
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=99.83 E-value=4.4e-21 Score=165.23 Aligned_cols=93 Identities=14% Similarity=0.166 Sum_probs=84.4
Q ss_pred HHHHHhcC----cceEEeeCCc---chhhhHhHHHHHHHHHHHHhhc-cccCCchHHHHHHHHHHhhhccC-cHHHHHHH
Q 047942 38 QRLHYLSN----TAAVFKVGPC---KLPDKLNGARLTLEAVKRTMDQ-KIGPGAGIALLHVSKELDKLQSA-NVGANISI 108 (132)
Q Consensus 38 eRlarL~g----gvavI~VGg~---Ei~erk~ri~dAlna~~aAl~~-GiVpGGG~all~a~~~L~~~~~~-~~~e~~Gi 108 (132)
+|+..|+| ++++|.+||+ +++|++++++|||+++++++++ |+|||||+++++++..|+++... ++++|+|+
T Consensus 344 ~~~~~~~g~~~~~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i 423 (513)
T 3iyg_B 344 DKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLASRTPGKEAVAM 423 (513)
T ss_pred eEEEEEecCCCCceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcEEeCCcHHHHHHHHHHHHHhhccCcHHHHHH
Confidence 45555664 5889999998 9999999999999999999998 89999999999999999998654 78999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCc
Q 047942 109 KLFQHALKVFFTPYCNSVTVYF 130 (132)
Q Consensus 109 ~iv~~AL~~p~~~ia~NaG~~~ 130 (132)
++|++||+.|+++||+|||+|.
T Consensus 424 ~~~a~ALe~ip~~La~NaG~d~ 445 (513)
T 3iyg_B 424 ESYAKALRMLPTIIADNAGYDS 445 (513)
T ss_pred HHHHHHHHHHHHHHHHhcCCCH
Confidence 9999999999999999999984
No 11
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=99.83 E-value=1.8e-21 Score=169.11 Aligned_cols=94 Identities=19% Similarity=0.258 Sum_probs=86.2
Q ss_pred HHHHHHhcCc----ceEEeeCCc---chhhhHhHHHHHHHHHHHHhhcc-ccCCchHHHHHHHHHHhhhccC-cHHHHHH
Q 047942 37 KQRLHYLSNT----AAVFKVGPC---KLPDKLNGARLTLEAVKRTMDQK-IGPGAGIALLHVSKELDKLQSA-NVGANIS 107 (132)
Q Consensus 37 ~eRlarL~gg----vavI~VGg~---Ei~erk~ri~dAlna~~aAl~~G-iVpGGG~all~a~~~L~~~~~~-~~~e~~G 107 (132)
++|+.+|+|+ +++|.++|+ +++|++++++|||+++++++++| +|||||+++++++..|+++... ++++|+|
T Consensus 359 ~e~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~ 438 (550)
T 3p9d_G 359 SERYNLFQGCPQAKTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNKLIVAGGGATEMEVSKCLRDYSKTIAGKQQMI 438 (550)
T ss_dssp SSCCEEEBCCTTCCCCCCCBCSSSHHHHHHHHHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTCCSTTHHH
T ss_pred CeEEEEEecCCCCceeEEEEeCCcHHHHHHHHHHHHhHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhhcCChHHHHH
Confidence 5688888885 778887777 99999999999999999999999 9999999999999999987554 7899999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCc
Q 047942 108 IKLFQHALKVFFTPYCNSVTVYF 130 (132)
Q Consensus 108 i~iv~~AL~~p~~~ia~NaG~~~ 130 (132)
+++|++||+.|+++||+|||+|-
T Consensus 439 i~~~a~ALe~ip~~La~NaG~d~ 461 (550)
T 3p9d_G 439 INAFAKALEVIPRQLCENAGFDA 461 (550)
T ss_dssp HHHHHHHHTHHHHHHHHTSCSCH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCH
Confidence 99999999999999999999984
No 12
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.82 E-value=2.6e-20 Score=160.36 Aligned_cols=84 Identities=11% Similarity=0.116 Sum_probs=77.4
Q ss_pred ceEEeeCCc---chhhhHhHHHHHHHHHHHHhhcc-ccCCchHHHHHHHHHHhhhccC-cHHHHHHHHHHHHHHHHHHHH
Q 047942 47 AAVFKVGPC---KLPDKLNGARLTLEAVKRTMDQK-IGPGAGIALLHVSKELDKLQSA-NVGANISIKLFQHALKVFFTP 121 (132)
Q Consensus 47 vavI~VGg~---Ei~erk~ri~dAlna~~aAl~~G-iVpGGG~all~a~~~L~~~~~~-~~~e~~Gi~iv~~AL~~p~~~ 121 (132)
.++|.++|. +++|++++++|||+++++++++| +|||||+++++++..|+++... ++++|+|+++|++||+.|+++
T Consensus 360 ~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~ 439 (515)
T 3iyg_E 360 AVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMA 439 (515)
T ss_pred eEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHH
Confidence 456666666 99999999999999999999999 9999999999999999997664 789999999999999999999
Q ss_pred HHHhcCCCc
Q 047942 122 YCNSVTVYF 130 (132)
Q Consensus 122 ia~NaG~~~ 130 (132)
||+|||+|.
T Consensus 440 La~NaG~d~ 448 (515)
T 3iyg_E 440 LAENSGMNP 448 (515)
T ss_pred HHHhCCCCH
Confidence 999999984
No 13
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=99.82 E-value=1.3e-20 Score=161.95 Aligned_cols=86 Identities=14% Similarity=0.137 Sum_probs=80.8
Q ss_pred CcceEEeeCCc---chhhhHhHHHHHHHHHHHHhhcc-ccCCchHHHHHHHHHHhhhccC-cHHHHHHHHHHHHHHHHHH
Q 047942 45 NTAAVFKVGPC---KLPDKLNGARLTLEAVKRTMDQK-IGPGAGIALLHVSKELDKLQSA-NVGANISIKLFQHALKVFF 119 (132)
Q Consensus 45 ggvavI~VGg~---Ei~erk~ri~dAlna~~aAl~~G-iVpGGG~all~a~~~L~~~~~~-~~~e~~Gi~iv~~AL~~p~ 119 (132)
+++++|.++|+ +++|++++++|||+++++++++| +|||||+++++++..|+++... ++++|+|+++|++||+.|+
T Consensus 320 ~~~~TI~lrG~t~~~l~E~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip 399 (500)
T 3aq1_B 320 SKAVTVLLHGGTEHVVDSLDHALNDALHVVGVVIEDGKVVVGGGSSEVELSLRLSEYASTLKGREQLAVSKFAEALEVIP 399 (500)
T ss_dssp CCCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHSEEEETTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHTTHHH
T ss_pred CceEEEEecCCcHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHH
Confidence 56889999888 99999999999999999999999 9999999999999999988653 7899999999999999999
Q ss_pred HHHHHhcCCCc
Q 047942 120 TPYCNSVTVYF 130 (132)
Q Consensus 120 ~~ia~NaG~~~ 130 (132)
++||+|||+|-
T Consensus 400 ~~La~NaG~d~ 410 (500)
T 3aq1_B 400 VALAENAGLDP 410 (500)
T ss_dssp HHHHHHTTCCH
T ss_pred HHHHHHcCCCH
Confidence 99999999973
No 14
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=99.82 E-value=9.3e-21 Score=163.81 Aligned_cols=86 Identities=13% Similarity=0.151 Sum_probs=81.8
Q ss_pred CcceEEeeCCc---chhhhHhHHHHHHHHHHHHhhcc-ccCCchHHHHHHHHHHhhhccC-cHHHHHHHHHHHHHHHHHH
Q 047942 45 NTAAVFKVGPC---KLPDKLNGARLTLEAVKRTMDQK-IGPGAGIALLHVSKELDKLQSA-NVGANISIKLFQHALKVFF 119 (132)
Q Consensus 45 ggvavI~VGg~---Ei~erk~ri~dAlna~~aAl~~G-iVpGGG~all~a~~~L~~~~~~-~~~e~~Gi~iv~~AL~~p~ 119 (132)
+++++|.+||+ +++|++++++|||+++++++++| +|||||+++++++..|+++... ++++|+|+++|++||+.|+
T Consensus 372 ~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip 451 (528)
T 3p9d_D 372 RPTVSVVIRGANNMIIDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLSKEARSMEGVQAFIWQEFASALEVIP 451 (528)
T ss_dssp CCCCEEECCCSSTTHHHHHHHHHTTTHHHHHHHHHSSCEEETTTHHHHHHHHHHHHCCTTSCHHHHTTHHHHHHHHTHHH
T ss_pred CceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCCHHHHHHHHHHHHHhhccChHHHHHHHHHHHHHHHHH
Confidence 78999999998 99999999999999999999999 9999999999999999997654 7899999999999999999
Q ss_pred HHHHHhcCCCc
Q 047942 120 TPYCNSVTVYF 130 (132)
Q Consensus 120 ~~ia~NaG~~~ 130 (132)
++||+|||+|.
T Consensus 452 ~~La~NaG~d~ 462 (528)
T 3p9d_D 452 TTLAENAGLNS 462 (528)
T ss_dssp HHHHHTTSSCH
T ss_pred HHHHHHcCCCH
Confidence 99999999984
No 15
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=99.82 E-value=3.1e-20 Score=161.02 Aligned_cols=84 Identities=23% Similarity=0.243 Sum_probs=77.9
Q ss_pred ceEEeeCCc---chhhhHhHHHHHHHHHHHHhhcc-ccCCchHHHHHHHHHHhhh---cc-CcHHHHHHHHHHHHHHHHH
Q 047942 47 AAVFKVGPC---KLPDKLNGARLTLEAVKRTMDQK-IGPGAGIALLHVSKELDKL---QS-ANVGANISIKLFQHALKVF 118 (132)
Q Consensus 47 vavI~VGg~---Ei~erk~ri~dAlna~~aAl~~G-iVpGGG~all~a~~~L~~~---~~-~~~~e~~Gi~iv~~AL~~p 118 (132)
.++|.++|+ +++|++++++|||+++++++++| +|||||+++++++..|+++ .. .++++|+|+++|++||+.|
T Consensus 375 ~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~~~~g~eq~~i~~~a~ALe~i 454 (546)
T 3p9d_F 375 SCTILIKGSTHYALAQTKDAVRDGLRAVANVLKDKNIIPGAGAFYIALSRYLRSANMNKLGAKGKTKTGIEAFAEALLVI 454 (546)
T ss_dssp CEEEECCCSCHHHHHHHHHHHHHHHHHHHHHTTSCCEEETTTHHHHHHHHHHHHHHTTTTTTTSHHHHHHHHHHHHHHHH
T ss_pred eEEEEECCCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhhhhhhcCchHHHHHHHHHHHHHHHH
Confidence 578888887 99999999999999999999999 9999999999999999983 44 3789999999999999999
Q ss_pred HHHHHHhcCCCc
Q 047942 119 FTPYCNSVTVYF 130 (132)
Q Consensus 119 ~~~ia~NaG~~~ 130 (132)
+++||+|||+|.
T Consensus 455 p~~La~NaG~d~ 466 (546)
T 3p9d_F 455 PKTLVKNSGFDP 466 (546)
T ss_dssp HHHHHTTTCCTT
T ss_pred HHHHHHHcCCCH
Confidence 999999999985
No 16
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=99.82 E-value=2.8e-20 Score=161.36 Aligned_cols=86 Identities=13% Similarity=0.119 Sum_probs=81.1
Q ss_pred CcceEEeeCCc---chhhhHhHHHHHHHHHHHHhhcc-ccCCchHHHHHHHHHHhhhccC-cHHHHHHHHHHHHHHHHHH
Q 047942 45 NTAAVFKVGPC---KLPDKLNGARLTLEAVKRTMDQK-IGPGAGIALLHVSKELDKLQSA-NVGANISIKLFQHALKVFF 119 (132)
Q Consensus 45 ggvavI~VGg~---Ei~erk~ri~dAlna~~aAl~~G-iVpGGG~all~a~~~L~~~~~~-~~~e~~Gi~iv~~AL~~p~ 119 (132)
+++++|.++|+ +++|++++++|||+++++++++| +|||||+++++++..|+++... ++++|+|+++|++||+.|+
T Consensus 366 ~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~g~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip 445 (545)
T 1a6d_A 366 PKAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKALEIIP 445 (545)
T ss_dssp SSCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTHHH
T ss_pred CceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCcCHHHHHHHHHHHHHhhccCccHHHHHHHHHHHHHHHH
Confidence 56899999998 99999999999999999999999 9999999999999999998654 7899999999999999999
Q ss_pred HHHHHhcCCCc
Q 047942 120 TPYCNSVTVYF 130 (132)
Q Consensus 120 ~~ia~NaG~~~ 130 (132)
++|++|||+|-
T Consensus 446 ~~La~NaG~d~ 456 (545)
T 1a6d_A 446 RTLAENAGIDP 456 (545)
T ss_dssp HHHHHHHTSCH
T ss_pred HHHHHHcCCCH
Confidence 99999999973
No 17
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.81 E-value=5.3e-20 Score=158.65 Aligned_cols=84 Identities=13% Similarity=0.197 Sum_probs=76.1
Q ss_pred ceEEeeCCc---chhhhHhHHHHHHHHHHHHhhc-cccCCchHHHHHHHHHHhhhccC-cHHHHHHHHHHHHHHHHHHHH
Q 047942 47 AAVFKVGPC---KLPDKLNGARLTLEAVKRTMDQ-KIGPGAGIALLHVSKELDKLQSA-NVGANISIKLFQHALKVFFTP 121 (132)
Q Consensus 47 vavI~VGg~---Ei~erk~ri~dAlna~~aAl~~-GiVpGGG~all~a~~~L~~~~~~-~~~e~~Gi~iv~~AL~~p~~~ 121 (132)
+++|.++|+ +++|++++++|||+++++++++ |+|||||+++++++..|+++... ++++|+|+++|++||+.|+++
T Consensus 360 ~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~ 439 (515)
T 3iyg_H 360 TCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQ 439 (515)
T ss_pred eEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCeecCCcHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH
Confidence 455555555 9999999999999999999998 79999999999999999987654 789999999999999999999
Q ss_pred HHHhcCCCc
Q 047942 122 YCNSVTVYF 130 (132)
Q Consensus 122 ia~NaG~~~ 130 (132)
||+|||+|.
T Consensus 440 La~NaG~d~ 448 (515)
T 3iyg_H 440 LCDNAGFDA 448 (515)
T ss_pred HHHhcCCCH
Confidence 999999984
No 18
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=99.81 E-value=3.1e-20 Score=161.12 Aligned_cols=86 Identities=15% Similarity=0.205 Sum_probs=80.7
Q ss_pred CcceEEeeCCc---chhhhHhHHHHHHHHHHHHhhcc-ccCCchHHHHHHHHHHhhhccC-cHHHHHHHHHHHHHHHHHH
Q 047942 45 NTAAVFKVGPC---KLPDKLNGARLTLEAVKRTMDQK-IGPGAGIALLHVSKELDKLQSA-NVGANISIKLFQHALKVFF 119 (132)
Q Consensus 45 ggvavI~VGg~---Ei~erk~ri~dAlna~~aAl~~G-iVpGGG~all~a~~~L~~~~~~-~~~e~~Gi~iv~~AL~~p~ 119 (132)
+++++|.++|+ +++|++++++|||+++++++++| +|||||+++++++..|+++... ++++++|+++|++||+.|+
T Consensus 369 ~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip 448 (548)
T 1q3q_A 369 PKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIP 448 (548)
T ss_dssp CSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSCEEEECTTHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTHHH
T ss_pred CCeEEEEECCCChHHHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHHHH
Confidence 56889998888 99999999999999999999999 9999999999999999987653 7899999999999999999
Q ss_pred HHHHHhcCCCc
Q 047942 120 TPYCNSVTVYF 130 (132)
Q Consensus 120 ~~ia~NaG~~~ 130 (132)
++||+|||+|-
T Consensus 449 ~~La~NaG~d~ 459 (548)
T 1q3q_A 449 KTLAENAGLDT 459 (548)
T ss_dssp HHHHHHTTCCH
T ss_pred HHHHHHcCCCH
Confidence 99999999983
No 19
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=99.81 E-value=6.2e-20 Score=159.75 Aligned_cols=85 Identities=14% Similarity=0.119 Sum_probs=76.5
Q ss_pred cceEEeeCCc--chhhhHhHHHHHHHHHHHHhhcc-ccCCchHHHHHHHHHHhhhccC-cHHHHHHHHHHHHHHHHHHHH
Q 047942 46 TAAVFKVGPC--KLPDKLNGARLTLEAVKRTMDQK-IGPGAGIALLHVSKELDKLQSA-NVGANISIKLFQHALKVFFTP 121 (132)
Q Consensus 46 gvavI~VGg~--Ei~erk~ri~dAlna~~aAl~~G-iVpGGG~all~a~~~L~~~~~~-~~~e~~Gi~iv~~AL~~p~~~ 121 (132)
+++++..|++ +++|++++++|||+++++++++| +|||||+++++++..|+++... ++++|+|+++|++||+.|+++
T Consensus 403 ~~TIllrG~te~~l~E~kr~i~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~ 482 (562)
T 3p9d_E 403 TVTCFVRGSNKMIVDEAERALHDSLCVVRNLVKDSRVVYGGGAAEVTMSLAVSEEADKQRGIDQYAFRGFAQALDTIPMT 482 (562)
T ss_dssp CCEEEEECTTTTTHHHHTHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTHHHHH
T ss_pred eEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCCcHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHH
Confidence 4454444444 99999999999999999999999 9999999999999999987654 789999999999999999999
Q ss_pred HHHhcCCCc
Q 047942 122 YCNSVTVYF 130 (132)
Q Consensus 122 ia~NaG~~~ 130 (132)
||+|||+|-
T Consensus 483 La~NaG~d~ 491 (562)
T 3p9d_E 483 LAENSGLDP 491 (562)
T ss_dssp HHHTTTSCH
T ss_pred HHHhcCCCH
Confidence 999999984
No 20
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.80 E-value=9.9e-20 Score=156.89 Aligned_cols=84 Identities=13% Similarity=0.149 Sum_probs=76.6
Q ss_pred ceEEeeCCc---chhhhHhHHHHHHHHHHHHhh-ccccCCchHHHHHHHHHHhhhccC-cHHHHHHHHHHHHHHHHHHHH
Q 047942 47 AAVFKVGPC---KLPDKLNGARLTLEAVKRTMD-QKIGPGAGIALLHVSKELDKLQSA-NVGANISIKLFQHALKVFFTP 121 (132)
Q Consensus 47 vavI~VGg~---Ei~erk~ri~dAlna~~aAl~-~GiVpGGG~all~a~~~L~~~~~~-~~~e~~Gi~iv~~AL~~p~~~ 121 (132)
+++|.++|+ +++|++++++|||++++++++ +++|||||+++++++..|+++... ++++|+|+++|++||+.||++
T Consensus 359 ~~TIllrG~t~~~l~E~er~i~Dal~~~r~~~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~eq~~i~~~a~Ale~ip~~ 438 (515)
T 3iyg_G 359 ACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRT 438 (515)
T ss_pred eEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeCCCHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHH
Confidence 567777666 999999999999999999995 579999999999999999987654 789999999999999999999
Q ss_pred HHHhcCCCc
Q 047942 122 YCNSVTVYF 130 (132)
Q Consensus 122 ia~NaG~~~ 130 (132)
||+|||+|.
T Consensus 439 La~NaG~d~ 447 (515)
T 3iyg_G 439 LIQNCGAST 447 (515)
T ss_pred HHHhcCCCH
Confidence 999999984
No 21
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.80 E-value=9.4e-20 Score=157.48 Aligned_cols=85 Identities=19% Similarity=0.192 Sum_probs=79.5
Q ss_pred cceEEeeCCc---chhhhHhHHHHHHHHHHHHhhcc-ccCCchHHHHHHHHHHhhhccC-cHHHHHHHHHHHHHHHHHHH
Q 047942 46 TAAVFKVGPC---KLPDKLNGARLTLEAVKRTMDQK-IGPGAGIALLHVSKELDKLQSA-NVGANISIKLFQHALKVFFT 120 (132)
Q Consensus 46 gvavI~VGg~---Ei~erk~ri~dAlna~~aAl~~G-iVpGGG~all~a~~~L~~~~~~-~~~e~~Gi~iv~~AL~~p~~ 120 (132)
++++|.++|+ +++|.+++++|||+++++++++| +|||||+++++++..|+++... ++++|+|+++|++||+.|++
T Consensus 365 ~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~~v~~~~iVpGGGa~E~~ls~~L~~~~~~~~g~eq~~i~~fa~ALe~ip~ 444 (529)
T 3iyg_A 365 TSASVILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPN 444 (529)
T ss_pred ceEEEEECCchHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCCcHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHH
Confidence 4788888887 99999999999999999999999 9999999999999999998664 78999999999999999999
Q ss_pred HHHHhcCCCc
Q 047942 121 PYCNSVTVYF 130 (132)
Q Consensus 121 ~ia~NaG~~~ 130 (132)
+||+|||+|.
T Consensus 445 ~La~NaG~d~ 454 (529)
T 3iyg_A 445 TLAVNAAQDS 454 (529)
T ss_pred HHHHHcCCCH
Confidence 9999999984
No 22
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=99.80 E-value=4.5e-20 Score=159.86 Aligned_cols=86 Identities=12% Similarity=0.121 Sum_probs=80.3
Q ss_pred CcceEEeeCCc---chhhhHhHHHHHHHHHHHHhhcc-ccCCchHHHHHHHHHHhhhcc-CcHHHHHHHHHHHHHHHHHH
Q 047942 45 NTAAVFKVGPC---KLPDKLNGARLTLEAVKRTMDQK-IGPGAGIALLHVSKELDKLQS-ANVGANISIKLFQHALKVFF 119 (132)
Q Consensus 45 ggvavI~VGg~---Ei~erk~ri~dAlna~~aAl~~G-iVpGGG~all~a~~~L~~~~~-~~~~e~~Gi~iv~~AL~~p~ 119 (132)
+++++|.++|+ +++|++++++|||+++++++++| +|||||+++++++..|+++.. .++++++|+++|++||+.|+
T Consensus 367 ~~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ALe~ip 446 (543)
T 1a6d_B 367 PKAVSILVRGETEHVVDEMERSITDSLHVVASALEDGAYAAGGGATAAEIAFRLRSYAQKIGGRQQLAIEKFADAIEEIP 446 (543)
T ss_dssp SSCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHTHHH
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHCCCccCCccHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHH
Confidence 56888888888 99999999999999999999999 999999999999999998765 37799999999999999999
Q ss_pred HHHHHhcCCCc
Q 047942 120 TPYCNSVTVYF 130 (132)
Q Consensus 120 ~~ia~NaG~~~ 130 (132)
++|++|||+|-
T Consensus 447 ~~La~NaG~d~ 457 (543)
T 1a6d_B 447 RALAENAGLDP 457 (543)
T ss_dssp HHHHHHHTCCH
T ss_pred HHHHHHcCCCh
Confidence 99999999973
No 23
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.80 E-value=2e-19 Score=155.18 Aligned_cols=84 Identities=20% Similarity=0.277 Sum_probs=76.8
Q ss_pred ceEEeeCCc---chhhhHhHHHHHHHHHHHHhhcc-ccCCchHHHHHHHHHHhhhccC-cHHHHHHHHHHHHHHHHHHHH
Q 047942 47 AAVFKVGPC---KLPDKLNGARLTLEAVKRTMDQK-IGPGAGIALLHVSKELDKLQSA-NVGANISIKLFQHALKVFFTP 121 (132)
Q Consensus 47 vavI~VGg~---Ei~erk~ri~dAlna~~aAl~~G-iVpGGG~all~a~~~L~~~~~~-~~~e~~Gi~iv~~AL~~p~~~ 121 (132)
.++|.++|+ +++|++++++|||+++++++++| +|||||+++++++..|+++... ++++|+|+++|++||+..|++
T Consensus 363 ~~TI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~iP~~ 442 (517)
T 3iyg_Z 363 SVTLLIKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALVKYKPSVKGRAQLGVQAFADALLIIPKV 442 (517)
T ss_pred hheeeecCCcHHHHHHHHHHHHHHHHHHHHHHhcceEecCccHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 456777776 99999999999999999999999 9999999999999999998764 789999999999999965599
Q ss_pred HHHhcCCCc
Q 047942 122 YCNSVTVYF 130 (132)
Q Consensus 122 ia~NaG~~~ 130 (132)
||+|||+|.
T Consensus 443 La~NaG~d~ 451 (517)
T 3iyg_Z 443 LAQNSGFDL 451 (517)
T ss_pred HHHHcCCCH
Confidence 999999984
No 24
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=99.79 E-value=8.2e-20 Score=159.15 Aligned_cols=88 Identities=19% Similarity=0.186 Sum_probs=81.9
Q ss_pred hcCcceEEeeCCc---chhhhHhHHHHHHHHHHHHhh---ccccCCchHHHHHHHHHHhhhccC-cHHHHHHHHHHHHHH
Q 047942 43 LSNTAAVFKVGPC---KLPDKLNGARLTLEAVKRTMD---QKIGPGAGIALLHVSKELDKLQSA-NVGANISIKLFQHAL 115 (132)
Q Consensus 43 L~ggvavI~VGg~---Ei~erk~ri~dAlna~~aAl~---~GiVpGGG~all~a~~~L~~~~~~-~~~e~~Gi~iv~~AL 115 (132)
|++++++|.++|+ +++|++++++|||++++++++ +++|||||+++++++..|+++... ++++|+|+++|++||
T Consensus 377 l~~~~~TIllrG~t~~~l~E~er~i~DAL~vvr~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~~~g~eq~~i~~fa~AL 456 (568)
T 3p9d_H 377 EISRTSTIILRGATQNNLDDIERAIDDGVAAVKGLMKPSGGKLLPGAGATEIELISRITKYGERTPGLLQLAIKQFAVAF 456 (568)
T ss_dssp SCCSSCEEEEEESCHHHHHHHHHHHHHHHHHHHHTTSTTCCCCCCTTTHHHHHHHHHHHHHHHTCCSTHHHHHHHHHHGG
T ss_pred CCCCeEEEEECCCcHHHHHHHHHHHHHHHHHHHHHhcccCCeEEeCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHH
Confidence 4678899999888 999999999999999999999 689999999999999999987654 789999999999999
Q ss_pred HHHHHHHHHhcCCCc
Q 047942 116 KVFFTPYCNSVTVYF 130 (132)
Q Consensus 116 ~~p~~~ia~NaG~~~ 130 (132)
+.|+++||+|||+|.
T Consensus 457 e~ip~~La~NaG~d~ 471 (568)
T 3p9d_H 457 EVVPRTLAETAGLDV 471 (568)
T ss_dssp GHHHHHHHHHHTCCH
T ss_pred HHHHHHHHHHcCCCH
Confidence 999999999999984
No 25
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=99.78 E-value=2.2e-19 Score=155.72 Aligned_cols=83 Identities=13% Similarity=0.191 Sum_probs=76.2
Q ss_pred eEEeeCCc---chhhhHhHHHHHHHHHHHHhhcc-ccCCchHHHHHHHHHHhhhccC-cHHHHHHHHHHHHHHHHHHHHH
Q 047942 48 AVFKVGPC---KLPDKLNGARLTLEAVKRTMDQK-IGPGAGIALLHVSKELDKLQSA-NVGANISIKLFQHALKVFFTPY 122 (132)
Q Consensus 48 avI~VGg~---Ei~erk~ri~dAlna~~aAl~~G-iVpGGG~all~a~~~L~~~~~~-~~~e~~Gi~iv~~AL~~p~~~i 122 (132)
.+|.++|+ +++|++++++|||+++++++++| +|||||+++++++..|+++... ++++|+|+++|++||+.|+++|
T Consensus 365 ~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~L 444 (543)
T 3ruv_A 365 VTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTL 444 (543)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHTHHHHHH
T ss_pred eEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHH
Confidence 34556665 99999999999999999999999 9999999999999999997654 7899999999999999999999
Q ss_pred HHhcCCCc
Q 047942 123 CNSVTVYF 130 (132)
Q Consensus 123 a~NaG~~~ 130 (132)
|+|||+|-
T Consensus 445 a~NaG~d~ 452 (543)
T 3ruv_A 445 AENAGLDA 452 (543)
T ss_dssp HHHTTCCH
T ss_pred HHhcCCCH
Confidence 99999984
No 26
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=99.78 E-value=2.8e-19 Score=155.46 Aligned_cols=83 Identities=12% Similarity=0.160 Sum_probs=76.5
Q ss_pred eEEeeCCc---chhhhHhHHHHHHHHHHHHhhcc-ccCCchHHHHHHHHHHhhhccC-cHHHHHHHHHHHHHHHHHHHHH
Q 047942 48 AVFKVGPC---KLPDKLNGARLTLEAVKRTMDQK-IGPGAGIALLHVSKELDKLQSA-NVGANISIKLFQHALKVFFTPY 122 (132)
Q Consensus 48 avI~VGg~---Ei~erk~ri~dAlna~~aAl~~G-iVpGGG~all~a~~~L~~~~~~-~~~e~~Gi~iv~~AL~~p~~~i 122 (132)
.+|.++|+ +++|++++++|||+++++++++| +|||||+++++++..|+++... ++++|+|+++|++||+.|+++|
T Consensus 379 ~TI~lrG~te~~l~E~er~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~L 458 (553)
T 3ko1_A 379 ISILIRGGLERLVDETERALRDALGTVADVIKDGRAIAGGGAVEIEIAKKLRKYAPQVGGKEQLAVEAYANALESLVSIL 458 (553)
T ss_dssp EEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeeeccHHHHHHHHHHHHHHHHHHHHHHhhcCceecCCceeEeHHHHHHHHhccccCChhHhHHHHHHHHHHhHHHHH
Confidence 35666666 99999999999999999999999 9999999999999999987654 7899999999999999999999
Q ss_pred HHhcCCCc
Q 047942 123 CNSVTVYF 130 (132)
Q Consensus 123 a~NaG~~~ 130 (132)
|+|||+|.
T Consensus 459 a~NaG~d~ 466 (553)
T 3ko1_A 459 IENAGFDP 466 (553)
T ss_dssp HHHHTSCH
T ss_pred HHhcCCCH
Confidence 99999984
No 27
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=99.65 E-value=7.1e-17 Score=124.63 Aligned_cols=49 Identities=35% Similarity=0.549 Sum_probs=47.9
Q ss_pred EEecCCCCHHHHHHHHHHHHHHhHhhcChHHHHHHHHHHHHhcCcceEE
Q 047942 2 VILGGAGSQSAIEERHSQLRSAIELSTSGYEVKLLKQRLHYLSNTAAVF 50 (132)
Q Consensus 2 ~ii~g~g~~~~i~~r~~~l~~~i~~~~~~~~~~~L~eRlarL~ggvavI 50 (132)
||++|.|++++|++||+||+.+|+.++|+||||||+||||||+||||||
T Consensus 146 ~iv~G~g~~~~I~~Rv~qIr~~ie~t~s~ydkEKLqERlAkLsGGVAVI 194 (194)
T 3m6c_A 146 VIVDGGGTAEAVANRAKHLRAEIDKSDSDWDREKLGERLAKLAGGVAVI 194 (194)
T ss_dssp EEEEECCCHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHBCCC
T ss_pred EEecCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHcCCcEEC
Confidence 7899999999999999999999999999999999999999999999986
No 28
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=99.62 E-value=2.6e-16 Score=121.92 Aligned_cols=48 Identities=35% Similarity=0.552 Sum_probs=47.0
Q ss_pred EEecCCCCHHHHHHHHHHHHHHhHhhcChHHHHHHHHHHHHhcCcceE
Q 047942 2 VILGGAGSQSAIEERHSQLRSAIELSTSGYEVKLLKQRLHYLSNTAAV 49 (132)
Q Consensus 2 ~ii~g~g~~~~i~~r~~~l~~~i~~~~~~~~~~~L~eRlarL~ggvav 49 (132)
||++|.|++++|++||+||+.+|+.++|+||||||+||||||+|||||
T Consensus 153 tIv~G~G~~~~I~~Rv~qIr~qie~t~S~ydkEKLqERLAKLsGGVAV 200 (201)
T 3osx_A 153 TIIDGVGEEGAIAARVTQIRQQIEESTSDYDREKLQERVAKLAGGVKL 200 (201)
T ss_dssp EEEEECCCHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHTCCC
T ss_pred EEecCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHcCCCcC
Confidence 789999999999999999999999999999999999999999999996
No 29
>4e18_B Catenin alpha-1; four helix bundle, cell adhesion; 2.40A {Mus musculus}
Probab=84.12 E-value=0.85 Score=28.57 Aligned_cols=44 Identities=18% Similarity=0.240 Sum_probs=30.5
Q ss_pred HHHHHHHHHHhcCcceEEeeCCc-chhhhHhHHHHHHHHHHHHhhc
Q 047942 33 VKLLKQRLHYLSNTAAVFKVGPC-KLPDKLNGARLTLEAVKRTMDQ 77 (132)
Q Consensus 33 ~~~L~eRlarL~ggvavI~VGg~-Ei~erk~ri~dAlna~~aAl~~ 77 (132)
|..|+|+|-++..|.+.|- ... --++||.+|-.-.|+++.|+.+
T Consensus 5 r~~Lee~le~Iisgaa~~A-ds~~tr~~rke~Iv~eCnavrqALQd 49 (59)
T 4e18_B 5 RPSLEERLESIISGAALMA-DSSCTRDDRRERIVAECNAVRQALQD 49 (59)
T ss_dssp CCCHHHHHHHHHHHCC-----------CHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHH-hhhccchhHHHHHHHHHHHHHHHHHH
Confidence 3468889999998877654 333 7789999999999999999876
No 30
>4ehp_B Catenin alpha-1; adherens junctions, vinculin binding site, vinculin binding helix bundle, cell adhesion; 2.66A {Homo sapiens}
Probab=81.11 E-value=1.6 Score=30.60 Aligned_cols=62 Identities=16% Similarity=0.261 Sum_probs=43.1
Q ss_pred HHHHHHHHhHhhcChHH----HHHHHHHHHHhcCcceEEeeCCcchhhhHhHHHHHHHHHHHHhhc
Q 047942 16 RHSQLRSAIELSTSGYE----VKLLKQRLHYLSNTAAVFKVGPCKLPDKLNGARLTLEAVKRTMDQ 77 (132)
Q Consensus 16 r~~~l~~~i~~~~~~~~----~~~L~eRlarL~ggvavI~VGg~Ei~erk~ri~dAlna~~aAl~~ 77 (132)
-+.++...++..+..|+ |+.|++||-.+-.|.+.+-=-+.--+++|.+|-.-.|++|.|+.+
T Consensus 10 ai~~F~~~i~~~pl~~~~~~~r~~Lee~LE~Iisgaa~~aDS~~Tr~e~RerIv~eCnavRqaLQd 75 (111)
T 4ehp_B 10 ALNNFDKQIIVDPLSFSEERFRPSLEERLESIISGAALMADSSCTRDDRRERIVAECNAVRQALQD 75 (111)
T ss_dssp ---------CCCHHHHHHHSSSCCHHHHHHHHHHHHTCSCCCCSGGGHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhcCcccccccccchhHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHH
Confidence 46667777765555565 678999999999998766533337899999999999999999988
No 31
>2ogx_A Molybdenum storage protein subunit alpha; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii}
Probab=70.17 E-value=24 Score=27.21 Aligned_cols=45 Identities=22% Similarity=0.363 Sum_probs=28.5
Q ss_pred HHHhcCcceEEeeCCcchhhh-HhHHHHHHHHHHHHhhcc----ccCCchHHH
Q 047942 40 LHYLSNTAAVFKVGPCKLPDK-LNGARLTLEAVKRTMDQK----IGPGAGIAL 87 (132)
Q Consensus 40 larL~ggvavI~VGg~Ei~er-k~ri~dAlna~~aAl~~G----iVpGGG~al 87 (132)
+.++.| .-|||+||. +.+. ..+++...+.+.... .| +|+|||...
T Consensus 35 i~~~~~-~iVIKiGGs-l~~~~~~~l~~l~~~I~~l~-~G~~vVlV~GGg~~~ 84 (276)
T 2ogx_A 35 IRLLPW-LQVVKIGGR-VMDRGADAILPLVEELRKLL-PEHRLLILTGAGVRA 84 (276)
T ss_dssp CCSSTT-EEEEEECHH-HHTTTHHHHHHHHHHHHHHT-TTCEEEEEECCTHHH
T ss_pred hhhcCC-eEEEEEChh-hcCCCHHHHHHHHHHHHHHh-CCCeEEEEECcHHHH
Confidence 334666 899999998 5543 345555555554433 45 799998554
No 32
>3ub0_A Non-structural protein 6, NSP6,; feline coronavirus, primer-independen polymerase, replication; 2.60A {Feline infectious peritonitis virus}
Probab=68.71 E-value=0.82 Score=34.89 Aligned_cols=22 Identities=23% Similarity=0.200 Sum_probs=17.8
Q ss_pred HHHHHHHHhHhhcChHHHHHHH
Q 047942 16 RHSQLRSAIELSTSGYEVKLLK 37 (132)
Q Consensus 16 r~~~l~~~i~~~~~~~~~~~L~ 37 (132)
-+.|+++....+.++||||.--
T Consensus 38 ~~Kql~KA~NIAKse~drd~av 59 (199)
T 3ub0_A 38 LLKQLTKACNIAKSEFEREASV 59 (199)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHH
Confidence 3567889999999999988643
No 33
>2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2
Probab=66.80 E-value=23 Score=27.43 Aligned_cols=52 Identities=17% Similarity=0.136 Sum_probs=32.3
Q ss_pred HHHhcCcceEEeeCCcchhhhHhHHHHHHHHHHHHhhcc----ccCCchHHHHHHHH
Q 047942 40 LHYLSNTAAVFKVGPCKLPDKLNGARLTLEAVKRTMDQK----IGPGAGIALLHVSK 92 (132)
Q Consensus 40 larL~ggvavI~VGg~Ei~erk~ri~dAlna~~aAl~~G----iVpGGG~all~a~~ 92 (132)
+.++.+...|||+||.-+.. ..+++.....+..-.+.| +|.|||..-=....
T Consensus 20 i~~~~~k~iViKlGGs~l~~-~~~~~~~~~~i~~l~~~G~~vViVhGgG~~i~~~~~ 75 (299)
T 2ap9_A 20 LKQLHGKVVVVKYGGNAMTD-DTLRRAFAADMAFLRNCGIHPVVVHGGGPQITAMLR 75 (299)
T ss_dssp HHHHTTCEEEEEECTHHHHS-HHHHHHHHHHHHHHHTTTCEEEEEECCSHHHHHHHH
T ss_pred HHHhCCCeEEEEECchhhCC-chHHHHHHHHHHHHHHCCCcEEEEECCcHHHHHHHH
Confidence 56678889999999993322 134444444444444456 79998876544333
No 34
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=66.67 E-value=6.2 Score=23.35 Aligned_cols=32 Identities=34% Similarity=0.481 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHhHhhcC-------hHH--HHHHHHHHHHhc
Q 047942 13 IEERHSQLRSAIELSTS-------GYE--VKLLKQRLHYLS 44 (132)
Q Consensus 13 i~~r~~~l~~~i~~~~~-------~~~--~~~L~eRlarL~ 44 (132)
++.+++++..-++.-.+ +|+ ..||+.||.+|.
T Consensus 3 lEekv~~Le~~ld~LqTr~ArLlae~~ssq~KlKqRit~lE 43 (46)
T 3swy_A 3 LEEKVEQLGSSLDTLQTRFARLLAEYNATQMKMKQRLSQLE 43 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555555555543322 222 367777777764
No 35
>2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transfera cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A*
Probab=65.42 E-value=11 Score=29.89 Aligned_cols=51 Identities=12% Similarity=0.077 Sum_probs=32.1
Q ss_pred HHHHhcCcceEEeeCCcchhhhHhHHHHHHHHHHHHhhcc----ccCCchHHHHHH
Q 047942 39 RLHYLSNTAAVFKVGPCKLPDKLNGARLTLEAVKRTMDQK----IGPGAGIALLHV 90 (132)
Q Consensus 39 RlarL~ggvavI~VGg~Ei~erk~ri~dAlna~~aAl~~G----iVpGGG~all~a 90 (132)
-+.++.+...||++||.-+.. +.+++...+.+..-.+.| +|.|||...=..
T Consensus 43 yi~~~~~k~iVIKlGGs~l~~-~~~~~~l~~~i~~l~~~G~~vVlVhGgG~~i~~~ 97 (321)
T 2v5h_A 43 YLQQFAGRTVVVKYGGAAMKQ-EELKEAVMRDIVFLACVGMRPVVVHGGGPEINAW 97 (321)
T ss_dssp HHHHTTTCEEEEEECTHHHHS-HHHHHHHHHHHHHHHHTTCEEEEEECCHHHHHHH
T ss_pred HHHHhCCCeEEEEECchhhCC-chHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 366788889999999993322 234444444444434445 799998865433
No 36
>2rd5_A Acetylglutamate kinase-like protein; protein-protein complex, regulation of arginine biosynthesis nitrogen metabolism, kinase, transferase, transcription; HET: ARG ADP NLG ATP; 2.51A {Arabidopsis thaliana}
Probab=63.22 E-value=13 Score=28.92 Aligned_cols=50 Identities=10% Similarity=0.068 Sum_probs=31.5
Q ss_pred HHHhcCcceEEeeCCcchhhhHhHHHHHHHHHHHHhhcc----ccCCchHHHHHH
Q 047942 40 LHYLSNTAAVFKVGPCKLPDKLNGARLTLEAVKRTMDQK----IGPGAGIALLHV 90 (132)
Q Consensus 40 larL~ggvavI~VGg~Ei~erk~ri~dAlna~~aAl~~G----iVpGGG~all~a 90 (132)
+.++.+...||++||.-+.. +.+++...+.+..-.+.| +|.|||...=..
T Consensus 31 i~~~~~k~iVIKlGGs~l~~-~~~~~~~~~~i~~l~~~G~~vViVhGgG~~i~~~ 84 (298)
T 2rd5_A 31 IQKFRGKTIVVKYGGAAMTS-PELKSSVVSDLVLLACVGLRPILVHGGGPDINRY 84 (298)
T ss_dssp HHHTTTCEEEEEECTHHHHC-HHHHHHHHHHHHHHHHTTCEEEEEECCHHHHHHH
T ss_pred HHHhcCCEEEEEECchhhCC-hhHHHHHHHHHHHHHHCCCCEEEEECCcHHHHHH
Confidence 55677889999999993322 234444444444444445 799998865333
No 37
>1j8b_A YBAB; hypothetical protein, structural genomics, structure function project, S2F, unknown function; HET: MSE; 1.75A {Haemophilus influenzae RD} SCOP: d.222.1.1 PDB: 1pug_A
Probab=59.49 E-value=17 Score=24.82 Aligned_cols=41 Identities=10% Similarity=0.281 Sum_probs=25.6
Q ss_pred CCCCHHHHHHHHHHHHHHhHhhcChHHHHHHHHHHHHhc------CcceEEeeCCc
Q 047942 6 GAGSQSAIEERHSQLRSAIELSTSGYEVKLLKQRLHYLS------NTAAVFKVGPC 55 (132)
Q Consensus 6 g~g~~~~i~~r~~~l~~~i~~~~~~~~~~~L~eRlarL~------ggvavI~VGg~ 55 (132)
|.||-..+-+..+++++++ ++++++|+..+ ||...+.+.|.
T Consensus 6 g~gnm~~mmkqaq~mQ~~m---------~~~QeeL~~~~v~g~sggG~V~Vt~~G~ 52 (112)
T 1j8b_A 6 GKGGLGGLMKQAQQMQEKM---------QKMQEEIAQLEVTGESGAGLVKITINGA 52 (112)
T ss_dssp ----CCCHHHHHHHHHHHH---------HHHHHHHTTSEEEEEEGGGTEEEEEETT
T ss_pred CccCHHHHHHHHHHHHHHH---------HHHHHHHhccEEEEEECCCEEEEEEecC
Confidence 3456667777777787777 55667776652 55667777776
No 38
>3d2m_A Putative acetylglutamate synthase; protein-COA-Glu ternary complex, transferase; HET: COA GLU; 2.21A {Neisseria gonorrhoeae} PDB: 2r8v_A* 3b8g_A* 2r98_A* 3d2p_A*
Probab=59.40 E-value=11 Score=30.91 Aligned_cols=45 Identities=11% Similarity=-0.054 Sum_probs=30.2
Q ss_pred HHHhcCcceEEeeCCcchhhhHhHHHHHHHHHHHHhhcc----ccCCchHH
Q 047942 40 LHYLSNTAAVFKVGPCKLPDKLNGARLTLEAVKRTMDQK----IGPGAGIA 86 (132)
Q Consensus 40 larL~ggvavI~VGg~Ei~erk~ri~dAlna~~aAl~~G----iVpGGG~a 86 (132)
|.++.+...||++||.-+.... ++.....+....+.| +|.|||..
T Consensus 38 i~~~~~~~iViK~GG~~l~~~~--~~~~~~~i~~l~~~g~~vvlVhggg~~ 86 (456)
T 3d2m_A 38 IRQMRGTTLVAGIDGRLLEGGT--LNKLAADIGLLSQLGIRLVLIHGAYHF 86 (456)
T ss_dssp HHHHTTCEEEEEECGGGGTSTH--HHHHHHHHHHHHHTTCEEEEEECCHHH
T ss_pred HHHhcCCEEEEEEChHHhcCch--HHHHHHHHHHHHHCCCeEEEEeCCcHH
Confidence 6788899999999999332111 444555544444556 68998875
No 39
>2bty_A Acetylglutamate kinase; N-acetyl-L-glutamate kinase, amino acid kinase, phosphoryl group transfer, arginine metabolism, transferase; HET: ARG NLG; 2.75A {Thermotoga maritima} SCOP: c.73.1.2
Probab=58.32 E-value=20 Score=27.52 Aligned_cols=52 Identities=17% Similarity=0.196 Sum_probs=31.4
Q ss_pred HHHhcCcceEEeeCCcchhhhHhHHHHHHHHHHHHhhcc----ccCCchHHHHHHHH
Q 047942 40 LHYLSNTAAVFKVGPCKLPDKLNGARLTLEAVKRTMDQK----IGPGAGIALLHVSK 92 (132)
Q Consensus 40 larL~ggvavI~VGg~Ei~erk~ri~dAlna~~aAl~~G----iVpGGG~all~a~~ 92 (132)
+.++.+...||++||.-+.. ..+++.....+..-.+.| +|.|||...=....
T Consensus 16 i~~~~~~~iViKlGGs~l~~-~~~~~~~~~~i~~l~~~G~~vVlVhGgG~~i~~~~~ 71 (282)
T 2bty_A 16 IKEFYGKTFVIKFGGSAMKQ-ENAKKAFIQDIILLKYTGIKPIIVHGGGPAISQMMK 71 (282)
T ss_dssp HHHHTTCEEEEEECSHHHHS-HHHHHHHHHHHHHHHHTTCEEEEEECCSHHHHHHHH
T ss_pred HHHhcCCeEEEEECchhhCC-hhHHHHHHHHHHHHHHCCCcEEEEECCcHHHHHHHH
Confidence 55677888999999993322 233444444444333445 79998886644333
No 40
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=58.00 E-value=10 Score=24.63 Aligned_cols=27 Identities=22% Similarity=0.455 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHhHhhcChHHHHHHHHHHHHhcCc
Q 047942 11 SAIEERHSQLRSAIELSTSGYEVKLLKQRLHYLSNT 46 (132)
Q Consensus 11 ~~i~~r~~~l~~~i~~~~~~~~~~~L~eRlarL~gg 46 (132)
..++.++.+|...+ +.|+-|+|||-+-
T Consensus 3 ~dlEEKv~~LE~sl---------d~LQTrfARLLaE 29 (74)
T 3swf_A 3 MGLEEKVTRMESSV---------DLLQTRFARILAE 29 (74)
T ss_dssp -CHHHHHHHHHHHH---------HHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHH---------HHHHHHHHHHHHH
Confidence 34677777777766 4455566665443
No 41
>2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2
Probab=56.95 E-value=19 Score=28.13 Aligned_cols=54 Identities=15% Similarity=0.063 Sum_probs=32.8
Q ss_pred HHHhcCcceEEeeCCcchhhhHhHHHHHHHHHHHHhhcc----ccCCchHHHHHHHHHH
Q 047942 40 LHYLSNTAAVFKVGPCKLPDKLNGARLTLEAVKRTMDQK----IGPGAGIALLHVSKEL 94 (132)
Q Consensus 40 larL~ggvavI~VGg~Ei~erk~ri~dAlna~~aAl~~G----iVpGGG~all~a~~~L 94 (132)
+.++.+...||++||.-+.. +..++.....+..-.+.| +|.|||...=.....+
T Consensus 21 i~~~~~k~iVIKlGGs~l~~-~~~~~~~~~~i~~l~~~G~~vVlVhGgG~~i~~~~~~~ 78 (300)
T 2buf_A 21 IRRFVGKTLVIKYGGNAMES-EELKAGFARDVVLMKAVGINPVVVHGGGPQIGDLLKRL 78 (300)
T ss_dssp HHHHTTCEEEEEECCTTTTS-SHHHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHHHHT
T ss_pred HHHhcCCeEEEEECchhhCC-chHHHHHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHc
Confidence 56678899999999993322 123444444444434445 7999988664443333
No 42
>2jjx_A Uridylate kinase, UMP kinase; structural genomics, pyrimidine biosynthesis, ATP-binding, nucleotide-binding, OPPF, PYRH, cytoplasm; HET: ATP; 2.82A {Bacillus anthracis}
Probab=51.07 E-value=13 Score=28.21 Aligned_cols=43 Identities=16% Similarity=0.147 Sum_probs=29.0
Q ss_pred cCcceEEeeCCcchhh------hHhHHHHHHHHHHHHhhcc----ccCCchHH
Q 047942 44 SNTAAVFKVGPCKLPD------KLNGARLTLEAVKRTMDQK----IGPGAGIA 86 (132)
Q Consensus 44 ~ggvavI~VGg~Ei~e------rk~ri~dAlna~~aAl~~G----iVpGGG~a 86 (132)
.+..-|||+||.-+.. ...+++...+.+....+.| +|.|||..
T Consensus 11 ~~~~iViKiGGs~l~~~~~~~~~~~~i~~~a~~I~~l~~~G~~vViV~GgG~~ 63 (255)
T 2jjx_A 11 PYKRVLIKLSGGALADQTGNSFNSKRLEHIANEILSIVDLGIEVSIVIGGGNI 63 (255)
T ss_dssp BCSEEEEEECGGGTSCSSSCSCCHHHHHHHHHHHHHHHTTTCEEEEEECCTTT
T ss_pred cCCEEEEEECHHHhCCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECchHH
Confidence 4567899999993332 2456666666666555555 79999875
No 43
>1ybd_A Uridylate kinase; alpha/beta/alpha fold, hexamer, structural genomics, structure initiative, PSI; 2.60A {Neisseria meningitidis} SCOP: c.73.1.3
Probab=50.66 E-value=15 Score=27.22 Aligned_cols=42 Identities=14% Similarity=0.154 Sum_probs=28.2
Q ss_pred cceEEeeCCcchhh------hHhHHHHHHHHHHHHhhcc----ccCCchHHH
Q 047942 46 TAAVFKVGPCKLPD------KLNGARLTLEAVKRTMDQK----IGPGAGIAL 87 (132)
Q Consensus 46 gvavI~VGg~Ei~e------rk~ri~dAlna~~aAl~~G----iVpGGG~al 87 (132)
...|||+||.-+.. ...+++...+.+....+.| +|.|||...
T Consensus 8 ~~iViK~GGs~l~~~~~~~~~~~~~~~~~~~i~~l~~~g~~vviV~GgG~~~ 59 (239)
T 1ybd_A 8 KRVLLKLSGESLMGSDPFGINHDTIVQTVGEIAEVVKMGVQVGIVVGGGNIF 59 (239)
T ss_dssp SEEEEEECGGGGGTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECCHHHH
T ss_pred CEEEEEEchHHhCCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCcHHH
Confidence 35799999993332 2456666666666655556 699998753
No 44
>1lq7_A Alpha3W; three helix bundle, de novo protein; NMR {} SCOP: k.9.1.1
Probab=47.76 E-value=38 Score=20.81 Aligned_cols=25 Identities=28% Similarity=0.526 Sum_probs=17.7
Q ss_pred ecCCCCHHHHHHHHHHHHHHhHhhc
Q 047942 4 LGGAGSQSAIEERHSQLRSAIELST 28 (132)
Q Consensus 4 i~g~g~~~~i~~r~~~l~~~i~~~~ 28 (132)
++|+|--+.+.+.-++++..|+..-
T Consensus 21 lggggrieelkkkweelkkkieelg 45 (67)
T 1lq7_A 21 LGGGGRIEELKKKWEELKKKIEELG 45 (67)
T ss_dssp SCCSSSHHHHHHHHHHHHHHHHHTT
T ss_pred hcCCccHHHHHHHHHHHHHHHHHhC
Confidence 4677777777777777777776544
No 45
>4e17_B Catenin alpha-1; four helix bundle, cell adhesion; 2.30A {Mus musculus}
Probab=47.67 E-value=14 Score=21.20 Aligned_cols=22 Identities=14% Similarity=0.196 Sum_probs=18.5
Q ss_pred chhhhHhHHHHHHHHHHHHhhc
Q 047942 56 KLPDKLNGARLTLEAVKRTMDQ 77 (132)
Q Consensus 56 Ei~erk~ri~dAlna~~aAl~~ 77 (132)
--++||.+|-.-.|+++.|+.+
T Consensus 9 tr~~rkerIv~eCnavrqALQd 30 (40)
T 4e17_B 9 TRDDRRERIVAECNAVRQALQD 30 (40)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHH
Confidence 3478999999999999999876
No 46
>3s6g_A N-acetylglutamate kinase / N-acetylglutamate SYNT; synthase, transferase; HET: COA; 2.67A {Maricaulis maris} PDB: 3s7y_A 3s6h_A*
Probab=46.93 E-value=1.3e+02 Score=25.23 Aligned_cols=72 Identities=21% Similarity=0.218 Sum_probs=40.5
Q ss_pred HHHHhHhhcChHHHHHHHHHHHHhcC----cceEEeeCCcchhhhHhHHHHHHHHHH-HHhhccccCCchHHHHHHHHHH
Q 047942 20 LRSAIELSTSGYEVKLLKQRLHYLSN----TAAVFKVGPCKLPDKLNGARLTLEAVK-RTMDQKIGPGAGIALLHVSKEL 94 (132)
Q Consensus 20 l~~~i~~~~~~~~~~~L~eRlarL~g----gvavI~VGg~Ei~erk~ri~dAlna~~-aAl~~GiVpGGG~all~a~~~L 94 (132)
+.+-|++.. .-||.+.- |.+++| ...|||+||.-++++...+-.-+...+ ..++-=+|.|||...=.....+
T Consensus 32 ~~~~l~~~~--~~re~~py-i~~f~~~~~~~~iViK~GGsv~~~~l~~~a~dI~~l~~~G~~~VvVHGgG~~i~~~l~~~ 108 (460)
T 3s6g_A 32 IVQLLSHMR--DGKEIREY-LHRFSGIDQERFAVIKVGGAVIQDDLPGLASALAFLQTVGLTPVVVHGGGPQLDAALEAA 108 (460)
T ss_dssp HHHHHHTST--THHHHHHH-HHHTSSSCGGGSEEEEECHHHHHHCHHHHHHHHHHHHHHTCCCEEEECCHHHHHHHHHHH
T ss_pred HHHHHHhcC--CHHHHHHH-HHHHhCCCCCCEEEEEEChHHhhhHHHHHHHHHHHHHHCCCcEEEEECCChHHHHHHHHc
Confidence 333444443 44555555 889998 899999999944444333322222222 2222237899987665544333
No 47
>3zzh_A Acetylglutamate kinase; transferase, arginine biosynthesis; HET: ARG NLG; 2.10A {Saccharomyces cerevisiae} PDB: 3zzg_A 3zzf_A*
Probab=46.51 E-value=40 Score=26.76 Aligned_cols=57 Identities=21% Similarity=0.239 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhcC----cceEEeeCCcchhhhHhHHHHHHHHHHH-HhhccccCCchHHHHHH
Q 047942 33 VKLLKQRLHYLSN----TAAVFKVGPCKLPDKLNGARLTLEAVKR-TMDQKIGPGAGIALLHV 90 (132)
Q Consensus 33 ~~~L~eRlarL~g----gvavI~VGg~Ei~erk~ri~dAlna~~a-Al~~GiVpGGG~all~a 90 (132)
||.+.- +.+|.+ .+.|||+||.-+.++...+-.-+...+. .++-=+|.|||...=+.
T Consensus 33 re~~~y-i~~f~~~~~~~~iViK~GGsv~~~~~~~~~~dI~~l~~~G~~~VvVHGgG~~i~~~ 94 (307)
T 3zzh_A 33 REVEQY-LKYFTSVSQQQFAVIKVGGAIISDNLHELASCLAFLYHVGLYPIVLHGTGPQVNGR 94 (307)
T ss_dssp HHHHHH-HHHHHCCCCSCCEEEEECHHHHHHSHHHHHHHHHHHHHBTCCEEEEECCHHHHHHH
T ss_pred hhHHHH-HHHHhCCCCCCEEEEEEChHHhhchHHHHHHHHHHHHHCCCCEEEEECCCHHHHHH
Confidence 555554 788998 8899999999444433333222222221 11112789998655443
No 48
>1z9d_A Uridylate kinase, UK, UMP kinase; structural genomics, protein structure initiative, NYSGXRC, PYRH, putative uridylate kinase, PSI; 2.80A {Streptococcus pyogenes} SCOP: c.73.1.3
Probab=46.34 E-value=15 Score=27.69 Aligned_cols=41 Identities=10% Similarity=0.099 Sum_probs=27.4
Q ss_pred cceEEeeCCcchhh------hHhHHHHHHHHHHHHhhcc----ccCCchHH
Q 047942 46 TAAVFKVGPCKLPD------KLNGARLTLEAVKRTMDQK----IGPGAGIA 86 (132)
Q Consensus 46 gvavI~VGg~Ei~e------rk~ri~dAlna~~aAl~~G----iVpGGG~a 86 (132)
...||++||.-+.. ...+++...+.+..-.+.| +|.|||..
T Consensus 8 k~iViKlGGs~l~~~~~~~~~~~~~~~~a~~I~~l~~~G~~vVlVhGgG~~ 58 (252)
T 1z9d_A 8 QRILIKLSGEALAGEKGVGIDIPTVQAIAKEIAEVHVSGVQIALVIGGGNL 58 (252)
T ss_dssp SEEEEEECGGGGTCSSSSSCCHHHHHHHHHHHHHHHTTTCEEEEEECCTTT
T ss_pred CEEEEEEchHHccCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEECCChH
Confidence 45799999993332 3456666666666555666 79988763
No 49
>1ybx_A Conserved hypothetical protein; ST genomics, PSI, protein structure initiative, southeast COLL for structural genomics, secsg; HET: MSE; 1.80A {Clostridium thermocellum}
Probab=43.36 E-value=83 Score=22.51 Aligned_cols=39 Identities=8% Similarity=0.157 Sum_probs=26.6
Q ss_pred CCHHHHHHHHHHHHHHhHhhcChHHHHHHHHHHHHhc------CcceEEeeCCc
Q 047942 8 GSQSAIEERHSQLRSAIELSTSGYEVKLLKQRLHYLS------NTAAVFKVGPC 55 (132)
Q Consensus 8 g~~~~i~~r~~~l~~~i~~~~~~~~~~~L~eRlarL~------ggvavI~VGg~ 55 (132)
||-..+-+..+++++++ ++++++|+... ||...|.+-|.
T Consensus 41 gnm~~mmkQAQkmQ~km---------~k~QeeL~~~eveg~sGgGlVkVtvnG~ 85 (143)
T 1ybx_A 41 GNINNLVKQAQKMQRDM---------ERVQEELKEKTVEASAGGGAVTVVATGR 85 (143)
T ss_dssp --CHHHHHHHHHHHHHH---------HHHHHHHHHCEEEEEETTTTEEEEEETT
T ss_pred hhHHHHHHHHHHHHHHH---------HHHHHHHhcCEEEEEECCCEEEEEEecC
Confidence 46677777888888777 56677777763 55677777776
No 50
>2ij9_A Uridylate kinase; structural genomics, protein structure initiative, P nysgxrc; 2.90A {Archaeoglobus fulgidus} SCOP: c.73.1.3
Probab=43.27 E-value=39 Score=24.64 Aligned_cols=42 Identities=14% Similarity=0.166 Sum_probs=22.7
Q ss_pred eEEeeCCcchhhhHhHHHHHHHHHHHHhh---ccccCCchHHHHH
Q 047942 48 AVFKVGPCKLPDKLNGARLTLEAVKRTMD---QKIGPGAGIALLH 89 (132)
Q Consensus 48 avI~VGg~Ei~erk~ri~dAlna~~aAl~---~GiVpGGG~all~ 89 (132)
.|||+||.-+..+..+++...+.+....+ ==+|.|||..--.
T Consensus 3 iViK~GGs~l~~~~~~~~~~~~~i~~l~~g~~vvlV~ggG~~~~~ 47 (219)
T 2ij9_A 3 VVLSLGGSVLSNESEKIREFAKTIESVAQQNQVFVVVGGGKLARE 47 (219)
T ss_dssp EEEEECSSTTTTCHHHHHHHHHHHHHHHHHSEEEEEECCHHHHHH
T ss_pred EEEEeChhhhCChHHHHHHHHHHHHHHcCCCEEEEEECcchHhcc
Confidence 58999999332213334444444433323 1279998765433
No 51
>2a1f_A Uridylate kinase; PYRH, structural genomics, PSI, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.10A {Haemophilus influenzae} SCOP: c.73.1.3 PDB: 2bne_A* 2bnf_A* 2v4y_A* 2bnd_A*
Probab=42.43 E-value=18 Score=27.15 Aligned_cols=41 Identities=12% Similarity=0.064 Sum_probs=27.4
Q ss_pred cceEEeeCCcchhh------hHhHHHHHHHHHHHHhhcc----ccCCchHH
Q 047942 46 TAAVFKVGPCKLPD------KLNGARLTLEAVKRTMDQK----IGPGAGIA 86 (132)
Q Consensus 46 gvavI~VGg~Ei~e------rk~ri~dAlna~~aAl~~G----iVpGGG~a 86 (132)
...|||+||.-+.. ...+++...+.+....+.| +|.|||..
T Consensus 9 k~iViKlGGs~l~~~~~~~~~~~~i~~~a~~I~~l~~~G~~vVlVhGgG~~ 59 (247)
T 2a1f_A 9 KRILLKLSGEALQGEDGLGIDPAILDRMAVEIKELVEMGVEVSVVLGGGNL 59 (247)
T ss_dssp SEEEEEECGGGGCCTTSSSCCHHHHHHHHHHHHHHHTTTCEEEEEECCTTT
T ss_pred cEEEEEEChhhhCCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCChH
Confidence 45799999993332 3456666666666555556 79999775
No 52
>3s6k_A Acetylglutamate kinase; synthase, transferase; 2.80A {Xanthomonas campestris PV}
Probab=39.46 E-value=80 Score=26.57 Aligned_cols=57 Identities=26% Similarity=0.267 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHhcC----cceEEeeCCcchhhhHhHHHHHHHHHH-HHhhccccCCchHHHHH
Q 047942 32 EVKLLKQRLHYLSN----TAAVFKVGPCKLPDKLNGARLTLEAVK-RTMDQKIGPGAGIALLH 89 (132)
Q Consensus 32 ~~~~L~eRlarL~g----gvavI~VGg~Ei~erk~ri~dAlna~~-aAl~~GiVpGGG~all~ 89 (132)
-||.+.- |.+++| ...|||+||.-+.++...+-.-+...+ ..++-=+|.|||...=.
T Consensus 45 ~re~~py-i~~f~~~~~~~~iViK~GG~v~~~~l~~va~dI~~l~~~G~~~VvVHGgg~~i~~ 106 (467)
T 3s6k_A 45 AKEISQY-LKRFSQLDAKRFAVVKVGGAVLRDDLEALTSSLSFLQEVGLTPIVLHGAGPQLDA 106 (467)
T ss_dssp HHHHHHH-HHSSSSSCSTTSCCCCCCHHHHTTCCHHHHHHHHHHHTTSCCCCCCCCCCHHHHH
T ss_pred HHHHHHH-HHHHhCCCCCcEEEEEEChHHhhhHHHHHHHHHHHHHHCCCcEEEEECCChHHHH
Confidence 3455544 889998 899999999933443222222222221 12222388999885544
No 53
>2a26_A Calcyclin-binding protein; helical hairpin, dimerization, apoptosis; HET: CXS; 1.20A {Homo sapiens} SCOP: a.2.16.1
Probab=38.66 E-value=61 Score=19.15 Aligned_cols=39 Identities=8% Similarity=0.104 Sum_probs=34.6
Q ss_pred CHHHHHHHHHHHHHHhHhhcChHHHHHHHHHHHHhcCcc
Q 047942 9 SQSAIEERHSQLRSAIELSTSGYEVKLLKQRLHYLSNTA 47 (132)
Q Consensus 9 ~~~~i~~r~~~l~~~i~~~~~~~~~~~L~eRlarL~ggv 47 (132)
..+++..-+++++..++.++.+.=++.|..++.++...+
T Consensus 5 ~~eeL~~DL~El~~Ll~~AkR~rVk~~L~~ei~~lE~ei 43 (50)
T 2a26_A 5 ASEELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEI 43 (50)
T ss_dssp CHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 458899999999999999999999999999998887554
No 54
>2j5v_A Glutamate 5-kinase; proline biosynthesis, gamma glutamyl kinase, amino-acid biosynthesis, transferase, feedback regulation, PUA domain; HET: RGP; 2.5A {Escherichia coli} PDB: 2j5t_A* 2w21_A
Probab=38.30 E-value=1.2e+02 Score=24.37 Aligned_cols=42 Identities=17% Similarity=0.059 Sum_probs=26.1
Q ss_pred ceEEeeCCcchhhh-----HhHHHHHHHHHHHHhhcc----ccCCchHHHH
Q 047942 47 AAVFKVGPCKLPDK-----LNGARLTLEAVKRTMDQK----IGPGAGIALL 88 (132)
Q Consensus 47 vavI~VGg~Ei~er-----k~ri~dAlna~~aAl~~G----iVpGGG~all 88 (132)
..|||+||.-+... ..+++...+.+....+.| +|.|||.+.-
T Consensus 6 ~iVIKiGGs~l~~~~~~~~~~~l~~la~~Ia~l~~~G~~vVlV~gGgi~~g 56 (367)
T 2j5v_A 6 TLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAAG 56 (367)
T ss_dssp EEEEEECHHHHTTTSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHH
T ss_pred EEEEEECcHHhcCCCCCcCHHHHHHHHHHHHHHHhCCCcEEEEEcCHHHHH
Confidence 57999999933221 345555555555555556 6889986643
No 55
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=38.01 E-value=19 Score=19.71 Aligned_cols=20 Identities=20% Similarity=0.144 Sum_probs=14.3
Q ss_pred cCcceEEeeCCc--chhhhHhH
Q 047942 44 SNTAAVFKVGPC--KLPDKLNG 63 (132)
Q Consensus 44 ~ggvavI~VGg~--Ei~erk~r 63 (132)
||-|-+|-|||+ |++..|.-
T Consensus 2 sgqvrtiwvggtpeelkklkee 23 (36)
T 2ki0_A 2 SGQVRTIWVGGTPEELKKLKEE 23 (36)
T ss_dssp CCSCCCCCBCCCHHHHHHHHHH
T ss_pred CceeEEEEecCCHHHHHHHHHH
Confidence 567888999998 66655543
No 56
>2f6m_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomes, trafficking complex, vacuole protei sorting, ESCRT protein complexes; HET: DDQ; 2.10A {Saccharomyces cerevisiae} SCOP: a.2.17.1 PDB: 2f66_A*
Probab=37.44 E-value=32 Score=21.61 Aligned_cols=26 Identities=23% Similarity=0.224 Sum_probs=21.9
Q ss_pred chhhhHhHHHHHHHHHHHHhhccccC
Q 047942 56 KLPDKLNGARLTLEAVKRTMDQKIGP 81 (132)
Q Consensus 56 Ei~erk~ri~dAlna~~aAl~~GiVp 81 (132)
+.--....|+|++-+.-.|++.|.|+
T Consensus 10 ~l~Aed~AieDaiy~L~~aL~~g~I~ 35 (65)
T 2f6m_A 10 NLVAQDYALTDTIEALSRMLHRGTIP 35 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 34445678999999999999999887
No 57
>2j4j_A Uridylate kinase; transferase, nucleoside monophosphate kinase, UMP kinase, aspartokinase fold, pyrimidine nucleotide synthesis; HET: U5P ACP 4TC; 2.1A {Sulfolobus solfataricus} PDB: 2j4k_A* 2j4l_A*
Probab=37.41 E-value=1.2e+02 Score=22.10 Aligned_cols=42 Identities=14% Similarity=0.236 Sum_probs=24.4
Q ss_pred eEEeeCCcchhh-hHhHHHHHHHHHHHHhhcc----ccCCchHHHHH
Q 047942 48 AVFKVGPCKLPD-KLNGARLTLEAVKRTMDQK----IGPGAGIALLH 89 (132)
Q Consensus 48 avI~VGg~Ei~e-rk~ri~dAlna~~aAl~~G----iVpGGG~all~ 89 (132)
.|||+||.-+.. ...+++...+.+....+.| +|.|||...-.
T Consensus 3 iViK~GGs~l~~~~~~~~~~~~~~i~~l~~~g~~vvlV~ggG~~~~~ 49 (226)
T 2j4j_A 3 IILKISGKFFDEDNVDNLIVLRQSIKELADNGFRVGIVTGGGSTARR 49 (226)
T ss_dssp EEEEECTHHHHTCCHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHHH
T ss_pred EEEEeccccccCCCHHHHHHHHHHHHHHHhCCCeEEEEECcchHhch
Confidence 589999993331 2234444444444433434 79998875444
No 58
>4a9a_A Ribosome-interacting GTPase 1; DRG-DFRP complex, ribosome binding GTPase; 2.67A {Saccharomyces cerevisiae}
Probab=36.92 E-value=43 Score=27.24 Aligned_cols=33 Identities=18% Similarity=0.316 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHhHhhc----ChHHHHHHHHHHHHh
Q 047942 11 SAIEERHSQLRSAIELST----SGYEVKLLKQRLHYL 43 (132)
Q Consensus 11 ~~i~~r~~~l~~~i~~~~----~~~~~~~L~eRlarL 43 (132)
.-++++|+.|++++..++ +++-.-.|+.|||+|
T Consensus 9 ~t~~eki~~ie~~~~~~~k~k~Te~~~~~lk~kla~l 45 (376)
T 4a9a_A 9 STTVEKIKAIEDEMARTQKNKATSFHLGQLKAKLAKL 45 (376)
T ss_dssp CHHHHHHHHHHHHHHHSCCSTTTHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHH
Confidence 357889999999998754 466777889999987
No 59
>4a7w_A Uridylate kinase; transferase; HET: GTP; 1.80A {Helicobacter pylori} PDB: 4a7x_A*
Probab=36.77 E-value=36 Score=25.64 Aligned_cols=43 Identities=19% Similarity=0.246 Sum_probs=26.9
Q ss_pred CcceEEeeCCcchh-h-----hHhHHHHHHHHHHHHhhcc----ccCCchHHH
Q 047942 45 NTAAVFKVGPCKLP-D-----KLNGARLTLEAVKRTMDQK----IGPGAGIAL 87 (132)
Q Consensus 45 ggvavI~VGg~Ei~-e-----rk~ri~dAlna~~aAl~~G----iVpGGG~al 87 (132)
-..-|||+||.-+. + ...+++.....+....+.| +|-|||...
T Consensus 7 ~k~iViKiGGs~l~~~~~~~~~~~~i~~~a~~I~~l~~~G~~vvlV~gGG~~~ 59 (240)
T 4a7w_A 7 NKRVLVKFSGEALAGDNQFGIDIHVLDHIAKEIKSLVENDIEVGIVIGGGNII 59 (240)
T ss_dssp CCEEEEEECGGGGGTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECCTTTC
T ss_pred CCEEEEEECHHHcCCCCCCCCCHHHHHHHHHHHHHHHHCCCcEEEEECCcHHH
Confidence 34679999999332 1 2445555555555555555 688887754
No 60
>3ek6_A Uridylate kinase; UMPK unique GTP B site, allosteric regulation, ATP-binding, nucleotid binding, pyrimidine biosynthesis, transferase; 2.34A {Xanthomonas campestris PV} SCOP: c.73.1.0 PDB: 3ek5_A
Probab=36.13 E-value=32 Score=25.99 Aligned_cols=40 Identities=13% Similarity=0.056 Sum_probs=24.6
Q ss_pred cceEEeeCCc-chhh-----hHhHHHHHHHHHHHHhhcc----ccCCchH
Q 047942 46 TAAVFKVGPC-KLPD-----KLNGARLTLEAVKRTMDQK----IGPGAGI 85 (132)
Q Consensus 46 gvavI~VGg~-Ei~e-----rk~ri~dAlna~~aAl~~G----iVpGGG~ 85 (132)
..-|||+||. -.++ ...+++.....+....+.| +|-|||.
T Consensus 10 ~riViKlGGs~l~~~~~~~~~~~~i~~la~~i~~l~~~G~~vviV~gGG~ 59 (243)
T 3ek6_A 10 RRILLKLSGEALMGDGDYGIDPKVINRLAHEVIEAQQAGAQVALVIGGGN 59 (243)
T ss_dssp SEEEEEECGGGGTTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECSTT
T ss_pred cEEEEEEchhhccCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCCH
Confidence 3469999999 2222 1345555555555555544 6888886
No 61
>3d40_A FOMA protein; fosfomycin, antibiotic resistance, kinase, phosphoryl transfer, transferase; 1.53A {Streptomyces wedmorensis} PDB: 3d41_A* 3qun_A* 3quo_A* 3qur_A* 3qvf_A* 3qvh_A*
Probab=36.12 E-value=78 Score=24.37 Aligned_cols=49 Identities=12% Similarity=0.062 Sum_probs=27.0
Q ss_pred HhcCcceEEeeCCcchhh-------hHhHHHHHHHHHHHHhhcc-----ccCCchHHHHHH
Q 047942 42 YLSNTAAVFKVGPCKLPD-------KLNGARLTLEAVKRTMDQK-----IGPGAGIALLHV 90 (132)
Q Consensus 42 rL~ggvavI~VGg~Ei~e-------rk~ri~dAlna~~aAl~~G-----iVpGGG~all~a 90 (132)
+..+...|||+||.-+.. ...+++...+.+....+.| +|.|||..--..
T Consensus 20 ~~~~~~iVIKlGGs~l~~~~~~~~~~~~~l~~la~~Ia~l~~~G~~~vViVhGgG~~~~~~ 80 (286)
T 3d40_A 20 HMTPDFLAIKVGGSLFSRKDEPGSLDDDAVTRFARNFARLAETYRGRMVLISGGGAFGHGA 80 (286)
T ss_dssp TSCCSEEEEEECGGGTBCTTSTTCBCHHHHHHHHHHHHHHHHHTTTSEEEEECCCCC----
T ss_pred ccCCCEEEEEeCchHhCCCcccccchHHHHHHHHHHHHHHHHcCCCeEEEEECCHHHHHHH
Confidence 334557899999992222 1335555555555444434 688888765443
No 62
>2ay0_A Bifunctional PUTA protein; ribbon-helix-helix, DNA-binding domain, proline catabo proline utilization A, DNA binding protein; 2.10A {Escherichia coli} SCOP: a.43.1.11
Probab=36.08 E-value=29 Score=20.75 Aligned_cols=36 Identities=19% Similarity=0.145 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHhHhhcChHHHHHHHHHHHHhcC
Q 047942 10 QSAIEERHSQLRSAIELSTSGYEVKLLKQRLHYLSN 45 (132)
Q Consensus 10 ~~~i~~r~~~l~~~i~~~~~~~~~~~L~eRlarL~g 45 (132)
++.+.+|++++.+....+.|.+=++.+.+-|.++.-
T Consensus 11 ~~el~~rL~~lA~~~~rs~s~lireAi~~yl~~~E~ 46 (58)
T 2ay0_A 11 DDATRERIKSAATRIDRTPHWLIKQAIFSYLEQLEN 46 (58)
T ss_dssp CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCC-
T ss_pred CHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHh
Confidence 578899999999999999999999999888776543
No 63
>1yfs_A Alanyl-tRNA synthetase; alpha-beta fold, helix-loop-helix motif, amino acid binding, ligase; 2.08A {Aquifex aeolicus} SCOP: a.203.1.1 d.104.1.1 PDB: 1yfr_A* 1riq_A 1yft_A 1ygb_A 3htz_A
Probab=35.67 E-value=1.2e+02 Score=25.84 Aligned_cols=58 Identities=19% Similarity=0.120 Sum_probs=42.9
Q ss_pred HHhHhhcChHHH---HHHHHHHHHhcCcceEEeeCCc-chhhhHhHHHHHHHHHHHHhhccccCCc
Q 047942 22 SAIELSTSGYEV---KLLKQRLHYLSNTAAVFKVGPC-KLPDKLNGARLTLEAVKRTMDQKIGPGA 83 (132)
Q Consensus 22 ~~i~~~~~~~~~---~~L~eRlarL~ggvavI~VGg~-Ei~erk~ri~dAlna~~aAl~~GiVpGG 83 (132)
.-+....|.||- .-|-+.+++++|.- -|.. +.+..-.-|-|-++++.-++.+|++|+.
T Consensus 228 ~vlQg~~snYdtDlf~pii~~i~~~~g~~----Y~~~~~~d~s~rvIADH~R~~~f~I~DGv~PsN 289 (465)
T 1yfs_A 228 SVLQGKNSNFEIDIIFPLIQFGEEVSGKK----YGEKFETDVALRVIADHLRAITFAISDGVIPSN 289 (465)
T ss_dssp HHHTTCSSGGGSTTTHHHHHHHHHHHCCC----TTSCHHHHHHHHHHHHHHHHHHHHHHTTCCCCS
T ss_pred HHHcCCCccchhhhHHHHHHHHHHHhCCC----CCCCcccceeEEEEcchhhhhhhhhccccccCC
Confidence 335567788885 44566788888742 3434 5566777789999999999999999976
No 64
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=35.65 E-value=25 Score=18.10 Aligned_cols=10 Identities=40% Similarity=0.521 Sum_probs=6.6
Q ss_pred HHHHHHHHHh
Q 047942 34 KLLKQRLHYL 43 (132)
Q Consensus 34 ~~L~eRlarL 43 (132)
|.|+|||.+|
T Consensus 11 edlqerlrkl 20 (27)
T 3twe_A 11 EDLQERLRKL 20 (27)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5677777665
No 65
>2brx_A Uridylate kinase; UMP kinase, amino acid kinase, phosphoryl group transfer, pyrimidine biosynthesis, transferase; 2.40A {Pyrococcus furiosus} SCOP: c.73.1.3 PDB: 2ji5_A* 2bmu_A* 2bri_A*
Probab=34.00 E-value=38 Score=25.39 Aligned_cols=42 Identities=14% Similarity=0.194 Sum_probs=24.8
Q ss_pred ceEEeeCCcchhh---hHhHHHHHHHHHHHHhhcc----ccCCchHHHHH
Q 047942 47 AAVFKVGPCKLPD---KLNGARLTLEAVKRTMDQK----IGPGAGIALLH 89 (132)
Q Consensus 47 vavI~VGg~Ei~e---rk~ri~dAlna~~aAl~~G----iVpGGG~all~ 89 (132)
..||++||.-+.. ...+++...+.+....+ | +|.|||...-.
T Consensus 21 ~iViKlGGs~l~~~~~~~~~i~~~~~~i~~l~~-g~~vViV~GgG~~~~~ 69 (244)
T 2brx_A 21 RIVFDIGGSVLVPENPDIDFIKEIAYQLTKVSE-DHEVAVVVGGGKLARK 69 (244)
T ss_dssp EEEEEECHHHHCSSSCCHHHHHHHHHHHHHHHH-HSEEEEEECCHHHHHH
T ss_pred EEEEEechhhcCCCCCCHHHHHHHHHHHHHHhC-CCeEEEEECccHHHhc
Confidence 5799999993321 23344444444444333 4 78999865444
No 66
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=33.65 E-value=33 Score=23.30 Aligned_cols=18 Identities=17% Similarity=0.180 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHhcCcce
Q 047942 31 YEVKLLKQRLHYLSNTAA 48 (132)
Q Consensus 31 ~~~~~L~eRlarL~ggva 48 (132)
-+-++|++|+.+|..|-+
T Consensus 82 ~E~erLr~~v~~lEeg~~ 99 (100)
T 1go4_E 82 AECERLRGLLRAMERGGT 99 (100)
T ss_dssp HHHHHHHHHHTTCC----
T ss_pred HHHHHHHHHHHHHhccCC
Confidence 455899999999988643
No 67
>3l86_A Acetylglutamate kinase; ARGB, amino-acid biosynthesis, arginine biosynthesi binding, nucleotide-binding, transferase; HET: ADP NLG; 2.06A {Streptococcus mutans}
Probab=31.65 E-value=1.1e+02 Score=23.63 Aligned_cols=52 Identities=21% Similarity=0.204 Sum_probs=26.9
Q ss_pred HHHHhcCcceEEeeCCcchhhhHhHHHHHHHHHHHHhhcc----ccCCchHHHHHHHHHH
Q 047942 39 RLHYLSNTAAVFKVGPCKLPDKLNGARLTLEAVKRTMDQK----IGPGAGIALLHVSKEL 94 (132)
Q Consensus 39 RlarL~ggvavI~VGg~Ei~erk~ri~dAlna~~aAl~~G----iVpGGG~all~a~~~L 94 (132)
|-..+. ..-|||+||.-+.+....+ ++.+..-...| +|.|||.+.-.....+
T Consensus 31 ~~~~m~-k~iVIKiGGs~l~~~~~~l---~~dIa~L~~~G~~vVlVhgGg~~i~~~l~~l 86 (279)
T 3l86_A 31 GRGSMK-DIIVIKIGGVASQQLSGDF---LSQIKNWQDAGKQLVIVHGGGFAINKLMEEN 86 (279)
T ss_dssp ----CC-CEEEEEECTTGGGSCCHHH---HHHHHHHHHTTCEEEEEECCHHHHHHHHHHT
T ss_pred ccccCC-ceEEEEEChHHHHhHHHHH---HHHHHHHHhCCCcEEEEECCHHHHHHHHHHc
Confidence 334444 5789999999444332223 22222222334 7889987665544444
No 68
>2va1_A Uridylate kinase; UMPK, transferase, pyrimidine biosynthesis, amino acid kinase family; 2.50A {Ureaplasma parvum}
Probab=31.57 E-value=32 Score=26.01 Aligned_cols=40 Identities=20% Similarity=0.196 Sum_probs=25.8
Q ss_pred cceEEeeCCcchhh------hHhHHHHHHHHHHHHhhcc----ccCCchHH
Q 047942 46 TAAVFKVGPCKLPD------KLNGARLTLEAVKRTMDQK----IGPGAGIA 86 (132)
Q Consensus 46 gvavI~VGg~Ei~e------rk~ri~dAlna~~aAl~~G----iVpGGG~a 86 (132)
...||++||.-+.. ...+++...+.+.... .| +|.|||..
T Consensus 25 k~iVIKiGGs~l~~~~~~~~~~~~i~~~a~~i~~l~-~g~~vVlVhGgG~~ 74 (256)
T 2va1_A 25 QRIVIKISGACLKQNDSSIIDFIKINDLAEQIEKIS-KKYIVSIVLGGGNI 74 (256)
T ss_dssp SEEEEEECGGGGCSSTTCSSCHHHHHHHHHHHHHHT-TTSEEEEEECCTTT
T ss_pred CEEEEEechhhccCCCCCCCCHHHHHHHHHHHHHHh-CCCEEEEEECCcHH
Confidence 45899999993322 2445666666555444 55 79998865
No 69
>3nwy_A Uridylate kinase; allosterically activated form, AAK fold, UMP kinase, transfe; HET: GTP UDP; 2.54A {Mycobacterium tuberculosis}
Probab=31.41 E-value=39 Score=26.45 Aligned_cols=43 Identities=9% Similarity=0.102 Sum_probs=26.9
Q ss_pred CcceEEeeCCcchhh-----hHhHHHHHHHHHHHHhhcc----ccCCchHHH
Q 047942 45 NTAAVFKVGPCKLPD-----KLNGARLTLEAVKRTMDQK----IGPGAGIAL 87 (132)
Q Consensus 45 ggvavI~VGg~Ei~e-----rk~ri~dAlna~~aAl~~G----iVpGGG~al 87 (132)
-...|||+||.-+.. ...+++...+.+....++| +|-|||...
T Consensus 50 ~krIViKlGGs~L~~~~~~ld~~~i~~la~~I~~l~~~G~~vviV~GgG~i~ 101 (281)
T 3nwy_A 50 YSRVLLKLGGEMFGGGQVGLDPDVVAQVARQIADVVRGGVQIAVVIGGGNFF 101 (281)
T ss_dssp CSEEEEEECGGGGGTTSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECCTTC-
T ss_pred CcEEEEEEchhhccCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECChhHh
Confidence 345799999993322 2445666666666666655 788887643
No 70
>4igg_A Catenin alpha-1; asymmetric dimer, adherens junctions, F-actin binding, cell; 3.66A {Homo sapiens}
Probab=30.15 E-value=1.3e+02 Score=27.29 Aligned_cols=66 Identities=15% Similarity=0.246 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHhHhhcChHH----HHHHHHHHHHhcCcceEEeeCCcchhhhHhHHHHHHHHHHHHhhc
Q 047942 12 AIEERHSQLRSAIELSTSGYE----VKLLKQRLHYLSNTAAVFKVGPCKLPDKLNGARLTLEAVKRTMDQ 77 (132)
Q Consensus 12 ~i~~r~~~l~~~i~~~~~~~~----~~~L~eRlarL~ggvavI~VGg~Ei~erk~ri~dAlna~~aAl~~ 77 (132)
.+...+.++...|...+..|. |+.|+++|-++-.+++.+---.+.-.++|.+|-.-++.++.++.+
T Consensus 196 ~l~~al~~~~~~i~~~p~~~~e~~~r~~L~~~Le~iv~~a~~~aDs~~t~~~~Re~Iv~~C~~vrq~L~d 265 (832)
T 4igg_A 196 ELAYALNNFDKQIIVDPLSFSEERFRPSLEERLESIISGAALMADSSCTRDDRRERIVAECNAVRQALQD 265 (832)
T ss_dssp HHHHHHHHHHHHHHSCCCSSCCSSHHHHHHHHHHHHHHHHHHHHSSTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCccccccchhhHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHH
Confidence 567788888888865443333 788999998888775544333336678899999899999887765
No 71
>1ysm_A Calcyclin-binding protein; helix-turn-helix, metal binding protein; NMR {Mus musculus} SCOP: a.2.16.1
Probab=29.56 E-value=98 Score=19.81 Aligned_cols=40 Identities=10% Similarity=0.057 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHhHhhcChHHHHHHHHHHHHhcCcceE
Q 047942 10 QSAIEERHSQLRSAIELSTSGYEVKLLKQRLHYLSNTAAV 49 (132)
Q Consensus 10 ~~~i~~r~~~l~~~i~~~~~~~~~~~L~eRlarL~ggvav 49 (132)
.+++..-+++++..++.++.+.=++.|..++.+|...++.
T Consensus 5 ~eeL~~DLeEl~~Ll~~AkR~rVk~~L~~ei~~lE~ei~~ 44 (77)
T 1ysm_A 5 LEELQKDLEEVKVLLEKSTRKRLRDTLTSEKSKIETELKN 44 (77)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHH
Confidence 4678899999999999999999999999999888866553
No 72
>2p22_A Suppressor protein STP22 of temperature- sensitive alpha-factor receptor and arginine...; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_A
Probab=29.49 E-value=1.7e+02 Score=21.53 Aligned_cols=26 Identities=19% Similarity=0.199 Sum_probs=22.3
Q ss_pred chhhhHhHHHHHHHHHHHHhhccccC
Q 047942 56 KLPDKLNGARLTLEAVKRTMDQKIGP 81 (132)
Q Consensus 56 Ei~erk~ri~dAlna~~aAl~~GiVp 81 (132)
++--....|+|++...-.|+..|.|+
T Consensus 119 ~l~Aed~AieDaIy~L~~al~~g~I~ 144 (174)
T 2p22_A 119 NLVAQDYALTDTIECLSRMLHRGTIP 144 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 55556788999999999999999876
No 73
>2gpe_A Bifunctional protein PUTA; ribbon-helix-helix, DNA-binding domain, proline catabo proline utilization A, DNA binding protein; 1.90A {Escherichia coli} PDB: 2rbf_A* 2jxg_A 2jxh_A 2jxi_A*
Probab=28.01 E-value=54 Score=18.47 Aligned_cols=35 Identities=17% Similarity=0.114 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHhHhhcChHHHHHHHHHHHHhc
Q 047942 10 QSAIEERHSQLRSAIELSTSGYEVKLLKQRLHYLS 44 (132)
Q Consensus 10 ~~~i~~r~~~l~~~i~~~~~~~~~~~L~eRlarL~ 44 (132)
++.+.++++.+.+....+.|.+=++.+++-|.+..
T Consensus 11 ~~~l~~~l~~lA~~~~rs~s~lir~Ai~~yl~~~e 45 (52)
T 2gpe_A 11 DDATRERIKSAATRIDRTPHWLIKQAIFSYLEQLE 45 (52)
T ss_dssp EHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHH
Confidence 46788999999999999999999988888776543
No 74
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=27.89 E-value=85 Score=19.69 Aligned_cols=15 Identities=27% Similarity=0.350 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHhcC
Q 047942 31 YEVKLLKQRLHYLSN 45 (132)
Q Consensus 31 ~~~~~L~eRlarL~g 45 (132)
.+.+.|+.+|..|+|
T Consensus 68 ~~~~~L~~~l~~L~~ 82 (83)
T 1nkp_B 68 RQNALLEQQVRALGG 82 (83)
T ss_dssp HHHHHHHHHHHTCSC
T ss_pred HHHHHHHHHHHHhcC
Confidence 344566666666665
No 75
>4ab7_A Protein Arg5,6, mitochondrial; transferase, arginine biosynthesis, amino acid kinase domain GCN5-related acetyltransferase, GNAT; HET: NLG; 3.25A {Saccharomyces cerevisiae} PDB: 3zzi_A*
Probab=27.70 E-value=1.5e+02 Score=24.93 Aligned_cols=56 Identities=21% Similarity=0.255 Sum_probs=24.6
Q ss_pred HHHHHHHHHHhcC----cceEEeeCCcchhhhHhHHHHHHHHHHH-HhhccccCCchHHHHH
Q 047942 33 VKLLKQRLHYLSN----TAAVFKVGPCKLPDKLNGARLTLEAVKR-TMDQKIGPGAGIALLH 89 (132)
Q Consensus 33 ~~~L~eRlarL~g----gvavI~VGg~Ei~erk~ri~dAlna~~a-Al~~GiVpGGG~all~ 89 (132)
||.+.- |.+|.| .+.||++||.-+.+....+-.-+...+. .++-=+|.|||...=.
T Consensus 33 re~~~y-l~~F~~~~~~~~iVIK~GGsv~~~~l~~la~dI~~l~~~G~~~VvVHGgG~~i~~ 93 (464)
T 4ab7_A 33 REVEQY-LKYFTSVSQQQFAVIKVGGAIISDNLHELASCLAFLYHVGLYPIVLHGTGPQVNG 93 (464)
T ss_dssp -----------------CCEEEEECHHHHHHCHHHHHHHHHHHHHTTCCCEEEECCCHHHHH
T ss_pred hhHHHH-HHHHhCCCCCceEEEEECHHHhhchHHHHHHHHHHHHHCCCeEEEEECCcHHHHH
Confidence 444443 778888 8899999999444443333323322221 2222388999865444
No 76
>2we5_A Carbamate kinase 1; arginine catabolism, arginine metabolism, ATP synthesys, open alpha/beta sheet, phosphotransferase, transferase; HET: ADP; 1.39A {Enterococcus faecalis} PDB: 1b7b_A 2we4_A*
Probab=27.43 E-value=1.6e+02 Score=22.80 Aligned_cols=49 Identities=12% Similarity=0.107 Sum_probs=30.8
Q ss_pred cceEEeeCCcch-------hhhHhHHHHHHHHHHHHhhcc----ccCCchHHHHHHHHHH
Q 047942 46 TAAVFKVGPCKL-------PDKLNGARLTLEAVKRTMDQK----IGPGAGIALLHVSKEL 94 (132)
Q Consensus 46 gvavI~VGg~Ei-------~erk~ri~dAlna~~aAl~~G----iVpGGG~all~a~~~L 94 (132)
...||++||.-+ ++...+++...+.+..-.+.| +|-|||...=.....+
T Consensus 3 k~iVIKlGGs~l~~~~~~~~~~~~~~~~~a~~I~~l~~~G~~vVlVhGgg~~~~~~l~~~ 62 (310)
T 2we5_A 3 KKMVVALGGNAILSNDASAHAQQQALVQTSAYLVHLIKQGHRLIVSHGNGPQVGNLLLQQ 62 (310)
T ss_dssp CEEEEECCGGGGCCSSCSHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHH
T ss_pred cEEEEEEChHHhcCCCCChHHHHHHHHHHHHHHHHHHHCCCeEEEEECCcHHHhHHHHHc
Confidence 357999999933 333466666666666555666 6888888654433333
No 77
>2egx_A Putative acetylglutamate kinase; struc genomics, NPPSFA, national project on protein structural AN functional analyses; 1.92A {Thermus thermophilus} PDB: 3u6u_A
Probab=26.32 E-value=47 Score=25.26 Aligned_cols=36 Identities=14% Similarity=0.078 Sum_probs=23.1
Q ss_pred eEEeeCCcchhhhHhHHHHHHHHHHHHhhcc----ccCCchHHH
Q 047942 48 AVFKVGPCKLPDKLNGARLTLEAVKRTMDQK----IGPGAGIAL 87 (132)
Q Consensus 48 avI~VGg~Ei~erk~ri~dAlna~~aAl~~G----iVpGGG~al 87 (132)
.||++||.-+. .++...+.+..-.+.| +|.|||...
T Consensus 2 iViKlGGs~l~----~~~~~~~~i~~l~~~G~~vViVhGgg~~~ 41 (269)
T 2egx_A 2 IVVKVGGAEGI----NYEAVAKDAASLWKEGVKLLLVHGGSAET 41 (269)
T ss_dssp EEEEECCSTTC----CHHHHHHHHHHHHHHTCCEEEECCCHHHH
T ss_pred EEEEECHHHHH----HHHHHHHHHHHHHHCCCeEEEEECChHHH
Confidence 58999999443 4454555544444455 799999743
No 78
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=24.93 E-value=91 Score=18.52 Aligned_cols=35 Identities=17% Similarity=0.260 Sum_probs=26.3
Q ss_pred CHHHHHHHHHHHHHHhHhhcChHHHHHHHHHHHHhcC
Q 047942 9 SQSAIEERHSQLRSAIELSTSGYEVKLLKQRLHYLSN 45 (132)
Q Consensus 9 ~~~~i~~r~~~l~~~i~~~~~~~~~~~L~eRlarL~g 45 (132)
+++.+..=.+++...++... -+.+.|++++.+|..
T Consensus 21 ~~~EVD~FLd~v~~~~~~l~--~e~~~L~~~~~~l~~ 55 (57)
T 2wuj_A 21 DEDEVNEFLAQVRKDYEIVL--RKKTELEAKVNELDE 55 (57)
T ss_dssp EHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHC---
T ss_pred CHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHh
Confidence 78888998999988887754 567888888887754
No 79
>1rp3_B Anti sigma factor FLGM; transcription; 2.30A {Aquifex aeolicus} SCOP: a.137.11.1 PDB: 1sc5_B
Probab=24.24 E-value=69 Score=20.66 Aligned_cols=30 Identities=17% Similarity=0.217 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHhHhhcChHHHHHHHHHH
Q 047942 11 SAIEERHSQLRSAIELSTSGYEVKLLKQRL 40 (132)
Q Consensus 11 ~~i~~r~~~l~~~i~~~~~~~~~~~L~eRl 40 (132)
+.-.+||++|+.+|+.-+-.-|-+++-++|
T Consensus 54 dir~~kV~~iK~aI~~GtY~vd~~~iA~km 83 (88)
T 1rp3_B 54 KDLEKKVKELKEKIEKGEYEVSDEKVVKGL 83 (88)
T ss_dssp SSHHHHHHHHHHHHHTTCCCCCHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHcCCCCCCHHHHHHHH
Confidence 445668888888887766666666666655
No 80
>3hy0_A Alanyl-tRNA synthetase; aminoacyl-tRNA synthetase, ligase, protein biosynthesis, NUC binding, amino acid-binding, ATP-binding, metal-binding; HET: G5A EPE; 1.90A {Escherichia coli} PDB: 3hxz_A* 3hy1_A* 3hxv_A* 3hxu_A* 3hxw_A* 3hxx_A* 3hxy_A*
Probab=22.98 E-value=1.7e+02 Score=24.66 Aligned_cols=53 Identities=11% Similarity=0.179 Sum_probs=39.7
Q ss_pred HhHhhcChHHHHHH---HHHHHHhcCcceEEeeCCcchhhhHhHHHHHHHHHHHHhhccccCC
Q 047942 23 AIELSTSGYEVKLL---KQRLHYLSNTAAVFKVGPCKLPDKLNGARLTLEAVKRTMDQKIGPG 82 (132)
Q Consensus 23 ~i~~~~~~~~~~~L---~eRlarL~ggvavI~VGg~Ei~erk~ri~dAlna~~aAl~~GiVpG 82 (132)
-+....|.||-+.+ -+.+++++|.-- ..+..-.-|-|-++++.-++.+|++|+
T Consensus 246 vlQg~~snYdtDlf~pii~~i~~~~g~~~-------~~~~s~rvIADH~R~~~f~iaDGv~Ps 301 (441)
T 3hy0_A 246 VLQHVNSNYDIDLFRTLIQAVAKVTGATD-------LSNKSLRVIADHIRSCAFLIADGVMPS 301 (441)
T ss_dssp HHTTCSSGGGSHHHHHHHHHHHHHHTCCC-------TTCHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHcCCCccccchhHHHHHHHHHHHhCCCc-------cccceeEEecchHHHHHHHHhcCcccC
Confidence 35567788886543 457888887531 335567778999999999999999997
No 81
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=22.72 E-value=64 Score=21.55 Aligned_cols=60 Identities=10% Similarity=0.067 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHhHh-----hcChHHHHHHHHHHHHhcCcceEEeeCC---c--chhhhHhHHHHHHHHHHHHh
Q 047942 12 AIEERHSQLRSAIEL-----STSGYEVKLLKQRLHYLSNTAAVFKVGP---C--KLPDKLNGARLTLEAVKRTM 75 (132)
Q Consensus 12 ~i~~r~~~l~~~i~~-----~~~~~~~~~L~eRlarL~ggvavI~VGg---~--Ei~erk~ri~dAlna~~aAl 75 (132)
..+.-|.+++..|.. -.++.+|+++++-|..|.--+ . +. . +++++...++.+++.+...+
T Consensus 22 ~aEsliy~~e~~L~e~~~~dkl~~eek~~I~~~i~el~~~L---~-~~~~ad~e~ik~k~~eL~~~~~~i~~k~ 91 (120)
T 2p32_A 22 GLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWL---D-SNQTAEKEEFEHQQKDLEGLANPIISKL 91 (120)
T ss_dssp HHHHHHHHHHHHHTCTTTGGGSCHHHHHHHHHHHHHHHHHH---H-HHTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhchhhhccCCHHHHHHHHHHHHHHHHHH---H-cCCcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 455567777777753 357788888888887766432 2 22 3 67777777777777666444
No 82
>1gs5_A Acetylglutamate kinase; carbamate kinase, amino acid kinase, arginine biosynthesis, phosphoryl group transfer, protein crystallography; HET: NLG ANP; 1.5A {Escherichia coli} SCOP: c.73.1.2 PDB: 1gsj_A* 1oh9_A* 1oha_A* 1ohb_A* 2wxb_A 2x2w_A* 3t7b_A*
Probab=22.34 E-value=2.4e+02 Score=20.85 Aligned_cols=39 Identities=18% Similarity=0.208 Sum_probs=21.6
Q ss_pred ceEEeeCCcchhhhHhHHHHHHHHHHHHhhc-----cccCCchHH
Q 047942 47 AAVFKVGPCKLPDKLNGARLTLEAVKRTMDQ-----KIGPGAGIA 86 (132)
Q Consensus 47 vavI~VGg~Ei~erk~ri~dAlna~~aAl~~-----GiVpGGG~a 86 (132)
..|||+||+-+.. .++++...+.+....+. -+|.|||..
T Consensus 4 ~~ViK~GGs~l~~-~~~~~~~~~~i~~l~~~g~~~vVvV~Ggg~~ 47 (258)
T 1gs5_A 4 PLIIKLGGVLLDS-EEALERLFSALVNYRESHQRPLVIVHGGGCV 47 (258)
T ss_dssp CEEEEECGGGGGC-HHHHHHHHHHHHHHHTTCCSCEEEEECCHHH
T ss_pred cEEEEEChhHhCC-hHHHHHHHHHHHHHHHcCCCeEEEEeCCcHH
Confidence 3689999993322 13344444444333332 268999864
No 83
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=22.15 E-value=81 Score=20.66 Aligned_cols=62 Identities=13% Similarity=0.075 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHhHh-----hcChHHHHHHHHHHHHhcCcceEEeeCC--c--chhhhHhHHHHHHHHHHHHhh
Q 047942 12 AIEERHSQLRSAIEL-----STSGYEVKLLKQRLHYLSNTAAVFKVGP--C--KLPDKLNGARLTLEAVKRTMD 76 (132)
Q Consensus 12 ~i~~r~~~l~~~i~~-----~~~~~~~~~L~eRlarL~ggvavI~VGg--~--Ei~erk~ri~dAlna~~aAl~ 76 (132)
+.+..|.+++..|.. -.++.+++++++-+..+.--+ .-+- . +++++...++.+++.+...+-
T Consensus 13 ~lEs~iy~~e~~l~e~~~~~kl~~eek~~i~~~i~e~~~wL---~~~~~a~~e~i~~k~~eL~~~~~~i~~k~y 83 (113)
T 3lof_A 13 ALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWL---DANTLAEKDEFEHKRKELEQVCNPIISGLY 83 (113)
T ss_dssp HHHHHHHHHHHHHTCGGGBTTBCHHHHHHHHHHHHHHHHHH---HHCTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHH---HcCCcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455667777777743 345678888777666443221 1121 2 777777777777777664443
No 84
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=22.11 E-value=66 Score=20.97 Aligned_cols=63 Identities=3% Similarity=0.051 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHhH--h---hcChHHHHHHHHHHHHhcCcceEEeeCC--c--chhhhHhHHHHHHHHHHHHh
Q 047942 10 QSAIEERHSQLRSAIE--L---STSGYEVKLLKQRLHYLSNTAAVFKVGP--C--KLPDKLNGARLTLEAVKRTM 75 (132)
Q Consensus 10 ~~~i~~r~~~l~~~i~--~---~~~~~~~~~L~eRlarL~ggvavI~VGg--~--Ei~erk~ri~dAlna~~aAl 75 (132)
+-..+.-|.++++.|. . -.++.+|+++++-|..|.--+ .-+. . +++++...++.+++.+...+
T Consensus 6 rN~aE~~iy~~e~~L~~~e~~~kl~~~ek~~i~~~i~~l~~~L---~~~~~ad~~~i~~~~~~L~~~~~~i~~~~ 77 (113)
T 1ud0_A 6 SHMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWL---DKNQTAEKEEFEHQQKELEKVCNPIITKL 77 (113)
T ss_dssp HHHHHHHHHHHHHHHTSGGGTTTSCHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHH---HcCCccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456777788888775 1 356778888888887766422 2121 2 67777777777777666444
No 85
>3ggz_E Vacuolar protein-sorting-associated protein 46; novel MIM binding mode, phosphoprotein, coiled coil, endosome, membrane; 3.80A {Saccharomyces cerevisiae}
Probab=21.31 E-value=62 Score=17.23 Aligned_cols=18 Identities=28% Similarity=0.246 Sum_probs=13.3
Q ss_pred cChHHHHHHHHHHHHhcC
Q 047942 28 TSGYEVKLLKQRLHYLSN 45 (132)
Q Consensus 28 ~~~~~~~~L~eRlarL~g 45 (132)
-++..-++|-+||-.|-|
T Consensus 12 ~~eekEDkLAqRLRALR~ 29 (29)
T 3ggz_E 12 VDDEKEDKLAQRLRALRG 29 (29)
T ss_pred ccchhhHHHHHHHHHHcC
Confidence 456667899999977653
No 86
>3azd_A Short alpha-tropomyosin, transcription factor GCN; coiled-coil, actin-binding protein, muscle protein; 0.98A {Rattus norvegicus} PDB: 1ihq_A 2k8x_A
Probab=21.11 E-value=63 Score=17.78 Aligned_cols=19 Identities=16% Similarity=0.066 Sum_probs=15.0
Q ss_pred CHHHHHHHHHHHHHHhHhh
Q 047942 9 SQSAIEERHSQLRSAIELS 27 (132)
Q Consensus 9 ~~~~i~~r~~~l~~~i~~~ 27 (132)
.-++|.++|++++.+.+..
T Consensus 5 ~i~avKkKiq~lq~q~d~a 23 (37)
T 3azd_A 5 SLEAVRRKIRSLQEQNYHL 23 (37)
T ss_dssp -CHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4578999999999988665
No 87
>2xze_Q Charged multivesicular BODY protein 3; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=20.94 E-value=73 Score=18.12 Aligned_cols=14 Identities=21% Similarity=0.320 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHhc
Q 047942 31 YEVKLLKQRLHYLS 44 (132)
Q Consensus 31 ~~~~~L~eRlarL~ 44 (132)
.+-+.+++||+.|.
T Consensus 26 edi~~MqsRLaALR 39 (40)
T 2xze_Q 26 EALEAMQSRLATLR 39 (40)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 45678999999875
No 88
>1zau_A DNA ligase; AMP; HET: DNA AMP; 3.15A {Mycobacterium tuberculosis}
Probab=20.81 E-value=95 Score=25.02 Aligned_cols=41 Identities=17% Similarity=0.166 Sum_probs=28.7
Q ss_pred ecCCCCHHHHHHHHHHHHHHhHhhc-----------ChHHHHHHHHHHHHhc
Q 047942 4 LGGAGSQSAIEERHSQLRSAIELST-----------SGYEVKLLKQRLHYLS 44 (132)
Q Consensus 4 i~g~g~~~~i~~r~~~l~~~i~~~~-----------~~~~~~~L~eRlarL~ 44 (132)
..+.=.++.+.+|+++|+++|+... ||++=+.|..+|..|.
T Consensus 4 ~~~~~~~~~~~~~i~~L~~~l~~~~~~YY~~d~p~IsD~eYD~L~~eL~~lE 55 (328)
T 1zau_A 4 PDADQTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALE 55 (328)
T ss_dssp ----CCHHHHHTTHHHHHHHHHHHHHHHTTTCCCSSCTHHHHHHHHHHHHHH
T ss_pred CccCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHH
Confidence 3444467788899999999997644 5566678888888873
No 89
>2ahm_E Replicase NSP8, replicase polyprotein 1AB, heavy chain; SARS-COV, non-structural protein, S complex, hexadecamer, viral protein, replication; 2.40A {Sars coronavirus} SCOP: d.302.1.1
Probab=20.60 E-value=15 Score=27.98 Aligned_cols=59 Identities=8% Similarity=0.158 Sum_probs=29.9
Q ss_pred HHHHHHHhHhhcChHHHHHH----------------------HHHHHHhcCcceEEeeCCcchhhhHhHH-HHHHHHHHH
Q 047942 17 HSQLRSAIELSTSGYEVKLL----------------------KQRLHYLSNTAAVFKVGPCKLPDKLNGA-RLTLEAVKR 73 (132)
Q Consensus 17 ~~~l~~~i~~~~~~~~~~~L----------------------~eRlarL~ggvavI~VGg~Ei~erk~ri-~dAlna~~a 73 (132)
+.|+++....+.++||||.- .+|-+|+.++.-.+..| ...++ -|++|.+..
T Consensus 40 ~Kql~KA~NiAKse~drdaavqrKLerMAe~Amt~MYKeARa~drksKvvSam~~mLF~------MlrkLD~~~vn~i~~ 113 (203)
T 2ahm_E 40 LKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFT------MLRKLDNDALNNIIN 113 (203)
T ss_dssp ---CCTTTTTCSSCCSTTTHHHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHHHHHH------HHHHHCCHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH------HHHHHhHHHHHHHHH
Confidence 34566666677777776532 22333444443333333 33344 355666666
Q ss_pred HhhccccC
Q 047942 74 TMDQKIGP 81 (132)
Q Consensus 74 Al~~GiVp 81 (132)
--++|+||
T Consensus 114 ~Ar~GvvP 121 (203)
T 2ahm_E 114 NARDGCVP 121 (203)
T ss_dssp HHHTTCEE
T ss_pred HHHcCeee
Confidence 66677776
No 90
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=20.59 E-value=65 Score=17.25 Aligned_cols=11 Identities=36% Similarity=0.549 Sum_probs=5.7
Q ss_pred HHHHHHHHHhc
Q 047942 34 KLLKQRLHYLS 44 (132)
Q Consensus 34 ~~L~eRlarL~ 44 (132)
.+|++|+-||.
T Consensus 16 q~lq~r~drle 26 (32)
T 2akf_A 16 QKLQERLDRLE 26 (32)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 45555555543
No 91
>4au1_A Precorrin-8X methylmutase; isomerase, HBA; HET: P8X; 1.45A {Rhodobacter capsulatus}
Probab=20.06 E-value=54 Score=25.35 Aligned_cols=65 Identities=14% Similarity=0.113 Sum_probs=44.4
Q ss_pred CHHHHHHH-HHHHHHHhHhhcChHHHHHHHHHHHHhcCcceEEeeCCc-chhhhHhHHHHHHHHHHHHhhcc--ccCC
Q 047942 9 SQSAIEER-HSQLRSAIELSTSGYEVKLLKQRLHYLSNTAAVFKVGPC-KLPDKLNGARLTLEAVKRTMDQK--IGPG 82 (132)
Q Consensus 9 ~~~~i~~r-~~~l~~~i~~~~~~~~~~~L~eRlarL~ggvavI~VGg~-Ei~erk~ri~dAlna~~aAl~~G--iVpG 82 (132)
|+.+|+.+ -+.|+++++...-+-+.+..-+|+ |+--|. |+.+....=+||+.+.++|++.| ||.-
T Consensus 28 d~~~Ie~~SF~iI~~E~~~~~f~~~e~~Vv~R~---------IHatgDfe~~~~l~fs~~av~ag~~AL~~Ga~IvtD 96 (229)
T 4au1_A 28 DGAKIYVQSFATIRAEADLARFTPEEEVVVVRM---------IHAAGMVGLENHVRFAPGMAIAARAALEAGAPILCD 96 (229)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTSCHHHHHHHHHH---------HHHHTCTTGGGGEEECTTHHHHHHHHHHTTCCEEES
T ss_pred CHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHH---------hhcccChhhHhheeEChHHHHHHHHHHHCCCCEEEe
Confidence 67888876 466778877654333445566666 666666 76666555688999999999987 5543
Done!