BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047946
(321 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|297833576|ref|XP_002884670.1| exopolygalacturonase [Arabidopsis lyrata subsp. lyrata]
gi|297330510|gb|EFH60929.1| exopolygalacturonase [Arabidopsis lyrata subsp. lyrata]
Length = 449
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 147/391 (37%), Positives = 185/391 (47%), Gaps = 89/391 (22%)
Query: 11 VSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKY 70
S V G A L+VK GA DG TDDS AF +W+EA T+ VP G+Y
Sbjct: 59 ASVGAKVPGAKAGGASLDVKASGAKGDGKTDDSAAFMAAWKEAC---AAGSTITVPKGEY 115
Query: 71 LVSFAEFEGPCKASISFQLQGLLDLFSI-----------------DTSLSLAKGTFHGQG 113
LV EF+GPCK ++ +L G L + D +L+ K F GQG
Sbjct: 116 LVESLEFKGPCKGPVTLELNGNLKAPATVKTTKPHAGWIDFENLADFTLNGNKAIFDGQG 175
Query: 114 ETAWPLNQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKI 172
AW N C K C LP IRF L +S I I S +S+ FH+NIL C N+ L D+ I
Sbjct: 176 SLAWKANDCAKTGKCNSLPINIRFTGLTNSKIKSITSTNSKLFHMNILNCKNITLEDIGI 235
Query: 173 TAH---------------------------------ADSSKDILVSEVFCGPGQGISVGS 199
A D +++++V V CGPG GIS+GS
Sbjct: 236 DAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGS 295
Query: 200 LGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVID 259
LG+ ++ V G+TVR C T NGVR+KTWP S GIASN FEDI M+NV P++ID
Sbjct: 296 LGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSTPVLID 355
Query: 260 QLYCPYNKC----------------NIKPKDSMP--------------NIEIGNRNLVYN 289
Q YCPY C NIK + NI + + NLV+N
Sbjct: 356 QEYCPYGHCKAGVPSKVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHN 415
Query: 290 GVNVKVEGPETTSLCSNVKPTLFGKQIPATC 320
G EGP S CSN+KP L GK +PA C
Sbjct: 416 G----KEGP-AVSACSNIKPILSGKLVPAAC 441
>gi|225446732|ref|XP_002282573.1| PREDICTED: polygalacturonase [Vitis vinifera]
Length = 395
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 144/376 (38%), Positives = 191/376 (50%), Gaps = 89/376 (23%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
+ +V +GA DG +D S+A +W +A + + TV++P G Y + GPCKA I
Sbjct: 27 IFDVTKYGARTDGNSDISQALLKAWGDACS-SPVASTVMIPDGTYALGQIIIAGPCKAPI 85
Query: 86 SFQLQGLLDLFSIDTSLSLAK-----------------GTFHGQGETAWPLNQCHKNSDC 128
+F +QG + + +DTS A+ G F GQG+T W +C +S C
Sbjct: 86 NFVVQGTV-MAPVDTSRFRAEAGWITFQQIDQFTLSGDGVFDGQGKTVWG-TKCLSSSYC 143
Query: 129 -QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH------------ 175
QLP +RFNF+ +S + I S DS+ FHIN+LGC NL ++ I+A
Sbjct: 144 NQLPINLRFNFITNSMVKDITSRDSKQFHINLLGCKNLTFYNVVISAPQESLNTDGIHIG 203
Query: 176 ---------------------ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTV 214
D S+ I + V CGPG GISVGSLGK +E VVG++V
Sbjct: 204 RSSGINITDSTIETGDDCVSIGDGSEQINIQRVTCGPGHGISVGSLGKYPNEEPVVGISV 263
Query: 215 RNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKD 274
+NCT T T NGVRVKTWP SH G AS FEDIVMNNV NPI+IDQ YCP+N+CN+K
Sbjct: 264 KNCTLTNTQNGVRVKTWPASHQGTASEMHFEDIVMNNVGNPIIIDQEYCPHNQCNLKSPS 323
Query: 275 SMP------------------------------NIEIGNRNLVYNGVNVKVEGPETTSLC 304
+ ++E+G+ NL YNG EGP S C
Sbjct: 324 RIKISNVSFRNIRGTTSTQVAVKLICSQGEPCQDVELGDINLEYNG----NEGP-AMSQC 378
Query: 305 SNVKPTLFGKQIPATC 320
N+KP L G Q+P C
Sbjct: 379 KNIKPNLLGVQLPRIC 394
>gi|225447625|ref|XP_002274125.1| PREDICTED: polygalacturonase [Vitis vinifera]
Length = 395
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 142/376 (37%), Positives = 189/376 (50%), Gaps = 87/376 (23%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
+ +V +GA ADG +D S+A +W ++ + + TV++P G Y + GPCKA I
Sbjct: 27 IFDVTKYGARADGHSDISQALLKAWGDSCS-SPVASTVMIPNGTYALGQITIGGPCKAPI 85
Query: 86 SFQLQGLLDLFSIDTSLSLAK-----------------GTFHGQGETAWPLNQCHKNSDC 128
+F +QG + + +DTS A+ G F GQG+T W H
Sbjct: 86 NFVVQGTV-MAPVDTSRFKAEAGWIAFQQIDQFTLSGGGVFDGQGKTVWGRKCPHYAYCK 144
Query: 129 QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH------------- 175
QLP +RFNF+ +S + I S DS+ FHIN+LGC NL ++ I+A
Sbjct: 145 QLPINLRFNFITNSMVKDITSRDSKQFHINLLGCKNLAFYNVAISAPDESLNTDGIHIGR 204
Query: 176 --------------------ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVR 215
D S+ I + V CGPG GISVGSLGK +E VVG++V+
Sbjct: 205 SSGINITDSTIETGDDCVSIGDGSEQINIQRVTCGPGHGISVGSLGKYPNEEPVVGISVK 264
Query: 216 NCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDS 275
NCT T T NGVRVKT+P SH GIAS FEDIVMNNV NPI+IDQ YCP+N+CN+K
Sbjct: 265 NCTLTNTQNGVRVKTFPASHQGIASEMHFEDIVMNNVGNPIIIDQEYCPHNQCNLKSPSR 324
Query: 276 MP------------------------------NIEIGNRNLVYNGVNVKVEGPETTSLCS 305
+ ++E+G+ NL YNG EGP S C
Sbjct: 325 IKLSNVSFRNIRGTTSTQVAVKLLCSQGVPCQDVELGDINLKYNG----KEGP-AMSQCK 379
Query: 306 NVKPTLFGKQIPATCV 321
N+KP L G Q+P C
Sbjct: 380 NIKPNLLGVQLPRICA 395
>gi|162949338|gb|ABY21306.1| pollen allergen Pla o 2 [Platanus orientalis]
Length = 378
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 140/382 (36%), Positives = 191/382 (50%), Gaps = 88/382 (23%)
Query: 17 VRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAE 76
+RG+ ++ NV D+GA G D S+A +W A G TVL+P G Y++
Sbjct: 1 MRGVQSSGGTFNVNDYGAKGSG--DISQAVMKAWEAACASPG-PSTVLIPTGNYIMGEVL 57
Query: 77 FEGPCKAS-ISFQLQGLLDLFS---------------IDTSLSLAKGTFHGQGETAWPLN 120
EGPCK S I FQL G++ + +D KGTF GQG+ AW N
Sbjct: 58 LEGPCKGSKIGFQLDGVVKAPADVSAFKSEGWVVFNHVDGLTVSGKGTFDGQGQKAWAAN 117
Query: 121 QCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS- 178
C K+ +C + P IRFNFL ++ + I S++S+ FHIN+L C N+ + I+A S
Sbjct: 118 NCDKDENCNRPPMNIRFNFLKNAVVRDITSMNSKMFHINVLECDNISFQHVTISAPGTSI 177
Query: 179 --------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKD 206
S+++ V++V CGPG GISVGSLGK +
Sbjct: 178 NTDGIHIGLSRGVTITDTNIATGDDCVSIGPGSQNVTVTKVNCGPGHGISVGSLGKYKDE 237
Query: 207 EEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYN 266
++V G+TV CTFT TSNGVRVKTWPDS G+A++ FED+ M NV+NP+++DQ YCPY
Sbjct: 238 KDVRGITVTGCTFTGTSNGVRVKTWPDSPPGVATDMAFEDLTMKNVQNPVILDQEYCPYG 297
Query: 267 KC----------------NIKPKDSMP--------------NIEIGNRNLVYNGVNVKVE 296
+C NI+ S P N+EIG NL +
Sbjct: 298 QCSLKAPSRVKLSNIKFNNIRGTSSGPDAIVIACSHGFPCSNLEIGEINLA-----LHAA 352
Query: 297 GPETTSLCSNVKPTLFGKQIPA 318
G S C+N KP GKQ+PA
Sbjct: 353 GAPANSTCTNAKPIFSGKQVPA 374
>gi|51316214|sp|Q6H9K0.1|PGLR2_PLAAC RecName: Full=Exopolygalacturonase; AltName: Full=Pollen allergen
Pla a 2; AltName: Allergen=Pla a 2; Flags: Precursor
gi|49523394|emb|CAE52833.1| polygalacturonase [Platanus x acerifolia]
Length = 377
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 136/381 (35%), Positives = 192/381 (50%), Gaps = 88/381 (23%)
Query: 18 RGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEF 77
RG+ ++ V NV D+GA G D S+A +W+ A G TVL+P G Y +
Sbjct: 1 RGVQSSGSVFNVNDYGA--KGAGDISQAVMKAWKAACASQG-PSTVLIPKGNYNMGEVAM 57
Query: 78 EGPCKAS-ISFQLQGLL---------------DLFSIDTSLSLAKGTFHGQGETAWPLNQ 121
+GPCK S I FQ+ G++ + ID GT GQG+TAW N
Sbjct: 58 QGPCKGSKIGFQIDGVVKAPADPSKFKSDGWVSFYRIDGLTVSGTGTLDGQGQTAWAKNN 117
Query: 122 CHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-- 178
C KN +C+ +RF+FL + + I S++S+ FHIN+L C ++ + +TA S
Sbjct: 118 CDKNPNCKHAAMNLRFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSIN 177
Query: 179 -------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDE 207
S+++ +++V CGPG GIS+GSLG+ ++
Sbjct: 178 TDGIHVGISKGVTITNTKIATGDDCISIGPGSQNVTITQVNCGPGHGISIGSLGRYNNEK 237
Query: 208 EVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
EV G+TV+ CTF+ T NGVRVKTWP+S G A++ TF+D+ MNNV+NP+++DQ YCPY +
Sbjct: 238 EVRGITVKGCTFSGTMNGVRVKTWPNSPPGAATDLTFQDLTMNNVQNPVILDQEYCPYGQ 297
Query: 268 CN----------------------------IKPKDSMP--NIEIGNRNLVYNGVNVKVEG 297
C+ I MP N++IG NL Y G G
Sbjct: 298 CSRQAPSRIKLSNINFNNIRGTSTGKVAVVIACSHGMPCSNMKIGEINLSYRGA-----G 352
Query: 298 PETTSLCSNVKPTLFGKQIPA 318
TS CSNVKPT GKQ+PA
Sbjct: 353 GPATSTCSNVKPTFSGKQVPA 373
>gi|225446736|ref|XP_002282594.1| PREDICTED: polygalacturonase [Vitis vinifera]
Length = 395
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 142/376 (37%), Positives = 190/376 (50%), Gaps = 89/376 (23%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
+ +V +GA DG +D S+A +W +A + + TV++P G Y + GPCKA I
Sbjct: 27 IFDVTKYGARTDGNSDISQALLKAWGDACS-SPVASTVMIPDGTYALGQIIIAGPCKAPI 85
Query: 86 SFQLQGLLDLFSIDTSLSLAK-----------------GTFHGQGETAWPLNQCHKNSDC 128
+F +QG + + +DTS A+ G F GQG+ W +C ++ C
Sbjct: 86 NFVVQGTV-MAPVDTSRFRAEAGWITFQQIDQFTLSGDGVFDGQGKIVWG-TKCLSSAYC 143
Query: 129 -QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH------------ 175
QLP +RFNF+ +S + I S DS+ FHIN+LGC NL ++ I+A
Sbjct: 144 NQLPINLRFNFITNSMVKDITSRDSKQFHINLLGCKNLTFYNIVISAPQESLNTDGIHIG 203
Query: 176 ---------------------ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTV 214
D S+ I + V CGPG GISVGSLGK +E VVG++V
Sbjct: 204 RSSGINITDSTIETGDDCVSIGDGSEQINIQRVTCGPGHGISVGSLGKYPNEEPVVGISV 263
Query: 215 RNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKD 274
+NCT T T NGVRVKTWP SH G AS FEDIVMNNV NPI+IDQ YCP+N+CN+K
Sbjct: 264 KNCTLTNTQNGVRVKTWPASHQGTASEMHFEDIVMNNVGNPIIIDQEYCPHNQCNLKSPS 323
Query: 275 SMP------------------------------NIEIGNRNLVYNGVNVKVEGPETTSLC 304
+ ++E+G+ NL YNG EGP S C
Sbjct: 324 RIKISNVSFRNIRGTTSTQVAVKLICSQGVPCHDVELGDINLEYNG----NEGP-AMSQC 378
Query: 305 SNVKPTLFGKQIPATC 320
N+KP L G Q+P C
Sbjct: 379 KNIKPNLLGVQLPRIC 394
>gi|449453736|ref|XP_004144612.1| PREDICTED: exopolygalacturonase clone GBGA483-like [Cucumis
sativus]
gi|449506926|ref|XP_004162886.1| PREDICTED: exopolygalacturonase clone GBGA483-like [Cucumis
sativus]
Length = 402
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 140/387 (36%), Positives = 196/387 (50%), Gaps = 81/387 (20%)
Query: 9 LLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG 68
L + IT+ + D +VK +GA A+G +DDS+A +W++A + +++P G
Sbjct: 16 LFIGLITNAQAAD-----FHVKRYGARANGNSDDSQAIMKAWKDACS-STKPSKIVIPGG 69
Query: 69 KYLVSFAEFEGPCKASISFQLQGLLD---------------LFSIDTSLSLA-KGTFHGQ 112
+Y+V +F+GPC A I Q++G L +F L+L+ KGTF G+
Sbjct: 70 RYVVDSMKFQGPCLAPIHVQVEGRLQAPTNIKKMRNDASWIVFQYINGLTLSGKGTFDGR 129
Query: 113 GETAWPLNQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLK 171
G AW NQC + C LP +RF LN+S I I S DS++FH+N+ C NL L ++
Sbjct: 130 GSLAWKQNQCASSGKCGSLPISLRFYSLNNSLIKDITSTDSKFFHVNVHNCRNLTLQNIN 189
Query: 172 ITAHADS---------------------------------SKDILVSEVFCGPGQGISVG 198
I A DS S+ I V +V CGPG GIS+G
Sbjct: 190 IDAPGDSPNTDGIHIGGSSGVTIHNARIKTGDDCVSIGDGSQQIKVEKVTCGPGHGISIG 249
Query: 199 SLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVI 258
SLGK ++ V G+TVR+CT T T GVR+K+WP S GIASN FE IVMNNV PI+I
Sbjct: 250 SLGKYKNEKPVSGITVRDCTITNTMFGVRIKSWPASTKGIASNMQFESIVMNNVGTPILI 309
Query: 259 DQLYCPYNKCN--IKPKDSMPNIEIGN---------------------RNLVYNGVNVKV 295
DQ YCPY CN I + + N+ N +N+ + +N+K
Sbjct: 310 DQQYCPYGTCNRQIPSRVQISNVGFKNIRGTSTTQVAVKLVCSRGYPCKNVKLSNINLKY 369
Query: 296 EGPETTSL--CSNVKPTLFGKQIPATC 320
G T++ CSNVKP + G +P C
Sbjct: 370 SGTNGTAISECSNVKPAIAGSVVPPAC 396
>gi|302121712|gb|ADK92878.1| polygalacturonase [Hypericum perforatum]
Length = 398
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 142/399 (35%), Positives = 196/399 (49%), Gaps = 89/399 (22%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK 60
+ L + + L+ + SV I A L+VK +G DG TDDS+A + +W++A
Sbjct: 3 IRLIPQVASLLFLLHSV--ILAKALTLDVKHYGVKVDGKTDDSQAINKAWKDACAATNAT 60
Query: 61 GTVLVPPGKYLVSFAEFEGPCKASISFQLQGLLDL--------------FSIDTSLSL-A 105
T+ + G Y+VS F+GPCK+ ++ QG F+ L+L
Sbjct: 61 -TLRIGKGNYMVSKMAFQGPCKSPLTVDFQGTFKAPSNAKNYKNQEWVSFTNLNGLTLFG 119
Query: 106 KGTFHGQGETAWPLNQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYN 164
GTF GQG AW +N C K C LP +R L +S I I S+DS+ FHINI+ C N
Sbjct: 120 GGTFDGQGAVAWSINNCAKTGKCGSLPNNLRMTGLTNSIIRDITSLDSKLFHINIINCKN 179
Query: 165 LKLNDLKITAH---------------------------------ADSSKDILVSEVFCGP 191
L L + ITA D ++ I + +V CGP
Sbjct: 180 LTLERITITAPESSLNTDGIHIGRSTGVNITSATIKTGDDCVSIGDGAQQINIEKVTCGP 239
Query: 192 GQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNN 251
G GIS+GSLG+ ++ VVG+TV+NCT T T NGVR+KTWP S G+ASN FE+I+MNN
Sbjct: 240 GHGISIGSLGRYHDEQPVVGITVKNCTLTSTMNGVRIKTWPASPSGLASNMRFENIIMNN 299
Query: 252 VENPIVIDQLYCPYNKCNIKPKDSMP------------------------------NIEI 281
V NPI+IDQ YCPY++C K + N+ +
Sbjct: 300 VSNPIMIDQQYCPYSQCEAKIPSRVKISDVSFSGIRGTSATQLAVKLVCSKGIPCQNVAV 359
Query: 282 GNRNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 320
G+ NL YN +G + TS C+NVKP + G +PA C
Sbjct: 360 GDINLAYN------KG-QATSQCANVKPQVRGSVVPAPC 391
>gi|296084975|emb|CBI28390.3| unnamed protein product [Vitis vinifera]
Length = 452
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 139/370 (37%), Positives = 187/370 (50%), Gaps = 87/370 (23%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
+ +V +GA ADG +D S+A +W ++ + + TV++P G Y + GPCKA I
Sbjct: 27 IFDVTKYGARADGHSDISQALLKAWGDSCS-SPVASTVMIPNGTYALGQITIGGPCKAPI 85
Query: 86 SFQLQGLLDLFSIDTSLSLAK-----------------GTFHGQGETAWPLNQCHKNSDC 128
+F +QG + + +DTS A+ G F GQG+T W H
Sbjct: 86 NFVVQGTV-MAPVDTSRFKAEAGWIAFQQIDQFTLSGGGVFDGQGKTVWGRKCPHYAYCK 144
Query: 129 QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH------------- 175
QLP +RFNF+ +S + I S DS+ FHIN+LGC NL ++ I+A
Sbjct: 145 QLPINLRFNFITNSMVKDITSRDSKQFHINLLGCKNLAFYNVAISAPDESLNTDGIHIGR 204
Query: 176 --------------------ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVR 215
D S+ I + V CGPG GISVGSLGK +E VVG++V+
Sbjct: 205 SSGINITDSTIETGDDCVSIGDGSEQINIQRVTCGPGHGISVGSLGKYPNEEPVVGISVK 264
Query: 216 NCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDS 275
NCT T T NGVRVKT+P SH GIAS FEDIVMNNV NPI+IDQ YCP+N+CN+K
Sbjct: 265 NCTLTNTQNGVRVKTFPASHQGIASEMHFEDIVMNNVGNPIIIDQEYCPHNQCNLKSPSR 324
Query: 276 MP------------------------------NIEIGNRNLVYNGVNVKVEGPETTSLCS 305
+ ++E+G+ NL YNG EGP S C
Sbjct: 325 IKLSNVSFRNIRGTTSTQVAVKLLCSQGVPCQDVELGDINLKYNG----KEGP-AMSQCK 379
Query: 306 NVKPTLFGKQ 315
N+KP L G++
Sbjct: 380 NIKPNLLGQE 389
>gi|302143491|emb|CBI22052.3| unnamed protein product [Vitis vinifera]
Length = 1080
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 141/373 (37%), Positives = 189/373 (50%), Gaps = 89/373 (23%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
+ +V +GA DG +D S+A +W +A + + TV++P G Y + GPCKA I
Sbjct: 27 IFDVTKYGARTDGNSDISQALLKAWGDACS-SPVASTVMIPDGTYALGQIIIAGPCKAPI 85
Query: 86 SFQLQGLLDLFSIDTSLSLAK-----------------GTFHGQGETAWPLNQCHKNSDC 128
+F +QG + + +DTS A+ G F GQG+ W +C ++ C
Sbjct: 86 NFVVQGTV-MAPVDTSRFRAEAGWITFQQIDQFTLSGDGVFDGQGKIVWG-TKCLSSAYC 143
Query: 129 -QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH------------ 175
QLP +RFNF+ +S + I S DS+ FHIN+LGC NL ++ I+A
Sbjct: 144 NQLPINLRFNFITNSMVKDITSRDSKQFHINLLGCKNLTFYNIVISAPQESLNTDGIHIG 203
Query: 176 ---------------------ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTV 214
D S+ I + V CGPG GISVGSLGK +E VVG++V
Sbjct: 204 RSSGINITDSTIETGDDCVSIGDGSEQINIQRVTCGPGHGISVGSLGKYPNEEPVVGISV 263
Query: 215 RNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKD 274
+NCT T T NGVRVKTWP SH G AS FEDIVMNNV NPI+IDQ YCP+N+CN+K
Sbjct: 264 KNCTLTNTQNGVRVKTWPASHQGTASEMHFEDIVMNNVGNPIIIDQEYCPHNQCNLKSPS 323
Query: 275 SMP------------------------------NIEIGNRNLVYNGVNVKVEGPETTSLC 304
+ ++E+G+ NL YNG EGP S C
Sbjct: 324 RIKISNVSFRNIRGTTSTQVAVKLICSQGVPCHDVELGDINLEYNG----NEGP-AMSQC 378
Query: 305 SNVKPTLFGKQIP 317
N+KP L G Q+P
Sbjct: 379 KNIKPNLLGVQLP 391
>gi|449532115|ref|XP_004173029.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 423
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 136/372 (36%), Positives = 190/372 (51%), Gaps = 85/372 (22%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
V ++ +GA + D + A ++W+EA VL+P G Y +S + +GPCK+ I
Sbjct: 48 VFDITKYGAKPNA--DITAALTSAWKEAC-ASTTPSKVLIPKGSYGLSQSNLKGPCKSPI 104
Query: 86 SFQLQG------------LLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDC-QLPT 132
Q++G LL L + D G GQG+ W N CH +C +LP
Sbjct: 105 ELQIEGTLQAPAHPEGEGLLILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPM 164
Query: 133 PIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH----------------- 175
++ NF+ +S +TGI S+DS+ FHIN+LGC NL + + ITA
Sbjct: 165 NLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQI 224
Query: 176 ----------------ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTF 219
DS+K + +S+V CGPG GIS+GSLGK K++EVVG+TV+ C
Sbjct: 225 NILNTNIATGDDCISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKL 284
Query: 220 TCTSNGVRVKTWPDSHIGI-ASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKP------ 272
T T+NGVR+KTWPDS + A++ FEDI M+NV NPI+IDQ YCP+N+CN K
Sbjct: 285 TGTTNGVRIKTWPDSAVAFPATDMHFEDIEMDNVSNPIIIDQEYCPWNQCNRKVASKIKI 344
Query: 273 ----------------------KDSMP--NIEIGNRNLVYNGVNVKVEGPETTSLCSNVK 308
S+P +EI + +L Y+G EGP S C+NVK
Sbjct: 345 SNVSFKNIRGTSATAIAVKIVCSKSIPCEGVEIADIDLTYSG----PEGP-IKSQCANVK 399
Query: 309 PTLFGKQIPATC 320
P + GKQ P C
Sbjct: 400 PVITGKQNPPIC 411
>gi|302143489|emb|CBI22050.3| unnamed protein product [Vitis vinifera]
Length = 414
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 141/369 (38%), Positives = 187/369 (50%), Gaps = 89/369 (24%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
+ +V +GA DG +D S+A +W +A + + TV++P G Y + GPCKA I
Sbjct: 27 IFDVTKYGARTDGNSDISQALLKAWGDACS-SPVASTVMIPDGTYALGQIIIAGPCKAPI 85
Query: 86 SFQLQGLLDLFSIDTSLSLAK-----------------GTFHGQGETAWPLNQCHKNSDC 128
+F +QG + + +DTS A+ G F GQG+T W +C +S C
Sbjct: 86 NFVVQGTV-MAPVDTSRFRAEAGWITFQQIDQFTLSGDGVFDGQGKTVWG-TKCLSSSYC 143
Query: 129 -QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH------------ 175
QLP +RFNF+ +S + I S DS+ FHIN+LGC NL ++ I+A
Sbjct: 144 NQLPINLRFNFITNSMVKDITSRDSKQFHINLLGCKNLTFYNVVISAPQESLNTDGIHIG 203
Query: 176 ---------------------ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTV 214
D S+ I + V CGPG GISVGSLGK +E VVG++V
Sbjct: 204 RSSGINITDSTIETGDDCVSIGDGSEQINIQRVTCGPGHGISVGSLGKYPNEEPVVGISV 263
Query: 215 RNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKD 274
+NCT T T NGVRVKTWP SH G AS FEDIVMNNV NPI+IDQ YCP+N+CN+K
Sbjct: 264 KNCTLTNTQNGVRVKTWPASHQGTASEMHFEDIVMNNVGNPIIIDQEYCPHNQCNLKSPS 323
Query: 275 SMP------------------------------NIEIGNRNLVYNGVNVKVEGPETTSLC 304
+ ++E+G+ NL YNG EGP S C
Sbjct: 324 RIKISNVSFRNIRGTTSTQVAVKLICSQGEPCQDVELGDINLEYNG----NEGP-AMSQC 378
Query: 305 SNVKPTLFG 313
N+KP L G
Sbjct: 379 KNIKPNLLG 387
>gi|3024386|sp|Q39786.1|PGLR_GOSHI RecName: Full=Polygalacturonase; Short=PG; AltName: Full=Pectinase;
Flags: Precursor
gi|606650|gb|AAA82167.1| polygalacturonase [Gossypium hirsutum]
Length = 407
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 142/392 (36%), Positives = 190/392 (48%), Gaps = 76/392 (19%)
Query: 2 LLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKG 61
++ + F LL+ FI++ + V V FGA ADG TD SK F +W+EA
Sbjct: 7 IVPSMFVLLLLFISASKVQSDAFDV--VAKFGAKADGKTDLSKPFLDAWKEAC-ASVTPS 63
Query: 62 TVLVPPGKYLVSFAEFEGPCKASISFQLQGLLD---------------LFSIDTSLSLAK 106
TV++P G YL+S EGPCKA I +QG + +S++
Sbjct: 64 TVVIPKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPNWVRFYSVENFKMFGG 123
Query: 107 GTFHGQGETAWPLNQC-HKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNL 165
G F GQG A+ N C ++ +LP IRF+FL ++ I I S DS+ FHIN+ C N+
Sbjct: 124 GIFDGQGSIAYEKNTCENREFRSKLPVNIRFDFLTNALIQDITSKDSKLFHINVFACKNI 183
Query: 166 KLNDLKITAH---------------------------------ADSSKDILVSEVFCGPG 192
L LKI A D +K++++ E+ CGPG
Sbjct: 184 TLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMVIKEITCGPG 243
Query: 193 QGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNV 252
GIS+GSLGK +E V G+ + NCT T TSNG R+KTWP H G S FEDI MNNV
Sbjct: 244 HGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGGAVSEIHFEDITMNNV 303
Query: 253 ENPIVIDQLYCPYNKC--NIKPKDSMPNIEIGN---------------------RNLVYN 289
+PI+IDQ YCP+NKC N + K + NI N +N+
Sbjct: 304 SSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAIKFICSGSSPCQNVELA 363
Query: 290 GVNVKVEGPE-TTSLCSNVKPTLFGKQIPATC 320
+++K G E TS C NVKP GK P C
Sbjct: 364 DIDIKHNGAEPATSQCLNVKPITSGKLNPIPC 395
>gi|300193452|gb|ADJ68232.1| exo-polygalacturonase [Brassica rapa subsp. campestris]
Length = 476
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 138/375 (36%), Positives = 180/375 (48%), Gaps = 87/375 (23%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
L+VK GA DG TDD+ AF W+ A G T+ VP G YLV+ EF GPCK ++
Sbjct: 100 LDVKAAGAKGDGTTDDTAAFTAVWKTACEAPG-PSTITVPKGDYLVNNIEFLGPCKGPVT 158
Query: 87 FQLQGLLDLFSI-----------------DTSLSLAKGTFHGQGETAWPLNQCHKNSDC- 128
F++ G + + D +L+ F GQG AW N C K C
Sbjct: 159 FEMSGNMKAPATVAAVKPNSGWVDFTNLADFTLNGNGAIFDGQGSLAWKANDCAKTGKCN 218
Query: 129 QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH------------- 175
LP IRF L +S I GI S +S+ FH+N+L C N+ L ++ I A
Sbjct: 219 SLPINIRFTGLTNSKIIGITSTNSKLFHMNVLNCKNVTLENIGIDAPPESLNTDGIHIGR 278
Query: 176 --------------------ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVR 215
D +++++V V CGPG GI+VGSLG+ ++ V G+TVR
Sbjct: 279 SVGVNLIGAKVKTGDDCVSIGDGTENLIVENVECGPGHGIAVGSLGRYPNEQPVRGVTVR 338
Query: 216 NCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC------- 268
C TSNGVR+KTWP S GIASN FEDI M+NV PI+IDQ YCPY C
Sbjct: 339 KCLIKNTSNGVRIKTWPGSPPGIASNIIFEDITMDNVSTPILIDQEYCPYADCKAGVPSK 398
Query: 269 ---------NIKPKDSMP--------------NIEIGNRNLVYNGVNVKVEGPETTSLCS 305
NIK + N+ + N NLV+NG EGP + C+
Sbjct: 399 VKLSDVTFKNIKGTSATKTAVKLICSVGTPCTNVALANINLVHNG----PEGPAVGA-CA 453
Query: 306 NVKPTLFGKQIPATC 320
N+KP L G+ IP C
Sbjct: 454 NMKPVLTGQMIPPAC 468
>gi|310753534|gb|ADP09681.1| polygalacturonase [Cucurbita pepo]
Length = 416
Score = 216 bits (551), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 145/403 (35%), Positives = 197/403 (48%), Gaps = 95/403 (23%)
Query: 6 RFSLLVSFIT---------SVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNW 56
R LL F+ S + AT+ V ++ FGA + D ++A +W+EA
Sbjct: 10 RMGLLSKFMALIPLLLLLVSNATVGATSGVFDITTFGAKPNA--DATQALADAWKEAC-A 66
Query: 57 DGIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLLDLFSIDTS------------LSL 104
VLVP G Y + + +GPCK+ I ++G L DT L+L
Sbjct: 67 SATPSKVLVPKGTYQLGESRLKGPCKSPIELLVEGTLQASPTDTEGDGLLVMEYIDHLTL 126
Query: 105 A-KGTFHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGC 162
+ G F GQG+ W N CH +C+ LP ++FNF+ +S + I S+DS+ FHIN+L
Sbjct: 127 SGTGVFDGQGKAGWEKNDCHLKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLAG 186
Query: 163 YNLKLNDLKITA----------HADSSKD-----------------------ILVSEVFC 189
NL + LKITA H S+D I +S+V C
Sbjct: 187 KNLTFDHLKITAPHNSPNTDGIHLGDSEDVYILNTAIATGDDCISVGYTNRKITISDVTC 246
Query: 190 GPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGI-ASNFTFEDIV 248
GPG GIS+GSLGK ++EVVG+TV+ C T+NGVR+K+WPDS + AS+ FEDI
Sbjct: 247 GPGHGISIGSLGKYKTEKEVVGVTVKKCKLIGTTNGVRIKSWPDSAVSYPASDMHFEDIE 306
Query: 249 MNNVENPIVIDQLYCPYNKC----------------NIKPKDSMP--------------N 278
M NV NPI+IDQ YCP+N+C NI+ S P
Sbjct: 307 MENVANPIIIDQEYCPWNQCNRKVPSAIKISKVSFKNIRGTSSTPVAVKLVCSKSNPCEG 366
Query: 279 IEIGNRNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 321
+EI + +L Y+G EGP S CSNVKPT+ GKQ P C
Sbjct: 367 VEIADIDLTYSG----KEGP-AVSECSNVKPTISGKQNPPICA 404
>gi|3024385|sp|Q39766.1|PGLR_GOSBA RecName: Full=Polygalacturonase; Short=PG; AltName: Full=Pectinase;
Flags: Precursor
gi|606652|gb|AAA58322.1| polygalacturonase [Gossypium barbadense]
Length = 407
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 139/398 (34%), Positives = 190/398 (47%), Gaps = 88/398 (22%)
Query: 2 LLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKG 61
++ + F LL+ FI++ + V V FGA ADG TD SK F +W+EA
Sbjct: 7 IVPSMFVLLLLFISASKVQPDAFDV--VAKFGAKADGKTDLSKPFLDAWKEAC-ASVTPS 63
Query: 62 TVLVPPGKYLVSFAEFEGPCKASISFQLQGLLD---------------LFSIDTSLSLAK 106
TV++P G YL+S EGPCKA I +QG + +S++
Sbjct: 64 TVVIPKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPNWVRFYSVENFKMFGG 123
Query: 107 GTFHGQGETAWPLNQC-HKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNL 165
G F GQG A+ N C ++ +LP IRF+F+ ++ I I S DS+ FHIN+ C N+
Sbjct: 124 GIFDGQGSIAYEKNTCENREFRSKLPVNIRFDFVTNALIQDITSKDSKLFHINVFACKNI 183
Query: 166 KLNDLKITAH---------------------------------ADSSKDILVSEVFCGPG 192
L LKI A D +K++++ E+ CGPG
Sbjct: 184 TLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMVIKEITCGPG 243
Query: 193 QGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNV 252
GIS+GSLGK +E V G+ + NCT T TSNG R+KTWP H G S FEDI MNNV
Sbjct: 244 HGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGGAVSEIHFEDITMNNV 303
Query: 253 ENPIVIDQLYCPYNKC----------------NIKPKDSMP--------------NIEIG 282
+PI+IDQ YCP+NKC NI+ ++P N+E+
Sbjct: 304 SSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAIKFICSGSSPCQNVELA 363
Query: 283 NRNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 320
+ ++ +NG TS C NVKP GK P C
Sbjct: 364 DIDIQHNGAE------PATSQCLNVKPITIGKLNPIPC 395
>gi|242093572|ref|XP_002437276.1| hypothetical protein SORBIDRAFT_10g024020 [Sorghum bicolor]
gi|241915499|gb|EER88643.1| hypothetical protein SORBIDRAFT_10g024020 [Sorghum bicolor]
Length = 404
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 122/301 (40%), Positives = 161/301 (53%), Gaps = 52/301 (17%)
Query: 20 IDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEG 79
+ A RV NV DFGAVADG TDDS+AF +W +A G + V+VP G YL+ F G
Sbjct: 25 VAAAGRVFNVSDFGAVADGRTDDSEAFLRAWTKACATPG-RAAVVVPRGDYLLHPLVFRG 83
Query: 80 PCKASISFQLQGLL----------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCH 123
PCK + + G+L SID L GTF G+G TAWPLNQC
Sbjct: 84 PCKGYMEVHVAGVLRAPPGLAAFRGCREWVHFSSIDGLLVTGGGTFDGRGATAWPLNQCP 143
Query: 124 KNSDCQL-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---- 178
+ DC+L PT I+ + ++TITG+ S+DS++FH+ ++G +++ ++ + I A S
Sbjct: 144 QKRDCKLLPTSIKLGLVRNATITGVTSLDSKFFHVTVVGSHDVAIHRVSIRAPRSSPNTD 203
Query: 179 -----------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEV 209
+ D++VS V CGPG GISVGSLG+ +E+V
Sbjct: 204 GVHIQGSSNVRVTDSAVATGDDCVSVGPGASDVVVSGVSCGPGHGISVGSLGRYPGEEDV 263
Query: 210 VGLTVRNCTFTCTSNGVRVKTWPDSHIGIA-SNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
L V NCT TSNGVR+KTW A + FEDIVM V NPI+IDQ YCPY C
Sbjct: 264 RRLRVANCTLAGTSNGVRIKTWRGGTWPTAVTGLVFEDIVMRKVHNPIIIDQEYCPYASC 323
Query: 269 N 269
Sbjct: 324 R 324
>gi|225423446|ref|XP_002273801.1| PREDICTED: exopolygalacturonase [Vitis vinifera]
gi|297738101|emb|CBI27302.3| unnamed protein product [Vitis vinifera]
Length = 396
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 140/394 (35%), Positives = 189/394 (47%), Gaps = 84/394 (21%)
Query: 6 RFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLV 65
R LL+ VR +V NV ++GA+A+G D+S+A +W EA +W G G VL+
Sbjct: 9 RIFLLIILFVWVRDAQGQLKVFNVMNYGAIANGHYDNSEALGRAWNEACHWKG-TGVVLI 67
Query: 66 PPGKYLVSFAEFEGPCKASISFQLQG---------------LLDLFSIDTSLSLAKGTFH 110
P G Y+V +F+GPC F G + ID G+F+
Sbjct: 68 PRGTYMVHPVKFQGPCSGRTMFLNTGEVLAPTDPALIHADNWIAFQEIDGLRVSGGGSFN 127
Query: 111 GQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLND 169
GQGE W N CHKN +C+ L + + F F+ + I I S++S+ FH NI + +N
Sbjct: 128 GQGEKVWHNNVCHKNYNCKPLSSSLSFKFVTNGRIDHITSINSKMFHFNIYDNQKISINH 187
Query: 170 LKITAHADS---------------------------------SKDILVSEVFCGPGQGIS 196
+KI A A+S S+DI + V CGPG GIS
Sbjct: 188 VKILAPAESPNTDGIHIGRSNDIRITNSEIRTGDDCISLKQGSRDIHIQNVQCGPGHGIS 247
Query: 197 VGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPI 256
VGSLGK +EEV G+TVRNCTF + NG+R+KTW S IAS+FTFEDIV+ NV NPI
Sbjct: 248 VGSLGKDEGEEEVRGITVRNCTFQGSDNGLRIKTWAASTRNIASDFTFEDIVVENVRNPI 307
Query: 257 VIDQLYCPYNKC---------------NIKPKDSMP--------------NIEIGNRNLV 287
IDQ YCP+ C NI+ S +IE+ N +LV
Sbjct: 308 NIDQEYCPHPPCNEGESQVEIKNVKFRNIRGTSSTKVAVSLICSSRIPCSDIELHNIDLV 367
Query: 288 YNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 321
Y+ +G TS C +V G Q P +C+
Sbjct: 368 YHD-----QGGPATSSCRHVNGVSSGVQRPPSCI 396
>gi|129941|sp|P24548.1|PGLR_OENOR RecName: Full=Exopolygalacturonase; Short=ExoPG; AltName:
Full=Galacturan 1,4-alpha-galacturonidase; AltName:
Full=Pectinase
gi|256552|gb|AAB23476.1| polygalacturonase homolog {clone P22} [Oenothera organensis,
pollen, Peptide, 362 aa]
Length = 362
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 133/360 (36%), Positives = 179/360 (49%), Gaps = 86/360 (23%)
Query: 41 DDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLL------- 93
D ++A T+W+EA T+LVP G + V EGPCK+SI QLQG L
Sbjct: 1 DSTQALTTAWKEAC-ASASPSTILVPKGNFAVGLITLEGPCKSSIGLQLQGTLKAPADPS 59
Query: 94 --------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSD-CQ-LPTPIRFNFLNDST 143
+L ID G F GQG++AW N CHKN C+ L +R + +S
Sbjct: 60 KIKGLGWINLNKIDLLTIFGGGVFDGQGKSAWVQNDCHKNGPICKTLSMNLRLYAVTNSI 119
Query: 144 ITGIKSVDSRYFHINILGCYNLKLNDLKITAH---------------------------- 175
+ + ++DS+ FH+N++GC NL KI+A
Sbjct: 120 LRDVTTLDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGVNIINTEIKTGD 179
Query: 176 -----ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKT 230
D SK+I ++ + CGPG GISVGSLG+ +E VVG+ V+NCT T + NGVR+KT
Sbjct: 180 DCISLGDGSKNINITNITCGPGHGISVGSLGRYKNEESVVGIYVKNCTITGSQNGVRIKT 239
Query: 231 WPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC----------------NIKP-- 272
WP S G AS F+DI MN+V PI+IDQ YCPYN+C NIK
Sbjct: 240 WPKSEPGEASEMHFQDITMNSVGTPILIDQGYCPYNQCTAEVPSSVKLSKISFKNIKGTS 299
Query: 273 ----------KDSMP--NIEIGNRNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 320
S P +E+ + +L Y+G +G TS+C N+KPT+ GKQIPA C
Sbjct: 300 TTKEAVKLVCSKSFPCNGVELADIDLTYSG-----KGGPATSVCENIKPTIKGKQIPAIC 354
>gi|224106375|ref|XP_002314146.1| predicted protein [Populus trichocarpa]
gi|222850554|gb|EEE88101.1| predicted protein [Populus trichocarpa]
Length = 395
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 137/376 (36%), Positives = 192/376 (51%), Gaps = 89/376 (23%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKAS 84
R+ NVK +GA+ DG T++SKAF +W+ A W+G K VLVP G YL+ +FEG CK
Sbjct: 25 RIFNVKKYGAIPDGKTENSKAFLEAWKNACKWNG-KAVVLVPAGTYLLDSVKFEGECKGY 83
Query: 85 ISFQLQG-------LLDL-----FSIDTSLSLA-KGTFHGQGETAWPLNQCHKNSDCQ-L 130
+ F+++G L D+ F L++A +GTF GQG WP C N CQ L
Sbjct: 84 MIFKVKGNVMAASKLKDINQWITFKYVNGLTVAGRGTFDGQGYKVWP---CKINGRCQTL 140
Query: 131 PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------ 178
P +R F+ + + I+S++S+ H++I NL + ++K++A DS
Sbjct: 141 PISLRLEFIRNGKLQNIRSINSQNAHVSIFASSNLNITNVKLSAPQDSPNTDGIKISSSE 200
Query: 179 ---------------------SKDILVSEVFCGPGQGISVGSLGKGI---KDEEVVGLTV 214
SK+ +S+VFCGPG GISVGS+G + VVGL V
Sbjct: 201 EIRITRTSISTGDDCVAILNGSKNTHISQVFCGPGHGISVGSMGGNTLIDNKDIVVGLAV 260
Query: 215 RNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKD 274
N TFT TSNG+R+KTW + G+AS FT+EDI+MN+VE+PI+IDQ YCP + C+ K
Sbjct: 261 TNSTFTNTSNGLRIKTWASRYEGLASGFTYEDIIMNDVEHPIIIDQQYCPSSSCDSKTAS 320
Query: 275 SM------------------------------PNIEIGNRNLVYNGVNVKVEGPETTSLC 304
+ NI + + LVY G EGP +S+C
Sbjct: 321 RIQIRDITYSNIRGTSKSKAAVTLNCSSIVPCKNIVLKDIRLVYTG----NEGP-ASSIC 375
Query: 305 SNVKPTLFGKQIPATC 320
SNV +G Q P C
Sbjct: 376 SNVHGYSYGLQNPPPC 391
>gi|6714526|dbj|BAA89477.1| polygalacturonase [Salix gilgiana]
Length = 393
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 134/377 (35%), Positives = 191/377 (50%), Gaps = 89/377 (23%)
Query: 23 TNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCK 82
+N V +V +G G D ++A + +W++A VL+P G Y + GPCK
Sbjct: 27 SNGVFDVTKYG----GKEDITEALNNAWKDACASTN-PSKVLIPSGTYSLRQVTLAGPCK 81
Query: 83 ASISFQLQGLL------DLFS---------IDTSLSLAKGTFHGQGETAWPLNQCHKNSD 127
A+I Q+ G+L D FS ID GTF GQG AW + C KN +
Sbjct: 82 AAIELQVNGILKAPVNPDQFSGSHWVNFRYIDQLTLSGSGTFDGQGNVAWSKSTCSKNKN 141
Query: 128 CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-------- 178
C+ LP IRF+F+ + + I + DS+ FH+N+LGC NL +TA A+S
Sbjct: 142 CEGLPMNIRFDFITNGLVRDITTRDSKNFHVNVLGCKNLTFQHFTVTAPAESINTDGIHI 201
Query: 179 -------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLT 213
++++ V+ V CGPG GISVGSLG+ ++ V G+
Sbjct: 202 GRSTGIYIIDSKIGTGDDCISVGDGTEELHVTGVTCGPGHGISVGSLGRYPNEKPVSGIF 261
Query: 214 VRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC----- 268
V+NCT + T+NGVR+K+WPD + G+ASN FEDIVMNNV+NPI++DQ+YCP+N+C
Sbjct: 262 VKNCTISNTANGVRIKSWPDLYGGVASNMHFEDIVMNNVQNPILLDQVYCPWNQCSLKAP 321
Query: 269 -----------NIKPKDSMP--------------NIEIGNRNLVYNGVNVKVEGPETTSL 303
NI+ + P +E+ N NL+Y+G EGP S
Sbjct: 322 SKVKISDVSFKNIRGTSATPVVVKLACSSGIPCEKVELANINLLYSG----SEGP-AKSQ 376
Query: 304 CSNVKPTLFGKQIPATC 320
CSNVKP + G + C
Sbjct: 377 CSNVKPKISGIMSASGC 393
>gi|359485801|ref|XP_003633337.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Vitis
vinifera]
Length = 396
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 143/377 (37%), Positives = 184/377 (48%), Gaps = 88/377 (23%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
+ +V +GA ADG TD S+A +W +A + + TV+ P G + + GPCK I
Sbjct: 27 IFDVTKYGARADGNTDISQALLKAWGDACS-SPVASTVMTPDGXHALGQITIGGPCKDPI 85
Query: 86 SFQLQG----LLD------------LFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDC- 128
+F +QG L+D ID G F GQG+T W +C ++ C
Sbjct: 86 NFIVQGSVKALMDTSRFKAXAGWIAFRQIDQFTLSGGGVFDGQGKTVWG-TKCPSSAYCN 144
Query: 129 QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH------------- 175
QLP +RFNF+ +S + I S DS FHIN+LGC NL ++ I+A
Sbjct: 145 QLPINLRFNFITNSMVKNITSRDSNQFHINLLGCKNLTFYNVAISAPEERLNTDGIHIGR 204
Query: 176 --------------------ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVR 215
D S+ I + V GPG G SVGSLGK +E VVG++V+
Sbjct: 205 SLGINITYSTIETGDDCVSIGDGSEQINMQRVTRGPGHGXSVGSLGKXPNEEPVVGISVK 264
Query: 216 NCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC-PYNKCNIK-PK 273
NC T T NGVRVKTWP SH G AS FEDIVMNNV NPI+IDQ YC P+N+CN+K P
Sbjct: 265 NCNLTNTQNGVRVKTWPASHQGTASEMHFEDIVMNNVGNPIIIDQEYCRPHNQCNLKIPS 324
Query: 274 DSMPN-----------------------------IEIGNRNLVYNGVNVKVEGPETTSLC 304
M N +E+G+ NL YNG EG S C
Sbjct: 325 RIMLNDVSFRNIRGTTSTQVAVKLVCSQGVPREDVELGDINLKYNG----KEG-HAMSQC 379
Query: 305 SNVKPTLFGKQIPATCV 321
N+KP L G Q+P TC
Sbjct: 380 KNIKPNLLGTQLPRTCA 396
>gi|449526299|ref|XP_004170151.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 404
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 140/398 (35%), Positives = 193/398 (48%), Gaps = 89/398 (22%)
Query: 1 LLLAARFSLLVSFITSVRG-IDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGI 59
LL+ L+SF R +D + +++ +G + G D ++A +W +A D
Sbjct: 9 LLVTTFLMSLLSFTIEARSHVD----IFSLRKYGNIVSG-ADVTEALKDAWNDACASDR- 62
Query: 60 KGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLLDL-----------FSIDTSLSLAKG- 107
V++P G + V EF+GPCK+ I F++ G L F+ L L+ G
Sbjct: 63 PSAVVIPKGTFKVREGEFKGPCKSPIEFRVHGTLQAPKHPHGDSWITFAYVDRLRLSGGG 122
Query: 108 TFHGQGETAWPLNQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLK 166
F GQG+ W N CHK DC +LP +RF+F+ +S + I S+DS+ FH+NILGC NL
Sbjct: 123 VFDGQGKAGWEKNDCHKRIDCAKLPISLRFDFITNSIVRRITSLDSKNFHVNILGCNNLT 182
Query: 167 LNDLKITAH---------------------------------ADSSKDILVSEVFCGPGQ 193
+ I A D SK I V+ V CGPG
Sbjct: 183 FQGVNIIAPENSPNTDGIHIGRSIGISILKSRIATGDDCISLGDGSKRIKVNNVICGPGH 242
Query: 194 GISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHI-GIASNFTFEDIVMNNV 252
GIS+GSLGK +E V G+ V NCT T+NGVR+KTWP S + GIA+N F DI M NV
Sbjct: 243 GISIGSLGKYNNEEPVEGVIVNNCTIINTTNGVRIKTWPASPVAGIATNMHFSDITMVNV 302
Query: 253 ENPIVIDQLYCPYNKC----------------NIKPKDSMP--------------NIEIG 282
NPI+IDQ YCP+N+C NI+ + P +++
Sbjct: 303 SNPILIDQEYCPWNQCNREIPSNIKINKVSFKNIRGSSATPVAVKLICSSNLPCEEVKVA 362
Query: 283 NRNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 320
N +LVYNG+ + TS C NVKP + G Q P C
Sbjct: 363 NIDLVYNGIKGSI-----TSECMNVKPIISGIQNPPIC 395
>gi|449500199|ref|XP_004161033.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
Length = 405
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 138/391 (35%), Positives = 190/391 (48%), Gaps = 87/391 (22%)
Query: 7 FSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP 66
SLL I S +D + ++ +G + G D ++A +W +A V++P
Sbjct: 16 MSLLSFTIESQSHVDV---IFPLRKYGNIVSG-DDVTEALKDAWNDAC-ASVRPSAVVIP 70
Query: 67 PGKYLVSFAEFEGPCKASISFQLQGLLD------------LFSIDTSLSLAKGTFHGQGE 114
G + V EF+GPCK+ I +++G L +D KG F GQG+
Sbjct: 71 DGIFKVREGEFKGPCKSPIEIRVRGTLQAPKHPHGDSWITFAYVDRMTISGKGVFDGQGK 130
Query: 115 TAWPLNQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKIT 173
W N CHK DC LP +RF+F+ +S + GI S+DS+ FH+NILGC NL + I
Sbjct: 131 AGWEKNDCHKRIDCVNLPISLRFDFITNSIVRGITSLDSKNFHVNILGCNNLTFQGVNII 190
Query: 174 AHADS---------------------------------SKDILVSEVFCGPGQGISVGSL 200
A DS SK + ++ V CGPG GIS+GSL
Sbjct: 191 APEDSPNTDGIHIGRSIGISILKSRIATGDDCISLGDGSKRVKITNVTCGPGHGISIGSL 250
Query: 201 GKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHI-GIASNFTFEDIVMNNVENPIVID 259
GK +E V + V+NCT T+NG+R+KTWP S + GIA+N F DI M NV NPI+ID
Sbjct: 251 GKYTNEEPVDDVVVKNCTIMNTTNGIRIKTWPSSPVAGIATNMHFSDITMVNVSNPILID 310
Query: 260 QLYCPYNKC----------------NIKPKDSMP--------------NIEIGNRNLVYN 289
Q YCP+N+C NIK + P +++ N +LVYN
Sbjct: 311 QEYCPWNQCNREIPSNIKINNVSFKNIKGSSATPVAVKLICSSNKPCEEVKVANIDLVYN 370
Query: 290 GVNVKVEGPETTSLCSNVKPTLFGKQIPATC 320
G+N GP TS C NVKP + G Q P+ C
Sbjct: 371 GIN----GP-VTSQCMNVKPIISGIQNPSIC 396
>gi|226502008|ref|NP_001152243.1| polygalacturonase precursor [Zea mays]
gi|195654209|gb|ACG46572.1| polygalacturonase precursor [Zea mays]
gi|413943666|gb|AFW76315.1| polygalacturonase [Zea mays]
Length = 403
Score = 210 bits (535), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 121/301 (40%), Positives = 160/301 (53%), Gaps = 59/301 (19%)
Query: 24 NRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKA 83
RV NV DFGAVADG TDDS+AF +W EA G + V+VP G YL+ F GPC+
Sbjct: 27 GRVFNVSDFGAVADGRTDDSEAFLRAWTEACATPG-RPAVVVPRGDYLLHPLVFRGPCRG 85
Query: 84 SISFQLQGLL----------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSD 127
+ + G+L SID L GTF G+G TAWPLN+C + D
Sbjct: 86 YVEVHVGGVLRAPPGLAAFRGCREWVHFSSIDGLLVTGGGTFDGRGATAWPLNECPQKRD 145
Query: 128 CQL-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-------- 178
C+L PT I+ + ++TITG+ S+DS++FH+ ++G +++++ + I A S
Sbjct: 146 CRLLPTSIKLGLVRNATITGVTSLDSKFFHVAVVGSQDVRIHGVSIRAPRSSPNTDGVHI 205
Query: 179 -------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLT 213
S D+LVS V CGPG GISVGSLG+ + +V L
Sbjct: 206 QGSSNVRVTDSAVATGDDCVSVGPGSSDVLVSGVACGPGHGISVGSLGRYPGEGDVRRLR 265
Query: 214 VRNCTFTCTSNGVRVKT-----WPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
V NCT TSNGVR+KT WP + + + FEDIVM V NPI+IDQ YCPY C
Sbjct: 266 VANCTVAGTSNGVRIKTWRGGSWPPTAV---AGLVFEDIVMRKVRNPIIIDQEYCPYPSC 322
Query: 269 N 269
Sbjct: 323 R 323
>gi|6714528|dbj|BAA89478.1| polygalacturonase [Salix gilgiana]
Length = 393
Score = 210 bits (535), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 131/377 (34%), Positives = 188/377 (49%), Gaps = 89/377 (23%)
Query: 23 TNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCK 82
+N VL+V + DG D ++A + +W++A VL+P G Y + GPCK
Sbjct: 27 SNGVLDVTKY----DGKEDITEALNNAWKDACASTN-PSKVLIPSGTYSLRQVTLAGPCK 81
Query: 83 ASISFQLQGLL---------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSD 127
A+I Q+ G+L D +D GTF GQG AW + C+K+ +
Sbjct: 82 AAIELQVDGILKAPVNPDQFSGGSWVDFRHVDQLTLSGSGTFDGQGNVAWSKSTCNKDKN 141
Query: 128 CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH----------- 175
C+ LP IRF+F+ + + I + DS+ FH+N+LGC NL +TA
Sbjct: 142 CEGLPMNIRFDFITNGLVRDITTRDSKNFHVNVLGCKNLTFQHFTMTAPGESINTDGIHI 201
Query: 176 ----------------------ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLT 213
D ++++ V+ V CGPG GISVGSLG+ ++ V G+
Sbjct: 202 GQSTGIYIIDSNIGTGDDCISVGDGTEELHVTGVTCGPGHGISVGSLGRYPNEKPVSGIF 261
Query: 214 VRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC----- 268
V+NCT + T+NGVR+K+WPD + G ASN FEDIVMNNV+NP+V+DQ YCP+N+C
Sbjct: 262 VKNCTISNTANGVRIKSWPDLYGGAASNMHFEDIVMNNVQNPVVVDQEYCPWNQCSLKSP 321
Query: 269 -----------NIKPKDSMP--------------NIEIGNRNLVYNGVNVKVEGPETTSL 303
NI+ + P +E+ + NLVY+G EGP S
Sbjct: 322 SKVKISDVSFKNIRGTSATPVVVKLACSGGIPCEKVELADINLVYSG----SEGP-AKSQ 376
Query: 304 CSNVKPTLFGKQIPATC 320
CSNVKPT+ G + C
Sbjct: 377 CSNVKPTISGIMSASGC 393
>gi|359485871|ref|XP_003633345.1| PREDICTED: polygalacturonase-like [Vitis vinifera]
gi|296084979|emb|CBI28394.3| unnamed protein product [Vitis vinifera]
Length = 396
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 138/371 (37%), Positives = 187/371 (50%), Gaps = 79/371 (21%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
+V +GA ADG TD S+A T+W EA I V++P G Y + EGPCKA I+
Sbjct: 26 FDVTKYGAQADGKTDISQALLTAW-EAACASPIASRVVIPAGIYALGQVTIEGPCKAPIN 84
Query: 87 FQLQGLLDLFSIDTS----------------LSLAK-GTFHGQGETAWPLNQCHKNSDC- 128
++G + +DTS +L+ G F GQG++ W +C + C
Sbjct: 85 LIVKGTVRA-PVDTSRFKPQAGWVAFQHLDQFTLSGYGVFDGQGQSVW-RQKCSRTKYCH 142
Query: 129 QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---------- 178
QLP +RFNFL +S I I S DS+ FHIN+L C N+ + ITA DS
Sbjct: 143 QLPINLRFNFLTNSIIKDITSKDSKQFHINVLRCRNITFFQVAITAPEDSQNTDGIHIGR 202
Query: 179 -----------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVR 215
S+ I +++V CGPG GISVGSLG + V+G+ V+
Sbjct: 203 SRGVNITHSTIQTGDDCVSIGDGSEQIDITKVNCGPGHGISVGSLGLYKNEAPVIGIRVK 262
Query: 216 NCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK--PK 273
NCT + T+NGVRVKTWP S G A+ F DIVMNNV NPI+IDQ YCP+N+CN++ +
Sbjct: 263 NCTLSDTTNGVRVKTWPSSPQGTATEMHFHDIVMNNVSNPIIIDQEYCPHNQCNLQIPSR 322
Query: 274 DSMPNIEIGN---------------------RNLVYNGVNVKVEGPETT--SLCSNVKPT 310
+ NI N + + +++K GPE T S C NV+ T
Sbjct: 323 VKLSNISFKNIRGTTSTELAVNLVCSKGAPCQKVELGNIDLKYTGPEGTASSQCKNVEAT 382
Query: 311 LFGKQIPATCV 321
L+G Q P TC
Sbjct: 383 LWGTQQPKTCA 393
>gi|6714524|dbj|BAA89476.1| polygalacturonase [Salix gilgiana]
Length = 393
Score = 210 bits (534), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 133/377 (35%), Positives = 188/377 (49%), Gaps = 89/377 (23%)
Query: 23 TNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCK 82
+N V +V +G G D + A +W++A V +P G Y + GPCK
Sbjct: 27 SNGVFDVTKYG----GKQDITAALTNAWKDACA-STKPSKVRIPSGTYSLRQVTLAGPCK 81
Query: 83 ASISFQLQGLL------DLFS---------IDTSLSLAKGTFHGQGETAWPLNQCHKNSD 127
++I Q+ G+L D FS ID GTF GQG AW + C KN +
Sbjct: 82 SAIELQVNGILKAPVNPDQFSGGHWVNFRYIDHLTLSGSGTFDGQGNVAWSKSTCSKNKN 141
Query: 128 CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-------- 178
C+ LP IRF+F+ + + I + DS+ FH+N+LGC NL +TA A+S
Sbjct: 142 CEGLPMNIRFDFITNGLVRDITTRDSKNFHVNVLGCKNLTFQHFTVTAPAESINTDGIHI 201
Query: 179 -------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLT 213
++++ V+ V CGPG GISVGSLG+ ++ V G+
Sbjct: 202 GRSTGIYIIDSKIGTGDDCISVGDGTEELHVTRVTCGPGHGISVGSLGRYPNEKPVSGIF 261
Query: 214 VRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC----- 268
V+NCT + T+NGVR+K+WPD + G+ASN FEDIVMNNV+NPI++DQ+YCP+N+C
Sbjct: 262 VKNCTISNTANGVRIKSWPDLYGGVASNMHFEDIVMNNVQNPILLDQVYCPWNQCSLKAP 321
Query: 269 -----------NIKPKDSMP--------------NIEIGNRNLVYNGVNVKVEGPETTSL 303
NI+ + P +E+ N NLVY+G EGP S
Sbjct: 322 SKVKISDVSFKNIRGTSATPVVVKLACSSGIPCEKVELANINLVYSG----SEGP-AKSQ 376
Query: 304 CSNVKPTLFGKQIPATC 320
CSNVKP + G + C
Sbjct: 377 CSNVKPKISGIMSASGC 393
>gi|449517822|ref|XP_004165943.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 405
Score = 209 bits (533), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 138/397 (34%), Positives = 196/397 (49%), Gaps = 86/397 (21%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK 60
LL+ L+SFI R + + ++ +G + G D ++A +W +A
Sbjct: 9 LLVTTFLMSLLSFIIESR--SHVDVIFPLRKYGNIVSG-ADVTEALKDAWNDACA-SVRP 64
Query: 61 GTVLVPPGKYLVSFAEFEGPCKASISFQLQGLLDL-----------FSIDTSLSLAKG-T 108
V++P G + V EF+GPCK+ I +++G L F+ ++L+ G
Sbjct: 65 SAVVIPKGIFKVREGEFKGPCKSPIEIRVRGTLQAPKHPHGDSWITFAYVDRMTLSGGGV 124
Query: 109 FHGQGETAWPLNQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 167
F GQG+ W N CHK DC LP +RF+F+ +S + I S+DS+ FH+NILGC NL
Sbjct: 125 FDGQGKAGWEKNDCHKRIDCANLPISLRFDFITNSIVKRITSLDSKNFHVNILGCNNLTF 184
Query: 168 NDLKITAHADS---------------------------------SKDILVSEVFCGPGQG 194
+ I A DS SK + ++ V CGPG G
Sbjct: 185 KGVNIIAPEDSPNTDGIHIGRSIGISILKSQIATGDDCISLGDGSKRVKITNVTCGPGHG 244
Query: 195 ISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDS-HIGIASNFTFEDIVMNNVE 253
IS+GSLGK +E V G+ V+NCT T+NGVR+KTWP S + GIA++ F DI M NV
Sbjct: 245 ISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWPASPNAGIATDMHFSDITMVNVS 304
Query: 254 NPIVIDQLYCPYNKC----------------NIKPKDSMP--------------NIEIGN 283
NPI+IDQ YCP+N+C NI+ + P +++ N
Sbjct: 305 NPILIDQEYCPWNQCNREIPSNIKINNVSFKNIRGSSATPVAVKLICSSNQPCEEVKVAN 364
Query: 284 RNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 320
+LVYNG+N GP TS C NVKP + G Q P+ C
Sbjct: 365 IDLVYNGIN----GP-ITSQCMNVKPIVSGIQNPSIC 396
>gi|449488490|ref|XP_004158053.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Cucumis
sativus]
Length = 2882
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 140/383 (36%), Positives = 191/383 (49%), Gaps = 87/383 (22%)
Query: 16 SVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFA 75
S R A V +V FGA +G D + +W++A VL+P G Y +S +
Sbjct: 620 STRQSAAGGGVFDVTSFGAKPNG--DITGPLLVAWKDACA-STTPSKVLIPKGSYGLSQS 676
Query: 76 EFEGPCKASISFQLQG------------LLDLFSIDTSLSLAKGTFHGQGETAWPLNQCH 123
+GPCK+ I Q++G LL L ID G GQG+ W N CH
Sbjct: 677 NLKGPCKSPIELQIEGTLQASPDPKGDGLLLLEYIDQLTVSGTGVLDGQGKAGWEKNDCH 736
Query: 124 KNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH------- 175
C +LP ++ NF+ +S + I S+DS+ +HIN+LGC NL ++ + ITA
Sbjct: 737 LKKICTKLPMTLKLNFITNSIVKDITSLDSKNYHINLLGCKNLTIDHVTITAPENSPNTD 796
Query: 176 --------------------------ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEV 209
D++K I++S+V CGPG GIS+GSLGK K++EV
Sbjct: 797 GIHVSSSEQINILNTNIATGDDCISVGDTNKQIVISDVTCGPGHGISIGSLGKYSKEKEV 856
Query: 210 VGLTVRNCTFTCTSNGVRVKTWPDSHIGI--ASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
VG+TV+ C T T+NGVR+KTWPDS +G A++ FEDI M NV NPI+IDQ YCP+N+
Sbjct: 857 VGVTVKKCKLTSTTNGVRIKTWPDS-VGTFPATDMHFEDIEMVNVSNPIIIDQEYCPWNQ 915
Query: 268 CNIK-------PKDSMPNI-----------------------EIGNRNLVYNGVNVKVEG 297
CN K K S NI E+ + +L Y+G EG
Sbjct: 916 CNRKVPSKIKISKVSFKNIRGTSATAVAVKIVCSQSNPCEEVEVADIDLTYSG----SEG 971
Query: 298 PETTSLCSNVKPTLFGKQIPATC 320
P S C+NVKP + GKQ P C
Sbjct: 972 P-IKSQCANVKPVITGKQNPPIC 993
>gi|297789264|ref|XP_002862616.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
gi|297308250|gb|EFH38874.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
Length = 445
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 147/385 (38%), Positives = 185/385 (48%), Gaps = 89/385 (23%)
Query: 17 VRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAE 76
V G A L+VK GA DG TDDS AF +W+EA T+ VP G+YLV E
Sbjct: 61 VPGAKAGGASLDVKASGAKGDGKTDDSAAFAAAWKEACAAGS---TITVPKGEYLVESLE 117
Query: 77 FEGPCKASISFQLQGLL----------------DLFSI-DTSLSLAKGTFHGQGETAWPL 119
F+GPCK ++ +L G L D +I D +L+ F GQG AW
Sbjct: 118 FKGPCKGPVTLELNGNLKAPATVKTSKPHSGWIDFENIADFTLNGNGAIFDGQGSLAWKA 177
Query: 120 NQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH--- 175
N C K C LP IRF L +S I I S +S+ FH+NIL C N+ L D+ I A
Sbjct: 178 NDCAKTGKCNSLPINIRFTGLTNSKIKSITSTNSKLFHMNILNCKNITLEDIGIDAPPES 237
Query: 176 ------------------------------ADSSKDILVSEVFCGPGQGISVGSLGKGIK 205
D +++++V V CGPG GIS+GSLG+
Sbjct: 238 LNTDGIHIGRSNGVNLLGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPN 297
Query: 206 DEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPY 265
++ V G+TVR C T NGVR+KTWP S GIASN FEDI M+NV P++IDQ YCPY
Sbjct: 298 EQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSTPVLIDQEYCPY 357
Query: 266 NKC----------------NIKPKDSMP--------------NIEIGNRNLVYNGVNVKV 295
C NIK + NI + + NLV+NG
Sbjct: 358 GHCKAGVPSKVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALADINLVHNG----K 413
Query: 296 EGPETTSLCSNVKPTLFGKQIPATC 320
EGP S CSN+KP L GK +PA C
Sbjct: 414 EGP-AVSACSNIKPILSGKLVPAAC 437
>gi|147835151|emb|CAN65676.1| hypothetical protein VITISV_002011 [Vitis vinifera]
Length = 587
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 141/371 (38%), Positives = 189/371 (50%), Gaps = 79/371 (21%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
+V +GA ADG TD S+A T+W EA I V++P G Y + EGPCKA I+
Sbjct: 217 FDVTKYGAQADGKTDISQALLTAW-EAACASPIVSRVVIPAGIYALGQVTIEGPCKAPIN 275
Query: 87 FQLQGLLDLFSIDTS----------------LSLAK-GTFHGQGETAWPLNQCHKNSDC- 128
++G + +DTS +L+ G F GQG++ W +C + C
Sbjct: 276 LIVKGTVRA-PVDTSRFKPQAGWVAFQHLDQFTLSGYGVFDGQGQSVWG-QKCSRTKYCN 333
Query: 129 QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---------- 178
QLP +RFNFL +S I I S DS+ FHIN+LGC N+ + ITA DS
Sbjct: 334 QLPINLRFNFLTNSIIKDITSKDSKQFHINVLGCRNITFFQVAITAPEDSQNTDGIHIGR 393
Query: 179 -----------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVR 215
S+ I +++V CGPG GISVGSLG + V+G+ V+
Sbjct: 394 SRGVNITHSTIQTGDDCVSIGDGSEQIDITKVNCGPGHGISVGSLGLYKNEAPVIGIRVK 453
Query: 216 NCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK--PK 273
NCT + T+NGVRVKT+P S G A+ F DIVMNNV NPI+IDQ YCP+N+CN++ +
Sbjct: 454 NCTLSDTTNGVRVKTYPSSPQGTATEMHFHDIVMNNVSNPIIIDQEYCPHNQCNLQVPSR 513
Query: 274 DSMPNIEIGN----------RNLV-----------YNGVNVKVEGPETT--SLCSNVKPT 310
+ NI N NLV +++K GPE T S C NV+ T
Sbjct: 514 VKLSNISFKNIRGTTSTELAVNLVCSKGAPCQKVELGNIDLKYTGPEGTASSQCKNVEAT 573
Query: 311 LFGKQIPATCV 321
L+G Q P TC
Sbjct: 574 LWGTQQPKTCA 584
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/96 (60%), Positives = 72/96 (75%)
Query: 176 ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSH 235
D S+ I V +V CGPG GISVGSLGK +E VVG+TV+NCT T NG+RVKTWPDS
Sbjct: 45 GDGSQHINVEKVTCGPGHGISVGSLGKYHNEEPVVGVTVKNCTLINTMNGIRVKTWPDSP 104
Query: 236 IGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK 271
+A++ FEDI+MNNV NPI+I+Q YCPY++C K
Sbjct: 105 ASVATDLHFEDIIMNNVGNPILINQEYCPYDQCQAK 140
>gi|297834246|ref|XP_002885005.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
gi|297330845|gb|EFH61264.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
Length = 449
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 146/385 (37%), Positives = 185/385 (48%), Gaps = 89/385 (23%)
Query: 17 VRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAE 76
V G A L++K GA DG TDDS AF +W+EA T+ VP G+YLV E
Sbjct: 65 VPGAKAGGASLDIKASGAKGDGKTDDSAAFAAAWKEACAAGS---TITVPKGEYLVESLE 121
Query: 77 FEGPCKASISFQLQGLL----------------DLFSI-DTSLSLAKGTFHGQGETAWPL 119
F+GPCK ++ +L G L D +I D +L+ F GQG AW
Sbjct: 122 FKGPCKGPVTLELNGNLKAPATVKTSKPHSGWIDFENIADFTLNGNGAIFDGQGSLAWKA 181
Query: 120 NQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH--- 175
N C K C LP IRF L +S I I S +S+ FH+NIL C N+ L D+ I A
Sbjct: 182 NDCAKTGKCNSLPINIRFTGLTNSKIKSITSTNSKLFHMNILNCKNITLEDIGIDAPPES 241
Query: 176 ------------------------------ADSSKDILVSEVFCGPGQGISVGSLGKGIK 205
D +++++V V CGPG GIS+GSLG+
Sbjct: 242 LNTDGIHIGRSNGVNLLGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPN 301
Query: 206 DEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPY 265
++ V G+TVR C T NGVR+KTWP S GIASN FEDI M+NV P++IDQ YCPY
Sbjct: 302 EQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSTPVLIDQEYCPY 361
Query: 266 NKC----------------NIKPKDSMP--------------NIEIGNRNLVYNGVNVKV 295
C NIK + NI + + NLV+NG
Sbjct: 362 GHCKAGVPSKVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALADINLVHNG----K 417
Query: 296 EGPETTSLCSNVKPTLFGKQIPATC 320
EGP S CSN+KP L GK +PA C
Sbjct: 418 EGP-AVSACSNIKPILSGKLVPAAC 441
>gi|224102769|ref|XP_002312795.1| predicted protein [Populus trichocarpa]
gi|222849203|gb|EEE86750.1| predicted protein [Populus trichocarpa]
Length = 410
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 134/370 (36%), Positives = 192/370 (51%), Gaps = 75/370 (20%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCK--A 83
+ +VK FGA ADG TDDSKAF +W+EA G K +L+P G YL+ +F GPCK +
Sbjct: 42 LFDVKRFGARADGRTDDSKAFIAAWKEACRATG-KVELLIPKGTYLIGPVKFAGPCKNVS 100
Query: 84 SISFQLQGLLDL-----------FSIDTSLSL-AKGTFHGQGETAWPLNQCHKNSDCQL- 130
S++ L+ L F L+L GTF GQG AWP N C +S C+L
Sbjct: 101 SLTGYLKATAKLSRYGSGTGWVEFGWLERLTLTGGGTFDGQGAKAWPYNNCTNDSKCKLL 160
Query: 131 PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------ 178
PT ++F +N + + GI S++S++FHI ++ C N K +KI+A ADS
Sbjct: 161 PTNVKFVAMNQTVVQGITSLNSKFFHIALVECKNFKGTKIKISAPADSPNTDGIHVERSS 220
Query: 179 ---------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNC 217
+ + ++ + CGPG GISVGSLG+ + +V GL VR+C
Sbjct: 221 SVYISQSLIGTGDDCISIGQGNSQVTITRIRCGPGHGISVGSLGRYEDEGDVSGLVVRDC 280
Query: 218 TFTCTSNGVRVKTWPDS-HIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC-NIKP-KD 274
+ T NG+R+KTW +S A+N TFE+IVMNNV NPI+IDQ YCP++ C + +P K
Sbjct: 281 AISGTMNGIRIKTWANSPGSSAATNMTFENIVMNNVTNPIIIDQSYCPFSSCISTEPSKV 340
Query: 275 SMPNIE---------------------IGNRNLVYNGVNVKVEGPE--TTSLCSNVKPTL 311
+ +I I +N+ V++++ E TS C NV+
Sbjct: 341 KLSDIYFKQIRGTSSSAVAVALECSKGIPCQNIYLENVHLELSSGEKQATSSCKNVRARY 400
Query: 312 FGKQIPATCV 321
G+QIP C
Sbjct: 401 IGEQIPPPCA 410
>gi|449449709|ref|XP_004142607.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 341
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/293 (39%), Positives = 162/293 (55%), Gaps = 50/293 (17%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
V ++ +GA + D + A ++W+EA VL+P G Y +S + +GPCK+ I
Sbjct: 44 VFDITKYGAKPNA--DITAALTSAWKEAC-ASTTPSKVLIPKGSYGLSQSNLKGPCKSPI 100
Query: 86 SFQLQG------------LLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDC-QLPT 132
Q++G LL L + D G GQG+ W N CH +C +LP
Sbjct: 101 ELQIEGTLQAPAHPEGEGLLILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPM 160
Query: 133 PIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH----------------- 175
++ NF+ +S +TGI S+DS+ FHIN+LGC NL + + ITA
Sbjct: 161 NLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQI 220
Query: 176 ----------------ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTF 219
DS+K + +S+V CGPG GIS+GSLGK K++EVVG+TV+ C
Sbjct: 221 NILNTNIATGDDCISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKL 280
Query: 220 TCTSNGVRVKTWPDSHIGI-ASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK 271
T T+NGVR+KTWPDS + A++ FEDI M+NV NPI+IDQ YCP+N+CN K
Sbjct: 281 TGTTNGVRIKTWPDSAVAFPATDMHFEDIEMDNVSNPIIIDQEYCPWNQCNRK 333
>gi|449473146|ref|XP_004153799.1| PREDICTED: polygalacturonase-like, partial [Cucumis sativus]
Length = 333
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/293 (39%), Positives = 162/293 (55%), Gaps = 50/293 (17%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
V ++ +GA + D + A ++W+EA VL+P G Y +S + +GPCK+ I
Sbjct: 44 VFDITKYGAKPNA--DITAALTSAWKEAC-ASTTPSKVLIPKGSYGLSQSNLKGPCKSPI 100
Query: 86 SFQLQG------------LLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDC-QLPT 132
Q++G LL L + D G GQG+ W N CH +C +LP
Sbjct: 101 ELQIEGTLQAPAHPEGEGLLILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPM 160
Query: 133 PIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH----------------- 175
++ NF+ +S +TGI S+DS+ FHIN+LGC NL + + ITA
Sbjct: 161 NLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQI 220
Query: 176 ----------------ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTF 219
DS+K + +S+V CGPG GIS+GSLGK K++EVVG+TV+ C
Sbjct: 221 NILNTNIATGDDCISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKL 280
Query: 220 TCTSNGVRVKTWPDSHIGI-ASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK 271
T T+NGVR+KTWPDS + A++ FEDI M+NV NPI+IDQ YCP+N+CN K
Sbjct: 281 TGTTNGVRIKTWPDSAVAFPATDMHFEDIEMDNVSNPIIIDQEYCPWNQCNRK 333
>gi|449476536|ref|XP_004154764.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 406
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 141/399 (35%), Positives = 194/399 (48%), Gaps = 89/399 (22%)
Query: 1 LLLAARFSLLVSF-ITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGI 59
LL+ L+SF I S +D + ++ +G + G D ++A +W +A
Sbjct: 9 LLITTFLMSLLSFTIESQSHVDV---IFPLRKYGNIVSG-DDVTEALKDAWNDACA-SVR 63
Query: 60 KGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLLD------------LFSIDTSLSLAKG 107
V++P G + + EF+GPCK+ I +++G L +D KG
Sbjct: 64 PSAVVIPDGIFKLREGEFKGPCKSPIEIRVRGTLQAPKHPHGDSWITFAYVDRMTISGKG 123
Query: 108 TFHGQGETAWPLNQCHKNSDC-QLPTPI-RFNFLNDSTITGIKSVDSRYFHINILGCYNL 165
F GQG+ W N CHK DC LP I RF+F+ +S + GI S+DS+ FH+NILGC NL
Sbjct: 124 VFDGQGKAGWEKNDCHKRIDCVNLPIVILRFDFITNSIVRGITSLDSKNFHVNILGCNNL 183
Query: 166 KLNDLKITAHADS---------------------------------SKDILVSEVFCGPG 192
+ I A DS SK + ++ V CGPG
Sbjct: 184 TFQGVNIIAPEDSPNTDGIHIGRSIGISILKSRIATGDDCISLGDGSKRVKITNVTCGPG 243
Query: 193 QGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHI-GIASNFTFEDIVMNN 251
GIS+GSLGK +E V + V+NCT T+NGVR+KTWP S + GIA+N F DI M N
Sbjct: 244 HGISIGSLGKYTNEEPVDDVVVKNCTIMNTTNGVRIKTWPSSPVAGIATNMHFSDITMIN 303
Query: 252 VENPIVIDQLYCPYNKC----------------NIKPKDSMP--------------NIEI 281
V NPI+IDQ YCP+N+C NIK + P +++
Sbjct: 304 VSNPILIDQEYCPWNQCNREIPSNIKINNVSFKNIKGSSATPVAVKLICSSNQPCEEVKV 363
Query: 282 GNRNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 320
N +LVYNG+N GP TS C NVKP + G Q P+ C
Sbjct: 364 ANIDLVYNGIN----GP-VTSQCMNVKPIISGIQNPSIC 397
>gi|311962|emb|CAA51692.1| exopolygalacturonase [Arabidopsis thaliana]
Length = 445
Score = 207 bits (526), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 145/385 (37%), Positives = 185/385 (48%), Gaps = 89/385 (23%)
Query: 17 VRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAE 76
V G L+VK GA DG TDDS AF +W+EA T+ VP G+YLV E
Sbjct: 61 VTGAKPGGASLDVKASGAKGDGKTDDSAAFAAAWKEACAAGS---TITVPKGEYLVESLE 117
Query: 77 FEGPCKASISFQLQG----------------LLDLFSI-DTSLSLAKGTFHGQGETAWPL 119
F+GPCK ++ +L G +D ++ D +L+ K F GQG AW
Sbjct: 118 FKGPCKGPVTLELNGNFKAPATVKTTKPHAGWIDFENLADFTLNGNKAIFDGQGSLAWKA 177
Query: 120 NQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH--- 175
N C K C LP IRF L +S I I S +S+ FH+NIL C N+ L D+ I A
Sbjct: 178 NDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLTDISIDAPPES 237
Query: 176 ------------------------------ADSSKDILVSEVFCGPGQGISVGSLGKGIK 205
D +++++V V CGPG GIS+GSLG+
Sbjct: 238 LNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPN 297
Query: 206 DEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPY 265
++ V G+TVR C T NGVR+KTWP S GIASN FEDI M+NV P++IDQ YCPY
Sbjct: 298 EQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPY 357
Query: 266 NKC----------------NIKPKDSMP--------------NIEIGNRNLVYNGVNVKV 295
C NIK + NI + + NLV+NG
Sbjct: 358 GHCKAGVPSKVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNG----K 413
Query: 296 EGPETTSLCSNVKPTLFGKQIPATC 320
EGP S CSN+KP L GK +PA C
Sbjct: 414 EGP-AVSACSNIKPILSGKLVPAAC 437
>gi|359474790|ref|XP_002279959.2| PREDICTED: exopolygalacturonase-like [Vitis vinifera]
Length = 424
Score = 206 bits (525), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 136/380 (35%), Positives = 194/380 (51%), Gaps = 83/380 (21%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPC 81
A + NV+ FGA ADG TDD +AF +W+EA G K +L+P G Y++ F GPC
Sbjct: 48 ANTHLFNVRSFGAQADGHTDDRRAFTAAWKEACASTG-KVKLLIPKGTYMIGPITFAGPC 106
Query: 82 KA--SISFQLQGLL----DL-----------FSIDTSLSL-AKGTFHGQGETAWPLNQCH 123
+ S++ ++G L DL F L+L GTF GQG AWP N+C
Sbjct: 107 NSVSSLTVVMKGYLKATTDLSEYGFSAGWIEFGWMKGLTLTGGGTFDGQGVEAWPYNKCP 166
Query: 124 KNSDCQL-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---- 178
N++C+L PT ++F +N + + GI SV+S++FHI ++ C N K + +KI+A +S
Sbjct: 167 INANCKLLPTNLKFIAMNKTVVRGITSVNSKFFHIALVECNNFKGSQIKISAPENSPNTD 226
Query: 179 -----------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEV 209
+ + ++ + CGPG GISVGSLGK +E+V
Sbjct: 227 GIHIERSSGVYFSRSLIGTGDDCISVGQGNSQVTITSITCGPGHGISVGSLGKYPNEEDV 286
Query: 210 VGLTVRNCTFTCTSNGVRVKTW---PDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYN 266
GL V++CT T T+NG+R+KTW PDS A+N TFE+IVMNNV NPI+IDQ YCP+
Sbjct: 287 SGLVVKDCTMTGTTNGIRIKTWANSPDSS--EATNMTFENIVMNNVTNPIIIDQAYCPFM 344
Query: 267 KCNIKP--KDSMPNIEIGN---------------------RNLVYNGVNVKVEGPE--TT 301
C K + + +I N +N+ V++ + E T
Sbjct: 345 SCASKAPSRVKLSDIYFKNIRGTSLSAVAVTLKCSRGTPCQNIYLQDVHLDLSSGEKHAT 404
Query: 302 SLCSNVKPTLFGKQIPATCV 321
S C NV+ G QIP C
Sbjct: 405 SSCRNVRVKYSGTQIPPPCA 424
>gi|449520515|ref|XP_004167279.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
Length = 404
Score = 206 bits (525), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 138/398 (34%), Positives = 196/398 (49%), Gaps = 88/398 (22%)
Query: 1 LLLAARFSLLVSF-ITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGI 59
LL+ L+SF I S ID + ++ +G + G D ++A +W +A
Sbjct: 9 LLVTTFLMSLLSFTIESRSHIDV---IFPLEKYGNIVSG-ADVTEALKNAWNDACA-SVH 63
Query: 60 KGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLLDL-----------FSIDTSLSLAKG- 107
V++P G + V +F+GPCK+ I +++G L F+ ++L+ G
Sbjct: 64 PSAVVIPKGIFKVREGKFKGPCKSPIEIRVRGTLQAPKHPYGDSWITFAYVDRMTLSGGG 123
Query: 108 TFHGQGETAWPLNQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLK 166
F GQG+T W N CHK DC LP +RF+F+ +S + I S++S+ FH+NILGC NL
Sbjct: 124 VFDGQGKTGWEKNDCHKRIDCANLPISLRFDFITNSIVRRITSLNSKNFHVNILGCNNLT 183
Query: 167 LNDLKITAHADS---------------------------------SKDILVSEVFCGPGQ 193
+ I A DS SK + V+ V CGPG
Sbjct: 184 FQGVNIIAPEDSPNTDGIHIGRSIGISILKSRIATGDDCISLGDGSKQVKVANVTCGPGH 243
Query: 194 GISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDS-HIGIASNFTFEDIVMNNV 252
GIS+GSLGK +E V G+ V+NCT T+NGVR+KTWP S GIA+N F DI M NV
Sbjct: 244 GISIGSLGKYTNEEPVEGVIVKNCTIINTTNGVRIKTWPTSPAAGIATNMHFSDITMVNV 303
Query: 253 ENPIVIDQLYCPYNKC----------------NIKPKDSMP--------------NIEIG 282
NPI+IDQ YCP+N+C NI+ + P +++
Sbjct: 304 SNPILIDQEYCPWNQCNREIPSNIKINKVSFENIRGSSATPVAVKLICSSNLPCDEVKVA 363
Query: 283 NRNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 320
N +L+YNG+N + TS C NVKP + G Q P+ C
Sbjct: 364 NIDLIYNGINGSI-----TSQCMNVKPIISGIQNPSIC 396
>gi|3004442|emb|CAA11160.1| polygalacturonase [Arabidopsis thaliana]
Length = 445
Score = 206 bits (525), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 145/385 (37%), Positives = 185/385 (48%), Gaps = 89/385 (23%)
Query: 17 VRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAE 76
V G L+VK GA DG TDDS AF +W+EA T+ VP G+YLV E
Sbjct: 61 VTGAKPGGASLDVKASGAKGDGKTDDSAAFAAAWKEACAAGS---TITVPKGEYLVESLE 117
Query: 77 FEGPCKASISFQLQG----------------LLDLFSI-DTSLSLAKGTFHGQGETAWPL 119
F+GPCK ++ +L G +D ++ D +L+ K F GQG AW
Sbjct: 118 FKGPCKGPVTLELNGNFKAPATVKTTKPHAGWIDFENLADFTLNGNKAIFDGQGSLAWKA 177
Query: 120 NQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH--- 175
N C K C LP IRF L +S I I S +S+ FH+NIL C N+ L D+ I A
Sbjct: 178 NDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPES 237
Query: 176 ------------------------------ADSSKDILVSEVFCGPGQGISVGSLGKGIK 205
D +++++V V CGPG GIS+GSLG+
Sbjct: 238 LNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPN 297
Query: 206 DEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPY 265
++ V G+TVR C T NGVR+KTWP S GIASN FEDI M+NV P++IDQ YCPY
Sbjct: 298 EQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPY 357
Query: 266 NKC----------------NIKPKDSMP--------------NIEIGNRNLVYNGVNVKV 295
C NIK + NI + + NLV+NG
Sbjct: 358 GHCKAGVPSKVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNG----K 413
Query: 296 EGPETTSLCSNVKPTLFGKQIPATC 320
EGP S CSN+KP L GK +PA C
Sbjct: 414 EGP-AVSACSNIKPILSGKLVPAAC 437
>gi|17064742|gb|AAL32525.1| polygalacturonase; pectinase [Arabidopsis thaliana]
gi|21387101|gb|AAM47954.1| polygalacturonase; pectinase [Arabidopsis thaliana]
Length = 445
Score = 206 bits (525), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 144/385 (37%), Positives = 184/385 (47%), Gaps = 89/385 (23%)
Query: 17 VRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAE 76
V G L+VK GA DG TDDS AF + +EA T+ VP G+YLV E
Sbjct: 61 VTGAKPGGASLDVKASGAKGDGKTDDSAAFAAARKEACAAGS---TITVPKGEYLVESLE 117
Query: 77 FEGPCKASISFQLQG----------------LLDLFSI-DTSLSLAKGTFHGQGETAWPL 119
F+GPCK ++ +L G +D ++ D +L+ K F GQG AW
Sbjct: 118 FKGPCKGPVTLELNGNFKAPATVKTTKPHAGWIDFENLADFTLNGNKAIFDGQGSLAWKA 177
Query: 120 NQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH--- 175
N C K C LP IRF L +S I I S +S+ FH+NIL C N+ L D+ I A
Sbjct: 178 NDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPES 237
Query: 176 ------------------------------ADSSKDILVSEVFCGPGQGISVGSLGKGIK 205
D +++++V V CGPG GIS+GSLG+
Sbjct: 238 LNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPN 297
Query: 206 DEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPY 265
++ V G+TVR C T NGVR+KTWP S GIASN FEDI M+NV P++IDQ YCPY
Sbjct: 298 EQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPY 357
Query: 266 NKC----------------NIKPKDSMP--------------NIEIGNRNLVYNGVNVKV 295
C NIK + NI + + NLV+NG
Sbjct: 358 GHCKAGVPSKVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNG----K 413
Query: 296 EGPETTSLCSNVKPTLFGKQIPATC 320
EGP S CSN+KP L GK +PA C
Sbjct: 414 EGP-AVSACSNIKPILSGKLVPAAC 437
>gi|15231771|ref|NP_188020.1| exopolygalacturonase / galacturan 1,4-alpha-galacturonidase /
pectinase [Arabidopsis thaliana]
gi|11994377|dbj|BAB02336.1| polygalacturonase; pectinase [Arabidopsis thaliana]
gi|332641937|gb|AEE75458.1| exopolygalacturonase / galacturan 1,4-alpha-galacturonidase /
pectinase [Arabidopsis thaliana]
Length = 445
Score = 206 bits (525), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 145/385 (37%), Positives = 185/385 (48%), Gaps = 89/385 (23%)
Query: 17 VRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAE 76
V G L+VK GA DG TDDS AF +W+EA T+ VP G+YLV E
Sbjct: 61 VTGAKPGGASLDVKASGAKGDGKTDDSAAFAAAWKEACAAGS---TITVPKGEYLVESLE 117
Query: 77 FEGPCKASISFQLQG----------------LLDLFSI-DTSLSLAKGTFHGQGETAWPL 119
F+GPCK ++ +L G +D ++ D +L+ K F GQG AW
Sbjct: 118 FKGPCKGPVTLELNGNFKAPATVKTTKPHAGWIDFENLADFTLNGNKAIFDGQGSLAWKA 177
Query: 120 NQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH--- 175
N C K C LP IRF L +S I I S +S+ FH+NIL C N+ L D+ I A
Sbjct: 178 NDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPES 237
Query: 176 ------------------------------ADSSKDILVSEVFCGPGQGISVGSLGKGIK 205
D +++++V V CGPG GIS+GSLG+
Sbjct: 238 LNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPN 297
Query: 206 DEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPY 265
++ V G+TVR C T NGVR+KTWP S GIASN FEDI M+NV P++IDQ YCPY
Sbjct: 298 EQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPY 357
Query: 266 NKC----------------NIKPKDSMP--------------NIEIGNRNLVYNGVNVKV 295
C NIK + NI + + NLV+NG
Sbjct: 358 GHCKAGVPSKVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNG----K 413
Query: 296 EGPETTSLCSNVKPTLFGKQIPATC 320
EGP S CSN+KP L GK +PA C
Sbjct: 414 EGP-AVSACSNIKPILSGKLVPAAC 437
>gi|449445367|ref|XP_004140444.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
gi|449487925|ref|XP_004157869.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
Length = 401
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 136/373 (36%), Positives = 183/373 (49%), Gaps = 85/373 (22%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
V +V +GA + TD + A +W+ A + VL+P G YL+S + +GPCK+SI
Sbjct: 26 VFDVTRYGAKPN--TDITHALLNAWKGACASTS-RSKVLIPKGIYLLSQSNLKGPCKSSI 82
Query: 86 SFQLQGLLD------------LFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDC-QLPT 132
Q+QG L L ID G F GQG+ W N CHK C +LP
Sbjct: 83 EIQVQGTLQAPPDPKGDGLVILEYIDQLTLSGTGVFDGQGKAGWEKNDCHKKKICTKLPM 142
Query: 133 PIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH----------------- 175
++FNF+ +S + I S+DS+ FHIN+LGC N+ + I+A
Sbjct: 143 TLKFNFVTNSIVKDITSLDSKNFHINLLGCKNITFEHVTISAPENSPNTDGIHISSSEQI 202
Query: 176 ----------------ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTF 219
DS+KDI + +V CGPG GIS+GSLGK K++ V G+ V C
Sbjct: 203 RILNTKISTGDDCVSVGDSNKDITIRDVTCGPGHGISIGSLGKYTKEKAVEGVWVTKCKL 262
Query: 220 TCTSNGVRVKTWPDSHIGI-ASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK------- 271
T+NGVR+KTWPDS + AS+ FEDI M +V NPI+IDQ YCP+N+CN K
Sbjct: 263 IKTTNGVRIKTWPDSAVKYSASDMHFEDIEMIDVSNPILIDQEYCPWNQCNRKIPSSIKI 322
Query: 272 PKDSMPNI-----------------------EIGNRNLVYNGVNVKVEGPETTSLCSNVK 308
K S NI E+ + +L YNG + TS C+NVK
Sbjct: 323 SKVSFKNIRGTTVTPVAVKLVCSKSIPCEAVEVADIDLKYNGNKGSI-----TSQCANVK 377
Query: 309 PTLFGKQIPATCV 321
P + GKQ P C
Sbjct: 378 PIISGKQNPRICA 390
>gi|34223515|gb|AAQ63000.1| oil palm polygalacturonase allergen PEST643 [Elaeis guineensis]
Length = 433
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 121/310 (39%), Positives = 166/310 (53%), Gaps = 56/310 (18%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
NVK FGA ADG +DDS AF +W A +G K +++P G+YLV+ FEGPC +
Sbjct: 61 AFNVKKFGAAADGKSDDSAAFLKAWETACPLEGRK-KIVIPRGEYLVNPIRFEGPCNGLM 119
Query: 86 SFQLQGL------LDLFS------------IDTSLSLAKGTFHGQGETAWPLNQCHKNSD 127
L G+ +++F+ ID L GTF GQG AW N C K D
Sbjct: 120 EVLLSGVVKAQPDINVFNQQGHKEWITFNHIDRLLITGAGTFDGQGSYAWQHNTCSKKKD 179
Query: 128 CQL-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-------- 178
C L P +R NF+ +T+ GI VDS+ F + I G N++++ +KI A ++
Sbjct: 180 CSLLPGNLRLNFVARATVRGISVVDSKSFQMTIFGSNNVRIHRIKIIAPEEAPNTDGIHI 239
Query: 179 -------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLT 213
S+ ILVS V CGPG GIS+GSLG+ + +V G+T
Sbjct: 240 GNSTNVRITDSEIGTGDDCISVGPGSRQILVSGVSCGPGHGISIGSLGRYHNEPDVSGVT 299
Query: 214 VRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPK 273
V+NCT T T+NG+RVKTW +S AS+F FE++VMN V+NPI++DQ YCP C K
Sbjct: 300 VKNCTLTGTTNGLRVKTWQNSESSRASDFHFENVVMNGVQNPIIVDQEYCPVGNCE---K 356
Query: 274 DSMPNIEIGN 283
+ +EI N
Sbjct: 357 GAPSLVEISN 366
>gi|224096864|ref|XP_002310765.1| predicted protein [Populus trichocarpa]
gi|222853668|gb|EEE91215.1| predicted protein [Populus trichocarpa]
Length = 391
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 141/398 (35%), Positives = 190/398 (47%), Gaps = 93/398 (23%)
Query: 3 LAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGT 62
++A F LL F+TS + A N V +V +G D SKAF ++W +A
Sbjct: 7 VSAIFLLL--FLTSTD-VKAENVVFDVTKYGDEED----ISKAFKSAWEDACASTS-PSK 58
Query: 63 VLVPPGKYLVSFAEFEGPCKASISFQLQGLLD----------------LFSIDTSLSLAK 106
VL+P G YL+ GPCKA+I Q++G L L +D
Sbjct: 59 VLIPRGTYLLGPVIISGPCKAAIELQVKGKLQAPVDMREFEGFSSWITLNYVDQFTLTGG 118
Query: 107 GTFHGQGETAWPLNQCHKNSDCQLP-TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNL 165
GTF GQG++A N C K+ C+LP ++FNF+ + + I S DS+YFH ++LGC NL
Sbjct: 119 GTFDGQGKSASNQNNCGKDKHCKLPPVSLKFNFITNGIVHDITSTDSKYFHAHLLGCKNL 178
Query: 166 KLNDLKITAHADS---------------------------------SKDILVSEVFCGPG 192
ITAH +S S+ I + V C PG
Sbjct: 179 TFQHFTITAHDESLNTDGIHIGRSKDIKIIDSDIGTGDDCISLGHGSRQITIEGVTCAPG 238
Query: 193 QGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNV 252
GIS+GSLGK +E V G+ V+NCT + T NGVR+K+WP G AS+ FEDI+M NV
Sbjct: 239 HGISIGSLGKSQNEESVSGIFVKNCTISNTQNGVRIKSWPALFGGSASDIHFEDIIMKNV 298
Query: 253 ENPIVIDQLYCPYNKCNIKP--KDSMPNI----------------------------EIG 282
NPIVIDQ+YCP+N+CN K K S+ N+ E+
Sbjct: 299 SNPIVIDQVYCPWNECNRKSASKVSIKNVSFKNIRGTSRTPVAVQLSCSKDIPCDEVEVA 358
Query: 283 NRNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 320
+ +L Y G EGP CSNV+P GK P+ C
Sbjct: 359 DIDLKYTGS----EGPAKFQ-CSNVQPKFHGKINPSKC 391
>gi|225447627|ref|XP_002274096.1| PREDICTED: polygalacturonase [Vitis vinifera]
gi|296084974|emb|CBI28389.3| unnamed protein product [Vitis vinifera]
Length = 393
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 133/367 (36%), Positives = 178/367 (48%), Gaps = 76/367 (20%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
+V GA ADG +D S+A +W+EA +VLVP G Y + FEGPCKA I+
Sbjct: 28 FDVTKHGAKADG-SDISQALLAAWKEAC-ASPTPSSVLVPAGTYGLGQICFEGPCKAPIN 85
Query: 87 FQLQGLLD----------------LFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDC-Q 129
++G L +ID KG F GQG W +C ++S C
Sbjct: 86 LIVEGTLKAPVDTKNFKADAGWVAFQNIDHFTLSGKGVFDGQGPAVWG-KKCARSSYCGA 144
Query: 130 LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH-------------- 175
LP ++FNFL +S + + + DS+ FH+N+LGC NL ++A
Sbjct: 145 LPINLKFNFLTNSMVRDVTTKDSKQFHVNVLGCKNLSFYHFTVSAPEESLNTDGIHIGRS 204
Query: 176 -------------------ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRN 216
D S+ I + +V CGPG GISVGSLGK + VVG+ V
Sbjct: 205 SGINITNTNIKTGDDCISIGDGSEQITIDQVTCGPGHGISVGSLGKYANEAPVVGIKVTG 264
Query: 217 CTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC--NIKPKD 274
T T T NG+RVKTWP S GIASN FEDI+MNNV NPI+IDQ YCPY++C I +
Sbjct: 265 STLTNTQNGIRVKTWPASPAGIASNMHFEDIIMNNVGNPILIDQEYCPYSQCKQQIPSRV 324
Query: 275 SMPNIEIGN---------------------RNLVYNGVNVKVEGPETTSLCSNVKPTLFG 313
+ ++ N +N+ +N+K G TS+C NVKP L G
Sbjct: 325 KISDVTFKNIRGTSSTELAVKLVCSSGVPCQNVQLTDINLKFNGGAPTSICKNVKPILGG 384
Query: 314 KQIPATC 320
Q P +C
Sbjct: 385 VQQPRSC 391
>gi|109693361|gb|ABG38467.1| pollen-expressed protein MF6t [Brassica juncea]
Length = 397
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 138/398 (34%), Positives = 190/398 (47%), Gaps = 91/398 (22%)
Query: 3 LAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGT 62
+ F + V F+ + G+ A N KDF A +D + ++ EA + + +
Sbjct: 1 MGVHFGISVLFVVCLLGLSA-----NAKDFTITAPPGSDITSLLLKTFNEACQFP-TRSS 54
Query: 63 VLVPPGKYLVSFAEFEGPCKASISFQLQGLLDL------------FSIDTSLSL-AKGTF 109
VL+P G+Y + E GPCKA I LQG + F L G F
Sbjct: 55 VLIPKGEYKLRQIEMMGPCKAPIRITLQGTVKADGNVNGNDYWVAFRRINGFKLNGGGIF 114
Query: 110 HGQGETAWPLNQCHKNSDCQ---LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLK 166
G+G AW N CHK + Q LP IRF+F+ D+ I GI S+DS+ FHIN+LG N+
Sbjct: 115 DGEGNAAWRANNCHKMALTQCKKLPISIRFDFVTDAKIRGITSLDSKNFHINVLGARNMT 174
Query: 167 LNDLKITAH---------------------------------ADSSKDILVSEVFCGPGQ 193
L ++ I A D ++D+LV V CGPG
Sbjct: 175 LEEITIIAPEESPNTDGIHVGRSVGVQIINSNIKTGDDCISIGDGTRDLLVERVTCGPGH 234
Query: 194 GISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIG-IASNFTFEDIVMNNV 252
GIS+GSLG +K+E+V G+ V N T T NGVR+KTWP + AS FE+I++ NV
Sbjct: 235 GISIGSLGLYVKEEDVTGIRVVNSTLINTDNGVRIKTWPSAACSTTASGIHFENIILKNV 294
Query: 253 ENPIVIDQLYCPYNKCNI-KP-------------------KDSM----------PNIEIG 282
NPI+IDQ YCP+N+CN KP KD++ N++IG
Sbjct: 295 TNPILIDQEYCPWNRCNKNKPSTIKLVDISFKHIRGTSGNKDAVKLLCSKGFPCKNVQIG 354
Query: 283 NRNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 320
+ ++ Y G +GP T CSNV PTL G Q+P C
Sbjct: 355 DIDIKYTG----ADGPATFQ-CSNVSPTLMGTQVPKAC 387
>gi|449506887|ref|XP_004162875.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Cucumis
sativus]
Length = 397
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 133/375 (35%), Positives = 187/375 (49%), Gaps = 88/375 (23%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
+ +V +GA + TD ++A +W+EA +L+P G Y +S + +GPCK S+
Sbjct: 21 LFDVTRYGAKPN--TDITQALANAWKEAC-MSTTPSKLLIPKGVYQLSQSYLKGPCK-SV 76
Query: 86 SFQLQ--------------GLLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDC-QL 130
Q+Q GL+ ID + G F GQG+ W N CHK C +L
Sbjct: 77 PIQVQVDGTLKAPLHPNGDGLVLFAYIDQLMLSGTGVFDGQGKAGWDKNDCHKKKICTKL 136
Query: 131 PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH--------------- 175
P ++F+F+ +S + I S+DS+ FHIN+LGC N+ + I+A
Sbjct: 137 PMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSE 196
Query: 176 ------------------ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNC 217
DS+K + ++ V CGPG GISVGSLGK K+++VVG+TV+ C
Sbjct: 197 QINILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKEKDVVGVTVKTC 256
Query: 218 TFTCTSNGVRVKTWPDSHIG-IASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK----- 271
T+NGVR+KTWPDS IAS+ FEDI M NV NP++IDQ YCP+N+CN K
Sbjct: 257 KLINTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQEYCPWNQCNRKVPSKI 316
Query: 272 --PKDSMPNI-----------------------EIGNRNLVYNGVNVKVEGPETTSLCSN 306
K S NI E+ + NL Y+G + GP S C+N
Sbjct: 317 KISKVSFKNIRGTSATPIAVKLVCSKSIPCEGVEVADINLTYSG----IRGP-ILSECAN 371
Query: 307 VKPTLFGKQIPATCV 321
V+P + GKQ P C
Sbjct: 372 VQPLITGKQSPQICA 386
>gi|449470744|ref|XP_004153076.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
gi|449531311|ref|XP_004172630.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 397
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 133/375 (35%), Positives = 187/375 (49%), Gaps = 88/375 (23%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
+ +V +GA + TD ++A +W+EA +L+P G Y +S + +GPCK S+
Sbjct: 21 LFDVTRYGAKPN--TDITQALANAWKEAC-MSTTPSKLLIPKGVYQLSQSYLKGPCK-SV 76
Query: 86 SFQLQ--------------GLLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDC-QL 130
Q+Q GL+ ID + G F GQG+ W N CHK C +L
Sbjct: 77 PIQVQVDGTLKAPLHPNGDGLVLFAYIDQLMLSGTGVFDGQGKAGWDKNDCHKKKICTKL 136
Query: 131 PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH--------------- 175
P ++F+F+ +S + I S+DS+ FHIN+LGC N+ + I+A
Sbjct: 137 PMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSE 196
Query: 176 ------------------ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNC 217
DS+K + ++ V CGPG GISVGSLGK K+++VVG+TV+ C
Sbjct: 197 QINILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKEKDVVGVTVKAC 256
Query: 218 TFTCTSNGVRVKTWPDSHIG-IASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK----- 271
T+NGVR+KTWPDS IAS+ FEDI M NV NP++IDQ YCP+N+CN K
Sbjct: 257 KLINTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQEYCPWNQCNRKVPSKI 316
Query: 272 --PKDSMPNI-----------------------EIGNRNLVYNGVNVKVEGPETTSLCSN 306
K S NI E+ + NL Y+G + GP S C+N
Sbjct: 317 KISKVSFKNIRGTSATPIAVKLVCSKSIPCEGVEVADINLTYSG----IRGP-ILSECAN 371
Query: 307 VKPTLFGKQIPATCV 321
V+P + GKQ P C
Sbjct: 372 VQPLITGKQSPQICA 386
>gi|313684|emb|CAA51033.1| exopolygalacturonase [Arabidopsis thaliana]
Length = 444
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 142/376 (37%), Positives = 185/376 (49%), Gaps = 89/376 (23%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
++VK GA DG TDDS AF +W+EA T+ VP G+Y+V EF+GPCK +
Sbjct: 69 AVDVKASGAKGDGKTDDSAAFAAAWKEACAAGS---TITVPKGEYMVESLEFKGPCKGPV 125
Query: 86 SFQLQG----------------LLDLFSI-DTSLSLAKGTFHGQGETAWPLNQCHKNSDC 128
+ +L G +D +I D +L+ K F GQG AW N C K C
Sbjct: 126 TLELNGNFKAPATVKTTKPHAGWIDFENIADFTLNGNKAIFDGQGSLAWKANDCAKTGKC 185
Query: 129 -QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH------------ 175
LP IRF L +S I I S +S+ FH+NIL C N+ L+D+ I A
Sbjct: 186 NSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIG 245
Query: 176 ---------------------ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTV 214
D +++++V V CGPG GIS+GSLG+ ++ V G+TV
Sbjct: 246 RSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTV 305
Query: 215 RNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC------ 268
R C T NGVR+KTWP S GIASN FEDI M+NV P++IDQ YCPY C
Sbjct: 306 RKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPS 365
Query: 269 NIKPKD----------------------SMP--NIEIGNRNLVYNGVNVKVEGPETTSLC 304
+K D +P NI + + NLV+NG EGP S C
Sbjct: 366 QVKLSDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNG----KEGP-AVSAC 420
Query: 305 SNVKPTLFGKQIPATC 320
SN+KP L GK +PA C
Sbjct: 421 SNIKPILSGKLVPAAC 436
>gi|326491385|dbj|BAK05779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 412
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 124/334 (37%), Positives = 177/334 (52%), Gaps = 68/334 (20%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK 60
+++AR+ L V+ A +V +V DFGA+ADG TDDSKAF +W +A G +
Sbjct: 20 FMISARWCLEVAH--------AGRQVFDVMDFGAIADGETDDSKAFIRAWMKACASPG-R 70
Query: 61 GTVLVPPGKYLVSFAEFEGPCKASISFQLQGLL----------------DLFSIDTSLSL 104
V++P G+Y + F GPCK + +L G+L + SID L
Sbjct: 71 AAVVIPKGEYRLQPVVFRGPCKGYMEVRLAGVLRAPDDLAAFRGSHEWINFASIDGLLVT 130
Query: 105 AKGTFHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCY 163
GTF G+GE++W LN+C N +C+ LP I+ + + TIT + S++S++FH+ I+G
Sbjct: 131 GGGTFDGRGESSWHLNECPTNPNCKPLPVSIKLGRVRNVTITAVTSLNSKFFHVIIIGSQ 190
Query: 164 NLKLNDLKITAHADS---------------------------------SKDILVSEVFCG 190
++ ++ + I A DS S DI VS V CG
Sbjct: 191 DVSIHRVTIRAPRDSPNTDGVHIQGSSNVRITDTAIATGDDCVSVGPGSADITVSGVSCG 250
Query: 191 PGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTW-----PDSHIGIASNFTFE 245
PG GISVGSLG+ +E+V GL V NCT T+NGVR+KTW P S + S FE
Sbjct: 251 PGHGISVGSLGRHPGEEDVRGLRVSNCTLAGTANGVRIKTWRGGLRPGS---VVSGLVFE 307
Query: 246 DIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNI 279
DIVM V NPI+IDQ YCPY+ + + +S P++
Sbjct: 308 DIVMRKVRNPIIIDQEYCPYSSSSCR-HESRPSV 340
>gi|449453726|ref|XP_004144607.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 454
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 122/324 (37%), Positives = 169/324 (52%), Gaps = 52/324 (16%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK 60
LL+ L+SF R + + +++ +G + G D ++A +W +A D
Sbjct: 9 LLVTTFLMSLLSFTIEAR---SHVDIFSLRKYGNIVSG-ADVTEALKDAWNDACASDR-P 63
Query: 61 GTVLVPPGKYLVSFAEFEGPCKASISFQLQGLLDL-----------FSIDTSLSLAKG-T 108
V++P G + V EF+GPCK+ I F++ G L F+ L L+ G
Sbjct: 64 SAVVIPKGTFKVREGEFKGPCKSPIEFRVHGTLQAPKHPHGDSWITFAYVDRLRLSGGGV 123
Query: 109 FHGQGETAWPLNQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 167
F GQG+ W N CHK DC +LP P RF+F+ +S + GI S+DS+ FH+NILGC NL
Sbjct: 124 FDGQGKAGWEKNDCHKRIDCAKLPIPXRFDFITNSIVRGITSLDSKNFHVNILGCNNLTF 183
Query: 168 NDLKITAHADS---------------------------------SKDILVSEVFCGPGQG 194
+ I A DS SK + ++ V CGPG G
Sbjct: 184 QGVNIIAPEDSPNTDGIHIGRSIGISILKSRIATGDDCISLGDGSKRVKITNVTCGPGHG 243
Query: 195 ISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHI-GIASNFTFEDIVMNNVE 253
IS+GSLGK +E V + V+NCT T+NGVR+KTWP S + GIA+N F DI M NV
Sbjct: 244 ISIGSLGKYTNEEPVDDVVVKNCTIMNTTNGVRIKTWPSSPVAGIATNMHFSDITMVNVS 303
Query: 254 NPIVIDQLYCPYNKCNIKPKDSMP 277
NPI+IDQ YCP+N+CN + S P
Sbjct: 304 NPILIDQEYCPWNQCNREDLASQP 327
>gi|15231880|ref|NP_187442.1| galacturan 1,4-alpha-galacturonidase [Arabidopsis thaliana]
gi|27735237|sp|P49063.2|PGLR2_ARATH RecName: Full=Exopolygalacturonase clone GBGA483; Short=ExoPG;
AltName: Full=Galacturan 1,4-alpha-galacturonidase;
AltName: Full=Pectinase; Flags: Precursor
gi|6648197|gb|AAF21195.1|AC013483_19 exopolygalacturonase [Arabidopsis thaliana]
gi|15810269|gb|AAL07022.1| putative exopolygalacturonase [Arabidopsis thaliana]
gi|20259593|gb|AAM14139.1| putative exopolygalacturonase [Arabidopsis thaliana]
gi|332641090|gb|AEE74611.1| galacturan 1,4-alpha-galacturonidase [Arabidopsis thaliana]
Length = 444
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 141/376 (37%), Positives = 184/376 (48%), Gaps = 89/376 (23%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
++VK GA D TDDS AF +W+EA T+ VP G+Y+V EF+GPCK +
Sbjct: 69 AVDVKASGAKGDSKTDDSAAFAAAWKEACAAGS---TITVPKGEYMVESLEFKGPCKGPV 125
Query: 86 SFQLQG----------------LLDLFSI-DTSLSLAKGTFHGQGETAWPLNQCHKNSDC 128
+ +L G +D +I D +L+ K F GQG AW N C K C
Sbjct: 126 TLELNGNFKAPATVKTTKPHAGWIDFENIADFTLNGNKAIFDGQGSLAWKANDCAKTGKC 185
Query: 129 -QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH------------ 175
LP IRF L +S I I S +S+ FH+NIL C N+ L+D+ I A
Sbjct: 186 NSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIG 245
Query: 176 ---------------------ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTV 214
D +++++V V CGPG GIS+GSLG+ ++ V G+TV
Sbjct: 246 RSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTV 305
Query: 215 RNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC------ 268
R C T NGVR+KTWP S GIASN FEDI M+NV P++IDQ YCPY C
Sbjct: 306 RKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPS 365
Query: 269 NIKPKD----------------------SMP--NIEIGNRNLVYNGVNVKVEGPETTSLC 304
+K D +P NI + + NLV+NG EGP S C
Sbjct: 366 QVKLSDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNG----KEGP-AVSAC 420
Query: 305 SNVKPTLFGKQIPATC 320
SN+KP L GK +PA C
Sbjct: 421 SNIKPILSGKLVPAAC 436
>gi|224127778|ref|XP_002329175.1| predicted protein [Populus trichocarpa]
gi|222870956|gb|EEF08087.1| predicted protein [Populus trichocarpa]
Length = 393
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 126/393 (32%), Positives = 190/393 (48%), Gaps = 91/393 (23%)
Query: 7 FSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP 66
FSL + ++ + +N V +V +GA D IT+ A +W+ A VL+P
Sbjct: 13 FSLFLLLASTTQA--QSNGVFDVTKYGAGKD-ITE---ALTNAWKSACA-STKPSKVLIP 65
Query: 67 PGKYLVSFAEFEGPCKASISFQLQGLL---------------DLFSIDTSLSLAKGTFHG 111
G Y + GPCKA+I Q+ G+L + +D +GTF G
Sbjct: 66 SGTYWLRKVTLAGPCKAAIKLQVDGILKAPVDPNKLSGGHWVNFRYVDQFTLSGRGTFDG 125
Query: 112 QGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
QG+ AW + CHK+ +C+ LP +RF+F+ ++ + I ++DS+ FH+N+LGC NL
Sbjct: 126 QGKVAWSKSTCHKDKNCKGLPMNLRFDFITNALVRDITTLDSKNFHVNVLGCKNLTFQHF 185
Query: 171 KITAHADS---------------------------------SKDILVSEVFCGPGQGISV 197
+ A +S ++++ ++ V CGPG GISV
Sbjct: 186 TVRAPGESVNTDGIHIGRSTGIYIIDSKISTGDDCISVGDGTEELHITGVTCGPGHGISV 245
Query: 198 GSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIV 257
GSLGK ++ V G+ V+NCT + T+NGVR+K+WP + G+ASN FEDIVMNNV+NP++
Sbjct: 246 GSLGKYPNEKPVSGIFVKNCTISDTTNGVRIKSWPALYGGVASNMHFEDIVMNNVQNPVI 305
Query: 258 IDQLYCPYNKCNIKPKDSMP------------------------------NIEIGNRNLV 287
IDQ YCP+N+C +K + +++ N NL
Sbjct: 306 IDQGYCPWNQCTLKAPSKVKISDVSFKSIRGTSATPVVVRIACSSGFPCQKVKLANINLA 365
Query: 288 YNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 320
Y G G S CSNVKP + G + C
Sbjct: 366 YRG-----PGGPAKSQCSNVKPIISGIMSASGC 393
>gi|297795453|ref|XP_002865611.1| hypothetical protein ARALYDRAFT_494865 [Arabidopsis lyrata subsp.
lyrata]
gi|297311446|gb|EFH41870.1| hypothetical protein ARALYDRAFT_494865 [Arabidopsis lyrata subsp.
lyrata]
Length = 395
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 134/393 (34%), Positives = 190/393 (48%), Gaps = 89/393 (22%)
Query: 6 RFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLV 65
F + F+ + G+ A +V N+ +D + A ++ EA + K TVL+
Sbjct: 5 HFGVSAFFVFCLLGLSANAKVFNIGSPPG-----SDITNALLKAFNEACQFP-TKSTVLI 58
Query: 66 PPGKYLVSFAEFEGPCKASISFQLQGLLD-------------LFSIDTSLSLAKGTFHGQ 112
P G+Y + GPCKA I LQG + +ID G F G+
Sbjct: 59 PKGEYKLGEIVMMGPCKAPIRIALQGTVKADGNANGKEKWVAFRNIDGFKLNGGGVFDGE 118
Query: 113 GETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLK 171
G AW +N CHK +C+ LP IRF+F+ ++ I GI S+D++ FHIN++G N+ D+K
Sbjct: 119 GNAAWRVNNCHKTFNCKKLPISIRFDFVTNAKIRGITSLDAKNFHINVIGAKNMTFEDVK 178
Query: 172 ITAHADSS---------------------------------KDILVSEVFCGPGQGISVG 198
I A A+S K++LV V CGPG GIS+G
Sbjct: 179 IIAPAESPNTDGIHVGRSDGIKIINSFISTGDDCVSVGDGMKNLLVERVTCGPGHGISIG 238
Query: 199 SLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSH-IGIASNFTFEDIVMNNVENPIV 257
SLG+ +E V G+ + NCT T NG+R+KTWP + AS+ FE+I++ NV NPI+
Sbjct: 239 SLGRYSHEENVSGIKIINCTLQETDNGLRIKTWPSAACTTTASDIHFENILLKNVSNPIL 298
Query: 258 IDQLYCPYNKCNI-KP-------------------KDSMP----------NIEIGNRNLV 287
IDQ YCP+N+CN KP KD++ N+E+G+ N+
Sbjct: 299 IDQEYCPWNQCNKQKPSTIKLANISFKKIRGTSGNKDAVKLLCSKGHPCQNVEVGDINIK 358
Query: 288 YNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 320
Y G +GP T CSNV P L G QIP C
Sbjct: 359 YTG----ADGPATFQ-CSNVSPKLVGTQIPKAC 386
>gi|359494519|ref|XP_003634794.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Vitis
vinifera]
Length = 393
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 137/378 (36%), Positives = 187/378 (49%), Gaps = 93/378 (24%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
+ V + A ADG TD ++A +WR+A + TV++P G Y + GP KA I
Sbjct: 27 IFYVTKYEAKADGNTDITQALLNAWRDAC-ASPVVSTVMIPDGTYALGQITIGGPYKAPI 85
Query: 86 SFQLQGLLDLFSIDTSLSLAK-----------------GTFHGQGETAWPL--NQCHKNS 126
+F +QG + S+DTS A+ G F+GQ A P+ +C ++
Sbjct: 86 NFNVQGTVKS-SMDTSRFKAEAGWIAFQQIDQFILSYGGVFYGQ---AKPVXGRKCPISA 141
Query: 127 DC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH---------- 175
C QLP +RFNF+ +S + I S DS+ F +N+LGC NL ++ I+A
Sbjct: 142 YCNQLPINLRFNFITNSMVKDITSRDSKQFQMNLLGCKNLTFYNVGISAPEVSINTDGIH 201
Query: 176 -----------------------ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGL 212
D S+ I + V CGPG GISVGSLGK +E VVG+
Sbjct: 202 IGRSSGFNITNSTVETGDDCVSIGDGSEQINIQSVTCGPGYGISVGSLGKCPNEEPVVGI 261
Query: 213 TVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKP 272
+V+NCTFT NG+RVKTWP SH G AS FEDIV N+V NP + DQ YCP+N+CN+K
Sbjct: 262 SVKNCTFT-XQNGMRVKTWPTSHQGTASKMHFEDIVXNDVANPKIKDQEYCPHNQCNLKS 320
Query: 273 KDSMP-----------------------------NIEIGNRNLVYNGVNVKVEGPETTSL 303
+ ++E+G+ NL YN + EGP S
Sbjct: 321 PSRIKLXVSFRNIRGTTSTQVVVKLVCDQGVPCQDVELGDINLKYN----ENEGP-AMSX 375
Query: 304 CSNVKPTLFGKQIPATCV 321
C N+KP L GKQ+P TC
Sbjct: 376 CKNIKPNLLGKQLPRTCA 393
>gi|228205057|gb|ACP74159.1| putative polygalacturonase [Brassica rapa subsp. campestris]
Length = 397
Score = 200 bits (508), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 137/398 (34%), Positives = 189/398 (47%), Gaps = 91/398 (22%)
Query: 3 LAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGT 62
+ F + V F+ + G+ A N KDF A +D + ++ EA + + +
Sbjct: 1 MGVHFGISVLFVVCLLGLSA-----NAKDFTITAPPGSDITSLLLKTFNEACQFP-TRSS 54
Query: 63 VLVPPGKYLVSFAEFEGPCKASISFQLQGLLDL------------FSIDTSLSL-AKGTF 109
VL+P G+Y + E GPCKA I LQG + F L G F
Sbjct: 55 VLIPKGEYKLRQIEMMGPCKAPIRITLQGTVKADGNVNGNDYWVAFRRINGFKLNGGGIF 114
Query: 110 HGQGETAWPLNQCHKNSDCQ---LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLK 166
G+G AW N HK + Q LP IRF+F+ D+ I GI S+DS+ FHIN+LG N+
Sbjct: 115 DGEGNAAWRANNRHKMALTQCKKLPISIRFDFVTDAKIRGITSLDSKNFHINVLGARNMT 174
Query: 167 LNDLKITAH---------------------------------ADSSKDILVSEVFCGPGQ 193
L ++ I A D ++D+LV V CGPG
Sbjct: 175 LEEITIIAPEESPNTDGIHVGRSVGVQIINSNIKTGDDCISIGDGTRDLLVERVTCGPGH 234
Query: 194 GISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIG-IASNFTFEDIVMNNV 252
GIS+GSLG +K+E+V G+ V N T T NGVR+KTWP + AS FE+I++ NV
Sbjct: 235 GISIGSLGLYVKEEDVTGIRVVNSTLINTDNGVRIKTWPSAACSTTASGIHFENIILKNV 294
Query: 253 ENPIVIDQLYCPYNKCNI-KP-------------------KDSM----------PNIEIG 282
NPI+IDQ YCP+N+CN KP KD++ N++IG
Sbjct: 295 TNPILIDQEYCPWNRCNKNKPSTIKLVDISFKHIRGTSGNKDAVKLLCSKGFPCKNVQIG 354
Query: 283 NRNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 320
+ ++ Y G +GP T CSNV PTL G Q+P C
Sbjct: 355 DIDIKYTG----ADGPATFQ-CSNVSPTLMGTQVPKAC 387
>gi|288551966|gb|ADC53480.1| polygalacturonase [Gossypium hirsutum]
Length = 412
Score = 200 bits (508), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 129/366 (35%), Positives = 173/366 (47%), Gaps = 75/366 (20%)
Query: 29 VKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASISFQ 88
V FGA AD TD SK +W+EA +++P G Y +S A +GPCKA I Q
Sbjct: 36 VAKFGAKADEKTDLSKPLLDAWKEACASTS-PSKIVIPKGIYFLSTATLDGPCKAPIELQ 94
Query: 89 LQGLLDLFSIDTSLSLAK---------------GTFHGQGETAWPLNQCHKNSDC-QLPT 132
+QG + + + K G F GQG TA+ C + C LP
Sbjct: 95 VQGTVKAPADPGAFKEPKWIAFNRIENFKLSGGGVFDGQGTTAYKREGCKGHDYCGSLPI 154
Query: 133 PIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH----------------- 175
+RF+FL ++ I I + DS+ F N+LGC N+ ++A
Sbjct: 155 NLRFDFLTNAMIQDITTKDSKQFQANVLGCKNITFEHFTVSAPDESPNTDGIHIGRSDGV 214
Query: 176 ----------------ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTF 219
D SK+++++ V CGPG GIS+GSLG +E V G+TV+NCT
Sbjct: 215 NVLNSEIKTGDDCVSIGDGSKNLVINGVTCGPGHGISIGSLGLFKNEEPVDGVTVKNCTM 274
Query: 220 TCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNI--KPKDSMP 277
T TSNGVR+KTWP + G SN FEDI + NV +PI+IDQ YCP+NKC I + K +
Sbjct: 275 TNTSNGVRIKTWPGAEPGTCSNIHFEDITVTNVSSPIIIDQKYCPWNKCKINEESKVKLS 334
Query: 278 NIEIGN---------------------RNLVYNGVNVKVEGP--ETTSLCSNVKPTLFGK 314
NI N N+ + + GP S CSNVKP + GK
Sbjct: 335 NISFKNIHGTSARPEAVKIICSATLPCENVELADIEITHSGPTGPAVSQCSNVKPKVSGK 394
Query: 315 QIPATC 320
Q PA C
Sbjct: 395 QNPAAC 400
>gi|6714530|dbj|BAA89479.1| polygalacturonase [Salix gilgiana]
Length = 393
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 127/377 (33%), Positives = 182/377 (48%), Gaps = 89/377 (23%)
Query: 23 TNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCK 82
+N V +V +G G D ++A + +W++A V +P G Y + GPCK
Sbjct: 27 SNGVFDVTKYG----GKEDITEALNNAWKDACASTN-PSKVHIPSGTYSLRQVTLAGPCK 81
Query: 83 ASISFQLQGLL---------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSD 127
A+I Q+ G+L D +D GTF GQG AW + C K+ +
Sbjct: 82 AAIELQVDGILKAPVDPNQFSGGHWVDFSHVDQLTLSGSGTFDGQGSVAWSKSTCSKDKN 141
Query: 128 CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA---------- 176
C+ P IRF+F+ + + I + DS+ FH+N+L C NL +TA A
Sbjct: 142 CEGFPMNIRFDFITNGFVRDITTRDSKNFHVNVLECKNLTFQHFTVTAPAESINTDGIHI 201
Query: 177 -----------------------DSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLT 213
D ++D+ V+ V CGPG GISVGSLG+ ++ V G+
Sbjct: 202 GRSTGIYIIDSKIGTGDDCISVGDGTEDLHVTGVTCGPGHGISVGSLGRYPNEKPVSGIF 261
Query: 214 VRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC----- 268
V+NCT + T+NGVR+K+WPD + G ASN FEDIVMNNV+NP+ +DQ YCP+N+C
Sbjct: 262 VKNCTISNTANGVRIKSWPDLYGGDASNMHFEDIVMNNVQNPVAVDQEYCPWNQCSLKAP 321
Query: 269 -----------NIKPKDSMP--------------NIEIGNRNLVYNGVNVKVEGPETTSL 303
NI+ + P +E+ + NLVY+G EGP S
Sbjct: 322 SKVKISDVSFKNIRGTSATPVVVKLACSSGIPCEKVELADINLVYSG----SEGP-AKSQ 376
Query: 304 CSNVKPTLFGKQIPATC 320
CSNVKP + G + C
Sbjct: 377 CSNVKPIISGIMSASGC 393
>gi|357117667|ref|XP_003560585.1| PREDICTED: exopolygalacturonase-like [Brachypodium distachyon]
Length = 412
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 123/328 (37%), Positives = 168/328 (51%), Gaps = 61/328 (18%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK 60
L+ AR+ L V+ A +V +V DFGAVADG TDDSKAF +W +A G +
Sbjct: 18 FLVTARWCLEVAH--------AGRQVFDVTDFGAVADGQTDDSKAFLRAWMKACAAPG-R 68
Query: 61 GTVLVPPGKYLVSFAEFEGPCKASISFQLQGLL----------------DLFSIDTSLSL 104
V+VP G+Y + F GPCK + +L G+L + ID L
Sbjct: 69 PAVVVPKGEYRLHPVVFRGPCKGYMELRLAGVLRAPDDLAAFRGSHEWVNFAGIDGLLVT 128
Query: 105 AKGTFHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCY 163
GTF G+G ++W LN C + DC LP I+ + + TIT + S+DS++FH+ I+G
Sbjct: 129 GGGTFDGRGASSWHLNDCPRKPDCTPLPVSIKLGRVRNVTITEVTSLDSKFFHVIIIGSQ 188
Query: 164 NLKLNDLKITAHADS---------------------------------SKDILVSEVFCG 190
++ ++ + I A DS S DI VS V CG
Sbjct: 189 DVAIHRVTIRAPRDSPNTDGVHIQGSSNVRITDTAVATGDDCVSVGPGSADITVSGVSCG 248
Query: 191 PGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIA--SNFTFEDIV 248
PG GISVGSLG+ +E+V GL V NCT T+NGVR+KTW A S FEDIV
Sbjct: 249 PGHGISVGSLGRHPGEEDVRGLRVSNCTLAGTANGVRIKTWRGGLRPAAGVSGLVFEDIV 308
Query: 249 MNNVENPIVIDQLYCPYNKCNIKPKDSM 276
M V NPI+IDQ YCPY+ + + + ++
Sbjct: 309 MRKVRNPIIIDQEYCPYSSSSCRHESAL 336
>gi|255570469|ref|XP_002526193.1| hypothetical protein RCOM_0764760 [Ricinus communis]
gi|223534497|gb|EEF36197.1| hypothetical protein RCOM_0764760 [Ricinus communis]
Length = 392
Score = 199 bits (507), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 129/388 (33%), Positives = 189/388 (48%), Gaps = 85/388 (21%)
Query: 3 LAARFSLLVSFIT-SVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKG 61
+ ++ ++L F+ S+ +V +VK+FGA D SKA +W+ A + G
Sbjct: 1 MKSKLNILTIFVLLSISLKIRAEKVFDVKNFGATPSQKNDISKALLDAWKAACSTPG-AS 59
Query: 62 TVLVPPGKYLVSFAEFEGPCKASISFQLQGLLDL--------------FSIDTSLSLAKG 107
+L+P KY + EGPCK S+ Q++G L F L+++ G
Sbjct: 60 RILIPHAKYALRDVLLEGPCKGSMVLQIKGTLMAPSDPSEHHSQGWITFQHVDHLTISGG 119
Query: 108 TFHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLK 166
G+G+ AW N C N +C+ LP +RF+F+ ++ I + S DS+ FH+N++GC N
Sbjct: 120 NLDGRGKIAWGKNTCRTNVNCKNLPMNLRFDFVTNTIIEDLTSRDSKNFHMNLIGCQNFT 179
Query: 167 LNDLKITAHADS---------------------------------SKDILVSEVFCGPGQ 193
L +KI A DS S++I ++ V CGPG
Sbjct: 180 LQRIKIIAPGDSANTDGIHIGRSNGVNIIDSKIGTGDDCISIGDGSRNIKITGVRCGPGH 239
Query: 194 GISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVE 253
GIS+GSLGK +E V G+ V+ C T+NG+R+K+WP + G A++ FEDI MNNV
Sbjct: 240 GISIGSLGKYKNEEPVSGVYVKKCDLINTTNGIRIKSWPGLYSGTATDLHFEDISMNNVS 299
Query: 254 NPIVIDQLYCPYNKC----------------NIKPKDSMPNI--------------EIGN 283
N I+IDQ+YCP+N C NIK S+P I E+ N
Sbjct: 300 NAILIDQMYCPWNHCNSKASSNVKISKVTFSNIKGTSSIPTIVKLLCSKGLPCEGVELNN 359
Query: 284 RNLVYNGVNVKVEGPETTSLCSNVKPTL 311
N+VY G EGP S C+NVKP +
Sbjct: 360 INVVYKG----PEGP-AKSECTNVKPKI 382
>gi|15231878|ref|NP_187441.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|6648196|gb|AAF21194.1|AC013483_18 putative polygalacturonase [Arabidopsis thaliana]
gi|332641089|gb|AEE74610.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 401
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/390 (34%), Positives = 188/390 (48%), Gaps = 92/390 (23%)
Query: 11 VSFITSVRGIDATNRVLNVKDFGAVADGITDDS-KAFDTSWREAWNWDGIKGTVLVPPGK 69
V F+ S+ G A V NV G+ IT KAF ++ + V++ G+
Sbjct: 10 VLFVISLLGFSANAEVFNVG--GSPGSDITQALLKAFTSACQAP-----TASKVVITKGE 62
Query: 70 YLVSFAEFEGPCKASISFQLQGLLD--------------LFSIDTSLSLAKGTFHGQGET 115
+ + E GPCKA + LQG L I+ G F G+G
Sbjct: 63 FKLGEIEMTGPCKAPVEINLQGTLKADGKAIQGKERWVVFLRINGFKLNGGGIFDGEGNA 122
Query: 116 AWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA 174
AW +N CHK +C+ LP IRF+F+ ++ I I S+D++ FHIN+LG N+ +++K+ A
Sbjct: 123 AWRVNNCHKTFECKKLPISIRFDFVENAEIRDISSIDAKNFHINVLGAKNMTFDNVKVIA 182
Query: 175 HADSS---------------------------------KDILVSEVFCGPGQGISVGSLG 201
A+S K++ V V CGPG GISVGSLG
Sbjct: 183 PAESPNTDGIHLGRSEGVKILNSKIATGDDCISVGDGMKNLHVENVMCGPGHGISVGSLG 242
Query: 202 KGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIG-IASNFTFEDIVMNNVENPIVIDQ 260
+ + +++V G+TV NCT T NG+R+KTWP + AS FE+I++NNV NPI+IDQ
Sbjct: 243 RYVHEQDVTGITVVNCTLQGTDNGLRIKTWPSAACATTASGIHFENIILNNVSNPILIDQ 302
Query: 261 LYCPYNKCN-IKP-------------------KDSM----------PNIEIGNRNLVYNG 290
YCP+N+CN KP KD++ N+EIGN NL Y G
Sbjct: 303 EYCPWNQCNKQKPSTIKLVDISFKNIRGTSGNKDAVKLLCSKAHPCANVEIGNINLEYKG 362
Query: 291 VNVKVEGPETTSLCSNVKPTLFGKQIPATC 320
+GP T +CSNV P L G Q P C
Sbjct: 363 ----ADGPPTF-MCSNVSPKLVGTQNPKAC 387
>gi|296084984|emb|CBI28399.3| unnamed protein product [Vitis vinifera]
Length = 358
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/320 (38%), Positives = 171/320 (53%), Gaps = 55/320 (17%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
+V +GA ADG TD S+A T+W EA I V++P G Y + EGPCKA I+
Sbjct: 26 FDVTKYGAQADGKTDISQALLTAW-EAACASPIASRVVIPAGIYALGQVTIEGPCKAPIN 84
Query: 87 FQLQGLLDLFSIDTS----------------LSLAK-GTFHGQGETAWPLNQCHKNSDC- 128
++G + +DTS +L+ G F GQG++ W +C + C
Sbjct: 85 LIVKGTVRA-PVDTSRFKPQAGWVAFQHLDQFTLSGYGVFDGQGQSVWG-QKCSRTKYCH 142
Query: 129 QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---------- 178
QLP +RFNFL +S I I S DS+ FHIN+LGC N+ + ITA DS
Sbjct: 143 QLPINLRFNFLTNSIIKDITSKDSKQFHINVLGCRNITFFQVAITAPEDSQNTDGIHIGR 202
Query: 179 -----------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVR 215
S+ I +++V CGPG GISVGSLG + V+G+ V+
Sbjct: 203 SRGVNITHSTIQTGDDCVSIGDGSEQIDITKVNCGPGHGISVGSLGLYKNEAPVIGIRVK 262
Query: 216 NCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPK-D 274
NCT + T+NGVRVKTWP S G A+ F DIVMNNV NPI+IDQ YCP+N+CN++
Sbjct: 263 NCTLSDTTNGVRVKTWPSSPQGTATEMHFHDIVMNNVSNPIIIDQEYCPHNQCNLQTSTH 322
Query: 275 SMPNIEIGNRNLVYNGVNVK 294
++ ++ + L Y +NV+
Sbjct: 323 ALEILDQYSNQLKYMRINVE 342
>gi|449454426|ref|XP_004144956.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
gi|449471315|ref|XP_004153273.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
gi|449500188|ref|XP_004161029.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
Length = 406
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/299 (38%), Positives = 170/299 (56%), Gaps = 50/299 (16%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPC 81
+++ V +V+ FGA A+G+TDDS AF +WR A + G+ T L+P G YLV F GPC
Sbjct: 42 SSSHVFSVRSFGARANGLTDDSNAFLAAWRMACDSAGVV-TFLIPKGTYLVGPVIFSGPC 100
Query: 82 K--ASISFQLQGLLDL-----------FSIDTSLSL-AKGTFHGQGETAWPLNQCHKNSD 127
K +S++ +++ +L F L+L GTF G+G AWP N C + +
Sbjct: 101 KNVSSLTVKMEASTNLSKYGSGAGWIEFRWMEGLTLNGGGTFDGRGAEAWPFNNCRDDYN 160
Query: 128 CQL-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HA 176
C+L PT ++F LN++ + I S++S++FH+ ++ C ++LKI+A H
Sbjct: 161 CKLLPTNLKFVALNNTVVQHITSLNSKFFHLALVQCKRFVGSELKISAPENSPNTDGIHI 220
Query: 177 DSSKDI-----------------------LVSEVFCGPGQGISVGSLGKGIKDEEVVGLT 213
D S +I +S V CGPG GISVGSLG+ + +V GL
Sbjct: 221 DRSSNIHFSLSHIQTGDDCISIGQGNSQVTISSVNCGPGHGISVGSLGRYRNEGDVSGLV 280
Query: 214 VRNCTFTCTSNGVRVKTWPDS-HIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK 271
V+NC+ T T+NG+R+KTWP+S A+N TFE+I MNNV NPI+IDQ YCP+ C+ K
Sbjct: 281 VKNCSLTGTANGIRIKTWPNSPGSSSATNMTFENITMNNVSNPIIIDQSYCPFGFCSFK 339
>gi|224061322|ref|XP_002300425.1| predicted protein [Populus trichocarpa]
gi|222847683|gb|EEE85230.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 129/373 (34%), Positives = 189/373 (50%), Gaps = 83/373 (22%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKAS 84
+V NVK +GAV+DG T+++KAF +W EA W G K VL+P G Y++ F G C
Sbjct: 1 KVFNVKKYGAVSDGKTENNKAFLKAWSEACQWHG-KAMVLIPRGVYILDSVLFLGECNGY 59
Query: 85 ISFQLQGLLD-------------LFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQ-L 130
++F L+G+L I GT G+G W + C KN +C L
Sbjct: 60 MAFNLKGILKPKGILQTSDQWITFRYIKGFFLGGGGTLDGEGYKHWNRHDCLKNHNCHPL 119
Query: 131 PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------ 178
+R F+ + + I+S++S+ H+++ GC NL +++L+++A DS
Sbjct: 120 AISLRLEFIQNGMVRYIRSINSQNAHMSLFGCVNLNMSNLRLSAPGDSPNTDGIKIGSSE 179
Query: 179 ---------------------SKDILVSEVFCGPGQGISVGSLG-KGIKDEEVVGLTVRN 216
SK+I +S+V CGPG GISVGS+G +G E VVG+TV++
Sbjct: 180 EIKISKTRIGTGDDCVAILSGSKNINISQVHCGPGHGISVGSMGGEGSVTESVVGVTVKD 239
Query: 217 CTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSM 276
CTF TS+G R+KTW S G+ASNF +E+I M NV NPI+IDQ YCPY C +K +
Sbjct: 240 CTFNGTSDGTRIKTWASSTTGVASNFIYENIRMMNVGNPIIIDQDYCPYPPCGMK---TP 296
Query: 277 PNIEIGNRNLVYNGV------NVKV-----------------------EGPETTSLCSNV 307
I+I +++ +N + NV V G SLCSN
Sbjct: 297 SRIQI--KDITFNNIWGTSESNVAVTLNCSRTVPCKNILLKDISFFHGRGGSVRSLCSNA 354
Query: 308 KPTLFGKQIPATC 320
+ T +G+Q P +C
Sbjct: 355 RGTSYGRQTPPSC 367
>gi|15238902|ref|NP_199625.1| putative polygalacturonase / pectinase [Arabidopsis thaliana]
gi|8777404|dbj|BAA96994.1| polygalacturonase [Arabidopsis thaliana]
gi|26452386|dbj|BAC43278.1| putative polygalacturonase [Arabidopsis thaliana]
gi|32441260|gb|AAP81805.1| At5g48140 [Arabidopsis thaliana]
gi|332008240|gb|AED95623.1| putative polygalacturonase / pectinase [Arabidopsis thaliana]
Length = 395
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 131/393 (33%), Positives = 190/393 (48%), Gaps = 89/393 (22%)
Query: 6 RFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLV 65
F + F+ + G+ A ++ N+ +D + A ++ EA + K TV++
Sbjct: 5 HFGVSAFFVFCLLGLSANAKIFNINSPPG-----SDITNALLKAFNEACQFP-TKSTVMI 58
Query: 66 PPGKYLVSFAEFEGPCKASISFQLQGLLD-------------LFSIDTSLSLAKGTFHGQ 112
P G+Y + GPCKA I L G + +I+ G F G+
Sbjct: 59 PKGEYKLGEIVMMGPCKAPIRIALLGTVKADGNANGKEKWVAFRNINGFKLNGGGVFDGE 118
Query: 113 GETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLK 171
G AW +N CHK +C+ LP IRF+F+ D+ I GI S+D+++FHIN++G N+ D+K
Sbjct: 119 GNAAWRVNNCHKTFNCKKLPISIRFDFVTDAKIRGITSLDAKHFHINVIGAKNVTFEDVK 178
Query: 172 ITAHADSS---------------------------------KDILVSEVFCGPGQGISVG 198
I A A+S K++LV V CGPG GIS+G
Sbjct: 179 IIAPAESPNTDGIHVGRSDGIKIINSFISTGDDCVSVGDGMKNLLVERVTCGPGHGISIG 238
Query: 199 SLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSH-IGIASNFTFEDIVMNNVENPIV 257
SLG+ +E V G+ + NCT T NG+R+KTWP + AS+ FE+I++ NV NPI+
Sbjct: 239 SLGRYSHEENVSGIKIINCTLQETDNGLRIKTWPSAACTTTASDIHFENILLKNVSNPIL 298
Query: 258 IDQLYCPYNKCNI-KP-------------------KDSMP----------NIEIGNRNLV 287
IDQ YCP+N+CN KP KD++ N+E+G+ N+
Sbjct: 299 IDQEYCPWNQCNKQKPSTIKLANISFKKIRGTSGNKDAVKLLCSKGYPCQNVEVGDVNIQ 358
Query: 288 YNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 320
Y G +GP T CSNV P L G QIP C
Sbjct: 359 YTG----ADGPATFQ-CSNVSPKLVGTQIPKAC 386
>gi|297743916|emb|CBI36886.3| unnamed protein product [Vitis vinifera]
Length = 426
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 130/378 (34%), Positives = 183/378 (48%), Gaps = 78/378 (20%)
Query: 21 DATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGP 80
D V +V +GAVADG TD+ +AF +W A +W G TVL+P GK+LV A FEGP
Sbjct: 39 DTGATVFDVTKYGAVADGKTDNVEAFMKTWLAACHWRGTS-TVLIPEGKFLVGQATFEGP 97
Query: 81 CKAS--ISFQLQGL---------------LDLFSIDTSLSLAKGTFHGQGETAWPLNQCH 123
C + I F+ +G L ++ + GTF GQG AW N CH
Sbjct: 98 CNSPNPIVFEARGTVLAQPDLSEYPSPEWLMFEDVNQLILKGGGTFDGQGVFAWKYNDCH 157
Query: 124 KNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---- 178
+N+DCQ LPT ++FN +N+S + I S+DS+ FH I YN +L ITA +S
Sbjct: 158 QNADCQMLPTNLKFNKVNNSVVQDITSLDSKSFHYFITNSYNFTAFNLTITAPGNSPNTD 217
Query: 179 -----------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEV 209
S +I ++ V+CGPG G+S+GSLGK +++V
Sbjct: 218 GMHLSRCDLVNLSNFTIKTGDDCISVGQGSTNINITNVYCGPGHGLSIGSLGKYPNEKDV 277
Query: 210 VGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPY--NK 267
VG+ V NCT T+NG R+KTWP S AS+ F+DIVMN+V+NPI+IDQ Y +
Sbjct: 278 VGIHVTNCTLNGTTNGARIKTWPGSPPSQASSIIFQDIVMNSVKNPILIDQKYGSHTGKP 337
Query: 268 CNIKPKDSMPN------------------------IEIGNRNLVYNGVNVKVEGPETTSL 303
+K D + +++ + + YNG E +S
Sbjct: 338 SRVKVSDVLYKNLRGTTISKVAVSLVCSELVPCNGLQLEDIDFTYNGPATFKENLPFSST 397
Query: 304 CSNVKPTLFGKQIPATCV 321
C + + GKQ P C
Sbjct: 398 CLHANASYVGKQNPPACA 415
>gi|359485803|ref|XP_002273500.2| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase [Vitis vinifera]
Length = 387
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 120/296 (40%), Positives = 160/296 (54%), Gaps = 54/296 (18%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
+V +GA ADG TD S+A T+W EA I V++P G Y + EGPCKA I+
Sbjct: 26 FDVTKYGAQADGKTDISQALLTAW-EAACASPIASRVVIPAGIYALGQVTIEGPCKAPIN 84
Query: 87 FQLQGLLDLFSIDTS----------------LSLAK-GTFHGQGETAWPLNQCHKNSDC- 128
++G + +DTS +L+ G F GQG++ W +C + C
Sbjct: 85 LIVKGTVRA-PVDTSRFKPQAGWVAFQHLDQFTLSGYGVFDGQGQSVWG-QKCSRTKYCH 142
Query: 129 QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---------- 178
QLP +RFNFL +S I I S DS+ FHIN+LGC N+ + ITA DS
Sbjct: 143 QLPINLRFNFLTNSIIKDITSKDSKQFHINVLGCRNITFFQVAITAPEDSQNTDGIHIGR 202
Query: 179 -----------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVR 215
S+ I +++V CGPG GISVGSLG + V+G+ V+
Sbjct: 203 SRGVNITHSTIQTGDDCVSIGDGSEQIDITKVNCGPGHGISVGSLGLYKNEAPVIGIRVK 262
Query: 216 NCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK 271
NCT + T+NGVRVKTWP S G A+ F DIVMNNV NPI+IDQ YCP+N+CN++
Sbjct: 263 NCTLSDTTNGVRVKTWPSSPQGTATEMHFHDIVMNNVSNPIIIDQEYCPHNQCNLQ 318
>gi|225431792|ref|XP_002272193.1| PREDICTED: exopolygalacturonase [Vitis vinifera]
gi|296083328|emb|CBI22964.3| unnamed protein product [Vitis vinifera]
Length = 427
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 130/384 (33%), Positives = 183/384 (47%), Gaps = 85/384 (22%)
Query: 18 RGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEF 77
RG + NV +GA G D ++AF +W A +W G K +L+P G +L+ F
Sbjct: 47 RGSIPGETIFNVLQYGAKPGGKKDSTEAFMKAWVAACHWRG-KARLLIPQGIFLIGQVTF 105
Query: 78 EGPCKA------SISFQLQGLLDLFS-----------IDTSLSLAKGTFHGQGETAWPLN 120
+GPC + ++ L+ + D+ I+ + GTF GQG+ W N
Sbjct: 106 QGPCNSPTPIIVQVAATLKAVTDISEFASPEWVTFEDINGLIVTGGGTFDGQGDVVWKYN 165
Query: 121 QCHKNSDCQL-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS- 178
C +NS+CQL PT I+FN + + + GI SV+++ FHI + C N + L ITA DS
Sbjct: 166 DCRRNSNCQLLPTSIKFNSITNGNLRGINSVNAKSFHIAMNRCQNFRAFGLHITAPEDSP 225
Query: 179 --------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKD 206
S +I +++V CGPG GIS+GSLGK +
Sbjct: 226 NTDGIHISSSNFVKVSKSIISTGDDCISIGQGSTNISINKVTCGPGHGISIGSLGKYPDE 285
Query: 207 EEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYN 266
++V+G+ V+N T T NG+R+KTWP S AS F+DI+M NV+NPI+IDQLYCP
Sbjct: 286 KDVIGIIVKNSTLMNTDNGLRIKTWPGSPPSQASGILFQDIIMKNVKNPIIIDQLYCPSG 345
Query: 267 KC----------------NIKPKDSMP--------------NIEIGNRNLVYNGVNVKVE 296
NI+ S P N+E+ + NL Y+G K
Sbjct: 346 SSCRTQPSRVRISNIHYRNIRGTSSSPLGVNLMCSPQFPCQNVELFDINLRYSG---KRR 402
Query: 297 GPETTSLCSNVKPTLFGKQIPATC 320
TS CSNVK G QIP C
Sbjct: 403 VSALTSSCSNVKAGFGGVQIPPPC 426
>gi|449506924|ref|XP_004162885.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Cucumis
sativus]
Length = 402
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 133/388 (34%), Positives = 186/388 (47%), Gaps = 85/388 (21%)
Query: 9 LLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG 68
+L+SF R + + +++ +G + G+ D ++A +W +A V++P G
Sbjct: 15 ILLSFTIESR--SHVDVIFHLRKYGNIVSGV-DVTEALKDAWNDACA-SVPPSAVIIPKG 70
Query: 69 KYLVSFAEFEGPCKASISFQLQGLLDL-----------FSIDTSLSLAKGTFHGQGETAW 117
+ V EF+GPCK+ I +++G L F + L+ G F GQG+ W
Sbjct: 71 IFKVREGEFKGPCKSPIEMRVRGTLQALNHPQGDSWITFVYVDRMKLSGGVFDGQGKEGW 130
Query: 118 PLNQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 176
N CHK +C LP +RFNF+ + + I S+DS+ H+NILGC NL + I A
Sbjct: 131 XKNDCHKCINCANLPISLRFNFITNXIVRRITSLDSKNSHVNILGCNNLTFQGVNIIAPE 190
Query: 177 DS---------------------------------SKDILVSEVFCGPGQGISVGSLGKG 203
DS SK + V++V CGPG GIS+GSLGK
Sbjct: 191 DSPNTDEIHIGRSIRISILKSRIAIGDDCISLGNGSKRVKVTDVTCGPGHGISIGSLGKY 250
Query: 204 IKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHI-GIASNFTFEDIVMNNVENPIVIDQLY 262
+E V G+ V+NCT T+NGVR+KTW S + GIA F DI M NV NPI+IDQ Y
Sbjct: 251 TNEEPVEGVVVKNCTIMNTTNGVRIKTWSASPVAGIAIIMHFSDITMINVSNPILIDQEY 310
Query: 263 CPYNKCNIK-------PKDSMPNI-----------------------EIGNRNLVYNGVN 292
CP+N+CN + K S NI ++ N +LVYNG
Sbjct: 311 CPWNQCNRQIPSKIKINKVSFKNIRGCSATSVAVKLICSSNLPCEEVKVANIDLVYNGTK 370
Query: 293 VKVEGPETTSLCSNVKPTLFGKQIPATC 320
+ TS C NVKP L G Q P+ C
Sbjct: 371 GSI-----TSQCMNVKPILSGIQNPSIC 393
>gi|414868396|tpg|DAA46953.1| TPA: hypothetical protein ZEAMMB73_391654 [Zea mays]
Length = 390
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 132/392 (33%), Positives = 197/392 (50%), Gaps = 77/392 (19%)
Query: 3 LAARFSLL---VSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGI 59
+ AR LL V+ S+ + A V+NVK++GA +G+ DD+K +W+ A G
Sbjct: 1 MEARPRLLLVVVAIFVSISAVAAA--VINVKNYGAHGNGVNDDTKPLMAAWKAACGSAG- 57
Query: 60 KGTVLVPPGKYLVSFAEFEGPCKAS-ISFQLQGLL----DL---------FSIDTSLSLA 105
T++VPPG Y + +F GPCKAS ++FQLQG L DL F L++A
Sbjct: 58 AATMVVPPGTYYIGPVQFHGPCKASTLTFQLQGTLKAATDLKRFGNDWIEFGWVNGLTVA 117
Query: 106 KGTFHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYN 164
G GQG +WP N+C DC+ LPT + F ++ + + SV+ ++FH+ +L N
Sbjct: 118 GGVIDGQGAASWPFNKCPIRKDCKVLPTSVLFVNNQNTVVRDVTSVNPKFFHMALLSVKN 177
Query: 165 LKLNDLKITAHADS---------------------------------SKDILVSEVFCGP 191
++++ LKI+A ++S + ++ V+ V CGP
Sbjct: 178 IRMSGLKISAPSNSPNTDGIHIERSSGISIMDTHISTGDDCISIGQGNDNVDVARVQCGP 237
Query: 192 GQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDS-HIGIASNFTFEDIVMN 250
G G+SVGSLG+ + +V + VR+ TFT T NGVR+KTW +S A++ FE++VM
Sbjct: 238 GHGMSVGSLGRYSGEGDVTRVHVRDMTFTGTMNGVRIKTWENSPSKSNAAHMVFENMVMR 297
Query: 251 NVENPIVIDQLYCPYNKC----------------NIKPKDSMP-----NIEIGNRNLVYN 289
+V+NPI+IDQ YCPY C NIK + P + R LV
Sbjct: 298 DVQNPIIIDQKYCPYYNCEHKYVSGVTLNDIHFKNIKGTATTPVAVLLRCGVPCRGLVLQ 357
Query: 290 GVNVKVEGPETTSL-CSNVKPTLFGKQIPATC 320
V+++ +G TS C N K G Q P C
Sbjct: 358 DVDLRYKGQGGTSAKCENAKAKYLGYQFPKPC 389
>gi|449453569|ref|XP_004144529.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 412
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 129/368 (35%), Positives = 182/368 (49%), Gaps = 75/368 (20%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
+ ++ +GA + TD ++A +W++A +L+P G Y ++ + GPCK++I
Sbjct: 37 IFDITTYGAKPN--TDITQALANAWKDAC-ASTYSSKLLIPMGVYHLNQSILHGPCKSTI 93
Query: 86 SFQLQGLLD-----------LFSIDTSLSLA-KGTFHGQGETAWPLNQCHKNSDC-QLPT 132
+++G L LF L+L+ G F GQGE W N CH C +LP
Sbjct: 94 EVRMEGTLQAHPDPIGDGLVLFQYIDQLTLSGTGAFDGQGEKGWEKNDCHLKKICTKLPM 153
Query: 133 PIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH----------------- 175
++F+F+ +S + I S+DS+ FH N+LGC N+ ++ I A
Sbjct: 154 NVKFSFVTNSMVKDITSLDSKNFHFNLLGCKNVTFQNVTIIAPENSPNTDGIHVSSSEVI 213
Query: 176 ----------------ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTF 219
DS+K I ++ V CGPG GIS+GSLGK K++EV G+TV++C
Sbjct: 214 NIFNTRISTGDDCISVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKEVAGVTVKSCKL 273
Query: 220 TCTSNGVRVKTWPDSHIG-IASNFTFEDIVMNNVENPIVIDQLYCPYNKCN--IKPKDSM 276
TSNGVR+KTWPD + AS+ FEDI M NV NP++IDQ YCP N+CN I K +
Sbjct: 274 INTSNGVRIKTWPDCAVAYTASDLHFEDIEMVNVSNPVIIDQEYCPSNQCNKKIPSKIKI 333
Query: 277 PNIEIGN-RNLVYNGVNVK--------VEGPET--------------TSLCSNVKPTLFG 313
N+ N R V VK EG E TS C NV P + G
Sbjct: 334 SNVSFKNIRGTSATFVAVKFICSTVFSCEGVEVTDIDLAYIGTQGRITSQCRNVIPIITG 393
Query: 314 KQIPATCV 321
KQ P CV
Sbjct: 394 KQNPRACV 401
>gi|413943665|gb|AFW76314.1| hypothetical protein ZEAMMB73_313945 [Zea mays]
Length = 426
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 121/324 (37%), Positives = 160/324 (49%), Gaps = 82/324 (25%)
Query: 24 NRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKA 83
RV NV DFGAVADG TDDS+AF +W EA G + V+VP G YL+ F GPC+
Sbjct: 27 GRVFNVSDFGAVADGRTDDSEAFLRAWTEACATPG-RPAVVVPRGDYLLHPLVFRGPCRG 85
Query: 84 SISFQLQGLL----------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSD 127
+ + G+L SID L GTF G+G TAWPLN+C + D
Sbjct: 86 YVEVHVGGVLRAPPGLAAFRGCREWVHFSSIDGLLVTGGGTFDGRGATAWPLNECPQKRD 145
Query: 128 CQL-PT-----------------------PIRFNFLNDSTITGIKSVDSRYFHINILGCY 163
C+L PT I+ + ++TITG+ S+DS++FH+ ++G
Sbjct: 146 CRLLPTVSSATCATILLHSDIIVVQRRHQSIKLGLVRNATITGVTSLDSKFFHVAVVGSQ 205
Query: 164 NLKLNDLKITAHADS---------------------------------SKDILVSEVFCG 190
+++++ + I A S S D+LVS V CG
Sbjct: 206 DVRIHGVSIRAPRSSPNTDGVHIQGSSNVRVTDSAVATGDDCVSVGPGSSDVLVSGVACG 265
Query: 191 PGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKT-----WPDSHIGIASNFTFE 245
PG GISVGSLG+ + +V L V NCT TSNGVR+KT WP + + + FE
Sbjct: 266 PGHGISVGSLGRYPGEGDVRRLRVANCTVAGTSNGVRIKTWRGGSWPPTAV---AGLVFE 322
Query: 246 DIVMNNVENPIVIDQLYCPYNKCN 269
DIVM V NPI+IDQ YCPY C
Sbjct: 323 DIVMRKVRNPIIIDQEYCPYPSCR 346
>gi|238014862|gb|ACR38466.1| unknown [Zea mays]
Length = 360
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 121/324 (37%), Positives = 160/324 (49%), Gaps = 82/324 (25%)
Query: 24 NRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKA 83
RV NV DFGAVADG TDDS+AF +W EA G + V+VP G YL+ F GPC+
Sbjct: 27 GRVFNVSDFGAVADGRTDDSEAFLRAWTEACATPG-RPAVVVPRGDYLLHPLVFRGPCRG 85
Query: 84 SISFQLQGLL----------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSD 127
+ + G+L SID L GTF G+G TAWPLN+C + D
Sbjct: 86 YVEVHVGGVLRAPPGLAAFRGCREWVHFSSIDGLLVTGGGTFDGRGATAWPLNECPQKRD 145
Query: 128 CQL-PT-----------------------PIRFNFLNDSTITGIKSVDSRYFHINILGCY 163
C+L PT I+ + ++TITG+ S+DS++FH+ ++G
Sbjct: 146 CRLLPTVSSATCATILLHSDIIVVQRRHQSIKLGLVRNATITGVTSLDSKFFHVAVVGSQ 205
Query: 164 NLKLNDLKITAHADS---------------------------------SKDILVSEVFCG 190
+++++ + I A S S D+LVS V CG
Sbjct: 206 DVRIHGVSIRAPRSSPNTDGVHIQGSSNVRVTDSAVATGDDCVSVGPGSSDVLVSGVACG 265
Query: 191 PGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKT-----WPDSHIGIASNFTFE 245
PG GISVGSLG+ + +V L V NCT TSNGVR+KT WP + + + FE
Sbjct: 266 PGHGISVGSLGRYPGEGDVRRLRVANCTVAGTSNGVRIKTWRGGSWPPTAV---AGLVFE 322
Query: 246 DIVMNNVENPIVIDQLYCPYNKCN 269
DIVM V NPI+IDQ YCPY C
Sbjct: 323 DIVMRKVRNPIIIDQEYCPYPSCR 346
>gi|548491|sp|Q05967.1|PGLR_TOBAC RecName: Full=Polygalacturonase; Short=PG; AltName: Full=Pectinase;
Flags: Precursor
gi|22701|emb|CAA50338.1| polygalacturonase [Nicotiana tabacum]
Length = 396
Score = 197 bits (500), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 126/399 (31%), Positives = 196/399 (49%), Gaps = 92/399 (23%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK 60
L F+L++ F+ ++ V ++ +GA ++ D S+A +++EA
Sbjct: 3 LKFKVHFALVLLFLAHFG--ESQTGVFDITKYGANSNA--DISEALLNAFKEACQSTS-P 57
Query: 61 GTVLVPPGKYLVSFAEFEGPCKASISFQLQGLLDLFSIDTSLSLAK-------------- 106
T+++P G + ++ + EGPCK+ + Q+Q L S + L + +
Sbjct: 58 STIVIPKGTFTMNQVKLEGPCKSPLELQIQATLKAPSDPSQLKVGEWLTVNKLDQFTMSG 117
Query: 107 -GTFHGQGETAWPLNQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYN 164
G GQ AW +C ++ C +LP + FN L +STI I ++DS+ FH+N+ C N
Sbjct: 118 GGILDGQAAAAW---ECKQSKKCNKLPNNLSFNSLTNSTIKDITTLDSKSFHVNVNQCKN 174
Query: 165 LKLNDLKITAHA---------------------------------DSSKDILVSEVFCGP 191
L ++A A D ++ + ++ V CGP
Sbjct: 175 LTFIRFNVSAPANSPNTDGIHVSRSSSVNITDSNFSTGDDCISVGDETEQLYITRVTCGP 234
Query: 192 GQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNN 251
G GISVGSLG ++ VVG+ VRNCTFT T NGVR+KTWP SH G+ ++ FEDI++ N
Sbjct: 235 GHGISVGSLGGNPDEKPVVGVFVRNCTFTNTDNGVRIKTWPASHPGVVNDVHFEDIIVQN 294
Query: 252 VENPIVIDQLYCPYNKCN--------------------IKPKDSM----------PNIEI 281
V NP+VIDQ+YCP+NKCN + +D++ IE+
Sbjct: 295 VSNPVVIDQVYCPFNKCNKDLPSQVKISKVSFQNIKGTSRTQDAVSLLRSKGVPCEGIEV 354
Query: 282 GNRNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 320
G+ ++ Y+G EGP +S C N+KP+L GKQ P C
Sbjct: 355 GDIDITYSG----KEGPAKSS-CENIKPSLKGKQNPPVC 388
>gi|449508876|ref|XP_004163433.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 412
Score = 196 bits (499), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 129/368 (35%), Positives = 182/368 (49%), Gaps = 75/368 (20%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
+ ++ +GA + TD ++A +W++A +L+P G Y ++ + GPCK++I
Sbjct: 37 IFDITTYGAKPN--TDITQALANAWKDAC-ASTYSSKLLIPMGVYHLNQSILHGPCKSTI 93
Query: 86 SFQLQGLLD-----------LFSIDTSLSLA-KGTFHGQGETAWPLNQCHKNSDC-QLPT 132
+++G L LF L+L+ G F GQGE W N CH C +LP
Sbjct: 94 EVRMEGTLQAHPDPIGDGLVLFQYIDQLTLSGTGAFDGQGEKGWEKNDCHLKKICTKLPM 153
Query: 133 PIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH----------------- 175
++F+F+ +S + I S+DS+ FH N+LGC N+ ++ I A
Sbjct: 154 NVKFSFVTNSMVKDITSLDSKNFHFNLLGCKNVTFQNVTIIAPENSPNTDGIHVSSSEVI 213
Query: 176 ----------------ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTF 219
DS+K I ++ V CGPG GIS+GSLGK K++EV G+TV++C
Sbjct: 214 NIFNTRISTGDDCISVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKEVAGVTVKSCKL 273
Query: 220 TCTSNGVRVKTWPDSHIG-IASNFTFEDIVMNNVENPIVIDQLYCPYNKCN--IKPKDSM 276
TSNGVR+KTWPD + AS+ FEDI M NV NP++IDQ YCP N+CN I K +
Sbjct: 274 INTSNGVRIKTWPDCAVAYTASDLHFEDIEMVNVSNPVIIDQEYCPSNQCNKKIPSKIKI 333
Query: 277 PNIEIGN-RNLVYNGVNVK--------VEGPET--------------TSLCSNVKPTLFG 313
N+ N R V VK EG E TS C NV P + G
Sbjct: 334 NNVSFKNIRGTSATFVAVKFICSTVFSCEGVEVTDIDLAYIGTQGRITSQCRNVIPIITG 393
Query: 314 KQIPATCV 321
KQ P CV
Sbjct: 394 KQNPRACV 401
>gi|388505978|gb|AFK41055.1| unknown [Lotus japonicus]
Length = 394
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 131/388 (33%), Positives = 190/388 (48%), Gaps = 82/388 (21%)
Query: 10 LVSFITSVRGID-ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG 68
+++F++ + G A + VL + FG + D ++AF +W++A +++P G
Sbjct: 9 IIAFVSFLYGFSTAQSWVLEISKFGGAPNA--DITQAFTNAWKKACE-STTSAKIVIPHG 65
Query: 69 KYLVSFAEFEGPCKASISFQLQGLLDL---------------FSIDTSLSLA-KGTFHGQ 112
Y + + +GPCKA I Q+ G + FS + +L+ KG F G
Sbjct: 66 TYKMGAVQVQGPCKAHIEVQVDGTIKAPVNPRNFKGAGTWVQFSYISFFTLSGKGVFDGV 125
Query: 113 GETAWPLNQCHKNSDCQL-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLK 171
GETAW N C KN C L P FN++N+S + I S DS+ F++N+LGC N + K
Sbjct: 126 GETAWKRNDCSKNKHCTLLPMNFAFNYVNNSIVRDITSKDSKSFNVNVLGCNNFTFDGFK 185
Query: 172 ITAHA---------------------------------DSSKDILVSEVFCGPGQGISVG 198
I A A D K++LV V CGPG G+SVG
Sbjct: 186 IVALALSPNTDGIHVGRSTDVKILNTNIGTGDDCVSLGDGIKNVLVRNVNCGPGHGVSVG 245
Query: 199 SLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIA--SNFTFEDIVMNNVENPI 256
SLGK ++ V G V+NCT T T NGVR+KTWP S G A ++ FEDI+M NV+NPI
Sbjct: 246 SLGKYPDEKPVEGFYVKNCTLTNTDNGVRIKTWP-STPGTAPITDMHFEDIIMVNVKNPI 304
Query: 257 VIDQLYCPYNKCNIKPKDSMPNIEIGNRNLV-----------------------YNGVNV 293
+IDQ YCP+N+C+ K + ++ +N+ NGV++
Sbjct: 305 IIDQEYCPWNQCSKKSPSKIKISKVSFKNIRGTSATPEGVILICSSGVPCDTVELNGVDL 364
Query: 294 KVEGPETTSLCSNVKPTLFGKQIPATCV 321
G T+ C+NVKP + GK TCV
Sbjct: 365 TFNGAPATAKCANVKPIVTGKA--PTCV 390
>gi|449483282|ref|XP_004156544.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
Length = 403
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/308 (37%), Positives = 171/308 (55%), Gaps = 55/308 (17%)
Query: 16 SVRGIDATN-----RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKY 70
S++ ++A N + NV +GA+ DG TD+SKAF +W +A W G +G V VP G +
Sbjct: 20 SIQELEAYNYAGIPKFFNVVKYGAIPDGKTDNSKAFLKAWNDACEWKG-RGRVYVPKGTF 78
Query: 71 LVSFAEFEGPCKASISFQLQGLL----DLFS-----------IDTSLSLAKGTFHGQGET 115
+ F GPC+ +F ++G+L D+ S +D+ G+ GQG
Sbjct: 79 KLGEVLFLGPCEGHTAFVVKGILKASTDMSSLYGDSWINFRYVDSLTVGGGGSLDGQGAI 138
Query: 116 AWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA 174
AWP N C N +C+ LPT ++F+F+ +S + ++S+DS+ H + GC N+ + +++I+A
Sbjct: 139 AWPRNDCRNNPNCRSLPTTMKFDFITNSKVHNLRSIDSKNNHFMLFGCSNINITNIRISA 198
Query: 175 HADS---------------------------------SKDILVSEVFCGPGQGISVGSLG 201
DS SK+I +S V CGPG GIS+GSLG
Sbjct: 199 PGDSPNTDGIKIGTSDHIDIRNSIIGTGDDCISMLSGSKNIYISNVVCGPGHGISIGSLG 258
Query: 202 KGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQL 261
K ++E V+G+TV+NCTF T++GVR+KTW +G A N +EDI M+ V NPI+IDQ
Sbjct: 259 KYKEEENVMGITVKNCTFKNTTDGVRIKTWATPLMGTAYNIYYEDIFMDGVANPIIIDQE 318
Query: 262 YCPYNKCN 269
YCP + CN
Sbjct: 319 YCPVSPCN 326
>gi|224109146|ref|XP_002333303.1| predicted protein [Populus trichocarpa]
gi|222835934|gb|EEE74355.1| predicted protein [Populus trichocarpa]
Length = 326
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/314 (35%), Positives = 168/314 (53%), Gaps = 56/314 (17%)
Query: 7 FSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP 66
FSL + ++ + +N V +V +GA D IT+ A +W+ A VL+P
Sbjct: 13 FSLFLLLASTTQA--QSNGVFDVTKYGAGKD-ITE---ALTNAWKSACA-STKPSKVLIP 65
Query: 67 PGKYLVSFAEFEGPCKASISFQLQGLL---------------DLFSIDTSLSLAKGTFHG 111
G Y + GPCKA+I Q+ G+L + +D +GTF G
Sbjct: 66 SGTYWLRKVTLAGPCKAAIKLQVDGILKAPVDPNKLSGGHWVNFRYVDQFTLSGRGTFDG 125
Query: 112 QGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
QG+ AW + CHK+ +C+ LP +RF+F+ ++ + I ++DS+ FH+N+LGC NL
Sbjct: 126 QGKVAWSKSTCHKDKNCKGLPMNLRFDFITNALVRDITTLDSKNFHVNVLGCKNLTFQHF 185
Query: 171 KITAHA---------------------------------DSSKDILVSEVFCGPGQGISV 197
+ A D ++++ ++ V CGPG GISV
Sbjct: 186 TVRAPGESVNTDGIHIGRSTGIYIIDSKISTGDDCISVGDGTEELHITGVTCGPGHGISV 245
Query: 198 GSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIV 257
GSLGK ++ V G+ V+NCT + T+NGVR+K+WP + G+ASN FEDIVMNNV+NP++
Sbjct: 246 GSLGKYPNEKPVSGIFVKNCTISDTTNGVRIKSWPALYGGVASNMHFEDIVMNNVQNPVI 305
Query: 258 IDQLYCPYNKCNIK 271
IDQ YCP+N+C +K
Sbjct: 306 IDQGYCPWNQCTLK 319
>gi|7435386|pir||S46530 polygalacturonase (EC 3.2.1.15) precursor (clone pC27.X and clone
pC27.Y) - common tobacco (fragment)
gi|1345548|emb|CAA50334.1| polygalacturonase [Nicotiana tabacum]
gi|1345549|emb|CAA50336.1| polygalacturonase [Nicotiana tabacum]
Length = 385
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 122/374 (32%), Positives = 186/374 (49%), Gaps = 90/374 (24%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
V ++ +GA ++ D S+A +++EA T+++P G + ++ + EGPCK+ +
Sbjct: 15 VFDITKYGANSNA--DISEALLNAFKEACQSTS-PSTIVIPKGTFTMNQVKLEGPCKSPL 71
Query: 86 SFQLQGLLDLFSIDTSLSLAK---------------GTFHGQGETAWPLNQCHKNSDC-Q 129
Q+Q L S + L + + G GQ AW +C ++ C +
Sbjct: 72 ELQIQATLKAPSDPSQLKVGEWLTVNKLDQFTMSGGGILDGQAAAAW---ECKQSKKCNK 128
Query: 130 LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA------------- 176
LP + FN L +STI I ++DS+ FH+N+ C NL ++A A
Sbjct: 129 LPNNLSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRFNVSAPANSPNTDGIHVSRS 188
Query: 177 --------------------DSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRN 216
D ++ + ++ V CGPG GISVGSLG ++ VVG+ VRN
Sbjct: 189 SSVNITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGISVGSLGGNPDEKPVVGVFVRN 248
Query: 217 CTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCN------- 269
CTFT T NGVR+KTWP SH G+ ++ FEDI++ NV NP+VIDQ+YCP+NKCN
Sbjct: 249 CTFTNTDNGVRIKTWPASHPGVVNDVHFEDIIVQNVSNPVVIDQVYCPFNKCNKDLPSQV 308
Query: 270 -------------IKPKDSM----------PNIEIGNRNLVYNGVNVKVEGPETTSLCSN 306
+ +D++ IE+G+ ++ Y+G EGP +S C N
Sbjct: 309 KISKVSFQNIKGTSRTQDAVSLLCSKGVPCEGIEVGDIDITYSG----KEGPAKSS-CEN 363
Query: 307 VKPTLFGKQIPATC 320
+KP+L GKQ P C
Sbjct: 364 IKPSLKGKQNPPVC 377
>gi|147835149|emb|CAN65674.1| hypothetical protein VITISV_002009 [Vitis vinifera]
Length = 1260
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 129/355 (36%), Positives = 176/355 (49%), Gaps = 79/355 (22%)
Query: 43 SKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLLDLFSIDTSL 102
+KA T+W EA I V++P G Y + EGPCKA I+ ++G + +DTS
Sbjct: 906 AKALLTAW-EAACASPIVSRVVIPAGIYALGQVTIEGPCKAPINLIVKGTVRA-PVDTSR 963
Query: 103 SLAK-----------------GTFHGQGETAWPLNQCHKNSDC-QLPTPIRFNFLNDSTI 144
+ G F GQG++ W +C + C QLP +RFNFL +S I
Sbjct: 964 FKPQAGWVAFQHLDQFTLSGYGVFDGQGQSVWG-QKCSRTKYCHQLPINLRFNFLTNSII 1022
Query: 145 TGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-------------------------- 178
I S DS+ FHIN+LGC N+ + ITA DS
Sbjct: 1023 KDITSKDSKQFHINVLGCRNITFFQVAITAPEDSQNTDGIHIGRSRGVNITHSTIQTGDD 1082
Query: 179 -------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTW 231
S+ I +++V CGPG GISVGSLG + V+G+ V+NCT + T+NGVRVKT+
Sbjct: 1083 CVSIGDGSEQIDITKVNCGPGHGISVGSLGLYKNEAPVIGIRVKNCTLSDTTNGVRVKTY 1142
Query: 232 PDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK--PKDSMPNIEIGN------ 283
P S G A+ F DIVMNNV NPI+IDQ YCP+N+CN++ + + NI N
Sbjct: 1143 PSSPQGTATEMHFHDIVMNNVSNPIIIDQEYCPHNQCNLQVPSRVKLSNISFKNIRGTTS 1202
Query: 284 ---------------RNLVYNGVNVKVEGPETT--SLCSNVKPTLFGKQIPATCV 321
+ + +++K GPE T S C NV+ TL+G Q P TC
Sbjct: 1203 TELAVNLVCSKGAPCQKVELGNIDLKYTGPEGTASSQCKNVEATLWGTQQPKTCA 1257
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/259 (41%), Positives = 141/259 (54%), Gaps = 23/259 (8%)
Query: 31 DFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQ 90
D G V + S+AF ++W+ A TV+V G Y+V +F+GPC+A + F++Q
Sbjct: 654 DXGRVXQSLEGVSRAFMSAWKVACTCTD-PSTVVVXGGTYVVGPVQFQGPCRAPMGFRVQ 712
Query: 91 GLLD----------------LFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLP-TP 133
G L ID + GTF GQG TAW N C + C L
Sbjct: 713 GTLKAPTDLNRFELQDGWVIFQDIDXLIISGGGTFBGQGHTAWGQNNCARTGTCNLLLVY 772
Query: 134 IRFNFLNDSTIT-GIKSVDSRYFHINILGCYNLKLNDLKITAHADSSKDILVSEVFCGPG 192
+ N DS T GI R +NI +K D ++ D S+ I V +V CGPG
Sbjct: 773 VTINATGDSLNTDGIHM--GRSTGVNISDAI-IKTGDDSLSI-GDGSQHINVEKVTCGPG 828
Query: 193 QGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNV 252
GISVGSLGK +E VVG+TV+NCT T NG+RVKTWPDS +A++ FEDI+MNNV
Sbjct: 829 HGISVGSLGKYHNEEPVVGVTVKNCTLINTMNGIRVKTWPDSPASVATDLHFEDIIMNNV 888
Query: 253 ENPIVIDQLYCPYNKCNIK 271
NPI+I+Q YCPY++C K
Sbjct: 889 GNPILINQEYCPYDQCQAK 907
>gi|297823097|ref|XP_002879431.1| hypothetical protein ARALYDRAFT_902380 [Arabidopsis lyrata subsp.
lyrata]
gi|297325270|gb|EFH55690.1| hypothetical protein ARALYDRAFT_902380 [Arabidopsis lyrata subsp.
lyrata]
Length = 404
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 129/402 (32%), Positives = 193/402 (48%), Gaps = 87/402 (21%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK 60
LL+ SL S + + ++ +V+++GA DG D++ +F +W EA W +
Sbjct: 6 LLILCLSSLFFFLAASTKEYPSQAKIFDVRNYGAHGDGRRDNAFSFTKAWNEACQWSNGR 65
Query: 61 GTVLVPPGKYLVSFAEFEGPCKASISFQLQGLL--------------DLFS-IDTSLSLA 105
TV +PPG + + F GPCK I+F ++G L LF +D
Sbjct: 66 STVYIPPGIFYLRQVTFTGPCKNPITFIIRGTLLAPRNPYAIKQDEWILFKYVDNLTVTG 125
Query: 106 KGTFHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYN 164
G GQG +WPLN C+KN++C+ L I F F+ S I G++S++S+ H N+ +
Sbjct: 126 GGLLDGQGSYSWPLNDCNKNTNCRTLAMNIGFAFVKSSKINGLRSINSKMGHFNLFSVED 185
Query: 165 LKLNDLKITAHADS---------------------------------SKDILVSEVFCGP 191
+ + ITA DS + ++ +S+V CGP
Sbjct: 186 FNITGVTITAPGDSPNTDGIKIGKSSHMNIFNVTIGTGDDCIAILDGTSNLDISDVRCGP 245
Query: 192 GQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIA-SNFTFEDIVMN 250
G GISVGSLG+ +++ V GLTVRN T++G+R+KTW S I+ SNF +E+I M
Sbjct: 246 GHGISVGSLGRYKEEKNVQGLTVRNSIINGTTDGLRIKTWAKSVSQISVSNFLYENIQMI 305
Query: 251 NVENPIVIDQLYCPYNKCN--------IKPKDSMPN------------------------ 278
NV NPIVIDQ YCP+ +C+ ++ KD N
Sbjct: 306 NVGNPIVIDQQYCPHGQCDSPGKYASHVQIKDVKYNKIWGTSTSKEALKMQCSKAFPCQD 365
Query: 279 IEIGNRNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 320
+E+ N NL Y G + V T+LC NV ++ GK +PA C
Sbjct: 366 VELSNINLKYVGRDGLV-----TALCENVGGSIRGKIVPANC 402
>gi|34223511|gb|AAQ62998.1| oil palm polygalacturonase allergen PEST459 [Elaeis guineensis]
Length = 399
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/372 (34%), Positives = 192/372 (51%), Gaps = 80/372 (21%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCK--AS 84
NV D+GA A+GITDDSKAF +W+ A G+ + +P G YL+ +F GPCK S
Sbjct: 29 FNVLDYGARANGITDDSKAFMAAWKAACAAVGVV-KLHIPAGTYLIGPTKFAGPCKNVHS 87
Query: 85 ISFQLQGLL----------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDC 128
++ ++G L + +D + GTF GQG +WP N+C N C
Sbjct: 88 LTVNMKGYLKATTDLSQYVTGDDWVEFAWVDKLILTGGGTFDGQGAVSWPYNKCPTNKHC 147
Query: 129 Q-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD---------- 177
+ LPT ++F +++ + IKS++S++FHI ++GC N +++ITA ++
Sbjct: 148 KVLPTSVKFVATSNTLVQNIKSLNSKFFHIALVGCKNFWGKNIQITAPSNSPNTDGIHIE 207
Query: 178 -----------------------SSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTV 214
S+ +IL+S + CGPG GIS+GSLG+ + +V GL +
Sbjct: 208 RSTGVTIYNSVIGTGDDCISIGHSNSEILLSGISCGPGHGISIGSLGRYHNEGDVRGLVI 267
Query: 215 RNCTFTCTSNGVRVKTWPDS-HIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC----- 268
++ T TSNGVR+KTW +S A N TFE+IVMN+V NPI+IDQ+YCPY+ C
Sbjct: 268 KDSTLAGTSNGVRIKTWENSPGTSKAVNMTFENIVMNSVANPIIIDQMYCPYSSCASDAP 327
Query: 269 -----------NIKPKDSMP-------NIEIGNRNLVYNGVNVKVEG--PETTSLCSNVK 308
NI+ + P + + +N+ VN+K G P T S C NVK
Sbjct: 328 SGVILSDIFFRNIRGTSTTPVAVTLRCSRGVPCKNVNLQDVNLKYVGQLPATAS-CMNVK 386
Query: 309 PTLFGKQIPATC 320
+ G QIP C
Sbjct: 387 ASYSGTQIPPPC 398
>gi|15231874|ref|NP_187439.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|6648194|gb|AAF21192.1|AC013483_16 polygalacturonase (PGA3) [Arabidopsis thaliana]
gi|17529010|gb|AAL38715.1| putative polygalacturonase(PGA3 [Arabidopsis thaliana]
gi|20465449|gb|AAM20184.1| putative polygalacturonase (PGA3) [Arabidopsis thaliana]
gi|21593171|gb|AAM65120.1| polygalacturonase PGA3 [Arabidopsis thaliana]
gi|332641087|gb|AEE74608.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 391
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/397 (32%), Positives = 188/397 (47%), Gaps = 90/397 (22%)
Query: 3 LAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGT 62
+ F + FI + GI A V + +D KAF ++ + +
Sbjct: 1 MGGYFGVSTIFIICLLGISANAEVFTIGSSSG-SDITQALLKAFTSACQSSS-----PSK 54
Query: 63 VLVPPGKYLVSFAEFEGPCKASISFQLQGLLD--------------LFSIDTSLSLAKGT 108
V++P G++ + E GPCKA I LQG + +ID G
Sbjct: 55 VVIPKGEFKLGEIEMRGPCKAPIEVTLQGTVKADGNAIQGKEKWVVFGNIDGFKLNGGGA 114
Query: 109 FHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 167
F G+G AW +N CHK +C+ LP IRF+F+ +S I I S+D++ FHIN+LG N+ +
Sbjct: 115 FDGEGNAAWRVNNCHKTFECKKLPISIRFDFILNSEIRDISSIDAKNFHINVLGAKNMTM 174
Query: 168 NDLKITAHADSS---------------------------------KDILVSEVFCGPGQG 194
N++KI A DS K++ V +V CGPG G
Sbjct: 175 NNIKIVAPEDSPNTDGIHLGRSDGVKILNSFISTGDDCISVGDGMKNLHVEKVTCGPGHG 234
Query: 195 ISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIG-IASNFTFEDIVMNNVE 253
ISVGSLG+ +++V G+ V NCT T NG+R+KTWP + AS+ FEDI++ +V
Sbjct: 235 ISVGSLGRYGHEQDVSGIKVINCTLQETDNGLRIKTWPSAACSTTASDIHFEDIILKDVS 294
Query: 254 NPIVIDQLYCPYNKCNIKP--------------------KDSMP----------NIEIGN 283
NPI+IDQ YCP+N+CN + KD++ N+EIG+
Sbjct: 295 NPILIDQEYCPWNQCNKQKASTIKLVNISFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGD 354
Query: 284 RNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 320
++ YNG +GP T CSNV P + G Q P C
Sbjct: 355 IDIKYNG----ADGPATFH-CSNVSPKILGSQSPKAC 386
>gi|2982583|emb|CAA05892.1| polygalacturonase [Arabidopsis thaliana]
gi|3152948|emb|CAA06610.1| polygalacturonase [Arabidopsis thaliana]
Length = 391
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/397 (32%), Positives = 188/397 (47%), Gaps = 90/397 (22%)
Query: 3 LAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGT 62
+ F + FI + GI A V + +D KAF ++ + +
Sbjct: 1 MGGYFGVSTIFIICLLGISANAEVFTIGSSSG-SDITQALLKAFTSACQSSS-----PSK 54
Query: 63 VLVPPGKYLVSFAEFEGPCKASISFQLQGLLD--------------LFSIDTSLSLAKGT 108
V++P G++ + E GPCKA I LQG + +ID G
Sbjct: 55 VVIPKGEFKLGEIEMRGPCKAPIEVTLQGTVKADGNAIQGKEKWVVFGNIDGFKLNGGGA 114
Query: 109 FHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 167
F G+G AW +N CHK +C+ LP IRF+F+ +S I I S+D++ FHIN+LG N+ +
Sbjct: 115 FDGEGNAAWRVNNCHKTFECKKLPISIRFDFILNSEIRDISSIDAKNFHINVLGAKNMTM 174
Query: 168 NDLKITAHADSS---------------------------------KDILVSEVFCGPGQG 194
N++KI A DS K++ V +V CGPG G
Sbjct: 175 NNIKIVAPEDSPNTDGIHLGRSDGIKILNSFISTGDDCISVGDGMKNLHVEKVTCGPGHG 234
Query: 195 ISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIG-IASNFTFEDIVMNNVE 253
ISVGSLG+ +++V G+ V NCT T NG+R+KTWP + AS+ FEDI++ +V
Sbjct: 235 ISVGSLGRYGHEQDVSGIKVINCTLQETDNGLRIKTWPSAACSTTASDIHFEDIILKDVS 294
Query: 254 NPIVIDQLYCPYNKCNIKP--------------------KDSMP----------NIEIGN 283
NPI+IDQ YCP+N+CN + KD++ N+EIG+
Sbjct: 295 NPILIDQEYCPWNQCNKQKASTIKLVNISFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGD 354
Query: 284 RNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 320
++ YNG +GP T CSNV P + G Q P C
Sbjct: 355 IDIKYNG----ADGPATFH-CSNVSPKILGSQSPKAC 386
>gi|225217043|gb|ACN85327.1| polygalacturonase precursor [Oryza brachyantha]
Length = 405
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/322 (36%), Positives = 164/322 (50%), Gaps = 54/322 (16%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK 60
LLL+A L+++ ++ V +V DFGAV DG TD+SKAF +W EA G +
Sbjct: 4 LLLSAMNLLIMASWCWLQASCGRQVVFDVTDFGAVTDGETDNSKAFVRAWTEACAAAG-R 62
Query: 61 GTVLVPPGKYLVSFAEFEGPCKASISFQLQGL------LDLF----------SIDTSLSL 104
V+VP G YL+ F GPC+ + ++ G+ LD F ID L
Sbjct: 63 PAVVVPSGDYLLHPVVFRGPCRGYVEVRVAGVVRAPAGLDAFRGYHEWINFAGIDGLLVT 122
Query: 105 AKGTFHGQGETAWPLNQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCY 163
GTF G+G ++W LN C DC P+ I+ + ++TI G+ S+DS++FH+ + G +
Sbjct: 123 GNGTFDGRGASSWHLNDCPWKPDCIPPPSSIKLARVRNATIDGVTSLDSKFFHVVVAGSH 182
Query: 164 NLKLNDLKITAHADS---------------------------------SKDILVSEVFCG 190
++++ + I A DS S D+ VS V CG
Sbjct: 183 DVEIRHVSIRAPGDSPNTDGVHIQGSSNVRVTDSAVGTGDDCVSVGPGSADVTVSGVSCG 242
Query: 191 PGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTW---PDSHIGIASNFTFEDI 247
PG GISVGSLG+ + +V L V NCT T+NGVR+KTW P AS FEDI
Sbjct: 243 PGHGISVGSLGRRPGEADVRRLRVSNCTIAGTANGVRIKTWRGGPRPASSAASGLVFEDI 302
Query: 248 VMNNVENPIVIDQLYCPYNKCN 269
VM V NPI+IDQ YCPY C+
Sbjct: 303 VMRRVRNPIIIDQEYCPYISCH 324
>gi|7435385|pir||S46529 polygalacturonase (EC 3.2.1.15) precursor (clone pC27.W) - common
tobacco (fragment)
gi|1345547|emb|CAA50337.1| polygalacturonase [Nicotiana tabacum]
Length = 385
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/374 (32%), Positives = 185/374 (49%), Gaps = 90/374 (24%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
V ++ +GA ++ D S+A +++EA T+++P G + ++ + EGPCK+ +
Sbjct: 15 VFDITKYGANSNA--DISEALLNAFKEACQSTS-PSTIVIPKGTFTMNQVKLEGPCKSPL 71
Query: 86 SFQLQGLLDLFSIDTSLSLAK---------------GTFHGQGETAWPLNQCHKNSDC-Q 129
Q+Q L S + L + + G GQ AW +C ++ C +
Sbjct: 72 ELQIQATLKAPSDPSQLKVGEWLTVNKLDQFTMSGGGILDGQAAAAW---ECKQSKKCNK 128
Query: 130 LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA------------- 176
LP + FN L +STI I ++DS+ FH+N+ C NL ++A A
Sbjct: 129 LPNNLSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRFNVSAPANSPNTDGIHVSRS 188
Query: 177 --------------------DSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRN 216
D ++ + ++ V CGPG GISVGSLG ++ VVG+ VRN
Sbjct: 189 SSVNITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGISVGSLGGNPDEKPVVGVFVRN 248
Query: 217 CTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCN------- 269
CTFT T NGVR+KTWP SH G+ ++ FEDI++ NV NP+VIDQ+YCP+NKCN
Sbjct: 249 CTFTNTDNGVRIKTWPASHPGVVNDVHFEDIIVQNVSNPVVIDQVYCPFNKCNKDLPSQV 308
Query: 270 -------------IKPKDSM----------PNIEIGNRNLVYNGVNVKVEGPETTSLCSN 306
+ +D++ IE+G+ ++ Y+G EGP +S C N
Sbjct: 309 KISKVSFQNIKGTSRTQDAVSLLCSKGVPCEGIEVGDIDITYSG----KEGPAKSS-CEN 363
Query: 307 VKPTLFGKQIPATC 320
+KP+L KQ P C
Sbjct: 364 IKPSLKDKQNPPVC 377
>gi|297833572|ref|XP_002884668.1| polygalacturonase 3 [Arabidopsis lyrata subsp. lyrata]
gi|297330508|gb|EFH60927.1| polygalacturonase 3 [Arabidopsis lyrata subsp. lyrata]
Length = 391
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 129/397 (32%), Positives = 188/397 (47%), Gaps = 90/397 (22%)
Query: 3 LAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGT 62
+ A F + I + GI A V + +D KAF ++ + +
Sbjct: 1 MGAYFGVSTILIICLLGISANAEVFTIGSSSG-SDITQALLKAFTSACQSSS-----PSK 54
Query: 63 VLVPPGKYLVSFAEFEGPCKASISFQLQGLLD--------------LFSIDTSLSLAKGT 108
V++P G++ + E GPCKA I LQG + +ID G
Sbjct: 55 VVIPKGEFKLGEIEMRGPCKAPIEVTLQGTVKADGNAIQGKEKWVVFGNIDGFKLNGGGA 114
Query: 109 FHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 167
F G+G +AW +N CHK +C+ LP IRF+F+ +S I I S+D++ FHIN+LG N+ +
Sbjct: 115 FDGEGNSAWRVNNCHKTFNCKKLPISIRFDFVLNSEIRDISSIDAKNFHINVLGAKNMTM 174
Query: 168 NDLKITAH---------------------------------ADSSKDILVSEVFCGPGQG 194
+++KI A D K++ V +V CGPG G
Sbjct: 175 DNIKIIAPEESPNTDGIHLGRSDGVKILNSFISTGDDCISVGDGMKNLHVEKVTCGPGHG 234
Query: 195 ISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIG-IASNFTFEDIVMNNVE 253
ISVGSLG+ +++V G+ + NCT T NG+R+KTWP + AS+ FEDI++ NV
Sbjct: 235 ISVGSLGRYGHEQDVSGIKIINCTLQETDNGLRIKTWPSAACSTTASDIHFEDIIVKNVS 294
Query: 254 NPIVIDQLYCPYNKCNIKP--------------------KDSMP----------NIEIGN 283
NPI+IDQ YCP+N+CN + KD++ N+EIG+
Sbjct: 295 NPILIDQEYCPWNQCNKQKASTIKLVNISFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGD 354
Query: 284 RNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 320
++ YNG +GP T CSNV P L G Q P C
Sbjct: 355 IDIKYNG----ADGPATFQ-CSNVSPKLLGSQSPKAC 386
>gi|356528552|ref|XP_003532865.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 396
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 130/383 (33%), Positives = 185/383 (48%), Gaps = 87/383 (22%)
Query: 21 DATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGP 80
DA ++ NV ++GA+ADG D+S AF +W +A W+G TVL+P G Y++ F+GP
Sbjct: 10 DAHIKLFNVAEYGAIADGKEDNSVAFLKAWSDACKWNG-SATVLIPKGTYMLKSVIFKGP 68
Query: 81 CKASISFQLQGLLDLFSIDTSLSLAK----------------GTFHGQGETAWPLNQCHK 124
C SI+FQ++G+L ID SL + GT GQG +C
Sbjct: 69 CNDSITFQIKGVLKA-PIDPSLLTDQKWINFRYIDQLNVNGGGTLDGQGSAT--RRKCKN 125
Query: 125 NSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKI----------- 172
N++C+ L T + F+F+ + + + S+DS+ H + GC N+ DL +
Sbjct: 126 NANCEILFTTMDFDFITNGHVQNLHSIDSKGGHFIVFGCENMTFTDLTLKSPEHNRNTDG 185
Query: 173 ----------------------TAHADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVV 210
A +K+ +S V CGPG GISVGSLGK + +V
Sbjct: 186 IKIAQTNGINITSVKIGTGDDCVAMISGTKNAWISNVVCGPGHGISVGSLGKNDGETDVE 245
Query: 211 GLTVRNCTFTCTSNGVRVKTW--PDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
+ V+NCTF TSNG+R+KTW P ASNF +EDIVMN+V+NPIVIDQ YCP ++C
Sbjct: 246 DIVVKNCTFVGTSNGLRIKTWAAPLKKTLNASNFVYEDIVMNSVQNPIVIDQQYCPLHQC 305
Query: 269 NIKP-----------------------------KDS-MPNIEIGNRNLVYNGVNVKVEGP 298
++K KD I + N NL GV K P
Sbjct: 306 DLKEISHVQISNVTYRNIRGSSETDIAVNFNCSKDKPCQKITLDNINLWRYGVRGKGR-P 364
Query: 299 ETTSLCSNVKPTLFGKQIPATCV 321
+ C V+ +GKQ P +C+
Sbjct: 365 LLRNNCFKVEGASYGKQTPPSCI 387
>gi|357450759|ref|XP_003595656.1| Polygalactorunase PG11 [Medicago truncatula]
gi|355484704|gb|AES65907.1| Polygalactorunase PG11 [Medicago truncatula]
Length = 407
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 127/384 (33%), Positives = 182/384 (47%), Gaps = 81/384 (21%)
Query: 8 SLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPP 67
+++VSF+ + VL++ FG + +D + A +W+EA +++P
Sbjct: 6 AIIVSFLFLAEFCAVQSLVLDISKFGGAPN--SDITLALGNAWKEACA-STTASKIVIPG 62
Query: 68 GKYLVSFAEFEGPCKASISFQLQGLLDLFSIDTSLSLA----------------KGTFHG 111
G Y + E +GPCKA I Q+ G + + + + A KG F G
Sbjct: 63 GTYKMGGIELKGPCKAPIEVQVDGTIQAPADPSQIKAADQWVKFLYMEHLTLSGKGVFDG 122
Query: 112 QGETAWPLNQ-----CHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLK 166
QG TA+ Q K S+ ++ + F F+N+S +TG+ S DS+ FH+ +LGC N
Sbjct: 123 QGATAYKQAQPAAAWSGKKSNVKILMNLGFMFVNNSMVTGVTSKDSKNFHVMVLGCNNFT 182
Query: 167 LNDLKITAHADS---------------------------------SKDILVSEVFCGPGQ 193
+ +TA +DS S+ I V V CGPG
Sbjct: 183 FDGFTVTAPSDSPNTDGIHMGRSTDVKILNTNIGTGDDCVSLGDGSRKITVQGVKCGPGH 242
Query: 194 GISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIA-SNFTFEDIVMNNV 252
GISVGSLG+ ++ V G+TV+NCT T T NGVR+KTWPD+ I S+ FEDI MNNV
Sbjct: 243 GISVGSLGRYTTEDNVEGVTVKNCTLTATQNGVRIKTWPDAPGTITVSDIHFEDITMNNV 302
Query: 253 ENPIVIDQLYCPYNKCNIKPKDSMPNIEIGNRNLV-----------------------YN 289
NPI+IDQ YCP+N CN K + +I +N+ N
Sbjct: 303 TNPIIIDQEYCPWNACNKKVPSKVKLSKISFKNIQGTSGAPEGVVLVCSSAVPCDGVELN 362
Query: 290 GVNVKVEGPETTSLCSNVKPTLFG 313
V+VK G + CSNVKPT+ G
Sbjct: 363 NVDVKFNGKPAIAKCSNVKPTVTG 386
>gi|15225803|ref|NP_180874.1| glycosyl hydrolase and polygalacturonase domain-containing protein
[Arabidopsis thaliana]
gi|2924778|gb|AAC04907.1| putative polygalacturonase [Arabidopsis thaliana]
gi|330253698|gb|AEC08792.1| glycosyl hydrolase and polygalacturonase domain-containing protein
[Arabidopsis thaliana]
Length = 664
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 130/402 (32%), Positives = 195/402 (48%), Gaps = 87/402 (21%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK 60
LL+ SL S + ++ +V+++GA AD D++ AF +W EA W +
Sbjct: 6 LLILCVPSLFFFLAASTKEYPGQPKIFDVRNYGARADSQRDNAFAFTKAWNEACQWSYGR 65
Query: 61 GTVLVPPGKYLVSFAEFEGPCKASISFQLQGLL--------------DLFSIDTSLSL-A 105
TV +P G + + F GPCK+SI+F ++G L LF +L++
Sbjct: 66 STVYIPSGIFYLRQVTFSGPCKSSITFFIRGTLLAPRNPYAINQEEWILFKYVDNLTVTG 125
Query: 106 KGTFHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYN 164
G GQG +WPLN C+KN++C+ L I F F+ S I G++S++S+ H N+ +
Sbjct: 126 GGLLDGQGSYSWPLNDCNKNTNCRTLAMNIGFAFVKSSKINGLRSINSKMGHFNLFSVED 185
Query: 165 LKLNDLKITAHADS---------------------------------SKDILVSEVFCGP 191
+ + ITA DS + ++ +S+V CGP
Sbjct: 186 FNITGVTITAPGDSPNTDGIKIGKSSHMQIYNVTIGTGDDCIAILDGTSNLDISDVRCGP 245
Query: 192 GQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIA-SNFTFEDIVMN 250
G GISVGSLG+ +++ V GLTVRN T++G+R+KTW S I+ SNF +E+I M
Sbjct: 246 GHGISVGSLGRYKEEKNVQGLTVRNSIINGTTDGLRIKTWAKSVSQISVSNFLYENIQMI 305
Query: 251 NVENPIVIDQLYCPYNKC--------NIKPKDSMPN------------------------ 278
NV NPIVIDQ YCP+ +C +++ KD N
Sbjct: 306 NVGNPIVIDQQYCPHGQCDSPGKYASHVQIKDVKYNNIWGTSTSKEALKMQCSKTFPCQD 365
Query: 279 IEIGNRNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 320
+E+ N NL Y G + V T+LC NV ++ GK +PA C
Sbjct: 366 VELSNINLHYVGRDGLV-----TALCENVGGSIRGKIVPANC 402
>gi|147819171|emb|CAN69218.1| hypothetical protein VITISV_012014 [Vitis vinifera]
Length = 863
Score = 190 bits (482), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 126/379 (33%), Positives = 181/379 (47%), Gaps = 85/379 (22%)
Query: 18 RGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEF 77
RG + NV +GA G D ++AF +W A +W G K +L+P G +L+ F
Sbjct: 47 RGSIPGETIFNVLQYGAKPGGKKDSTEAFMKAWVAACHWRG-KARLLIPQGIFLIGQVTF 105
Query: 78 EGPCKA------SISFQLQGLLDLFS-----------IDTSLSLAKGTFHGQGETAWPLN 120
+GPC + ++ L+ + D+ I+ + GTF GQG+ W N
Sbjct: 106 QGPCNSPTPIIVQVAATLKAVTDISEFASPEWVTFEDINGLIVTGGGTFDGQGDVVWKYN 165
Query: 121 QCHKNSDCQL-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS- 178
C +NS+CQL PT I+FN + + + GI SV+++ FHI + C N + L ITA DS
Sbjct: 166 DCRRNSNCQLLPTSIKFNSITNGNLRGINSVNAKSFHIAMNRCQNFRAFGLXITAPEDSP 225
Query: 179 --------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKD 206
S +I +++V CGPG GIS+GSLGK +
Sbjct: 226 NTDGIHISSSNFVKVSKSIISTGDDCISIGQGSTNISINKVTCGPGHGISIGSLGKYPDE 285
Query: 207 EEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYN 266
++V+G+ V+N T T NG+R+KTWP S AS F+DI+M NV+NPI+IDQLYCP
Sbjct: 286 KDVMGIIVKNSTLMNTDNGLRIKTWPGSPPSQASGILFQDIIMKNVKNPIIIDQLYCPSG 345
Query: 267 KC----------------NIKPKDSMP--------------NIEIGNRNLVYNGVNVKVE 296
NI+ S P N+E+ + NL Y+G K
Sbjct: 346 SSCRTQPSRVRISNIHYRNIRGTSSSPLGVNLMCSPQFPCQNVELFDINLRYSG---KRR 402
Query: 297 GPETTSLCSNVKPTLFGKQ 315
TS CSNVK G++
Sbjct: 403 VSALTSSCSNVKAGFGGEE 421
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/298 (35%), Positives = 145/298 (48%), Gaps = 56/298 (18%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCK--A 83
+ +V +GAV DG T++ AF +W +A N G K T+LVP G + + F GPC+
Sbjct: 489 IFDVTMYGAVGDGKTENGMAFLAAWDDACNHPG-KSTLLVPNGTFFIGPISFIGPCQNNQ 547
Query: 84 SISFQLQGLLD--------------LFSIDTSLSLAKGT------FHGQGETAWPLNQCH 123
S +++G L +F SL L T F QGE +W C
Sbjct: 548 SPKVEIRGTLKAPSSLKAFPTPSWIMFRQLQSLILTGETTTNTSLFDAQGEESWRHADCR 607
Query: 124 KNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA--------- 174
CQ PT I + + I+ I + + FH+ I+ N+ ++ + ITA
Sbjct: 608 HKLKCQFPTSIILVNVTNGNISNITLKNGKGFHMGIINSDNVTVHGVNITAPWNSPNTDG 667
Query: 175 ---------HADSSK---------------DILVSEVFCGPGQGISVGSLGKGIKDEEVV 210
H SS +I V CGPG GISVGSLGK +++VV
Sbjct: 668 VHIGYSTNIHITSSTIGVGDDCVSIGPGSINITVFNTKCGPGHGISVGSLGKYSAEKDVV 727
Query: 211 GLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
G+ V+NCT T NGVR+KTWP S AS+F FEDIVM NV NPI+IDQ YCP++ C
Sbjct: 728 GVRVKNCTINGTQNGVRIKTWPGSPASKASSFWFEDIVMINVSNPIIIDQEYCPWSTC 785
>gi|356508460|ref|XP_003522975.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 389
Score = 190 bits (482), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 126/363 (34%), Positives = 177/363 (48%), Gaps = 79/363 (21%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREA-WNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
L++ FG + T+ +AF ++W +A + +K +++P G Y + + +GPCKA I
Sbjct: 25 LDISRFGGKPN--TNIGQAFLSAWTQACASPTAVK--IVIPAGTYQMGAVDVKGPCKAPI 80
Query: 86 SFQLQGLLDLFSIDTSLSLA----------------KGTFHGQGETAWPLNQCHKNSDCQ 129
Q+ G + + T L A KG F GQG TAW N C N DC+
Sbjct: 81 EVQVDGTIQAPANPTDLKAAHQWFVVQYVNSFTLSGKGVFDGQGATAWKQNDCTTNKDCK 140
Query: 130 -LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---------- 178
L FNFLN+S + I S DS+ FH+N+LGC N + K++A DS
Sbjct: 141 MLCMNFGFNFLNNSIVRDITSKDSKNFHVNVLGCNNFTFDGFKVSAPKDSPNTDGIHIGR 200
Query: 179 -----------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVR 215
SK+I V V CGPG GISVGSLGK +E V G V+
Sbjct: 201 STDVKILNTNIATGDDCVSLGDGSKNITVQNVNCGPGHGISVGSLGKYDSEEPVAGFLVK 260
Query: 216 NCTFTCTSNGVRVKTWPDSHIGIA-SNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK--- 271
NCT T NGVR+KTWP++ I ++ FED+ MNNV NPI+IDQ YCP+N+C+ +
Sbjct: 261 NCTLNETDNGVRIKTWPNTPGAITITDMHFEDLTMNNVTNPIIIDQEYCPWNQCSKQNPS 320
Query: 272 ----PKDSMPNIE----------------IGNRNLVYNGVNVKVEGPETTSLCSNVKPTL 311
K S NI+ + + +++ G T+ C+NVKPT+
Sbjct: 321 KIKISKVSFKNIKGTSGSQDGVVLVCSSGVPCEGVEMADIDLTFNGAAATAKCANVKPTI 380
Query: 312 FGK 314
GK
Sbjct: 381 TGK 383
>gi|388494936|gb|AFK35534.1| unknown [Medicago truncatula]
Length = 407
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/384 (33%), Positives = 183/384 (47%), Gaps = 81/384 (21%)
Query: 8 SLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPP 67
+++VSF+ + VL++ FG + +D + A +W+EA +++P
Sbjct: 6 AIIVSFLFLAEFCAVQSLVLDISKFGGAPN--SDITLALGNAWKEACA-STTASKIVIPG 62
Query: 68 GKYLVSFAEFEGPCKASISFQLQGLLDLFSIDTSLSLA----------------KGTFHG 111
G Y + E +GPCKA I Q+ G + + + + A KG F G
Sbjct: 63 GTYKMGGIELKGPCKAPIEVQVDGTIQAPADPSQIKAADQWVKFLYMEHLTLSGKGVFDG 122
Query: 112 QGETAWPLNQ-----CHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLK 166
QG TA+ Q K S+ ++ + F F+N+S +TG+ S DS+ FH+ +LGC N
Sbjct: 123 QGATAYKQAQPAAAWSGKKSNVKILMNLGFMFVNNSMVTGVTSKDSKNFHVMVLGCNNFT 182
Query: 167 LNDLKITAHADS---------------------------------SKDILVSEVFCGPGQ 193
+ +TA +DS S+ I V V CGPG
Sbjct: 183 FDGFTVTAPSDSPNTDGIHMGRSTDVKILNTNIGTGDDCVSLGDGSRKITVQGVKCGPGH 242
Query: 194 GISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIA-SNFTFEDIVMNNV 252
GISVGSLG+ ++ V G+TV++CT T T NGVR+KTWPD+ I S+ FEDI MNNV
Sbjct: 243 GISVGSLGRYTTEDNVEGVTVKSCTLTATQNGVRIKTWPDAPGTITVSDIHFEDITMNNV 302
Query: 253 ENPIVIDQLYCPYNKCNIK-------PKDSMPNIE----------------IGNRNLVYN 289
NPI+IDQ YCP+N CN K K S NI+ + + N
Sbjct: 303 TNPIIIDQEYCPWNACNKKVPSKVKLSKTSFKNIQGTSGAPEGVVLVCSSTVPCDGVELN 362
Query: 290 GVNVKVEGPETTSLCSNVKPTLFG 313
V+VK G + CSNVKPT+ G
Sbjct: 363 NVDVKFNGKPAIAKCSNVKPTVTG 386
>gi|1345546|emb|CAA50335.1| polygalacturonase [Nicotiana tabacum]
Length = 385
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/374 (31%), Positives = 184/374 (49%), Gaps = 90/374 (24%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
V ++ +GA ++ D S+A +++EA T+++P G + ++ + EGPCK+ +
Sbjct: 15 VFDITKYGANSNA--DISEALLNAFKEACQSTS-PSTIVIPKGTFTMNQVKLEGPCKSPL 71
Query: 86 SFQLQGLLDLFSIDTSLSLAK---------------GTFHGQGETAWPLNQCHKNSDC-Q 129
Q+Q L S + L + + G GQ AW +C ++ C +
Sbjct: 72 ELQIQATLKAPSDPSQLKVGEWLTVNKLDQFTMSGGGILDGQAAAAW---ECKQSKKCNK 128
Query: 130 LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA------------- 176
LP + FN L +ST+ I ++DS+ FH+N+ C NL ++A A
Sbjct: 129 LPNNLSFNSLTNSTVKDITTLDSKSFHVNVNQCKNLTFIRFNVSAPANSPNTDGIHVSRS 188
Query: 177 --------------------DSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRN 216
D ++ + ++ V CGPG GISVGSLG ++ VVG+ V N
Sbjct: 189 SSVNITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGISVGSLGGNPDEKPVVGVFVSN 248
Query: 217 CTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCN------- 269
CT T T NGVR+KTWP SH G+ ++ FEDI++ NV NP+VIDQ+YCP+NKCN
Sbjct: 249 CTVTNTDNGVRIKTWPASHPGVVNDVRFEDIIVQNVSNPVVIDQVYCPFNKCNKDLPSQV 308
Query: 270 -------------IKPKDSM----------PNIEIGNRNLVYNGVNVKVEGPETTSLCSN 306
+ +D++ IE+G+ ++ Y+G EGP +S C N
Sbjct: 309 KISKVSFQNIKGTSRTQDAVSLLCSKGVPCEGIEVGDIDITYSG----KEGPAKSS-CEN 363
Query: 307 VKPTLFGKQIPATC 320
+KP+L GKQ P C
Sbjct: 364 IKPSLKGKQNPPVC 377
>gi|356567688|ref|XP_003552049.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 389
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/362 (34%), Positives = 174/362 (48%), Gaps = 77/362 (21%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
L++ FG + T+ +AF ++W +A +++P G Y + + +GPCKA I
Sbjct: 25 LDISRFGGKPN--TNIGQAFLSAWTQACA-SPTTVKIVIPAGTYQMGAVDVKGPCKAPIE 81
Query: 87 FQLQGLLDLFSIDTSLSLA----------------KGTFHGQGETAWPLNQCHKNSDCQ- 129
Q+ G + + T L A KG F GQG TAW N C N DC+
Sbjct: 82 VQVDGTIQAPANPTDLKAAHQWFVVQYVNSFTLSGKGVFDGQGATAWKQNDCTTNKDCKM 141
Query: 130 LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSS---------- 179
L FNFLN+S + I S DS+ FH+N+LGC N + K++A DS
Sbjct: 142 LCMNFGFNFLNNSIVRDITSKDSKNFHVNVLGCNNFTFDGFKVSAPKDSPNTDGIHIGRS 201
Query: 180 -----------------------KDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRN 216
K+I V V CGPG GISVGSLGK +E V GL V+N
Sbjct: 202 TDVKILNTNIATGDDCVSLGDGCKNITVQNVNCGPGHGISVGSLGKYDAEEPVAGLLVKN 261
Query: 217 CTFTCTSNGVRVKTWPDSHIGIA-SNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK---- 271
CT T NGVR+KTWP++ I ++ FED+ MNNV NPI+IDQ YCP+N+C+ +
Sbjct: 262 CTLNGTDNGVRIKTWPNTPGAITITDMHFEDLTMNNVMNPIIIDQEYCPWNQCSKQNPSK 321
Query: 272 ---PKDSMPNIE----------------IGNRNLVYNGVNVKVEGPETTSLCSNVKPTLF 312
K S NI+ + + +++ G T+ C+NVKPT+
Sbjct: 322 IKISKVSFKNIKGTSGTKEGVVLVCSSGVPCEAVEMADIDLTFNGSAATAKCANVKPTIT 381
Query: 313 GK 314
GK
Sbjct: 382 GK 383
>gi|356516886|ref|XP_003527123.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 389
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/363 (34%), Positives = 182/363 (50%), Gaps = 79/363 (21%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREA-WNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
L++ FG + +D S+AF ++W +A + +K +++P G Y + + +GPCKA I
Sbjct: 25 LDISRFGGKPN--SDISQAFLSAWTQACASTTAVK--IVIPAGTYQMGAVDVKGPCKAPI 80
Query: 86 SFQLQG-------LLDLFSIDTSLSL---------AKGTFHGQGETAWPLNQCHKNSDCQ 129
Q+ G +++L D L + KG F GQG TAW N C N +C+
Sbjct: 81 EVQVDGTIQAPTNVVNLKGADQWLKVQHVNSFTLSGKGVFDGQGPTAWKQNDCTTNKNCK 140
Query: 130 -LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA------------ 176
L FNFLN+S + + S DS+ FH+N+LGC N+ + KI+A A
Sbjct: 141 MLCMNFGFNFLNNSIVRDLTSKDSKNFHVNVLGCNNMTFDGFKISAPAESPNTDGIHIGR 200
Query: 177 ---------------------DSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVR 215
D +K+I V V CGPG GISVGSLG+ +E V GL V+
Sbjct: 201 STDVKVLNTNIATGDDCISLGDGNKNITVQNVNCGPGHGISVGSLGRYDNEEAVEGLLVK 260
Query: 216 NCTFTCTSNGVRVKTWPDSHIGIA-SNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK--- 271
NCT T NG+R+KTWP + + I ++ FEDI M NV NP++IDQ YCP+N+C+ K
Sbjct: 261 NCTLNNTDNGLRIKTWPSTPLTITVTDMHFEDITMENVSNPVIIDQEYCPWNQCSKKNPS 320
Query: 272 ----PKDSMPNIE--IGNRNLV--------------YNGVNVKVEGPETTSLCSNVKPTL 311
K S NI+ G + V V++ G TT+ C+NVKP +
Sbjct: 321 KIKISKVSFKNIKGTSGTKEGVIFICSSVAPCEGVEMTDVDLTFNGAATTAKCANVKPVI 380
Query: 312 FGK 314
GK
Sbjct: 381 TGK 383
>gi|356508464|ref|XP_003522977.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 389
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 125/363 (34%), Positives = 176/363 (48%), Gaps = 79/363 (21%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREA-WNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
L++ FG + T+ +AF ++W +A + +K +++P G Y + + +GPCKA I
Sbjct: 25 LDISRFGGKPN--TNIGQAFLSAWTQACASPTAVK--IVIPAGTYQMGAVDVKGPCKAPI 80
Query: 86 SFQLQGLLDLFSIDTSLSLA----------------KGTFHGQGETAWPLNQCHKNSDCQ 129
Q+ G + + T L A KG F GQG TAW N C N DC+
Sbjct: 81 EVQVDGTIQAPTNPTDLKAAHQWFVVQYVNSFTLSGKGVFDGQGATAWKQNDCTTNKDCK 140
Query: 130 -LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSS--------- 179
L FNFLN+S + I S DS+ FH+N+LGC N + K++A DS
Sbjct: 141 MLCMNFGFNFLNNSIVRDITSKDSKNFHVNVLGCNNFTFDGFKVSAPKDSPNTDGIHIGR 200
Query: 180 ------------------------KDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVR 215
K+I V V CGPG GISVGSLGK +E V G V+
Sbjct: 201 STDVKILNTNIATGDDCVSLGDGCKNITVQNVNCGPGHGISVGSLGKYDSEEPVAGFLVK 260
Query: 216 NCTFTCTSNGVRVKTWPDSHIGIA-SNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK--- 271
NCT T NGVR+KTWP++ I ++ FED+ MNNV NPI+IDQ YCP+N+C+ +
Sbjct: 261 NCTLNGTDNGVRIKTWPNTPGAITITDMHFEDLTMNNVTNPIIIDQEYCPWNQCSKQNPS 320
Query: 272 ----PKDSMPNIE----------------IGNRNLVYNGVNVKVEGPETTSLCSNVKPTL 311
K S NI+ + + +++ G T+ C+NVKPT+
Sbjct: 321 KIKISKVSFKNIKGTSGSQEGVVLVCSSGVPCEGVEMADIDLTFNGAAATAKCANVKPTI 380
Query: 312 FGK 314
GK
Sbjct: 381 TGK 383
>gi|356508462|ref|XP_003522976.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 389
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 125/363 (34%), Positives = 176/363 (48%), Gaps = 79/363 (21%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREA-WNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
L++ FG + T+ +AF ++W +A + +K +++P G Y + + +GPCKA I
Sbjct: 25 LDISRFGGKPN--TNIGQAFLSAWTQACASPTAVK--IVIPAGTYQMGAVDVKGPCKAPI 80
Query: 86 SFQLQGLLDLFSIDTSLSLA----------------KGTFHGQGETAWPLNQCHKNSDCQ 129
Q+ G + + T L A KG F GQG TAW N C N DC+
Sbjct: 81 EVQVDGTIQAPANPTDLKAAHQWFVVQYVNSFTLSGKGVFDGQGATAWKQNDCTTNKDCK 140
Query: 130 -LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSS--------- 179
L FNFLN+S + I S DS+ FH+N+LGC N + K++A DS
Sbjct: 141 MLCMNFGFNFLNNSIVRDITSKDSKNFHVNVLGCNNFTFDGFKVSAPKDSPNTDGIHIGR 200
Query: 180 ------------------------KDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVR 215
K+I V V CGPG GISVGSLGK +E V G V+
Sbjct: 201 STDVKILNTNIATGDDCVSLGDGCKNITVQNVNCGPGHGISVGSLGKYDSEEPVAGFLVK 260
Query: 216 NCTFTCTSNGVRVKTWPDSHIGIA-SNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK--- 271
NCT T NGVR+KTWP++ I ++ FED+ MNNV NPI+IDQ YCP+N+C+ +
Sbjct: 261 NCTLNGTDNGVRIKTWPNTPGAITITDMHFEDLTMNNVTNPIIIDQEYCPWNQCSKQNPS 320
Query: 272 ----PKDSMPNIE----------------IGNRNLVYNGVNVKVEGPETTSLCSNVKPTL 311
K S NI+ + + +++ G T+ C+NVKPT+
Sbjct: 321 KIKISKVSFKNIKGTSGSQEGVVLVCSSGVPCEGVEMADIDLTFNGAAATAKCANVKPTI 380
Query: 312 FGK 314
GK
Sbjct: 381 TGK 383
>gi|255570465|ref|XP_002526191.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223534495|gb|EEF36195.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 392
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 129/381 (33%), Positives = 186/381 (48%), Gaps = 88/381 (23%)
Query: 9 LLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG 68
+L+SF+ ++R +V +VK FGA D SKA +W+ A + G +L+P
Sbjct: 12 VLLSFLFNIRA----EKVFDVKSFGATPSQKNDISKALLAAWKAACSTPG-ASRILIPEA 66
Query: 69 KYLVSFAEFEGPCKASISFQLQGLLDL--------------FSIDTSLSLAKGTFHGQGE 114
KY + EGPCK S+ Q++G L F L+++ G G+G+
Sbjct: 67 KYALRDVLLEGPCKGSMVLQIKGTLMAPADPSEHHSQGWITFQHVDHLTISGGNLDGRGK 126
Query: 115 TAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKIT 173
AW N C N +C+ LP +RF+F+ ++ + + S DS+ FH+N++GC N L +KI
Sbjct: 127 IAWGKNTCRTNVNCKNLPMNLRFDFVTNTIVENLTSRDSKNFHMNLIGCQNFTLQRIKII 186
Query: 174 AHADS---------------------------------SKDILVSEVFCGPGQGISVGSL 200
A DS S++I ++ V CGPG GIS+GSL
Sbjct: 187 APGDSANTDGIHIGRSNEVNIIDSKIGTGDDCISIGDGSRNIKITGVRCGPGHGISIGSL 246
Query: 201 GKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQ 260
GK +E V G+ V+ C TSNG+R+K+WP + G A++ FEDI MNNV N I+IDQ
Sbjct: 247 GKYKNEEPVSGVYVKKCDLINTSNGIRIKSWPGLYSGAATDMHFEDISMNNVSNAILIDQ 306
Query: 261 LYCPYNKC----------------NIKPKDSMPNI--------------EIGNRNLVYNG 290
+YCP+N C NIK S P I E+ N N+VY G
Sbjct: 307 MYCPWNHCNSKASSNVKISKVTFSNIKGTSSTPTIVKLLCSKGLPCEGVELNNINVVYKG 366
Query: 291 VNVKVEGPETTSLCSNVKPTL 311
+GP S C+NVKP +
Sbjct: 367 ----PDGP-AKSECTNVKPKI 382
>gi|125556041|gb|EAZ01647.1| hypothetical protein OsI_23683 [Oryza sativa Indica Group]
Length = 415
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 115/314 (36%), Positives = 157/314 (50%), Gaps = 67/314 (21%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK--------YLVS 73
A V +V+DFGAVADG TD+SKAF+ +W +A G + V+VP YL+
Sbjct: 22 ARQLVFDVRDFGAVADGQTDNSKAFERAWAKACAAPG-RAAVVVPAAGGGGGGGGGYLLH 80
Query: 74 FAEFEGPCKASISFQLQGL------LDLF----------SIDTSLSLAKGTFHGQGETAW 117
F GPCK + ++ G+ LD F ID L GTF G+G ++W
Sbjct: 81 PVVFRGPCKGFVEVRVAGVVRAPAGLDAFRGYHEWINFAGIDGLLVTGGGTFDGRGASSW 140
Query: 118 PLNQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 176
LN C DC P+ I+ + ++TITG+ S+DS++FH+ I+G ++++++ + I A
Sbjct: 141 HLNDCPWKPDCVPPPSSIKLGSVRNATITGVTSLDSKFFHVTIVGSHDVEVSHVSIRAPR 200
Query: 177 DS---------------------------------SKDILVSEVFCGPGQGISVGSLGKG 203
DS S D+ VS V CGPG GISVGSLG+
Sbjct: 201 DSPNTDGVHIQGSTGVRITDTAVATGDDCVSVGPGSADVTVSGVSCGPGHGISVGSLGRS 260
Query: 204 IKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSH--------IGIASNFTFEDIVMNNVENP 255
+ +V L V NCT T+NGVR+KTW S FEDIVM V NP
Sbjct: 261 PGEADVRRLRVSNCTIAGTANGVRIKTWRGGQRSSAAAAAAAAVSGLVFEDIVMRRVRNP 320
Query: 256 IVIDQLYCPYNKCN 269
I+IDQ YCPY C+
Sbjct: 321 IIIDQEYCPYLSCH 334
>gi|413922033|gb|AFW61965.1| hypothetical protein ZEAMMB73_966547 [Zea mays]
Length = 394
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 122/365 (33%), Positives = 183/365 (50%), Gaps = 72/365 (19%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKAS-I 85
+NVK++GA +G+ DD+K +W+ A G T++V PG Y + +F GPCKAS +
Sbjct: 29 INVKNYGAHGNGVNDDTKPLMAAWKAACGSAGAV-TMVVAPGTYYIGPVQFHGPCKASTL 87
Query: 86 SFQLQGLL----DL---------FSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LP 131
+FQLQG L DL F L++A G GQG +WP N+C DC+ LP
Sbjct: 88 TFQLQGTLKAATDLKRFGNDWIEFGWVNGLTVAGGVIDGQGAASWPFNKCPIRKDCKVLP 147
Query: 132 TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------- 178
T + F ++ + + SV+ ++FH+ +L N++++ L+I A +S
Sbjct: 148 TSVLFVNSQNTVVRDVTSVNPKFFHMALLSVKNVRMSGLRIRAPPNSPNTDGIHIERSSG 207
Query: 179 --------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCT 218
+ ++ VS V CGPG G+SVGSLG+ + +V + VR+ T
Sbjct: 208 VSIVDTHIGTGDDCISVGQGNDNVEVSRVQCGPGHGMSVGSLGRYSGEGDVTRVHVRDMT 267
Query: 219 FTCTSNGVRVKTWPDS-HIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC--------- 268
FT T+NGVR+KTW +S A++ FE++VM +V+NPI+IDQ YCPY C
Sbjct: 268 FTGTTNGVRIKTWENSPSRSNAAHMVFENMVMKDVQNPIIIDQKYCPYYNCEHKYVSGVT 327
Query: 269 -------NIKPKDSMP-----NIEIGNRNLVYNGVNVKVEGPETTSL-CSNVKPTLFGKQ 315
NIK + P + + LV V+++ +G TS C N K G Q
Sbjct: 328 LKDIHFRNIKGTATTPVAVLLRCGVPCQGLVLQDVDLRYKGQGATSAKCENAKAKYVGYQ 387
Query: 316 IPATC 320
P C
Sbjct: 388 FPKPC 392
>gi|224064464|ref|XP_002301489.1| predicted protein [Populus trichocarpa]
gi|222843215|gb|EEE80762.1| predicted protein [Populus trichocarpa]
Length = 413
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 111/301 (36%), Positives = 166/301 (55%), Gaps = 52/301 (17%)
Query: 17 VRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAE 76
+ G A V +V GA AD TD+++AF +WR A + G +++P G +L S
Sbjct: 36 IDGSGAAVTVFDVTKHGAKADDKTDNAEAFIQTWRAACD-SGAPAKMVIPGGTFLTSPVV 94
Query: 77 FEGPCKAS--ISFQLQGLLD--------------LFSIDTSLSL-AKGTFHGQGETAWPL 119
F+GPCK++ I F++QG + LF I L+L GTF GQG W
Sbjct: 95 FQGPCKSTEPIVFEVQGNVKATTDLSEYSSEQWILFEIIDGLTLNGGGTFDGQGSAVWKY 154
Query: 120 NQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS 178
N CH+N +CQ LP+ I+ + + ++ + I SVDS+YFH+++ C ++ ++++ +TA A+S
Sbjct: 155 NDCHQNKECQPLPSSIKLSKVKNAFVHEISSVDSKYFHMHVTSCNSISIHNINLTAPANS 214
Query: 179 ---------------------------------SKDILVSEVFCGPGQGISVGSLGKGIK 205
S +IL+S+VFCGPG G+SVGSLGK
Sbjct: 215 PNTDGIHISHSDGVHVTSSKIGTGDDCISIGQGSTNILISQVFCGPGHGLSVGSLGKYKN 274
Query: 206 DEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPY 265
+E+V G+ V NCT T+NGVR+K++ S A N TF+DI M++V+NPI+IDQ Y
Sbjct: 275 EEDVRGIVVTNCTLFNTTNGVRIKSYAASDPSQALNITFKDITMDSVKNPIIIDQKYGSR 334
Query: 266 N 266
N
Sbjct: 335 N 335
>gi|61393763|gb|AAX45476.1| polygalacturonase [Lilium longiflorum]
gi|73913442|gb|AAZ91659.1| polygalacturonase [Lilium longiflorum]
Length = 413
Score = 187 bits (474), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 111/295 (37%), Positives = 150/295 (50%), Gaps = 50/295 (16%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
+NVK FGAV DG TD ++A +W +A N G K V+VP G YL F GPC IS
Sbjct: 31 VNVKSFGAVGDGKTDSTQAILRAWDQACNGFG-KQRVIVPEGVYLTGPMAFRGPCNGFIS 89
Query: 87 FQLQGLLDLFS---------------IDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQL- 130
Q++G L + ++ L G F+ QG AW N C +C L
Sbjct: 90 MQVRGELRAYGDVGKYPNAKWVSYEDLNGLLVTGGGRFNAQGSQAWTQNDCSTKKNCALL 149
Query: 131 PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------ 178
T ++F+ ++TI I S+DS++FHI I C ++ ++ + ITA S
Sbjct: 150 TTSVKFDHCTNATIRRINSIDSKFFHIAIDQCTDITVHHINITAPGTSPNTDGIHIGRST 209
Query: 179 ---------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNC 217
S I +S+V CGPG GISVGSLG+ + +E V + V+NC
Sbjct: 210 NVNISNAIIGTGDDCISLGPGSSHITISKVQCGPGHGISVGSLGRYMNEENVWDVKVKNC 269
Query: 218 TFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKP 272
T T T+NGVR+KTW S AS F F+DI M V+NPI+IDQ YC Y+ C P
Sbjct: 270 TLTGTTNGVRIKTWKGSSPSEASQFIFQDIEMREVQNPIIIDQEYCSYDYCANNP 324
>gi|115468922|ref|NP_001058060.1| Os06g0611400 [Oryza sativa Japonica Group]
gi|51090901|dbj|BAD35506.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|51091973|dbj|BAD35502.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113596100|dbj|BAF19974.1| Os06g0611400 [Oryza sativa Japonica Group]
Length = 419
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/314 (36%), Positives = 157/314 (50%), Gaps = 67/314 (21%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK--------YLVS 73
A V +V+DFGAVADG TD+SKAF+ +W +A G + V+VP YL+
Sbjct: 26 ARQLVFDVRDFGAVADGQTDNSKAFERAWAKACAAPG-RAAVVVPAAGGGGGGGGGYLLH 84
Query: 74 FAEFEGPCKASISFQLQGL------LDLF----------SIDTSLSLAKGTFHGQGETAW 117
F GPCK + ++ G+ LD F ID L GTF G+G ++W
Sbjct: 85 PVVFRGPCKGFVEVRVAGVVRAPAGLDAFRGYHEWINFAGIDGLLVTGGGTFDGRGASSW 144
Query: 118 PLNQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 176
LN C DC P+ I+ + ++TITG+ S+DS++FH+ I+G ++++++ + I A
Sbjct: 145 HLNDCPWKPDCVPPPSSIKLGSVRNATITGVTSLDSKFFHVTIVGSHDVEVSHVSIRAPR 204
Query: 177 DS---------------------------------SKDILVSEVFCGPGQGISVGSLGKG 203
DS S D+ VS V CGPG GISVGSLG+
Sbjct: 205 DSPNTDGVHIQGSTGVRITDTAVATGDDCVSVGPGSADVTVSGVSCGPGHGISVGSLGRS 264
Query: 204 IKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSH--------IGIASNFTFEDIVMNNVENP 255
+ +V L V NCT T+NGVR+KTW S FEDIVM V NP
Sbjct: 265 PGEADVRRLRVSNCTIAGTANGVRIKTWRGGQRSSAAAAAAAAVSGLVFEDIVMRRVRNP 324
Query: 256 IVIDQLYCPYNKCN 269
I+IDQ YCPY C+
Sbjct: 325 IIIDQEYCPYLSCH 338
>gi|225437430|ref|XP_002268540.1| PREDICTED: exopolygalacturonase clone GBGE184-like [Vitis vinifera]
Length = 411
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 127/378 (33%), Positives = 180/378 (47%), Gaps = 82/378 (21%)
Query: 21 DATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGP 80
D V +V +GAVADG TD+ + + A +W G TVL+P GK+LV A FEGP
Sbjct: 39 DTGATVFDVTKYGAVADGKTDNVEVLNA----ACHWRGTS-TVLIPEGKFLVGQATFEGP 93
Query: 81 CKAS--ISFQLQGL---------------LDLFSIDTSLSLAKGTFHGQGETAWPLNQCH 123
C + I F+ +G L ++ + GTF GQG AW N CH
Sbjct: 94 CNSPNPIVFEARGTVLAQPDLSEYPSPEWLMFEDVNQLILKGGGTFDGQGVFAWKYNDCH 153
Query: 124 KNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---- 178
+N+DCQ LPT ++FN +N+S + I S+DS+ FH I YN +L ITA +S
Sbjct: 154 QNADCQMLPTNLKFNKVNNSVVQDITSLDSKSFHYFITNSYNFTAFNLTITAPGNSPNTD 213
Query: 179 -----------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEV 209
S +I ++ V+CGPG G+S+GSLGK +++V
Sbjct: 214 GMHLSRCDLVNLSNFTIKTGDDCISVGQGSTNINITNVYCGPGHGLSIGSLGKYPNEKDV 273
Query: 210 VGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPY--NK 267
VG+ V NCT T+NG R+KTWP S AS+ F+DIVMN+V+NPI+IDQ Y +
Sbjct: 274 VGIHVTNCTLNGTTNGARIKTWPGSPPSQASSIIFQDIVMNSVKNPILIDQKYGSHTGKP 333
Query: 268 CNIKPKDSM------------------------PNIEIGNRNLVYNGVNVKVEGPETTSL 303
+K D + +++ + + YNG E +S
Sbjct: 334 SRVKVSDVLYKNLRGTTISKVAVSLVCSELVPCNGLQLEDIDFTYNGPATFKENLPFSST 393
Query: 304 CSNVKPTLFGKQIPATCV 321
C + + GKQ P C
Sbjct: 394 CLHANASYVGKQNPPACA 411
>gi|125597839|gb|EAZ37619.1| hypothetical protein OsJ_21954 [Oryza sativa Japonica Group]
Length = 415
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/314 (36%), Positives = 157/314 (50%), Gaps = 67/314 (21%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK--------YLVS 73
A V +V+DFGAVADG TD+SKAF+ +W +A G + V+VP YL+
Sbjct: 22 ARQLVFDVRDFGAVADGQTDNSKAFERAWAKACAAPG-RAAVVVPAAGGGGGGGGGYLLH 80
Query: 74 FAEFEGPCKASISFQLQGL------LDLF----------SIDTSLSLAKGTFHGQGETAW 117
F GPCK + ++ G+ LD F ID L GTF G+G ++W
Sbjct: 81 PVVFRGPCKGFVEVRVAGVVRAPAGLDAFRGYHEWINFAGIDGLLVTGGGTFDGRGASSW 140
Query: 118 PLNQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 176
LN C DC P+ I+ + ++TITG+ S+DS++FH+ I+G ++++++ + I A
Sbjct: 141 HLNDCPWKPDCVPPPSSIKLGSVRNATITGVTSLDSKFFHVTIVGSHDVEVSHVSIRAPR 200
Query: 177 DS---------------------------------SKDILVSEVFCGPGQGISVGSLGKG 203
DS S D+ VS V CGPG GISVGSLG+
Sbjct: 201 DSPNTDGVHIQGSTGVRITDTAVATGDDCVSVGPGSADVTVSGVSCGPGHGISVGSLGRS 260
Query: 204 IKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSH--------IGIASNFTFEDIVMNNVENP 255
+ +V L V NCT T+NGVR+KTW S FEDIVM V NP
Sbjct: 261 PGEADVRRLRVSNCTIAGTANGVRIKTWRGGQRSSAVAAAAAAVSGLVFEDIVMRRVRNP 320
Query: 256 IVIDQLYCPYNKCN 269
I+IDQ YCPY C+
Sbjct: 321 IIIDQEYCPYLSCH 334
>gi|15231876|ref|NP_187440.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|6648195|gb|AAF21193.1|AC013483_17 putative polygalacturonase [Arabidopsis thaliana]
gi|332641088|gb|AEE74609.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 397
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/337 (34%), Positives = 166/337 (49%), Gaps = 84/337 (24%)
Query: 63 VLVPPGKYLVSFAEFEGPCKASISFQLQG--LLDLFSI------------DTSLSLAKGT 108
V++P G++ + GPCK+ + L G L D SI D GT
Sbjct: 56 VVIPKGQFKLGEIMMSGPCKSPVEITLLGTVLADGNSIHGKEKWVVFQRMDGFRLNGGGT 115
Query: 109 FHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 167
F G+G AW +N CHK +C+ LP IRF+F+ ++ I I S+D++ FHIN++G N+
Sbjct: 116 FDGEGNAAWRVNNCHKTFECKKLPISIRFDFVTNAEIRDISSIDAKNFHINVIGAKNMTF 175
Query: 168 NDLKITAHADSSK---------------------------------DILVSEVFCGPGQG 194
+++KI A A+S ++LV V CGPG G
Sbjct: 176 DNVKIMAPAESPNTDGIHLGRSVGVSIINSRISTGDDCVSVGDGMVNLLVKNVVCGPGHG 235
Query: 195 ISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIG-IASNFTFEDIVMNNVE 253
ISVGSLG+ +++V G+ V NCT T NG+R+KTWP + ASN FE+I++ NV
Sbjct: 236 ISVGSLGRYGHEQDVSGIRVINCTLQETDNGLRIKTWPSAACSTTASNIHFENIILRNVS 295
Query: 254 NPIVIDQLYCPYNKCNIKPKDSM------------------------------PNIEIGN 283
NPI+IDQ YCP+N+CN + S+ N+++G+
Sbjct: 296 NPILIDQEYCPWNQCNKQKSSSIKLANISFRRIRGTSGNKDAVKLLCSKGYPCENVQVGD 355
Query: 284 RNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 320
N+ Y G +GP T +CSNV+P L G Q P C
Sbjct: 356 INIQYTG----ADGP-ATFMCSNVRPKLVGTQFPKAC 387
>gi|242078937|ref|XP_002444237.1| hypothetical protein SORBIDRAFT_07g016970 [Sorghum bicolor]
gi|241940587|gb|EES13732.1| hypothetical protein SORBIDRAFT_07g016970 [Sorghum bicolor]
Length = 391
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 119/367 (32%), Positives = 185/367 (50%), Gaps = 73/367 (19%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKAS- 84
V+NVK++GA +G DDSK +W+ A G T++V PG Y + +F GPCKAS
Sbjct: 25 VINVKNYGAHGNGANDDSKPLMAAWKAACGSAGAV-TMVVTPGTYYIGPVQFHGPCKASS 83
Query: 85 ISFQLQGLLDLFSIDTS--------------LSLAKGTFHGQGETAWPLNQCHKNSDCQ- 129
++FQLQG + D S L++ GT GQG +WP N+C DC+
Sbjct: 84 LTFQLQGSTLKAATDLSKFGNDWIEFGWVNGLTVTGGTIDGQGAASWPFNKCPVRKDCKV 143
Query: 130 LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----------- 178
LPT + F ++ + + SV+ ++FH+ +L N++++ LKI+A ++S
Sbjct: 144 LPTSVLFVNNQNTVVRDVTSVNPKFFHMALLTVKNIRMSGLKISAPSNSPNTDGIHIERS 203
Query: 179 ----------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRN 216
+ ++ ++ V CGPG G+SVGSLG+ + +V + VR+
Sbjct: 204 SGIQITDTRISTGDDCISIGQGNDNVQIARVQCGPGHGMSVGSLGRYASEGDVTRVHVRD 263
Query: 217 CTFTCTSNGVRVKTWPDS-HIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKD- 274
TFT T+NGVR+KTW +S A++ FE++VM +V+NPI+IDQ YCPY C K
Sbjct: 264 MTFTGTTNGVRIKTWENSPSKSHAAHMVFENMVMKDVQNPIIIDQKYCPYYNCEHKYVSG 323
Query: 275 -SMPNIEIGN-------------------RNLVYNGVNVKVEGP-ETTSLCSNVKPTLFG 313
++ +I+ N + LV V+++ +G T + C N K G
Sbjct: 324 VTIQDIQFKNIKGTAATQVAVLLRCGVPCQGLVLQDVDLRYKGQGGTLAKCENAKAKYVG 383
Query: 314 KQIPATC 320
Q P C
Sbjct: 384 NQFPKPC 390
>gi|359485805|ref|XP_003633338.1| PREDICTED: LOW QUALITY PROTEIN: exopolygalacturonase-like [Vitis
vinifera]
Length = 345
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 114/317 (35%), Positives = 167/317 (52%), Gaps = 57/317 (17%)
Query: 43 SKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLLD-------- 94
++AF ++W+ A TV+V G Y+V +F+GPC+A + F++QG L
Sbjct: 24 TQAFMSAWKVACTCTD-PSTVVVSGGTYVVGPVQFQGPCRAPMGFRVQGTLKAPTDLNRF 82
Query: 95 -------LFS-IDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTIT 145
+F ID+ + GTF GQG TAW N C + C L + F + +S I
Sbjct: 83 ELQDGWVIFQDIDSLIISGGGTFDGQGHTAWGQNNCARTGTCNLLLVNLCFTKVTNSIIX 142
Query: 146 GIKSVDSRYFHINILGCYNLKLNDLKITAHADS--------------------------- 178
S++S+ FH++IL C+N+ L + I A DS
Sbjct: 143 NTTSLNSKLFHMDILNCWNMTLQYVTINATGDSLNTDGIHMGRSTGVNISDAIIKTGDDS 202
Query: 179 ------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWP 232
S+ I V +V CGPG GISVGSLGK +E VVG+TV+NCT T NG+RVKTWP
Sbjct: 203 LSIGDGSQHINVEKVTCGPGHGISVGSLGKYHNEEPVVGVTVKNCTLINTMNGIRVKTWP 262
Query: 233 DSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNIEIGNRNLVYNGVN 292
DS +A++ FEDI+MNNV NPI+I+Q YCPY++C K +P+ ++ ++ + G+
Sbjct: 263 DSPASVATDLHFEDIIMNNVGNPILINQEYCPYDQCQAK----VPS-QVKISDVSFQGI- 316
Query: 293 VKVEGPETTSLCSNVKP 309
+ G + +CS P
Sbjct: 317 CSMSGTQVAVVCSRGVP 333
>gi|356551848|ref|XP_003544285.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 386
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 120/379 (31%), Positives = 182/379 (48%), Gaps = 91/379 (24%)
Query: 20 IDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEG 79
+ A + +++ +G V +G D + A +WR+A V++P KY + +F G
Sbjct: 14 VKAQASLFDIRKYGVVPNG--DITMALQKAWRDAC-VSTTPSKVVIPSNKYKLRQIDFMG 70
Query: 80 PCKASISFQLQGLLDL---------------FSIDTSLSLA-KGTFHGQGETAWPLNQCH 123
PCKA I + G++ F L+L+ GTFHG+G+ AW N C
Sbjct: 71 PCKAPIEILVNGIIKAPKNPFDVSGQNQWVRFGYINFLTLSGNGTFHGRGKMAWKQNNCS 130
Query: 124 KNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA------ 176
N +C+ L F F+N+S I I S DS+YFH+N+ GC N+ + ++++ A
Sbjct: 131 TNKNCKKLAMNFGFGFVNNSVIHDITSKDSKYFHVNVFGCKNISFTNFRVSSPAYSPNTD 190
Query: 177 ---------------------------DSSKDILVSEVFCGPGQGISVGSLGKGIKDEEV 209
D SK++ + V CGPG GISVGSLGK ++ V
Sbjct: 191 GIHIGKSTQVKITNSKIDTGDDCISLGDGSKEVTILNVTCGPGHGISVGSLGKYSNEDSV 250
Query: 210 VGLTVRNCTFTCTSNGVRVKTWPDSH-IGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
+ V+NCT T+NG+R+KTWP + I +AS+ FEDI M NV NPI+IDQ YCP+N+C
Sbjct: 251 EDVIVKNCTLKNTNNGLRIKTWPGTAIISLASDLHFEDITMINVSNPIIIDQEYCPWNQC 310
Query: 269 ----------------NIKPKDSM--------------PNIEIGNRNLVYNGVNVKVEGP 298
NI+ + +E+ + NL +NG +
Sbjct: 311 SKQSPSKIKISKVTFKNIRGTSATQEGITLVCSSGIPCETVELSDINLRFNGTTL----- 365
Query: 299 ETTSLCSNVKPTLFGKQIP 317
T+ C+NVKP + G++ P
Sbjct: 366 -VTAKCANVKPKI-GRKAP 382
>gi|356499491|ref|XP_003518573.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 391
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 120/370 (32%), Positives = 169/370 (45%), Gaps = 83/370 (22%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
+++K FG + D D ++AF +W+ A +L+P G Y + + +GPC A I
Sbjct: 27 IDIKKFGGIPDA--DITQAFTDAWKVACASTS-ASKILIPNGTYKMKAVDVKGPCMAPIE 83
Query: 87 FQLQGLLDLFSIDTSLSLAK----------------GTFHGQGETAWPLNQCHKNSDCQL 130
Q+ G + + +L AK G F GQG AW N C N++C++
Sbjct: 84 IQIDGTIQAPADPNALDGAKQWVKIGYANFITLSGKGIFDGQGAIAWKQNDCRTNTNCKI 143
Query: 131 PTP-IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH-------------- 175
P+ FNF+N S + GI S DS+ FH+ + GCYN + I+A
Sbjct: 144 PSMNFGFNFVNHSMVRGITSKDSKSFHVILFGCYNFTFDGFHISAPETSINTDGIHIGKS 203
Query: 176 -------------------ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRN 216
D S + V V CGPG GISVGSLGK +E V L V+N
Sbjct: 204 TDVKILNTNIATGDDCVSLGDGSIHVTVQNVNCGPGHGISVGSLGKYTNEEPVKDLLVKN 263
Query: 217 CTFTCTSNGVRVKTWPD-SHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDS 275
CT T T NGVR+KTWP+ S + ++ FEDI M +V NP++IDQ YCP+N C PK S
Sbjct: 264 CTLTNTENGVRIKTWPNSSQTYLVTDMHFEDITMVDVLNPVIIDQEYCPWNHC---PKQS 320
Query: 276 MPNIEIGN--------------------------RNLVYNGVNVKVEGPETTSLCSNVKP 309
I+I ++ N V + +G + C+NV+P
Sbjct: 321 PSKIKIRKVSFSDIKGTSKSKEGVIFICSKAVPCEDVELNNVALTFKGDPIVAKCANVRP 380
Query: 310 TLFGKQIPAT 319
GK P T
Sbjct: 381 KFAGKAPPCT 390
>gi|449502537|ref|XP_004161670.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 453
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 178/372 (47%), Gaps = 78/372 (20%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKA-S 84
V +V GA ADG TDD++AF T+W A L+P +LV F GPCK+
Sbjct: 83 VFDVTKHGAKADGKTDDAQAFMTTWIAACRNTVGPTKFLIPQRTFLVGPVTFAGPCKSFP 142
Query: 85 ISFQLQGLL------------DLFSID--TSLSL-AKGTFHGQGETAWPLNQCHKNSDCQ 129
I+ + QG + + FSI+ T L G F GQG + WP N C KN+ CQ
Sbjct: 143 ITLENQGTVKATIDISAYSSPEWFSIEDITGFILTGSGVFDGQGLSVWPYNDCKKNNLCQ 202
Query: 130 -LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADS 178
LP I+F LN + + G+ S++S FH ++ CYN ++KI A H +
Sbjct: 203 ILPISIKFTRLNHTIVDGLTSINSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLST 262
Query: 179 SK-----------------------DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVR 215
SK +I V+ V CGPG G+SVGSLGK K++ V + V+
Sbjct: 263 SKLVTIANSVIGTGDDCVSIGHSTENITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVK 322
Query: 216 NCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK-------C 268
NCT +NG R+KTW G+AS FEDIVMNNV+NPI+IDQ Y K
Sbjct: 323 NCTIFNATNGARIKTWASPISGLASRIIFEDIVMNNVKNPIIIDQTYGTKKKKESNWKVS 382
Query: 269 NIKPKD----SMPN---------------IEIGNRNLVYNGVNVKVEGPETTSLCSNVKP 309
N++ K+ S N +E+ + NL Y G N++ S CSN K
Sbjct: 383 NVQFKNIRGTSTTNVAVLLECSKLFPCEGVELRDINLSYGGTNLR--NTTIVSSCSNAKI 440
Query: 310 TLFGKQIPATCV 321
FG Q P CV
Sbjct: 441 ATFGVQNPPPCV 452
>gi|449520239|ref|XP_004167141.1| PREDICTED: exopolygalacturonase clone GBGE184-like [Cucumis
sativus]
Length = 453
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 178/372 (47%), Gaps = 78/372 (20%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKA-S 84
V +V GA A+G TDD++AF T+W A L+P G +LV F GPCK+
Sbjct: 83 VFDVTKHGAKANGKTDDAQAFMTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFP 142
Query: 85 ISFQLQGLL------------DLFSID--TSLSL-AKGTFHGQGETAWPLNQCHKNSDCQ 129
I+ + QG + + FSI+ T L G F GQG + WP N C KN+ CQ
Sbjct: 143 ITLENQGTVKATTDISAYSSPEWFSIEDITGFILTGSGVFDGQGLSVWPYNDCKKNNLCQ 202
Query: 130 L-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADS 178
L P I+F LN + + G+ SV+S FH ++ CYN ++KI A H +
Sbjct: 203 LLPISIKFTRLNHTIVDGLTSVNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLST 262
Query: 179 SK-----------------------DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVR 215
SK +I V+ V CGPG G+SVGSLGK K++ V + V+
Sbjct: 263 SKLVTIANSVIGTGDDCVSIGHSAENITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVK 322
Query: 216 NCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK-------C 268
NCT +NG R+KTW G+AS FEDIVM NV+NPI+IDQ Y K
Sbjct: 323 NCTIFNATNGARIKTWASPVSGLASRIIFEDIVMYNVKNPIIIDQTYGTKKKKESNWKVS 382
Query: 269 NIKPKD----SMPN---------------IEIGNRNLVYNGVNVKVEGPETTSLCSNVKP 309
N++ K+ S N +E+ + NL Y G N++ S CSN K
Sbjct: 383 NVQFKNIRGTSTTNVAVLLECSKLFPCEGVELRDINLSYGGTNLR--NTTIVSSCSNAKI 440
Query: 310 TLFGKQIPATCV 321
FG Q P CV
Sbjct: 441 ATFGVQNPPPCV 452
>gi|548490|sp|P35337.1|PGLR_BRANA RecName: Full=Polygalacturonase; Short=PG; AltName: Full=Pectinase;
Flags: Precursor
gi|304223|gb|AAA70402.1| polygalacturonase [Brassica napus]
Length = 397
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 117/338 (34%), Positives = 169/338 (50%), Gaps = 84/338 (24%)
Query: 63 VLVPPGKYLVSFAEFEGPCKASISFQLQGLLD-------------LFSIDTSLSL-AKGT 108
VL+P G + + GPCK+ I F LQG + +F L GT
Sbjct: 55 VLIPKGDFKLGETVMTGPCKSPIEFTLQGNVKTDGGSTQGKDRWVVFEKINGFKLNGGGT 114
Query: 109 FHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 167
F G+G AW N CHK +C+ LP +RF+F++++ I + S+D++ FH N++ N+
Sbjct: 115 FDGEGNAAWKANNCHKTFECKKLPISVRFDFVDNAEIKDVTSLDAKNFHFNVISGKNMTF 174
Query: 168 NDLKITAHADSS---------------------------------KDILVSEVFCGPGQG 194
+++KI A A+S K++L+ +V CGPG G
Sbjct: 175 DNIKIIAPAESPNTDGIHLGRCEGVKILNTKIATGDDCISVGDGMKNLLIEKVVCGPGHG 234
Query: 195 ISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSH-IGIASNFTFEDIVMNNVE 253
ISVGSLG+ +++V +TV+NCT TSNG+R+KTWP + A+ FEDI++N V
Sbjct: 235 ISVGSLGRYGWEQDVTDITVKNCTLEGTSNGLRIKTWPSAACTTTAAGIHFEDIILNKVS 294
Query: 254 NPIVIDQLYCPYNKCNI-KP-------------------KDSM----------PNIEIGN 283
NPI+IDQ YCP+N+CN KP KD++ N+EIG+
Sbjct: 295 NPILIDQEYCPWNQCNKNKPSTIKLVDITFRNIRGTSENKDAVKLLCSKGHPCENVEIGD 354
Query: 284 RNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 321
N+ Y G +GP T C+NV P L G Q P CV
Sbjct: 355 INIEYTG----PDGPPTFE-CTNVTPKLVGAQNPKACV 387
>gi|297852118|ref|XP_002893940.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339782|gb|EFH70199.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 404
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 127/405 (31%), Positives = 194/405 (47%), Gaps = 89/405 (21%)
Query: 2 LLAARFSLL---VSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDG 58
+A+ F L + F+ + + +V NV+ G+ DG TD++ AF + W+ A
Sbjct: 3 FIASAFKALCLSLLFVVAASRLTMRPKVFNVRRHGSKPDGKTDNANAFTSVWKRACTRIS 62
Query: 59 IKGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLL-------DL-------FSIDTSLSL 104
+ VP G + + EF GPCK I F + G L D+ F +LS+
Sbjct: 63 GSSKIYVPKGTFYLGGVEFVGPCKNPIEFVIDGTLLAPANPRDIKLDTWINFRYINNLSI 122
Query: 105 A-KGTFHGQGETAWPLNQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGC 162
+ GT GQG+ +WPLN CHKN++C +L + F F+N+S I I S++S+ H N
Sbjct: 123 SGSGTLDGQGKHSWPLNDCHKNTNCPKLAMTMGFAFVNNSRIKDITSLNSKMGHFNFFSV 182
Query: 163 YNLKLNDLKITAHADS---------------------------------SKDILVSEVFC 189
++ + + ITA DS + ++ +S V C
Sbjct: 183 HHFNITGITITAPGDSPNTDGIKMGSCSNIHISNTHIGTGDDCIAILSGTTNLDISNVEC 242
Query: 190 GPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGI-ASNFTFEDIV 248
GPG GISVGSLGK +++V LTVR+ F TS+G+R+KTW S I SNF +E+I
Sbjct: 243 GPGHGISVGSLGKNKDEKDVKDLTVRDTVFNGTSDGIRIKTWESSASKILVSNFVYENIQ 302
Query: 249 MNNVENPIVIDQLYCPYNKC------------------------------NIKPKDSMP- 277
M +V PI IDQ YCP+ C N++ S P
Sbjct: 303 MIDVGKPINIDQKYCPHPPCEHEQKGESHVQIQDIKLKNIYGTSKNKVAVNLQCSKSFPC 362
Query: 278 -NIEIGNRNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 321
N+E+ + NL +NG+ +GP +T++C N+ ++ GK +P C+
Sbjct: 363 KNVELIDINLKHNGLE---DGP-STAVCENINGSIRGKMVPQHCL 403
>gi|3024387|sp|Q40312.1|PGLR_MEDSA RecName: Full=Polygalacturonase; Short=PG; AltName: Full=Pectinase;
Flags: Precursor
gi|668998|gb|AAA62286.1| polygalacturonase [Medicago sativa]
Length = 421
Score = 183 bits (464), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 127/385 (32%), Positives = 185/385 (48%), Gaps = 83/385 (21%)
Query: 8 SLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPP 67
+++VSF+ A + VL++ FG + +D +A ++W EA +++P
Sbjct: 6 AIIVSFLFIADFCAAQSGVLDISKFGGKPN--SDIGQALTSAWNEACA-STTAAKIVIPA 62
Query: 68 GKYLVSFAEFEGPCKASISFQLQGLLD-----------------LFSIDTSLSLAKGTFH 110
G Y ++ E +GPCKA I Q+ G + L+ +LS KG F
Sbjct: 63 GTYQLNGIELKGPCKAPIELQVDGTIQAPADPSVIKGTEQWFKFLYMDHLTLS-GKGVFD 121
Query: 111 GQGETAW----PLNQ-CHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNL 165
GQG T + P + KNS+ ++ FNF+N+S + G+ S DS+ FH+ + GC N+
Sbjct: 122 GQGATVYKKAAPASAWSGKNSNSKVFMNFGFNFVNNSIVRGVTSKDSKNFHVMVFGCKNI 181
Query: 166 KLNDLKITAHADS---------------------------------SKDILVSEVFCGPG 192
+ ITA DS SK I V V CGPG
Sbjct: 182 TFDGFTITAPGDSPNTDGIHMGKSTDVKILNTNIGTGDDCVSIGDGSKQITVQGVNCGPG 241
Query: 193 QGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIA-SNFTFEDIVMNN 251
G+SVGSLGK +E V G+TV+NCT T T NGVR+KTWPD+ I S+ FEDI M N
Sbjct: 242 HGLSVGSLGKFTTEENVEGITVKNCTLTATDNGVRIKTWPDAPGTITVSDIHFEDITMTN 301
Query: 252 VENPIVIDQLYCPYNKCNIKPKDSMPNIEIGNRNLV-----------------------Y 288
V+NP++IDQ Y P+N+C+ K + +I +N+
Sbjct: 302 VKNPVIIDQEYYPWNQCSKKNPSKIKLSKISFKNVKGTSGTAEGVVLICSSAVPCDGVEL 361
Query: 289 NGVNVKVEGPETTSLCSNVKPTLFG 313
N V++K G TT+ C+NVKP + G
Sbjct: 362 NNVDLKFNGAPTTAKCTNVKPLVTG 386
>gi|297833574|ref|XP_002884669.1| hypothetical protein ARALYDRAFT_478121 [Arabidopsis lyrata subsp.
lyrata]
gi|297330509|gb|EFH60928.1| hypothetical protein ARALYDRAFT_478121 [Arabidopsis lyrata subsp.
lyrata]
Length = 397
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/338 (34%), Positives = 166/338 (49%), Gaps = 85/338 (25%)
Query: 63 VLVPPGKYLVSFAEFEGPCKASISFQLQG--LLDLFSI------------DTSLSLAKGT 108
V++P G++ + GPCK+ + L G L D SI D GT
Sbjct: 55 VVIPKGQFRLGEIMMSGPCKSPVEITLLGTVLADGNSIHGKEKWVVFQRMDGFRLNGGGT 114
Query: 109 FHGQGETAWPLNQCHKNSDCQ-LP-TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLK 166
F G+G AW +N CHK +C+ LP IRF+F+ ++ I I S+D++ FHIN++G N+
Sbjct: 115 FDGEGNAAWRVNNCHKTFECKKLPIVSIRFDFVTNAEIRDISSIDAKNFHINVIGAKNMT 174
Query: 167 LNDLKITAHADSSK---------------------------------DILVSEVFCGPGQ 193
N++KI A A+S ++LV V CGPG
Sbjct: 175 FNNVKIMAPAESPNTDGIHLGRSVGVSIINSRIATGDDCVSVGDGMVNLLVKNVVCGPGH 234
Query: 194 GISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIG-IASNFTFEDIVMNNV 252
GISVGSLG+ +++V G+ V NCT T NG+R+KTWP + ASN FE+I++ NV
Sbjct: 235 GISVGSLGRYGHEQDVSGIRVINCTLQETDNGLRIKTWPSAACSTTASNIHFENIILRNV 294
Query: 253 ENPIVIDQLYCPYNKCNIKPKDSM------------------------------PNIEIG 282
NPI+IDQ YCP+N+CN + S+ N+++G
Sbjct: 295 SNPILIDQEYCPWNQCNKQKSSSIKLANISFKRIRGTSGNKDAVKLLCSKGYPCENVQVG 354
Query: 283 NRNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 320
+ N+ Y G +GP T +CSNV+P L G Q P C
Sbjct: 355 DINIQYTG----ADGP-ATFMCSNVRPKLVGTQFPKAC 387
>gi|119351604|gb|ABL63521.1| pollen-specific protein MF9l [Brassica oleracea var. alboglabra]
Length = 395
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 128/397 (32%), Positives = 187/397 (47%), Gaps = 90/397 (22%)
Query: 3 LAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGT 62
+ A F FI + G A N V + +D KAF T+ +
Sbjct: 1 MGAYFGAFTVFIFCLLGFSA-NAVYISIGSSSGSDITQALLKAFTTACQSP-----TPSR 54
Query: 63 VLVPPGKYLVSFAEFEGPCKASISFQLQGLLD-----LFSIDTSLSLAK---------GT 108
V++P G++ + + GPCKA + +QG + + DT + G
Sbjct: 55 VVIPKGEFKLGEIQMRGPCKAPVEITIQGTVKADGNAIQGKDTWIVFGNINGFKLNGGGA 114
Query: 109 FHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 167
F G+G AW +N CH+ +C+ LP IRF+F+ ++ I I S+D++ FHIN+LG N+ +
Sbjct: 115 FDGEGNAAWRVNNCHQTFNCKKLPISIRFDFVENAEIRDISSIDAKNFHINVLGAKNMTM 174
Query: 168 NDLKITAHADSS---------------------------------KDILVSEVFCGPGQG 194
+ + I A DS K++ V +V CGPG G
Sbjct: 175 DHINIIAPKDSPNTDGIHLGRSDGVKILNTFISTGDDCISVGDGMKNLHVEKVTCGPGHG 234
Query: 195 ISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIG-IASNFTFEDIVMNNVE 253
ISVGSLG+ +++V G+ V NCT T NG+R+KTWP + AS+ FE+I++ NV
Sbjct: 235 ISVGSLGRYGNEQDVSGIRVINCTLQQTDNGLRIKTWPSAACSTTASDIHFENIIVKNVM 294
Query: 254 NPIVIDQLYCPYNKCN-IKP-------------------KDSMP----------NIEIGN 283
NPI+IDQ YCP+N+CN KP KD++ N+EIG+
Sbjct: 295 NPILIDQEYCPWNQCNKQKPSTIKLANISFKQIRGTSGNKDAVKLLCSRGYPCQNVEIGD 354
Query: 284 RNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 320
++ YNG +GP T CSNV P L G Q P C
Sbjct: 355 IDIRYNG----ADGPATFQ-CSNVSPKLMGTQSPKAC 386
>gi|225460803|ref|XP_002276688.1| PREDICTED: exopolygalacturonase-like [Vitis vinifera]
Length = 405
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 167/329 (50%), Gaps = 54/329 (16%)
Query: 7 FSLLVSFITSVRGID-ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLV 65
F +L+ F+ S + VLNVKD+GAVADG TD+S+AF +W A G +
Sbjct: 10 FCMLMFFLVSTSSVVLGKPAVLNVKDYGAVADGKTDNSRAFLEAWEAACEQQGTSVITVP 69
Query: 66 PPGKYLVSFAEFEGPCKASISFQLQGLLDLFSIDTSLSLAK---------------GTFH 110
GKY V F GPCK SI+F +Q L + +S +L +
Sbjct: 70 RGGKYYVRQVAFTGPCKGSITFLIQADLYAPTDKSSHTLTYWIKFGYVDYLTIAGLANLY 129
Query: 111 GQGETAWPLNQCHKNSDCQ--LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLN 168
G G +AWP C + +C +P +R F+N + + I S+D++ HI+I C ++ L+
Sbjct: 130 GGGPSAWPYKGCGQGQECLQVVPHSLRLEFVNHAWVHHIGSIDAKDKHISIFQCQDVTLS 189
Query: 169 DLKITAHADS---------------------------------SKDILVSEVFCGPGQGI 195
D++ TA DS SKD+ +S+ CGPG G
Sbjct: 190 DIRTTAPHDSPNTDGVHIAVSERVKILDSTFNTGDDCVAIFSGSKDVNISQSICGPGHGF 249
Query: 196 SVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWP-DSHIGIASNFTFEDIVMNNVEN 254
S+GS+GK ++ + + +RNCT + T NG R+KTW S+ AS+ T +D++M+NV N
Sbjct: 250 SIGSMGKFPDEDPITKINIRNCTISHTDNGFRIKTWAVSSYPTFASDITVQDVMMDNVRN 309
Query: 255 PIVIDQLYCPYNKCN--IKPKDSMPNIEI 281
PI+IDQ YCP C+ ++ + + N++I
Sbjct: 310 PIIIDQHYCPRGGCDPTVESQVQIKNLQI 338
>gi|3413322|emb|CAA72003.1| polygalacturonase [Medicago sativa]
Length = 395
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 133/387 (34%), Positives = 179/387 (46%), Gaps = 92/387 (23%)
Query: 8 SLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPP 67
++++S + + GI N + ++K FG + D + AF +W+ A V++P
Sbjct: 9 TIVLSLLFATLGIAQPN-IFDIKSFGGASHA--DITMAFTNAWKAACG-STTASKVMIPR 64
Query: 68 GKYLVSFAEFEGPCKASISFQLQGLL----------DLFS------IDTSLSLAKGTFHG 111
G Y + + +GPCKA I Q+ G + D + +D KG F G
Sbjct: 65 GVYKMHAVDVKGPCKAPIEVQVDGTIQAPQNPDELNDAYQWIKFGYVDYFTLSGKGVFDG 124
Query: 112 QGETAWPLNQCHKNSDCQLPTP-IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
GETAW N C KNS C+ + FNFL S + I S DS+ FH+N+LGC N + +
Sbjct: 125 NGETAWRQNDCGKNSTCKRRSMNFGFNFLKHSIVRDITSKDSKNFHVNVLGCTNFTFDSV 184
Query: 171 KITAH---------------------------------ADSSKDILVSEVFCGPGQGISV 197
ITA D S+ I V V CGPG GISV
Sbjct: 185 TITAPVTSINTDGIHIGRSTDVKVLNTNIATGDDCVSLGDGSRQITVQNVNCGPGHGISV 244
Query: 198 GSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDS-HIGIASNFTFEDIVMNNVENPI 256
GSLGK K+E V + V+NCT T T NGVR+KTWP S ++ FEDI+M NV NP+
Sbjct: 245 GSLGKYPKEEAVEHVLVKNCTITNTDNGVRIKTWPSSPGTSPITDMHFEDIIMVNVLNPV 304
Query: 257 VIDQLYCPYNKC----------------NI----KPKD--------SMP--NIEIGNRNL 286
+IDQ YCP+N+C NI K KD S P +E+ N L
Sbjct: 305 IIDQEYCPWNQCSKLVPSKIKISKVIFKNIRGTSKTKDGVVLICSKSFPCDAVELNNVAL 364
Query: 287 VYNGVNVKVEGPETTSLCSNVKPTLFG 313
+NG V + C NVKP L G
Sbjct: 365 TFNGAPVNAK-------CVNVKPILTG 384
>gi|356551512|ref|XP_003544118.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 392
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/386 (32%), Positives = 177/386 (45%), Gaps = 84/386 (21%)
Query: 9 LLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG 68
LL++ ++ + +D +N+K FG G D ++A +W EA +++P G
Sbjct: 15 LLLAISSTTQSVD-----INIKKFG----GGADITQALTKAWEEACAATS-ASKIVIPGG 64
Query: 69 KYLVSFAEFEGPCKASISFQLQGLLDLFSIDTSLSLA----------------KGTFHGQ 112
Y + + +GPC A I Q G L + +L A KG F GQ
Sbjct: 65 SYKMEAVDLKGPCMAPIEIQFDGTLQAPADPNALDGADEWLKVQHVNFFTLSGKGVFDGQ 124
Query: 113 GETAWPLNQCHKNSDCQLPTP-IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLK 171
G TAW N C N +C+ + FNFLN+S + I S DS+ FH+N+LGC N +
Sbjct: 125 GATAWKQNDCGTNKNCKKRSKNFGFNFLNNSMVRDITSKDSKNFHVNVLGCNNFTFDGFH 184
Query: 172 ITAH---------------------------------ADSSKDILVSEVFCGPGQGISVG 198
++A D SK I V V CGPG GISVG
Sbjct: 185 VSAPNTSINTDGIHIGRSTDVKILNTNIATGDDCVSLGDGSKKITVQNVNCGPGHGISVG 244
Query: 199 SLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDS-HIGIASNFTFEDIVMNNVENPIV 257
SLGK ++E V L V+NCT T T NGVR+KTWP S ++ FEDI M +V NP++
Sbjct: 245 SLGKYPEEEPVEQLLVKNCTLTNTDNGVRIKTWPSSPGASPITDMHFEDITMVDVMNPVI 304
Query: 258 IDQLYCPYNKCNIKP-------KDSMPNIE----------------IGNRNLVYNGVNVK 294
IDQ YCP+N+C+ + K + NI+ + ++ N V +
Sbjct: 305 IDQEYCPWNQCSKQAPSKIKISKVTFKNIQGTSKTKEGVTLICSKGVPCEDVELNNVALT 364
Query: 295 VEGPETTSLCSNVKPTLFGKQIPATC 320
G + C+NVKP + GK TC
Sbjct: 365 FNGAPIVAKCANVKPIVTGKAPACTC 390
>gi|225216942|gb|ACN85236.1| polygalacturonase precursor [Oryza minuta]
Length = 412
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 153/306 (50%), Gaps = 58/306 (18%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDG--IKGTVLVPPGKYLVSFAEFEG 79
A + V +V DFGAVADG TD+SKAF+ +W +A G G YL+ F G
Sbjct: 26 ARHLVFDVTDFGAVADGQTDNSKAFERAWAKACATPGRAAVVVPAAAGGGYLLHPVVFRG 85
Query: 80 PCKASISFQLQGL------LDLF----------SIDTSLSLAKGTFHGQGETAWPLNQCH 123
PCK + ++ G+ LD F ID L GTF G+G ++W LN C
Sbjct: 86 PCKGYVEVRVAGVVRAPAGLDAFRGYHEWINFAGIDGLLVTGGGTFDGRGASSWHLNDCP 145
Query: 124 KNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---- 178
+ DC P+ I+ + ++TITG+ S+DS++FH+ I G ++++++ + I A DS
Sbjct: 146 RKPDCVPPPSSIKLGRVRNATITGVTSLDSKFFHVTIAGSHDVEVSHVIIRAPRDSPNTD 205
Query: 179 -----------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEV 209
S D+ VS V CGPG GISVGSLG+ + +V
Sbjct: 206 GVHIQGSTNVRITDTAVATGDDCVSVGPGSADVTVSGVSCGPGHGISVGSLGRSPGEADV 265
Query: 210 VGLTVRNCTFTCTSNGVRVKTWPDSH------IGIASNFTFEDIVMNNVENPIVIDQLYC 263
L V NCT T+NGVR+KTW S FEDIVM V NPI+IDQ YC
Sbjct: 266 RRLRVSNCTIAGTANGVRIKTWRGQRPPASSAAAAVSGLVFEDIVMRRVRNPIIIDQEYC 325
Query: 264 PYNKCN 269
PY C+
Sbjct: 326 PYLSCH 331
>gi|302143488|emb|CBI22049.3| unnamed protein product [Vitis vinifera]
Length = 345
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 124/340 (36%), Positives = 170/340 (50%), Gaps = 83/340 (24%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
+ +V +GA DG +D S+A +W +A + + TV++P G Y + GPCKA I
Sbjct: 27 IFDVTKYGARTDGNSDISQALLKAWGDACS-SPVASTVMIPDGTYALGQIIIAGPCKAPI 85
Query: 86 SFQLQGLLDLFSIDTSLSLAK-----------------GTFHGQGETAWPLNQCHKNSDC 128
+F +QG + + +DTS A+ G F GQG+ W +C ++ C
Sbjct: 86 NFVVQGTV-MAPVDTSRFRAEAGWITFQQIDQFTLSGDGVFDGQGKIVWG-TKCLSSAYC 143
Query: 129 -QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSSKDILVSEV 187
QLP +N +TI+ D C ++ D S+ I + V
Sbjct: 144 NQLP-------INTNTISFETGDD----------CVSI----------GDGSEQINIQRV 176
Query: 188 FCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDI 247
CGPG GISVGSLGK +E VVG++V+NCT T T NGVRVKTWP SH G AS FEDI
Sbjct: 177 TCGPGHGISVGSLGKYPNEEPVVGISVKNCTLTNTQNGVRVKTWPASHQGTASEMHFEDI 236
Query: 248 VMNNVENPIVIDQLYCPYNKCNIKPKDSMP------------------------------ 277
VMNNV NPI+IDQ YCP+N+CN+K +
Sbjct: 237 VMNNVGNPIIIDQEYCPHNQCNLKSPSRIKISNVSFRNIRGTTSTQVAVKLICSQGVPCQ 296
Query: 278 NIEIGNRNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIP 317
++E+G+ NL YNG +GP S C N+KP + G Q+P
Sbjct: 297 DVELGDINLEYNG----NDGP-AMSQCKNIKPNVLGAQLP 331
>gi|109693363|gb|ABG38468.1| pollen-expressed protein MF9c [Brassica oleracea]
Length = 395
Score = 180 bits (457), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 126/397 (31%), Positives = 187/397 (47%), Gaps = 90/397 (22%)
Query: 3 LAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGT 62
+ A F FI + G A N V + +D KAF T+ +
Sbjct: 1 MGAYFGAFTVFIFCLLGFSA-NAVYISIGSSSGSDITQALVKAFTTACQSP-----TPSR 54
Query: 63 VLVPPGKYLVSFAEFEGPCKASISFQLQGLLD-----LFSIDTSLSLAK---------GT 108
V++P G++ + + GPCKA + +QG + + DT + G
Sbjct: 55 VVIPKGEFKLGEIQMRGPCKAPVEITIQGTVKADGNAIQGKDTWIVFGNINGFKLNGGGA 114
Query: 109 FHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 167
F G+G AW +N CH+ +C+ LP +RF+F+ ++ I I S+D++ FHIN+LG N+ +
Sbjct: 115 FDGEGNAAWRVNNCHQTFNCKKLPISVRFDFVENAEIRDISSIDAKNFHINVLGAKNMTM 174
Query: 168 NDLKITAHADSS---------------------------------KDILVSEVFCGPGQG 194
+ + I A DS K++ V +V CGPG G
Sbjct: 175 DHINIIAPKDSPNTDGIHLGRSDGVKILNTFISTGDDCISVGDGMKNLHVEKVTCGPGHG 234
Query: 195 ISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIG-IASNFTFEDIVMNNVE 253
ISVGSLG+ +++V G+ V NCT T NG+R+KTWP + AS+ FE+I++ NV
Sbjct: 235 ISVGSLGRYGNEQDVSGIRVINCTLQQTDNGLRIKTWPSAACSTTASDIHFENIIVKNVM 294
Query: 254 NPIVIDQLYCPYNKCN-IKP-------------------KDSMP----------NIEIGN 283
NPI+IDQ YCP+N+CN KP KD++ N+EIG+
Sbjct: 295 NPILIDQEYCPWNQCNKQKPSTIKLANISFKQIRGTSGNKDAVKLLCSRGYPCQNVEIGD 354
Query: 284 RNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 320
++ Y+G +GP T CSNV P L G Q P C
Sbjct: 355 IDIRYSG----ADGPATFQ-CSNVSPKLMGTQSPKAC 386
>gi|15236790|ref|NP_193552.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|7268611|emb|CAB78820.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332658607|gb|AEE84007.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 414
Score = 180 bits (457), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 166/309 (53%), Gaps = 51/309 (16%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCK--A 83
+++V+ FGA A+ D +KAF +W +A +++P G++ V F GPC +
Sbjct: 34 LVDVRSFGARANDHRDHTKAFVAAWDKACKSSSSSVNLIIPRGEFSVGSLRFSGPCTNVS 93
Query: 84 SISFQLQGLLDL-----------FSIDTSLSL-AKGTFHGQGETAWPLNQCHKNSDCQL- 130
+++ +++ DL F L+L GTF GQG AWP N C +S+C+L
Sbjct: 94 NLTVRVKASTDLSKYRSGGGWIQFGWINGLTLTGGGTFDGQGALAWPFNNCTSDSNCKLL 153
Query: 131 PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------ 178
PT ++F +N + + I SV+S++FHI ++ C + K L ITA +DS
Sbjct: 154 PTSLKFVGMNRTVVRRISSVNSKFFHIALVECRDFKGTRLNITAPSDSPNTDGIHIERSS 213
Query: 179 ---------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNC 217
+ I ++ + CGPG GISVGSLG+ +++V GL V++C
Sbjct: 214 NVYFSRSHIATGDDCVSIGQGNSQITITSIKCGPGHGISVGSLGRYPNEKDVNGLVVKDC 273
Query: 218 TFTCTSNGVRVKTWPDS-HIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC--NIKPKD 274
+ T+NG+R+KTW +S + A+N TFE+I+MNNV NPI+IDQ YCP++ C N+ K
Sbjct: 274 KISGTTNGIRIKTWANSPGLSAATNMTFENIIMNNVTNPIIIDQSYCPFSSCISNVPSKV 333
Query: 275 SMPNIEIGN 283
+ I N
Sbjct: 334 ELSEIYFKN 342
>gi|29123382|gb|AAO62938.1| polygalactorunase PG11 precursor [Medicago sativa]
Length = 407
Score = 180 bits (456), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 179/384 (46%), Gaps = 81/384 (21%)
Query: 8 SLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPP 67
+++VSF+ + VL++ FG + +D ++A +W+EA +++P
Sbjct: 6 AIIVSFLFLANFCAVQSVVLDISKFGGAPN--SDITQAIGNAWKEAC-LSTTAAKIMIPG 62
Query: 68 GKYLVSFAEFEGPCKASISFQLQGLLDLFSIDTSLSLA----------------KGTFHG 111
G Y ++ E +GPCKA I Q+ G + + + + A KG F G
Sbjct: 63 GTYRMNGVELKGPCKAPIEVQVDGTIQAPADPSQMKAADQWIKFLYMEHLTLSGKGVFDG 122
Query: 112 QGETAWPLNQ-----CHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLK 166
QG T + KNS+ ++ + F F+N+S + G+ S DS+ FH+ +LGC N
Sbjct: 123 QGATVYKKAAPAAAWSGKNSNVKIFMNLGFMFVNNSMVHGLTSKDSKNFHVMVLGCNNFT 182
Query: 167 LNDLKITAHADS---------------------------------SKDILVSEVFCGPGQ 193
+ +TA DS S+ I V V CGPG
Sbjct: 183 FDGFTVTAPGDSPNTDGIHMGRSTDIKILNTNIATGDDCISLGDGSRKITVQNVKCGPGH 242
Query: 194 GISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIA-SNFTFEDIVMNNV 252
GISVGSLGK ++ V G+ V+NCT T T NGVR+KTWPD+ I S+ FEDI+MNNV
Sbjct: 243 GISVGSLGKYTTEDNVEGVIVKNCTLTATQNGVRIKTWPDAPGTITVSDIHFEDIIMNNV 302
Query: 253 ENPIVIDQLYCPYNKCNIKPKDSMPNIEIGNRNLV-----------------------YN 289
NP++IDQ YCP+N+C+ K + +I +N+ N
Sbjct: 303 MNPVIIDQEYCPWNQCSKKNPSKIKLSKISFKNIQGTSGTPEGVVLICSSGVPCDGVELN 362
Query: 290 GVNVKVEGPETTSLCSNVKPTLFG 313
V + G + CSNVKP + G
Sbjct: 363 NVGLTFNGKPAIAKCSNVKPLVTG 386
>gi|124518467|gb|ABN13878.1| polygalacturonase [Brassica rapa subsp. campestris]
Length = 395
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/337 (33%), Positives = 168/337 (49%), Gaps = 84/337 (24%)
Query: 63 VLVPPGKYLVSFAEFEGPCKASISFQLQGLLD-----LFSIDTSLSLAK---------GT 108
V++P G++ + + GPCKA + +QG + + DT + G
Sbjct: 55 VVIPKGEFKLGEIQMRGPCKAPVEITIQGTVKADGNAIQGKDTWIVFGNINGFKLNGGGA 114
Query: 109 FHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 167
F G+G AW +N CH+ +C+ LP IRF+F+ ++ I I S+D++ FHIN+LG N+ +
Sbjct: 115 FDGEGNAAWRVNNCHQTFNCKKLPISIRFDFVENAEIKDISSIDAKNFHINVLGAKNMTM 174
Query: 168 NDLKITAHADSS---------------------------------KDILVSEVFCGPGQG 194
+ + I A DS K++ V +V CGPG G
Sbjct: 175 DHINIIAPKDSPNTDGIHLGRSDGVKILNTFISTGDDCISVGDGMKNLHVEKVTCGPGHG 234
Query: 195 ISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIG-IASNFTFEDIVMNNVE 253
ISVGSLG+ +++V G+ V NCT T NG+R+KTWP + AS+ FE+I++ NV
Sbjct: 235 ISVGSLGRYGNEQDVSGIRVINCTLQQTDNGLRIKTWPSAACSTTASDIHFENIILKNVM 294
Query: 254 NPIVIDQLYCPYNKCN-IKP-------------------KDSMP----------NIEIGN 283
NPI+IDQ YCP+N+CN KP KD++ N+EIG+
Sbjct: 295 NPILIDQEYCPWNQCNKQKPSTIKLANISFKQIRGTSGNKDAVKLLCSRGYPCQNVEIGD 354
Query: 284 RNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 320
++ Y+G +GP T CSNV P L G Q P C
Sbjct: 355 IDIRYSG----ADGPATFQ-CSNVSPKLMGTQSPKAC 386
>gi|297842619|ref|XP_002889191.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335032|gb|EFH65450.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 404
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/381 (34%), Positives = 182/381 (47%), Gaps = 88/381 (23%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPC 81
A +V +V+ +GA DG TD++ AF +W+EA W G V VP G + + F GPC
Sbjct: 30 AGRKVFDVRSYGARGDGKTDNAIAFTKAWKEACQWKGYP-RVYVPFGTFYLGAVTFTGPC 88
Query: 82 KASISFQLQGLL--------------DLFSIDTSLSLA-KGTFHGQGETAWPLNQCHKNS 126
K+ ISF ++G L +F L+++ G GQG +WPLN CHK
Sbjct: 89 KSRISFIIKGTLLAPKDPNAIKQDTWIIFRYVDYLTVSGGGILDGQGSYSWPLNNCHKTL 148
Query: 127 DCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------- 178
C+ LP + F F+ S ++ IKS++S+ H N + ++I A DS
Sbjct: 149 YCRALPMNMGFQFVRFSRLSRIKSINSKMGHFNFFAVQYFDITRVRIMAPGDSPNTDGIK 208
Query: 179 --------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGL 212
+ ++ + V CGPG GISVGSLGK ++ V GL
Sbjct: 209 IGSSNHMKIHHVDIGTGDDCIAILSGTTNLDIYNVKCGPGHGISVGSLGKFKGEKSVQGL 268
Query: 213 TVRNCTFTCTSNGVRVKTW--PDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNI 270
TVR+ F TSNGVR+KTW P S + SNF ++++ M NVENPI IDQ YCP C++
Sbjct: 269 TVRDSIFNGTSNGVRIKTWASPGSP-NLVSNFLYKNLQMINVENPINIDQRYCPNPPCSL 327
Query: 271 KP------KD----------------------SMP--NIEIGNRNLVYNGVNVKVEGPET 300
K KD ++P N+E+ N NLV+ G +GP
Sbjct: 328 KSFSQIQIKDVKFNNIWGTSTNKVAVKLQCSKNVPCKNVELFNVNLVHRG----RDGP-A 382
Query: 301 TSLCSNVKPTLFGKQIPATCV 321
SLC NV GK P +C+
Sbjct: 383 ISLCENVAGWTRGKISPPSCI 403
>gi|357450765|ref|XP_003595659.1| Polygalactorunase PG11 [Medicago truncatula]
gi|357450775|ref|XP_003595664.1| Polygalactorunase PG11 [Medicago truncatula]
gi|355484707|gb|AES65910.1| Polygalactorunase PG11 [Medicago truncatula]
gi|355484712|gb|AES65915.1| Polygalactorunase PG11 [Medicago truncatula]
gi|388500188|gb|AFK38160.1| unknown [Medicago truncatula]
Length = 419
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/389 (32%), Positives = 182/389 (46%), Gaps = 85/389 (21%)
Query: 6 RFS--LLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTV 63
+FS ++VSF+ A + VL++ FG + +D A +W+EA +
Sbjct: 2 KFSTVIIVSFLFLADFCAAQSGVLDIAKFGGKPN--SDIGMALTAAWKEACA-STTAAKI 58
Query: 64 LVPPGKYLVSFAEFEGPCKASISFQLQGLLD-----------------LFSIDTSLSLAK 106
++P G Y ++ E +GPCKA I Q+ G + L+ +LS K
Sbjct: 59 VIPAGTYQLNGIELKGPCKAPIELQVDGTIQAPADPSVIKGTEQWFKFLYMDHLTLS-GK 117
Query: 107 GTFHGQGETAWPLNQ-----CHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILG 161
G F GQG + + Q K + + FNF+N+S + G+ S DS+ FH+ + G
Sbjct: 118 GVFDGQGASVYKKAQPAAAWSGKGGNSKNFMNFGFNFVNNSLVHGVTSKDSKNFHVMVFG 177
Query: 162 CYNLKLNDLKITAHADS---------------------------------SKDILVSEVF 188
C N+ + ITA DS SK I V V
Sbjct: 178 CNNITFDSFTITAPGDSPNTDGIHMGKSTGVKILNTNIGTGDDCVSIGDGSKQITVEGVK 237
Query: 189 CGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIA-SNFTFEDI 247
CGPG G+S+GSLGK +E V G+T++NCT T T NGVR+KTWPD+ I S+ FEDI
Sbjct: 238 CGPGHGLSIGSLGKFTTEENVEGITIKNCTLTATDNGVRIKTWPDAPGTITVSDIHFEDI 297
Query: 248 VMNNVENPIVIDQLYCPYNKCNIKPKDSMPNIEIGNRNLV-------------------- 287
M NV+NP++IDQ YCP+N C+ K + +I +N+
Sbjct: 298 TMTNVKNPVIIDQEYCPWNACSKKNPSKIKLSKITFKNVKGTSGTAEGVVLICSSAVPCD 357
Query: 288 ---YNGVNVKVEGPETTSLCSNVKPTLFG 313
N V++K G TT+ C+NVKP + G
Sbjct: 358 GVELNNVDLKFNGAPTTAKCTNVKPIVTG 386
>gi|297804362|ref|XP_002870065.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315901|gb|EFH46324.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 414
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 124/400 (31%), Positives = 193/400 (48%), Gaps = 86/400 (21%)
Query: 7 FSLLVSFITSVRGIDATNRVL-NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLV 65
F +L+S + +D ++ L +++ FGA A+ D +KAF +W +A ++
Sbjct: 14 FVILLSSSEAETRVDKSSVFLVDIRSFGARANDHRDHTKAFVAAWDKACKSSSSSVHFII 73
Query: 66 PPGKYLVSFAEFEGPCK--ASISFQLQGLLDL-----------FSIDTSLSL-AKGTFHG 111
P G++ V F GPC ++++ +++ DL F L+L GTF G
Sbjct: 74 PRGEFSVGPLRFSGPCTNVSNLTVRVKASTDLSKYRSGGAWIEFGWINGLTLTGGGTFDG 133
Query: 112 QGETAWPLNQCHKNSDCQL-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
QG AWP N C +S+C+L PT ++F +N + + I SV+S++FHI ++ C + K L
Sbjct: 134 QGALAWPFNNCTSDSNCKLLPTSLKFVGMNRTVVRRISSVNSKFFHIALVECRDFKGTRL 193
Query: 171 KITAHADS---------------------------------SKDILVSEVFCGPGQGISV 197
ITA +DS + I ++ + CGPG GISV
Sbjct: 194 NITAPSDSPNTDGIHIERSSNVYFSRSHIATGDDCVSIGQGNSQITITSIKCGPGHGISV 253
Query: 198 GSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDS-HIGIASNFTFEDIVMNNVENPI 256
GSLG+ +++V GL V++C + T+NG+R+KTW +S + A+N TFE+I+MNNV NPI
Sbjct: 254 GSLGRYPNEKDVKGLVVKDCKISGTTNGIRIKTWANSPGLSAATNMTFENIIMNNVTNPI 313
Query: 257 VIDQLYCPYNKC--NIKPKDSMPNIEIGN-RNLVYNGVNVKV------------------ 295
+IDQ YCP++ C N+ K + I N R + V V++
Sbjct: 314 IIDQSYCPFSSCISNVPSKVELSEIYFKNIRGTSSSRVAVQLHCSRGMPCKKVYLENVHL 373
Query: 296 --------------EGPET-TSLCSNVKPTLFGKQIPATC 320
G E +S C NV+ G QIP C
Sbjct: 374 DLSSSDGGRKQSRNRGNEAVSSSCRNVRANYIGTQIPPPC 413
>gi|297823961|ref|XP_002879863.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325702|gb|EFH56122.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 404
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/398 (31%), Positives = 187/398 (46%), Gaps = 88/398 (22%)
Query: 8 SLLVSFITSVRGIDATNR--VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLV 65
+L VS + V T R V NV+ G+ DG TD++ AF + W A + + + V
Sbjct: 10 ALCVSLLFIVVASRPTGRPKVFNVQRHGSKPDGKTDNANAFTSVWSRACRRESGRSKIYV 69
Query: 66 PPGKYLVSFAEFEGPCKASISFQLQGLL-------DL-------FSIDTSLSLA-KGTFH 110
P G + + EF GPCK I F + G L D+ F +LS++ GT
Sbjct: 70 PKGTFYLGGVEFVGPCKNPIEFIIDGTLLAPANPSDIKQDTWINFRYINNLSISGSGTLD 129
Query: 111 GQGETAWPLNQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLND 169
GQG+ +WPLN CHKN C +L + F F+N+S I I S++S+ H N ++ +
Sbjct: 130 GQGKQSWPLNDCHKNPSCPKLAMTMGFAFVNNSNIKDITSLNSKMGHFNFFSVHHFNITG 189
Query: 170 LKITAHADS---------------------------------SKDILVSEVFCGPGQGIS 196
+ I A DS + ++ +S V CGPG GIS
Sbjct: 190 VTIAAPGDSPNTDGIKMGSCSNIHISNTNIGTGDDCIAILSGTTNLDISNVKCGPGHGIS 249
Query: 197 VGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGI-ASNFTFEDIVMNNVENP 255
VGSLGK +++V LTVR+ F TS+G+R+KTW S I SNF +E+I M +V P
Sbjct: 250 VGSLGKNKDEKDVKDLTVRDIVFNGTSDGIRIKTWESSASKILVSNFVYENIQMIDVGKP 309
Query: 256 IVIDQLYCPYNKC------------------------------NIKPKDSMP--NIEIGN 283
I IDQ YCP+ C N++ S P N+E+ +
Sbjct: 310 INIDQKYCPHPPCEHEKKGESHVQIQDLKLKNIYGTSKNKVAVNLQCSKSFPCKNVELID 369
Query: 284 RNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 321
N+ +NG +E +T++C NV ++ GK +P C+
Sbjct: 370 INIKHNG----LEAGSSTAVCENVDGSVRGKMVPQHCL 403
>gi|297813385|ref|XP_002874576.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297320413|gb|EFH50835.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 404
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/398 (32%), Positives = 188/398 (47%), Gaps = 88/398 (22%)
Query: 8 SLLVSFITSVRGIDATNR--VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLV 65
+L VS + V T R V NV+ G+ DG TD++ AF + W A + + + V
Sbjct: 10 ALCVSLLFIVVASRPTGRPKVFNVQRHGSKPDGKTDNANAFTSVWSRACRRESGRSKIYV 69
Query: 66 PPGKYLVSFAEFEGPCKASISFQLQGLL-------DL-------FSIDTSLSLA-KGTFH 110
P G + + EF GPCK I F + G L D+ F +LS++ GT
Sbjct: 70 PKGTFYLGGVEFVGPCKNPIEFVIDGTLLAPANPSDIKQDTWINFRYINNLSISGSGTLD 129
Query: 111 GQGETAWPLNQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLND 169
GQG+ +WPLN CHKN +C +L + F F+N+S I I S++S+ H N ++ +
Sbjct: 130 GQGKQSWPLNDCHKNPNCPKLAMTMGFAFVNNSNIKDITSLNSKMGHFNFFSVHHFNITG 189
Query: 170 LKITAHADS---------------------------------SKDILVSEVFCGPGQGIS 196
+ ITA DS + ++ +S V CGPG GIS
Sbjct: 190 VTITAPGDSPNTDGIKMGSCSNIHISNTNIGTGDDCIAILSGTTNLDISNVKCGPGHGIS 249
Query: 197 VGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGI-ASNFTFEDIVMNNVENP 255
VGSLGK +++V LTVR+ F TS+G+R+KTW S I SNF +E+I M +V P
Sbjct: 250 VGSLGKNKDEKDVKDLTVRDIVFNGTSDGIRIKTWESSASKILVSNFMYENIQMIDVGKP 309
Query: 256 IVIDQLYCPYNKC------------------------------NIKPKDSMP--NIEIGN 283
I IDQ YCP+ C N++ S P N+E+ +
Sbjct: 310 INIDQKYCPHPPCEHEKKGESHVQIQDLKLKNIYGTSKNKVAVNLQCSKSFPCKNVELID 369
Query: 284 RNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 321
N+ NG +E +T++C NV ++ GK +P C+
Sbjct: 370 INIKNNG----LEDGSSTAVCENVDGSVRGKMVPQHCL 403
>gi|149688361|gb|ABR26683.1| polygalacturonase [Fragaria chiloensis]
Length = 405
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/357 (32%), Positives = 175/357 (49%), Gaps = 76/357 (21%)
Query: 40 TDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLLDLFSID 99
TD S+ +W++A V+VP G + + A F+GPCKA I+ Q+ G+L I+
Sbjct: 47 TDISQPLANAWKDACAAT-TPSRVIVPKGTFQLKGAVFKGPCKAPITVQVDGILQAPPIE 105
Query: 100 TSLS----------------LAKGTFHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDS 142
L+ GTF GQG+ +W N C+KN +C L +RF+ + +S
Sbjct: 106 AQLANKEFWVQFLEVERLTVSGTGTFDGQGQNSWKDNDCNKNPNCGGLAINVRFDKVKNS 165
Query: 143 TITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSS----------------------- 179
+ + S++S+ FH NILGC +L + + A DSS
Sbjct: 166 LVRDVTSLNSKNFHFNILGCEHLTFQHVTVKAPGDSSNTDGIHMGRSTEINITDTNIGTG 225
Query: 180 ----------KDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVK 229
+ + VS+V CGPG GIS+GSLG+ +++V GL +R+CT + T NGVR+K
Sbjct: 226 DDCISVGDGTRQLTVSKVSCGPGHGISIGSLGRYDNEDDVSGLNIRDCTLSNTLNGVRIK 285
Query: 230 TWPDSHIGI-ASNFTFEDIVMNNVENPIVIDQLYCPYNKCN--IKPKDSMPNIEIGN--- 283
T+P S AS+ FE I MNNV NP++IDQ YCP+ +CN I K + N+ N
Sbjct: 286 TFPASPKATPASDIHFEKITMNNVANPVLIDQEYCPWGQCNKQIPSKVKISNVSFKNIIG 345
Query: 284 ------------------RNLVYNGVNVKVEGPET-TSLCSNVKPTLFGKQIPATCV 321
+V + +++K+ G T TS C+NV+PT+ P C
Sbjct: 346 TTSTAEALKIVCAKGLHCDQVVLSDIDLKLSGKGTLTSHCANVQPTITRVPPPLACA 402
>gi|242096076|ref|XP_002438528.1| hypothetical protein SORBIDRAFT_10g021590 [Sorghum bicolor]
gi|241916751|gb|EER89895.1| hypothetical protein SORBIDRAFT_10g021590 [Sorghum bicolor]
Length = 422
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/332 (32%), Positives = 169/332 (50%), Gaps = 56/332 (16%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASISF 87
++ GA DG TD +KA + +W A +G + T+++P G YL F GPCK S++
Sbjct: 56 DISKLGAKGDGKTDSTKALNEAWAAACGKEGPQ-TLMIPKGDYLTGPLNFSGPCKGSVTI 114
Query: 88 QLQGLL--------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LPT 132
QL G L ++ +D + KGT GQG+ W N+C + DC+ LP
Sbjct: 115 QLDGNLLGTTDLSAYKTNWIEIEHVDNLVISGKGTLDGQGKQVWDNNKCAQKYDCKILPN 174
Query: 133 PIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-------------- 178
+ +F N++T++GI ++S++FH+N+ C + + D+ +TA DS
Sbjct: 175 TLVLDFCNNATVSGITLLNSKFFHMNVFQCKGVTIKDVTVTAPGDSPNTDGIHIGDSSKV 234
Query: 179 -------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTF 219
S I V+ V CGPG GISVGSLG+ +++V + V++CT
Sbjct: 235 TITGTTIGVGDDCISIGPGSTGINVTGVTCGPGHGISVGSLGRYKDEKDVTDINVKDCTL 294
Query: 220 TCTSNGVRVKTWPDSHIGI-ASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPN 278
TSNGVR+K++ D+ I AS +E+I M++V NPI+ID YCP C K DS
Sbjct: 295 KKTSNGVRIKSYEDAACVITASKLHYENIAMDDVANPIIIDMKYCPNKICTAK-GDSKVT 353
Query: 279 IEIGNRNLVYNGVNVKVEGPETTS-LCSNVKP 309
+ +++ + + PE S LCS+ P
Sbjct: 354 V----KDVTFKNITGTSSTPEAVSLLCSDKIP 381
>gi|242094704|ref|XP_002437842.1| hypothetical protein SORBIDRAFT_10g003580 [Sorghum bicolor]
gi|241916065|gb|EER89209.1| hypothetical protein SORBIDRAFT_10g003580 [Sorghum bicolor]
Length = 395
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/370 (33%), Positives = 180/370 (48%), Gaps = 72/370 (19%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPC 81
A ++VK +GA +G+ DD+K T+W+ A G T+L+ PG Y + +F GPC
Sbjct: 26 AATTTVDVKHYGAKGNGVDDDTKPLMTAWKAACGSAGAV-TMLLSPGTYYIGPVQFHGPC 84
Query: 82 KAS-ISFQLQGLL----DL---------FSIDTSLSLAKGTFHGQGETAWPLNQCHKNSD 127
AS ++FQLQG L DL F T L++A G GQG +WP NQC D
Sbjct: 85 NASTLTFQLQGTLKADTDLSRFRNDWIEFGWVTGLTVAGGVIDGQGAASWPFNQCPFRKD 144
Query: 128 CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-------- 178
C+ LPT +RF ++ + G+ SV+ ++FH+ +L ++++ L+I+A A S
Sbjct: 145 CKVLPTSVRFVNTRNTAVRGVTSVNPKFFHMALLQARGVRMSGLRISAPAGSPNTDGIHI 204
Query: 179 -------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLT 213
+ + V+ V CGPG G+SVGSLG+ + +V +
Sbjct: 205 ERSAGVSITDARIGTGDDCISIGQGNDGVDVARVRCGPGHGMSVGSLGRYAGEGDVTRVR 264
Query: 214 VRNCTFTCTSNGVRVKTWPDSHI-GIASNFTFEDIVMNNVENPIVIDQLYCPYNKC---- 268
VR+ FT T NGVR+KTW +S A++ FE ++M +V NPI+IDQ YCPY C
Sbjct: 265 VRDVVFTGTDNGVRIKTWENSPTKSSAAHMLFESLLMVDVRNPIIIDQKYCPYYTCEHKY 324
Query: 269 ------------NIKPKDSMP-----NIEIGNRNLVYNGVNVKVEGPETTSL-CSNVKPT 310
NIK + P + + LV V++K +G TS C N
Sbjct: 325 VSGVTLQDIQFKNIKGTTTTPVAVTLRCGVPCQGLVLQDVDLKYKGEGGTSAKCENATAK 384
Query: 311 LFGKQIPATC 320
G Q P C
Sbjct: 385 YVGYQFPKPC 394
>gi|92429375|gb|ABE77145.1| putative polygalacturonase [Fragaria x ananassa]
Length = 405
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 116/357 (32%), Positives = 175/357 (49%), Gaps = 76/357 (21%)
Query: 40 TDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLLDLFSID 99
TD S+ +W++A V+VP G + + A F+GPCKA I+ Q+ G+L I+
Sbjct: 47 TDISQPLANAWKDACAAT-TPSRVIVPKGTFQLKGAVFKGPCKAPITVQVDGILQAPPIE 105
Query: 100 TSLS----------------LAKGTFHGQGETAWPLNQCHKNSDC-QLPTPIRFNFLNDS 142
L+ GTF GQG+ +W N C+KN +C L +RF+ + +S
Sbjct: 106 AQLANKEFWVQFLEVERLTVSGTGTFDGQGQNSWKDNDCNKNPNCGGLAINVRFDRVKNS 165
Query: 143 TITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------------------ 178
+ + S++S+ FH NILGC +L + + A DS
Sbjct: 166 LVRDVTSLNSKNFHFNILGCEHLTFQHVIVKAPGDSPNTDGIHMGRSTRINITDTNIGTG 225
Query: 179 ---------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVK 229
++ + VS+V CGPG GIS+GSLG+ +++V GL +R+CT + T NGVR+K
Sbjct: 226 DDCISVGDGTRQLTVSKVSCGPGHGISIGSLGRYDNEDDVSGLNIRDCTLSNTLNGVRIK 285
Query: 230 TWPDS-HIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCN--IKPKDSMPNIEIGN--- 283
T+P S AS+ FE I MNNV NP++IDQ YCP+ +CN I K + N+ N
Sbjct: 286 TFPASPKATTASDIHFEKITMNNVANPVLIDQEYCPWGQCNKQIPSKVKISNVSFKNIIG 345
Query: 284 ------------------RNLVYNGVNVKVEGPET-TSLCSNVKPTLFGKQIPATCV 321
+V + +++K+ G T TS C+NV+PT+ P C
Sbjct: 346 TTSTAEALKIVCAKGLHCDQVVLSDIDLKLSGKGTLTSHCANVQPTITRVPPPLACA 402
>gi|297844650|ref|XP_002890206.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336048|gb|EFH66465.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 401
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 122/401 (30%), Positives = 190/401 (47%), Gaps = 87/401 (21%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK 60
+ +A LL + +T+ R I +V +V+ +GA DG TD++ AF +W++A W+G
Sbjct: 7 VFMAFCLPLLFNAVTTSRPITGP-KVFDVRRYGAKGDGKTDNTNAFTNAWKDACTWNG-P 64
Query: 61 GTVLVPPGKYLVSFAEFEGPCKASISFQLQGLL---------------DLFSIDTSLSLA 105
+ +P G++ + F GPC ISF + G L + ID
Sbjct: 65 SKMYIPKGRFYLGGVTFGGPCNGKISFVIDGTLLAPPNNDDIKKETWINFRYIDYLTVSG 124
Query: 106 KGTFHGQGETAWPLNQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYN 164
GT GQG+ +W LN CHKN++C +L + F+F+ S + GI S++S+ H+N +
Sbjct: 125 GGTVDGQGKRSWSLNDCHKNNNCPKLAINMGFDFVKKSRMNGITSLNSKAGHLNFFSVDH 184
Query: 165 LKLNDLKITA-----------------------HADSSKDIL----------VSEVFCGP 191
+ + + A H + D + + V CGP
Sbjct: 185 FDITGVGLKAPGNSPNTDGIKIALSSNMQISNTHISTGDDCIAMLSGNTNFDIYNVTCGP 244
Query: 192 GQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIA-SNFTFEDIVMN 250
G GIS+GSLGK ++ V GLTVR+ FT T+NG+R+KTW S I SN ++++ M
Sbjct: 245 GHGISIGSLGKNKDEKNVKGLTVRDSVFTGTTNGIRIKTWESSASTIVISNLVYKNLQMI 304
Query: 251 NVENPIVIDQLYCPYNKCN----------------------------IKPKDSMP--NIE 280
+VE+PI IDQ YCPY CN + S P +++
Sbjct: 305 DVESPINIDQKYCPYPPCNKLGDSHIQIQNVTLKNIWGTSRNKVAVKFQCSKSFPCKDVQ 364
Query: 281 IGNRNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 321
+ + NL +NG V+GP +LC NV+ + G+ IP C+
Sbjct: 365 LVDINLTHNG----VDGP-AIALCDNVEGSATGRIIPPHCL 400
>gi|357489585|ref|XP_003615080.1| Polygalacturonase [Medicago truncatula]
gi|355516415|gb|AES98038.1| Polygalacturonase [Medicago truncatula]
Length = 315
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 106/314 (33%), Positives = 166/314 (52%), Gaps = 58/314 (18%)
Query: 9 LLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG 68
L+ + + +A ++ NV + A ++G TD+S+AF +W +A W G K T+L+P G
Sbjct: 7 FLLILLVCIVETEAQYKIFNVITYNASSNGNTDNSEAFLKAWSDACKWKG-KSTILIPNG 65
Query: 69 KYLVSFAEFEGPCKASISFQLQGLLDL------FSIDTSLSL---------AKGTFHGQG 113
Y + GPC +SI+F+L+GLL F+ D ++ G+ QG
Sbjct: 66 TYTL-----RGPCNSSINFRLEGLLKAPIDPKSFASDNWINFKYVNKLMVGGGGSLDAQG 120
Query: 114 ETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKI 172
AW +N C KN +C+ LPT ++F+++ + I + S +S+ H + C N+ L L+I
Sbjct: 121 AYAWKMNDCQKNPNCRPLPTSMKFDYITNGYIHHMHSFNSKQSHFGLYRCNNMTLTKLQI 180
Query: 173 TAHADSS---------------------------------KDILVSEVFCGPGQGISVGS 199
A DS K++ + +V+CGPG GI++GS
Sbjct: 181 KAPGDSPNTDGIKIGKSTGINITSVNIRTGNDCISMLSGLKNVQIMDVYCGPGHGINIGS 240
Query: 200 LGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPD--SHIGIASNFTFEDIVMNNVENPIV 257
LGK +E++ + V+NCTF TSNGVR+K++ + +ASNF +EDIVM NVE IV
Sbjct: 241 LGKYEDEEDLADIIVKNCTFNGTSNGVRIKSYESQLNKTVVASNFIYEDIVMENVEYHIV 300
Query: 258 IDQLYCPYN-KCNI 270
IDQ YC + +CN+
Sbjct: 301 IDQHYCSNSGECNL 314
>gi|449433417|ref|XP_004134494.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
gi|449503877|ref|XP_004162214.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
Length = 424
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 132/392 (33%), Positives = 184/392 (46%), Gaps = 87/392 (22%)
Query: 13 FITSVRGIDATNR---VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK 69
F+ G D +R V NV FGA DG TD+S++F +W A + G V++P G
Sbjct: 35 FLNVNLGKDIKHRKETVFNVLSFGAKPDGKTDNSESFMKTWVAACHSKG-AARVVIPRGT 93
Query: 70 YLVSFAEFEGPCKAS------ISFQLQGLLDL---FS--------IDTSLSLAKGTFHGQ 112
+L++ F GPC ++ I L+G +D+ FS I+ + +G GQ
Sbjct: 94 FLINQIAFAGPCASTSPIIVQIDATLKGGVDISNYFSDEWILFEKINGLIVTGRGALDGQ 153
Query: 113 GETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLK 171
G W N C N +CQ LP ++ N + + GI SV+S+ FH+ + C N++L L
Sbjct: 154 GSAVWEYNDCGMNPNCQKLPVNLKLNNITHGLVKGISSVNSKGFHMFVTNCENVRLRKLH 213
Query: 172 ITAHADS---------------------------------SKDILVSEVFCGPGQGISVG 198
+TA DS S ++ ++++ CGPG GISVG
Sbjct: 214 LTAPEDSPNTDGIHLSRSNNIKISRSVIATGDDCISLGRGSMNVAINKITCGPGHGISVG 273
Query: 199 SLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVI 258
SLGK +E+V G+ V+NCT T NG+R+KTWPDS AS F+DI M NV+NPI+I
Sbjct: 274 SLGKYPNEEDVRGIVVKNCTLLSTDNGLRIKTWPDSPPSAASGILFQDINMVNVKNPILI 333
Query: 259 DQLY-CPYNKC---------------NIKPKDSMP--------------NIEIGNRNLVY 288
DQ Y C C N+K P NIE+ N NL Y
Sbjct: 334 DQEYSCSKTNCQRPPSRVKISDVHYINVKGSSISPVAVQLKCSKQFPCQNIEMFNINLKY 393
Query: 289 NGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 320
+G K E P ++ CSN K G Q P C
Sbjct: 394 SGPPNK-ELP-FSAKCSNAKVGYRGLQFPPPC 423
>gi|359485475|ref|XP_002282563.2| PREDICTED: polygalacturonase [Vitis vinifera]
Length = 312
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 161/326 (49%), Gaps = 72/326 (22%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
+ +V +GA DG +D S+A +W +A + + TV++P G Y + GPCKA I
Sbjct: 27 IFDVTKYGARTDGNSDISQALLKAWGDACS-SPVASTVMIPDGTYALGQIIIAGPCKAPI 85
Query: 86 SFQLQGLLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTIT 145
+F +QG + + +DTS A E W I F ++ T++
Sbjct: 86 NFVVQGTV-MAPVDTSRFRA--------EAGW----------------ITFQQIDQFTLS 120
Query: 146 GIKSVDSRYFHINILG-CYNLKLNDLKITAHADSSKDILVSEVFCGPGQGISVGSLGKGI 204
G D + I C ++ D S+ I + V CGPG GISVGSLGK
Sbjct: 121 GDGVFDGQGKIIETGDDCVSI----------GDGSEQINIQRVTCGPGHGISVGSLGKYP 170
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
+E VVG++V+NCT T T NGVRVKTWP SH G AS FEDIVMNNV NPI+IDQ YCP
Sbjct: 171 NEEPVVGISVKNCTLTNTQNGVRVKTWPASHQGTASEMHFEDIVMNNVGNPIIIDQEYCP 230
Query: 265 YNKCNIKPKDSMP------------------------------NIEIGNRNLVYNGVNVK 294
+N+CN+K + ++E+G+ NL YNG
Sbjct: 231 HNQCNLKSPSRIKISNVSFRNIRGTTSTQVAVKLICSQGVPCQDVELGDINLEYNG---- 286
Query: 295 VEGPETTSLCSNVKPTLFGKQIPATC 320
+GP S C N+KP + G Q+P C
Sbjct: 287 NDGP-AMSQCKNIKPNVLGAQLPRIC 311
>gi|15218263|ref|NP_175003.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|12321534|gb|AAG50821.1|AC026757_2 polygalacturonase, putative [Arabidopsis thaliana]
gi|67633432|gb|AAY78640.1| glycoside hydrolase family 28 protein [Arabidopsis thaliana]
gi|332193823|gb|AEE31944.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 404
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 120/379 (31%), Positives = 180/379 (47%), Gaps = 86/379 (22%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKAS 84
+V NV+ +G+ DG TD++ AF + W+ A + VP G + + EF GPCK
Sbjct: 29 KVFNVRRYGSRPDGKTDNANAFTSVWKRACTRISGSSKIYVPKGTFYLGGVEFVGPCKNP 88
Query: 85 ISFQLQGLL-------DL-------FSIDTSLSLA-KGTFHGQGETAWPLNQCHKNSDC- 128
I F + G L D+ F +LS++ GT GQG+ +WPLN CHKN++C
Sbjct: 89 IEFVIDGTLLAPANPRDIKQDTWINFRYINNLSISGSGTLDGQGKYSWPLNDCHKNTNCP 148
Query: 129 QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---------- 178
+L + F F+N+S I I S++S+ H N + + + ITA DS
Sbjct: 149 KLAMTMGFAFVNNSRIKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGS 208
Query: 179 -----------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVR 215
+ ++ +S + CGPG GISVGSLGK +++V LTVR
Sbjct: 209 CSNIHISNTNIGTGDDCIAILSGTTNLDISNIKCGPGHGISVGSLGKNKDEKDVKHLTVR 268
Query: 216 NCTFTCTSNGVRVKTWPDSHIGI-ASNFTFEDIVMNNVENPIVIDQLYCPYNKC------ 268
+ F TS+G+R+KTW S I SNF +E+I M +V PI IDQ YCP+ C
Sbjct: 269 DTVFNGTSDGIRIKTWESSASKIVVSNFIYENIQMIDVGKPINIDQKYCPHPPCEHEKKG 328
Query: 269 ------------------------NIKPKDSMP--NIEIGNRNLVYNGVNVKVEGPETTS 302
N++ S P N+E+ + NL + G +E +T+
Sbjct: 329 ESHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG----LEKGHSTA 384
Query: 303 LCSNVKPTLFGKQIPATCV 321
+C NV ++ K +P C+
Sbjct: 385 MCENVDGSVRSKMVPQHCL 403
>gi|449457983|ref|XP_004146727.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 325
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/316 (36%), Positives = 158/316 (50%), Gaps = 54/316 (17%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK 60
LL+ L+SFI R + + ++ +G + G D ++A +W +A
Sbjct: 9 LLVTTFLMSLLSFIIESR--SHVDVIFPLRKYGNIVSG-ADVTEALKDAWNDACA-SVRP 64
Query: 61 GTVLVPPGKYLVSFAEFEGPCKASISFQLQGLLDL-----------FSIDTSLSLAKG-T 108
V++P G + V EF+GPCK+ I +++G L F+ ++L+ G
Sbjct: 65 SAVVIPKGIFKVREGEFKGPCKSPIEIRVRGTLQAPKHPHGDSWITFAYVDRMTLSGGGV 124
Query: 109 FHGQGETAWPLNQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 167
F GQG+ W N CHK DC LP F S I S+DS+ FH+NILGC NL
Sbjct: 125 FDGQGKAGWEKNDCHKRIDCANLPIVSSIPF---SLXKRITSLDSKNFHVNILGCNNLTF 181
Query: 168 NDLKITAHADS---------------------------------SKDILVSEVFCGPGQG 194
+ I A DS SK + ++ V CGPG G
Sbjct: 182 KGVNIIAPEDSPNTDGIHIGRSIGISILKSQIATGDDCISLGDGSKRVKITNVTCGPGHG 241
Query: 195 ISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDS-HIGIASNFTFEDIVMNNVE 253
IS+GSLGK +E V G+ V+NCT T+NGVR+KTWP S + GIA++ F DI M NV
Sbjct: 242 ISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWPASPNAGIATDMHFSDITMVNVS 301
Query: 254 NPIVIDQLYCPYNKCN 269
NPI+IDQ YCP+N+CN
Sbjct: 302 NPILIDQEYCPWNQCN 317
>gi|21668071|gb|AAM74219.1|AF518563_1 putative pollen polygalacturonase [Brassica oleracea]
Length = 397
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 113/338 (33%), Positives = 166/338 (49%), Gaps = 84/338 (24%)
Query: 63 VLVPPGKYLVSFAEFEGPCKASISFQLQGLLD-------------LFSIDTSLSL-AKGT 108
VL+P G + + GPCK+ + F LQG + +F L GT
Sbjct: 55 VLIPKGDFKLGEIAMTGPCKSPVEFTLQGNVKADGGSTQGKDRWVVFEKINGFKLNGGGT 114
Query: 109 FHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 167
F G+G AW N CHK +C+ LP +RF+F++++ I + S+D++ FH N++ N+
Sbjct: 115 FDGEGNAAWKANNCHKTFECKKLPISVRFDFVDNAEIKDVTSLDAKNFHFNVISGKNMTF 174
Query: 168 NDLKITAHADSS---------------------------------KDILVSEVFCGPGQG 194
+++KI A A+S K++L+ +V CGPG G
Sbjct: 175 DNIKIIAPAESPNTDGIHLGRCEGVKILNTKISTGDDCISVGDGMKNLLIEKVVCGPGHG 234
Query: 195 ISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSH-IGIASNFTFEDIVMNNVE 253
ISVGSLG+ +++V + V NCT T NG+R+KTWP + A+ FE+I++N V
Sbjct: 235 ISVGSLGRYGWEQDVNDIKVINCTLEGTDNGLRIKTWPSAACTTTAAGIHFENIILNKVS 294
Query: 254 NPIVIDQLYCPYNKCN-IKP-------------------KDSM----------PNIEIGN 283
NPI+IDQ YCP+N+CN KP KD++ N+EIG+
Sbjct: 295 NPILIDQEYCPWNQCNKSKPSTIKLVDITFRNIRGTSGNKDAVKLLCSKGHPCENVEIGD 354
Query: 284 RNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 321
N+ Y G +GP T C+NV P L G Q P CV
Sbjct: 355 INIEYTG----ADGPPTFE-CTNVTPKLVGTQNPKACV 387
>gi|356516863|ref|XP_003527112.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Glycine
max]
Length = 389
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 124/363 (34%), Positives = 175/363 (48%), Gaps = 79/363 (21%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREA-WNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
L++ FG + +D S+AF +W +A + +K +++ G Y + + +GPCKA I
Sbjct: 25 LDISRFGGKPN--SDISQAFLGAWTQACASTTAVK--IVILAGTYQMGAVDVKGPCKAPI 80
Query: 86 SFQ-------------LQGLLDLFSID--TSLSLA-KGTFHGQGETAWPLNQCHKNSDCQ 129
Q L+G F + S +L+ KG F GQG AW N C N +C+
Sbjct: 81 EVQVDGTIQAPTNLANLKGAEQWFKVQHVNSFTLSGKGVFDGQGPIAWKQNDCTTNKNCK 140
Query: 130 -LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---------- 178
L FNFLN S + + S DS+ FH+N+L C NL + KI+A DS
Sbjct: 141 MLCMNFGFNFLNKSIVRDLTSRDSKNFHVNVLACNNLTFDGFKISAPEDSPNTDGIHIGR 200
Query: 179 -----------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVR 215
K+I V V CGPG GISVGSLG+ +E V GL V+
Sbjct: 201 STDVKVLNTNIATGDDCVSLGDGCKNITVQNVNCGPGHGISVGSLGRYDNEEAVEGLLVK 260
Query: 216 NCTFTCTSNGVRVKTWPDSHIGIA-SNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKD 274
NC T T NG+R+KTWP + + I ++ FEDI M NV NP++IDQ YCP+N+C+ K
Sbjct: 261 NCILTDTDNGLRIKTWPSTPLTITVTDMHFEDITMKNVSNPVIIDQEYCPWNQCSKKSPS 320
Query: 275 SMPNIEIGNRNL-----VYNGV------NVKVEGPE------------TTSLCSNVKPTL 311
+ ++ +N+ GV EG E TT+ C+NVKP +
Sbjct: 321 KIKISKVSFKNIKGTSGTKEGVIFICSSGAPCEGVEMTDVDLTFNVAATTAKCANVKPVI 380
Query: 312 FGK 314
GK
Sbjct: 381 TGK 383
>gi|357454641|ref|XP_003597601.1| Polygalacturonase [Medicago truncatula]
gi|355486649|gb|AES67852.1| Polygalacturonase [Medicago truncatula]
Length = 362
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 112/276 (40%), Positives = 147/276 (53%), Gaps = 28/276 (10%)
Query: 7 FSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP 66
F LL+ +S R + + VL+V ++ G + ++A +W+EA +L+P
Sbjct: 8 FVLLLLMASSSR---SQSVVLDVTKHATISVG--EITEALIATWKEACASTS-SSKILIP 61
Query: 67 PGKYLVSFAEFEGPCKASISFQLQGLL----DLFSIDTSLSL------------AKGTFH 110
G Y + GPC A I Q+ G + DL +D GTF
Sbjct: 62 KGTYKLKQVNLRGPCNAPIEIQVDGTIEAPADLTQLDGKYQWIIFGYFDFFTLSGVGTFD 121
Query: 111 GQGETAWPLNQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLND 169
G GE AW N C KN +C L F FLN+S I GI S DS+YFH+N+ GC NL D
Sbjct: 122 GLGEVAWKQNGCGKNKNCNMLSMNFGFYFLNNSIIKGITSKDSKYFHVNVFGCKNLTFMD 181
Query: 170 LKITAHA--DSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVR 227
TA A D SK I + V CGPG GISVGSLGK +E + +TVRNCT T NG+R
Sbjct: 182 FSATAPATRDGSKQITILNVTCGPGHGISVGSLGKYSNEEPLEYITVRNCTLRNTDNGLR 241
Query: 228 VKTWPDSHI--GIASNFTFEDIVMNNVENP-IVIDQ 260
+KTWP + I + SN FE+I+M+NV NP I+IDQ
Sbjct: 242 IKTWPTTPITYDLVSNLHFENIIMDNVSNPVIIIDQ 277
>gi|449524593|ref|XP_004169306.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 424
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 119/374 (31%), Positives = 178/374 (47%), Gaps = 87/374 (23%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
+ ++ +GA + TD ++A +W++A +L+P G Y ++ + +GPCK++I
Sbjct: 43 IFDITTYGAKPN--TDITQALANAWKDACASTN-SSILLIPIGVYQLNQSILDGPCKSTI 99
Query: 86 SFQLQGLLD-----------LFS-IDTSLSLAKGTFHGQGETAWPLNQCHKNSDC-QLPT 132
F+L+G L LF ID G F GQ + N C C + P
Sbjct: 100 DFRLEGTLQAHPNPIGNMMVLFEHIDQLTVSGTGAFDGQRKKGGDKNDCRLEKTCAKFPR 159
Query: 133 PIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH----------------- 175
++FN +N+S + I S+DS+ FHIN+ C N+ L ++ I +
Sbjct: 160 NVKFNSINNSIVKDITSLDSQNFHINLFDCKNVTLQNVTIISPESNPNSDGIHVSSSEEI 219
Query: 176 ----------------ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTF 219
DSSK I ++ V CGPG GIS+GSLG+ EV G+TV++C
Sbjct: 220 NILNTQISNGADCVSVGDSSKQITITNVTCGPGDGISIGSLGRYANRTEVTGVTVKSCKL 279
Query: 220 TCTSNGVRVKTWPDSHIG-IASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK------- 271
T NGVR+K+WPDS AS+ FEDI M NV NP+VI+Q YCP+++C+ K
Sbjct: 280 INTWNGVRIKSWPDSASAYTASDLHFEDIEMVNVSNPVVINQEYCPFDQCDKKIPSKIKI 339
Query: 272 ----------------------PKDSMP--NIEIGNRNLVYNGVNVKVEGPETTSLCSNV 307
KD +P ++E+ + +L Y G ++ TS C NV
Sbjct: 340 SNVSFKNIRGTSATSVAIQLICSKD-LPCEDVEVADIDLTYTGTQGRI-----TSQCRNV 393
Query: 308 KPTLFGKQIPATCV 321
P + GKQ P CV
Sbjct: 394 IPIITGKQNPRACV 407
>gi|449453734|ref|XP_004144611.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 506
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 119/374 (31%), Positives = 178/374 (47%), Gaps = 87/374 (23%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
+ ++ +GA + TD ++A +W++A +L+P G Y ++ + +GPCK++I
Sbjct: 125 IFDITTYGAKPN--TDITQALANAWKDACASTN-SSILLIPIGVYQLNQSILDGPCKSTI 181
Query: 86 SFQLQGLLD-----------LFS-IDTSLSLAKGTFHGQGETAWPLNQCHKNSDC-QLPT 132
F+L+G L LF ID G F GQ + N C C + P
Sbjct: 182 DFRLEGTLQAHPNPIGNMMVLFEHIDQLTVSGTGAFDGQRKKGGDKNDCRLEKTCAKFPR 241
Query: 133 PIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH----------------- 175
++FN +N+S + I S+DS+ FHIN+ C N+ L ++ I +
Sbjct: 242 NVKFNSINNSIVKDITSLDSQNFHINLFDCKNVTLQNVTIISPESNPNSDGIHVSSSEEI 301
Query: 176 ----------------ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTF 219
DSSK I ++ V CGPG GIS+GSLG+ EV G+TV++C
Sbjct: 302 NILNTQISNGADCVSVGDSSKQITITNVTCGPGDGISIGSLGRYANRTEVTGVTVKSCKL 361
Query: 220 TCTSNGVRVKTWPDSHIG-IASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK------- 271
T NGVR+K+WPDS AS+ FEDI M NV NP+VI+Q YCP+++C+ K
Sbjct: 362 INTWNGVRIKSWPDSASAYTASDLHFEDIEMVNVSNPVVINQEYCPFDQCDKKIPSKIKI 421
Query: 272 ----------------------PKDSMP--NIEIGNRNLVYNGVNVKVEGPETTSLCSNV 307
KD +P ++E+ + +L Y G ++ TS C NV
Sbjct: 422 SNVSFKNIRGTSATSVAIQLICSKD-LPCEDVEVADIDLTYTGTQGRI-----TSQCRNV 475
Query: 308 KPTLFGKQIPATCV 321
P + GKQ P CV
Sbjct: 476 IPIITGKQNPRACV 489
>gi|30908915|gb|AAP37458.1| polygalacturonase [Fragaria x ananassa]
Length = 405
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 174/357 (48%), Gaps = 76/357 (21%)
Query: 40 TDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLLDLFSID 99
TD S+ +W++A V+VP G + + A F+GPCKA I+ Q+ G+L I+
Sbjct: 47 TDISQPLANAWKDACAAT-TPSRVIVPKGTFQLKGAVFKGPCKAPITVQVDGILQAPPIE 105
Query: 100 TSLS----------------LAKGTFHGQGETAWPLNQCHKNSDC-QLPTPIRFNFLNDS 142
L+ GTF GQG+ +W N C+KN +C L +RF+ + +S
Sbjct: 106 AQLANKEFWVQFLEVERLTVSGTGTFDGQGQNSWKDNDCNKNPNCGGLAINVRFDRVKNS 165
Query: 143 TITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------------------ 178
+ + S++S+ FH NILGC +L + + A DS
Sbjct: 166 LVRDVTSLNSKNFHFNILGCEHLTFQHVIVKAPGDSPNTDGIHMGRSTRINITDTNIGTG 225
Query: 179 ---------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVK 229
++ + VS+V CGPG GIS+GSLG+ +++V GL +R+CT + T NGVR+K
Sbjct: 226 DDCISVGDGTRQLTVSKVSCGPGHGISIGSLGRYDNEDDVSGLNIRDCTLSNTLNGVRIK 285
Query: 230 TWPDS-HIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCN--IKPKDSMPNIEIGN--- 283
T+P S AS+ FE I MN V NP++IDQ YCP+ +CN I K + N+ N
Sbjct: 286 TFPASPKATTASDIHFEKITMNYVANPVLIDQEYCPWGQCNKQIPSKVKISNVSFKNIIG 345
Query: 284 ------------------RNLVYNGVNVKVEGPET-TSLCSNVKPTLFGKQIPATCV 321
+V + +++K+ G T TS C+NV+PT+ P C
Sbjct: 346 TTSTAEALKIVCAKGLHCDQVVLSDIDLKLSGKGTLTSHCANVQPTITRVPPPLACA 402
>gi|22330722|ref|NP_177961.2| Pectin lyase-like protein [Arabidopsis thaliana]
gi|332197980|gb|AEE36101.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 404
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 120/377 (31%), Positives = 184/377 (48%), Gaps = 86/377 (22%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKAS 84
+V +V+ +GA DG TD++ AF +W++A W G+ V +P G + + F GPCK+
Sbjct: 33 KVFDVRSYGARGDGKTDNTMAFTKAWKDACQWKGLP-RVYIPFGTFYLGAVAFTGPCKSR 91
Query: 85 ISFQLQGLL--------------DLFSIDTSLSLAKG-TFHGQGETAWPLNQCHKNSDCQ 129
ISF ++G L +F L+++ G GQG +WPLN C + +C+
Sbjct: 92 ISFIIKGTLLAPKDPNAIKQDSWIIFRYVDYLTVSGGGILDGQGSYSWPLNNCRQTHNCR 151
Query: 130 -LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSSK-------- 180
LP + F F+ S +T IKS++S+ H+N + + + I A DS
Sbjct: 152 ALPMNMGFQFVRFSRLTRIKSINSKMGHLNFFSVQHFDITRVNIKAPGDSPNTDGIKIGS 211
Query: 181 -------------------------DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVR 215
++ +++V CGPG GISVGSLGK ++ V GL VR
Sbjct: 212 SNHMKIHHVDIATGDDCIAILSGTFNLDINKVNCGPGHGISVGSLGKFKGEKSVQGLIVR 271
Query: 216 NCTFTCTSNGVRVKTWPD-SHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCN----- 269
N F TSNGVR+KTWP + SNF F+++ M +V++PI IDQ YCP C+
Sbjct: 272 NSIFNGTSNGVRIKTWPSPGEPNLVSNFLFKNLQMIDVQSPINIDQRYCPNPPCSFQSFS 331
Query: 270 -IKPKD----------------------SMP--NIEIGNRNLVYNGVNVKVEGPETTSLC 304
I+ +D ++P N+++ N N+V+ G +GP TS+C
Sbjct: 332 KIQIRDVKFQNIWGTSTAKEAVKLQCSKNVPCKNVQLFNINIVHRG----RDGP-ATSVC 386
Query: 305 SNVKPTLFGKQIPATCV 321
NV + GK P +C+
Sbjct: 387 ENVGGWIGGKISPPSCI 403
>gi|30984029|gb|AAP42648.1| polygalacturonase [Brassica napus]
Length = 397
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 113/338 (33%), Positives = 166/338 (49%), Gaps = 84/338 (24%)
Query: 63 VLVPPGKYLVSFAEFEGPCKASISFQLQGLLD-------------LFSIDTSLSL-AKGT 108
VL+P G + + GPCK+ + F LQG + +F L GT
Sbjct: 55 VLIPKGDFKLGEIAMTGPCKSPVEFTLQGNVKADGGSTQGKDRWVVFEKINGFKLNGGGT 114
Query: 109 FHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 167
F G+G AW N CHK +C+ LP +RF+F++++ I + S+D++ FH N++ N+
Sbjct: 115 FDGEGNAAWKANNCHKTFECKKLPISVRFDFVDNAEIKDVTSLDAKNFHFNVISGKNMTF 174
Query: 168 NDLKITAHADSS---------------------------------KDILVSEVFCGPGQG 194
+++KI A A+S K++L+ +V CGPG G
Sbjct: 175 DNIKIIAPAESPNTDGIHLGRCEGVKILNTKISTGDDCISVGDGMKNLLIEKVVCGPGHG 234
Query: 195 ISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSH-IGIASNFTFEDIVMNNVE 253
ISVGSLG+ +++V + V NCT T NG+R+KTWP + A+ FE+I++N V
Sbjct: 235 ISVGSLGRYGWEQDVNDIKVINCTLEGTDNGLRIKTWPSAACTTTAAGIHFENIILNKVS 294
Query: 254 NPIVIDQLYCPYNKCN-IKP-------------------KDSM----------PNIEIGN 283
NPI+IDQ YCP+N+CN KP KD++ N+EIG+
Sbjct: 295 NPILIDQEYCPWNQCNKSKPSTIKLVDITFRNIRGTSGNKDAVKLLCSKGHPCENVEIGD 354
Query: 284 RNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 321
N+ Y G +GP T C+NV P L G Q P CV
Sbjct: 355 INIEYTG----PDGPPTFE-CTNVTPKLVGTQNPKACV 387
>gi|224064462|ref|XP_002301488.1| predicted protein [Populus trichocarpa]
gi|222843214|gb|EEE80761.1| predicted protein [Populus trichocarpa]
Length = 353
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 102/280 (36%), Positives = 156/280 (55%), Gaps = 54/280 (19%)
Query: 44 KAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKAS--ISFQLQGLLD------- 94
+AF +WR A + G +++P G +L S F+GPCK++ I F++QG +
Sbjct: 2 QAFIQTWRAACD-SGAPAKMVIPGGTFLTSPVVFQGPCKSTEPIVFEVQGNVKATTDLSE 60
Query: 95 -------LFSIDTSLSL-AKGTFHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTIT 145
LF I L+L GTF GQG W N CH+N +CQ LP+ I+ + + ++ +
Sbjct: 61 YSSEQWILFEIIDGLTLNGGGTFDGQGSAVWKYNDCHQNKECQPLPSSIKLSKVKNAFVH 120
Query: 146 GIKSVDSRYFHINILGCYNLKLNDLKITAHADS--------------------------- 178
I SVDS+YFH+++ C ++ ++++ +TA A+S
Sbjct: 121 EISSVDSKYFHMHVTSCNSISIHNINLTAPANSPNTDGIHISHSDGVHVTSSKIGTGDDC 180
Query: 179 ------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWP 232
S +IL+S+VFCGPG G+SVGSLGK +E+V G+ V NCT T+NGVR+K++
Sbjct: 181 VSIGQGSTNILISQVFCGPGHGLSVGSLGKYKNEEDVRGIVVTNCTLFNTTNGVRIKSYA 240
Query: 233 DSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKP 272
S A N TF+DI M++V+NPI+IDQ Y C+++P
Sbjct: 241 ASDPSQALNITFKDITMDSVKNPIIIDQKYAC--SCSVQP 278
>gi|357140148|ref|XP_003571632.1| PREDICTED: exopolygalacturonase-like [Brachypodium distachyon]
Length = 416
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 120/367 (32%), Positives = 184/367 (50%), Gaps = 74/367 (20%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCK-ASI 85
N K++GA +G+ DD+K +W+ A G T+++P G Y + +F GPCK A+I
Sbjct: 50 FNAKNYGAKGNGVNDDTKPLMAAWKAACGAAGTV-TLVIPAGTYYIGPTQFHGPCKCAAI 108
Query: 86 SFQLQGLL----DL---------FSIDTSLSLA--KGTFHGQGETAWPLNQCHKNSDCQ- 129
+F LQG L DL F L++A G GQG +WP N+C DC+
Sbjct: 109 TFMLQGTLKAATDLKRFGNDWIEFGWVNHLTVAGQNGIIDGQGAASWPFNKCPIRKDCKV 168
Query: 130 LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----------- 178
LPT + F ++ + I+SV+S++FHI +L N+++++L+I A +S
Sbjct: 169 LPTSVLFVNNQNTVVKDIQSVNSKFFHIALLNTNNIRMSNLRINAPGNSPNTDGIHIERC 228
Query: 179 ----------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRN 216
+ ++ +S V CGPG G+SVGSLG+ + + +V + VR+
Sbjct: 229 NGVFIADTKISTGDDCISIGQGNDNVDISRVHCGPGHGMSVGSLGRYVGEGDVTRIHVRD 288
Query: 217 CTFTCTSNGVRVKTWPDSHI-GIASNFTFEDIVMNNVENPIVIDQLYCPYNKC------- 268
TF T NGVR+KTW +S +A++ FE++VM +V+NPI+IDQ YCPY C
Sbjct: 289 MTFDGTMNGVRIKTWENSPTKSLAAHMVFENMVMKDVQNPIIIDQKYCPYYNCEHKYVSG 348
Query: 269 ---------NIKPKDSMP-----NIEIGNRNLVYNGVNVKVEGP-ETTSLCSNVKPTLFG 313
NIK S+P + + +V V++K +G +S C N K G
Sbjct: 349 VTIKDIQFKNIKGTASLPVAVMLRCGVPCQGVVLQDVDLKFKGQGGASSKCENAKAKYIG 408
Query: 314 KQIPATC 320
Q P C
Sbjct: 409 YQHPKPC 415
>gi|357495419|ref|XP_003617998.1| Polygalacturonase [Medicago truncatula]
gi|41529571|emb|CAF07050.1| polygalacturonase precursor [Medicago truncatula]
gi|355519333|gb|AET00957.1| Polygalacturonase [Medicago truncatula]
Length = 343
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 114/315 (36%), Positives = 155/315 (49%), Gaps = 59/315 (18%)
Query: 8 SLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPP 67
++++SF T GI N + ++K FG ++ D + AF +W+ A V++P
Sbjct: 9 AIVLSFAT--LGIAQPN-IFDIKSFGGASNA--DITMAFTNAWKAACG-STTASKVIIPR 62
Query: 68 GKYLVSFAEFEGPCKASISFQLQGLLDLFSIDTSLSLA-----------------KGTFH 110
G Y + + +GPCKA I Q+ G + L+ A KG F
Sbjct: 63 GIYKIHAVDVKGPCKAPIEVQVDGTIQASQNPDELNDASYQWVKFGYVDYFTLSGKGVFD 122
Query: 111 GQGETAWPLNQCHKNSDCQLPTP-IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLND 169
G GETAW N C KNS C+ + FNFL S + I S DS+ FH+N+LGC N +
Sbjct: 123 GNGETAWTQNDCGKNSTCKRRSMNFGFNFLKLSIVQDIISKDSKNFHVNVLGCTNFTFDG 182
Query: 170 LKITAHADS----------------------------------SKDILVSEVFCGPGQGI 195
L ITA A S S+ I V V CGPG GI
Sbjct: 183 LTITAPATSKNTDGIHIGRSTDDVKVLNTNISTGDDCISLGQGSRQITVQNVNCGPGHGI 242
Query: 196 SVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDS-HIGIASNFTFEDIVMNNVEN 254
SVGSLGK K+E + V+NCT + T NGVR+KTWP S ++ FED +M NV N
Sbjct: 243 SVGSLGKNPKEEATEHVLVKNCTISNTDNGVRIKTWPSSPGTSPITDMHFEDTIMVNVLN 302
Query: 255 PIVIDQLYCPYNKCN 269
P++IDQ YCP+N+C+
Sbjct: 303 PVIIDQEYCPWNQCS 317
>gi|222424823|dbj|BAH20364.1| AT3G14040 [Arabidopsis thaliana]
Length = 289
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 111/286 (38%), Positives = 139/286 (48%), Gaps = 69/286 (24%)
Query: 99 DTSLSLAKGTFHGQGETAWPLNQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHI 157
D +L+ K F GQG AW N C K C LP IRF L +S I I S +S+ FH+
Sbjct: 1 DFTLNGNKAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHM 60
Query: 158 NILGCYNLKLNDLKITAH---------------------------------ADSSKDILV 184
NIL C N+ L D+ I A D +++++V
Sbjct: 61 NILNCKNITLTDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIV 120
Query: 185 SEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTF 244
V CGPG GIS+GSLG+ ++ V G+TVR C T NGVR+KTWP S GIASN F
Sbjct: 121 ENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASNILF 180
Query: 245 EDIVMNNVENPIVIDQLYCPYNKC----------------NIKPKDSMP----------- 277
EDI M+NV P++IDQ YCPY C NIK +
Sbjct: 181 EDITMDNVSLPVLIDQEYCPYGHCKAGVPSKVKLSDVTIKNIKGTSATKVAVKLMCSKGV 240
Query: 278 ---NIEIGNRNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 320
NI + + NLV+NG EGP S CSN+KP L GK +PA C
Sbjct: 241 PCTNIALSDINLVHNG----KEGP-AVSACSNIKPILSGKLVPAAC 281
>gi|124360374|gb|ABN08387.1| Pectolytic enzyme, Pectin lyase fold [Medicago truncatula]
Length = 281
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 112/279 (40%), Positives = 147/279 (52%), Gaps = 31/279 (11%)
Query: 7 FSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP 66
F LL+ +S R + + VL+V ++ G + ++A +W+EA +L+P
Sbjct: 8 FVLLLLMASSSR---SQSVVLDVTKHATISVG--EITEALIATWKEACASTS-SSKILIP 61
Query: 67 PGKYLVSFAEFEGPCKASISFQLQGLL----DLFSIDTSLSL------------AKGTFH 110
G Y + GPC A I Q+ G + DL +D GTF
Sbjct: 62 KGTYKLKQVNLRGPCNAPIEIQVDGTIEAPADLTQLDGKYQWIIFGYFDFFTLSGVGTFD 121
Query: 111 GQGETAWPLNQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLND 169
G GE AW N C KN +C L F FLN+S I GI S DS+YFH+N+ GC NL D
Sbjct: 122 GLGEVAWKQNGCGKNKNCNMLSMNFGFYFLNNSIIKGITSKDSKYFHVNVFGCKNLTFMD 181
Query: 170 LKITAHA-----DSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSN 224
TA A D SK I + V CGPG GISVGSLGK +E + +TVRNCT T N
Sbjct: 182 FSATAPATSPNRDGSKQITILNVTCGPGHGISVGSLGKYSNEEPLEYITVRNCTLRNTDN 241
Query: 225 GVRVKTWPDSHI--GIASNFTFEDIVMNNVENP-IVIDQ 260
G+R+KTWP + I + SN FE+I+M+NV NP I+IDQ
Sbjct: 242 GLRIKTWPTTPITYDLVSNLHFENIIMDNVSNPVIIIDQ 280
>gi|15226644|ref|NP_181560.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|4588005|gb|AAD25946.1|AF085279_19 hypothetical polygalacturonase [Arabidopsis thaliana]
gi|4586048|gb|AAD25666.1| putative polygalacturonase [Arabidopsis thaliana]
gi|330254717|gb|AEC09811.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 404
Score = 173 bits (439), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 125/396 (31%), Positives = 182/396 (45%), Gaps = 88/396 (22%)
Query: 8 SLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPP 67
S L F+ S I + NV+ G+ DG TD++ F + W A + VP
Sbjct: 14 SFLFIFVASRPTIRP--KTFNVQRHGSKPDGKTDNANVFTSIWSRACKRKSGSSKIYVPK 71
Query: 68 GKYLVSFAEFEGPCKASISFQLQGLL-------DL-------FSIDTSLSLA-KGTFHGQ 112
G + + EF GPCK I F + G L D+ F +LS++ GT GQ
Sbjct: 72 GIFYLGGVEFVGPCKNPIEFVIDGTLLAPANPSDIKQDTWINFRYINNLSISGSGTLDGQ 131
Query: 113 GETAWPLNQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLK 171
G+ +WPLN CHKN +C +L + F F+N+S I I S++S+ H N ++ + +
Sbjct: 132 GKQSWPLNDCHKNLNCPKLAMTMGFAFVNNSNIKDITSLNSKMGHFNFFSVHHFNITGVT 191
Query: 172 ITAHADS---------------------------------SKDILVSEVFCGPGQGISVG 198
ITA DS + ++ +S V CGPG GISVG
Sbjct: 192 ITASGDSPNTDGIKMGSCSNMHISNTNIGTGDDCIAILSGTTNLDISNVKCGPGHGISVG 251
Query: 199 SLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGI-ASNFTFEDIVMNNVENPIV 257
SLGK +++V LTVR+ F TS+G+R+KTW S I SNF +E+I M +V PI
Sbjct: 252 SLGKNKDEKDVKNLTVRDVIFNGTSDGIRIKTWESSASKILVSNFVYENIQMIDVGKPIN 311
Query: 258 IDQLYCPYNKC------------------------------NIKPKDSMP--NIEIGNRN 285
IDQ YCP+ C N++ S P NIE+ + N
Sbjct: 312 IDQKYCPHPPCEHEQKGESHVQIQDLKLKNIYGTSKNKVAMNLQCSKSFPCKNIELIDIN 371
Query: 286 LVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 321
+ NG +E + ++C NV ++ GK +P C+
Sbjct: 372 IKSNG----LENSSSIAVCENVDGSMSGKMVPQHCL 403
>gi|15218265|ref|NP_175004.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|12321533|gb|AAG50820.1|AC026757_1 polygalacturonase, putative [Arabidopsis thaliana]
gi|332193824|gb|AEE31945.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 444
Score = 173 bits (439), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 128/402 (31%), Positives = 191/402 (47%), Gaps = 89/402 (22%)
Query: 3 LAARF-SLLVSFITSVRGIDATNR--VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGI 59
+A+ F +L +SF+ V T R V NV+ +G+ DG TD++ AF + W+ A
Sbjct: 4 IASTFKALCLSFLFIVVASRPTIRPKVFNVRRYGSRPDGKTDNANAFTSVWKHACTRISG 63
Query: 60 KGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLL-------DL-------FSIDTSLSLA 105
+ VP G + + EF GPCK I F + G L D+ F +LS++
Sbjct: 64 SSKIYVPKGTFYLGGVEFVGPCKNPIEFVIDGTLLAPANPRDIKQDTWINFRYINNLSIS 123
Query: 106 -KGTFHGQGETAWPLNQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCY 163
GT GQG+ +WPLN CHKN++C +L + F F+N+S I I S++S+ H N +
Sbjct: 124 GSGTLDGQGKYSWPLNDCHKNTNCPKLAMTMGFAFVNNSRIKDITSLNSKMGHFNFFSVH 183
Query: 164 NLKLNDLKITAHADS---------------------------------SKDILVSEVFCG 190
+ + ITA DS + ++ +S V CG
Sbjct: 184 RFNITGVTITAPGDSPNTDGIKMGSCSNIHISNTNIGTGDDCIAILSGTTNLDISNVKCG 243
Query: 191 PGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIG-IASNFTFEDIVM 249
PG GISVGSLGK +++V LTVR+ F TS+G+R+KTW S + SNF +E+I M
Sbjct: 244 PGHGISVGSLGKNKDEKDVKHLTVRDTVFNGTSDGIRIKTWESSASKLVVSNFIYENIQM 303
Query: 250 NNVENPIVIDQLYCPYNKC------------------------------NIKPKDSMP-- 277
+V PI IDQ YCP+ C N++ S P
Sbjct: 304 IDVGKPINIDQKYCPHPPCEHEKKGKSHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCK 363
Query: 278 NIEIGNRNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPAT 319
N+E+ + NL + G +E +T++C NV ++ GK +T
Sbjct: 364 NVELIDINLKHTG----LEKGHSTAMCENVDGSVRGKNGSST 401
>gi|326513250|dbj|BAK06865.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 432
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 166/333 (49%), Gaps = 56/333 (16%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKA-SIS 86
++ GA DG TD +KA + +W A G K T+++P G +L F GPCK ++
Sbjct: 63 DITKLGAKPDGKTDSTKAVEEAWASACGGTG-KQTIVIPKGDFLTGALNFTGPCKGDGVT 121
Query: 87 FQLQGLL--------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LP 131
+L+G L ++ I + KG+ GQG+ W N C KN +C+ LP
Sbjct: 122 IKLEGNLLASNDLSKFPSNWIEIMRIKNLVITGKGSIDGQGKAVWTKNSCQKNYNCKILP 181
Query: 132 TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------- 178
+ +F +D+ I GI ++S++FH+NI C + + D+K+ A DS
Sbjct: 182 NSLVLDFCDDALIEGISIINSKFFHMNIYECKGVTVKDVKVNAPGDSPNTDGIHMGDSSN 241
Query: 179 --------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCT 218
SK + +S V CGPG GIS+GSLG+ +++V + V+NC
Sbjct: 242 VNIIDTTIAVGDDCISIGPGSKQVNISGVTCGPGHGISIGSLGRYKDEKDVTDIHVKNCV 301
Query: 219 FTCTSNGVRVKTWPDSHIG-IASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMP 277
F ++NG+R+K++ DS +AS ++E+I M++ PI+IDQ YCP C K S
Sbjct: 302 FKGSTNGLRIKSYEDSKSPLVASKISYENIKMDDSGYPIIIDQKYCPNKLCTAKGDSSRV 361
Query: 278 NIEIGNRNLVYNGVNVKVEGPETTS-LCSNVKP 309
+ +++ + + PE S LCS+ KP
Sbjct: 362 TV----KDVTFKNITGTSSTPEAVSLLCSDKKP 390
>gi|115475920|ref|NP_001061556.1| Os08g0327200 [Oryza sativa Japonica Group]
gi|38637195|dbj|BAD03446.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113623525|dbj|BAF23470.1| Os08g0327200 [Oryza sativa Japonica Group]
gi|215697618|dbj|BAG91612.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 407
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/369 (31%), Positives = 184/369 (49%), Gaps = 76/369 (20%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCK--AS 84
NV+++GA +G TDDSKA T+W+ A G T+++PPG Y + +F GPC +
Sbjct: 39 FNVRNYGAKGNGQTDDSKALMTAWKAACAATGAV-TLVLPPGTYYIGPVQFHGPCSKATT 97
Query: 85 ISFQLQGLL----DL---------FSIDTSLSLA---KGTFHGQGETAWPLNQCHKNSDC 128
++F +QG L DL F L ++ F GQG +WP N+C DC
Sbjct: 98 MTFLMQGTLKAATDLKRFGNDWVEFGWVNHLIVSGQNGAAFDGQGAASWPFNKCPIRKDC 157
Query: 129 Q-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HAD 177
+ LPT + F + + + SV+S++FH+ +L C K++ +KI+A H +
Sbjct: 158 KVLPTSVLFVNNKNMVVQNVASVNSKFFHMALLQCSGAKISGVKISAPESSPNTDGIHIE 217
Query: 178 SSK-----------------------DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTV 214
S +I V+ V CGPG G+SVGSLG+ + + +V + V
Sbjct: 218 RSNGVSIADTTIATGDDCISIGQGNDNIDVARVHCGPGHGMSVGSLGRYVGEGDVTRIHV 277
Query: 215 RNCTFTCTSNGVRVKTWPDSHIGI-ASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK-- 271
R+ TF T NGVR+KTW +S A++ FE++VMN+V+NPI+IDQ YCPY C K
Sbjct: 278 RDMTFHGTMNGVRIKTWENSPTKSNAAHMLFENLVMNDVQNPIIIDQKYCPYYNCEHKFV 337
Query: 272 PKDSMPNIEIGN-------------------RNLVYNGVNVKVEGPE-TTSLCSNVKPTL 311
++ +++ N + +V V+++ +G ++S C NV+
Sbjct: 338 SGVTIKDVQFKNIKGTATTQVAVLLKCGVPCQGVVLQDVDLRYKGNGVSSSKCENVRAKY 397
Query: 312 FGKQIPATC 320
G Q P C
Sbjct: 398 AGFQNPKPC 406
>gi|224148194|ref|XP_002336609.1| predicted protein [Populus trichocarpa]
gi|222836310|gb|EEE74731.1| predicted protein [Populus trichocarpa]
Length = 318
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 151/273 (55%), Gaps = 52/273 (19%)
Query: 45 AFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKAS--ISFQLQGLLD-------- 94
AF +WR A + G +++P G +L S F+GPCK++ I F++QG +
Sbjct: 1 AFIQTWRAACD-SGAPAKMVIPGGTFLTSPVVFQGPCKSTEPIVFEVQGNVKATTDLSEY 59
Query: 95 ------LFSIDTSLSL-AKGTFHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITG 146
LF I L+L GTF GQG W N CH+N +CQ LP+ I+ + + ++ +
Sbjct: 60 SSEQWILFEIIDGLTLNGGGTFDGQGSAVWKYNDCHQNKECQPLPSSIKLSKVKNAFVHE 119
Query: 147 IKSVDSRYFHINILGCYNLKLNDLKITAHADS---------------------------- 178
I SVDS+YFH+++ C ++ ++++ +TA A+S
Sbjct: 120 ISSVDSKYFHMHVTSCNSISIHNINLTAPANSPNTDGIHISHSDGVHVTSSKIGTGDDCI 179
Query: 179 -----SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPD 233
S +IL+S+VFCGPG G+SVGSLGK +E+V G+ V NCT T+NGVR+K++
Sbjct: 180 SIGQGSTNILISQVFCGPGHGLSVGSLGKYKNEEDVRGIVVTNCTLFYTTNGVRIKSYAA 239
Query: 234 SHIGIASNFTFEDIVMNNVENPIVIDQLYCPYN 266
S A N TF+DI M++V+NPI+IDQ Y N
Sbjct: 240 SDPSQALNITFKDITMDSVKNPIIIDQKYGSRN 272
>gi|357123872|ref|XP_003563631.1| PREDICTED: exopolygalacturonase-like [Brachypodium distachyon]
gi|357123874|ref|XP_003563632.1| PREDICTED: exopolygalacturonase-like [Brachypodium distachyon]
Length = 412
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 163/333 (48%), Gaps = 55/333 (16%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
L++ GA DG TD +KA + +W A G K T+L+P G +L F GPC I+
Sbjct: 43 LDIVKLGATGDGKTDSTKAVEEAWASACGGTG-KQTILIPKGDFLTGPLNFTGPCTGDIT 101
Query: 87 FQLQGLL--------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LP 131
Q+ G L ++ + + KG GQG W N C KN +C+ LP
Sbjct: 102 IQVDGNLLGSNDLAKYKANWIEIMRVKNLVITGKGKLDGQGPAVWGKNSCAKNYNCKILP 161
Query: 132 TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------- 178
+ +F N++ I GI ++S++FH+NI C + + D+ IT+ DS
Sbjct: 162 NTLVLDFCNNTLIEGITLLNSKFFHLNIYECRGITVKDVTITSPGDSPNTDGIHMGDASN 221
Query: 179 --------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCT 218
+ + +S V CGPG GISVGSLG+ +++V +TV+NC
Sbjct: 222 ITITDTKIGTGDDCISIGPGTSGVNISGVNCGPGHGISVGSLGRYKDEKDVTDITVKNCV 281
Query: 219 FTCTSNGVRVKTWPDSHIG-IASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMP 277
++NGVR+K++ D+ +AS T+E+I M +V PI+IDQ YCP C KP +
Sbjct: 282 LNKSTNGVRIKSYEDAKSPLVASKLTYENIKMMDVGYPIIIDQKYCPNKICPPKPNSAKV 341
Query: 278 NIEIGNRNLVYNGVNVKVEGPETTS-LCSNVKP 309
+ +++ + + PE S LCS+ +P
Sbjct: 342 TV----KDVTFRNITGTSSTPEAVSLLCSDKQP 370
>gi|449462487|ref|XP_004148972.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 458
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 125/372 (33%), Positives = 174/372 (46%), Gaps = 78/372 (20%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKA-S 84
V +V GA ADG TDD++AF+T+W A +L+P G YLV GPCK+
Sbjct: 88 VFDVTKHGAKADGKTDDAQAFETTWIAACRNTVGPVKILIPKGTYLVGPMTLAGPCKSFP 147
Query: 85 ISFQLQGLL------------DLFSID--TSLSL-AKGTFHGQGETAWPLNQCHKNSDCQ 129
I+ + QG++ + FSI+ T L G F GQG W N C N DCQ
Sbjct: 148 ITIENQGIVKATTDLSEYSSPEWFSIEDITGFILTGSGVFDGQGTAVWAYNDCKSNKDCQ 207
Query: 130 L-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADS 178
L P I+F+ LN + + GI S++S+ FH+++ CYN + ++ I A H +
Sbjct: 208 LLPISIKFSGLNHTIVDGITSLNSKGFHMSLFNCYNFTITNVNIIAPDESPNTDGIHLST 267
Query: 179 SK-----------------------DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVR 215
S+ I V+ V CGPG G+SVGSLGK ++++V + V+
Sbjct: 268 SELVNIMNSIIGTGDDCVSIGHSTVKITVTNVTCGPGHGLSVGSLGKYSREKDVYDVLVK 327
Query: 216 NCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDS 275
NCT +NG R+KT+ G+AS FEDI+M NV+ PI+IDQ Y K K S
Sbjct: 328 NCTIFNATNGARIKTFASPISGLASGIIFEDIIMYNVKYPIIIDQTYSTDENKESKWKVS 387
Query: 276 ------------------------MP--NIEIGNRNLVYNGVNVKVEGPETTSLCSNVKP 309
+P + + + NL Y G + K S C N K
Sbjct: 388 DVHFKNIRGTSATNVGVLLECSKLLPCEGVVLKDINLTYGGTDSK--NTTIVSSCLNAKI 445
Query: 310 TLFGKQIPATCV 321
T FG Q P CV
Sbjct: 446 TTFGVQNPPPCV 457
>gi|449527009|ref|XP_004170505.1| PREDICTED: exopolygalacturonase clone GBGE184-like [Cucumis
sativus]
Length = 395
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/287 (36%), Positives = 150/287 (52%), Gaps = 50/287 (17%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKAS 84
+V N+ GA ADG TD ++AF +W +A + G V+ PPG +L + GPC
Sbjct: 65 KVFNIIAHGAKADGRTDSTQAFMQAWVKACHSSG-PAKVVFPPGTFLTGPLVYAGPCDGP 123
Query: 85 ISFQLQGLLD--------------LFSIDTSLSL-AKGTFHGQGETAWPLNQCHKNSDCQ 129
++ ++QG + LF T L+L +GTF GQG W N C K+ C
Sbjct: 124 MTVEIQGTVKATTDISQYSSAEWILFESVTGLNLIGRGTFDGQGADTWKYNDCSKHPQCI 183
Query: 130 LP-TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---------- 178
+P T I+FN + + GI SV+S+ FHI ++ +N+K+N++ I A +S
Sbjct: 184 IPPTSIKFNKVTQGLMEGITSVNSKAFHIFVVLSHNIKINNVHIVAPGNSPNTDGVHISQ 243
Query: 179 -----------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVR 215
S +I V + CGPG GISVGSLGK ++EV G+ V
Sbjct: 244 TDVVNVTNSIIGTGDDCVSIGHGSTNINVLNITCGPGHGISVGSLGKYRDEKEVRGIFVS 303
Query: 216 NCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLY 262
NCT T+NGVR+KTW S G A+ TF++IV++ V NPI+IDQ Y
Sbjct: 304 NCTIRNTTNGVRIKTWAASPPGQATRITFQNIVLDKVRNPIIIDQNY 350
>gi|8052532|gb|AAF71796.1|AC013430_5 F3F9.9 [Arabidopsis thaliana]
Length = 412
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 120/385 (31%), Positives = 184/385 (47%), Gaps = 94/385 (24%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKAS 84
+V +V+ +GA DG TD++ AF +W++A W G+ V +P G + + F GPCK+
Sbjct: 33 KVFDVRSYGARGDGKTDNTMAFTKAWKDACQWKGLP-RVYIPFGTFYLGAVAFTGPCKSR 91
Query: 85 ISFQLQGLL--------------DLFSIDTSLSLA-KGTFHGQGETAWPLNQCHKNSDCQ 129
ISF ++G L +F L+++ G GQG +WPLN C + +C+
Sbjct: 92 ISFIIKGTLLAPKDPNAIKQDSWIIFRYVDYLTVSGGGILDGQGSYSWPLNNCRQTHNCR 151
Query: 130 -LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSSK-------- 180
LP + F F+ S +T IKS++S+ H+N + + + I A DS
Sbjct: 152 ALPMNMGFQFVRFSRLTRIKSINSKMGHLNFFSVQHFDITRVNIKAPGDSPNTDGIKIGS 211
Query: 181 -------------------------DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVR 215
++ +++V CGPG GISVGSLGK ++ V GL VR
Sbjct: 212 SNHMKIHHVDIATGDDCIAILSGTFNLDINKVNCGPGHGISVGSLGKFKGEKSVQGLIVR 271
Query: 216 NCTFTCTSNGVRVKTWPD-SHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCN----- 269
N F TSNGVR+KTWP + SNF F+++ M +V++PI IDQ YCP C+
Sbjct: 272 NSIFNGTSNGVRIKTWPSPGEPNLVSNFLFKNLQMIDVQSPINIDQRYCPNPPCSFQVTS 331
Query: 270 ---------IKPKD----------------------SMP--NIEIGNRNLVYNGVNVKVE 296
I+ +D ++P N+++ N N+V+ G +
Sbjct: 332 LTRNKSFSKIQIRDVKFQNIWGTSTAKEAVKLQCSKNVPCKNVQLFNINIVHRG----RD 387
Query: 297 GPETTSLCSNVKPTLFGKQIPATCV 321
GP TS+C NV + GK P +C+
Sbjct: 388 GP-ATSVCENVGGWIGGKISPPSCI 411
>gi|15218267|ref|NP_175005.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|12321537|gb|AAG50824.1|AC026757_5 polygalacturonase, putative [Arabidopsis thaliana]
gi|332193825|gb|AEE31946.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 444
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 120/377 (31%), Positives = 179/377 (47%), Gaps = 86/377 (22%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKAS 84
+V NV+ +G+ DG TD++ AF + W+ A + VP GK+ + EF GP K
Sbjct: 29 KVFNVRRYGSRPDGKTDNANAFTSVWKRACTRISGSSKIYVPKGKFYLGGVEFVGPYKNP 88
Query: 85 ISFQLQGLL-------DL-------FSIDTSLSLA-KGTFHGQGETAWPLNQCHKNSDC- 128
I F + G L D+ F +LS++ GT GQG+ +WPLN CHKN++C
Sbjct: 89 IEFVIDGTLLAPANPRDIKQDTWINFRYINNLSISGSGTLDGQGKYSWPLNDCHKNTNCP 148
Query: 129 QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---------- 178
+L + F F+N+S I I S++S+ H N + + + ITA DS
Sbjct: 149 ELAMTMGFAFVNNSRIKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMGS 208
Query: 179 -----------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVR 215
+ ++ +S V CGPG GISVGSLGK +++V LTVR
Sbjct: 209 CSNIHISNTNIGTGDDCIAILSGTTNLDISNVKCGPGHGISVGSLGKNKDEKDVKHLTVR 268
Query: 216 NCTFTCTSNGVRVKTWPDSHIG-IASNFTFEDIVMNNVENPIVIDQLYCPYNKC------ 268
+ F TS+G+R+KTW S + SNF +E+I M +V PI IDQ YCP+ C
Sbjct: 269 DTVFNGTSDGIRIKTWESSASKLVVSNFIYENIQMIDVGKPINIDQKYCPHPPCEHEKKG 328
Query: 269 ------------------------NIKPKDSMP--NIEIGNRNLVYNGVNVKVEGPETTS 302
N++ S P N+E+ + NL + G +E +T+
Sbjct: 329 KSHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG----LEKGHSTA 384
Query: 303 LCSNVKPTLFGKQIPAT 319
+C NV ++ GK +T
Sbjct: 385 MCENVDGSVRGKNGSST 401
>gi|356519948|ref|XP_003528630.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 422
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 183/373 (49%), Gaps = 77/373 (20%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKA- 83
+++NV+DFGA DG D +++F +W + + + VP G+++VS F GPC A
Sbjct: 51 QIVNVQDFGAKGDGKFDCTESFMQAWAKTCHQSSGPARLYVPAGRFVVSSMYFNGPCNAT 110
Query: 84 SISFQLQGLLDLFSIDTSLS----------------LAKGTFHGQGETAWPLNQ-CHKNS 126
SI+ Q+QG + L + D S + GTF GQG+ +W Q C +
Sbjct: 111 SITIQVQGTV-LATTDISEYENGDWLFFQNHNGLKIVGGGTFDGQGKDSWQYAQNCESAN 169
Query: 127 D---CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA--------- 174
D + P+ + F+ ++ + I+SV+ + FHI + C N++L LK+ A
Sbjct: 170 DGSCARNPSNLYFSGNSNLVVQNIRSVNPKGFHIFVTKCTNVRLRKLKLVAPGTSPNTDG 229
Query: 175 ----HADSS--------------------KDILVSEVFCGPGQGISVGSLGKGIKDEEVV 210
H+D+ ++I ++++ CGPG GIS+GSLGK + +V
Sbjct: 230 IHVSHSDTVIMSRNTIATGDDCVSLIPGLRNIFINKLKCGPGHGISIGSLGKYADEGDVR 289
Query: 211 GLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNI 270
G+ ++NC+ T T+NG+R+K WP+ + G AS+ +F DI+M +V+NPI+IDQ Y Y C
Sbjct: 290 GVRIKNCSLTGTTNGLRIKAWPERYPGAASDVSFSDIIMKDVKNPIIIDQEYECYPDCKK 349
Query: 271 KPK-DSMPNIEIGN---------------------RNLVYNGVNVKVEGPETTSLCSNVK 308
KP + NI N + + +++K+ TTS C N +
Sbjct: 350 KPSLVKLQNIHFSNIRGTTISPLAVDLRCSGLFPCQGVTIRDIDLKIGLTPTTSRCVNTR 409
Query: 309 PTLFGKQIPATCV 321
P G +P C
Sbjct: 410 PLFGGLLMPPACA 422
>gi|115468432|ref|NP_001057815.1| Os06g0545400 [Oryza sativa Japonica Group]
gi|53791990|dbj|BAD54575.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|53791992|dbj|BAD54577.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|53792554|dbj|BAD53543.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113595855|dbj|BAF19729.1| Os06g0545400 [Oryza sativa Japonica Group]
gi|215704289|dbj|BAG93129.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768613|dbj|BAH00842.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768615|dbj|BAH00844.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 412
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/333 (33%), Positives = 164/333 (49%), Gaps = 58/333 (17%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASISF 87
+V G DG TD +KA + +W A G K T++VP G +L F GPCK I
Sbjct: 46 DVVKLGGKGDGKTDSTKAVNEAWTAACAGTG-KQTIVVPKGDFLTGPLNFTGPCKGDIVI 104
Query: 88 QLQGLLDLFSIDTSL------------SL---AKGTFHGQGETAWPLNQCHKNSDCQ-LP 131
QL G L L S D +L SL KG GQG W N C K DC+ LP
Sbjct: 105 QLDGNL-LGSTDLALFKSNWIEIMRLESLEISGKGKLDGQGAAVWSKNSCAKKYDCKILP 163
Query: 132 TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------- 178
+ +F+N+ I+GI V+ ++FH+N+ N+ + D+ ITA DS
Sbjct: 164 NTLVLDFVNNGLISGISLVNPKFFHMNVFKSKNITIKDVTITAPGDSPNTDGIHMGDSSK 223
Query: 179 --------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCT 218
++ + +S V CGPG GISVGSLG+ +++V +TV+NC
Sbjct: 224 ISIIDTVIGTGDDCISIGPGTEGVNISGVTCGPGHGISVGSLGRYKDEKDVTDVTVKNCV 283
Query: 219 FTCTSNGVRVKTWPD-SHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMP 277
++NGVR+K++ D + + AS FT+E+I M +V NPI+ID YCP C +
Sbjct: 284 LKKSTNGVRIKSYEDAASVLTASKFTYENIKMEDVANPIIIDMKYCPNKICT-----ANG 338
Query: 278 NIEIGNRNLVYNGVNVKVEGPETTS-LCSNVKP 309
N ++ +++ + + PE S LCS+ P
Sbjct: 339 NSKVTIKDITFKNITGTSSTPEAVSLLCSDKLP 371
>gi|125555670|gb|EAZ01276.1| hypothetical protein OsI_23299 [Oryza sativa Indica Group]
Length = 413
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/333 (33%), Positives = 164/333 (49%), Gaps = 58/333 (17%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASISF 87
+V G DG TD +KA + +W A G K T++VP G +L F GPCK I
Sbjct: 47 DVVKLGGKGDGKTDSTKAVNEAWTAACAGTG-KQTIVVPKGDFLTGPLNFTGPCKGDIVI 105
Query: 88 QLQGLLDLFSIDTSL------------SL---AKGTFHGQGETAWPLNQCHKNSDCQ-LP 131
QL G L L S D +L SL KG GQG W N C K DC+ LP
Sbjct: 106 QLDGNL-LGSTDLALFKSNWIEIMRLESLEISGKGKLDGQGAAVWSKNSCAKKYDCKILP 164
Query: 132 TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------- 178
+ +F+N+ I+GI V+ ++FH+N+ N+ + D+ ITA DS
Sbjct: 165 NTLVLDFVNNGLISGISLVNPKFFHMNVFKSKNITIKDVTITAPGDSPNTDGIHMGDSSK 224
Query: 179 --------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCT 218
++ + +S V CGPG GISVGSLG+ +++V +TV+NC
Sbjct: 225 ISIIDTVIGTGDDCISIGPGTEGVNISGVTCGPGHGISVGSLGRYKDEKDVTDVTVKNCV 284
Query: 219 FTCTSNGVRVKTWPD-SHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMP 277
++NGVR+K++ D + + AS FT+E+I M +V NPI+ID YCP C +
Sbjct: 285 LKKSTNGVRIKSYEDAASVLTASKFTYENIKMEDVANPIIIDMKYCPNKICT-----ANG 339
Query: 278 NIEIGNRNLVYNGVNVKVEGPETTS-LCSNVKP 309
N ++ +++ + + PE S LCS+ P
Sbjct: 340 NSKVTIKDITFKNITGTSSTPEAVSLLCSDKLP 372
>gi|158264069|gb|ABW24665.1| pollen-specific polygalacturonase [Brassica rapa subsp. campestris]
Length = 421
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/300 (34%), Positives = 154/300 (51%), Gaps = 51/300 (17%)
Query: 13 FITSVRGIDATN---RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK 69
++ RG+ A V ++ GAV +G TD SKAF +W + + T+LVP G
Sbjct: 35 YLGGRRGLAAVAGNPTVFDITKNGAVGNGATDSSKAFLNTWLQVC-ASPVPATLLVPKGD 93
Query: 70 YLVSFAEFEGPCKASISFQLQGLLD------------LFS-IDTSLSLAKGTFHGQGETA 116
+L F GPCK+ ++ ++QG + LF +D + GTFHG+GE
Sbjct: 94 FLAGPVIFAGPCKSKVTVEVQGTIIAPPSGYPTPEWFLFEHVDNVVLTGPGTFHGKGEAV 153
Query: 117 WPLNQCHKNSDCQLP-TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH 175
W + C K +C LP T ++F + + I+GI SV+++ FH+ ++ N+ + ++KI A
Sbjct: 154 WKADGCGKKLNCNLPPTSLKFRNILNLDISGISSVNAKAFHMFLVKTTNVNVQNIKIIAP 213
Query: 176 ADS---------------------------------SKDILVSEVFCGPGQGISVGSLGK 202
A+S S ++ V V CGPG G+SVGSLGK
Sbjct: 214 AESPNTDGIHLSNAVNVHIADSLIATGDDCISVGRGSTNVTVERVTCGPGHGLSVGSLGK 273
Query: 203 GIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLY 262
+E V G+ RNCT T NG+R+K+W S A + T+EDI+M NV+NPI+IDQ Y
Sbjct: 274 YPNEENVAGIHFRNCTMKDTDNGLRIKSWGGSSPSTAVDITYEDIMMTNVKNPIIIDQNY 333
>gi|357442427|ref|XP_003591491.1| Polygalacturonase [Medicago truncatula]
gi|355480539|gb|AES61742.1| Polygalacturonase [Medicago truncatula]
Length = 407
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/376 (30%), Positives = 173/376 (46%), Gaps = 83/376 (22%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKA-- 83
+ +V FGAVADG TD+ + +W+ A + TVL+P G ++ F GPC +
Sbjct: 34 IYDVTKFGAVADGKTDNVEKIRAAWQAACKTSTVPATVLIPAGTFVTGQTLFAGPCTSPK 93
Query: 84 ----SISFQLQGLLDLF-----------SIDTSLSLAKGTFHGQGETAWPLNQCHKNS-D 127
I + Q DL +ID + G F GQG +WPLN C +N +
Sbjct: 94 PITVEIVGKAQATTDLSEYYSPEWFQFENIDGLVLKGSGVFDGQGSISWPLNDCKQNKGN 153
Query: 128 C-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD--------- 177
C LP+ ++F+ + ++ + + S++S FH ++ GC N+ +L ITA +
Sbjct: 154 CASLPSSLKFDKIKNAIVQDVTSLNSMQFHFHLHGCSNISFTNLHITAPGNSPNTDGMHI 213
Query: 178 ------------------------SSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLT 213
S+ +I +S + CGPG GISVGSLGK +++ V G++
Sbjct: 214 SSSDFITVTNSVIATGDDCISVGHSTSNITISGITCGPGHGISVGSLGKRPEEKTVNGVS 273
Query: 214 VRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC----- 268
V+NCTF ++NG R+KTW + A N +ED++M +V+NPIVIDQ Y +
Sbjct: 274 VKNCTFIGSTNGARIKTWIGTAPAEAKNIVYEDLIMKDVQNPIVIDQSYGKKERVPSTSV 333
Query: 269 -----------------NI------KPKDSMPNIEIGNRNLVYNGVNVKVEGPETTSLCS 305
NI K+ NIE+ + L Y G + P S C
Sbjct: 334 WKISDAHFRRIKGTTVSNIPVSLQCSSKNPCENIEVADVELTYVGPQKSI--PFANS-CI 390
Query: 306 NVKPTLFGKQIPATCV 321
N K GK PA CV
Sbjct: 391 NAKAIFGGKLNPAACV 406
>gi|297848486|ref|XP_002892124.1| hypothetical protein ARALYDRAFT_887420 [Arabidopsis lyrata subsp.
lyrata]
gi|297337966|gb|EFH68383.1| hypothetical protein ARALYDRAFT_887420 [Arabidopsis lyrata subsp.
lyrata]
Length = 422
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/315 (33%), Positives = 161/315 (51%), Gaps = 54/315 (17%)
Query: 1 LLLAARFSLLVS---FITSVRGIDATN---RVLNVKDFGAVADGITDDSKAFDTSWREAW 54
+L+A F V+ ++ RG+ A + V ++ FGAV DG T+ KAF +W +
Sbjct: 20 ILMALVFGSCVANGEYLGGRRGLAANSGNPTVYDITKFGAVGDGSTNTFKAFLNTWIQVC 79
Query: 55 NWDGIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLLD------------LFS-IDTS 101
+ + T+LVP G++L F GPCK+ ++ +QG + LF +D
Sbjct: 80 D-SPVPATLLVPKGQFLAGPVIFAGPCKSKVTVNVQGTIIATTSGYATPEWFLFERVDNL 138
Query: 102 LSLAKGTFHGQGETAWPLNQCHKNSDCQLP-TPIRFNFLNDSTITGIKSVDSRYFHINIL 160
+ GTFHG+GE W + C K C LP T ++F + + I GI SV+++ FH+ ++
Sbjct: 139 VLTGTGTFHGKGEAVWKADGCGKKVQCNLPPTSLKFRNMKNVEINGISSVNAKAFHMFLV 198
Query: 161 GCYNLKLNDLKITAHADS---------------------------------SKDILVSEV 187
N+ + ++K+ A A+S S ++ V V
Sbjct: 199 KTENVNIQNIKLIAPAESPNTDGIHLSNADNVSILDSTIATGDDCVSVGRGSNNVTVERV 258
Query: 188 FCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDI 247
CGPG G+SVGSLGK +E+V G+ V NCT T NG+R+KTW S A + FE+I
Sbjct: 259 ICGPGHGLSVGSLGKYKNEEDVSGIHVNNCTMVETDNGLRIKTWGGSDPSKAVDIKFENI 318
Query: 248 VMNNVENPIVIDQLY 262
+M +V+NPI+IDQ Y
Sbjct: 319 IMQSVKNPIIIDQNY 333
>gi|356554595|ref|XP_003545630.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Glycine
max]
Length = 290
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/307 (34%), Positives = 153/307 (49%), Gaps = 54/307 (17%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK 60
++ A +L S++ + G+ +++ +GA+ +G D + +WR+A
Sbjct: 1 MVTIALVLMLASYVKAHVGL------FDIRKYGAIPNG--DTTMDLQNAWRDAC-VSMTP 51
Query: 61 GTVLVPPGKYLVSFAEFEGPCKA--SISFQLQGLLDLFSIDTSLSLAKGTFHGQGETAWP 118
V+VP GKY + +F G K I F L LF GTFHGQG+ AW
Sbjct: 52 SKVVVPSGKYKLRQIDFMGLIKLILRIRFGYINFLTLF--------GNGTFHGQGKMAWK 103
Query: 119 LNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNL------------ 165
N C KN +C+ L F N+ I I D++YFH+N+ GC N+
Sbjct: 104 QNNCAKNKNCKKLAMNFGFEMANNLVIXDITXKDNKYFHVNVFGCXNITFTNFRVSSPAY 163
Query: 166 ----------KLNDLKIT-----------AHADSSKDILVSEVFCGPGQGISVGSLGKGI 204
KL +KIT + D SK++ + V C P GISVGSLGK
Sbjct: 164 NPNTDGTHIRKLTQVKITNSKXGTNDDCISLGDGSKEVTILNVTCEPRHGISVGSLGKYS 223
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHI-GIASNFTFEDIVMNNVENPIVIDQLYC 263
+E V LT++NCT T+NG+R+KTWP + I + N FEDI+M NV NPI+I Q YC
Sbjct: 224 NEESVEDLTIKNCTLKNTNNGLRIKTWPSTPITSLVPNLHFEDIIMINVNNPIIIGQEYC 283
Query: 264 PYNKCNI 270
P+N+C+I
Sbjct: 284 PWNQCSI 290
>gi|449463751|ref|XP_004149595.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
gi|449520777|ref|XP_004167409.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
Length = 360
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 124/368 (33%), Positives = 178/368 (48%), Gaps = 88/368 (23%)
Query: 32 FGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPP-GKYLVSFAEFEGPCKASISFQLQ 90
FGA D ITD+SKA ++W EA +G G VL+P G++LV +GPC I QL
Sbjct: 3 FGAKPDAITDNSKALSSAWSEACTNNG-GGIVLIPAKGRFLVLPLLLQGPCHGFIRIQLD 61
Query: 91 GLL------------DLFSIDTSLSL---AKGTFHGQGETAWPLNQCHKNSDCQLPTPIR 135
G L SID +L G+ G+G TAWP ++ P +R
Sbjct: 62 GELLAPLDEHFATGDYWLSIDQVNNLFIDGLGSLDGRGSTAWPSTSHNR------PVSMR 115
Query: 136 FNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----------------- 178
N +N++ IT IKS +S+ FH + GC ++ + + + A A+S
Sbjct: 116 LNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGINIM 175
Query: 179 ----------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCT 222
SK I ++ + CGPG GIS+GSLGK +E+V +TVR+ TF T
Sbjct: 176 HSTIGTGDDCISLGPGSKFINITNIQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFIGT 235
Query: 223 SNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNIEIG 282
SNGVR+KTW S+ + S TF ++ MNNV+NPI+IDQ YCP C + S ++I
Sbjct: 236 SNGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCP-GSCGSQKMMSKSMVQI- 293
Query: 283 NRNLVYNGV----NVKVE-------------------------GPETTSLCSNVKPTLFG 313
+++ Y G+ N +V G TTS C NV+ + FG
Sbjct: 294 -KDVRYEGIRGSSNTQVAVDFECSEVVPCQGIVLQDINLPFNGGGRTTSNCHNVRGSAFG 352
Query: 314 KQIPATCV 321
Q+P +C+
Sbjct: 353 HQLPPSCL 360
>gi|365769173|gb|AEW90949.1| polygalacturonase R2-7 [Secale cereale x Triticum durum]
Length = 415
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 165/333 (49%), Gaps = 56/333 (16%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKA-SIS 86
++ GA DG TD +K + +W A G K T+++P G +L F GPCK ++
Sbjct: 46 DIAKLGAKPDGKTDCTKEVEEAWASACGGTG-KQTIVIPKGDFLTGALNFTGPCKGDGVT 104
Query: 87 FQLQGLL--------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LP 131
+L+G L ++ + + KG GQG+ W N C KN +C+ LP
Sbjct: 105 IKLEGNLLASNDLAKFKSNWIEIMRVKNLVITGKGNIDGQGKAVWTKNSCQKNYNCKILP 164
Query: 132 TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------- 178
+ +F +D+ I GI ++S++FH+NI C + + D+K++A DS
Sbjct: 165 NSLVLDFCDDALIEGISIINSKFFHMNIYECKGVTVKDVKVSAPGDSPNTDGIHMGDSSN 224
Query: 179 --------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCT 218
+K + +S V CGPG GIS+GSLG+ +++V +TV+NC
Sbjct: 225 VSIIDTTIGVGDDCISIGPGTKQVNISGVTCGPGHGISIGSLGRYKDEKDVTDITVKNCV 284
Query: 219 FTCTSNGVRVKTWPDSHIG-IASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMP 277
++NG+R+K++ D+ IAS T+E+I M++ PI+IDQ YCP C K +
Sbjct: 285 LKGSTNGLRIKSYEDAKSPLIASKITYENIKMDDSGYPIIIDQKYCPNKLCTSKGDSARV 344
Query: 278 NIEIGNRNLVYNGVNVKVEGPETTS-LCSNVKP 309
+ +++ + + PE S LCS+ KP
Sbjct: 345 TV----KDVTFKNITGTSSSPEAVSLLCSDKKP 373
>gi|242053095|ref|XP_002455693.1| hypothetical protein SORBIDRAFT_03g021050 [Sorghum bicolor]
gi|241927668|gb|EES00813.1| hypothetical protein SORBIDRAFT_03g021050 [Sorghum bicolor]
Length = 413
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 160/332 (48%), Gaps = 55/332 (16%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
++ GA DG TD +KA +W A G TVL+P G YLV F GPCK +I+
Sbjct: 46 FDISKLGATGDGKTDSTKAVQDAWTSACRATG-SATVLIPKGDYLVGPLNFVGPCKGAIT 104
Query: 87 FQLQGLL--------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPT 132
QL G L +L +D + GT GQG + + + +P
Sbjct: 105 IQLDGNLLGSNDLAKYKASWIELSHVDNIVMTGSGTLDGQGTAVY--KKAKTGTVKAMPN 162
Query: 133 PIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD--------------- 177
+ ++ + T++GIK ++S++FHINI N+ + D+ ITA D
Sbjct: 163 TLVLFYVTNGTVSGIKLLNSKFFHINIDASKNITVKDVNITAPGDVENTDGVHVGMSTKV 222
Query: 178 ------------------SSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTF 219
S ++V+ + CGPGQGIS+G LG+ +++V +TVR+C
Sbjct: 223 SITNSTIGTGDDCISVGPGSDGVMVNNIICGPGQGISIGCLGRYKDEKDVTDVTVRDCVL 282
Query: 220 TCTSNGVRVKTWPDSH-IGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPN 278
T+NGVR+K++ D+ + AS+ TFE+I M V NPI+IDQ +CP C K DS
Sbjct: 283 KKTTNGVRIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPEKVCPGKKSDSSHV 342
Query: 279 IEIGNRNLVYNGVNVKVEGPETTS-LCSNVKP 309
I +++ + + P+ S LCS +P
Sbjct: 343 IV---KDVTFRNITGTSSTPQAISLLCSQSQP 371
>gi|15220596|ref|NP_172056.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|4836915|gb|AAD30617.1|AC007153_9 putative polygalacturonase [Arabidopsis thaliana]
gi|332189750|gb|AEE27871.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 394
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 157/312 (50%), Gaps = 50/312 (16%)
Query: 4 AARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTV 63
A F L+ + +T + + + V NV FGA DG+TD + AF +W+ A TV
Sbjct: 5 AITFPLIFTLLTFIDVSSSASIVFNVVSFGAKPDGVTDSTAAFLKAWQGACG-SAASATV 63
Query: 64 LVPPGKYLVSFAEFEGPCKASISFQLQGLLD---------------LFSIDTSLSLAKGT 108
+VP G +L+ F GPCK+ I+FQ+ G + LF+ SL GT
Sbjct: 64 VVPTGTFLLKVITFGGPCKSKITFQVTGTVVAPEDYRTFGNSGSWILFNKVNRFSLVGGT 123
Query: 109 FHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLN 168
F +G W + +N + + I FN D I+G+KS++S+ H+ + GC N+ +
Sbjct: 124 FDARGSGFWSCRKSGQNCPPGVRS-ISFNSAKDVIISGVKSMNSQVSHMTLNGCTNVAVR 182
Query: 169 DLKITAHADS---------------------------------SKDILVSEVFCGPGQGI 195
++++ A DS +++ L+S++ CGPG G+
Sbjct: 183 NIRLVAPGDSPNTDGFTVQFSTGVTLTGSTVQTGDDCVAIGQGTRNFLISKLACGPGHGV 242
Query: 196 SVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENP 255
S+GSL K + ++ V +TV + FT + NGVR+K+W G N F++++M NV+NP
Sbjct: 243 SIGSLAKQLNEDGVENVTVSSSVFTGSQNGVRIKSWARPSTGFVRNVFFQNLIMRNVQNP 302
Query: 256 IVIDQLYCPYNK 267
I+IDQ YCP N+
Sbjct: 303 IIIDQNYCPSNQ 314
>gi|125555668|gb|EAZ01274.1| hypothetical protein OsI_23298 [Oryza sativa Indica Group]
Length = 365
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 159/328 (48%), Gaps = 56/328 (17%)
Query: 32 FGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQG 91
G DG TD +KA D +W+ A G K T++ P G ++ F GPC I QL G
Sbjct: 3 LGGKGDGKTDSTKAVDEAWKAACAGTG-KQTIVFPKGDFVTGPLNFTGPCNGDIVIQLDG 61
Query: 92 LL--------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LPTPIRF 136
L ++ +D KG GQG W N C K DC+ LP +
Sbjct: 62 NLLGSTDLALFKVNWMEIKRVDNLEISGKGKIDGQGAAVWSKNTCAKKYDCKILPNILVL 121
Query: 137 NFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------------ 178
+F+N+ ++GI V+ ++FH+N+ C N+ + DL ITA DS
Sbjct: 122 DFVNNGLVSGISLVNPKFFHMNMFKCKNITIKDLTITAPEDSPNTDDIHMGDSSKISIID 181
Query: 179 ---------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTS 223
++ + +S V CGPG GISVGSLG+ +++V +TV+NC ++
Sbjct: 182 TVIGTGDDCISIGPGTEGVNISSVTCGPGYGISVGSLGRYKDEKDVTDVTVKNCVLKKST 241
Query: 224 NGVRVKTWPD-SHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNIEIG 282
NGVR+K++ D + + AS FT+E+I M +V NPI+ID YCP C + N ++
Sbjct: 242 NGVRIKSYEDAASVLTASKFTYENIKMEDVANPIIIDTKYCPNKICT-----ANGNSKVT 296
Query: 283 NRNLVYNGVNVKVEGPETTSL-CSNVKP 309
+++ + + PE SL CS+ P
Sbjct: 297 IKDITFKNITGTSSTPEAVSLFCSDKLP 324
>gi|449502091|ref|XP_004161540.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 458
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 124/372 (33%), Positives = 172/372 (46%), Gaps = 78/372 (20%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKA-S 84
V +V GA ADG TDD++AF+T+W A +L+P G YLV GPCK+
Sbjct: 88 VFDVTKHGAKADGKTDDAQAFETTWIAACRNTVGPVKILIPKGTYLVGPMTLAGPCKSFP 147
Query: 85 ISFQLQGLL------------DLFSID--TSLSL-AKGTFHGQGETAWPLNQCHKNSDCQ 129
I+ + QG + + FSI+ T L G F GQG W N C N DCQ
Sbjct: 148 ITIENQGTVKATTDLSEYSSPEWFSIEDITGFILTGSGVFDGQGTAVWAYNDCKSNKDCQ 207
Query: 130 L-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADS 178
L P I+F+ LN + + GI S++S+ FH+++ CYN + ++ I A H +
Sbjct: 208 LLPISIKFSGLNHTIVDGITSLNSKGFHMSLFNCYNFTITNVNIIAPDESPNTDGIHLST 267
Query: 179 SK-----------------------DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVR 215
S+ I V+ V CGPG G+SVGSLGK ++++V + V+
Sbjct: 268 SELVNIMNSIIGTGDDCVSIGHSTVKITVTNVTCGPGHGLSVGSLGKYSREKDVYDVLVK 327
Query: 216 NCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDS 275
NCT +NG R+KT+ G+AS FEDI+M NV+ PI+IDQ Y K K S
Sbjct: 328 NCTIFNATNGARIKTFASPISGLASGIIFEDIIMYNVKYPIIIDQTYSTDENKESKWKVS 387
Query: 276 ------------------------MP--NIEIGNRNLVYNGVNVKVEGPETTSLCSNVKP 309
+P + + + NL Y G + K S C N K
Sbjct: 388 DVHFKNIRGTSATNVGVLLECSKLLPCEGVVLKDINLTYGGTDSK--NTTIVSSCLNAKI 445
Query: 310 TLFGKQIPATCV 321
T G Q P CV
Sbjct: 446 TTIGVQNPPPCV 457
>gi|225217013|gb|ACN85300.1| exopolygalacturonase precursor [Oryza coarctata]
Length = 413
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 164/333 (49%), Gaps = 56/333 (16%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
++ GA+A+G D SKA +W+ A G K T+++P G ++ +F GPCK ++
Sbjct: 46 FDITKLGAIANGRADSSKAVMEAWKAACGGAG-KQTIVIPRGDFMTGQLDFTGPCKGDVT 104
Query: 87 FQLQGLL--------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LP 131
QL G L + +D + KGT GQG W N C KN +C+ LP
Sbjct: 105 VQLDGNLLGSNDLSKYKANWIEFRKVDNLVIAGKGTLDGQGPGVWSKNSCAKNYNCKILP 164
Query: 132 TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------- 178
+ N + + ++GI D+++FH+N+ C + ++ ITA +S
Sbjct: 165 NTLVLNSVKNGLVSGITLKDAKFFHMNMFRCKGVTISGGTITAPEESPNTDGIHMGDSSK 224
Query: 179 --------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCT 218
S+ I ++ V CGPG GISVGSLG+ +++V +TV++C
Sbjct: 225 IAIVGTTIGTGDDCISIGPGSEGITITGVTCGPGHGISVGSLGRYKDEKDVKDITVKDCV 284
Query: 219 FTCTSNGVRVKTWPDSHIGI-ASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMP 277
TSNGVR+K++ D+ I AS T+E+I M +V NPI+IDQ YCP C S
Sbjct: 285 LKNTSNGVRIKSYEDAISPITASKLTYENIKMEDVANPIIIDQKYCPNKICT-----SKG 339
Query: 278 NIEIGNRNLVYNGVNVKVEGPETTS-LCSNVKP 309
N ++ +++ + + PE S LCS+ P
Sbjct: 340 NSKVSIKDVTFKNITGTSSTPEAVSLLCSDKLP 372
>gi|15220038|ref|NP_173158.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|332191430|gb|AEE29551.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 402
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 121/401 (30%), Positives = 191/401 (47%), Gaps = 87/401 (21%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK 60
+ +A LL+ +T+ R I +V +V+ +GA DG D++ AF +W++A W+G
Sbjct: 8 VFMAFGLLLLLIAVTTSRPITRP-KVFDVRSYGAKGDGKMDNTNAFTNAWKDACRWNG-P 65
Query: 61 GTVLVPPGKYLVSFAEFEGPCKASISFQLQGLL---------------DLFSIDTSLSLA 105
+ +P G + + F GPC ISF + G L + I+
Sbjct: 66 SKMYIPLGTFYLGGVTFVGPCDGKISFVIDGTLLAPPNNDDIKKEIWINFRYINYLTVFG 125
Query: 106 KGTFHGQGETAWPLNQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYN 164
GT GQG+ +W L C K+++C +L + F+F+ +S++ GI S++S+ H N L +
Sbjct: 126 DGTLDGQGKKSWSLIDCQKDNNCPKLAINMGFDFVKNSSMNGITSLNSKAGHFNFLSVDH 185
Query: 165 LKLNDLKITAHADS----------SKDILVSE-----------------------VFCGP 191
+ + I A ++S S ++ +S V CGP
Sbjct: 186 FSITRVNIIAPSNSPNTDGIKIALSSNMQISNTHISTGDDCIAMLSGNTNFDIYNVKCGP 245
Query: 192 GQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIA-SNFTFEDIVMN 250
G GIS+GSLGK ++ V GL VRN FT T+NG+R+KTW S I N +E++ M
Sbjct: 246 GHGISIGSLGKNKDEKNVNGLMVRNSVFTGTTNGIRIKTWESSASTIRIINLVYENLQMI 305
Query: 251 NVENPIVIDQLYCPYNKC-----------NIKPKD-----------------SMP--NIE 280
NVENPI IDQ YCPY C N+ K+ + P +++
Sbjct: 306 NVENPIGIDQKYCPYPPCSNMGDSHIQIRNVTLKNIWGTSKNKVAVKFQCSKTFPCKDVQ 365
Query: 281 IGNRNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 321
+ + NL ++G V+GP ++LC NV + GK +P C+
Sbjct: 366 LIDINLTHHG----VDGP-ASALCENVDGSATGKMVPPHCL 401
>gi|186511744|ref|NP_193112.2| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|332657922|gb|AEE83322.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 404
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 121/393 (30%), Positives = 181/393 (46%), Gaps = 80/393 (20%)
Query: 9 LLVSFITSVRGIDATNR--VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP 66
L VSF+ V T R + NV+ G+ +DG TD++ F + W A + VP
Sbjct: 11 LCVSFLFIVVASRPTIRPKMFNVQRHGSKSDGKTDNTNVFTSVWNRACRRKSGSSKIYVP 70
Query: 67 PGKYLVSFAEFEGPCKASISFQLQGLLDL--------------FSIDTSLSLA-KGTFHG 111
G + + EF GPCK I F + G L F LS++ GT G
Sbjct: 71 KGTFYLGGVEFVGPCKNPIEFLIDGTLLAPANPNNIKQDTWIKFKYINDLSISGSGTLDG 130
Query: 112 QGETAWPLNQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
QG+ +WPLN CHKN +C +L + F F+N+S I I S++S+ H N ++ + +
Sbjct: 131 QGKQSWPLNDCHKNPNCPKLAMTMGFAFVNNSNIKDITSLNSKMGHFNFFSVHHFNITGV 190
Query: 171 KITAHADS---------------------------------SKDILVSEVFCGPGQGISV 197
ITA +S + ++ +S V CGPG GISV
Sbjct: 191 TITAPGNSPNTDGIKMGSCSNIHISNTNIGTGDDCIAILSGTTNLDISNVNCGPGHGISV 250
Query: 198 GSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGI-ASNFTFEDIVMNNVENPI 256
GSLGK +++V LT+R+ F TS+G+R+KTW S I SNF +E+I M +V PI
Sbjct: 251 GSLGKNKDEKDVKDLTIRDVIFNGTSDGIRIKTWESSASKILVSNFLYENIQMIDVGKPI 310
Query: 257 VIDQLYCPYNKCNIKPKD----SMPNIEIGN---------------------RNLVYNGV 291
IDQ YCP+ C + K + N+++ N +N+ +
Sbjct: 311 NIDQKYCPHPPCEHEQKGESHVQIQNLKLKNIYGTSKNKVAVNLQCSKRFPCKNIELIDI 370
Query: 292 NVKVEG---PETTSLCSNVKPTLFGKQIPATCV 321
N+ G +T +C NV ++ GK +P C+
Sbjct: 371 NITNNGLVDSFSTLVCENVDGSVSGKMVPQHCI 403
>gi|258640142|gb|ACV85697.1| ripening-induced polygalacturonase 4 [Carica papaya]
Length = 389
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 149/293 (50%), Gaps = 49/293 (16%)
Query: 23 TNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCK 82
+ R NV +GA DG+TD +KAF +W EA + T+ VP GK+L+ A F+G CK
Sbjct: 35 STRTFNVVHYGAKPDGLTDSTKAFIAAWHEACSSIN-PATIYVPVGKFLLHNAVFQGKCK 93
Query: 83 ASISFQLQGLLD--------------LFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDC 128
+IS +++G L LF +S+ G GQG + W + HK
Sbjct: 94 NNISIRIEGTLVAPPYKVTKFFENWVLFEGVNGVSIFGGILDGQGASLWACKKSHKGCP- 152
Query: 129 QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---------- 178
+ T +RF ++ + G+ SV+S+ +HI I YN+K+ K++A DS
Sbjct: 153 KGATTLRFKRSSNIELNGVTSVNSQLYHIVIEESYNVKVQGAKVSASGDSPNTDGIHVQL 212
Query: 179 SKDILV-----------------------SEVFCGPGQGISVGSLGKGIKDEEVVGLTVR 215
SKDI + + CGPG GIS+GSLGK +K+ V +TV+
Sbjct: 213 SKDITIFDSRIATGDDCISVGPGTTNLWIENIACGPGHGISIGSLGKELKEAGVEDVTVK 272
Query: 216 NCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
+ + T NG+R+KTW G A N F+++VMN V+NPI+IDQ YCP C
Sbjct: 273 SVRLSGTKNGLRIKTWGRPSSGYARNIHFQNVVMNKVKNPIIIDQQYCPDKHC 325
>gi|15220597|ref|NP_172057.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|4836916|gb|AAD30618.1|AC007153_10 putative polygalacturonase [Arabidopsis thaliana]
gi|332189751|gb|AEE27872.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 394
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 158/310 (50%), Gaps = 50/310 (16%)
Query: 6 RFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLV 65
RFSLL + +T + + + V NV FGA DG+TD + AF +W+ A TV+V
Sbjct: 7 RFSLLFTLLTFIDVSISASNVFNVVSFGAKPDGVTDSTGAFLKAWQGAC-VSASSATVVV 65
Query: 66 PPGKYLVSFAEFEGPCKASISFQLQGLLD---------------LFSIDTSLSLAKGTFH 110
P G +L+ F GPCK+ I+FQ+ G + LF+ SL GTF
Sbjct: 66 PKGTFLLKVITFGGPCKSKITFQVAGTVIAPEDYRTFGNSGFWILFNKVNRFSLVGGTFD 125
Query: 111 GQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
+ W + +N + + I FN D I+G+KS++S+ H+ + GC N+ + ++
Sbjct: 126 ARANGFWSCRKSGQNCPPGVRS-ISFNSAKDVIISGVKSMNSQVTHMTLNGCTNVVVRNV 184
Query: 171 KITAHADS---------------------------------SKDILVSEVFCGPGQGISV 197
K+ A +S ++++L++++ CGPG G+S+
Sbjct: 185 KLVAPGNSPNTDGFHVQHSTGVTFTGSTVQTGDDCVAIGPGTRNLLITKLACGPGHGVSI 244
Query: 198 GSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIV 257
GSL K +K++ V +TV + FT + NGVR+K+W G F+D+VM NVENPI+
Sbjct: 245 GSLAKELKEDGVENVTVSSSVFTGSQNGVRIKSWARPSNGFVRTVFFQDLVMKNVENPII 304
Query: 258 IDQLYCPYNK 267
IDQ YCP ++
Sbjct: 305 IDQNYCPTHE 314
>gi|326531262|dbj|BAK04982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 417
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 165/335 (49%), Gaps = 60/335 (17%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
+ ++ GA +DG TD SK +W+ A + TVLVP G++LV F GPCK +
Sbjct: 50 IFDITKLGATSDGKTDCSKEIQEAWKSACGA-AEQATVLVPKGEFLVGPLNFSGPCKGDV 108
Query: 86 SFQLQGLL---------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQ- 129
Q+ G L ++ ++ + GT GQG + K+ + Q
Sbjct: 109 KIQIDGTLLGTNDLPKYDGGSWINILKVENLVITGSGTIDGQGTNVY-----TKDPEAQA 163
Query: 130 LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----------- 178
P + +F+ + T++GI ++S++FHINI ++K+ +L ITA +S
Sbjct: 164 FPNSLVLDFVKNGTVSGITLLNSKFFHINIYKSEDVKVENLTITAPGNSPNTDGIHIGDS 223
Query: 179 ----------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRN 216
S I V+ V CGPGQGISVG LG+ +++V +TV++
Sbjct: 224 SNINVTGATIGTGDDCISIGGGSSRIRVTRVTCGPGQGISVGCLGRYKDEKDVSDVTVKD 283
Query: 217 CTFTCTSNGVRVKTWPDSHIGI-ASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDS 275
C ++NGVR+KT+ D+ I ASN TFE+I M +V NPI+IDQ YCP C K K
Sbjct: 284 CVLRSSTNGVRIKTYEDAVKSITASNLTFENIKMEDVANPIIIDQNYCPEKVCTAKSKSK 343
Query: 276 MPNIEIGNRNLVYNGVNVKVEGPETTS-LCSNVKP 309
+ +++++ + PE S LCS+ +P
Sbjct: 344 SA---VTVKDVIFRNITGTSSTPEAVSLLCSDKQP 375
>gi|338930674|emb|CBM42661.1| group 13 grass pollen allergen [Paspalum notatum]
Length = 391
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
++ GA DG TD +KA + +W A G K T+L+P G YL F GPC ++
Sbjct: 52 FDITKLGASGDGKTDSTKALEEAWASACGGKG-KQTILIPKGDYLTGALNFTGPCTGDVT 110
Query: 87 FQLQGLL--------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LP 131
FQL G L ++ +D + KG GQG W N C K DC+ LP
Sbjct: 111 FQLDGNLLASTDLSQFKANWIEILRVDNLVITGKGKLDGQGSAVWSKNSCAKKYDCKILP 170
Query: 132 TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------- 178
+ +F N + ++GI ++S++FH+N+ C ++ + D+ ++A DS
Sbjct: 171 NSLVLDFCNKAEVSGISIINSKFFHMNVFQCKDVVIKDVTVSAPGDSPNTDGIHMGDSSG 230
Query: 179 --------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCT 218
S + ++ V CGPG GIS+GSLG+ +++V + V++CT
Sbjct: 231 VSIIDTTIGVGDDCISIGPGSTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCT 290
Query: 219 FTCTSNGVRVKTWPDSH-IGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMP 277
+SNG+R+K + D+ + SN +E++ M + PI+ID YCP C+ +
Sbjct: 291 LKKSSNGLRIKAYEDAKSVLTCSNIHYENVKMEDAGYPIIIDMKYCPNKICS-----ASA 345
Query: 278 NIEIGNRNLVYNGVNVKVEGPETTS-LCSNVKP 309
++ +++ + + PE S LCS+ P
Sbjct: 346 GSKVTVKDVTFKDITGTSSTPEAVSLLCSDSTP 378
>gi|357138996|ref|XP_003571072.1| PREDICTED: exopolygalacturonase-like [Brachypodium distachyon]
Length = 418
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 167/333 (50%), Gaps = 56/333 (16%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
L++ GA DG TD ++A +W+ A G++ +++PPG +L+ EGPC +SI
Sbjct: 50 LDIVLLGAKGDGKTDATEAVQKAWKNACAATGVQ-KIIIPPGNFLIGALALEGPCTSSII 108
Query: 87 FQLQGLL--------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LP 131
+L G L ++ +D GT GQG W NQC+KN +C+ LP
Sbjct: 109 IRLDGNLLGTGDLNAYKKNWIEVMHVDNFAINGHGTIDGQGPLVWQKNQCNKNYNCKILP 168
Query: 132 TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------- 178
+ +++ +++I G+ ++++FH+N+ C N+ ++ + ITA DS
Sbjct: 169 NSLVLDYVTNASIRGVTLKNAKFFHMNLFNCKNVVVDKVNITAPGDSPNTDGIHMGDSDN 228
Query: 179 --------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCT 218
++ + V CGPG GISVGSLG+ ++ V + V NCT
Sbjct: 229 ITITNTNIGVGDDCISIGPGTQRVRVHGSRCGPGHGISVGSLGRYKDEKNVEDIQVTNCT 288
Query: 219 FTCTSNGVRVKTWPDSH-IGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMP 277
+NG+R+K++ DS + AS F ++ IVM+NV PIVIDQ YCP N CN K+
Sbjct: 289 IKGATNGLRIKSYEDSKSVLKASRFVYDQIVMDNVSFPIVIDQKYCPNNICN---KNGQS 345
Query: 278 NIEIGNRNLVYNGVNVKVEGPETTSL-CSNVKP 309
+ I +++V+ + PE +L C N P
Sbjct: 346 TVTI--QDIVFKNIVGTSATPEAVTLNCPNNLP 376
>gi|338930672|emb|CBM42660.1| group 13 grass pollen allergen [Paspalum notatum]
Length = 395
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 159/333 (47%), Gaps = 56/333 (16%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
++ GA DG TD +KA + +W A G K T+L+P G YL F GPC ++
Sbjct: 56 FDITKLGASGDGKTDSTKALEEAWASACGGKG-KQTILIPKGDYLTGALNFTGPCTGDVT 114
Query: 87 FQLQGLL--------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LP 131
FQL G L ++ +D + KG GQG W N C K DC+ LP
Sbjct: 115 FQLDGNLLASTDLSQFKANWIEILRVDNLVITGKGKLDGQGSAVWSKNSCAKKYDCKILP 174
Query: 132 TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------- 178
+ +F N + ++GI ++S++FH+N+ C ++ + D+ ++A DS
Sbjct: 175 NSLVLDFCNKAEVSGISIINSKFFHMNVFQCKDVVIKDVTVSAPGDSPNTDGIHMGDSSG 234
Query: 179 --------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCT 218
S + ++ V CGPG GIS+GSLG+ +++V + V++CT
Sbjct: 235 VSIIDTTIGVGDDCISIGPGSTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCT 294
Query: 219 FTCTSNGVRVKTWPDSH-IGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMP 277
+SNG+R+K + D+ + SN +E++ M + PI+ID YCP C+ +
Sbjct: 295 LKKSSNGLRIKAYEDAKSVLTCSNIHYENVKMEDAGYPIIIDMKYCPNKICS-----ASA 349
Query: 278 NIEIGNRNLVYNGVNVKVEGPETTS-LCSNVKP 309
++ +++ + + PE S LCS+ P
Sbjct: 350 GSKVTVKDVTFKDITGTSSTPEAVSLLCSDSTP 382
>gi|356501890|ref|XP_003519756.1| PREDICTED: exopolygalacturonase clone GBGE184-like [Glycine max]
Length = 416
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/379 (30%), Positives = 169/379 (44%), Gaps = 90/379 (23%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKAS- 84
+ +V FGAVAD TD+ AF +W EA + VL+P G + + F GPC +
Sbjct: 44 IFDVTKFGAVADDQTDNIDAFRAAWGEACKNSTTQAKVLIPAGTFRAAQTMFAGPCTSPK 103
Query: 85 -ISFQLQGLL---------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKN-SD 127
I ++ G + ID + G F GQG +WP N C K D
Sbjct: 104 PIIVEVIGTVKANTDPSEYVTPEWFSFLDIDGLVLTGNGVFDGQGAASWPYNDCAKTKGD 163
Query: 128 CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-------- 178
C LP ++F +N+S +T I S++S FH +I GC N L+++ ITA +S
Sbjct: 164 CAPLPASLKFAKVNNSIVTDITSLNSMQFHFHIHGCSNFSLSNINITAPGNSPNTDGMHI 223
Query: 179 -------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLT 213
+ +I ++ + CGPG GISVGSLGK ++ V G++
Sbjct: 224 SSSDSIKVFDSVIGTGDDCISIGHSTTNIAITNITCGPGHGISVGSLGKRPEERSVNGIS 283
Query: 214 VRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK------ 267
V NCTF T+NG R+KTW + A+N T+E ++M V+NPI+IDQ Y K
Sbjct: 284 VTNCTFVNTTNGARIKTWMGTVPAEATNITYEGLIMKGVQNPIIIDQSYGSNKKTTPSTS 343
Query: 268 ---------------------CNIKPKDSMP--NIEIGNRNLVYNGVNVKVEGPETTSL- 303
+++ S P +EI + +L Y+G GP T+
Sbjct: 344 VWKISNIHFRKIQGTTVSNIAVSLQCSTSNPCEGVEIADVDLAYSG------GPHNTTFV 397
Query: 304 --CSNVKPTLFGKQIPATC 320
CSN K G P C
Sbjct: 398 SSCSNAKAVFGGILNPPAC 416
>gi|15218607|ref|NP_171778.1| polygalacturonase 4 [Arabidopsis thaliana]
gi|1346701|sp|P49062.1|PGLR1_ARATH RecName: Full=Exopolygalacturonase clone GBGE184; Short=ExoPG;
AltName: Full=Galacturan 1,4-alpha-galacturonidase;
AltName: Full=Pectinase; Flags: Precursor
gi|6056424|gb|AAF02888.1|AC009525_22 exopolygalacturonase [Arabidopsis thaliana]
gi|16226535|gb|AAL16194.1|AF428425_1 At1g02790/T14P4_2 [Arabidopsis thaliana]
gi|313682|emb|CAA51032.1| exopolygalacturonase [Arabidopsis thaliana]
gi|3004440|emb|CAA76127.1| polygalacturonase [Arabidopsis thaliana]
gi|17528952|gb|AAL38686.1| putative polygalacturonase [Arabidopsis thaliana]
gi|22136804|gb|AAM91746.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332189349|gb|AEE27470.1| polygalacturonase 4 [Arabidopsis thaliana]
Length = 422
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/315 (33%), Positives = 160/315 (50%), Gaps = 54/315 (17%)
Query: 1 LLLAARFSLLVS---FITSVRGIDATN---RVLNVKDFGAVADGITDDSKAFDTSWREAW 54
+L+A F V+ ++ RG+ A + V ++ FGAV DG T+ KAF +W +
Sbjct: 20 ILMALVFGSCVANGEYLGGRRGLAANSGNPTVYDITKFGAVGDGSTNTFKAFLNTWIQVC 79
Query: 55 NWDGIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLLD------------LFS-IDTS 101
+ + T+LVP G +L F GPCK+ ++ + G + LF +D
Sbjct: 80 D-SPVPATLLVPKGTFLAGPVIFAGPCKSKVTVNVIGTIIATTSGYATPEWFLFERVDNL 138
Query: 102 LSLAKGTFHGQGETAWPLNQCHKNSDCQLP-TPIRFNFLNDSTITGIKSVDSRYFHINIL 160
+ GTFHG+GE W + C K C LP T ++F + + I GI SV+++ FH+ ++
Sbjct: 139 VLTGTGTFHGKGEAVWKADGCGKKVQCNLPPTSLKFRNMKNVEINGISSVNAKAFHMFLV 198
Query: 161 GCYNLKLNDLKITAHADS---------------------------------SKDILVSEV 187
N+ + ++K+TA A+S S ++ V V
Sbjct: 199 KTENVNIQNIKLTAPAESPNTDGIHLSNADNVSILDSTIATGDDCVSVGRGSNNVTVERV 258
Query: 188 FCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDI 247
CGPG G+SVGSLGK +E+V G+ V NCT T NG+R+KTW S A + FE+I
Sbjct: 259 ICGPGHGLSVGSLGKYKNEEDVSGIHVNNCTMIETDNGLRIKTWGGSDPSKAVDIKFENI 318
Query: 248 VMNNVENPIVIDQLY 262
+M +V+NPI+IDQ Y
Sbjct: 319 IMQSVKNPIIIDQNY 333
>gi|2832691|emb|CAA16789.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 362
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 153/290 (52%), Gaps = 51/290 (17%)
Query: 45 AFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCK--ASISFQLQGLLDL------- 95
AF +W +A +++P G++ V F GPC ++++ +++ DL
Sbjct: 1 AFVAAWDKACKSSSSSVNLIIPRGEFSVGSLRFSGPCTNVSNLTVRVKASTDLSKYRSGG 60
Query: 96 ----FSIDTSLSL-AKGTFHGQGETAWPLNQCHKNSDCQL-PTPIRFNFLNDSTITGIKS 149
F L+L GTF GQG AWP N C +S+C+L PT ++F +N + + I S
Sbjct: 61 GWIQFGWINGLTLTGGGTFDGQGALAWPFNNCTSDSNCKLLPTSLKFVGMNRTVVRRISS 120
Query: 150 VDSRYFHINILGCYNLKLNDLKITAHADS------------------------------- 178
V+S++FHI ++ C + K L ITA +DS
Sbjct: 121 VNSKFFHIALVECRDFKGTRLNITAPSDSPNTDGIHIERSSNVYFSRSHIATGDDCVSIG 180
Query: 179 --SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDS-H 235
+ I ++ + CGPG GISVGSLG+ +++V GL V++C + T+NG+R+KTW +S
Sbjct: 181 QGNSQITITSIKCGPGHGISVGSLGRYPNEKDVNGLVVKDCKISGTTNGIRIKTWANSPG 240
Query: 236 IGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC--NIKPKDSMPNIEIGN 283
+ A+N TFE+I+MNNV NPI+IDQ YCP++ C N+ K + I N
Sbjct: 241 LSAATNMTFENIIMNNVTNPIIIDQSYCPFSSCISNVPSKVELSEIYFKN 290
>gi|338930678|emb|CBM42663.1| group 13 grass pollen allergen [Paspalum notatum]
Length = 393
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 160/333 (48%), Gaps = 56/333 (16%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
++ GA DG TD +KA + +W A G K T+L+P G YL F GPC ++
Sbjct: 54 FDITKLGASGDGKTDSTKALEEAWASACGGKG-KQTILIPKGDYLTGALNFTGPCTGDVT 112
Query: 87 FQLQGLL--------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LP 131
FQL G L ++ +D + KG GQG+ W N C K DC+ LP
Sbjct: 113 FQLDGNLLASTDLSQFKANWIEILRVDNLVITGKGKLDGQGQAVWSKNSCAKKYDCKILP 172
Query: 132 TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------- 178
+ +F N + ++GI ++S++FH+N+ C ++ + D+ ++A DS
Sbjct: 173 NSLVLDFCNKAEVSGISIINSKFFHMNVFQCKDVVIKDVTVSAPGDSPNTDGIHMGDSSG 232
Query: 179 --------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCT 218
S + ++ V CGPG GIS+GSLG+ +++V + V++CT
Sbjct: 233 VSIIDTTIGVGDDCISIGPGSTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCT 292
Query: 219 FTCTSNGVRVKTWPDSH-IGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMP 277
++NG+R+K + D+ + SN +E++ M + PI+ID YCP C+ +
Sbjct: 293 LKKSTNGLRIKAYEDAKSVLTCSNIHYENVKMEDAGYPIIIDMKYCPNKICS-----ASA 347
Query: 278 NIEIGNRNLVYNGVNVKVEGPETTS-LCSNVKP 309
++ +++ + + PE S LCS+ P
Sbjct: 348 GSKVTVKDVTFKDITGTSSTPEAVSLLCSDSTP 380
>gi|338930676|emb|CBM42662.1| group 13 grass pollen allergen [Paspalum notatum]
Length = 393
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 160/333 (48%), Gaps = 56/333 (16%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
++ GA DG TD +KA + +W A G K T+L+P G YL F GPC ++
Sbjct: 54 FDITKLGASGDGKTDSTKALEEAWASACGGKG-KQTILIPKGDYLTGALNFTGPCTGDVT 112
Query: 87 FQLQGLL--------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LP 131
FQL G L ++ +D + KG GQG+ W N C K DC+ LP
Sbjct: 113 FQLDGNLLASTDLSQFKANWIEILRVDNLVITGKGKLDGQGQAVWSKNSCAKKYDCKILP 172
Query: 132 TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------- 178
+ +F N + ++GI ++S++FH+N+ C ++ + D+ ++A DS
Sbjct: 173 NSLVLDFCNKAEVSGISIINSKFFHMNVFQCKDVVIKDVTVSAPGDSPNTDGIHMGDSSG 232
Query: 179 --------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCT 218
S + ++ V CGPG GIS+GSLG+ +++V + V++CT
Sbjct: 233 VSIIDTTIGVGDDCISIGPGSTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCT 292
Query: 219 FTCTSNGVRVKTWPDSH-IGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMP 277
++NG+R+K + D+ + SN +E++ M + PI+ID YCP C+ +
Sbjct: 293 LKKSTNGLRIKAYEDAKSVLTCSNIHYENVKMEDAGYPIIIDMKYCPNKICS-----ASA 347
Query: 278 NIEIGNRNLVYNGVNVKVEGPETTS-LCSNVKP 309
++ +++ + + PE S LCS+ P
Sbjct: 348 GSKVTVKDVTFKDITGTSSTPEAVSLLCSDSTP 380
>gi|115437052|ref|NP_001043199.1| Os01g0517500 [Oryza sativa Japonica Group]
gi|56202049|dbj|BAD73578.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113532730|dbj|BAF05113.1| Os01g0517500 [Oryza sativa Japonica Group]
gi|125570605|gb|EAZ12120.1| hypothetical protein OsJ_02002 [Oryza sativa Japonica Group]
Length = 407
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 166/339 (48%), Gaps = 63/339 (18%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPC 81
A N V ++ + GAVADG TD +KA +W A G + V++P G+++ F GPC
Sbjct: 40 AVNTVFDITELGAVADGKTDSTKAVQDAWDAACGLAGSQ-KVVIPKGEFMTGPLNFSGPC 98
Query: 82 KASISFQLQGLL---------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNS 126
K ++ Q+ G + ++ ID L GT GQG W
Sbjct: 99 KGYVTVQIDGTMFGSNDIPKYNKGNWIEILHIDNVLVNGSGTLDGQGAAVW-------KD 151
Query: 127 DCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------- 178
+C+ LP + +++ + T++G+K V++++FHIN+ + + ++ ITA A+S
Sbjct: 152 ECKILPNTLVLDYVKNGTVSGLKLVNAKFFHINVYMSKGVTIKNVTITAVANSPNTDGVH 211
Query: 179 ---SKDILVSE-----------------------VFCGPGQGISVGSLGKGIKDEEVVGL 212
S +I VS+ + CGPGQGISVG LG+ +++V +
Sbjct: 212 IGDSSEISVSDATIATGDDCISVGPGSSRISIQGITCGPGQGISVGCLGRFKDEKDVTDV 271
Query: 213 TVRNCTFTCTSNGVRVKTWPDSHIGI-ASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK 271
TVR+C TSNGVR+K++ D I AS TFE+I M+ V NP+++DQ YCP C K
Sbjct: 272 TVRDCVLRNTSNGVRIKSYEDVLSPITASRLTFENIRMDGVANPVIVDQKYCPEKDCPEK 331
Query: 272 PKDSMPNIEIGNRNLVYNGVNVKVEGPETTS-LCSNVKP 309
I +N+ + + PE S LCS+ P
Sbjct: 332 KGSKTVTI----KNVTFRNITGTSNTPEAVSLLCSDQLP 366
>gi|297848850|ref|XP_002892306.1| hypothetical protein ARALYDRAFT_887757 [Arabidopsis lyrata subsp.
lyrata]
gi|297338148|gb|EFH68565.1| hypothetical protein ARALYDRAFT_887757 [Arabidopsis lyrata subsp.
lyrata]
Length = 394
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/312 (31%), Positives = 155/312 (49%), Gaps = 50/312 (16%)
Query: 4 AARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTV 63
A F LL + +T + + V NV FGA DG+TD + AF +W+ A TV
Sbjct: 5 AITFPLLFTLLTFIDVSSTASNVFNVVSFGAKPDGVTDSTAAFLKAWQRACG-SASSATV 63
Query: 64 LVPPGKYLVSFAEFEGPCKASISFQLQGLLD---------------LFSIDTSLSLAKGT 108
+VP G +L+ F GPCK+ I+FQ+ G + LF+ SL GT
Sbjct: 64 VVPNGTFLLKVITFGGPCKSKITFQVTGTVVAPEDYRTFGNSGYWILFNKVNRFSLVGGT 123
Query: 109 FHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLN 168
F + W + +N + + I FN D I+G+KS++S+ H+ + GC N+ +
Sbjct: 124 FDARANGFWSCRKSGQNCPPGVRS-ISFNSAKDVIISGVKSMNSQVSHMTLNGCTNVVVR 182
Query: 169 DLKITAHADS---------------------------------SKDILVSEVFCGPGQGI 195
++K+ A +S +++ L++++ CGPG G+
Sbjct: 183 NVKLVAPGNSPNTDGFHVQLSTGVTFTGSTVQTGDDCVAIGPGTRNFLITKLACGPGHGV 242
Query: 196 SVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENP 255
S+GSL K + ++ V +TV + FT + NGVR+K+W G N F+D+VM NVENP
Sbjct: 243 SIGSLAKELNEDGVENVTVSSSVFTGSQNGVRIKSWARPSTGFVRNVFFQDLVMKNVENP 302
Query: 256 IVIDQLYCPYNK 267
I+IDQ YCP ++
Sbjct: 303 IIIDQNYCPTHE 314
>gi|356498930|ref|XP_003518299.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Glycine
max]
Length = 387
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 120/371 (32%), Positives = 177/371 (47%), Gaps = 91/371 (24%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
+ +++ +G V + D + A +W A +++P GKY + +F GPCKA I
Sbjct: 20 LFDIRKYGVVPN--LDITMALQKAWTHAC-ASMTTSKIVIPNGKYKLRQIDFMGPCKAPI 76
Query: 86 SFQLQGLL----DLFSIDTS-----------LSLA-KGTFHGQGETAWPLNQCHKN-SDC 128
Q+ GL+ +LF I+ L+L+ GTFHG+G+ AW N C N +C
Sbjct: 77 EVQVNGLIKTPRNLFHINGQEQXVRFGYINFLTLSGNGTFHGRGKMAWKQNNCSANYKNC 136
Query: 129 Q-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNL---------------------- 165
+ L F F+N+ I I DS+YFH+NI GC N+
Sbjct: 137 KKLAMNFGFGFVNNLIIMDITLKDSKYFHVNIFGCKNITFTNFRVSSTTYNPNTDRIHIG 196
Query: 166 KLNDLKIT-----------AHADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTV 214
KL +KIT + D SK++ + V CGP GISVGSL K ++ V L V
Sbjct: 197 KLTQVKITNSQIGTGDDCISLGDGSKEVTILNVTCGPEHGISVGSLEKYSNEDSVEDLIV 256
Query: 215 RNCTFTCTSNGVRVKTWPDSHI-GIASNFTFEDIVMNNVENPIVIDQLYCPYNKC----- 268
+NCT T+NG+R+KTWP + I +AS+ FEDI+M NV NPI+I+Q Y P+N+C
Sbjct: 257 KNCTLKNTNNGLRIKTWPSTLITSLASDXHFEDIIMINVSNPIIINQEYXPWNQCSKQSP 316
Query: 269 -----------NIKPKDSMPN--------------IEIGNRNLVYNGVNVKVEGPETTSL 303
NI+ + +E+ + NL +N + + T+
Sbjct: 317 SKIKISKVTFKNIRGTSATQERITLICSSGVPCETVELSDINLRFNDIIL------ATAK 370
Query: 304 CSNVKPTLFGK 314
C+NVKP GK
Sbjct: 371 CANVKPNFEGK 381
>gi|297823959|ref|XP_002879862.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325701|gb|EFH56121.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 366
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/351 (32%), Positives = 168/351 (47%), Gaps = 68/351 (19%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKAS 84
+V NV+ G+ DG TD++ AF + W A + VP G + + EF GPCK
Sbjct: 29 KVFNVQRHGSKPDGKTDNANAFTSVWSRACRRKSGSSKIYVPKGTFYLGGVEFVGPCKNP 88
Query: 85 ISFQLQGLL-------DL-------FSIDTSLSLA-KGTFHGQGETAWPLNQCHKNSDCQ 129
I F + G L D+ F LS++ GT GQG+ +WPLN CHKN +C
Sbjct: 89 IEFIIDGTLLAPANPSDIKQDTWINFRYINDLSISGSGTLDGQGKQSWPLNDCHKNPNCP 148
Query: 130 LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD------SSKDIL 183
+ F + GIK + C N+ +++ I D + ++
Sbjct: 149 KLAMVTFPPGDSPNTDGIK----------MGSCSNIHISNTNIGTGDDCIAILSGTTNLD 198
Query: 184 VSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGI-ASNF 242
+S V CGPG GISVGSLGK +++V LTVR+ F TS+G+R+KTW S I SNF
Sbjct: 199 ISNVKCGPGHGISVGSLGKNKDEKDVKDLTVRDVFFNGTSDGIRIKTWESSASKILVSNF 258
Query: 243 TFEDIVMNNVENPIVIDQLYCPYNKC------------------------------NIKP 272
+E+I M +V PI IDQ YCP+ C N++
Sbjct: 259 VYENIQMIDVGKPINIDQKYCPHPPCEHEQKGESHVQIQDLKLKNIYGTSKNKVAMNLQC 318
Query: 273 KDSMP--NIEIGNRNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 321
S P N+E+ + N+ +NG +EG +T++C NV ++ GK +P C+
Sbjct: 319 SKSFPCKNVELIDINIKHNG----LEGGSSTAVCENVDGSVRGKMVPQHCL 365
>gi|4455305|emb|CAB36840.1| putative polygalacturonase [Arabidopsis thaliana]
gi|7268080|emb|CAB78418.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 375
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/374 (30%), Positives = 173/374 (46%), Gaps = 78/374 (20%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
+ NV+ G+ +DG TD++ F + W A + VP G + + EF GPCK I
Sbjct: 1 MFNVQRHGSKSDGKTDNTNVFTSVWNRACRRKSGSSKIYVPKGTFYLGGVEFVGPCKNPI 60
Query: 86 SFQLQGLLDL--------------FSIDTSLSLA-KGTFHGQGETAWPLNQCHKNSDC-Q 129
F + G L F LS++ GT GQG+ +WPLN CHKN +C +
Sbjct: 61 EFLIDGTLLAPANPNNIKQDTWIKFKYINDLSISGSGTLDGQGKQSWPLNDCHKNPNCPK 120
Query: 130 LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----------- 178
L + F F+N+S I I S++S+ H N ++ + + ITA +S
Sbjct: 121 LAMTMGFAFVNNSNIKDITSLNSKMGHFNFFSVHHFNITGVTITAPGNSPNTDGIKMGSC 180
Query: 179 ----------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRN 216
+ ++ +S V CGPG GISVGSLGK +++V LT+R+
Sbjct: 181 SNIHISNTNIGTGDDCIAILSGTTNLDISNVNCGPGHGISVGSLGKNKDEKDVKDLTIRD 240
Query: 217 CTFTCTSNGVRVKTWPDSHIGI-ASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKD- 274
F TS+G+R+KTW S I SNF +E+I M +V PI IDQ YCP+ C + K
Sbjct: 241 VIFNGTSDGIRIKTWESSASKILVSNFLYENIQMIDVGKPINIDQKYCPHPPCEHEQKGE 300
Query: 275 ---SMPNIEIGN---------------------RNLVYNGVNVKVEG---PETTSLCSNV 307
+ N+++ N +N+ +N+ G +T +C NV
Sbjct: 301 SHVQIQNLKLKNIYGTSKNKVAVNLQCSKRFPCKNIELIDINITNNGLVDSFSTLVCENV 360
Query: 308 KPTLFGKQIPATCV 321
++ GK +P C+
Sbjct: 361 DGSVSGKMVPQHCI 374
>gi|226503988|ref|NP_001141594.1| exopolygalacturonase precursor [Zea mays]
gi|194705208|gb|ACF86688.1| unknown [Zea mays]
gi|414877547|tpg|DAA54678.1| TPA: exopolygalacturonase [Zea mays]
Length = 428
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 166/342 (48%), Gaps = 57/342 (16%)
Query: 18 RGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEF 77
G +R ++ FGA +DG TD ++A +W A G T+L+P G YLV F
Sbjct: 52 EGAARASRTFDISKFGATSDGKTDSTQAVQDTWTSACGAMG-DATMLIPKGDYLVGPLYF 110
Query: 78 EGPCKASISFQLQGLLDLFSIDTSLSLAK---------------GTFHGQGETAWPLNQC 122
GPC I+ QL G+L L S D + A GT GQG + +
Sbjct: 111 SGPCMGDITIQLDGIL-LGSNDLAKYTASWIQVSHVNNIVINGSGTLDGQGTAVY--TKS 167
Query: 123 HKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD----- 177
+ +P + ++ + T++GIK ++S++FHINI ++ + D+ ITA AD
Sbjct: 168 KTDVVKAMPNTLVLFYVTNGTVSGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTD 227
Query: 178 ----------------------------SSKDILVSEVFCGPGQGISVGSLGKGIKDEEV 209
S ++V+ + CGPGQGISVG LG+ +++V
Sbjct: 228 GVHVGGSSNVRITNSTIGTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDV 287
Query: 210 VGLTVRNCTFTCTSNGVRVKTWPDSH-IGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
+TVR+C T+NGVR+K++ D+ + AS+ TFE+I M V NPI+IDQ +CP C
Sbjct: 288 SDVTVRDCVLRNTTNGVRIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 347
Query: 269 NIKPKDSMPNIEIGNRNLVYNGVNVKVEGPETTS-LCSNVKP 309
K +S + +N+ + ++ PE S LCS +P
Sbjct: 348 PGKRSNSS---HVSIKNVTFRNISGTSSTPEAVSLLCSETQP 386
>gi|225217044|gb|ACN85328.1| exopolygalacturonase precursor [Oryza brachyantha]
Length = 402
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 101/310 (32%), Positives = 160/310 (51%), Gaps = 38/310 (12%)
Query: 32 FGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQG 91
GA +G TD SKA +W+ A G K T+++P G ++ +F GPCK +++ QL G
Sbjct: 58 LGANGNGRTDSSKAVMEAWKSACGGAG-KQTIVIPKGDFVTGPMDFTGPCKGAVTVQLDG 116
Query: 92 LL-----------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LPTP 133
L ++ +D + KGT GQG W N C KN +C+ LP
Sbjct: 117 NLLGSNDLSKYKGKLANWIEVRKVDNLVISGKGTLDGQGPGVWGKNSCAKNYNCKILPNT 176
Query: 134 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH------------ADSSKD 181
+ N +N++ ++GI D+++FH+N+ C ++ + ++ S
Sbjct: 177 LVLNTVNNALVSGITLKDAKFFHMNMFRCKDVTVQGGSPSSAPPVGTGDDCISVGPGSDG 236
Query: 182 ILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGI-AS 240
I ++ V CGPG GISVGSLG+ +++V +TVR+C T+NGVR+K++ D+ I AS
Sbjct: 237 INITGVTCGPGHGISVGSLGRYKDEKDVRDVTVRDCVLRNTTNGVRIKSYEDALSPITAS 296
Query: 241 NFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNIEIGNRNLVYNGVNVKVEGPET 300
T+E+I M V NPI+IDQ YCP C S + E+ +++ + + PE
Sbjct: 297 RLTYENIRMEGVANPIIIDQKYCPNKICT-----SSGSSEVTVKDVTFKNITGTSSTPEA 351
Query: 301 TSL-CSNVKP 309
+L CS+ P
Sbjct: 352 VTLVCSDKLP 361
>gi|15226527|ref|NP_179147.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|4544368|gb|AAD22279.1| putative polygalacturonase [Arabidopsis thaliana]
gi|330251308|gb|AEC06402.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 404
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 122/393 (31%), Positives = 182/393 (46%), Gaps = 83/393 (21%)
Query: 7 FSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP 66
F ++V+ ++VR +V NV+ GA DG TD++ AF + W A + VP
Sbjct: 16 FFIVVASRSTVRP-----KVFNVQRHGAKPDGKTDNANAFTSIWSRACKRISGSSKIYVP 70
Query: 67 PGKYLVSFAEFEGPCKASISFQLQGLL-------DL-------FSIDTSLSLA-KGTFHG 111
G + + EF GPCK I F + G L D+ F +LS++ GT G
Sbjct: 71 KGTFYLGGVEFVGPCKNPIEFIIDGTLLAPANPSDIKQDTWINFRYINNLSISGSGTLDG 130
Query: 112 QGETAWPLNQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
QG+ +WP N CH N +C +L + F F+N+S I I S++S+ H N ++ + +
Sbjct: 131 QGKQSWPHNDCHTNPNCPKLAMTMGFAFVNNSNIKDITSLNSKMGHFNFFSVHHFNITGV 190
Query: 171 KITAHADS---------------------------------SKDILVSEVFCGPGQGISV 197
ITA DS + ++ +S V CGPG GISV
Sbjct: 191 TITAPGDSPNTDGIKMGSCSNIQISDTNIGTGDDCIAILSGTTNLNISNVNCGPGHGISV 250
Query: 198 GSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGI-ASNFTFEDIVMNNVENPI 256
GSLGK +++V L VR+ F TS+G+R+K W S I SNF +E+I M +V PI
Sbjct: 251 GSLGKNKDEKDVKDLIVRDVIFNGTSDGIRIKNWESSASKILVSNFVYENIQMIDVGKPI 310
Query: 257 VIDQLYCPYNKCNIKPKD----SMPNIEIGN---------------------RNLVYNGV 291
IDQ YCP+ C + K + N+++ N +N+ +
Sbjct: 311 NIDQKYCPHPPCEHERKGESHVQIQNLKLKNIYGTSKNKVAVNLQCSKIFPCKNVELIDI 370
Query: 292 NVKVEGPE---TTSLCSNVKPTLFGKQIPATCV 321
N+K G + +TS+C NV GK P C+
Sbjct: 371 NIKQNGVKDGSSTSVCENVDGFARGKMFPPHCL 403
>gi|297744463|emb|CBI37725.3| unnamed protein product [Vitis vinifera]
Length = 388
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 120/354 (33%), Positives = 173/354 (48%), Gaps = 67/354 (18%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPC 81
A + NV+ FGA ADG TDD +AF +W+EA G K +L+P G Y++ F GPC
Sbjct: 48 ANTHLFNVRSFGAQADGHTDDRRAFTAAWKEACASTG-KVKLLIPKGTYMIGPITFAGPC 106
Query: 82 KA--SISFQLQGLLDL-----------FSIDTSLSL-AKGTFHGQGETAWPLNQCHKNSD 127
+ S++ L+ DL F L+L GTF GQG AWP N+C N++
Sbjct: 107 NSVSSLTGYLKATTDLSEYGFSAGWIEFGWMKGLTLTGGGTFDGQGVEAWPYNKCPINAN 166
Query: 128 CQL-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HA 176
C+L PT ++F +N + + GI SV+S++FHI ++ C N K + +KI+A H
Sbjct: 167 CKLLPTNLKFIAMNKTVVRGITSVNSKFFHIALVECNNFKGSQIKISAPENSPNTDGIHI 226
Query: 177 DSSKDILVSEVFCGPGQG-ISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTW---P 232
+ S + S G G ISVG + +V ++ + F + +KTW P
Sbjct: 227 ERSSGVYFSRSLIGTGDDCISVGQ-----GNSQVTITSITSVIFD-----IWIKTWANSP 276
Query: 233 DSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKP--KDSMPNIEIGN------- 283
DS A+N TFE+IVMNNV NPI+IDQ YCP+ C K + + +I N
Sbjct: 277 DSSE--ATNMTFENIVMNNVTNPIIIDQAYCPFMSCASKAPSRVKLSDIYFKNIRGTSLS 334
Query: 284 --------------RNLVYNGVNVKVEGPE--TTSLCSNVKPTLFGKQIPATCV 321
+N+ V++ + E TS C NV+ G QIP C
Sbjct: 335 AVAVTLKCSRGTPCQNIYLQDVHLDLSSGEKHATSSCRNVRVKYSGTQIPPPCA 388
>gi|357128256|ref|XP_003565790.1| PREDICTED: exopolygalacturonase-like [Brachypodium distachyon]
Length = 417
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 165/333 (49%), Gaps = 59/333 (17%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
++ GA +DG TD SK + +W+ A G + TV++P G++L F GPC+ ++
Sbjct: 50 FDITKLGAASDGKTDCSKELEEAWKSACGAAG-QHTVVIPKGEFLCGPVNFSGPCEGDVT 108
Query: 87 FQLQGLL---------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLP 131
Q+ G L ++ +D + GT GQG W + K P
Sbjct: 109 IQIDGTLLATNDLPKYGGGSWINILKVDNLVITGSGTLDGQGSNVWTKDPQAKAG---YP 165
Query: 132 TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------- 178
+ +++ + +++GI ++S++FH+NI ++K++++ ITA DS
Sbjct: 166 NTLVLDYVKNGSVSGITLLNSKFFHMNIYMSSDVKIDNVTITAPGDSPNTDGIHIGDSSN 225
Query: 179 --------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCT 218
S I V+ V CGPGQGISVG LG+ +++V +TV++C
Sbjct: 226 IHVTGATIGTGDDCISIGGGSASITVTGVTCGPGQGISVGCLGRYKDEKDVSDVTVKDCV 285
Query: 219 FTCTSNGVRVKTWPDSHIGI-ASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMP 277
++NGVR+KT+ D+ I ASN TFE+I M +V NPI+IDQ YCP C K K +
Sbjct: 286 LRSSTNGVRIKTYVDAVKSITASNLTFENIKMEDVANPIIIDQNYCPEKICTAKSKSA-- 343
Query: 278 NIEIGNRNLVYNGVNVKVEGPETTS-LCSNVKP 309
+ +++++ + PE S LCS +P
Sbjct: 344 ---VTVKDIIFRNITGTSSTPEAVSLLCSEKQP 373
>gi|413936196|gb|AFW70747.1| hypothetical protein ZEAMMB73_580033 [Zea mays]
Length = 435
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 108/333 (32%), Positives = 167/333 (50%), Gaps = 56/333 (16%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
L++ GA DG +D + +W+ A G++ +++PPG YL E +GPCK+SI
Sbjct: 68 LDIAQLGAKGDGKSDSTPMILKAWKNACEATGVQ-KIVIPPGNYLTGGLELKGPCKSSII 126
Query: 87 FQLQGLL----DLFSID---------TSLSL-AKGTFHGQGETAWPLNQCHKNSDCQ-LP 131
+L G L DL + +LS+ GT GQG W NQC + +C+ LP
Sbjct: 127 IRLDGNLLGTGDLSAYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILP 186
Query: 132 TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------- 178
+ +F+ + I GI ++S++FH+NI C N+ ++ + + A DS
Sbjct: 187 NSLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSN 246
Query: 179 --------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCT 218
SK I + V CGPG GISVGSLG+ +++V + V CT
Sbjct: 247 VTISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCT 306
Query: 219 FTCTSNGVRVKTWPDSHIGI-ASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMP 277
T+NG+R+K++ DS + AS F +E I M+NV PI+IDQ YCP N C +K S
Sbjct: 307 IAGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNIC-VKSGAS-- 363
Query: 278 NIEIGNRNLVYNGVNVKVEGPETTSL-CSNVKP 309
++ ++V+ ++ PE +L C+N P
Sbjct: 364 --KVAVNDVVFKNIHGTSNTPEAITLNCANNLP 394
>gi|15226529|ref|NP_179148.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|20197930|gb|AAM15318.1| putative polygalacturonase [Arabidopsis thaliana]
gi|330251309|gb|AEC06403.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 402
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 122/389 (31%), Positives = 181/389 (46%), Gaps = 83/389 (21%)
Query: 7 FSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP 66
F ++V+ ++VR +V NV+ GA DG TD++ AF + W A + VP
Sbjct: 16 FFIVVASRSTVRP-----KVFNVQRHGAKPDGKTDNANAFTSIWSRACKRISGSSKIYVP 70
Query: 67 PGKYLVSFAEFEGPCKASISFQLQGLL-------DL-------FSIDTSLSLA-KGTFHG 111
G + + EF GPCK I F + G L D+ F +LS++ GT G
Sbjct: 71 KGTFYLGGVEFVGPCKNPIEFIIDGTLLAPANPSDIKQDTWINFRYINNLSISGSGTLDG 130
Query: 112 QGETAWPLNQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
QG+ +WP N CH N +C +L + F F+N+S I I S++S+ H N ++ + +
Sbjct: 131 QGKQSWPHNDCHTNPNCPKLAMTMGFAFVNNSNIKDITSLNSKMGHFNFFSVHHFNITGV 190
Query: 171 KITAHADS---------------------------------SKDILVSEVFCGPGQGISV 197
ITA DS + ++ +S V CGPG GISV
Sbjct: 191 TITAPGDSPNTDGIKMGSCSNIQISDTNIGTGDDCIAILSGTTNLNISNVNCGPGHGISV 250
Query: 198 GSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGI-ASNFTFEDIVMNNVENPI 256
GSLGK +++V L VR+ F TS+G+R+KTW S I SNF +E+I M +V PI
Sbjct: 251 GSLGKSKDEKDVKDLIVRDVIFNGTSDGIRIKTWESSASKILVSNFVYENIQMIDVGKPI 310
Query: 257 VIDQLYCPYNKCNIKPKD----SMPNIEIGN---------------------RNLVYNGV 291
IDQ YCP+ C + K + N+++ N +N+ +
Sbjct: 311 NIDQKYCPHPPCEHERKGESHVQIQNLKLKNIYGTSKNKVAVNLQCSKIFPCKNVELIDI 370
Query: 292 NVKVEGPE---TTSLCSNVKPTLFGKQIP 317
N+K G + +TS+C NV GK P
Sbjct: 371 NIKQNGVKDGSSTSVCENVDGFARGKMFP 399
>gi|413936200|gb|AFW70751.1| hypothetical protein ZEAMMB73_321863 [Zea mays]
Length = 413
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 108/333 (32%), Positives = 167/333 (50%), Gaps = 56/333 (16%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
L++ GA DG +D + +W+ A G++ +++PPG YL E +GPCK+SI
Sbjct: 46 LDIAQLGAKGDGKSDSTPMILKAWKNACEATGVQ-KIVIPPGNYLTGGLELKGPCKSSII 104
Query: 87 FQLQGLL----DLFSID---------TSLSL-AKGTFHGQGETAWPLNQCHKNSDCQ-LP 131
+L G L DL + +LS+ GT GQG W NQC + +C+ LP
Sbjct: 105 IRLDGNLLGTGDLSAYQRNWIEIENVENLSINGHGTIDGQGALVWSKNQCQHSYNCKILP 164
Query: 132 TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------- 178
+ +F+ + I GI ++S++FH+NI C N+ ++ + + A DS
Sbjct: 165 NSLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSN 224
Query: 179 --------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCT 218
SK I + V CGPG GISVGSLG+ +++V + V CT
Sbjct: 225 VTISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCT 284
Query: 219 FTCTSNGVRVKTWPDSHIGI-ASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMP 277
T+NG+R+K++ DS + AS F +E I M+NV PI+IDQ YCP N C +K S
Sbjct: 285 IAGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNIC-VKSGAS-- 341
Query: 278 NIEIGNRNLVYNGVNVKVEGPETTSL-CSNVKP 309
++ ++V+ ++ PE +L C+N P
Sbjct: 342 --KVAVNDVVFKNIHGTSNTPEAITLNCANNLP 372
>gi|242093570|ref|XP_002437275.1| hypothetical protein SORBIDRAFT_10g024010 [Sorghum bicolor]
gi|241915498|gb|EER88642.1| hypothetical protein SORBIDRAFT_10g024010 [Sorghum bicolor]
Length = 410
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 158/333 (47%), Gaps = 56/333 (16%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
++ GA DG D +KA +W A G K T+L+P G YLV F GPCK ++
Sbjct: 43 FDISKLGASGDGKKDSTKAVQEAWTSACGGTG-KQTILIPKGDYLVGPLNFTGPCKGDVT 101
Query: 87 FQLQGLL--------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LP 131
Q+ G L ++ +D + KG GQG W N C K DC+ LP
Sbjct: 102 IQVDGNLLATTDLSQYKGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILP 161
Query: 132 TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------- 178
+ +++N+ ++GI +++++FH+N+ C ++ + D+ +TA DS
Sbjct: 162 NSLVLDYVNNGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSG 221
Query: 179 --------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCT 218
+ + ++ V CGPG GIS+GSLG+ +++V + V++CT
Sbjct: 222 VTIENTVIGVGDDCISIGPGTTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCT 281
Query: 219 FTCTSNGVRVKTWPD-SHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMP 277
TSNG+R+K + D + + AS +E+I M + NPI+ID YCP C
Sbjct: 282 LKKTSNGLRIKAYEDAASVLTASKIHYENIKMEDSSNPIIIDMKYCPNKICTASGAS--- 338
Query: 278 NIEIGNRNLVYNGVNVKVEGPETTS-LCSNVKP 309
++ +++ + V PE S LCS+ P
Sbjct: 339 --KVTVKDVSFKNVTGTSASPEAVSLLCSDKIP 369
>gi|125526181|gb|EAY74295.1| hypothetical protein OsI_02183 [Oryza sativa Indica Group]
Length = 407
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 165/339 (48%), Gaps = 63/339 (18%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPC 81
A N V ++ + GAVADG TD +KA +W A G + V++P G+++ F GPC
Sbjct: 40 AVNTVFDITELGAVADGKTDSTKAVQDAWDAACGLAGSQ-KVVIPKGEFMTGPLNFSGPC 98
Query: 82 KASISFQLQGLL---------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNS 126
K ++ Q+ G + ++ ID L GT GQG W
Sbjct: 99 KGYVTVQIDGTMFGSNDIPKYNKGNWIEILHIDNVLINGSGTLDGQGAAVW-------KD 151
Query: 127 DCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------- 178
+C+ LP + +++ + T++G+K V++++FHIN+ + + ++ ITA A+S
Sbjct: 152 ECKILPNTLVLDYVKNGTVSGLKLVNAKFFHINVYMSKGVTIKNVTITAVANSPNTDGVH 211
Query: 179 ---SKDILVSE-----------------------VFCGPGQGISVGSLGKGIKDEEVVGL 212
S +I VS+ + CGPGQGISVG LG+ +++V +
Sbjct: 212 IGDSSEISVSDSTIATGDDCISVGPGSSRISIQGITCGPGQGISVGCLGRFKDEKDVTDV 271
Query: 213 TVRNCTFTCTSNGVRVKTWPDSHIGI-ASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK 271
TVR+C TSNGVR+K++ D I S TFE+I M+ V NP+++DQ YCP C K
Sbjct: 272 TVRDCVLRNTSNGVRIKSYEDVLSPITVSRLTFENIRMDGVANPVIVDQKYCPEKDCPEK 331
Query: 272 PKDSMPNIEIGNRNLVYNGVNVKVEGPETTS-LCSNVKP 309
I +N+ + + PE S LCS+ P
Sbjct: 332 KGSKTVTI----KNVTFRNITGTSNTPEAVSLLCSDQLP 366
>gi|4826572|emb|CAB42886.1| polygalacturonase [Phleum pratense]
Length = 394
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 167/345 (48%), Gaps = 59/345 (17%)
Query: 16 SVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFA 75
+ G D T ++ GA DG TD +K + +W A G K T+++P G +L
Sbjct: 16 AASGADGT---YDITKLGAKPDGKTDCTKEVEEAWASACGGTG-KNTIVIPKGDFLTGPL 71
Query: 76 EFEGPCKA-SISFQLQGLL--------------DLFSIDTSLSLAKGTFHGQGETAWPLN 120
F GPCK S++ +L G L ++ I KGT GQG+ W N
Sbjct: 72 NFTGPCKGDSVTIKLDGNLLSSNDLAKYKANWIEIMRIKKLTITGKGTLDGQGKAVWGKN 131
Query: 121 QCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS- 178
C KN +C+ LP + +F +D+ I GI +++++FH+NI C + + D+ ITA DS
Sbjct: 132 SCAKNYNCKILPNTLVLDFCDDALIEGITLLNAKFFHMNIYECKGVTVKDVTITAPGDSP 191
Query: 179 --------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKD 206
S + ++ V CGPG GISVGSLG+ +
Sbjct: 192 NTDGIHIGDSSKVTITDTTIGTGDDCISIGPGSTGLNITGVTCGPGHGISVGSLGRYKDE 251
Query: 207 EEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGI-ASNFTFEDIVMNNVENPIVIDQLYCPY 265
++V +TV+NC ++NG+R+K++ D+ + AS T+E++ M +V PI+IDQ YCP
Sbjct: 252 KDVTDITVKNCVLKKSTNGLRIKSYEDAKSPLTASKLTYENVKMEDVGYPIIIDQKYCPN 311
Query: 266 NKCNIKPKDSMPNIEIGNRNLVYNGVNVKVEGPETTS-LCSNVKP 309
C K + + +++ + + PE S LCS+ +P
Sbjct: 312 KICTSKGDSARVTV----KDVTFRNITGTSSTPEAVSLLCSDKQP 352
>gi|51507375|emb|CAH18935.1| polygalacturonase [Pyrus communis]
Length = 398
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 156/313 (49%), Gaps = 52/313 (16%)
Query: 4 AARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTV 63
AA F+LL+ I S+ +DA +V GA ADG TD +KAF ++W A +
Sbjct: 12 AAVFALLMMAI-SITNVDAAAVTFSVSSLGAKADGSTDSTKAFLSAWSNACASVN-PAVI 69
Query: 64 LVPPGKYLVSFAEFEGPCKA-SISFQLQGLLD---------------LFSIDTSLSLAKG 107
VP G++L+ A F GPCK +I+F++ G L LF ++++ G
Sbjct: 70 YVPAGRFLLGNAVFSGPCKNNAITFRIAGTLVAPSDYRVIGNAGNWLLFQHVNGVTISGG 129
Query: 108 TFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 167
GQG W K+ T + F+ N+ ++G+ S++S+ FHI + GC N+K+
Sbjct: 130 VLDGQGTGLWDCKSSGKSCPSG-ATTLSFSNSNNVVVSGLISLNSQMFHIVVNGCQNVKM 188
Query: 168 NDLKITAHADS---------------------------------SKDILVSEVFCGPGQG 194
+K+ A +S + ++ + V CGPG G
Sbjct: 189 QGVKVNAAGNSPNTDGIHVQMSSGVTILDSKISTGDDCVSVGPGTTNLWIENVACGPGHG 248
Query: 195 ISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVEN 254
IS+GSLGK ++ V +TV+ TFT T NGVR+K+W G A + F+ IVM NV+N
Sbjct: 249 ISIGSLGKDQQEAGVQNVTVKTVTFTGTENGVRIKSWGRPSTGFARSILFQHIVMTNVQN 308
Query: 255 PIVIDQLYCPYNK 267
PIVIDQ YCP +K
Sbjct: 309 PIVIDQNYCPNDK 321
>gi|4335713|gb|AAD17391.1| putative polygalacturonase [Arabidopsis thaliana]
gi|20197929|gb|AAM15317.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 402
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/391 (30%), Positives = 181/391 (46%), Gaps = 81/391 (20%)
Query: 7 FSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP 66
F ++V+ ++VR +V NV+ GA DG TD++ AF + W A + VP
Sbjct: 16 FFIVVASRSTVRP-----KVFNVQRHGAKPDGKTDNANAFTSIWSRACKRISGSSKIYVP 70
Query: 67 PGKYLVSFAEFEGPCKASISFQLQGLL-------DL-------FSIDTSLSLA-KGTFHG 111
G + + EF G CK I F + G L D+ F +LS++ GT G
Sbjct: 71 KGTFYLGGVEFVGLCKNPIEFIIDGTLLAPANPSDIKQDTWINFRYINNLSISGSGTLDG 130
Query: 112 QGETAWPLNQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
QG+ +WP N CH N +C +L + F F+N+S I I S++S+ H N ++ + +
Sbjct: 131 QGKQSWPHNDCHTNPNCPKLAMTMGFAFVNNSNIKDITSLNSKMGHFNFFSVHHFNITGV 190
Query: 171 KITAHADS---------------------------------SKDILVSEVFCGPGQGISV 197
ITA DS + ++ +S V CGPG GISV
Sbjct: 191 TITAPGDSPNTDGIKMGSCSNIQISDTNIGTGDDCIAILSGTTNLNISNVNCGPGHGISV 250
Query: 198 GSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGI-ASNFTFEDIVMNNVENPI 256
GSLGK +++ L VR+ F TS+G+R+KTW S I SNF +E+I M +V PI
Sbjct: 251 GSLGKNKDEKDAKDLIVRDVIFNGTSDGIRIKTWESSASKILVSNFVYENIQMIDVGKPI 310
Query: 257 VIDQLYCPYNKCNIKPKD--SMPNIEIGN---------------------RNLVYNGVNV 293
IDQ YCP+ C + K + N+++ N +N+ +N+
Sbjct: 311 NIDQKYCPHPPCEHERKSHVQIQNLKLKNIYGTSKNKVAMNLQCSKIFPCKNVELIDINI 370
Query: 294 KVEGPE---TTSLCSNVKPTLFGKQIPATCV 321
K G + +TS+C NV GK P C+
Sbjct: 371 KQNGVKDGSSTSVCENVDGFARGKMFPQHCL 401
>gi|363543457|ref|NP_001241738.1| exopolygalacturonase precursor [Zea mays]
gi|195624844|gb|ACG34252.1| exopolygalacturonase precursor [Zea mays]
Length = 428
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/342 (31%), Positives = 165/342 (48%), Gaps = 57/342 (16%)
Query: 18 RGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEF 77
G +R ++ FGA +DG TD ++ +W A G T+L+P G YLV F
Sbjct: 52 EGAARASRTFDISKFGATSDGKTDSTQVVQDTWTSACGAMG-DATMLIPKGDYLVGPLYF 110
Query: 78 EGPCKASISFQLQGLLDLFSIDTSLSLAK---------------GTFHGQGETAWPLNQC 122
GPC I+ QL G+L L S D + A GT GQG + +
Sbjct: 111 RGPCMGDITIQLDGIL-LGSNDLAKYTASWIQVSHVNNIVINGSGTLDGQGTAVY--TKS 167
Query: 123 HKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD----- 177
+ +P + ++ + TI+GIK ++S++FHINI ++ + D+ ITA AD
Sbjct: 168 KTDVVKAMPNTLVLFYVTNGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTD 227
Query: 178 ----------------------------SSKDILVSEVFCGPGQGISVGSLGKGIKDEEV 209
S ++V+ + CGPGQGISVG LG+ +++V
Sbjct: 228 GVHVGGSSNVRITNSTIGTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDV 287
Query: 210 VGLTVRNCTFTCTSNGVRVKTWPDSH-IGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
+TVR+C T+NGVR+K++ D+ + AS+ TFE+I M V NPI+IDQ +CP C
Sbjct: 288 SDVTVRDCVLRNTTNGVRIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVC 347
Query: 269 NIKPKDSMPNIEIGNRNLVYNGVNVKVEGPETTS-LCSNVKP 309
K +S + +++ + ++ PE S LCS +P
Sbjct: 348 PGKRSNSS---HVSIKDVTFRNISGTSSTPEAVSLLCSETQP 386
>gi|354549145|gb|AER27668.1| polygalacturonase [Pyrus pyrifolia]
gi|354549147|gb|AER27669.1| polygalacturonase [Pyrus pyrifolia]
Length = 398
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/313 (33%), Positives = 156/313 (49%), Gaps = 52/313 (16%)
Query: 4 AARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTV 63
AA F+LL+ I S+ +DA +V GA ADG TD +KAF ++W A +
Sbjct: 12 AAVFALLMMAI-SITNVDAAAVTFSVSSLGAKADGSTDSTKAFLSAWSNACASVN-PAVI 69
Query: 64 LVPPGKYLVSFAEFEGPCKA-SISFQLQGLLD---------------LFSIDTSLSLAKG 107
VP G++L+ A F GPCK +I+F++ G L LF ++++ G
Sbjct: 70 YVPAGRFLLGNAVFSGPCKNNAITFRIAGTLVAPSDYQVIGNAGNWLLFQHVNGVTISGG 129
Query: 108 TFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 167
GQG W K+ T + F+ N+ ++G+ S++S+ FHI + GC N+K+
Sbjct: 130 VLDGQGTGLWDCKSSGKSCPSG-ATTLSFSNSNNVVVSGLISLNSQMFHIVVNGCQNVKM 188
Query: 168 NDLKITAHADS---------------------------------SKDILVSEVFCGPGQG 194
+K+ A +S + ++ + V CGPG G
Sbjct: 189 QGVKVNAAGNSPNTDGIHVQMSSGVTILDSKISTGDDCVSVGPGTTNLWIENVACGPGHG 248
Query: 195 ISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVEN 254
IS+GSLGK ++ V +TV+ TFT T NGVR+K+W G A + F+ I+M NV+N
Sbjct: 249 ISIGSLGKDQQEAGVQNVTVKTVTFTGTENGVRIKSWGRPSTGFARSILFQHIIMTNVQN 308
Query: 255 PIVIDQLYCPYNK 267
PIVIDQ YCP +K
Sbjct: 309 PIVIDQNYCPNDK 321
>gi|22325697|ref|NP_179149.2| polygalacturonase-like protein [Arabidopsis thaliana]
gi|330251310|gb|AEC06404.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 404
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 121/393 (30%), Positives = 181/393 (46%), Gaps = 83/393 (21%)
Query: 7 FSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP 66
F ++V+ ++VR +V NV+ GA DG TD++ AF + W A + VP
Sbjct: 16 FFIVVASRSTVRP-----KVFNVQRHGAKPDGKTDNANAFTSIWSRACKRISGSSKIYVP 70
Query: 67 PGKYLVSFAEFEGPCKASISFQLQGLL-------DL-------FSIDTSLSLA-KGTFHG 111
G + + EF G CK I F + G L D+ F +LS++ GT G
Sbjct: 71 KGTFYLGGVEFVGLCKNPIEFIIDGTLLAPANPSDIKQDTWINFRYINNLSISGSGTLDG 130
Query: 112 QGETAWPLNQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
QG+ +WP N CH N +C +L + F F+N+S I I S++S+ H N ++ + +
Sbjct: 131 QGKQSWPHNDCHTNPNCPKLAMTMGFAFVNNSNIKDITSLNSKMGHFNFFSVHHFNITGV 190
Query: 171 KITAHADS---------------------------------SKDILVSEVFCGPGQGISV 197
ITA DS + ++ +S V CGPG GISV
Sbjct: 191 TITAPGDSPNTDGIKMGSCSNIQISDTNIGTGDDCIAILSGTTNLNISNVNCGPGHGISV 250
Query: 198 GSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGI-ASNFTFEDIVMNNVENPI 256
GSLGK +++ L VR+ F TS+G+R+KTW S I SNF +E+I M +V PI
Sbjct: 251 GSLGKNKDEKDAKDLIVRDVIFNGTSDGIRIKTWESSASKILVSNFVYENIQMIDVGKPI 310
Query: 257 VIDQLYCPYNKCNIKPKD----SMPNIEIGN---------------------RNLVYNGV 291
IDQ YCP+ C + K + N+++ N +N+ +
Sbjct: 311 NIDQKYCPHPPCEHERKGESHVQIQNLKLKNIYGTSKNKVAMNLQCSKIFPCKNVELIDI 370
Query: 292 NVKVEGPE---TTSLCSNVKPTLFGKQIPATCV 321
N+K G + +TS+C NV GK P C+
Sbjct: 371 NIKQNGVKDGSSTSVCENVDGFARGKMFPQHCL 403
>gi|296083327|emb|CBI22963.3| unnamed protein product [Vitis vinifera]
Length = 405
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/298 (35%), Positives = 145/298 (48%), Gaps = 56/298 (18%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCK--A 83
+ +V +GAV DG T++ AF +W +A N G K T+LVP G + + F GPC+
Sbjct: 31 IFDVTMYGAVGDGKTENGMAFLAAWDDACNHPG-KSTLLVPNGTFFIGPISFIGPCQNNQ 89
Query: 84 SISFQLQGLLD--------------LFSIDTSLSLAKGT------FHGQGETAWPLNQCH 123
S +++G L +F SL L T F QGE +W C
Sbjct: 90 SPKVEIRGTLKAPSSLKAFPTPSWIMFRQLQSLILTGETTTNTSLFDAQGEESWRHADCR 149
Query: 124 KNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA--------- 174
CQ PT I + + I+ I + + FH+ I+ N+ ++ + ITA
Sbjct: 150 HKLKCQFPTSIILVNVTNGNISNITLKNGKGFHMGIINSDNVTVHGVNITAPWNSPNTDG 209
Query: 175 ---------HADSSK---------------DILVSEVFCGPGQGISVGSLGKGIKDEEVV 210
H SS +I V CGPG GISVGSLGK +++VV
Sbjct: 210 VHIGYSTNIHITSSTIGVGDDCVSIGPGSINITVFNTKCGPGHGISVGSLGKYSAEKDVV 269
Query: 211 GLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
G+ V+NCT T NGVR+KTWP S AS+F FEDIVM NV NPI+IDQ YCP++ C
Sbjct: 270 GVRVKNCTINGTQNGVRIKTWPGSPASKASSFWFEDIVMINVSNPIIIDQEYCPWSTC 327
>gi|119507453|dbj|BAF42034.1| polygalacturonase3 [Pyrus communis]
Length = 398
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/313 (33%), Positives = 156/313 (49%), Gaps = 52/313 (16%)
Query: 4 AARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTV 63
AA F+LL+ I S+ +DA +V GA ADG TD +KAF ++W A +
Sbjct: 12 AAVFALLMMAI-SITNVDAAAVTFSVSSLGAKADGSTDSTKAFLSAWSNACASVN-PAVI 69
Query: 64 LVPPGKYLVSFAEFEGPCKA-SISFQLQGLLD---------------LFSIDTSLSLAKG 107
VP G++L+ A F GPCK +I+F++ G + LF ++++ G
Sbjct: 70 YVPAGRFLLGNAVFSGPCKNNAITFRIAGTIVAPSDYRVIGNAGNWLLFQHVNGVTISGG 129
Query: 108 TFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 167
GQG W K+ T + F+ N+ ++G+ S++S+ FHI + GC N+K+
Sbjct: 130 VLDGQGTGLWDCKSSGKSCPSG-ATTLSFSNSNNIVVSGLISLNSQMFHIVVNGCQNVKM 188
Query: 168 NDLKITAHADS---------------------------------SKDILVSEVFCGPGQG 194
+K+ A +S + ++ + V CGPG G
Sbjct: 189 QGVKVNAAGNSPNTDGIHVQMSSGVTILDSKISTGDDCVSVGPGTTNLWIENVACGPGHG 248
Query: 195 ISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVEN 254
IS+GSLGK ++ V +TV+ TFT T NGVR+K+W G A + F+ IVM NV+N
Sbjct: 249 ISIGSLGKDQQEAGVQNVTVKTVTFTGTENGVRIKSWGRPSTGFARSILFQHIVMTNVQN 308
Query: 255 PIVIDQLYCPYNK 267
PIVIDQ YCP +K
Sbjct: 309 PIVIDQNYCPNDK 321
>gi|224103843|ref|XP_002334010.1| predicted protein [Populus trichocarpa]
gi|222839530|gb|EEE77867.1| predicted protein [Populus trichocarpa]
Length = 408
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 121/392 (30%), Positives = 171/392 (43%), Gaps = 81/392 (20%)
Query: 3 LAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGT 62
L R +S + D +V NV +GA G D + +F +WR A N+ G
Sbjct: 23 LGRRAPAAISPRRTAPRRDPNEKVFNVLQYGAKPGGKQDSALSFIRAWRAACNYRGT-AR 81
Query: 63 VLVPPGKYLVSFAEFEGPC--KASISFQLQGLLD--------------LF-SIDTSLSLA 105
+L+P G +L+ F+GPC I Q+ G L LF +I+ L
Sbjct: 82 LLIPMGTFLIGATIFQGPCLGPVPIKVQIAGTLKAVPDPSMYEEDFWILFENINGLLVTG 141
Query: 106 KGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNL 165
GT GQG W N + + P+ I+FN + + I I SV+ FHI+I+ N+
Sbjct: 142 TGTVDGQGNAVWKYN----DGGSRFPSSIKFNHVANGIIRQITSVNPMGFHISIVLSQNI 197
Query: 166 KLNDLKITAHADS---------------------------------SKDILVSEVFCGPG 192
+ L ITA A S S D+ V +V CGPG
Sbjct: 198 RAKHLHITAPATSPNTDGIHISQSSVVKVSRSVISTGDDCVAIIQGSTDVSVKKVTCGPG 257
Query: 193 QGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNV 252
G SVGSLGK +++V G+ V NCT NGVR+KTW S ASN F+DI+M+NV
Sbjct: 258 HGFSVGSLGKYPDEKDVRGVVVTNCTLRNADNGVRIKTWGGSPPSQASNILFQDIIMDNV 317
Query: 253 ENPIVIDQLYCPYNKCNIKPKDSMPNIEIGN---------------------RNLVYNGV 291
+ PI+IDQ Y +K N + + ++ N L ++ +
Sbjct: 318 KRPIIIDQTYG--SKSNSPSRVKISDVRYINIRGTSASEVGVDLKCSEAVPCEKLYFSNI 375
Query: 292 NVKVEGPET---TSLCSNVKPTLFGKQIPATC 320
N+K GP+ TS C+N K G Q P C
Sbjct: 376 NLKYYGPKKLPFTSTCTNAKVNYVGNQFPPPC 407
>gi|115468430|ref|NP_001057814.1| Os06g0545200 [Oryza sativa Japonica Group]
gi|113595854|dbj|BAF19728.1| Os06g0545200 [Oryza sativa Japonica Group]
Length = 329
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 141/286 (49%), Gaps = 50/286 (17%)
Query: 32 FGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQG 91
G DG TD +KA D +W+ A G K T++ P G ++ F GPCK I QL G
Sbjct: 3 LGGKGDGKTDSTKAVDEAWKAACAGTG-KQTIVFPKGDFVTGPFNFTGPCKGDIVIQLDG 61
Query: 92 LL--------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LPTPIRF 136
L ++ +D KG GQG W N C K C+ LP +
Sbjct: 62 NLLGSTDLALFKVNWMEIKRVDNLEFSGKGKIDGQGAAVWSKNTCAKKYICKILPNSLVL 121
Query: 137 NFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------------ 178
+F+N+ ++GI V+ ++FH+N+ C N+ + DL ITA DS
Sbjct: 122 DFVNNGLVSGISLVNPKFFHMNMFKCKNITIKDLTITAPEDSPNTDDIHICDSSKISIID 181
Query: 179 ---------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTS 223
++ I +S V CGPG GISVGSLG+ +++V +TV+NC ++
Sbjct: 182 TVIGTGDDCISIGPGTEGINISGVTCGPGYGISVGSLGRYKDEKDVTDVTVKNCVLKKST 241
Query: 224 NGVRVKTWPD-SHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
NGVR+K++ D + + S FT+++I M +V NPI+ID YCP C
Sbjct: 242 NGVRIKSYEDAASVLTTSKFTYKNIKMEDVANPIIIDMKYCPNKIC 287
>gi|449449695|ref|XP_004142600.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 399
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 149/298 (50%), Gaps = 53/298 (17%)
Query: 20 IDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEG 79
+DA++ NV DFG DG TD ++AF T+W A K T+ VP G+Y + F G
Sbjct: 28 VDASS--YNVVDFGGKGDGTTDSTQAFQTAWTNAC-ASTKKATIYVPRGRYCLQNVTFSG 84
Query: 80 PCK-ASISFQLQGLLD---------------LFSIDTSLSLAKGTFHGQGETAWPLNQCH 123
PCK +I F++ G ++ +F +++ G+ G+G W
Sbjct: 85 PCKNKAIIFRIDGSMEAPSDYLVIGNSAAWVVFRHVDGMTILGGSLDGKGAALWACKNSS 144
Query: 124 KNSDCQL-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA-------- 174
N+ C T + F+ + + +KS++S+ FH+ I GC N+ + L+++A
Sbjct: 145 YNALCPTGATTLEFSNSKNVVVNNLKSLNSQMFHVAINGCENVMVKGLRVSASSNSPNTD 204
Query: 175 --HADSSKDILV-----------------------SEVFCGPGQGISVGSLGKGIKDEEV 209
H SS ++ + + CGPG GIS+GSLGK +K+ V
Sbjct: 205 GIHVQSSSNVTIINSKIGTGDDCISVGPGVSNLQIQNISCGPGHGISIGSLGKDVKEIGV 264
Query: 210 VGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
+T++N F+ T NGVR+KTW G A++ F+ IVMNNV NPIVIDQ YCP +K
Sbjct: 265 QNVTIKNVVFSRTENGVRIKTWGKPSNGFATDIVFQHIVMNNVHNPIVIDQNYCPTHK 322
>gi|24475519|dbj|BAC22689.1| polygalacturonase [Pyrus communis]
Length = 398
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 103/313 (32%), Positives = 156/313 (49%), Gaps = 52/313 (16%)
Query: 4 AARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTV 63
AA F+LL+ I S+ +DA +V GA ADG D +KAF ++W A +
Sbjct: 12 AAVFALLMMAI-SITNVDAAAVTFSVSSLGAKADGSIDSTKAFLSAWSNACASVN-PAVI 69
Query: 64 LVPPGKYLVSFAEFEGPCKA-SISFQLQGLLD---------------LFSIDTSLSLAKG 107
VP G++L+ A F GPCK+ +I+F++ G + LF ++++ G
Sbjct: 70 YVPAGRFLLGNAVFSGPCKSNAITFRIAGTIVAPSDYRVIGNAGNWLLFQHVNGVTISGG 129
Query: 108 TFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 167
GQG W K+ T + F+ N+ ++G+ S++S+ FHI + GC N+K+
Sbjct: 130 VLDGQGTGLWDCKSSGKSCPSG-ATTLSFSNSNNIVVSGLISLNSQMFHIVVNGCQNVKM 188
Query: 168 NDLKITAHADS---------------------------------SKDILVSEVFCGPGQG 194
+K+ A +S + ++ + V CGPG G
Sbjct: 189 QGVKVNAAGNSPNTDGIHVQMSSGVTILDSKISTGDDCVSVGPGTTNLWIENVACGPGHG 248
Query: 195 ISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVEN 254
IS+GSLGK ++ V +TV+ TFT T NGVR+K+W G A + F+ IVM NV+N
Sbjct: 249 ISIGSLGKDQQEAGVQNVTVKTVTFTGTENGVRIKSWGRPSTGFARSILFQHIVMTNVQN 308
Query: 255 PIVIDQLYCPYNK 267
PIVIDQ YCP +K
Sbjct: 309 PIVIDQNYCPNDK 321
>gi|449471477|ref|XP_004153320.1| PREDICTED: polygalacturonase-like, partial [Cucumis sativus]
Length = 295
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 99/273 (36%), Positives = 141/273 (51%), Gaps = 52/273 (19%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPC 81
A V +V FGA +G D + +W++A VL+P G Y +S + +GPC
Sbjct: 27 AGGGVFDVTSFGAKPNG--DITGPLLVAWKDAC-ASTTPSKVLIPKGSYGLSQSNLKGPC 83
Query: 82 KASISFQLQG------------LLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDC- 128
K+ I Q++G LL L ID G GQG+ W N CH C
Sbjct: 84 KSPIELQIEGTLQASPDPKGDGLLLLEYIDQLTVSGTGVLDGQGKAGWEKNDCHLKKICT 143
Query: 129 QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH------------- 175
+LP ++ NF+ +S + I S+DS+ +HIN+LGC NL ++ + ITA
Sbjct: 144 KLPMTLKLNFITNSIVKDITSLDSKNYHINLLGCKNLTIDHVTITAPGNSPNTDGIHVSS 203
Query: 176 --------------------ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVR 215
D++K I++S+V CGPG GIS+GSLGK K++EVVG+TV+
Sbjct: 204 SEQINILNTNIATGDDCISVGDTNKQIVISDVTCGPGHGISIGSLGKYTKEKEVVGVTVK 263
Query: 216 NCTFTCTSNGVRVKTWPDSHIGI--ASNFTFED 246
C T T+NGVR+KTWPDS +G A++ FED
Sbjct: 264 KCKLTSTTNGVRIKTWPDS-VGTFPATDMHFED 295
>gi|449452150|ref|XP_004143823.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
gi|449525056|ref|XP_004169536.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 392
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 148/288 (51%), Gaps = 50/288 (17%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASISF 87
NV FGA D TD + +F +W A T+ VP G++L+ F+GPCK I+F
Sbjct: 29 NVISFGAKGDERTDSTVSFLKAWASACT-SPKPSTIYVPKGRFLIKGIVFKGPCKNQITF 87
Query: 88 QLQGLL---------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPT 132
Q+ G + LFS +S+ GT G+G + W KN +P+
Sbjct: 88 QIDGTVVAPSDYRALGNSDSWILFSKVNKVSVVGGTLDGKGASYWACKTSGKNCPVGVPS 147
Query: 133 PIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADSSK-- 180
+ FN+ N+ I+G+ S++SR H+ I GC N+ + ++K A H +SK
Sbjct: 148 -MTFNWANNIVISGLTSINSRQTHLVINGCNNVVVRNVKAIAPDQSPNTDGIHVQTSKGV 206
Query: 181 ---------------------DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTF 219
++ ++ + CGPG G+S+GSLGK +K++ V ++++N F
Sbjct: 207 TIIGCTLQTGDDCVSIGPGTYNLFMTNLKCGPGHGVSIGSLGKELKEDGVQNISLKNSVF 266
Query: 220 TCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
+ + NG+R+K+W G N F++IVM+NVENPIVIDQ YCP NK
Sbjct: 267 SGSDNGIRIKSWARPSKGFVRNIVFDNIVMDNVENPIVIDQNYCPDNK 314
>gi|449433419|ref|XP_004134495.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
gi|449503881|ref|XP_004162215.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
Length = 425
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 117/340 (34%), Positives = 166/340 (48%), Gaps = 60/340 (17%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKAS 84
RV +V D+G VADG T++S A +W +A G +L+P G Y V F GPC
Sbjct: 46 RVFDVNDYGGVADGKTNNSLALMAAWEDACYHQG-GSMLLIPEGNYFVDQVTFSGPCFND 104
Query: 85 ISFQLQGLLDL-------------FSIDTSLSLAKG---TFHGQGETAWPL-NQCHKNSD 127
+S ++ L L F LSL G T G+G W ++C
Sbjct: 105 LSPKVLILGTLIAPTNLTADVWIHFDSLRRLSLTAGHLSTLDGRGAQTWSSGSRCRHAMT 164
Query: 128 CQL-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HA 176
C + ++ + + + T++ I VDS+ FH++I C N+ L+ ITA H
Sbjct: 165 CAMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHI 224
Query: 177 DSSKDI-----------------------LVSEVFCGPGQGISVGSLGKGIKDEEVVGLT 213
S +I LVS V CGPG GIS+GSLG+ + +V G+
Sbjct: 225 SQSTNISITNSKIGVGDDCVSIGPGSVNVLVSNVTCGPGHGISIGSLGRYKMENDVRGIW 284
Query: 214 VRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPK 273
V NCT + T NGVRVKTWP H A+N TF++IVM NV NPI+IDQ YCP + C+ +
Sbjct: 285 VENCTISGTQNGVRVKTWPGDHASNATNLTFQNIVMINVSNPIIIDQQYCPNSSCDSRES 344
Query: 274 DSMPNIEIGNRNL--VYN---GVNVKVEGPETTSLCSNVK 308
S+ +I RN+ YN +N+K +T C N++
Sbjct: 345 SSVKLSDINIRNISGTYNSEFAINMKC---SSTKACENIR 381
>gi|222640352|gb|EEE68484.1| hypothetical protein OsJ_26895 [Oryza sativa Japonica Group]
Length = 389
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/355 (30%), Positives = 177/355 (49%), Gaps = 66/355 (18%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
NV+++GA +G TDDSKA T+W+ A G T+++PPG Y + G KA+
Sbjct: 39 FNVRNYGAKGNGQTDDSKALMTAWKAACAATGAV-TLVLPPGTYYIG----PGTLKAATD 93
Query: 87 FQLQG--LLDLFSIDTSLSLAK--GTFHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLND 141
+ G ++ ++ + + F GQG +WP N+C DC+ LPT + F +
Sbjct: 94 LKRFGNDWVEFGWVNHLIVSGQNGAAFDGQGAASWPFNKCPIRKDCKVLPTSVLFVNNKN 153
Query: 142 STITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADSSK----------- 180
+ + SV+S++FH+ +L C K++ +KI+A H + S
Sbjct: 154 MVVQNVASVNSKFFHMALLQCSGAKISGVKISAPESSPNTDGIHIERSNGVSIADTTIAT 213
Query: 181 ------------DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRV 228
+I V+ V CGPG G+SVGSLG+ + + +V + VR+ TF T NGVR+
Sbjct: 214 GDDCISIGQGNDNIDVARVHCGPGHGMSVGSLGRYVGEGDVTRIHVRDMTFHGTMNGVRI 273
Query: 229 KTWPDSHI-GIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK--PKDSMPNIEIGN-- 283
KTW +S A++ FE++VMN+V+NPI+IDQ YCPY C K ++ +++ N
Sbjct: 274 KTWENSPTKSNAAHMLFENLVMNDVQNPIIIDQKYCPYYNCEHKFVSGVTIKDVQFKNIK 333
Query: 284 -----------------RNLVYNGVNVKVEGPE-TTSLCSNVKPTLFGKQIPATC 320
+ +V V+++ +G ++S C NV+ G Q P C
Sbjct: 334 GTATTQVAVLLKCGVPCQGVVLQDVDLRYKGNGVSSSKCENVRAKYAGFQNPKPC 388
>gi|255576394|ref|XP_002529089.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223531440|gb|EEF33273.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 393
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/310 (32%), Positives = 159/310 (51%), Gaps = 54/310 (17%)
Query: 8 SLLVSFITSVRGID-ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK-GTVLV 65
SLL++F+ + AT NV ++GA DG TD +KAF SW++A IK TV V
Sbjct: 9 SLLIAFLIFLFTSSLATAARFNVLNYGAKPDGRTDSTKAFLASWKQACG--SIKPATVYV 66
Query: 66 PPGKYLVSFAEFEGPCKA-SISFQLQGLLD---------------LFSIDTSLSLAKGTF 109
P G++ + EF+GPCK+ +I F+++G L F + ++++ G
Sbjct: 67 PSGRFFLKNVEFQGPCKSNAILFRIEGTLFAPSDYRVIGNAGYWLYFKHVSGVTVSGGIL 126
Query: 110 HGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLND 169
GQG W KN + + F+ + I+G+ S++S++FH+ I GC N+K+
Sbjct: 127 DGQGPGLWSCKSSGKNCPTGAAS-LGFSNSENIVISGVTSLNSQFFHMVINGCQNVKIQG 185
Query: 170 LKITAHADSSK---------------------------------DILVSEVFCGPGQGIS 196
+ ++A +S ++ + ++ CGPG GIS
Sbjct: 186 VTVSASGNSPNTDGIHVQLSSGVTILNSRIRTGDDCISIGPGTINMWIEKIACGPGHGIS 245
Query: 197 VGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPI 256
+GSLG +K+ V +TV+ FT T+NGVR+K+W G A N F+D++M NV+NPI
Sbjct: 246 IGSLGNDLKEPGVQNVTVKTVIFTGTTNGVRIKSWARPSSGFARNIIFQDVLMTNVQNPI 305
Query: 257 VIDQLYCPYN 266
VIDQ YCP N
Sbjct: 306 VIDQNYCPDN 315
>gi|356558193|ref|XP_003547392.1| PREDICTED: uncharacterized protein LOC100789777 [Glycine max]
Length = 761
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 150/303 (49%), Gaps = 56/303 (18%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPC--K 82
+++NV FGA DG D ++AF +WR ++ +L+P G+++VS F GPC
Sbjct: 50 KIVNVLSFGAKPDGKFDCTQAFMDAWRATCK-SNVQARLLIPQGRFVVSTMFFAGPCLTP 108
Query: 83 ASISFQLQGL---------------LDLFSIDTSLSLAKGTFHGQGETAWPLNQ-CHKNS 126
I+ Q+ G L +D + GTF G G+ +W + C +
Sbjct: 109 GPITIQVVGTVVATTDISEYVNGEWLMFEDLDGVKLIGGGTFDGMGKESWATTENCEADQ 168
Query: 127 D---CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSSK--- 180
+ P+ I F+ + + I IKSV+ + FH + C N++L LK+TA A S
Sbjct: 169 TDTCVRNPSSIYFHKVRNGIIQNIKSVNPKGFHFFVTNCANIRLRLLKLTAPATSPNTDG 228
Query: 181 ------------------------------DILVSEVFCGPGQGISVGSLGKGIKDEEVV 210
+I ++++ CGPG GIS+GSLGK ++EV
Sbjct: 229 IHISNSIDVKLSKNTIETGDDCVSMIQGVNNITINKLKCGPGHGISIGSLGKYADEQEVK 288
Query: 211 GLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLY-CPYNKCN 269
+ V+NCT T+NG+R+KTWPD + G AS TF DIVM NV+NPI+IDQ Y C C
Sbjct: 289 DIRVKNCTMVGTTNGLRIKTWPDKYPGSASAITFSDIVMENVKNPIIIDQEYDCEPANCQ 348
Query: 270 IKP 272
KP
Sbjct: 349 KKP 351
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 115/248 (46%), Gaps = 34/248 (13%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCK--AS 84
N+ +GAVADG TD S AF +W +A + G T VP G + + F GPC S
Sbjct: 467 FNLTRYGAVADGRTDSSSAFLAAWEDACSHTG-SSTFFVPKGTFFLGPVSFSGPCHNNGS 525
Query: 85 ISFQLQGLLDL-FSIDTSLSL-----------------AKGTFHGQGETAWPLNQCHKNS 126
++ G L S++ +L +K T QG+ +W C++
Sbjct: 526 PKIEIMGTLKAPISLNDFPTLEWVVFKNLNGFNLPGLNSKATLDAQGQESWSKAACYRVM 585
Query: 127 DCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLN-DLKITAHADSSKDILV 184
C +PT ++F +++ ++ I ++S+ H++I C N+ + A S +I V
Sbjct: 586 KCHNIPTALKFLNVSNGSVRNISLLNSKAAHVSIHKCENIDFSVGDDCVAIGPGSTNISV 645
Query: 185 SEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTF 244
S V CGPG GISVG LGK +++V G+ + NC T NGVR S
Sbjct: 646 SFVHCGPGHGISVGILGKSSNEKDVAGVHISNCIINGTKNGVR-----------PSQVKL 694
Query: 245 EDIVMNNV 252
ED+ N+
Sbjct: 695 EDVSFENI 702
>gi|413943663|gb|AFW76312.1| hypothetical protein ZEAMMB73_300465 [Zea mays]
Length = 410
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 154/327 (47%), Gaps = 63/327 (19%)
Query: 4 AARFSLLVSFITSVRGIDATNR-----------VLNVKDFGAVADGITDDSKAFDTSWRE 52
A R L++ +V G A ++ ++ GA +G TD +KA +W
Sbjct: 7 AMRALFLLALFCTVHGEKAKSKDNDSKASGPGGSFDITKLGASGNGKTDSTKAVQEAWAS 66
Query: 53 AWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLL----------------DLF 96
A G K T+L+P G +LV F GPCK ++ Q+ G L ++
Sbjct: 67 ACGGTG-KQTILIPKGDFLVGPLNFTGPCKGDVTIQVNGNLLATTDLSQYKDHGNWIEIL 125
Query: 97 SIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYF 155
+D + KG GQG W N C K DC+ LP + +F+N+ ++GI ++S++F
Sbjct: 126 RVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLLNSKFF 185
Query: 156 HINILGCYNLKLNDLKITAHADS---------------------------------SKDI 182
H+N+ C ++ + D+ +TA DS + +
Sbjct: 186 HMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGPGTSKV 245
Query: 183 LVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPD-SHIGIASN 241
++ V CGPG GIS+GSLG+ +++V + V++CT T+NGVR+K + D + + AS
Sbjct: 246 NITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASVLTASK 305
Query: 242 FTFEDIVMNNVENPIVIDQLYCPYNKC 268
+E+I M + PI+ID YCP C
Sbjct: 306 IHYENIKMEDSGYPIIIDMKYCPNKLC 332
>gi|449525182|ref|XP_004169597.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Cucumis
sativus]
Length = 399
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 148/298 (49%), Gaps = 53/298 (17%)
Query: 20 IDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEG 79
+DA++ NV D G DG TD ++AF T+W A K T+ VP G+Y + F G
Sbjct: 28 VDASS--YNVVDVGGKGDGTTDSTQAFQTAWTNAC-ASTKKATIYVPRGRYCLQNVTFSG 84
Query: 80 PCKA-SISFQLQGLLD---------------LFSIDTSLSLAKGTFHGQGETAWPLNQCH 123
PCK +I F++ G ++ +F +++ G+ G+G W
Sbjct: 85 PCKXKAIIFRIDGSMEAPSDYLVIGNSAAWVVFRHVDGMTILGGSLDGKGAALWACKNSS 144
Query: 124 KNSDCQL-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA-------- 174
N+ C T + F+ + + +KS++S+ FH+ I GC N+ + L+++A
Sbjct: 145 YNALCPTGATTLEFSNSKNVVVNNLKSLNSQMFHVAINGCENVMVKGLRVSASSNSPNTD 204
Query: 175 --HADSSKDILV-----------------------SEVFCGPGQGISVGSLGKGIKDEEV 209
H SS ++ + + CGPG GIS+GSLGK +K+ V
Sbjct: 205 GIHVQSSSNVTIINSKIGTGDDCISVGPGVSNLQIQNISCGPGHGISIGSLGKDVKEIGV 264
Query: 210 VGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
+T++N F+ T NGVR+KTW G A++ F+ IVMNNV NPIVIDQ YCP +K
Sbjct: 265 QNVTIKNVVFSRTENGVRIKTWGKPSNGFATDIVFQHIVMNNVHNPIVIDQNYCPTHK 322
>gi|399764462|gb|AFP50431.1| polygalacturonase 3, partial [Medicago noeana]
Length = 236
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/213 (42%), Positives = 116/213 (54%), Gaps = 40/213 (18%)
Query: 91 GLLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPT-PIRFNFLNDSTITGIKS 149
G +D F++ KG F G GETAW N C KNS C+ + + FNFL S + I S
Sbjct: 26 GYVDYFTLS-----GKGVFDGNGETAWRQNDCGKNSTCKRRSMNLGFNFLKHSIVQDITS 80
Query: 150 VDSRYFHINILGCYNLKLNDLKITAHADS------------------------------- 178
DS+ FH+N+LGC N + ITA A S
Sbjct: 81 KDSKNFHVNVLGCTNFTFDGFTITAPATSINTDGIHIGRSTDVKVLNTNIATGDDCISLG 140
Query: 179 --SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDS-H 235
S+ I V V CGPG GISVGSLGK +K+E V + V+NCTF+ T NGVR+KTWP S
Sbjct: 141 QGSRQITVQNVNCGPGHGISVGSLGKYLKEETVEHVLVKNCTFSNTDNGVRIKTWPTSPG 200
Query: 236 IGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
++ FEDI+M NV NP++IDQ YCP+N+C
Sbjct: 201 TSPITDMHFEDIIMVNVRNPVIIDQEYCPWNQC 233
>gi|413943672|gb|AFW76321.1| zea m 13 allergen [Zea mays]
Length = 410
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 150/323 (46%), Gaps = 56/323 (17%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNR----VLNVKDFGAVADGITDDSKAFDTSWREAWNW 56
L L F ++ +GIDA ++ GA +G TD +KA +W A
Sbjct: 11 LFLLVLFCIVHGEKEESKGIDAKASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGG 70
Query: 57 DGIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLL----------------DLFSIDT 100
G K T+L+P G +LV F GPCK ++ Q+ G L ++ +D
Sbjct: 71 TG-KQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYKEHGNWIEILRVDN 129
Query: 101 SLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINI 159
+ KG GQG W N C K DC+ LP + +F+N+ ++GI ++S++FH+N+
Sbjct: 130 LVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGITLLNSKFFHMNM 189
Query: 160 LGCYNLKLNDLKITAHADS---------------------------------SKDILVSE 186
C N+ + D+ +TA DS + + ++
Sbjct: 190 YQCKNMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNITG 249
Query: 187 VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPD-SHIGIASNFTFE 245
V CGPG GIS+GSLG+ +++V + V++CT T GVR+K + D + + S +E
Sbjct: 250 VTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASVLTVSKIHYE 309
Query: 246 DIVMNNVENPIVIDQLYCPYNKC 268
+I M + NPI ID YCP C
Sbjct: 310 NIKMEDSANPIFIDMKYCPNKLC 332
>gi|162459708|ref|NP_001105862.1| exopolygalacturonase precursor [Zea mays]
gi|89892725|gb|ABD79096.1| Zea m 13 allergen [Zea mays]
gi|413943662|gb|AFW76311.1| exopolygalacturonase Precursor [Zea mays]
Length = 410
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 166/363 (45%), Gaps = 77/363 (21%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
++ GA +G TD +KA +W A G K T+L+P G +LV F GPCK ++
Sbjct: 41 FDITKLGASGNGKTDSTKAVQEAWASACGGTG-KQTILIPKGDFLVGPLNFTGPCKGDVT 99
Query: 87 FQLQGLL----------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQ- 129
Q+ G L ++ +D + KG GQG W N C K DC+
Sbjct: 100 IQVNGNLLATTDLSQYKDHGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKI 159
Query: 130 LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----------- 178
LP + +F+N+ ++GI ++S++FH+N+ C ++ + D+ +TA DS
Sbjct: 160 LPNSLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDS 219
Query: 179 ----------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRN 216
+ + ++ V CGPG GIS+GSLG+ +++V + V++
Sbjct: 220 SGVTITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKD 279
Query: 217 CTFTCTSNGVRVKTWPD-SHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC------- 268
CT T+NGVR+K + D + + AS +E+I M + PI+ID YCP C
Sbjct: 280 CTLKKTANGVRIKAYEDAASVLTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASK 339
Query: 269 ---------NIKPKDSMP-------NIEIGNRNLVYNGVNVKVEGP--ETTSLCSNVKPT 310
NI S P + +I + + VN+K G +T ++C N K +
Sbjct: 340 VTVKDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGS 399
Query: 311 LFG 313
G
Sbjct: 400 AKG 402
>gi|212275802|ref|NP_001130136.1| uncharacterized protein LOC100191230 precursor [Zea mays]
gi|194688374|gb|ACF78271.1| unknown [Zea mays]
gi|223946699|gb|ACN27433.1| unknown [Zea mays]
gi|224033665|gb|ACN35908.1| unknown [Zea mays]
gi|413948197|gb|AFW80846.1| exopolygalacturonase [Zea mays]
Length = 416
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 112/333 (33%), Positives = 163/333 (48%), Gaps = 56/333 (16%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKAS-I 85
++ GA +DG TD +KA +W A G TV++P G YLV F GPCK S I
Sbjct: 48 FDISKLGATSDGKTDCTKAVQDAWTSACEATG-SATVVIPKGDYLVGPLNFTGPCKGSNI 106
Query: 86 SFQLQGLL--------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLP 131
+ QL G L +L ++ GT GQG + ++ N
Sbjct: 107 AIQLDGNLLGSNDLDKYTASWIELSHVNNIGITGSGTLDGQGTAVYSKSK-TDNVKAMPN 165
Query: 132 TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD-----------SSK 180
T + F+ +N +T+ GIK ++S++FHINI ++ + D+ ITA AD SSK
Sbjct: 166 TLVLFHVIN-ATVAGIKLLNSKFFHINIDNSESITVKDVNITAPADVENTDGVHVGGSSK 224
Query: 181 ----------------------DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCT 218
+LV + CGPGQGISVG LG+ +++V +TVRNC
Sbjct: 225 ISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCV 284
Query: 219 FTCTSNGVRVKTWPDSH-IGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMP 277
T+NGVR+K++ D+ + AS+ TFE+I M V NPIVIDQ +CP C K +S
Sbjct: 285 LKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVCPGKRSNSS- 343
Query: 278 NIEIGNRNLVYNGVNVKVEGPETTS-LCSNVKP 309
+ +++ + + PE S LCS +P
Sbjct: 344 --HVSVKDVTFRNITGTSSTPEAISLLCSETQP 374
>gi|548493|sp|P35339.1|PGLR3_MAIZE RecName: Full=Exopolygalacturonase; Short=ExoPG; AltName:
Full=Galacturan 1,4-alpha-galacturonidase; AltName:
Full=Pectinase; Flags: Precursor
gi|288612|emb|CAA47052.1| polygalacturonase [Zea mays]
Length = 410
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 165/363 (45%), Gaps = 77/363 (21%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
++ GA +G TD +KA +W A G K T+L+P G +LV F GPCK ++
Sbjct: 41 FDITKLGASGNGKTDSTKAVQEAWASACGGTG-KQTILIPKGDFLVGPLNFTGPCKGDVT 99
Query: 87 FQLQGLL----------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQ- 129
Q+ G L ++ +D + KG GQG W N C K DC+
Sbjct: 100 IQVNGNLLATTDLSQYKDHGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKI 159
Query: 130 LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----------- 178
LP + +F+N+ ++GI ++S++FH+N+ C ++ + D+ +TA DS
Sbjct: 160 LPNSLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDS 219
Query: 179 ----------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRN 216
+ + ++ V CGPG GIS+GSLG+ +++V + V++
Sbjct: 220 SGVTITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKD 279
Query: 217 CTFTCTSNGVRVKTWPD-SHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC------- 268
CT T+NGVR+K + D + + AS +E+I M + PI+ID YCP C
Sbjct: 280 CTLKKTANGVRIKAYEDAASVLTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASK 339
Query: 269 ---------NIKPKDSMPN-------IEIGNRNLVYNGVNVKVEGP--ETTSLCSNVKPT 310
NI S P +I + + VN+K G +T ++C N K +
Sbjct: 340 VTVKDVTFKNITGTSSTPEAVNLLCTAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGS 399
Query: 311 LFG 313
G
Sbjct: 400 AKG 402
>gi|242060866|ref|XP_002451722.1| hypothetical protein SORBIDRAFT_04g006610 [Sorghum bicolor]
gi|241931553|gb|EES04698.1| hypothetical protein SORBIDRAFT_04g006610 [Sorghum bicolor]
Length = 462
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 145/291 (49%), Gaps = 50/291 (17%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
L++ GA DG +D + +W+ A + G++ +++PPG YL E +GPCK+SI
Sbjct: 95 LDIAQLGAKGDGKSDSTPMILKAWKNACDATGVQ-KIVIPPGNYLTGGLELKGPCKSSII 153
Query: 87 FQLQGLL--------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LP 131
+L G L ++ ++D GT GQG W N C + +C+ LP
Sbjct: 154 IRLDGNLLGTGDLNAYKRNWIEIENVDNLSINGHGTIDGQGSLVWNKNDCQHSYNCKVLP 213
Query: 132 TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------- 178
+ +F+ ++ I GI +S++FH+NI N+ ++ + + A +S
Sbjct: 214 NSLVLDFVTNAQIRGITLANSKFFHLNIFASKNVLIDKVTVKAPGNSPNTDGIHMGDSEN 273
Query: 179 --------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCT 218
SK I + V CGPG GISVGSLG+ +++V + V+ CT
Sbjct: 274 VTISGTTIGVGDDCISIGPGSKTIRIDGVKCGPGHGISVGSLGRYKDEKDVEDVKVKGCT 333
Query: 219 FTCTSNGVRVKTWPDSHIG-IASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
T+NG+R+K++ DS + F +ED+ M+NV PI+IDQ YCP N C
Sbjct: 334 LVGTTNGLRIKSYEDSKSSPKVTKFVYEDVTMDNVSYPIIIDQKYCPNNIC 384
>gi|548492|sp|P35338.1|PGLR2_MAIZE RecName: Full=Exopolygalacturonase; Short=ExoPG; AltName:
Full=Galacturan 1,4-alpha-galacturonidase; AltName:
Full=Pectinase; Flags: Precursor
gi|288379|emb|CAA45751.1| polygalacturonase [Zea mays]
Length = 410
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 150/323 (46%), Gaps = 56/323 (17%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNR----VLNVKDFGAVADGITDDSKAFDTSWREAWNW 56
L L F ++ +GIDA ++ GA +G TD +KA +W A
Sbjct: 11 LFLLVLFCIVHGEKEESKGIDAKASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGG 70
Query: 57 DGIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLL----------------DLFSIDT 100
G K T+L+P G +LV F GPCK ++ Q+ G L ++ +D
Sbjct: 71 TG-KQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYKEHGNWIEILRVDN 129
Query: 101 SLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINI 159
+ KG GQG W N C K DC+ LP + +F+N+ ++G+ ++S++FH+N+
Sbjct: 130 LVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNM 189
Query: 160 LGCYNLKLNDLKITAHADS---------------------------------SKDILVSE 186
C N+ + D+ +TA DS + + ++
Sbjct: 190 YQCKNMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNITG 249
Query: 187 VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPD-SHIGIASNFTFE 245
V CGPG GIS+GSLG+ +++V + V++CT T GVR+K + D + + S +E
Sbjct: 250 VTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASVLTVSKIHYE 309
Query: 246 DIVMNNVENPIVIDQLYCPYNKC 268
+I M + NPI ID YCP C
Sbjct: 310 NIKMEDSANPIFIDMKYCPNKLC 332
>gi|413943673|gb|AFW76322.1| exopolygalacturonase8 [Zea mays]
Length = 410
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 150/323 (46%), Gaps = 56/323 (17%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNR----VLNVKDFGAVADGITDDSKAFDTSWREAWNW 56
L L F ++ +GIDA ++ GA +G TD +KA +W A
Sbjct: 11 LFLLVLFCIVHGEKEESKGIDAKASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGG 70
Query: 57 DGIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLL----------------DLFSIDT 100
G K T+L+P G +LV F GPCK ++ Q+ G L ++ +D
Sbjct: 71 TG-KQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYKEHGNWIEILRVDN 129
Query: 101 SLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINI 159
+ KG GQG W N C K DC+ LP + +F+N+ ++G+ ++S++FH+N+
Sbjct: 130 LVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNM 189
Query: 160 LGCYNLKLNDLKITAHADS---------------------------------SKDILVSE 186
C N+ + D+ +TA DS + + ++
Sbjct: 190 YQCKNMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNITG 249
Query: 187 VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPD-SHIGIASNFTFE 245
V CGPG GIS+GSLG+ +++V + V++CT T GVR+K + D + + S +E
Sbjct: 250 VTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASVLTVSKIHYE 309
Query: 246 DIVMNNVENPIVIDQLYCPYNKC 268
+I M + NPI ID YCP C
Sbjct: 310 NIKMEDSANPIFIDMKYCPNKLC 332
>gi|226502274|ref|NP_001141808.1| uncharacterized protein LOC100273946 precursor [Zea mays]
gi|194706004|gb|ACF87086.1| unknown [Zea mays]
gi|413926246|gb|AFW66178.1| hypothetical protein ZEAMMB73_043712 [Zea mays]
Length = 418
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 165/333 (49%), Gaps = 56/333 (16%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
L++ GA DG +D + +W+ A G + +++P G YL + GPCK+SI
Sbjct: 51 LDIAQLGAKGDGKSDSTPMVLKAWKHACEATG-QQKIVIPKGNYLTGALDLVGPCKSSII 109
Query: 87 FQLQGLL--------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LP 131
+L G L ++ ++D GT GQG W N+C ++ +C+ LP
Sbjct: 110 IRLDGNLLGTGDLNAYKRNWIEIQNVDNLSINGHGTIDGQGALVWNKNECQRSYNCKILP 169
Query: 132 TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------- 178
+ +F+ ++ I GI ++S++FH+NI G N+ ++ + I A +S
Sbjct: 170 NSLVLDFVTNAQIRGITLLNSKFFHMNIFGSKNVVIDKVTIKAPGNSPNTDGIHIGDSSN 229
Query: 179 --------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCT 218
SK I V V CGPG GISVGSLG+ +++V + V CT
Sbjct: 230 VTISGTTIAVGDDCVSIGPGSKTIRVKGVKCGPGHGISVGSLGRYKDEKDVEDVKVTGCT 289
Query: 219 FTCTSNGVRVKTWPDSHIGI-ASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMP 277
T+NG+R+K++ DS + A+ F ++D+ M+NV PI+IDQ YCP N C +K S
Sbjct: 290 LAGTTNGLRIKSYEDSKSSLKATKFLYQDVTMDNVSYPIIIDQKYCPNNIC-VKSGAS-- 346
Query: 278 NIEIGNRNLVYNGVNVKVEGPETTSL-CSNVKP 309
++ ++V+ ++ PE +L C+N P
Sbjct: 347 --KVAVNDVVFKNIHGTSNTPEAITLNCANNLP 377
>gi|399764464|gb|AFP50432.1| polygalacturonase 3, partial [Medicago arabica]
Length = 236
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 117/213 (54%), Gaps = 40/213 (18%)
Query: 91 GLLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPT-PIRFNFLNDSTITGIKS 149
G +D F++ L KG F G GETAW LN C KNS C+ + FNFL S + I S
Sbjct: 26 GYVDYFTL-----LGKGVFDGNGETAWRLNDCGKNSKCKRRSMNFGFNFLKHSIVRDITS 80
Query: 150 VDSRYFHINILGCYNLKLNDLKITAHADS------------------------------- 178
DS+ FH+N+LGC N + ITA A S
Sbjct: 81 KDSKNFHVNVLGCTNFTFDGFTITAPATSINTDGIHIGRSTDVKVLNTNIATGDDCISLG 140
Query: 179 --SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDS-H 235
S+ I+V V CGPG GISVGSLGK K+E V + V+NCT + T NG+R+KTWP+S
Sbjct: 141 QGSRQIIVQNVNCGPGHGISVGSLGKNPKEEAVEHVLVKNCTISNTDNGLRIKTWPNSPG 200
Query: 236 IGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
++ FEDI+M NV+ P++IDQ YCP+N+C
Sbjct: 201 TSPITDMHFEDIIMVNVKTPVIIDQEYCPWNQC 233
>gi|315143143|gb|ADT82706.1| endopolygalacturonase [Prunus armeniaca]
Length = 393
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 99/310 (31%), Positives = 148/310 (47%), Gaps = 50/310 (16%)
Query: 7 FSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP 66
FSL + F+ + AT NV GA ADG TD +KAF ++W +A G + VP
Sbjct: 8 FSLSLIFVFMINSAIATPVTYNVASLGAKADGKTDSTKAFLSAWAKACASMN-PGVIYVP 66
Query: 67 PGKYLVSFAEFEGPCKA-SISFQLQGLLD---------------LFSIDTSLSLAKGTFH 110
G + + F GPCK +I+F++ G L F ++++ G
Sbjct: 67 AGTFFLRDVVFSGPCKNNAITFRIAGTLVAPSDYRVIGNAANWIFFHHVNGVTISGGILD 126
Query: 111 GQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
GQG W H S T + F+ N+ ++G+ S++S+ FHI I C N+++ +
Sbjct: 127 GQGTALWACKASHGESCPSGATTLSFSDSNNIVVSGLASLNSQMFHIVINDCQNVQMQGV 186
Query: 171 KITAHADS---------------------------------SKDILVSEVFCGPGQGISV 197
+++A +S + ++ + V CGPG GIS+
Sbjct: 187 RVSASGNSPNTDGIHVQMSSGVTILNSKIATGDDCISIGPGTSNLWIESVACGPGHGISI 246
Query: 198 GSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIV 257
GSLGK ++ V +TV+ TFT T NG+R+K+W G A N F+ M NVENPI+
Sbjct: 247 GSLGKEQEEAGVQNVTVKTVTFTGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPII 306
Query: 258 IDQLYCPYNK 267
IDQ YCP NK
Sbjct: 307 IDQHYCPDNK 316
>gi|115444829|ref|NP_001046194.1| Os02g0196700 [Oryza sativa Japonica Group]
gi|113535725|dbj|BAF08108.1| Os02g0196700 [Oryza sativa Japonica Group]
Length = 449
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 161/333 (48%), Gaps = 56/333 (16%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
L++ GA DG +D + +W+ A N G + +++PPG YL +GPC +SI
Sbjct: 82 LDIAQLGAKGDGTSDSTAFVLQAWKNACNATGTQ-KIVIPPGNYLTGALNLKGPCTSSII 140
Query: 87 FQLQGLL--------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LP 131
+L G L ++ +D G GQG W NQC+KN +C+ LP
Sbjct: 141 LRLDGNLLGTGDLNAYKTNWIEVEHVDNFAINGHGIIDGQGPLVWTHNQCNKNYNCKILP 200
Query: 132 TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------- 178
+ ++ + T+ GI +S++FH+NI N+ ++ + IT+ DS
Sbjct: 201 NSLVIDYSTNVTVRGITLKNSKFFHLNIYESKNVVIDKVTITSPGDSPNTDGIHVGDSTN 260
Query: 179 --------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCT 218
+K + V+ V CGPG GISVGSLG+ +++V + V NCT
Sbjct: 261 ITISSTTIAAGDDCISIGPGTKMVRVNGVRCGPGHGISVGSLGRYKDEKDVEDIIVTNCT 320
Query: 219 FTCTSNGVRVKTWPDSHIGI-ASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMP 277
T+NG+R+K++ DS + A+ F ++ I M+NV PI+IDQ YCP N C+ +
Sbjct: 321 IKGTTNGLRIKSYEDSKSQLRATKFLYDGITMDNVSYPIIIDQKYCPNNICSASGTSKVA 380
Query: 278 NIEIGNRNLVYNGVNVKVEGPETTSL-CSNVKP 309
+I +N+V PE +L C+N P
Sbjct: 381 VTDIVFKNIVGTSAT-----PEAVTLNCANNLP 408
>gi|115468924|ref|NP_001058061.1| Os06g0611500 [Oryza sativa Japonica Group]
gi|51090902|dbj|BAD35507.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|51091974|dbj|BAD35503.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113596101|dbj|BAF19975.1| Os06g0611500 [Oryza sativa Japonica Group]
gi|215704268|dbj|BAG93108.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 425
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 153/313 (48%), Gaps = 54/313 (17%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
++ GAV +G D + A +WR A G K T+L+P G ++ E GPC +++
Sbjct: 54 FDITKLGAVGNGRADSTGAVMAAWRSACAGAG-KQTILIPKGDFMTGAMELRGPCNGAVT 112
Query: 87 FQLQGLL------------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDC 128
QL G L ++ +D + KG GQG W N C KN +C
Sbjct: 113 IQLDGNLLGSNDLSKYPGKKMPNWVEVRHVDNFVISGKGKLDGQGPGVWSKNSCAKNYNC 172
Query: 129 QL-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--------- 178
+L P + N +ND ++GI +++++FH+NI C ++K++ + I A DS
Sbjct: 173 KLLPNTLVLNTVNDGVVSGITLLNAKFFHMNIYRCKDIKISGVTINAPGDSPNTDGIHMG 232
Query: 179 ------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTV 214
+ + ++ V CGPG GIS+GSLG+ + +V ++V
Sbjct: 233 DSSKITIAATTIGTGDDCISIGPGTDGVNITGVTCGPGHGISIGSLGRYKDERDVRDVSV 292
Query: 215 RNCTFTCTSNGVRVKTWPDSHIGIA-SNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPK 273
C T+NG+R+K++ DS + S +++ +VM++V+NPI+IDQ YCP + C K
Sbjct: 293 TRCVLRKTTNGLRIKSYEDSVSPVTVSKVSYDGVVMDHVDNPIIIDQKYCPNSICTSKGD 352
Query: 274 DSMPNIEIGNRNL 286
+ ++ RN+
Sbjct: 353 SKVSVRDVTFRNI 365
>gi|222635874|gb|EEE66006.1| hypothetical protein OsJ_21955 [Oryza sativa Japonica Group]
Length = 416
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 153/313 (48%), Gaps = 54/313 (17%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
++ GAV +G D + A +WR A G K T+L+P G ++ E GPC +++
Sbjct: 45 FDITKLGAVGNGRADSTGAVMAAWRSACAGAG-KQTILIPKGDFMTGAMELRGPCNGAVT 103
Query: 87 FQLQGLL------------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDC 128
QL G L ++ +D + KG GQG W N C KN +C
Sbjct: 104 IQLDGNLLGSNDLSKYPGKKMPNWVEVRHVDNFVISGKGKLDGQGPGVWSKNSCAKNYNC 163
Query: 129 QL-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--------- 178
+L P + N +ND ++GI +++++FH+NI C ++K++ + I A DS
Sbjct: 164 KLLPNTLVLNTVNDGVVSGITLLNAKFFHMNIYRCKDIKISGVTINAPGDSPNTDGIHMG 223
Query: 179 ------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTV 214
+ + ++ V CGPG GIS+GSLG+ + +V ++V
Sbjct: 224 DSSKITIAATTIGTGDDCISIGPGTDGVNITGVTCGPGHGISIGSLGRYKDERDVRDVSV 283
Query: 215 RNCTFTCTSNGVRVKTWPDSHIGIA-SNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPK 273
C T+NG+R+K++ DS + S +++ +VM++V+NPI+IDQ YCP + C K
Sbjct: 284 TRCVLRKTTNGLRIKSYEDSVSPVTVSKVSYDGVVMDHVDNPIIIDQKYCPNSICTSKGD 343
Query: 274 DSMPNIEIGNRNL 286
+ ++ RN+
Sbjct: 344 SKVSVRDVTFRNI 356
>gi|255576398|ref|XP_002529091.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223531442|gb|EEF33275.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 392
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 151/309 (48%), Gaps = 56/309 (18%)
Query: 9 LLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG 68
LLVSF TS + + NV +FGA DG TD +KAF +W +A T+ VP G
Sbjct: 13 LLVSF-TSYSAMASVQ--YNVLNFGAKPDGKTDSAKAFLAAWTQACA-STKSSTIYVPNG 68
Query: 69 KYLVSFAEFEGPCKA-SISFQLQGLLD---------------LFSIDTSLSLAKGTFHGQ 112
++ +S F+GPCK +I F + G L +F ++++ GT GQ
Sbjct: 69 RFFLSKIAFQGPCKNNAIGFSIGGTLVAPSDYRVLGSAKNWIIFQHVNGVTVSGGTLDGQ 128
Query: 113 GETAWPLNQCHKNSDCQL-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLK 171
G W K+ C T + F N+ I G+ S++S+ FHI I C N+K+ +K
Sbjct: 129 GTGLWSCKASGKS--CPYGATSLEFTNSNNIVIKGLASLNSQLFHIVINECQNVKVQGVK 186
Query: 172 ITAHADS---------------------------------SKDILVSEVFCGPGQGISVG 198
I+A S + ++ + V CGPG GIS+G
Sbjct: 187 ISASGSSPNTDGIHVEASTGVTILSSKIGTGDDCVSIGPGTSNLWIENVACGPGHGISIG 246
Query: 199 SLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVI 258
SLGK ++ V +TV TFT T NGVR+KTW G A + F+ +VMNNV+NPIVI
Sbjct: 247 SLGKDAQENGVQNVTVTASTFTGTDNGVRIKTWGRPSSGFARSIRFQHVVMNNVQNPIVI 306
Query: 259 DQLYCPYNK 267
DQ YCP NK
Sbjct: 307 DQNYCPDNK 315
>gi|49388133|dbj|BAD25264.1| putative exopolygalacturonase precursor [Oryza sativa Japonica
Group]
gi|49388149|dbj|BAD25277.1| putative exopolygalacturonase precursor [Oryza sativa Japonica
Group]
Length = 422
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 161/333 (48%), Gaps = 56/333 (16%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
L++ GA DG +D + +W+ A N G + +++PPG YL +GPC +SI
Sbjct: 55 LDIAQLGAKGDGTSDSTAFVLQAWKNACNATGTQ-KIVIPPGNYLTGALNLKGPCTSSII 113
Query: 87 FQLQGLL--------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LP 131
+L G L ++ +D G GQG W NQC+KN +C+ LP
Sbjct: 114 LRLDGNLLGTGDLNAYKTNWIEVEHVDNFAINGHGIIDGQGPLVWTHNQCNKNYNCKILP 173
Query: 132 TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------- 178
+ ++ + T+ GI +S++FH+NI N+ ++ + IT+ DS
Sbjct: 174 NSLVIDYSTNVTVRGITLKNSKFFHLNIYESKNVVIDKVTITSPGDSPNTDGIHVGDSTN 233
Query: 179 --------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCT 218
+K + V+ V CGPG GISVGSLG+ +++V + V NCT
Sbjct: 234 ITISSTTIAAGDDCISIGPGTKMVRVNGVRCGPGHGISVGSLGRYKDEKDVEDIIVTNCT 293
Query: 219 FTCTSNGVRVKTWPDSHIGI-ASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMP 277
T+NG+R+K++ DS + A+ F ++ I M+NV PI+IDQ YCP N C+ +
Sbjct: 294 IKGTTNGLRIKSYEDSKSQLRATKFLYDGITMDNVSYPIIIDQKYCPNNICSASGTSKVA 353
Query: 278 NIEIGNRNLVYNGVNVKVEGPETTSL-CSNVKP 309
+I +N+V PE +L C+N P
Sbjct: 354 VTDIVFKNIVGTSAT-----PEAVTLNCANNLP 381
>gi|288367|emb|CAA46680.1| polygalacturonase [Zea mays]
Length = 410
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 174/393 (44%), Gaps = 81/393 (20%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNR----VLNVKDFGAVADGITDDSKAFDTSWREAWNW 56
L L F ++ +GIDA ++ GA +G TD +KA +W A
Sbjct: 11 LFLLVLFCIVHGEKEESKGIDAKASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGG 70
Query: 57 DGIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLL----------------DLFSIDT 100
G K T+L+P G +LV F GPCK ++ Q+ G L ++ +D
Sbjct: 71 TG-KQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYKDHGNWIEILRVDN 129
Query: 101 SLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINI 159
+ KG GQG W N C K DC+ LP + +F+N+ ++G+ ++S++FH+N+
Sbjct: 130 LVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNM 189
Query: 160 LGCYNLKLNDLKITAHADS---------------------------------SKDILVSE 186
C ++ + D+ +TA DS + + ++
Sbjct: 190 YRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNITG 249
Query: 187 VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPD-SHIGIASNFTFE 245
V CGPG GIS+GSLG+ +++V + V++CT T GVR+K + D + + S +E
Sbjct: 250 VTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASVLTVSKIHYE 309
Query: 246 DIVMNNVENPIVIDQLYCPYNKC----------------NIKPKDSMPNI-------EIG 282
+I M + NPI ID YCP C NI S P + ++
Sbjct: 310 NIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEVVSLLCTAKVP 369
Query: 283 NRNLVYNGVNVKVEGP--ETTSLCSNVKPTLFG 313
+ + VNV+ G +T ++C+N K + G
Sbjct: 370 CTGVTMDDVNVEYSGTNNKTMAICTNAKGSTKG 402
>gi|87242603|gb|ABD33834.1| polygalacturonase [Prunus domestica subsp. insititia]
Length = 393
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 101/310 (32%), Positives = 148/310 (47%), Gaps = 50/310 (16%)
Query: 7 FSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP 66
FSL + F+ + AT NV GA ADG TD +KAF ++W +A G + VP
Sbjct: 8 FSLSLIFVFMINSAIATPVTYNVASLGAKADGKTDSTKAFLSAWAKACASMN-PGVIYVP 66
Query: 67 PGKYLVSFAEFEGPCKA-SISFQLQGLLD---------------LFSIDTSLSLAKGTFH 110
G + + F GPCK +I+F++ G L F ++++ G
Sbjct: 67 AGTFFLRDVVFSGPCKNNAITFRIAGTLVAPSDYQVIGNAANWIFFHHVNGVTISGGILD 126
Query: 111 GQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
GQG W + S T + F+ N+ ++G+ SV+S+ FHI I C N+++ +
Sbjct: 127 GQGTALWACKASNGKSCPSGATTLSFSDSNNIVVSGLASVNSQMFHIVINDCQNVQMQGV 186
Query: 171 KITAHADS---------------------------------SKDILVSEVFCGPGQGISV 197
K++A +S + ++ + V CGPG GIS+
Sbjct: 187 KVSASGNSPNTDGIHVQMSSGVTILNSKIATGDDCVSIGPGTSNLWIESVACGPGHGISI 246
Query: 198 GSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIV 257
GSLGK ++ V +TV+ TFT T NG+R+K+W G A N F+ M NVENPIV
Sbjct: 247 GSLGKEQEEAGVQNVTVKTVTFTGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIV 306
Query: 258 IDQLYCPYNK 267
IDQ YCP NK
Sbjct: 307 IDQHYCPDNK 316
>gi|147861610|emb|CAN83578.1| hypothetical protein VITISV_027614 [Vitis vinifera]
Length = 391
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 175/396 (44%), Gaps = 96/396 (24%)
Query: 7 FSLLVSFITSVRGID-ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLV 65
F +L+ F+ S + VLNVKD+GAVADG TD+S+AF +W A G +
Sbjct: 11 FCMLMFFLVSTSSVVLGKPAVLNVKDYGAVADGKTDNSRAFLEAWEAACEQQGTSVITVP 70
Query: 66 PPGKYLVSFAEFEGPCKASISFQLQGLLDLFS-----------------IDTSLSLAKGT 108
GKY V F GPCK SI+F +Q DL++ +D
Sbjct: 71 RGGKYYVRQVAFTGPCKGSITFLIQA--DLYAPTDKSSHTLTYWIKFGYVDYLTIAGLAN 128
Query: 109 FHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLN 168
+G G +AWP C + +C P + L ST S Y ++ ++ L+
Sbjct: 129 LYGGGPSAWPYKGCGQGQECLQVVPHDQSMLKIST--------SAYSNVQ-----DVTLS 175
Query: 169 DLKITAHADS---------------------------------SKDILVSEVFCGPGQGI 195
D++ TA DS SKD+ +S CGPG G
Sbjct: 176 DIRTTAPHDSPNTDGVHIAVSERVKILDSTFNTGDDCVAIFSGSKDVNISRSICGPGHGF 235
Query: 196 SVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWP-DSHIGIASNFTFEDIVMNNVEN 254
S+GS+GK ++ + + +RNCT + T NG R+KTW S+ AS+ T +D++M+NV N
Sbjct: 236 SIGSMGKFPDEDPITKINIRNCTISHTDNGFRIKTWAVSSYPTFASDITVQDVMMDNVRN 295
Query: 255 PIVIDQLYCPYNKCN--IKPKDSMPNIEIGN---RNLVYNGVNVKV-------------- 295
PI+IDQ YCP C+ ++ + + N++I + VN++
Sbjct: 296 PIIIDQHYCPRGGCDPTVESQVQIKNLQIKRIWGTSTTETAVNLQCSSQKPCQGVELEDI 355
Query: 296 -------EGPE---TTSLCSNVKPTLFGKQIPATCV 321
EG E S C+ V + GKQ+P C+
Sbjct: 356 LLLFRNPEGGELQPAVSSCAYVVGSSRGKQVPKPCI 391
>gi|15225765|ref|NP_180230.1| pectin lyase-like protein [Arabidopsis thaliana]
gi|2739388|gb|AAC14511.1| putative polygalacturonase [Arabidopsis thaliana]
gi|330252774|gb|AEC07868.1| pectin lyase-like protein [Arabidopsis thaliana]
Length = 402
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 118/377 (31%), Positives = 174/377 (46%), Gaps = 84/377 (22%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKAS 84
+V NV+ G+ DG TD++ AF + W A + VP G + + EF GPCK
Sbjct: 29 KVFNVQRHGSKPDGKTDNTNAFTSIWSRACKRISGSSKIYVPKGTFYLGGVEFVGPCKNP 88
Query: 85 ISFQLQGLL-------DL-------FSIDTSLSLA-KGTFHGQGETAWPLNQCHKNSDC- 128
I F + G L D+ F +LS++ GT GQG+ +WPLN CHKN +C
Sbjct: 89 IEFIIDGTLLAPANPNDIKQDTWINFRYINNLSISGSGTLDGQGKQSWPLNDCHKNPNCP 148
Query: 129 QLPTPIRFNFLNDSTITGIKSVDSRYFH---------------------------INILG 161
+L + F F+N+S I I S++S+ H I +
Sbjct: 149 KLAISMGFAFVNNSNIKDITSLNSKMGHFNFFFVHHFNITGVTITAPSDSPNTDGIKMGS 208
Query: 162 CYNLKLNDLKITAHAD------SSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVR 215
C N+++++ I D + + +S + CGPG GISVGSLGK +++V L VR
Sbjct: 209 CSNIQISNTNIGTGDDCIAILSGTTKLNISNINCGPGHGISVGSLGKNKDEKDVKDLFVR 268
Query: 216 NCTFTCTSNGVRVKTWPDSHIGI-ASNFTFEDIVMNNVENPIVIDQLYCPYNKC------ 268
+ F TS+G+R+KTW S I SNF +E+I M +V PI IDQ YCP+ C
Sbjct: 269 DVIFNGTSDGIRIKTWESSASKILVSNFVYENIQMIDVGKPINIDQKYCPHPPCEHERKS 328
Query: 269 ----------------------NIKPKDSMP--NIEIGNRNLVYNGVNVKVEGPETTSLC 304
N++ S P N+E+ + N+ NG +E + ++C
Sbjct: 329 HVQIQDLKLKNIYGTSKNKVAVNLQCSKSFPCKNVELIDINIKQNG----LEDGSSITVC 384
Query: 305 SNVKPTLFGKQIPATCV 321
NV GK P C+
Sbjct: 385 ENVDGFARGKMFPQHCL 401
>gi|1360705|emb|CAA40851.1| polygalacturonase [Zea mays]
Length = 408
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 174/393 (44%), Gaps = 81/393 (20%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNR----VLNVKDFGAVADGITDDSKAFDTSWREAWNW 56
L L F ++ +GIDA ++ GA +G TD +KA +W A
Sbjct: 9 LFLLVLFCIVHGEKEESKGIDAKASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGG 68
Query: 57 DGIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLL----------------DLFSIDT 100
G K T+L+P G +LV F GPCK ++ Q+ G L ++ +D
Sbjct: 69 TG-KQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYKDHGNWIEILRVDN 127
Query: 101 SLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINI 159
+ KG GQG W N C K DC+ LP + +F+N+ ++G+ ++S++FH+N+
Sbjct: 128 LVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNM 187
Query: 160 LGCYNLKLNDLKITAHADS---------------------------------SKDILVSE 186
C ++ + D+ +TA DS + + ++
Sbjct: 188 YRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNITG 247
Query: 187 VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPD-SHIGIASNFTFE 245
V CGPG GIS+GSLG+ +++V + V++CT T GVR+K + D + + S +E
Sbjct: 248 VTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASVLTVSKIHYE 307
Query: 246 DIVMNNVENPIVIDQLYCPYNKC----------------NIKPKDSMPNI-------EIG 282
+I M + NPI ID YCP C NI S P + ++
Sbjct: 308 NIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEVVSLLCTAKVP 367
Query: 283 NRNLVYNGVNVKVEGP--ETTSLCSNVKPTLFG 313
+ + VNV+ G +T ++C+N K + G
Sbjct: 368 CTGVTMDDVNVEYSGTNNKTMAICTNAKGSTKG 400
>gi|224107090|ref|XP_002314372.1| predicted protein [Populus trichocarpa]
gi|222863412|gb|EEF00543.1| predicted protein [Populus trichocarpa]
Length = 410
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 164/372 (44%), Gaps = 77/372 (20%)
Query: 21 DATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGP 80
D +V NV +GA G D + +F +WR A N+ G +L+P G +L+ F+GP
Sbjct: 43 DPNEKVFNVLQYGAKPGGKQDSALSFIRAWRAACNYRGT-ARLLIPMGTFLIGATIFQGP 101
Query: 81 C--KASISFQLQGLLD--------------LFS-IDTSLSLAKGTFHGQGETAWPLNQCH 123
C I Q+ G L LF I+ L GT GQG W N
Sbjct: 102 CLGPVPIKVQIAGTLKAVPDPSMYEEDFWILFEKINGLLVTGTGTVDGQGNAVWKYN--- 158
Query: 124 KNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----- 178
+ + P+ I+FN + + I I SV+ FHI+I+ N++ +L ITA A S
Sbjct: 159 -DGGSRFPSSIKFNHVVNGIIRQITSVNPMGFHISIVLSQNIRAKNLHITAPATSPNTDG 217
Query: 179 ----------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVV 210
S D+ + +V CGPG G SVGSLGK +++V
Sbjct: 218 IHISQSSVVKVSRSVISTGDDCVAIIQGSTDVSIKKVTCGPGHGFSVGSLGKYPDEKDVR 277
Query: 211 GLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNI 270
G+ V NCT NGVR+KTW S ASN F+DI+M+NV+ PI+IDQ Y +
Sbjct: 278 GVVVTNCTLRNADNGVRIKTWGGSPPSQASNILFQDIIMDNVKRPIIIDQTYGSKSNSPS 337
Query: 271 KPK-------------------DSMPNIEIGNRNLVYNGVNVKVEGPET---TSLCSNVK 308
+ K D M + + L ++ +N+K G + TS C+N K
Sbjct: 338 RVKISDVRYINIRGTSASAVAVDLMCSKTVPCEKLYFSNINLKYYGQKKLPFTSTCTNAK 397
Query: 309 PTLFGKQIPATC 320
G Q P C
Sbjct: 398 VNYAGYQFPPPC 409
>gi|3747093|gb|AAC64184.1| endopolygalacturonase [Prunus persica]
gi|337730173|gb|AEI70577.1| endo-polygalacturonase [Prunus persica]
gi|337730175|gb|AEI70578.1| endo-polygalacturonase [Prunus persica]
gi|337730177|gb|AEI70579.1| endo-polygalacturonase [Prunus persica]
gi|337730179|gb|AEI70580.1| endo-polygalacturonase [Prunus persica]
Length = 393
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 148/310 (47%), Gaps = 50/310 (16%)
Query: 7 FSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP 66
FSL + F+ + AT NV GA ADG TD +KAF ++W +A G + VP
Sbjct: 8 FSLSLIFVFMINSAIATPVTYNVASLGAKADGKTDSTKAFLSAWAKACASMN-PGVIYVP 66
Query: 67 PGKYLVSFAEFEGPCKA-SISFQLQGLLD---------------LFSIDTSLSLAKGTFH 110
G + + F GPCK +I+F++ G L F ++++ G
Sbjct: 67 AGTFFLRDVVFSGPCKNNAITFRIAGTLVAPSDYRVIGNAANWIFFHHVNGVTISGGILD 126
Query: 111 GQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
GQG W H S T + F+ N+ ++G+ S++S+ FHI I C N+++ +
Sbjct: 127 GQGTALWACKASHGESCPSGATTLGFSDSNNIVVSGLASLNSQMFHIVINDCQNVQMQGV 186
Query: 171 KITAHADS---------------------------------SKDILVSEVFCGPGQGISV 197
+++A +S + ++ + V CGPG GIS+
Sbjct: 187 RVSASGNSPNTDGIHVQMSSGVTILNSKIATGDDCVSIGPGTSNLWIEGVACGPGHGISI 246
Query: 198 GSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIV 257
GSLGK ++ V +TV+ TFT T NG+R+K+W G A N F+ M NVENPIV
Sbjct: 247 GSLGKEQEEAGVQNVTVKTVTFTGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIV 306
Query: 258 IDQLYCPYNK 267
IDQ YCP NK
Sbjct: 307 IDQHYCPDNK 316
>gi|89892727|gb|ABD79097.1| Zea m 13 allergen [Zea mays]
Length = 404
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 165/363 (45%), Gaps = 77/363 (21%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
++ GA +G TD +KA +W A G K T+L+P G +LV F GPCK ++
Sbjct: 35 FDITKLGASGNGKTDSTKAVQEAWASACGGTG-KQTILIPKGDFLVGPLNFTGPCKGDVT 93
Query: 87 FQLQGLL----------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQ- 129
Q+ G L ++ +D + KG GQG W N C K DC+
Sbjct: 94 IQVNGNLLATTDLSQYKDHGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKI 153
Query: 130 LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSSK--------- 180
LP + +F+N+ ++GI ++S++FH+N+ C ++ + D+ +TA DS
Sbjct: 154 LPNSLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDS 213
Query: 181 ------------------------DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRN 216
+ ++ V CGPG GIS+GSLG+ +++V + V++
Sbjct: 214 SGVTITNTVIGVGDDCISIGPGTFKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKD 273
Query: 217 CTFTCTSNGVRVKTWPD-SHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC------- 268
CT T+NGVR+K + D + + AS +E+I M + PI+ID YCP C
Sbjct: 274 CTLKKTANGVRIKAYEDAASVLTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASK 333
Query: 269 ---------NIKPKDSMP-------NIEIGNRNLVYNGVNVKVEGP--ETTSLCSNVKPT 310
NI S P + +I + + VN+K G +T ++C N K +
Sbjct: 334 VTVKDVTFKNIPGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGS 393
Query: 311 LFG 313
G
Sbjct: 394 AKG 396
>gi|157313320|gb|ABV32553.1| endopolygalacturonase [Prunus persica]
Length = 393
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 148/310 (47%), Gaps = 50/310 (16%)
Query: 7 FSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP 66
FSL + F+ + AT NV GA ADG TD +KAF ++W +A G + VP
Sbjct: 8 FSLSLIFVFVINSAVATPVTYNVASLGAKADGKTDSTKAFLSAWAKACASMN-PGVIYVP 66
Query: 67 PGKYLVSFAEFEGPCKA-SISFQLQGLLD---------------LFSIDTSLSLAKGTFH 110
G + + F GPCK +I+F++ G L F ++++ G
Sbjct: 67 AGTFFLRDVVFSGPCKNNAITFRIAGTLVAPSDYRVIGNAANWIFFHHVNGVTISGGILD 126
Query: 111 GQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
GQG W H S T + F+ N+ ++G+ S++S+ FHI I C N+++ +
Sbjct: 127 GQGTALWACKASHGESCPSGATTLGFSDSNNIVVSGLASLNSQMFHIVINDCQNVQMQGV 186
Query: 171 KITAHADS---------------------------------SKDILVSEVFCGPGQGISV 197
+++A +S + ++ + V CGPG GIS+
Sbjct: 187 RVSASGNSPNTDGIHVQMSSGVTILNSKIATGDDCVSIGPGTSNLWIEGVACGPGHGISI 246
Query: 198 GSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIV 257
GSLGK ++ V +TV+ TFT T NG+R+K+W G A N F+ M NVENPIV
Sbjct: 247 GSLGKEQEEAGVQNVTVKTVTFTGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIV 306
Query: 258 IDQLYCPYNK 267
IDQ YCP NK
Sbjct: 307 IDQHYCPDNK 316
>gi|89892729|gb|ABD79098.1| Zea m 13 allergen [Zea mays]
Length = 411
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 150/323 (46%), Gaps = 56/323 (17%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNR----VLNVKDFGAVADGITDDSKAFDTSWREAWNW 56
L L F ++ +GIDA ++ GA +G TD +KA +W A
Sbjct: 12 LFLLVLFCIVHGEKEESKGIDAKASGPGGFFDITKLGASGNGKTDSTKAVQEAWASACGG 71
Query: 57 DGIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLL----------------DLFSIDT 100
G K T+L+P G +LV F GPCK ++ Q+ G L ++ +D
Sbjct: 72 TG-KQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYKEHGNWIEILRVDN 130
Query: 101 SLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINI 159
+ KG GQG W N C K DC+ LP + +F+N+ ++GI ++S++FH+N+
Sbjct: 131 LVITGKGNLDGQGPAVWSKNFCTKKYDCKILPNSLVMDFVNNGEVSGITLLNSKFFHMNM 190
Query: 160 LGCYNLKLNDLKITAHADS---------------------------------SKDILVSE 186
C N+ + D+ +TA DS + + ++
Sbjct: 191 YQCKNMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNITG 250
Query: 187 VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPD-SHIGIASNFTFE 245
V CGPG GIS+GSLG+ +++V + V++CT T GVR+K + D + + S +E
Sbjct: 251 VTCGPGHGISIGSLGRYKDEKDVRDINVKDCTLKKTMFGVRIKAYEDAASVLTVSKIHYE 310
Query: 246 DIVMNNVENPIVIDQLYCPYNKC 268
+I M + NPI ID YCP C
Sbjct: 311 NIKMEDSANPIFIDMKYCPNKLC 333
>gi|399764460|gb|AFP50430.1| polygalacturonase 3, partial [Medicago laciniata]
Length = 236
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 114/213 (53%), Gaps = 40/213 (18%)
Query: 91 GLLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPT-PIRFNFLNDSTITGIKS 149
G +D F++ KG F G GET+W N C KNS C+ + FNFL S + I S
Sbjct: 26 GYVDYFTLS-----GKGVFDGNGETSWRQNDCGKNSKCKRRSMNFGFNFLKHSIVRDITS 80
Query: 150 VDSRYFHINILGCYNLKLNDLKITAHADS------------------------------- 178
DS+ FH+N+LGC N + ITA A S
Sbjct: 81 KDSKNFHVNVLGCTNFTFDGFTITAPAKSINTDGIHIGRSTDVKVLNTNIATGDDCVSLG 140
Query: 179 --SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDS-H 235
S+ I V V CGPG GISVGSLGK K+E V + V+NCTFT T NGVR+KTWP +
Sbjct: 141 QGSRQITVQNVNCGPGHGISVGSLGKYPKEEAVEHVLVKNCTFTNTDNGVRIKTWPSAPG 200
Query: 236 IGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
++ FEDI+M NV NP++IDQ YCP+N+C
Sbjct: 201 TSPITDMHFEDIIMVNVRNPVIIDQEYCPWNQC 233
>gi|91806395|gb|ABE65925.1| polygalacturonase/pectinase [Arabidopsis thaliana]
Length = 280
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 131/251 (52%), Gaps = 69/251 (27%)
Query: 134 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSS-------------- 179
IRF+F+ ++ I I S+D++ FHIN+LG N+ +++K+ A A+S
Sbjct: 21 IRFDFVENAEIRDISSIDAKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGRSEGVK 80
Query: 180 -------------------KDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFT 220
K++ V V CGPG GISVGSLG+ + +++V G+TV NCT
Sbjct: 81 ILNSKIATGDDCISVGDGMKNLHVENVMCGPGHGISVGSLGRYVHEQDVTGITVVNCTLQ 140
Query: 221 CTSNGVRVKTWPDSHIG-IASNFTFEDIVMNNVENPIVIDQLYCPYNKCN-IKP------ 272
T NG+R+KTWP + AS FE+I++NNV NPI+IDQ YCP+N+CN KP
Sbjct: 141 GTDNGLRIKTWPSAACATTASGIHFENIILNNVSNPILIDQEYCPWNQCNKQKPSTIKLV 200
Query: 273 -------------KDSM----------PNIEIGNRNLVYNGVNVKVEGPETTSLCSNVKP 309
KD++ N+EIGN NL Y G +GP T +CSNV P
Sbjct: 201 DISFKNIRGTSGNKDAVKLLCSKAHPCANVEIGNINLEYKG----ADGPPTF-MCSNVSP 255
Query: 310 TLFGKQIPATC 320
L G Q P C
Sbjct: 256 KLVGTQNPKAC 266
>gi|162464324|ref|NP_001105432.1| exopolygalacturonase precursor [Zea mays]
gi|129940|sp|P26216.1|PGLR1_MAIZE RecName: Full=Exopolygalacturonase; Short=ExoPG; AltName:
Full=Galacturan 1,4-alpha-galacturonidase; AltName:
Full=Pectinase; Flags: Precursor
gi|22417|emb|CAA40850.1| polygalacturonase [Zea mays]
gi|22419|emb|CAA44249.1| polygalacturonase [Zea mays]
gi|288374|emb|CAA46679.1| polygalacturonase [Zea mays]
gi|413916395|gb|AFW56327.1| exopolygalacturonase Precursor [Zea mays]
gi|413943670|gb|AFW76319.1| exopolygalacturonase Precursor [Zea mays]
gi|413943674|gb|AFW76323.1| polygalacturonase2 [Zea mays]
Length = 410
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 150/323 (46%), Gaps = 56/323 (17%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNR----VLNVKDFGAVADGITDDSKAFDTSWREAWNW 56
L L F ++ +GIDA ++ GA +G TD +KA +W A
Sbjct: 11 LFLLVLFCIVHGEKEESKGIDAKASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGG 70
Query: 57 DGIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLL----------------DLFSIDT 100
G K T+L+P G +LV F GPCK ++ Q+ G L ++ +D
Sbjct: 71 TG-KQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYKDHGNWIEILRVDN 129
Query: 101 SLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINI 159
+ KG GQG W N C K DC+ LP + +F+N+ ++G+ ++S++FH+N+
Sbjct: 130 LVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNM 189
Query: 160 LGCYNLKLNDLKITAHADS---------------------------------SKDILVSE 186
C ++ + D+ +TA DS + + ++
Sbjct: 190 YRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNITG 249
Query: 187 VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPD-SHIGIASNFTFE 245
V CGPG GIS+GSLG+ +++V + V++CT T GVR+K + D + + S +E
Sbjct: 250 VTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASVLTVSKIHYE 309
Query: 246 DIVMNNVENPIVIDQLYCPYNKC 268
+I M + NPI ID YCP C
Sbjct: 310 NIKMEDSANPIFIDMKYCPNKLC 332
>gi|225216943|gb|ACN85237.1| exopolygalacturonase precursor [Oryza minuta]
Length = 422
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 160/337 (47%), Gaps = 60/337 (17%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
++ GAV +G TD + A +W+ A G K T+++P G +L + GPC +++
Sbjct: 51 FDITKLGAVGNGRTDSTIAVMEAWKSACGGAG-KQTIVIPKGDFLTGALDLRGPCNGAVT 109
Query: 87 FQLQGLL------------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDC 128
QL G L + +D + KG GQG W N C KN +C
Sbjct: 110 VQLDGNLLGSNDLSKYAGKRMPNWIEFRKVDNLVISGKGKLDGQGPGVWSKNSCSKNYNC 169
Query: 129 QL-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--------- 178
+L P + N +N+ + GI +++++FH+NI C ++ + + ITA +S
Sbjct: 170 KLLPNTLVLNTVNNGLVAGITLLNAKFFHMNIYRCKDVTIRGVTITAPEESPNTDGIHIG 229
Query: 179 ------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTV 214
S I ++ V CGPG GIS+GSLG+ + +V+ +TV
Sbjct: 230 DSSKINIADTIIGTGDDCISIGPGSDKINITGVTCGPGHGISIGSLGRYKDERDVMDVTV 289
Query: 215 RNCTFTCTSNGVRVKTWPDSHIGIA-SNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPK 273
C T+NG+R+K++ D+ + S FE++VM+NV NPI+IDQ YCP + C
Sbjct: 290 NRCVLRKTTNGLRIKSYEDAVSPVTVSKVAFENVVMDNVANPIIIDQKYCPNSICT---- 345
Query: 274 DSMPNIEIGNRNLVYNGVNVKVEGPETTS-LCSNVKP 309
S + ++ +++ + + PE LCS+ P
Sbjct: 346 -SKGDSKVSVKDVTFKNITGTSATPEAVQLLCSDKLP 381
>gi|22422|emb|CAA40910.1| polygalacturonase [Zea mays]
Length = 406
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 150/323 (46%), Gaps = 56/323 (17%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNR----VLNVKDFGAVADGITDDSKAFDTSWREAWNW 56
L L F ++ +GIDA ++ GA +G TD +KA +W A
Sbjct: 7 LFLLVLFCIVHGEKEESKGIDAKASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGG 66
Query: 57 DGIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLL----------------DLFSIDT 100
G K T+L+P G +LV F GPCK ++ Q+ G L ++ +D
Sbjct: 67 TG-KQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYKDHGNWIEILRVDN 125
Query: 101 SLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINI 159
+ KG GQG W N C K DC+ LP + +F+N+ ++G+ ++S++FH+N+
Sbjct: 126 LVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNM 185
Query: 160 LGCYNLKLNDLKITAHADS---------------------------------SKDILVSE 186
C ++ + D+ +TA DS + + ++
Sbjct: 186 YRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNITG 245
Query: 187 VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPD-SHIGIASNFTFE 245
V CGPG GIS+GSLG+ +++V + V++CT T GVR+K + D + + S +E
Sbjct: 246 VTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASVLTVSKIHYE 305
Query: 246 DIVMNNVENPIVIDQLYCPYNKC 268
+I M + NPI ID YCP C
Sbjct: 306 NIKMEDSANPIFIDMKYCPNKLC 328
>gi|449463753|ref|XP_004149596.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
gi|449520775|ref|XP_004167408.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
Length = 349
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/358 (31%), Positives = 166/358 (46%), Gaps = 95/358 (26%)
Query: 45 AFDTSWREAWNWDGIKGTVLVPP-GKYLVSFAEFEGPCKASISFQLQGLLDLFSIDTSLS 103
A ++W A +G G VL+P GK+LV +GPC I QL G L L S D +
Sbjct: 6 ALSSAWSGACGNNG-GGVVLIPAQGKFLVLPLLLQGPCHGVIRIQLDGEL-LASSDKQFA 63
Query: 104 LAK----------------GTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGI 147
+ G G G +AWP N ++ P ++FN +N ++I I
Sbjct: 64 IGDHWLSIENVNNLFIDGLGRLTGSGASAWPSNSLNR------PISMKFNNVNTASIKNI 117
Query: 148 KSVDSRYFHINILGCYNLKLNDLKITAHADS----------------------------- 178
S DS++FH + ++ +++ + A A+S
Sbjct: 118 SSFDSKFFHFAVHASRDVTFDNVTVVAPANSPNTDGIHISTSSGINIMHSTIGTGDDCIS 177
Query: 179 ----SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDS 234
SK I +S V CGPG GIS+GSLGK +E+V +TVR+ TF TSNG R+K+W
Sbjct: 178 LGPGSKMINISNVHCGPGHGISIGSLGKNPNEEDVFDVTVRDSTFIGTSNGARIKSWSSP 237
Query: 235 HIGIASNFTFEDIVMNNVENPIVIDQLYCP-------YNKCNIKPKD------------- 274
+ + S TF ++ MNNV+NPI+IDQ YCP NK ++ KD
Sbjct: 238 YSSMVSKVTFLNLQMNNVKNPIIIDQSYCPDSCAPNKMNKSMVQIKDVRYQGITGSSNTP 297
Query: 275 ---------SMP--NIEIGNRNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 321
+P I + + NL +NG G +TTS+C NVK + G+Q+P +C+
Sbjct: 298 VAVDFECSQVLPCQGIVLQDINLTFNG------GGKTTSICHNVKGSASGQQLPPSCL 349
>gi|359494515|ref|XP_003634793.1| PREDICTED: LOW QUALITY PROTEIN: exopolygalacturonase-like [Vitis
vinifera]
Length = 246
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/245 (39%), Positives = 125/245 (51%), Gaps = 60/245 (24%)
Query: 134 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--------------- 178
+RFNF+ ++ + I S DS+ FHIN+LGC NL ++ I+A DS
Sbjct: 5 LRFNFITNNMVEDITSRDSKQFHINLLGCRNLTFYNVAISAPKDSLNTDGIHIGRSSGID 64
Query: 179 ------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFT 220
S I + + CG G GI VGSLGK +E +VG++V+NCTF
Sbjct: 65 ITDSAIETGDDCVSISDGSGQINIQRITCGLGHGICVGSLGKYPDEESMVGISVKNCTFI 124
Query: 221 CTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNIE 280
T NGVRVKTWP SH S EDIVMNNV NPI+IDQ YCP+N+CN+K S+ I+
Sbjct: 125 NTQNGVRVKTWPASHQDTTSEMHLEDIVMNNVGNPIIIDQKYCPHNQCNLK---SLSRIK 181
Query: 281 IGN---RNL---VYNGVNVKV----------------EGPE--TTSLCSNVKPTLFGKQI 316
+ N RN+ V VK+ G E S C N+KP L KQ+
Sbjct: 182 LSNVSFRNIQGTTSTQVAVKLVCSQGVPCQDVELGDNNGNEGLAMSQCKNIKPNLLDKQL 241
Query: 317 PATCV 321
P TC
Sbjct: 242 PRTCA 246
>gi|85680276|gb|ABC72324.1| endo-polygalacturonase [Prunus persica]
gi|110293963|gb|ABG66443.1| endo-polygalacturonase [Prunus persica]
Length = 393
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/310 (31%), Positives = 148/310 (47%), Gaps = 50/310 (16%)
Query: 7 FSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP 66
FSL + F+ + AT NV GA ADG TD +KAF ++W +A G + VP
Sbjct: 8 FSLSLIFVFMINSAIATPVTYNVASLGAKADGKTDSTKAFLSAWAKACASMN-PGVIYVP 66
Query: 67 PGKYLVSFAEFEGPCKA-SISFQLQGLLD---------------LFSIDTSLSLAKGTFH 110
G + + F GPCK +I+F++ G L F ++++ G
Sbjct: 67 AGTFFLRDVVFSGPCKNNAITFRIAGTLVAPSDYRVIGNAANWIFFHHVNGVTISGGILD 126
Query: 111 GQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
GQG W H S T + F+ N+ ++G+ S++S+ FHI I C N+++ +
Sbjct: 127 GQGTALWACKASHGESCPSGATTLGFSDSNNIVVSGLASLNSQMFHIVINDCQNVQMQGV 186
Query: 171 KITAHADS---------------------------------SKDILVSEVFCGPGQGISV 197
+++A +S + ++ + V CGPG GIS+
Sbjct: 187 RVSASGNSPNTDGIHVQMSSGVTILNSKIATGDDCVSIGPGTSNLWIEGVACGPGHGISI 246
Query: 198 GSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIV 257
GSLGK ++ V +TV+ TF+ T NG+R+K+W G A N F+ M NVENPIV
Sbjct: 247 GSLGKEQEEAGVQNVTVKTVTFSGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIV 306
Query: 258 IDQLYCPYNK 267
IDQ YCP NK
Sbjct: 307 IDQHYCPDNK 316
>gi|218198536|gb|EEC80963.1| hypothetical protein OsI_23684 [Oryza sativa Indica Group]
Length = 416
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 153/313 (48%), Gaps = 54/313 (17%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
++ GAV +G D + A +WR A G K T+L+P G ++ E GPC +++
Sbjct: 45 FDITKLGAVGNGRADSTGAVMAAWRSACAGAG-KQTILIPKGDFMTGAMELRGPCNGAVT 103
Query: 87 FQLQGLL------------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDC 128
QL G L ++ +D + KG GQG W N C KN +C
Sbjct: 104 IQLDGNLLGSNDLSKYPGKKMPNWVEVRHVDNFVISGKGKLDGQGPGVWSKNSCAKNYNC 163
Query: 129 QL-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--------- 178
+L P + N +N+ ++GI +++++FH+NI C ++K++ + I A DS
Sbjct: 164 KLLPNTLVLNTVNNGVVSGITLLNAKFFHMNIYRCKDIKISGVTINAPGDSPNTDGIHMG 223
Query: 179 ------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTV 214
+ + ++ V CGPG GIS+GSLG+ + +V ++V
Sbjct: 224 DSSKITIAATTIGTGDDCISIGPGTDGVNITGVTCGPGHGISIGSLGRYKDERDVRDVSV 283
Query: 215 RNCTFTCTSNGVRVKTWPDSHIGIA-SNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPK 273
C T+NG+R+K++ DS + S +++ +VM++V+NPI+IDQ YCP + C K
Sbjct: 284 TRCVLRKTTNGLRIKSYEDSVSPVTVSKVSYDGVVMDHVDNPIIIDQKYCPNSICTSKGD 343
Query: 274 DSMPNIEIGNRNL 286
+ ++ RN+
Sbjct: 344 SKVSVRDVTFRNI 356
>gi|85680278|gb|ABC72325.1| endo-polygalacturonase [Prunus persica]
gi|110293961|gb|ABG66442.1| endo-polygalactoronase [Prunus persica]
gi|337730171|gb|AEI70576.1| endo-polygalacturonase [Prunus persica]
Length = 393
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 147/310 (47%), Gaps = 50/310 (16%)
Query: 7 FSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP 66
FSL + F+ + AT NV GA ADG TD +KAF +W +A G + VP
Sbjct: 8 FSLSLIFVFMINSAIATPVTYNVASLGAKADGKTDSTKAFLFAWAKACASMN-PGVIYVP 66
Query: 67 PGKYLVSFAEFEGPCKA-SISFQLQGLLD---------------LFSIDTSLSLAKGTFH 110
G + + F GPCK +I+F++ G L F ++++ G
Sbjct: 67 AGTFFLRDVVFSGPCKNNAITFRIAGTLVAPSDYRVIGNAANWIFFHHVNGVTISGGILD 126
Query: 111 GQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
GQG W H S T + F+ N+ ++G+ S++S+ FHI I C N+++ +
Sbjct: 127 GQGTALWACKASHGESCPSGATTLGFSDSNNIVVSGLASLNSQMFHIVINDCQNVQMQGV 186
Query: 171 KITAHADS---------------------------------SKDILVSEVFCGPGQGISV 197
+++A +S + ++ + V CGPG GIS+
Sbjct: 187 RVSASGNSPNTDGIHVQMSSGVTILNSKIATGDDCVSIGPGTSNLWIEGVACGPGHGISI 246
Query: 198 GSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIV 257
GSLGK ++ V +TV+ TFT T NG+R+K+W G A N F+ M NVENPIV
Sbjct: 247 GSLGKEQEEAGVQNVTVKTVTFTGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIV 306
Query: 258 IDQLYCPYNK 267
IDQ YCP NK
Sbjct: 307 IDQHYCPDNK 316
>gi|449436769|ref|XP_004136165.1| PREDICTED: exopolygalacturonase clone GBGE184-like [Cucumis
sativus]
Length = 400
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 117/339 (34%), Positives = 158/339 (46%), Gaps = 65/339 (19%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKA-S 84
V +V GA DG TDD+ AF T+W A L+P G +LV F GPCK+
Sbjct: 83 VFDVTKHGAKGDGETDDAHAFMTTWIAACRNTVGPTKFLIPQGTFLVGPVTFAGPCKSFP 142
Query: 85 ISFQLQGLL------------DLFSID--TSLSL-AKGTFHGQGETAWPLNQCHKNSDCQ 129
I+ + QG + + FSI+ T L G F GQG + WP N C KN+ CQ
Sbjct: 143 ITLENQGTVKATTDISAYSSPEWFSIEDITGFILTGSGVFDGQGLSVWPYNDCKKNNLCQ 202
Query: 130 -LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSSKDILVSEVF 188
LP I+F LN + + G+ S++S FH ++ CYN ++KI A +SS
Sbjct: 203 PLPISIKFTRLNHTIVDGLTSINSMGFHTSVFYCYNFTATNMKIIAPHNSSNT------- 255
Query: 189 CGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIV 248
G IS +L + V+NCT +NG R+KTW G+AS FEDIV
Sbjct: 256 --NGMHISTSTL-----------VXVKNCTIFNATNGARIKTWASPVSGLASRIIFEDIV 302
Query: 249 MNNVENPIVIDQLYCPYNK-------CNIKPKD----SMPN---------------IEIG 282
M NV+NPI+IDQ Y K N++ K+ S N +E+
Sbjct: 303 MYNVKNPIIIDQTYGTKKKKESNWKVSNVQFKNIRGTSTTNVAVLLECSKLFPCEGVELR 362
Query: 283 NRNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 321
+ NL Y G N++ S CSN K FG + P CV
Sbjct: 363 DINLSYGGTNLR--NTTIVSSCSNAKIATFGVKNPPPCV 399
>gi|15224383|ref|NP_181917.1| putative polygalacturonase /pectinase [Arabidopsis thaliana]
gi|3212847|gb|AAC23398.1| putative polygalacturonase [Arabidopsis thaliana]
gi|67633606|gb|AAY78727.1| putative polygalacturonase/pectinase [Arabidopsis thaliana]
gi|330255247|gb|AEC10341.1| putative polygalacturonase /pectinase [Arabidopsis thaliana]
Length = 392
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 174/392 (44%), Gaps = 77/392 (19%)
Query: 2 LLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKG 61
L+A SF+ A+N NV FGA DG TD +KAF +W+ A
Sbjct: 6 LVAVLLMFFSSFLLMKSSTAASN--YNVVSFGAKPDGRTDSTKAFLGAWQAACR-SAAAV 62
Query: 62 TVLVPPGKYLVSFAEFEGPCKASISFQLQGLLD---------------LFSIDTSLSLAK 106
TV VP G +L+ EF GPC++ I+FQ+ G + LF +S+
Sbjct: 63 TVTVPRGSFLLKPVEFRGPCRSRITFQIYGTIVAPSDYRGLGNSGYWILFVKVNRISIIG 122
Query: 107 GTFHGQGETAWPLNQCHKNSDCQL-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNL 165
GT +G + W + K+ C + + FN+ ND ++G+ S++S+ H+ I C N+
Sbjct: 123 GTLDARGASFWACRKSGKS--CPVGARSMTFNWANDVVVSGLTSINSQTTHLVINSCNNV 180
Query: 166 KLNDLKITA----------HADSS-----------------------KDILVSEVFCGPG 192
+ +K+ A H S +++ +S++ CGPG
Sbjct: 181 IVRKVKLVAPDQSPNTDGLHVQGSAGVTVTDGTFHTGDDCISIGPGTRNLYMSKLNCGPG 240
Query: 193 QGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNV 252
GIS+GSLG+ + V +T+ N F+ + NGVR+KTW G N F++++M NV
Sbjct: 241 HGISIGSLGRDANEAGVENITLINSVFSGSDNGVRIKTWARQSTGFVRNVLFQNLIMKNV 300
Query: 253 ENPIVIDQLYCPYNKCNIKPKDSMPNIEIGNRNLV-----------------------YN 289
+NPI++DQ YCP N+ K + ++ RN+ +
Sbjct: 301 QNPIIVDQNYCPSNQGCPKQGSGVKISQVVYRNIQGTSRTQQALTFDCSRSNPCQAIRLH 360
Query: 290 GVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 321
+ + G TS C N+K G +P C+
Sbjct: 361 DIKLTFNGRSATSTCKNIKGVKAGVVMPQGCL 392
>gi|297848848|ref|XP_002892305.1| hypothetical protein ARALYDRAFT_887756 [Arabidopsis lyrata subsp.
lyrata]
gi|297338147|gb|EFH68564.1| hypothetical protein ARALYDRAFT_887756 [Arabidopsis lyrata subsp.
lyrata]
Length = 394
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 50/309 (16%)
Query: 4 AARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTV 63
A F L+ + +T + + + V NV FGA DG+TD + AF +W+ A TV
Sbjct: 5 AITFPLIFTLLTFIDVSSSASIVFNVVSFGAKPDGVTDSTAAFLKAWQGACGSVS-SATV 63
Query: 64 LVPPGKYLVSFAEFEGPCKASISFQLQGLLD---------------LFSIDTSLSLAKGT 108
+VP G +L+ F GPCK+ I+FQ+ G + LF+ SL GT
Sbjct: 64 VVPTGTFLLKVITFGGPCKSKITFQVAGTIVAPEDYRTFGNSGYWILFNKVNRFSLVGGT 123
Query: 109 FHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLN 168
F + W + +N + + I FN D I+G+KS++S+ H+ + GC N+ +
Sbjct: 124 FDARANGFWSCRKSGQNCPPGVRS-ISFNSAKDVIISGVKSMNSQVSHMTLNGCTNVVVR 182
Query: 169 DLKITAHADS---------------------------------SKDILVSEVFCGPGQGI 195
++++ A DS +++ L+S++ CGPG G+
Sbjct: 183 NVRLVAPGDSPNTDGFTVQFSTGVTFTGSTVQTGDDCVAIGQGTRNFLISKLACGPGHGV 242
Query: 196 SVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENP 255
S+GSL K + ++ V +TV + FT T NGVR+K+W G N F++++M NV+NP
Sbjct: 243 SIGSLAKQLNEDGVENVTVSSSVFTGTQNGVRIKSWARPSTGFVRNVFFQNLIMKNVQNP 302
Query: 256 IVIDQLYCP 264
I+IDQ YCP
Sbjct: 303 IIIDQNYCP 311
>gi|449534450|ref|XP_004174175.1| PREDICTED: exopolygalacturonase-like, partial [Cucumis sativus]
Length = 261
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 130/251 (51%), Gaps = 69/251 (27%)
Query: 134 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH------------------ 175
++F+F+ +S + I S+DS+ FHIN+LGC N+ + I+A
Sbjct: 4 LKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQIN 63
Query: 176 ---------------ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFT 220
DS+K + ++ V CGPG GISVGSLGK K+++VVG+TV+ C
Sbjct: 64 ILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKEKDVVGVTVKACKLI 123
Query: 221 CTSNGVRVKTWPDSHIG-IASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK-------P 272
T+NGVR+KTWPDS IAS+ FEDI M NV NP++IDQ YCP+N+CN K
Sbjct: 124 NTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQEYCPWNQCNRKVPSKIKIS 183
Query: 273 KDSMPNI-----------------------EIGNRNLVYNGVNVKVEGPETTSLCSNVKP 309
K S NI E+ + NL Y+G + GP S C+NV+P
Sbjct: 184 KVSFKNIRGTSATPIAVKLVCSKSIPCEGVEVADINLTYSG----IRGP-ILSECANVQP 238
Query: 310 TLFGKQIPATC 320
+ GKQ P C
Sbjct: 239 LITGKQSPQIC 249
>gi|426204242|gb|AFY12677.1| polygalacturonase 11c, partial [Medicago littoralis]
Length = 240
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/218 (40%), Positives = 116/218 (53%), Gaps = 39/218 (17%)
Query: 93 LDLFSIDTSLSLAKGTFHGQGETAWPLNQ-----CHKNSDCQLPTPIRFNFLNDSTITGI 147
+ ID KG F GQG TA+ Q K S+ ++ + F F+N+S +TG+
Sbjct: 23 VKFLYIDHLTLSGKGVFDGQGATAYKQAQPAAAWSGKKSNVKILMNLGFMFVNNSMVTGV 82
Query: 148 KSVDSRYFHINILGCYNLKLNDLKITAHA------------------------------- 176
S DS+ FH+ +LGC N+ + +TA A
Sbjct: 83 TSKDSKNFHVMVLGCNNITFDGFTVTAPAESPNTDGIHMGRSTDVKILNTNIGTGDDCVS 142
Query: 177 --DSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDS 234
D S+ I V V CGPG GISVGSLG+ ++ V G+TV+NCT T T NGVR+KTWPD+
Sbjct: 143 LGDGSRKITVQGVKCGPGHGISVGSLGRYTTEDNVEGVTVKNCTLTSTQNGVRIKTWPDA 202
Query: 235 HIGIA-SNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK 271
I S+ FEDI MNNV NPI+IDQ YCP+N CN K
Sbjct: 203 PGTITVSDIHFEDITMNNVMNPIIIDQEYCPWNACNKK 240
>gi|121488655|emb|CAI64503.1| endopolygalacturonase [Prunus domestica subsp. insititia]
Length = 382
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 144/304 (47%), Gaps = 50/304 (16%)
Query: 13 FITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLV 72
F+ + AT NV GA ADG+TD +KAF ++W +A G + VP G + +
Sbjct: 3 FVFMINSAIATPVTYNVASLGAKADGMTDSTKAFLSAWAKACASMN-PGVIYVPAGTFFL 61
Query: 73 SFAEFEGPCKA-SISFQLQGLLD---------------LFSIDTSLSLAKGTFHGQGETA 116
F GPCK +I+F++ G L F ++++ G GQG
Sbjct: 62 REVVFSGPCKNNAITFRIAGTLVAPSDYRVIGNAVNWIFFHHVNGVTISGGILDGQGTAL 121
Query: 117 WPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 176
W H S T + F+ N+ ++G+ S++S+ FHI I C N+++ + ++A
Sbjct: 122 WACKASHGESCPSGATTLSFSDSNNIVVSGLASLNSQMFHIVINDCQNVQMQGVGVSASG 181
Query: 177 DS---------------------------------SKDILVSEVFCGPGQGISVGSLGKG 203
+S + ++ + V CGPG GIS+GSLGK
Sbjct: 182 NSPNTEGIHVQMSSGVTILNSKIATGGDCVSIGPGTSNLWIESVACGPGHGISIGSLGKE 241
Query: 204 IKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
++ V +TV+ TFT T NG+R+K+W G A N F+ M NVENPI+IDQ YC
Sbjct: 242 QEEAGVQNVTVKTVTFTGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIIIDQHYC 301
Query: 264 PYNK 267
P NK
Sbjct: 302 PDNK 305
>gi|380469906|gb|AFD62267.1| endopolygalacturonase [Prunus armeniaca]
Length = 393
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 147/310 (47%), Gaps = 50/310 (16%)
Query: 7 FSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP 66
FSL + F+ + AT NV GA ADG TD +KAF ++W +A + VP
Sbjct: 8 FSLSLIFVFMINSAIATPVTYNVASLGAKADGKTDSTKAFLSAWAKACASMN-PSVIYVP 66
Query: 67 PGKYLVSFAEFEGPCKA-SISFQLQGLLD---------------LFSIDTSLSLAKGTFH 110
G + + F GPCK+ +I+F++ G L F ++++ G
Sbjct: 67 AGTFFLRDVVFSGPCKSNAITFRIAGTLVAPSDYRVIGNAANWIFFHHVNGVTISGGILD 126
Query: 111 GQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
GQG W H S T + F+ N+ ++G+ S++S+ FHI I C N+++ +
Sbjct: 127 GQGTALWACKASHGESCPSGATTLSFSDSNNIVVSGLASLNSQMFHIVINDCQNVQMQGV 186
Query: 171 KITAHADS---------------------------------SKDILVSEVFCGPGQGISV 197
+++ +S + ++ + V CGPG GIS+
Sbjct: 187 RVSRSGNSPNTDGIHVQMSSGVTILNSKIATGDDCISIGPGTSNLWIESVACGPGHGISI 246
Query: 198 GSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIV 257
GSLGK ++ V +TV+ TFT T NG+R+K+W G A N F+ M NVENPI+
Sbjct: 247 GSLGKEQEEAGVQNVTVKTVTFTGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPII 306
Query: 258 IDQLYCPYNK 267
IDQ YCP NK
Sbjct: 307 IDQHYCPDNK 316
>gi|357124301|ref|XP_003563839.1| PREDICTED: exopolygalacturonase-like [Brachypodium distachyon]
Length = 427
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 154/324 (47%), Gaps = 56/324 (17%)
Query: 36 ADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLL-- 93
DG D ++A + +W A G K T+ +P G YL F GPC ++ QL G L
Sbjct: 69 GDGKADCTEALEEAWASACKGTG-KQTIQIPKGDYLTGPLNFTGPCTGDVTIQLDGNLLG 127
Query: 94 ------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLN 140
++ ++ + KGT GQG W N C K DC+ LP + +F+
Sbjct: 128 STDMALYKSNWIEIMRVENLVISGKGTLDGQGPKVWSKNACAKKYDCKILPNSLVLDFIT 187
Query: 141 DSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---------------------- 178
+ TI+GI +++++FH+N+ C + + D+ +TA DS
Sbjct: 188 NGTISGITLLNAKFFHMNVFQCKGVTIEDVTVTAPGDSPNTDGIHIGDSSGITITGTTIG 247
Query: 179 -----------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVR 227
S I ++ V CGPG GIS+GSLG+ +++V + V++CT +NG+R
Sbjct: 248 VGDDCISIGPGSTKINITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKATNGLR 307
Query: 228 VKTWPDSHIGI-ASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNIEIGNRNL 286
+K++ + + AS +E++ M +V NPI+ID YCP C P ++ I +++
Sbjct: 308 IKSYQSAESSLTASEIHYENVNMEDVANPIIIDMNYCPNKIC---PAKGSSHVTI--KDV 362
Query: 287 VYNGVNVKVEGPETTS-LCSNVKP 309
+ + PE S LCS+ P
Sbjct: 363 TFKNITGTSSTPEAVSLLCSDKLP 386
>gi|224110354|ref|XP_002315493.1| predicted protein [Populus trichocarpa]
gi|222864533|gb|EEF01664.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 161/363 (44%), Gaps = 81/363 (22%)
Query: 32 FGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPC--KASISFQL 89
+GA G D + +F +WR A N+ G +L+P G +L+ F+GPC I Q+
Sbjct: 19 YGAKPGGKQDSALSFIRAWRAACNYRGT-ARLLIPMGTFLIGATIFQGPCLGPVPIKVQI 77
Query: 90 QGLLD--------------LF-SIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPTPI 134
G L LF +I+ L GT GQG W N + + P+ I
Sbjct: 78 AGTLKAVPDPSMYEEDFWILFENINGLLVTGTGTVDGQGNAVWKYN----DGGSRFPSSI 133
Query: 135 RFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---------------- 178
+FN + + I I SV+ FHI+I+ N++ L ITA A S
Sbjct: 134 KFNHVANGIIRQITSVNPMGFHISIVLSQNIRAKHLHITAPATSPNTDGIHISQSSVVKV 193
Query: 179 -----------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTC 221
S D+ V +V CGPG G SVGSLGK +++V G+ V NCT
Sbjct: 194 SRSVISTGDDCVAIIQGSTDVSVKKVTCGPGHGFSVGSLGKYPDEKDVRGVVVTNCTLRN 253
Query: 222 TSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNIEI 281
NGVR+KTW S ASN F+DI+M+NV+ PI+IDQ Y +K N + + ++
Sbjct: 254 ADNGVRIKTWGGSPPSQASNILFQDIIMDNVKRPIIIDQTYG--SKSNSPSRVKISDVRY 311
Query: 282 GN---------------------RNLVYNGVNVKVEGPET---TSLCSNVKPTLFGKQIP 317
N L ++ +N+K GP+ TS C+N K G Q P
Sbjct: 312 INIRGTSASEVGVDLKCSEAVPCEKLYFSNINLKYYGPKKLPFTSTCTNAKVNYVGNQFP 371
Query: 318 ATC 320
C
Sbjct: 372 PPC 374
>gi|426204244|gb|AFY12678.1| polygalacturonase 11c, partial [Medicago littoralis]
Length = 240
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 90/218 (41%), Positives = 116/218 (53%), Gaps = 39/218 (17%)
Query: 93 LDLFSIDTSLSLAKGTFHGQGETAWPLNQ-----CHKNSDCQLPTPIRFNFLNDSTITGI 147
+ ID KG F GQG TA+ Q K + ++ + F F+N+S ITG+
Sbjct: 23 VKFLYIDHLTLSGKGVFDGQGATAYKQAQPAAAWSGKKGNVKILMNLGFMFVNNSMITGV 82
Query: 148 KSVDSRYFHINILGCYNLKLNDLKITAHADS----------------------------- 178
S DS+ FH+ +LGC N+ + +TA ADS
Sbjct: 83 TSKDSKNFHVMVLGCNNITFDGFTVTAPADSPNTDGIHMGRSTDVKILNTNIGTGDDCVS 142
Query: 179 ----SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDS 234
S+ I V V CGPG GISVGSLG+ ++ V G+TV+NCT T T NGVR+KTWPD+
Sbjct: 143 LGDGSRKITVQGVKCGPGHGISVGSLGRYTTEDNVEGVTVKNCTLTSTQNGVRIKTWPDA 202
Query: 235 HIGIA-SNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK 271
I S+ FEDI MNNV NPI+IDQ YCP+N CN K
Sbjct: 203 PGTITVSDIHFEDITMNNVLNPIIIDQEYCPWNACNKK 240
>gi|426204246|gb|AFY12679.1| polygalacturonase 11c, partial [Medicago tornata]
Length = 240
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 87/206 (42%), Positives = 113/206 (54%), Gaps = 39/206 (18%)
Query: 105 AKGTFHGQGETAWPLNQ-----CHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINI 159
KG F GQG TA+ Q K + ++ + F F+N+S +TG+ S DS+ FH+ +
Sbjct: 35 GKGVFDGQGATAYKQAQPAAAWSGKKGNVKILMNLGFMFVNNSMVTGVTSKDSKNFHVMV 94
Query: 160 LGCYNLKLNDLKITAHADS---------------------------------SKDILVSE 186
LGC N+ + +TA ADS S+ I V
Sbjct: 95 LGCNNITFDGFTVTAPADSPNTDGIHMGRSTDVKILNTNIGTGDDCVSLGDGSRKITVQG 154
Query: 187 VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIA-SNFTFE 245
V CGPG GISVGSLG+ ++ V G+TV+NCT T T NGVR+KTWPD+ I S+ FE
Sbjct: 155 VKCGPGHGISVGSLGRYTTEDNVEGVTVKNCTLTATQNGVRIKTWPDAPGTITVSDIHFE 214
Query: 246 DIVMNNVENPIVIDQLYCPYNKCNIK 271
DI MNNV NPI+IDQ YCP+N CN K
Sbjct: 215 DITMNNVLNPIIIDQEYCPWNACNKK 240
>gi|356532547|ref|XP_003534833.1| PREDICTED: exopolygalacturonase clone GBGE184-like [Glycine max]
Length = 351
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 176/361 (48%), Gaps = 100/361 (27%)
Query: 49 SWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPC--KASISFQLQGL-------------- 92
+WR A + ++ +L+P G+++VS F GPC I+ Q+ G
Sbjct: 3 AWRAACKSN-VQARLLIPKGRFVVSTMFFAGPCLTPGPITIQVVGTVAATTDISEYANGE 61
Query: 93 -LDLFSIDTSLSLAKGTFHGQGETAWPL---------NQCHKNSDCQLPTPIRFNFLNDS 142
L +D + GTF G G+ +W N C +N P+ I F+ + +
Sbjct: 62 WLMFEELDGIKLIGGGTFDGMGKGSWATAENCEADESNNCVRN-----PSSIYFHNVRNG 116
Query: 143 TITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----------------SKDIL--- 183
I IKSVD + FH+ + C N++L LK+TA A S SK+I+
Sbjct: 117 IIQNIKSVDPKGFHLFVTSCANIRLRLLKLTAPATSPNTDGIHISNSIDVKLSKNIIETG 176
Query: 184 --------------VSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVK 229
++++ CGPG GIS+GSLGK +++EV + V+NCT T+NG+R+K
Sbjct: 177 DDCVSMIQGVNNVTINKLKCGPGHGISIGSLGKYPEEQEVKDIRVKNCTMVGTTNGLRIK 236
Query: 230 TWPDSHIGIASNFTFEDIVMNNVENPIVIDQLY-CPYNKCNIKPKDSMPNIEIGNRNLVY 288
TWPD + G AS+ TF DIVM+ V+NPI+IDQ Y C C KP S+ NI +++V+
Sbjct: 237 TWPDKYPGAASDITFGDIVMDKVKNPIIIDQEYECEPANCKKKP--SLVNI----KDVVF 290
Query: 289 NGV---------------------NVKVE------GPETT-SLCSNVKPTLFGKQIPATC 320
+ + ++K++ GP+ + S C+N+KP G Q PA C
Sbjct: 291 SNIRGTTISPIAVDLRCSKQFPCQDIKLQNIDLNLGPKPSGSRCANIKPIYTGVQRPAAC 350
Query: 321 V 321
+
Sbjct: 351 L 351
>gi|399764456|gb|AFP50428.1| polygalacturonase 3, partial [Medicago rigiduloides]
Length = 236
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 114/213 (53%), Gaps = 40/213 (18%)
Query: 91 GLLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPT-PIRFNFLNDSTITGIKS 149
G +D F++ KG F G GETAW N C KNS C+ + F+FL S + I S
Sbjct: 26 GYVDYFTLS-----GKGVFDGNGETAWRQNDCGKNSTCKRRSMNFGFSFLKHSIVQDITS 80
Query: 150 VDSRYFHINILGCYNLKLNDLKITAHADS------------------------------- 178
DS+ FH+N+LGC N + ITA A S
Sbjct: 81 KDSKNFHVNVLGCTNFTFDGFTITAPATSINTDGIHIGRSTDVKVLNTNIATGDDCISLG 140
Query: 179 --SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDS-H 235
S+ I V V CGPG GISVGSLGK K+E + + V+NCT + T NGVR+KTWP S
Sbjct: 141 QGSRQITVQNVNCGPGHGISVGSLGKNPKEEAIEHVLVKNCTISNTDNGVRIKTWPSSPG 200
Query: 236 IGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
++ FEDI+M NV+NP++IDQ YCP+N+C
Sbjct: 201 TSPITDMHFEDIIMVNVQNPVIIDQEYCPWNQC 233
>gi|255576400|ref|XP_002529092.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223531443|gb|EEF33276.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 394
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/308 (32%), Positives = 149/308 (48%), Gaps = 52/308 (16%)
Query: 7 FSLLVSF-ITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLV 65
F LL+ F I+S + ++ NV+++GA DG TD +KAF +W +A + T+ V
Sbjct: 9 FLLLIVFAISSSPAMSGPAQLYNVQNYGAKPDGSTDSTKAFLAAWADACGSNA-PATLYV 67
Query: 66 PPGKYLVSFAEFEGPCK-ASISFQLQGLLD---------------LFSIDTSLSLAKGTF 109
P G++ + EF+GPCK ++I + G L +F ++++ G
Sbjct: 68 PAGRFSLGKVEFQGPCKNSAIEVSIDGTLMAPSDYSVIGDENNWIIFVHVDGVTVSGGVL 127
Query: 110 HGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLND 169
G+G W KN T + F+ + I G+ S DS+ FHI I C N+K+
Sbjct: 128 DGRGSGLWSCKSSGKNCPTGA-TSLEFSNSKNIEINGLASEDSQKFHIVINSCQNVKVQS 186
Query: 170 LKITAHADS---------------------------------SKDILVSEVFCGPGQGIS 196
+K++A DS + ++ V V CGPG GIS
Sbjct: 187 VKVSADGDSPNTDGIHVEGSSSVTILNSKIGTGDDCVSIGPGTTNLWVENVACGPGHGIS 246
Query: 197 VGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPI 256
+GSLGK + V +TV+ TF+ T NGVR+K+W G A N F+ VM NV+NPI
Sbjct: 247 IGSLGKDNDEAGVQNVTVKTTTFSGTQNGVRIKSWGRPSSGFAKNILFQHAVMTNVQNPI 306
Query: 257 VIDQLYCP 264
VIDQ YCP
Sbjct: 307 VIDQNYCP 314
>gi|2605891|gb|AAC28947.1| polygalacturonase [Solanum lycopersicum]
Length = 395
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/316 (34%), Positives = 153/316 (48%), Gaps = 57/316 (18%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK 60
+LL + FS+ F S+ + LNV +FGA +D TD S AF ++W A N
Sbjct: 10 ILLISFFSIF--FTKSIADV----MFLNVINFGAKSDNKTDSSYAFLSAWDLACN-SSKS 62
Query: 61 GTVLVPPGKYLVSFAEFEGPCKAS-ISFQLQGLL---------------DLFSIDTSLSL 104
T+ VP G +LV A F+G C + I F++ G + LF +S+
Sbjct: 63 STIYVPKGIFLVKQAYFKGKCNNNPIIFRIDGSIVAPFDYNVIGNEKNWILFQGVDGVSI 122
Query: 105 AKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYN 164
G GQG + W KN + T + F+ N+ +ITG+ S++S+ FHI I GC N
Sbjct: 123 VGGNLDGQGSSLWTCKSSTKNCP-RGATTLGFSNSNNVSITGLTSLNSQMFHIVINGCKN 181
Query: 165 LKLNDLKITA----------HADSSKDI-----------------------LVSEVFCGP 191
+KL +K+ A H S DI + V CGP
Sbjct: 182 VKLQGVKVYAPGESPNTDGIHVQLSSDISILNSIISTGDDCVSIGPGTSNLWIQNVACGP 241
Query: 192 GQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNN 251
G GIS+GSL K ++ V +TV++ F T NGVR+KTW G +N F+ + M +
Sbjct: 242 GHGISIGSLAKDFEEAGVQNVTVKSVMFMNTQNGVRIKTWGRPSTGFVNNVLFQHVAMID 301
Query: 252 VENPIVIDQLYCPYNK 267
VENPIVIDQ YCPYNK
Sbjct: 302 VENPIVIDQNYCPYNK 317
>gi|449442581|ref|XP_004139060.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
gi|449526375|ref|XP_004170189.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 386
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 146/298 (48%), Gaps = 57/298 (19%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPC 81
A+ NV DFGA + TD S+AF+ +W A ++ VP G++ V+ FEGPC
Sbjct: 17 ASASTFNVVDFGAKPNVQTDSSQAFEAAWASACRAR-TAVSIYVPKGRFYVASLAFEGPC 75
Query: 82 KAS-ISFQLQGLL---------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKN 125
+ I+ ++ G L F ++L G QG W KN
Sbjct: 76 NNNDITIRIDGTLLAPSNYGVIANSGNWITFRRVDGVTLFGGVLDAQGSGLWAC----KN 131
Query: 126 SDCQLP---TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---- 178
S P T + F+ + ++G+ S++S+ FHI I GC N+K LK++A +S
Sbjct: 132 SKSSCPPGATSLEFSNSKNIMVSGLTSLNSQMFHIVINGCQNVKAQGLKVSAAGNSPNTD 191
Query: 179 -----------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEV 209
+ ++ + V CGPG GIS+GSLG+ ++++ V
Sbjct: 192 GIHVALSSTVTILNSIIGTGDDCISIGPGTSNLWIENVACGPGHGISIGSLGREVQEDGV 251
Query: 210 VGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
+TV++ TFT T NGVR+KTW G A + F+DIVM NVENPI+IDQ YCP NK
Sbjct: 252 ENVTVKSATFTNTQNGVRIKTWGKPSNGFARSVIFQDIVMVNVENPIIIDQNYCPDNK 309
>gi|399764458|gb|AFP50429.1| polygalacturonase 3, partial [Medicago rigidula]
Length = 236
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 113/213 (53%), Gaps = 40/213 (18%)
Query: 91 GLLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPT-PIRFNFLNDSTITGIKS 149
G +D F++ KG F G GETAW N C KNS C+ + FNFL S + I S
Sbjct: 26 GYVDYFTLS-----GKGVFDGNGETAWRQNDCGKNSTCKRRSMNFGFNFLKHSIVQDITS 80
Query: 150 VDSRYFHINILGCYNLKLNDLKITAHADS------------------------------- 178
DS+ FH+N+LGC N + ITA A S
Sbjct: 81 KDSKNFHVNVLGCTNFTFDGFTITAPATSINTDGIHIGRSTDVKVLNTNIATGDDCISLG 140
Query: 179 --SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDS-H 235
S+ I V V CGPG GISVGSLGK K+E + + V+NCT + T NGVR+KTWP S
Sbjct: 141 QGSRQITVQNVNCGPGHGISVGSLGKNPKEEAIEHVLVKNCTISNTDNGVRIKTWPSSPG 200
Query: 236 IGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
++ FEDI+M NV+NP++IDQ YCP+ +C
Sbjct: 201 TSPITDMHFEDIIMVNVQNPVIIDQEYCPWXQC 233
>gi|399764466|gb|AFP50433.1| polygalacturonase 3, partial [Medicago sauvagei]
Length = 236
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 113/213 (53%), Gaps = 40/213 (18%)
Query: 91 GLLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPT-PIRFNFLNDSTITGIKS 149
G +D F++ KG F G GET+W N C KNS C+ + FNFL S + I S
Sbjct: 26 GYVDYFTLS-----GKGIFDGNGETSWRQNDCGKNSKCKRRSMNFGFNFLKHSIVRDITS 80
Query: 150 VDSRYFHINILGCYNLKLNDLKITAHADS------------------------------- 178
DS+ FH+N+LGC N + ITA + S
Sbjct: 81 KDSKNFHVNVLGCTNFTFDGFTITAPSTSINTDGIHIGRSTDVKVLNTNIATGDDCVSLG 140
Query: 179 --SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDS-H 235
S+ I V V CGPG GISVGSLGK K+E V + V+NCTFT T NG R+KTWP +
Sbjct: 141 QGSRQITVQNVNCGPGHGISVGSLGKYPKEEAVEHVLVKNCTFTNTDNGARIKTWPSAPG 200
Query: 236 IGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
++ FEDI+M NV NP++IDQ YCP+N+C
Sbjct: 201 TSPITDMHFEDIIMVNVRNPVIIDQEYCPWNQC 233
>gi|297824383|ref|XP_002880074.1| hypothetical protein ARALYDRAFT_903793 [Arabidopsis lyrata subsp.
lyrata]
gi|297325913|gb|EFH56333.1| hypothetical protein ARALYDRAFT_903793 [Arabidopsis lyrata subsp.
lyrata]
Length = 387
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 166/366 (45%), Gaps = 75/366 (20%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASISF 87
NV FGA DG TD ++AF +W+ A TV VP G +L+ EF GPC++ I+F
Sbjct: 25 NVVSFGAKPDGRTDSTEAFLGAWQAACR-SAAAVTVTVPRGSFLLKPVEFRGPCRSRITF 83
Query: 88 QLQGLL---------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQL-P 131
Q+ G + LF +S+ GT +G + W + K+ C +
Sbjct: 84 QIYGTIVAPSDYRGLGNSGYWILFVKVNRISINGGTLDARGASFWACRKSGKS--CPVGA 141
Query: 132 TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADSS-- 179
+ FN+ ND +TG+ S++S+ H+ I C N+ + +K+ A H S
Sbjct: 142 RSMTFNWANDVVVTGLTSINSQATHLVINSCNNVIVRKVKLVAPDQSPNTDGLHVQGSAG 201
Query: 180 ---------------------KDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCT 218
+++ +S++ CGPG GIS+GSLG+ K+ V +T+ N
Sbjct: 202 VTVTDSTFQTGDDCISIGPGTRNLYMSKLNCGPGHGISIGSLGRDSKEAGVENITLINSV 261
Query: 219 FTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPN 278
F+ + NGVR+KTW G N F++++M NV+NPI++DQ YCP N+ K +
Sbjct: 262 FSGSDNGVRIKTWARQSTGFVRNVLFQNLIMKNVQNPIIVDQNYCPANQGCPKQGSGVKI 321
Query: 279 IEIGNRNLV-----------------------YNGVNVKVEGPETTSLCSNVKPTLFGKQ 315
++ RN+ + + + G T+ C N+K G
Sbjct: 322 SQVVYRNIQGTSRTQQALTFDCSRSNPCQAIRLHDIKLMFNGRSATATCKNIKGVKAGVV 381
Query: 316 IPATCV 321
+P C+
Sbjct: 382 MPQGCL 387
>gi|399764470|gb|AFP50435.1| polygalacturonase 3, partial [Medicago sativa subsp. caerulea]
Length = 236
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 113/213 (53%), Gaps = 40/213 (18%)
Query: 91 GLLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPT-PIRFNFLNDSTITGIKS 149
G +D F++ KG F G GETAW N C KNS C+ + FNFL S + I S
Sbjct: 26 GYVDYFTLS-----GKGVFDGNGETAWRQNDCGKNSTCKRRSMNFGFNFLKHSIVRDITS 80
Query: 150 VDSRYFHINILGCYNLKLNDLKITAHA--------------------------------- 176
DS+ FH+N+LGC N + ITA A
Sbjct: 81 KDSKNFHVNVLGCTNFTFDGFTITAPATSINTDGIHIGRSTDVKVLNTNIATGDDCVSLG 140
Query: 177 DSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDS-H 235
D S+ I V V CGPG GISVGSLGK K+E V + V NCT + T+NGVR+KTWP S
Sbjct: 141 DGSRQITVQNVNCGPGHGISVGSLGKYPKEEAVEHVLVXNCTXSNTANGVRIKTWPSSPG 200
Query: 236 IGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
++ FEDI+M NV NP++IDQ YCP+N+C
Sbjct: 201 TSPITDMHFEDIIMVNVLNPVIIDQEYCPWNQC 233
>gi|449529716|ref|XP_004171844.1| PREDICTED: polygalacturonase-like, partial [Cucumis sativus]
Length = 256
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 125/251 (49%), Gaps = 69/251 (27%)
Query: 134 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--------------- 178
+RFNF+ +S + I S+DS+ FH+NILGC NL + I A DS
Sbjct: 2 LRFNFVTNSIVRRITSLDSKNFHVNILGCNNLTFQGVNIIAPGDSPNTDGIHIGRSIGIS 61
Query: 179 ------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFT 220
SK I V+ V CGPG GIS+GSLGK +E V + V+NCT
Sbjct: 62 ILKSRIATGDDCISLGDGSKRIKVNNVTCGPGHGISIGSLGKYTNEEPVEDVIVKNCTII 121
Query: 221 CTSNGVRVKTWPDS-HIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC----------- 268
T+NGVR+KTWP S GIA+N F DI M NV NPIVIDQ YCP+N+C
Sbjct: 122 NTTNGVRIKTWPTSPAAGIATNMHFSDITMVNVSNPIVIDQEYCPWNQCNRKIPSNIKIN 181
Query: 269 -----NIKPKDSMP--------------NIEIGNRNLVYNGVNVKVEGPETTSLCSNVKP 309
NI+ + P +++ N +L+YNG+ + TS C NVKP
Sbjct: 182 KVSFKNIRGSSATPVAVKLICSSNLPCEEVKLSNIDLIYNGIKGSI-----TSQCMNVKP 236
Query: 310 TLFGKQIPATC 320
++G Q P C
Sbjct: 237 IIYGIQNPPIC 247
>gi|399764472|gb|AFP50436.1| polygalacturonase 3, partial [Medicago marina]
Length = 236
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 114/213 (53%), Gaps = 40/213 (18%)
Query: 91 GLLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPT-PIRFNFLNDSTITGIKS 149
G +D F++ KG F G GETAW N C KNS C+ + FNFL S + I S
Sbjct: 26 GYVDYFTLS-----GKGVFDGNGETAWRQNDCSKNSTCKRRSMNFGFNFLKHSIVRDITS 80
Query: 150 VDSRYFHINILGCYNLKLNDLKITAHADS------------------------------- 178
DS+ FH+N+LGC N + + ITA A S
Sbjct: 81 KDSKNFHVNVLGCTNFTFDGVTITAPATSINTDGIHIGRSTDVKVLNTNIATGDDCVSLG 140
Query: 179 --SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDS-H 235
S+ I V V+CG G GISVGSLGK K+E V + V+NCT + T NGVR+KTWP +
Sbjct: 141 GGSRQITVQNVYCGAGHGISVGSLGKYPKEEAVEHVLVKNCTISNTDNGVRIKTWPSAPG 200
Query: 236 IGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
++ FEDI+M NV NP++IDQ YCP+N+C
Sbjct: 201 TSPITDMHFEDIIMVNVLNPVIIDQEYCPWNQC 233
>gi|255576396|ref|XP_002529090.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223531441|gb|EEF33274.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 393
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/312 (32%), Positives = 144/312 (46%), Gaps = 51/312 (16%)
Query: 5 ARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVL 64
+ FS L I AT NV +GA DG TD +KAF +W +A T+
Sbjct: 7 SSFSFLALLILLFTSSLATAAQYNVLSYGAKPDGRTDSTKAFLAAWTQACG-STKPPTIY 65
Query: 65 VPPGKYLVSFAEFEGPCKA-SISFQLQGLLD---------------LFSIDTSLSLAKGT 108
VP GK+ + F GPCK +I F++ G L F ++++ G
Sbjct: 66 VPSGKFFLKDLSFGGPCKNNAILFRIDGTLVAPSDYKVIGNAGYWLYFQHVNGVTISGGI 125
Query: 109 FHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLN 168
GQG W KN T + F+ + I G+ S +S+ FHI I GC N+K+
Sbjct: 126 LDGQGSGLWACKASGKNCPSG-ATSLGFSNSKNIAINGLTSQNSQMFHIVINGCQNVKVQ 184
Query: 169 DLKITAHADS---------------------------------SKDILVSEVFCGPGQGI 195
+ ++A DS + ++ + + CGPG GI
Sbjct: 185 GVTVSASGDSPNTDGIHVQQSGGVTILNSKIRTGDDCISIGPGATNLWIENIACGPGHGI 244
Query: 196 SVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENP 255
S+GSLGK +++ V +TV+ TFT T NGVR+K+W G A N F+ +M NV+NP
Sbjct: 245 SIGSLGKDLQEAGVQNVTVKTVTFTGTQNGVRIKSWGRPSSGFARNILFQHAIMTNVQNP 304
Query: 256 IVIDQLYCPYNK 267
IVIDQ YCP NK
Sbjct: 305 IVIDQNYCPDNK 316
>gi|27902548|gb|AAO24261.1| putative pollen polygalacturonase [Turnera subulata]
Length = 382
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 158/332 (47%), Gaps = 57/332 (17%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
V ++K + AD ++A ++++ V+VP G+Y + + +GPCK+++
Sbjct: 26 VFDIKKYNPKAD----IAEALSAAFQKDACASATPSKVVVPAGEYTMGPVDMKGPCKSTV 81
Query: 86 SFQLQGLLDLFS-------------IDTSLSLAKGTFHGQGETAWPLNQCHKNSDC-QLP 131
Q+ G L + ID KG F GQG AW N C+KN +C P
Sbjct: 82 EVQVDGNLKAPAEPKGEPGWVSFEYIDGLTFSGKGVFDGQGHIAWANNNCNKNPNCKSFP 141
Query: 132 TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA--------------- 176
RF L + I + S DS+ FH+N++ C N+ + I A A
Sbjct: 142 LNFRFTSLKHALIKDLTSKDSKNFHVNVINCENVTFQNFVIDAPAESLNTDGIHMGRSKG 201
Query: 177 ------------------DSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCT 218
D ++ + V+ V CGPG GIS+GSLG+ ++ V G+ V+NC
Sbjct: 202 IKIIDSKIGTGDDCISIGDGTEQVTVTGVTCGPGHGISIGSLGRYDNEQPVRGVLVKNCI 261
Query: 219 FTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPN 278
T NGVR+K+WP G AS+ FEDI M NV NP++IDQ YCP+N+C KD+
Sbjct: 262 LKNTDNGVRIKSWPAMKGGEASDIHFEDITMENVTNPVIIDQEYCPWNQCT---KDAPSK 318
Query: 279 IEIGNRNLVYNGVNVKVEGPETTS-LCSNVKP 309
++I N+ + + PE +CS+ P
Sbjct: 319 VKI--SNVSFKNIKGTTNTPEAVKIICSSALP 348
>gi|1346705|sp|P48979.1|PGLR_PRUPE RecName: Full=Polygalacturonase; Short=PG; AltName: Full=Pectinase;
Flags: Precursor
gi|436420|emb|CAA54150.1| endopolygalacturonase [Prunus persica]
Length = 393
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 147/310 (47%), Gaps = 50/310 (16%)
Query: 7 FSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP 66
FSL + F+ + A+ NV GA ADG TD +KAF ++W +A G + VP
Sbjct: 8 FSLSLIFVFMINSAIASPLTYNVASLGAKADGKTDSTKAFLSAWAKACASMN-PGVIYVP 66
Query: 67 PGKYLVSFAEFEGPCKA-SISFQLQGLLD---------------LFSIDTSLSLAKGTFH 110
G + + F GPCK +I+F++ G L F ++++ G
Sbjct: 67 AGTFFLRDVVFSGPCKNNAITFRIAGTLVAPSDYRVIGNAANWIFFHHVNGVTISGGILD 126
Query: 111 GQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
GQG W CH S T + F+ N+ ++G+ S++S+ FHI I N+++ +
Sbjct: 127 GQGTALWACKACHGESCPSGATTLGFSDSNNIVVSGLASLNSQMFHIVINDFQNVQMQGV 186
Query: 171 KITAHADS---------------------------------SKDILVSEVFCGPGQGISV 197
+++ +S + ++ + V CGPG GIS+
Sbjct: 187 RVSRSGNSPNTDGIHVQMSSGVTILNSKIATGDDCVSIGPGTSNLWIEGVACGPGHGISI 246
Query: 198 GSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIV 257
GSLGK ++ V +TV+ TF+ T NG+R+K+W G A N F+ M NVENPIV
Sbjct: 247 GSLGKEQEEAGVQNVTVKTVTFSGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIV 306
Query: 258 IDQLYCPYNK 267
IDQ YCP NK
Sbjct: 307 IDQHYCPDNK 316
>gi|125555523|gb|EAZ01129.1| hypothetical protein OsI_23157 [Oryza sativa Indica Group]
Length = 413
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 162/344 (47%), Gaps = 71/344 (20%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCK-- 82
+ +V ++GA I D+ AF +WR A T+L+P G + VS EF GPCK
Sbjct: 22 HIYDVTEYGAEPSNI-DNKDAFLAAWRAACGSAAGNATLLIPEGTFAVSTVEFSGPCKNG 80
Query: 83 -ASISFQLQGLLD-----------------LFS-IDTSLSLAKGTFHGQGETAWPLNQCH 123
+ ++ + G+L FS + L GT G+G N
Sbjct: 81 RSPLAVVVDGVLHPCAGGCHRKSGDDDVWITFSGVSNLLVTGAGTLDGRGGEHGHSNGGG 140
Query: 124 KNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----- 178
K+ + T + + + ++T+ G++ ++SR FH+N+ ++ L+I A A S
Sbjct: 141 KS---KTTTTLELDSVANATVRGLRFLNSRGFHLNLHRSSHVAAERLRIEAPAASRNTDG 197
Query: 179 ----------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVV 210
S ++V+ V CGPG GISVGSLG+ + +V
Sbjct: 198 IHVGLSSHVTVADSLVGTGDDCVSIGPGSSGVVVAGVACGPGHGISVGSLGREEGEGDVR 257
Query: 211 GLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNI 270
GL VRNCT T+NG+R+KTWP S A N TF DIVM+NV NPI+IDQ YCP+ C+
Sbjct: 258 GLVVRNCTVVGTTNGLRIKTWPGSPPSRAFNITFRDIVMSNVSNPIIIDQHYCPHAHCSD 317
Query: 271 KPKDSMPNIEIGNRNLVYNGVNVKVEGPETTS-----LCSNVKP 309
K S+ I ++ Y ++EG ++ LCS +P
Sbjct: 318 IAKPSLVQIS----DVTYE----RIEGTSSSRVAVQLLCSEDRP 353
>gi|255576406|ref|XP_002529095.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223531446|gb|EEF33279.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 390
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 143/307 (46%), Gaps = 56/307 (18%)
Query: 8 SLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPP 67
+L + F +S +N NV FGA DG +D S+AF +W A G TV VP
Sbjct: 9 ALFLIFFSS--SFHESNAAYNVVSFGAKPDGKSDSSQAFVRAWLSACRSTG-PATVYVPK 65
Query: 68 GKYLVSFAEFEGPCKASISFQLQGLL----DLFSIDTS-----------LSLAKGTFHGQ 112
G +LV EF GPCK ISF + G + + +S TS +++ GT +
Sbjct: 66 GSFLVKPVEFSGPCKNKISFWIDGKIIAPTNYWSFGTSGFWILFYKVSRVTIHGGTLDAR 125
Query: 113 GETAWPLNQCHKNSDCQLPTPIRFNFL--NDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
G + W C + P +F+ +D ++G+ S++S+ FHI I +N+ L L
Sbjct: 126 GASFW---ACKRAGKVCPPGARSISFVGSSDVVVSGLTSMNSQMFHIAIHKSHNIVLQKL 182
Query: 171 KITA----------HADSS-----------------------KDILVSEVFCGPGQGISV 197
KI A H SS ++I + + CGPG GIS+
Sbjct: 183 KIIAPSLSPNTDGLHMQSSTGITIKDSTITTGDDCISLGPGSQNIWIQRIACGPGHGISI 242
Query: 198 GSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIV 257
GSL + +E V +TV N FT T NGVR+K+W N F DIVM N NPI+
Sbjct: 243 GSLAQYKNEEGVQNVTVANVVFTGTQNGVRIKSWERPSTAFVKNILFRDIVMKNTYNPII 302
Query: 258 IDQLYCP 264
IDQ YCP
Sbjct: 303 IDQEYCP 309
>gi|242056231|ref|XP_002457261.1| hypothetical protein SORBIDRAFT_03g004360 [Sorghum bicolor]
gi|241929236|gb|EES02381.1| hypothetical protein SORBIDRAFT_03g004360 [Sorghum bicolor]
Length = 411
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 103/317 (32%), Positives = 148/317 (46%), Gaps = 58/317 (18%)
Query: 7 FSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP 66
F +L+ + ++R + NV F A ADG TDDS+AF +W+ A + D + ++V
Sbjct: 25 FIMLLVLVWAIRSAQCHQQKYNVVRFHAAADGKTDDSQAFLATWQAACS-DQAR-PIMVI 82
Query: 67 PGK--YLVSFAEFEGPCKASISFQLQG---------------LLDLFSIDTSLSLAKGTF 109
PG+ +L+S F+GPCK+ I+ QL G LL + +D KG
Sbjct: 83 PGRRTFLLSEVTFQGPCKSPITIQLDGNIVAPNHIWTTEQTNLLTIHGVDNLTLDGKGEI 142
Query: 110 HGQGETAWPLNQCHKNSDCQL-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLN 168
G+G W C+ N C P + F+ ND + I+ +S H+ + C ++
Sbjct: 143 DGRGAIWW---DCYNNKRCHTRPILLAFSLCNDLWVRNIRLKNSADKHMTLFQCNQALID 199
Query: 169 DLKITAHADS---------------------------------SKDILVSEVFCGPGQGI 195
+ ITA ADS +K+I V+ CGPG GI
Sbjct: 200 GVSITAPADSPNTDGITVASSNSTTISNCSIQSGDDCVSILSHTKNITVTHSTCGPGHGI 259
Query: 196 SVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENP 255
SVGSLGK + +V + + NC+F T NGVR+K+W G A F F + M V+ P
Sbjct: 260 SVGSLGKS-ERAKVEQIVITNCSFVGTMNGVRIKSWQGGK-GYAKGFLFASLNMTEVQYP 317
Query: 256 IVIDQLYCPYNKCNIKP 272
IVIDQ YCP C KP
Sbjct: 318 IVIDQFYCPQGNCPTKP 334
>gi|449449647|ref|XP_004142576.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
gi|449473210|ref|XP_004153818.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 389
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 146/293 (49%), Gaps = 51/293 (17%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASISF 87
NV FGA DG TD +++F +W A + + T+ VP G++L++ F GPCK I+F
Sbjct: 27 NVISFGAKPDGKTDSTQSFLKAWTSACS-SSTRSTINVPKGRFLLTPITFRGPCKNKITF 85
Query: 88 QLQGLL---------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPT 132
L G L LF +S GT G+G W KN +
Sbjct: 86 LLNGTLVAPLDYRALGDSGYWILFIKVDGVSFVGGTIDGKGTAYWACKNSAKNCPPGARS 145
Query: 133 PIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADSS--- 179
I FN+ N+ ++G+ S++S+ H+ I C N+ + ++KI A H SS
Sbjct: 146 -ITFNWANNIILSGLTSINSQQTHVVINSCNNVVVKNVKIMAPDQSPNTDGIHVQSSTNV 204
Query: 180 --------------------KDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTF 219
K++ +S++ CGPG G+S+GSLGK + V +T+ N F
Sbjct: 205 TITGSTIKTGDDCISIGDGTKNLFMSDIKCGPGHGVSIGSLGKEANENGVENVTLINAVF 264
Query: 220 TCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP-YNKCNIK 271
T + NGVR+KTWP G + F++IVM NV+NPI+IDQ YCP + C+++
Sbjct: 265 TKSDNGVRIKTWPTPSNGFVRHVIFQNIVMINVKNPILIDQNYCPNHQSCSLQ 317
>gi|356577135|ref|XP_003556683.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Glycine
max]
Length = 399
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 147/316 (46%), Gaps = 54/316 (17%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK 60
LL+ R L +SV A NV +FGA +DG TD +KAF +W +A
Sbjct: 12 LLITLRVILGCWLCSSV----AFGATYNVVNFGAKSDGKTDSTKAFLNAWSKACASTN-P 66
Query: 61 GTVLVPPGKYLVSFAEFEGPCK-ASISFQLQGLL---DLFSIDTS------------LSL 104
++ VP GK+L+ F G C IS + G L +S+ S +S+
Sbjct: 67 ASIYVPQGKFLLKSVTFNGKCNNKGISITIDGTLVAPSDYSVTGSAGTWLEFERVDGVSI 126
Query: 105 AKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYN 164
G GQG W + + T + F N+ I G+ S++S+ FHI GC N
Sbjct: 127 RGGVLDGQGTALWDCKNSGRGNCPSGATTLAFTNSNNIAIGGLTSMNSQMFHIVFNGCQN 186
Query: 165 LKLNDLKITAHADS---------------------------------SKDILVSEVFCGP 191
+KL +K+ A +S + ++ + + CGP
Sbjct: 187 VKLQGVKVLADGNSPNTDGIHVQMSSHITILNSKIRTGDDCISVGPGTTNLWIENIACGP 246
Query: 192 GQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNN 251
G GIS+GSLGK +K+ V +TV+ TFT T NGVR+KTW G N F+D +M N
Sbjct: 247 GHGISIGSLGKDLKEAGVQNVTVKTVTFTGTQNGVRIKTWGRPSNGFVRNVLFQDAIMVN 306
Query: 252 VENPIVIDQLYCPYNK 267
VENP++IDQ YCP NK
Sbjct: 307 VENPVIIDQNYCPNNK 322
>gi|226530040|ref|NP_001141204.1| uncharacterized protein LOC100273291 precursor [Zea mays]
gi|194703252|gb|ACF85710.1| unknown [Zea mays]
gi|414879284|tpg|DAA56415.1| TPA: putative alcohol dehydrogenase superfamily protein [Zea mays]
Length = 401
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 143/313 (45%), Gaps = 57/313 (18%)
Query: 7 FSLLVSFITSVRGIDAT--NRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVL 64
SLLV +V + A V NV +GA DG+TD + F +W +A + V
Sbjct: 8 LSLLVHLHAAVLFLPAPAGGAVYNVLRYGARPDGVTDAAGPFLRAWADACR-SPLPAAVY 66
Query: 65 VPPGKYLVSFAEFEGPCKA-SISFQLQGL----------------LDLFSIDTSLSLAKG 107
VPPG+YLV A F GPC +++F + G + ++D + G
Sbjct: 67 VPPGRYLVRSATFTGPCHTRAVTFAVAGTVVAPAAYGARGSSGRWITFENMDGLVVAGGG 126
Query: 108 TFHGQGETAWPLNQCHKNSDCQLPTP-IRFNFLNDSTITGIKSVDSRYFHINILGCYNLK 166
T G+G W Q DC PT + D + G++SVDS FH+ +L C+ +
Sbjct: 127 TLDGRGRALWACRQ-RGQRDCPTPTSTLTIANSKDVVVAGLRSVDSELFHVVVLQCHGVT 185
Query: 167 LNDLKITAHADS---------------------------------SKDILVSEVFCGPGQ 193
+ + + A ADS + + + V CGPG
Sbjct: 186 VRGVTVEAPADSPNTDGIHLHMSTHVSVYDARISTGDDCISIGPGNSHLWIERVACGPGH 245
Query: 194 GISVGSLGK--GIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNN 251
GIS+GSLGK G + E V +TV+ FT T NG+R+KTW S G + TF D M+
Sbjct: 246 GISIGSLGKQQGTEVEAVQNVTVKTTWFTGTMNGLRIKTWGGSKRGFVTGVTFADSTMSG 305
Query: 252 VENPIVIDQLYCP 264
V+NPI+IDQ YCP
Sbjct: 306 VDNPIIIDQNYCP 318
>gi|42566075|ref|NP_191544.2| polygalacturonase [Arabidopsis thaliana]
gi|53749142|gb|AAU90056.1| At3g59850 [Arabidopsis thaliana]
gi|55167900|gb|AAV43782.1| At3g59850 [Arabidopsis thaliana]
gi|332646457|gb|AEE79978.1| polygalacturonase [Arabidopsis thaliana]
Length = 388
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 145/294 (49%), Gaps = 54/294 (18%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKG-TVLVPPGKYLVSFAEFEGP-CK 82
+ N+ +GA DG TD +KAF W +A +K T+LVP G++L+ F+G CK
Sbjct: 21 QTYNILSYGAKPDGKTDSTKAFTVLWAKAC--ASVKPVTILVPKGRFLLRSIIFDGSKCK 78
Query: 83 -ASISFQLQGLLD---------------LFSIDTSLSLAKGTFHGQGETAWPLNQCHKNS 126
S++F++QG L LF +S+ G QG + W + KN
Sbjct: 79 RKSVTFRIQGTLVAPSDYRVIGKENYWILFQHLDGISVYGGVLDAQGASLWSCKKSGKNC 138
Query: 127 DCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HA 176
T I F + I+G+ S++S+ FH+ I GC N+KL+ +K++A H
Sbjct: 139 PSG-ATSIGFQSSRNVVISGLTSLNSQMFHVAINGCSNVKLDGVKVSADGNSPNTDGIHV 197
Query: 177 DSSKDI-----------------------LVSEVFCGPGQGISVGSLGKGIKDEEVVGLT 213
SS + + V CGPG GIS+GSLGK + V +T
Sbjct: 198 QSSSTVSILNSKISTGDDCVSIGPGTNGLWIENVACGPGHGISIGSLGKESVEVGVQNIT 257
Query: 214 VRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
V+ TFT T NGVR+K+W G A N F+ VMNNV+NPIVIDQ YCP N+
Sbjct: 258 VKTATFTGTENGVRIKSWARPSNGFAKNIRFQHCVMNNVQNPIVIDQNYCPGNE 311
>gi|399764490|gb|AFP50445.1| polygalacturonase 11a, partial [Medicago sativa subsp. caerulea]
Length = 240
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 87/233 (37%), Positives = 118/233 (50%), Gaps = 39/233 (16%)
Query: 78 EGPCKASISFQLQGLLDLFSIDTSLSLAKGTFHGQGETAWPLNQ-----CHKNSDCQLPT 132
+ P S+ + +D KG F GQG T + KNS+ ++
Sbjct: 8 QAPADPSVIKGTEQWFKFLYMDHLTLSGKGVFDGQGATVYKKAAPAAAWSGKNSNSKVFM 67
Query: 133 PIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-------------- 178
FNF+N+S + G+ S DS+ FH+ + GC N+ + ITA DS
Sbjct: 68 NFGFNFVNNSIVRGVTSKDSKNFHVMVFGCKNITFDGFTITAPGDSPNTDGIHLGKSTDV 127
Query: 179 -------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTF 219
SK I V V CGPG G+SVGSLGK +E V G+T++NCT
Sbjct: 128 KILNTNIGTGDDCVSIGDGSKQITVQGVNCGPGHGLSVGSLGKFTTEENVEGITIKNCTL 187
Query: 220 TCTSNGVRVKTWPDSHIGIA-SNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK 271
T T NGVR+KTWPD+ I S+ FEDI M NV+NP++IDQ YCP+N+C+ K
Sbjct: 188 TATDNGVRIKTWPDAPGTITVSDIHFEDITMTNVKNPVIIDQEYCPWNQCSKK 240
>gi|3320460|gb|AAC26511.1| polygalacturonase precursor [Cucumis melo]
Length = 423
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 146/292 (50%), Gaps = 54/292 (18%)
Query: 27 LNVKDFGAVADGIT-DDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKAS- 84
NV DFGA + I D SKAF+++W++A + T+ VP K+ + A F+GPCK +
Sbjct: 51 FNVVDFGAKPNNIKIDSSKAFESAWKQACS-SSRAATIYVPKAKFYIYSATFKGPCKNNV 109
Query: 85 ISFQLQGLL---------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDC- 128
I+ Q+ G L +F +++ G GQG W H C
Sbjct: 110 ITLQMDGTLVAPPNFHLTAQSKTWIIFRQVNGVTVLGGVIDGQGSELWACK--HSGKTCP 167
Query: 129 QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---------- 178
+ T ++F + I+G+ S++S+ +HI I C N+++ L I A A+S
Sbjct: 168 RGTTSLQFTNSQNIVISGLTSLNSQIYHIVINKCRNVRMERLNIYAPANSPNTDGIDLEE 227
Query: 179 -----------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVR 215
+ ++L+ ++CGPG GIS+GSLG+ ++ V +TV+
Sbjct: 228 TSYVTILDSNIGTGDDCISVGPGTSNVLIQNIYCGPGHGISIGSLGRKERENGVQNVTVQ 287
Query: 216 NCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
+C T NGVR+K+W G A+N F+ I M +V+NPIVI+Q YCP+N+
Sbjct: 288 SCRLKKTQNGVRIKSWGRPSTGFATNIRFQHITMTDVKNPIVINQNYCPHNQ 339
>gi|195620576|gb|ACG32118.1| exopolygalacturonase precursor [Zea mays]
Length = 415
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/333 (33%), Positives = 163/333 (48%), Gaps = 57/333 (17%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCK-ASI 85
++ GA +DG TD +KA +W A G TV++P G YLV F GPCK +SI
Sbjct: 48 FDISKLGATSDGKTDCTKAVQDAWTSACEATG-SATVVIPKGDYLVGPLNFTGPCKGSSI 106
Query: 86 SFQLQGLL--------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLP 131
+ QL G L +L ++ GT GQG + ++ N
Sbjct: 107 AIQLDGNLLGSNDLNKYTASWIELSHVNNIGITGSGTLDGQGTAVYSKSK-TDNVKAMPN 165
Query: 132 TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD-----------SSK 180
T + F+ +N +T+ GIK ++S++FHINI ++ + D+ +TA AD SSK
Sbjct: 166 TLVLFHVIN-ATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSK 224
Query: 181 ----------------------DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCT 218
+LV + CGPGQGISVG LG+ +++V +TVRN
Sbjct: 225 ISILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRN-L 283
Query: 219 FTCTSNGVRVKTWPDSH-IGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMP 277
T+NGVR+K++ D+ + AS+ TFE+I M V NPIVIDQ +CP C K +S
Sbjct: 284 LKNTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVCPGKRSNSS- 342
Query: 278 NIEIGNRNLVYNGVNVKVEGPETTS-LCSNVKP 309
+ +++ + + PE S LCS +P
Sbjct: 343 --HVSVKDVTFRNITGTSSTPEAISLLCSETQP 373
>gi|147858963|emb|CAN78679.1| hypothetical protein VITISV_033513 [Vitis vinifera]
Length = 376
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 140/294 (47%), Gaps = 50/294 (17%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPC 81
AT NV + GA DG TD +KAF +W A T+ VPPG+YL+ A F G
Sbjct: 8 ATAVTYNVVNLGAKGDGHTDSTKAFLNAWAAACG-SASPATIYVPPGRYLLRNAVFRGCK 66
Query: 82 KASISFQLQGLLDL---------------FSIDTSLSLAKGTFHGQGETAWPLNQCHKNS 126
+I+F++ L F T +S+ G GQG W + K+
Sbjct: 67 NHAITFRIDATLVAPSDYRVIGNAANWLAFQDVTGVSIIGGVLDGQGTGLWACKRSGKSC 126
Query: 127 DCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-------- 178
T + N+ I G+ S++S+ FHI I GC+ +KL ++++A S
Sbjct: 127 PSG-ATTLGLTKSNNILIRGLTSLNSQMFHIVINGCHVVKLQGVRVSASGHSPNTDGIHV 185
Query: 179 -------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLT 213
+ ++ + V CGPG GIS+GSLGK +K+E V +T
Sbjct: 186 QLSSGVTILDTQIKTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKDLKEEGVQNVT 245
Query: 214 VRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
V+ TFT + NGVR+K+W + G F+ I+M NV+NPIVIDQ YCP +K
Sbjct: 246 VKTVTFTGSQNGVRIKSWARASNGFVKRVVFQHILMVNVQNPIVIDQNYCPGHK 299
>gi|356519796|ref|XP_003528555.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 398
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 136/295 (46%), Gaps = 50/295 (16%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPC 81
A NV +FGA +DG TD +KAF +W +A ++ VP GK+L+ A F G C
Sbjct: 28 ALGATYNVVNFGAKSDGKTDSTKAFLNAWAKACASTN-PASIYVPQGKFLLKSATFNGKC 86
Query: 82 K-ASISFQLQGLLDL---------------FSIDTSLSLAKGTFHGQGETAWPLNQCHKN 125
IS + G L F +S+ G GQG W K
Sbjct: 87 NNKGISITIDGTLVAPSDYRVTENSGNWLEFERVNGVSIHGGALDGQGTALWDCKNSGKG 146
Query: 126 SDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------- 178
+ T + F N+ I G+ S++S+ FHI GC N+KL +K+ A +S
Sbjct: 147 NCPSGATTLAFTNSNNIAIGGLTSMNSQLFHIVFNGCQNVKLQGVKVLADGNSPNTDGIH 206
Query: 179 --------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGL 212
+ ++ + + CGPG GIS+GSLGK +K+ V +
Sbjct: 207 IQMSSHVAIINSKIRTGDDCISIGPGTTNLWIENIACGPGHGISIGSLGKDLKEAGVQNV 266
Query: 213 TVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
TV+ TFT T NGVR+KTW G N F+D +M NVENP++IDQ YC NK
Sbjct: 267 TVKTVTFTGTQNGVRIKTWGRPSNGFVRNVLFQDAIMENVENPVIIDQNYCSDNK 321
>gi|359494421|ref|XP_003634775.1| PREDICTED: LOW QUALITY PROTEIN: exopolygalacturonase-like [Vitis
vinifera]
Length = 246
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/242 (38%), Positives = 120/242 (49%), Gaps = 54/242 (22%)
Query: 134 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--------------- 178
+RFNF+ ++ + I S DS+ FHIN+LGC NL ++ I+A DS
Sbjct: 5 LRFNFITNNMVKDITSRDSKQFHINLLGCGNLTFYNVAISAPKDSLNTDGIHIGRSSGID 64
Query: 179 ------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFT 220
S I + + CG G GI VGSLGK +E +VG++V+NCTF
Sbjct: 65 ITDSAIETGDDCVSIGDGSGQINIQRITCGLGHGICVGSLGKYPNEEPMVGISVKNCTFI 124
Query: 221 CTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNIE 280
T NGVRVKTW SH S EDIVMNNV NPI+IDQ YCP+N+CN+K +
Sbjct: 125 NTQNGVRVKTWSASHQDTTSEMHLEDIVMNNVGNPIIIDQKYCPHNQCNLKRLSRIKLSN 184
Query: 281 IGNRNL---VYNGVNVKV----------------EGPE--TTSLCSNVKPTLFGKQIPAT 319
+ RN+ V VK+ G E S C N+KP L KQ+P T
Sbjct: 185 VSFRNIQGTTSTQVPVKLVCSQGVPCQDFELGDNNGNEGLAMSQCKNIKPNLLDKQLPRT 244
Query: 320 CV 321
C
Sbjct: 245 CA 246
>gi|356498559|ref|XP_003518118.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 481
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 146/297 (49%), Gaps = 57/297 (19%)
Query: 20 IDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEG 79
I ++ + +NV D+GA DG TDD++AF+ +W A + G +LVP YL+ F G
Sbjct: 108 ISSSLKTVNVNDYGARGDGKTDDTQAFNDAWEVACSSGG--AVLLVPENNYLLKPFRFSG 165
Query: 80 PCKASISFQLQGLLDL--------------FSIDTSLSLA---KGTFHGQGETAWPLNQC 122
PC+++I Q+ G ++ + D+ L+ GT HG G W N C
Sbjct: 166 PCRSNIEVQISGTIEASENLSDYSEDLTHWLTFDSVEKLSVKGGGTIHGNGNIWWQ-NSC 224
Query: 123 HKNSD--CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS- 178
N C+ PT + F ND T+ + + + ++ N+K++ L +TA DS
Sbjct: 225 KVNEKLPCKDAPTALTFYKCNDLTVEDLTIKNGQKMQVSFQDSENVKVSGLTVTAPGDSP 284
Query: 179 --------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKD 206
SKD+L +++ CGPG GIS+GSLG G
Sbjct: 285 NTDGIHVTNTQNIQISSSVIGTGDDCISIVSGSKDVLATDIICGPGHGISIGSLGAGGSK 344
Query: 207 EEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
+ V G+TV+ + T+NG+R+KTW G ASN F++I M+NV NPI+IDQ YC
Sbjct: 345 DFVSGITVKGAMLSGTTNGLRIKTWQGGS-GSASNIQFQNIQMDNVTNPIIIDQNYC 400
>gi|3834451|gb|AAC70951.1| polygalacturonase 7 [Solanum lycopersicum]
Length = 397
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 147/296 (49%), Gaps = 58/296 (19%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEG-P 80
A N + NV+ +GA +DG +D S AF ++W A T+ VP G YL++ F G
Sbjct: 25 AANSMYNVQTYGANSDGKSDSSNAFVSAWTAACA-STSAATIYVPKGSYLLNNVYFFGQS 83
Query: 81 CKAS-ISFQLQGLL----DLFSIDTS-----------LSLAKGTFHGQGETAWPLNQCHK 124
CK++ I+ ++G L D I S +S+ GT GQG W K
Sbjct: 84 CKSNDITIHIEGTLIAPSDYNVIGKSGNWIKFERVNGVSIVGGTLDGQGTRLWTC----K 139
Query: 125 NSDCQLP---TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA------- 174
NS P T + F ND TI+G+ S DS+ FHI + GC+N KL +KI+A
Sbjct: 140 NSGKGCPKGATTLAFYNSNDITISGLTSKDSQMFHILLDGCHNAKLQGVKISAPGNSPNT 199
Query: 175 ---HADSSKDILV-----------------------SEVFCGPGQGISVGSLGKGIKDEE 208
H SS D+ + + CGPG GIS+GSLG +++
Sbjct: 200 DGIHLQSSSDVTILNSQIGTGDDCISIGPGNSNLWFENIACGPGHGISIGSLGWEMQEAG 259
Query: 209 VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
V +TV+ +FT T NGVRVKTW G N F+ +VMNNV+NPI+IDQ YCP
Sbjct: 260 VQNVTVKTSSFTGTENGVRVKTWARPSNGFVRNVLFQHVVMNNVQNPIIIDQNYCP 315
>gi|297820832|ref|XP_002878299.1| hypothetical protein ARALYDRAFT_486450 [Arabidopsis lyrata subsp.
lyrata]
gi|297324137|gb|EFH54558.1| hypothetical protein ARALYDRAFT_486450 [Arabidopsis lyrata subsp.
lyrata]
Length = 388
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/297 (34%), Positives = 145/297 (48%), Gaps = 54/297 (18%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKG-TVLVPPGKYLVSFAEFEGP 80
++ + N+ +GA DG TD +KA W +A +K T+LVP G++ + F+G
Sbjct: 18 SSAQTYNILSYGAKPDGKTDSTKALTAVWAKA--CASVKPVTILVPKGRFFLRSIIFDGA 75
Query: 81 -CK-ASISFQLQGLL---------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCH 123
CK S++F++QG L LF LS+ G QG + W +
Sbjct: 76 KCKRKSVTFRIQGTLVAPSDYRIIGKENYWILFQHLDGLSVYGGVLDAQGTSLWSCKKSG 135
Query: 124 KNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA--------- 174
KN T I F ++ I+G+ S++S+ FH+ I GC N+KL +K++A
Sbjct: 136 KNCPSGA-TSIGFQSSSNVVISGLTSLNSQMFHVAINGCRNVKLEGVKVSADGNSPNTDG 194
Query: 175 -HADSSKDI-----------------------LVSEVFCGPGQGISVGSLGKGIKDEEVV 210
H SS + + V CGPG GIS+GSLGK + V
Sbjct: 195 IHVQSSSTVSILNSKISTGDDCVSIGPGTNGLWIENVACGPGHGISIGSLGKESVEAGVQ 254
Query: 211 GLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
+TV+ TFT T NGVR+K+W G A N F+ VMNNV+NPIVIDQ YCP N+
Sbjct: 255 NITVKTATFTGTENGVRIKSWARPSNGFAKNIRFQHCVMNNVQNPIVIDQNYCPGNE 311
>gi|242055243|ref|XP_002456767.1| hypothetical protein SORBIDRAFT_03g042350 [Sorghum bicolor]
gi|241928742|gb|EES01887.1| hypothetical protein SORBIDRAFT_03g042350 [Sorghum bicolor]
Length = 403
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 137/296 (46%), Gaps = 54/296 (18%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPC 81
A V NV +GA DG TD + F +W +A TV VPPG+YLV A F GPC
Sbjct: 25 AGGAVYNVLRYGARPDGATDAAGPFLRAWADACR-SPRPATVYVPPGRYLVRSATFTGPC 83
Query: 82 KAS-ISFQLQGL----------------LDLFSIDTSLSLAKGTFHGQGETAWPLNQCHK 124
+S ++F + G + ++D + GT G+G W +
Sbjct: 84 HSSAVTFAIAGTVVAPARYGARGSSGRWITFENMDGLVVSGGGTLDGRGRALWACRRRGG 143
Query: 125 NSDCQLPT-PIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----- 178
DC PT + + + G++SVDS FH+ +L C+ + + + + A ADS
Sbjct: 144 QRDCPNPTSSLTIANSRNVVVAGVRSVDSELFHVVVLQCHGVTVRGVTVEAPADSPNTDG 203
Query: 179 ----------------------------SKDILVSEVFCGPGQGISVGSLGK--GIKDEE 208
+ + + V CGPG GIS+GSLGK G++ E
Sbjct: 204 IHMHMSSHVSVYDARISTGDDCISIGPGNSHLWIERVACGPGHGISIGSLGKQQGMEVEA 263
Query: 209 VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
V +TV+ FT T NG+R+KTW S G + TF D M+ V+NPI+IDQ YCP
Sbjct: 264 VQNVTVKTTWFTGTMNGLRIKTWGGSKRGFVTGVTFADSTMSGVDNPIIIDQNYCP 319
>gi|449498570|ref|XP_004160573.1| PREDICTED: exopolygalacturonase clone GBGE184-like [Cucumis
sativus]
Length = 440
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/355 (32%), Positives = 164/355 (46%), Gaps = 64/355 (18%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKA-S 84
V +V GA ADG TDD++AF T+W A L+P +LV F GPCK+
Sbjct: 87 VFDVTKHGAKADGETDDAQAFMTTWIAACRNTVGPAKFLIPQDIFLVGPVTFAGPCKSFP 146
Query: 85 ISFQLQGLLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTI 144
I+ + QG + + D S + F + T + L D Q + I+F+ LN + I
Sbjct: 147 ITLENQGTVKA-TTDISAYSSSEWFSIEDVTGFILTGSGV-FDGQGVSSIKFSRLNHTII 204
Query: 145 TGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADSSK-------------- 180
G+ S++S FH ++ CYN ++KITA H +SK
Sbjct: 205 DGLTSINSMGFHTSVFYCYNFTATNMKITAPHNSPNTDGMHLSTSKLVTISNSIIGTGDD 264
Query: 181 ---------DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTW 231
+I+++ V CGPG G+SVGSLGK K++ V + V+NCT +NG R+KT+
Sbjct: 265 CVSIGHSTENIIITNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTF 324
Query: 232 PDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYN--KCNIKPKDSM------------- 276
G+AS FEDIVM NV+NPI+IDQ Y + N K D +
Sbjct: 325 ASPIPGLASRIVFEDIVMYNVKNPIIIDQTYGTEEGKESNWKVSDILFKNIRGTSTTNVA 384
Query: 277 -----------PNIEIGNRNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 320
+E+ + NL Y G +++ S CSN K FG Q P C
Sbjct: 385 VLLECSKLFPCEGVELRDINLTYGGTDLR--NTTVVSSCSNAKIATFGVQNPPPC 437
>gi|224092840|ref|XP_002309718.1| predicted protein [Populus trichocarpa]
gi|222852621|gb|EEE90168.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/309 (33%), Positives = 148/309 (47%), Gaps = 55/309 (17%)
Query: 8 SLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPP 67
SL++ F S+ G NV ++GA DG TD +KAF +W +A + T+ VPP
Sbjct: 13 SLVIVFAPSLAGAAQ----YNVLNYGAKPDGRTDSTKAFLAAWTQACGSIS-RSTLYVPP 67
Query: 68 GKYLVSFAEFEGPCKA-SISFQLQGLL----DLFSIDTS-----------LSLAKGTFHG 111
G+Y + +F GPCK +I ++ G L D I + ++++ G G
Sbjct: 68 GRYFLRNVQFSGPCKNNAILVRIDGSLLAPTDYRVIGNAANWISFQHVDGVTVSGGILDG 127
Query: 112 QGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLK 171
G W Q KN T N N I+G+ S++S+ FHI + GC+N+++ +K
Sbjct: 128 HGSGLWDCKQSGKNCPSGATTLGVSNSQN-IVISGLHSLNSQMFHIVVNGCHNVRIQGVK 186
Query: 172 ITAHADS---------------------------------SKDILVSEVFCGPGQGISVG 198
ITA +S + ++ + V CGPG GIS+G
Sbjct: 187 ITASGNSPNTDGIHVQLSSGVTILNSKIGTGDDCVSVGAGTTNLWIENVVCGPGHGISIG 246
Query: 199 SLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVI 258
SLGK + + V +TV+ TF T NG+R+KTW G N F+ VM V+NPIVI
Sbjct: 247 SLGKDLVEPGVQNVTVKTVTFIGTQNGLRIKTWGRPSNGFVRNVLFQHAVMTKVQNPIVI 306
Query: 259 DQLYCPYNK 267
DQ YCP NK
Sbjct: 307 DQNYCPDNK 315
>gi|449479814|ref|XP_004155715.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 389
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 146/293 (49%), Gaps = 51/293 (17%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASISF 87
NV FGA DG TD +++F +W A + + T+ VP G++L++ F GPCK ++F
Sbjct: 27 NVISFGAKPDGKTDSTQSFLKAWTSACS-SSTRSTINVPKGRFLLTPITFRGPCKNKVTF 85
Query: 88 QLQGLL---------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPT 132
L G L LF +S G+ G+G W KN +
Sbjct: 86 LLNGTLVAPLDYRALGDSGYWILFIKVDGVSFVGGSIDGKGTAYWACKNSPKNCPPGARS 145
Query: 133 PIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADSS--- 179
I FN+ N+ ++G+ S++S+ H+ I C N+ + ++KI A H SS
Sbjct: 146 -ITFNWANNIILSGLTSINSQQTHVVINSCNNVVVKNVKIMAPDQSPNTDGIHVQSSTNV 204
Query: 180 --------------------KDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTF 219
K++ +S++ CGPG G+S+GSLGK + V +T+ N F
Sbjct: 205 TITGSTIKTGDDCISIGDGTKNLFMSDIKCGPGHGVSIGSLGKEANENGVENVTLINAVF 264
Query: 220 TCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP-YNKCNIK 271
T + NGVR+KTWP G + F++IVM NV+NPI+IDQ YCP + C+++
Sbjct: 265 TKSDNGVRIKTWPTPSNGFVRHVIFQNIVMINVKNPILIDQNYCPNHQSCSLQ 317
>gi|15224381|ref|NP_181916.1| putative polygalacturonase /pectinase [Arabidopsis thaliana]
gi|3212875|gb|AAC23426.1| putative polygalacturonase [Arabidopsis thaliana]
gi|330255246|gb|AEC10340.1| putative polygalacturonase /pectinase [Arabidopsis thaliana]
Length = 394
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 139/290 (47%), Gaps = 52/290 (17%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
NV+ +GA DG D +K+F T+W A + V VP G YLV F GPCK I+
Sbjct: 31 FNVQRYGARGDGRADATKSFLTAWSLACG-SRARAMVYVPRGTYLVKNLVFWGPCKNIIT 89
Query: 87 FQLQGLL---------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDC-QL 130
F+ G L LF+ +S+ GT +G W + K S C Q
Sbjct: 90 FKNDGTLVAPANYWDIGNSGYWILFAKVNRISVYGGTIDARGAGYWSCRK--KGSHCPQG 147
Query: 131 PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------ 178
I F++ N+ ++G+ S +S+ H+ + N+++ +++I A + S
Sbjct: 148 ARSISFSWCNNVLLSGLSSFNSQNMHVTVHHSSNVRIENVRIRAPSGSPNTDGIHVQSSS 207
Query: 179 ---------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNC 217
S++I + V CGPG GIS+GSLG +E V +TV +
Sbjct: 208 GVTISGGTIATGDDCIALSQGSRNIWIERVNCGPGHGISIGSLGDYANEEGVQNVTVTSS 267
Query: 218 TFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
FT T NGVR+KTW G +N F +++MNNVENP++IDQ YCP K
Sbjct: 268 VFTKTQNGVRIKTWARPSRGFVNNVVFRNLIMNNVENPVIIDQNYCPNGK 317
>gi|30349275|gb|AAP21999.1| endopolygalacturonase [Prunus persica]
Length = 352
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 138/288 (47%), Gaps = 50/288 (17%)
Query: 29 VKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKA-SISF 87
V GA ADG TD +KAF ++W +A G + VP G + + F GPCK +I+F
Sbjct: 1 VASLGAKADGKTDSTKAFLSAWAKACASMN-PGVIYVPAGTFFLRDVVFSGPCKNNAITF 59
Query: 88 QLQGLLD---------------LFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPT 132
++ G L F ++++ G GQG W H S T
Sbjct: 60 RIAGTLVAPSDYRVIGNAANWIFFHHVNGVTISGGILDGQGTALWACKASHGESCPSGAT 119
Query: 133 PIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-------------- 178
+ F+ N+ ++G+ S++S+ FHI I C N+++ ++++A +S
Sbjct: 120 TLGFSDSNNIVVSGLASLNSQMFHIVINDCQNVQMQGVRVSASGNSPNTDGIHVQMSSGV 179
Query: 179 -------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTF 219
+ ++ + V CGPG GIS+GSLGK ++ V +TV+ TF
Sbjct: 180 TILNSKIATGDDCVSIGPGTSNLWIEGVACGPGHGISIGSLGKEQEEAGVQNVTVKTVTF 239
Query: 220 TCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
T T NG+R+K+W G A N F+ M NVENPIVIDQ YCP NK
Sbjct: 240 TGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIVIDQHYCPDNK 287
>gi|356498258|ref|XP_003517970.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 395
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 166/370 (44%), Gaps = 73/370 (19%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPC 81
A NV FGA DG TD ++ F SW+ A T+ VP G+YL+ F GPC
Sbjct: 27 APTSTYNVVKFGAKPDGKTDSTEPFIKSWQSACTSLN-PATIFVPKGRYLLKNTNFRGPC 85
Query: 82 KASISFQLQGLL---------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNS 126
K ++F + G L LF+ +L ++ G +G W + K+
Sbjct: 86 KRKVTFLIAGTLVASEDYHALGNSGFWILFNHVDNLVVSGGRLDAKGAGFWNCRRSGKSC 145
Query: 127 DCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH----------- 175
+ + FN++N+ ++GI S++S+ HI I C N+ + ++++ A
Sbjct: 146 PVGARS-MTFNWVNNLVVSGITSINSQLSHIVINACNNVLVKNVRLIAPDQSPNTDGIHV 204
Query: 176 ----------------------ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLT 213
D++ +I +S + CGPG G+S+GSLG+ + ++ V +T
Sbjct: 205 ERSTGVTINGCTLQTGDDCISIGDATYNIFMSHIKCGPGHGVSIGSLGQKLDEKGVENVT 264
Query: 214 VRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK------ 267
+ N F+ + NGVR+KTW G N F++I+M+NVENPI+IDQ YCP N+
Sbjct: 265 LTNAIFSGSDNGVRIKTWARPSNGFVRNVLFQNIIMDNVENPIIIDQNYCPNNQGCPGQT 324
Query: 268 ----------CNIKPKDSMPNIEIGN-------RNLVYNGVNVKVEGPETTSLCSNVKPT 310
NI + P + + + + VN+ + TS C N+ T
Sbjct: 325 SGIKISQITYLNINGSSATPEAVTFDCSPSNPCQGIKLHDVNLTYKNKAATSSCKNIDGT 384
Query: 311 LFGKQIPATC 320
G P +C
Sbjct: 385 STGTLAPESC 394
>gi|399764484|gb|AFP50442.1| polygalacturonase 11a, partial [Medicago rigiduloides]
Length = 240
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 118/233 (50%), Gaps = 39/233 (16%)
Query: 78 EGPCKASISFQLQGLLDLFSIDTSLSLAKGTFHGQGETAWPLNQ-----CHKNSDCQLPT 132
+ P S+ + +D KG F GQG T + K+S+ ++
Sbjct: 8 QAPADPSVIKGTEQWFKFLYMDHLTLSGKGVFDGQGATVYKKAAPAAAWSGKSSNSKVFM 67
Query: 133 PIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-------------- 178
FNF+N+S + G+ S DS+ FH+ + GC N+ + +TA DS
Sbjct: 68 NFGFNFVNNSMVRGVTSKDSKNFHVMVFGCNNITFDGFTVTAPGDSPNTDGIHMGKSTDV 127
Query: 179 -------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTF 219
SK I V V CGPG G+S+GSLGK +E V G+T++NCT
Sbjct: 128 KILNTNIGTGDDCISIGDGSKQITVQGVNCGPGHGLSIGSLGKFTTEENVEGITIKNCTL 187
Query: 220 TCTSNGVRVKTWPDSHIGIA-SNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK 271
T T NGVR+KTWPD+ I S+ FEDI M NV+NP++IDQ YCP+N+C+ K
Sbjct: 188 TATDNGVRIKTWPDAPGTITVSDIHFEDITMTNVKNPVIIDQEYCPWNQCSKK 240
>gi|449453427|ref|XP_004144459.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 399
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 141/290 (48%), Gaps = 51/290 (17%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASISF 87
NV +FGA DG TD ++AF T W A T+ VP G+Y + F GPCK + F
Sbjct: 34 NVVNFGAKGDGRTDSTQAFQTVWSNACA-STKPTTIYVPRGRYYLRSGTFNGPCKNNAIF 92
Query: 88 -QLQGLL----DLFSIDTS-----------LSLAKGTFHGQGETAWPLNQCHKNSDC-QL 130
++ G L D I S ++++ G G+G W ++ C
Sbjct: 93 IRIDGTLVAPSDFQVIGNSAAWVVFRHVDGVTISGGNLDGKGAGLWTCKNSSISTTCPSG 152
Query: 131 PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------ 178
T ++F+ + ++ + S++S+ FHI I GC N+ + LK+ A +S
Sbjct: 153 ATTLQFSNSKNVVVSALTSLNSQMFHIVIHGCQNVMMKGLKVLASGNSPNTDGIHVQMST 212
Query: 179 ---------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNC 217
+ ++ + + CGPG GIS+GSL K ++++ V +TV+N
Sbjct: 213 DVAILNSKIGTGDDCISIGPGTSNLRIENIICGPGHGISIGSLAKDLQEDGVQNVTVKNV 272
Query: 218 TFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
F+ T NGVR+K W G A N F+ IVM+NV+NPIVIDQ YCP +K
Sbjct: 273 VFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNPIVIDQNYCPSHK 322
>gi|326516060|dbj|BAJ88053.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 436
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 157/333 (47%), Gaps = 78/333 (23%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPC 81
A + +V ++GA + D+ AF +WR A + T+L+P G + V EF GPC
Sbjct: 29 AAAGLYDVTEYGA-SQSSKDNKDAFLAAWRAACSSTTGNATLLIPEGTFAVGAVEFSGPC 87
Query: 82 KASIS--FQLQGLLD--------------LFSIDTSLSL-AKGTFHGQGET--------- 115
K+ + + G+L FS ++L + GT GQG
Sbjct: 88 KSGGAPVVVIDGVLRPCTGGCHLSDDDWITFSALSNLLITGAGTLDGQGGAQTSKAKATV 147
Query: 116 -------------AWPLNQCHKNSDCQLPTPIR---FNFLNDSTITGIKSVDSRYFHINI 159
++P C ++ + L ++ + + +ST+ G++ VDSR FH++
Sbjct: 148 MTPAANYGSIKFVSFP--SCVRDGEVILRAIVQTLELDGVTNSTVRGLRFVDSRGFHVSF 205
Query: 160 LGCYNLKLNDLKITAHADS---------------------------------SKDILVSE 186
++ L+I A A S S D++V+
Sbjct: 206 HRSSSVAAEGLRIHAPASSRNTDGIHVGCSSHVRITDSVIGTGDDCVSVGPGSSDVVVTG 265
Query: 187 VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFED 246
+ CGPG GISVGSLG+ +E+V GL +RNCT T+NG+R+KTWP S G A+N TFED
Sbjct: 266 IVCGPGHGISVGSLGREEGEEDVRGLVIRNCTVRGTTNGLRIKTWPGSPPGRATNITFED 325
Query: 247 IVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNI 279
I+M +V NPI+IDQ YCP+ +C+ K S I
Sbjct: 326 IIMADVSNPILIDQQYCPHGRCSDVDKPSRVQI 358
>gi|399764486|gb|AFP50443.1| polygalacturonase 11a, partial [Medicago rigidula]
Length = 240
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 117/233 (50%), Gaps = 39/233 (16%)
Query: 78 EGPCKASISFQLQGLLDLFSIDTSLSLAKGTFHGQGETAWPLNQ-----CHKNSDCQLPT 132
+ P S+ + +D KG F GQG T + K S+ ++
Sbjct: 8 QAPADPSVIKGTEQWFKFLYMDHLTLSGKGVFDGQGATVYKKAAPAAAWSGKGSNSKVFM 67
Query: 133 PIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-------------- 178
FNF+N+S + G+ S DS+ FH+ + GC N+ + +TA DS
Sbjct: 68 NFGFNFVNNSMVRGVTSKDSKNFHVMVFGCNNITFDGFTVTAPGDSPNTDGIHMGKSTDV 127
Query: 179 -------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTF 219
SK I V V CGPG G+S+GSLGK +E V G+T++NCT
Sbjct: 128 KILNTNIGTGDDCISIGDGSKQITVQGVNCGPGHGLSIGSLGKFTTEENVEGITIKNCTL 187
Query: 220 TCTSNGVRVKTWPDSHIGIA-SNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK 271
T T NGVR+KTWPD+ I S+ FEDI M NV+NP++IDQ YCP+N+C+ K
Sbjct: 188 TATDNGVRIKTWPDAPGTITVSDIHFEDITMTNVKNPVIIDQEYCPWNQCSKK 240
>gi|426204263|gb|AFY12688.1| polygalacturonase 11c, partial [Medicago sativa subsp. caerulea]
Length = 240
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/206 (40%), Positives = 111/206 (53%), Gaps = 39/206 (18%)
Query: 105 AKGTFHGQGETAWPLNQ-----CHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINI 159
KG F GQG T + KNS+ ++ + F F+N+S + G+ S DS+ FH+ +
Sbjct: 35 GKGVFDGQGATVYKKAAPAAAWSGKNSNVKIFMNLGFMFVNNSMVHGLTSKDSKNFHVMV 94
Query: 160 LGCYNLKLNDLKITAHADS---------------------------------SKDILVSE 186
LGC N + +TA DS S+ I V
Sbjct: 95 LGCNNFTFDGFTVTAPGDSPNTDGIHMGRSTDIKILNTNIATGDDCISLGDGSRKITVQN 154
Query: 187 VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIA-SNFTFE 245
V CGPG GISVGSLGK ++ V G+ V+NCT T T NGVR+KTWPD+ I S+ FE
Sbjct: 155 VKCGPGHGISVGSLGKYTTEDNVEGVIVKNCTLTATQNGVRIKTWPDAPGTITVSDIHFE 214
Query: 246 DIVMNNVENPIVIDQLYCPYNKCNIK 271
DI+MNNV NP++IDQ YCP+N+C+ K
Sbjct: 215 DIIMNNVMNPVIIDQEYCPWNQCSKK 240
>gi|449506105|ref|XP_004162654.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 399
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 140/290 (48%), Gaps = 51/290 (17%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASISF 87
NV +FGA DG TD ++AF T W A T+ VP G+Y + F GPCK + F
Sbjct: 34 NVVNFGAKGDGRTDSTQAFQTVWSNACA-STKPTTIYVPRGRYYLRSGTFNGPCKNNAIF 92
Query: 88 -QLQGLL----DLFSIDTS-----------LSLAKGTFHGQGETAWPLNQCHKNSDC-QL 130
++ G L D I S ++++ G G+G W ++ C
Sbjct: 93 IRIDGTLVAPSDFQVIGNSAAWVVFRHVDGVTISGGNLDGKGAGLWTCKNSSISTTCPSG 152
Query: 131 PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADSSK 180
T ++F+ + ++ + S++S+ FHI I GC N+ + LK+ A H S
Sbjct: 153 ATTLQFSNSKNVVVSALTSLNSQMFHIVIHGCQNVMMKGLKVLASGNSPNTDGIHVQMST 212
Query: 181 DILV-----------------------SEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNC 217
D+ + + CGPG GIS+GSL K ++++ V +TV+N
Sbjct: 213 DVAILNSKIGTGDDCISIGPGTSNLHIENIICGPGHGISIGSLAKDLQEDGVQNVTVKNV 272
Query: 218 TFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
F+ T NGVR+K W G A N F+ IVM+NV+NPIVIDQ YCP +K
Sbjct: 273 VFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNPIVIDQNYCPSHK 322
>gi|147783619|emb|CAN68140.1| hypothetical protein VITISV_035657 [Vitis vinifera]
gi|296084360|emb|CBI24748.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 171/387 (44%), Gaps = 75/387 (19%)
Query: 7 FSLLVS-FITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLV 65
F+ ++S F+T +N NV FGA + G TD ++AF +W A T+ V
Sbjct: 6 FTFIISLFLTPFIFTTPSNAAYNVVSFGAKSGGQTDSTQAFLKAWAAACR-STTASTIYV 64
Query: 66 PPGKYLVSFAEFEGPCKASISFQLQGLL---DLFSIDTS-----------LSLAKGTFHG 111
P G +LV A F GPCK++I + G + D S+ S +++ GT
Sbjct: 65 PKGSFLVKAAVFRGPCKSTIKIMIDGTIVAPDYRSMGNSGYWILFIDVDKVAIFGGTLDA 124
Query: 112 QGETAWPLNQCHKNSDCQL-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
+G W + K+ C + I FN+ N+ ++G+ S++S+ H+ I C N+ + ++
Sbjct: 125 KGAAYWACRRSGKS--CPIGARSITFNWANNIVVSGLTSINSQLSHLVINSCKNVAVRNV 182
Query: 171 KITA----------HADSS-----------------------KDILVSEVFCGPGQGISV 197
KI A H S +++ + + CGPG GIS+
Sbjct: 183 KIIAPDQSPNTDGIHVQGSTGVTITGSTIGTGDDCISIGPGTRNLWMEHIKCGPGHGISI 242
Query: 198 GSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIV 257
GSLGK K++ V +T+ N F + NGVR+K+W +N F +IVM V+ PI+
Sbjct: 243 GSLGKDKKEDGVQNVTLTNSVFIGSDNGVRIKSWARPSNSFVTNIVFRNIVMTRVQYPII 302
Query: 258 IDQLYCPYNK-C---------------NIKPKDSMPNIEIGN-------RNLVYNGVNVK 294
+DQ YCP N+ C NIK I N R + +N+
Sbjct: 303 VDQNYCPNNQGCPNQSSGVKVSQVTYRNIKGTSRSQAAMIFNCSSSNPCRGIRLQDINLT 362
Query: 295 VEGPETTSLCSNVKPTLFGKQIPATCV 321
TS C NV T G +P +CV
Sbjct: 363 YMNKAATSTCRNVHGTRSGVVVPRSCV 389
>gi|449453421|ref|XP_004144456.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 399
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 141/290 (48%), Gaps = 51/290 (17%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASISF 87
NV +FGA DG TD ++AF T W A T+ VP G+Y + F GPCK + F
Sbjct: 34 NVVNFGAKGDGRTDSTQAFQTVWSNACA-STKPTTIYVPRGRYYLRSGTFNGPCKNNAIF 92
Query: 88 -QLQGLL----DLFSIDTS-----------LSLAKGTFHGQGETAWPLNQCHKNSDC-QL 130
++ G L D I S ++++ G G+G W ++ C
Sbjct: 93 IRIDGTLVAPSDFQVIGNSAAWVVFRHVDGVTISGGNLDGKGVGLWTCKNSSISTTCPSG 152
Query: 131 PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------ 178
T ++F+ + ++ + S++S+ FHI I GC N+ + LK+ A +S
Sbjct: 153 ATTLQFSNSKNVVVSALTSLNSQMFHIVIHGCQNVMMKGLKVLASGNSPNTDGIHVQMST 212
Query: 179 ---------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNC 217
+ ++ + + CGPG GIS+GSL K ++++ V +TV+N
Sbjct: 213 DVAILNSKIGTGDDCISIGPGTSNLRIENIICGPGHGISIGSLAKDLQEDGVQNVTVKNV 272
Query: 218 TFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
F+ T NGVR+K W G A N F+ IVM+NV+NPIVIDQ YCP +K
Sbjct: 273 VFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNPIVIDQNYCPSHK 322
>gi|359478302|ref|XP_002275740.2| PREDICTED: polygalacturonase [Vitis vinifera]
Length = 469
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 171/387 (44%), Gaps = 75/387 (19%)
Query: 7 FSLLVS-FITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLV 65
F+ ++S F+T +N NV FGA + G TD ++AF +W A T+ V
Sbjct: 86 FTFIISLFLTPFIFTTPSNAAYNVVSFGAKSGGQTDSTQAFLKAWAAACR-STTASTIYV 144
Query: 66 PPGKYLVSFAEFEGPCKASISFQLQGLL---DLFSIDTS-----------LSLAKGTFHG 111
P G +LV A F GPCK++I + G + D S+ S +++ GT
Sbjct: 145 PKGSFLVKAAVFRGPCKSTIKIMIDGTIVAPDYRSMGNSGYWILFIDVDKVAIFGGTLDA 204
Query: 112 QGETAWPLNQCHKNSDCQL-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
+G W + K+ C + I FN+ N+ ++G+ S++S+ H+ I C N+ + ++
Sbjct: 205 KGAAYWACRRSGKS--CPIGARSITFNWANNIVVSGLTSINSQLSHLVINSCKNVAVRNV 262
Query: 171 KITA----------HADSS-----------------------KDILVSEVFCGPGQGISV 197
KI A H S +++ + + CGPG GIS+
Sbjct: 263 KIIAPDQSPNTDGIHVQGSTGVTITGSTIGTGDDCISIGPGTRNLWMEHIKCGPGHGISI 322
Query: 198 GSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIV 257
GSLGK K++ V +T+ N F + NGVR+K+W +N F +IVM V+ PI+
Sbjct: 323 GSLGKDKKEDGVQNVTLTNSVFIGSDNGVRIKSWARPSNSFVTNIVFRNIVMTRVQYPII 382
Query: 258 IDQLYCPYNK-C---------------NIKPKDSMPNIEIGN-------RNLVYNGVNVK 294
+DQ YCP N+ C NIK I N R + +N+
Sbjct: 383 VDQNYCPNNQGCPNQSSGVKVSQVTYRNIKGTSRSQAAMIFNCSSSNPCRGIRLQDINLT 442
Query: 295 VEGPETTSLCSNVKPTLFGKQIPATCV 321
TS C NV T G +P +CV
Sbjct: 443 YMNKAATSTCRNVHGTRSGVVVPRSCV 469
>gi|54291430|dbj|BAD62225.1| putative Exopolygalacturonase precursor [Oryza sativa Japonica
Group]
Length = 425
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 153/325 (47%), Gaps = 70/325 (21%)
Query: 44 KAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCK---ASISFQLQGLLD------ 94
KAF +WR A T+L+P G + VS EF GPCK + ++ + G+L
Sbjct: 52 KAFLAAWRAACGSAAGNATLLIPEGTFAVSTVEFSGPCKNGRSPLAVVVDGVLHPCAGGC 111
Query: 95 -----------LFS-IDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDS 142
FS + L GT G+G N K+ + T + + + ++
Sbjct: 112 HRKSGDDDVWITFSGVSNLLVTGAGTLDGRGGEHGHSNGGGKS---KTTTTLELDSVANA 168
Query: 143 TITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------------------ 178
T+ G++ ++SR FH+N+ ++ L+I A A S
Sbjct: 169 TVRGLRFLNSRGFHLNLHRSSHVAAERLRIEAPAASRNTDGIHVGLSSHVTVADSLVGTG 228
Query: 179 ---------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVK 229
S ++++ V CGPG GISVGSLG+ + +V GL VRNCT T+NG+R+K
Sbjct: 229 DDCVSIGPGSSGVVIAGVACGPGHGISVGSLGREEGEGDVRGLVVRNCTVVGTTNGLRIK 288
Query: 230 TWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNIEIGNRNLVYN 289
TWP S A N TF DIVM+NV NPI+IDQ YCP+ C+ K S+ I ++ Y
Sbjct: 289 TWPGSPPSRAFNITFRDIVMSNVSNPIIIDQHYCPHAHCSDIAKPSLVQIS----DVTYE 344
Query: 290 GVNVKVEGPETTS-----LCSNVKP 309
++EG ++ LCS +P
Sbjct: 345 ----RIEGTSSSRVAVQLLCSEDRP 365
>gi|7019679|emb|CAB75804.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 383
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/294 (34%), Positives = 143/294 (48%), Gaps = 59/294 (20%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKG-TVLVPPGKYLVSFAEFEGP-CK 82
+ N+ +GA DG TD +KAF W +A +K T+LVP G++L+ F+G CK
Sbjct: 21 QTYNILSYGAKPDGKTDSTKAFTVLWAKAC--ASVKPVTILVPKGRFLLRSIIFDGSKCK 78
Query: 83 -ASISFQLQGLLD---------------LFSIDTSLSLAKGTFHGQGETAWPLNQCHKNS 126
S++F++QG L LF +S+ G QG + W + KN
Sbjct: 79 RKSVTFRIQGTLVAPSDYRVIGKENYWILFQHLDGISVYGGVLDAQGASLWSCKKSGKN- 137
Query: 127 DCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HA 176
P + I+G+ S++S+ FH+ I GC N+KL+ +K++A H
Sbjct: 138 -----CPSGATSSRNVVISGLTSLNSQMFHVAINGCSNVKLDGVKVSADGNSPNTDGIHV 192
Query: 177 DSSKDI-----------------------LVSEVFCGPGQGISVGSLGKGIKDEEVVGLT 213
SS + + V CGPG GIS+GSLGK + V +T
Sbjct: 193 QSSSTVSILNSKISTGDDCVSIGPGTNGLWIENVACGPGHGISIGSLGKESVEVGVQNIT 252
Query: 214 VRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
V+ TFT T NGVR+K+W G A N F+ VMNNV+NPIVIDQ YCP N+
Sbjct: 253 VKTATFTGTENGVRIKSWARPSNGFAKNIRFQHCVMNNVQNPIVIDQNYCPGNE 306
>gi|10185719|gb|AAG14416.1|AF248538_1 NTS1 protein [Nicotiana tabacum]
Length = 401
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 147/302 (48%), Gaps = 54/302 (17%)
Query: 16 SVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFA 75
S RG+ T V +V FGA + D ++ +WR A G V++PPG Y
Sbjct: 28 SRRGLVET--VFDVTRFGARPNTPADSTRGLMMAWRSACQSPG-PAKVVIPPGTYTTGET 84
Query: 76 EFEGPCKAS--ISFQLQGLL---------------DLFSIDTSLSLAKGTFHGQGETAWP 118
F+GPC + I+ ++QG L + +D + GT +GQG+++W
Sbjct: 85 IFQGPCTSPRPITIEIQGTLLSNTDMSLYTRAAWISIEHVDGIVITGGGTLNGQGKSSWQ 144
Query: 119 LNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS 178
S LP+ + F + S+I + VD++ H+ I ++ ++++KITA DS
Sbjct: 145 FAD-KSGSTPPLPSSLVFQTVRSSSIKNLNFVDAKGVHLKITDSSDISVSNIKITAPGDS 203
Query: 179 ---------------------------------SKDILVSEVFCGPGQGISVGSLGKGIK 205
+ ++ +S + CGPG GIS+GSLGK +
Sbjct: 204 PNTDGLHISDTINVNVTDSTIGTGDDCISIGDGNSNVYISNINCGPGHGISIGSLGKRLD 263
Query: 206 DEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPY 265
+ +V G+TVRNCTF T+NG R+KT+ S S +EDI+++NV+NPIVIDQ Y
Sbjct: 264 ETDVKGVTVRNCTFRGTTNGARIKTYMGSPSLQVSGVVYEDIILDNVKNPIVIDQHYHSK 323
Query: 266 NK 267
N+
Sbjct: 324 NR 325
>gi|297824381|ref|XP_002880073.1| hypothetical protein ARALYDRAFT_903792 [Arabidopsis lyrata subsp.
lyrata]
gi|297325912|gb|EFH56332.1| hypothetical protein ARALYDRAFT_903792 [Arabidopsis lyrata subsp.
lyrata]
Length = 393
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 138/287 (48%), Gaps = 52/287 (18%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
NV+ +GA DG TD +K+F T+W A + V VP G YLV F GPCK I+
Sbjct: 30 FNVQRYGARGDGRTDATKSFLTAWSLACG-SRARAMVYVPRGTYLVKNLVFWGPCKNIIT 88
Query: 87 FQLQGLLD---------------LFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDC-QL 130
F+ G L LF+ +S+ GT +G W + K S C Q
Sbjct: 89 FKNDGTLVAPANYWDIGNSGYWILFAKVNRISVYGGTIDARGAGYWSCRK--KGSHCPQG 146
Query: 131 PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------ 178
I F++ N+ ++G+ S +S+ H+ + N+++ +++I A + S
Sbjct: 147 ARSISFSWCNNVLLSGLTSFNSQNMHVTVHHSSNVRIQNIRIRAPSGSPNTDGIHIQSSS 206
Query: 179 ---------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNC 217
S+++ + V CGPG GIS+GSLG +E V +TV +
Sbjct: 207 GVTISGGTIATGDDCIALSQGSRNVWIERVNCGPGHGISIGSLGDYANEEGVQNVTVTSS 266
Query: 218 TFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
FT T NGVR+KTW G +N F +++MNNV NP++IDQ YCP
Sbjct: 267 VFTKTQNGVRIKTWARPSRGFVNNVVFRNLIMNNVGNPVIIDQNYCP 313
>gi|255576410|ref|XP_002529097.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223531448|gb|EEF33281.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 388
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/312 (30%), Positives = 149/312 (47%), Gaps = 54/312 (17%)
Query: 3 LAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGT 62
LA F+L FI + NV +FGA DG TD ++ F +W A N T
Sbjct: 5 LAISFALSFFFIFHFSNAAS----YNVLNFGAKPDGKTDSTQPFLKTWAAACN-SPTAST 59
Query: 63 VLVPPGKYLVSFAEFEGPCKASISFQLQGLL---------------DLFSIDTSLSLAKG 107
V VP G+YL+ EF GPCK I+ ++ G + LF+ +++ G
Sbjct: 60 VYVPKGRYLIKAIEFRGPCKRRITVKIDGSIVAPMDYRALGNSGYWILFAKVNQIAVFGG 119
Query: 108 TFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 167
T +G W K+ + I F++ ND I+G++S++S+ H+ I N+++
Sbjct: 120 TLDAKGAAFWACRASGKSCPVGARS-ITFDWTNDVIISGLRSINSQTMHLVINNSNNVQV 178
Query: 168 NDLKITA----------HADSS-----------------------KDILVSEVFCGPGQG 194
++K+ A H +S K++L+S + CGPG G
Sbjct: 179 RNVKLIAPDQSPNTDGIHVQTSTGVTITGSTLQTGDDCVSIGPGTKNLLMSHIKCGPGHG 238
Query: 195 ISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVEN 254
IS+GSLG+ ++ V +T+ + F + NGVR+KTW N F++I+M NV+N
Sbjct: 239 ISIGSLGREYDEDGVQNITLTDAVFIGSDNGVRIKTWARPSTSFVRNVLFQNIIMMNVKN 298
Query: 255 PIVIDQLYCPYN 266
PI+IDQ YCP N
Sbjct: 299 PIIIDQDYCPDN 310
>gi|307135900|gb|ADN33764.1| polygalacturonase [Cucumis melo subsp. melo]
Length = 329
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 139/290 (47%), Gaps = 51/290 (17%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASISF 87
NV FG DG TD ++AF T W A + T+ VP G+Y + F GPCK + F
Sbjct: 35 NVVSFGGKGDGRTDSTQAFQTVWSNACS-STKPATIYVPRGRYYLRSGTFNGPCKNNAIF 93
Query: 88 -QLQGLL----DLFSIDTS-----------LSLAKGTFHGQGETAWPLNQCHKNSDC-QL 130
++ G L D I S ++++ G G+G W ++ C
Sbjct: 94 IRIDGTLVAPSDFQVIGNSPAWIAFRNVDGVTVSGGNLDGKGAGLWACKNSSSSTTCPSG 153
Query: 131 PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------ 178
T ++F+ + ++ + S++S+ FHI I GC N+ + +K+ A +S
Sbjct: 154 ATTLQFSNSKNVVVSALTSLNSQMFHIVINGCQNVTMRGIKVLASGNSPNTDGIHGQMSS 213
Query: 179 ---------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNC 217
+ ++ + + CGPG GIS+GSL K +++E V +TV+N
Sbjct: 214 NVAVLNSKIGTGDDCISIGPGTSNLRIENIVCGPGHGISIGSLAKDLQEEGVQNVTVKNV 273
Query: 218 TFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
F+ T NGVR+K W G A F+ IVM+NV+NPIVIDQ YCP +K
Sbjct: 274 VFSRTQNGVRIKAWGKPSNGFARKILFQHIVMDNVQNPIVIDQNYCPRHK 323
>gi|224117898|ref|XP_002331659.1| predicted protein [Populus trichocarpa]
gi|222874055|gb|EEF11186.1| predicted protein [Populus trichocarpa]
Length = 389
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/290 (34%), Positives = 146/290 (50%), Gaps = 50/290 (17%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKA-SI 85
+V +GA DG TD +KAF +W +A G T+ VP G + + +F+GPCK +I
Sbjct: 24 FSVLSYGAKPDGKTDSTKAFAAAWSQACASTG-PATISVPKGSFSLRQVKFQGPCKNNAI 82
Query: 86 SFQLQGLLD---------------LFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQL 130
++ G L +F ++L+ GT GQG W K + +
Sbjct: 83 LVRIDGTLVAPSNYGVLGSAENFLIFEHVNGVTLSGGTLDGQGAGLWSCKNSGKGNCPRG 142
Query: 131 PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------ 178
T + F+ + ITG+ S++S+ FHI I GC N+KL +K++A +S
Sbjct: 143 ATSLEFSNSKNIAITGLASLNSQMFHIVINGCQNVKLQGVKVSADGNSPNTDGIHVQLST 202
Query: 179 ---------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNC 217
+ ++ + V CGPG GIS+GSLGK ++ V +TV+
Sbjct: 203 AVTILNSRIGTGDDCISIGPGTSNLWIENVACGPGHGISIGSLGKDSQEAGVRDVTVKTT 262
Query: 218 TFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
TFT T NG+R+KTW G A+N F+ +VMNNV+NPI+IDQ YCP NK
Sbjct: 263 TFTGTENGLRIKTWGRPSNGFATNILFQHVVMNNVKNPILIDQNYCPGNK 312
>gi|125572932|gb|EAZ14447.1| hypothetical protein OsJ_04368 [Oryza sativa Japonica Group]
Length = 408
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 159/382 (41%), Gaps = 87/382 (22%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKA-S 84
V +V +GA DG +D ++ F +W +A TV VPPG+YL+ A F GPC + +
Sbjct: 28 VYSVVRYGARGDGASDSTRPFLRAWADACR-SPRPATVYVPPGRYLLGRATFVGPCSSRA 86
Query: 85 ISFQLQGLLDL----------------FSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDC 128
++F G + F L+++ GT G+GE W + C
Sbjct: 87 VAFSTAGTVVAPAGYAWDGATAGQWITFESVVGLTVSGGTLDGRGEALWACKKQQPRGHC 146
Query: 129 QL-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--------- 178
+ + + + + G++SV S FH+ +L + + + + A ADS
Sbjct: 147 PTGASSLTISNARNVVVEGVRSVSSELFHVVVLQSRGVTVRRVTVEAPADSPNTDGIHIH 206
Query: 179 ------------------------SKDILVSEVFCGPGQGISVGSLGK--GIKDEEVVGL 212
+ ++ + V CGPG GIS+GSLGK G+ E V +
Sbjct: 207 KSTNVAVYDAAIRTGDDCVSVGPGNSNLWIERVACGPGHGISIGSLGKQQGMAVEAVQNV 266
Query: 213 TVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKP 272
TV+ FT T+NG+R+KTW +S G TF D M V NPI+IDQ YCP C
Sbjct: 267 TVKTTWFTGTTNGLRIKTWGNSKRGFVRGVTFSDSTMAGVGNPIIIDQHYCPDGGCGGAA 326
Query: 273 KDSMPNIEI-----------------------------GNR----NLVYNGVNVKVEGPE 299
+ S I+I G R L Y G + +++
Sbjct: 327 RGSSSGIKISEVEYADVRGSSATPVAVSFDCSRSNPCSGIRLRDVRLTYQGKSGRLQAAG 386
Query: 300 TTSLCSNVKPTLFGKQIPATCV 321
S C N + T G +P +C+
Sbjct: 387 AVSSCRNAQGTASGLVVPPSCL 408
>gi|426204267|gb|AFY12690.1| polygalacturonase 11c, partial [Medicago ruthenica]
Length = 238
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 115/231 (49%), Gaps = 37/231 (16%)
Query: 78 EGPCKASISFQLQGLLDLFSIDTSLSLAKGTFHGQGETAWPLNQCH---KNSDCQLPTPI 134
+ P + + + +D KG F GQG T + K S ++
Sbjct: 8 QAPADPGVIKGTEQWVKFLYMDHLTLSGKGVFDGQGATVYKQGGAAWNGKKSSNKVFMNF 67
Query: 135 RFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---------------- 178
FNF+N+S + I S DS+ FH+ +LGC N + ITA DS
Sbjct: 68 GFNFVNNSIVRDITSKDSKNFHVMVLGCNNFTFDGFTITAPGDSPNTDGIHMGRSTDVKI 127
Query: 179 -----------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTC 221
SK I V V CGPG GISVGSLGK ++ V G+TV+NCT T
Sbjct: 128 LNTNIGTGDDCVSLGDGSKQITVQNVNCGPGHGISVGSLGKFTTEQNVEGVTVKNCTLTA 187
Query: 222 TSNGVRVKTWPDSHIGIA-SNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK 271
T NGVR+KTWPD+ I S+ FEDI M NV+NP++IDQ YCP+N+C+ K
Sbjct: 188 TDNGVRIKTWPDAPGTITVSDIHFEDITMTNVKNPVIIDQEYCPWNQCSKK 238
>gi|224117798|ref|XP_002331634.1| predicted protein [Populus trichocarpa]
gi|222874030|gb|EEF11161.1| predicted protein [Populus trichocarpa]
Length = 390
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 158/339 (46%), Gaps = 58/339 (17%)
Query: 21 DATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGP 80
+A + NV FGA DG TD ++ F +W A T+ VP G+YL+ F GP
Sbjct: 21 NAASASYNVIKFGAKPDGKTDSTQPFLKAWSAACG-SASPSTINVPKGRYLLKATVFRGP 79
Query: 81 CKASISFQLQGLL---------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKN 125
CK I+ Q+ G L LF +S+ GT +G W + +N
Sbjct: 80 CKNKITVQIDGTLVAPTDYRALGNSGYWILFIKVNRVSVFGGTLDAKGAGFWACRKSGQN 139
Query: 126 SDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------H 175
+ I FN+ ND I+G+ S++S+ H+ I C N+ + ++++ A H
Sbjct: 140 CPVGARS-ITFNWANDILISGLTSINSQSMHLVINSCNNVLVRNVRVIAPDQSPNTDGIH 198
Query: 176 AD-----------------------SSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGL 212
S++++L+S + CGPG GIS+GSLGK + V +
Sbjct: 199 VQTSTGVTITGSTLQTGDDCISIGPSTRNMLMSSIKCGPGHGISIGSLGKDFNEGGVENI 258
Query: 213 TVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK-CNIK 271
T+ N F+ + NGVR+K+W G N F++++M NV NPI++DQ YCP N+ C
Sbjct: 259 TLTNSIFSGSDNGVRIKSWARPSNGFVRNVVFQNLIMKNVRNPIIVDQNYCPNNQGC--- 315
Query: 272 PKDSMPNIEIGNRNLVYNGVNVKVEGPETTSL-CSNVKP 309
P+ S ++I + Y + PE + CS+ P
Sbjct: 316 PRQS-SGVKI--SQVTYRNIQGTSASPEAVTFDCSSSNP 351
>gi|24475517|dbj|BAC22688.1| polygalacturonase [Pyrus communis]
gi|82949281|dbj|BAE53368.1| polygalacturonase-1 [Pyrus communis]
Length = 460
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 159/342 (46%), Gaps = 62/342 (18%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPC 81
A + ++V DFGA +G DD++AF +W+ A + G ++VP KYLV +F GPC
Sbjct: 94 APAKTISVDDFGAKGNG-ADDTQAFVKAWKAACSSSGAI-VLVVPQKKYLVRPIDFSGPC 151
Query: 82 KASISFQLQGLLD---------------LF-SIDTSLSLAKGTFHGQGETAWPLNQCHKN 125
K+ ++ Q+ G ++ +F ++ L + GT +G G W N C +
Sbjct: 152 KSQLTVQIYGTIEASEDRSIYKDIDHWLIFDNVQNLLVVGPGTINGSGNIWWK-NSCKRK 210
Query: 126 SD----CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--- 178
PT + FN N+ + +K D++ H+ C N++ + L +TA DS
Sbjct: 211 PQPPCGTHAPTAVTFNRCNNLVVKNLKIQDAQQMHVRFQNCINVQASRLTVTAPEDSPNT 270
Query: 179 ------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEE 208
S+ + +++ CGPG GIS+GSLG+ +
Sbjct: 271 DGIHVTNTQNITISSSVIGTGDDCISIVSGSQRVQATDITCGPGHGISIGSLGEDGSKDH 330
Query: 209 VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
V G+ V + TSNG+R+KTW G A+N F+++ MNNV NPI+IDQ YC +
Sbjct: 331 VSGVCVNGAKLSGTSNGLRIKTWQGGS-GSATNIVFQNVQMNNVTNPIIIDQNYCDHKTK 389
Query: 269 NIKPKDSMPNIEIGNRNLVYNGVN-VKVEGPETTSLCSNVKP 309
+ K + S + +N++Y + G T CS P
Sbjct: 390 DCKQQKSAVQV----KNVLYQNIRGTSASGDAITLNCSQSVP 427
>gi|115441547|ref|NP_001045053.1| Os01g0891100 [Oryza sativa Japonica Group]
gi|20161258|dbj|BAB90184.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113534584|dbj|BAF06967.1| Os01g0891100 [Oryza sativa Japonica Group]
gi|125528676|gb|EAY76790.1| hypothetical protein OsI_04747 [Oryza sativa Indica Group]
Length = 408
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 160/382 (41%), Gaps = 87/382 (22%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKA-S 84
V +V +GA DG +D ++ F +W +A TV VPPG+YL+ A F GPC + +
Sbjct: 28 VYSVVRYGARGDGASDSTRPFLRAWADACR-SPRPATVYVPPGRYLLGRATFVGPCSSRA 86
Query: 85 ISFQLQGLLDL----------------FSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDC 128
++F + G + F L+++ GT G+G+ W + C
Sbjct: 87 VAFSIAGTVVAPAGYAWDGATAGQWITFESVVGLTVSGGTLDGRGDALWACKKQQPRGHC 146
Query: 129 QL-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--------- 178
+ + + + + G++SV S FH+ +L + + + + A ADS
Sbjct: 147 PTGASSLTISNARNVVVEGVRSVSSELFHVVVLQSRGVTVRRVTVEAPADSPNTDGIHIH 206
Query: 179 ------------------------SKDILVSEVFCGPGQGISVGSLGK--GIKDEEVVGL 212
+ ++ + V CGPG GIS+GSLGK G+ E V +
Sbjct: 207 KSTNVAVYDAAIRTGDDCVSVGPGNSNLWIERVACGPGHGISIGSLGKQQGMAVEAVQNV 266
Query: 213 TVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKP 272
TV+ FT T+NG+R+KTW +S G TF D M V NPI+IDQ YCP C
Sbjct: 267 TVKTTWFTGTTNGLRIKTWGNSKRGFVRGVTFSDSTMAGVGNPIIIDQHYCPDGGCGGAA 326
Query: 273 KDSMPNIEI-----------------------------GNR----NLVYNGVNVKVEGPE 299
+ S I+I G R L Y G + +++
Sbjct: 327 RGSSSGIKISEVEYADVRGSSATPVAVSFDCSRSNPCSGIRLRDVRLTYQGKSGRLQAAG 386
Query: 300 TTSLCSNVKPTLFGKQIPATCV 321
S C N + T G +P +C+
Sbjct: 387 AVSSCRNAQGTASGLVVPPSCL 408
>gi|426204259|gb|AFY12686.1| polygalacturonase 11c, partial [Medicago sauvagei]
Length = 240
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/233 (37%), Positives = 115/233 (49%), Gaps = 39/233 (16%)
Query: 78 EGPCKASISFQLQGLLDLFSIDTSLSLAKGTFHGQGETAWPLNQ-----CHKNSDCQLPT 132
+ P + + + +D KG F GQG T + K S+ ++
Sbjct: 8 QAPADPGVIKGTEQWVKFLYMDHLTLSGKGVFDGQGATVYKQAAPAAAWSGKKSNSKVFM 67
Query: 133 PIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-------------- 178
FNF+N+S + I S DS+ FH+ +LGC N + ITA DS
Sbjct: 68 NFGFNFVNNSIVRDITSKDSKNFHVMVLGCNNFTFDGFTITAPGDSPNTDGIHMGRSTDV 127
Query: 179 -------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTF 219
SK I V V CGPG GISVGSLGK ++ V G+TV+NCT
Sbjct: 128 KILNTNIGTGDDCXXLGDGSKQITVQNVHCGPGHGISVGSLGKFTTEQNVEGVTVKNCTL 187
Query: 220 TCTSNGVRVKTWPDSHIGIA-SNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK 271
T T NGVR+ TWPD+ I S+ FEDI M NV+NPI+IDQ YCP+N+C+ K
Sbjct: 188 TATDNGVRINTWPDAPGTITVSDIHFEDITMTNVKNPIIIDQEYCPWNQCSKK 240
>gi|350537727|ref|NP_001233795.1| polygalacturonase precursor [Solanum lycopersicum]
gi|924650|gb|AAA80489.1| polygalacturonase precursor [Solanum lycopersicum]
Length = 392
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 174/390 (44%), Gaps = 78/390 (20%)
Query: 5 ARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVL 64
A F LL+ + + A + NV+++GA +DG TD SKAF +W A + T+
Sbjct: 5 AIFFLLLIY----SSLAANTNIYNVQNYGAKSDGKTDSSKAFLNAWAAACASNK-PSTIN 59
Query: 65 VPPGKYLVSFAEFEGP-CKA-SISFQLQGLLDL---------------FSIDTSLSLAKG 107
VP GKYL+ A F G CK+ +I+ + G L F LS+ G
Sbjct: 60 VPIGKYLIHNANFNGQTCKSKAITMHIDGTLLAPSDYNVIGNEENWIKFEKVNGLSIYGG 119
Query: 108 TFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 167
TF GQ W + + T + F N+ ++G+K +S+ F I + GC+N+KL
Sbjct: 120 TFDGQAAALWACKNSNNKNCPDGTTALTFYNSNNIIMSGVKVQNSQKFQILVDGCHNVKL 179
Query: 168 NDLKITA----------HADSS-----------------------KDILVSEVFCGPGQG 194
+K++A H SS ++ + + CGPG G
Sbjct: 180 QGVKVSAPGNSPNTDGIHVKSSSGVSIMKSQIGTGDDCISIGPGTSNLWIEGIACGPGHG 239
Query: 195 ISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVEN 254
IS+GSLG ++ V +TV+ TF+ T+NGVRVKTW G N F+ IVM NV+N
Sbjct: 240 ISIGSLGWKQQELGVQNVTVKTVTFSGTTNGVRVKTWARPSNGFVRNVLFQHIVMVNVKN 299
Query: 255 PIVIDQLYCP-YNKC-----NIKPKD-------SMPNIEIGNR----------NLVYNGV 291
PI+IDQ YCP + C IK D E+ + + V
Sbjct: 300 PIIIDQNYCPNHQSCPHKGSGIKISDVTYQDIHGTSATEVAVKLDCSKSNPCSGITLEDV 359
Query: 292 NVKVEGPETTSLCSNVKPTLFGKQIPATCV 321
N+ + +T + C N + + G Q P C+
Sbjct: 360 NLSYQNQQTEASCVNARGRVSGLQKPTNCL 389
>gi|399764476|gb|AFP50438.1| polygalacturonase 11a, partial [Medicago littoralis]
gi|399764478|gb|AFP50439.1| polygalacturonase 11a, partial [Medicago littoralis]
Length = 240
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 115/233 (49%), Gaps = 39/233 (16%)
Query: 78 EGPCKASISFQLQGLLDLFSIDTSLSLAKGTFHGQGETAWPLNQ-----CHKNSDCQLPT 132
+ P S+ + +D KG F GQG + + Q K + +
Sbjct: 8 QAPADPSVIKGTEQWFKFLYMDHLTLSGKGVFDGQGASVYKKAQPAAAWSGKGGNSKNFM 67
Query: 133 PIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-------------- 178
FNF+N+S + G+ S DS+ FH+ + GC N+ + ITA DS
Sbjct: 68 NFGFNFVNNSLVHGVTSKDSKNFHVMVFGCNNITFDSFTITAPGDSPNTDGIHMGKSTGV 127
Query: 179 -------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTF 219
SK I V V CGPG G+SVGSLGK +E V G+T++NCT
Sbjct: 128 KILNTNIGTGDDCVSIGDGSKQITVEGVKCGPGHGLSVGSLGKFTTEENVEGITIKNCTL 187
Query: 220 TCTSNGVRVKTWPDSHIGIA-SNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK 271
T T NGVR+KTWPD+ I S+ FEDI M NV+NP++IDQ YCP+N C+ K
Sbjct: 188 TATDNGVRIKTWPDAPGTITVSDIHFEDITMTNVKNPVIIDQEYCPWNACSKK 240
>gi|359485799|ref|XP_003633336.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Vitis
vinifera]
Length = 275
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/268 (36%), Positives = 132/268 (49%), Gaps = 56/268 (20%)
Query: 24 NRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKA 83
+ + +V +GA AD + S+A +W +A + + TV++P G Y + GPCKA
Sbjct: 25 DTIFDVTKYGAKADENINISQALLKAWGDACS-SPVSSTVMIPDGTYALGQITIXGPCKA 83
Query: 84 SISFQL-QGLLDLFS---IDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFL 139
IS L + +D + ID G F+GQG+ +RFNF+
Sbjct: 84 PISISLFKAEVDWITFEQIDQFTLSGGGVFYGQGKN------------------LRFNFI 125
Query: 140 NDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--------------------- 178
+S + I S S+ FHIN+LGC N ++ I+A +S
Sbjct: 126 TNSMVKDITSRYSKRFHINLLGCKNSTFYNVAISALEESLNTDGIHIGRSSGINITDSTI 185
Query: 179 ------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGV 226
S+ I + V GPG GISVGSLGK +E VVG++V+NCT T T NGV
Sbjct: 186 ETGDDCVSIGADSEQINIQRVTYGPGHGISVGSLGKYPHEEPVVGISVKNCTXTNTQNGV 245
Query: 227 RVKTWPDSHIGIASNFTFEDIVMNNVEN 254
RVKTWP SH G AS FEDIVMNN+ N
Sbjct: 246 RVKTWPTSHQGTASEMHFEDIVMNNIPN 273
>gi|2459811|gb|AAC28903.1| polygalacturonase 1 [Solanum lycopersicum]
Length = 392
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 168/375 (44%), Gaps = 74/375 (19%)
Query: 20 IDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEG 79
+ A + NV+++GA +DG TD SKAF +W A + T+ VP GKYL+ A F G
Sbjct: 16 LAANTNIYNVQNYGAKSDGKTDSSKAFLNAWAAACASNK-PSTINVPIGKYLIHNANFNG 74
Query: 80 P-CKA-SISFQLQGLLDL---------------FSIDTSLSLAKGTFHGQGETAWPLNQC 122
CK+ +I+ + G L F LS+ GTF GQ W
Sbjct: 75 QTCKSKAITMHIDGTLLAPSDYNVIGNEENWIKFEKVNGLSIYGGTFDGQAAALWACKNS 134
Query: 123 HKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA-------- 174
+ + T + F N+ ++G+K +S+ F I + GC+N+KL +K++A
Sbjct: 135 NNKNCPDGTTALTFYNSNNIIMSGVKVQNSQKFQILVDGCHNVKLQGVKVSAPGNSPNTD 194
Query: 175 --HADSS-----------------------KDILVSEVFCGPGQGISVGSLGKGIKDEEV 209
H SS ++ + + CGPG GIS+GSLG ++ V
Sbjct: 195 GIHVKSSSGVSIMKSQIGTGDDCISIGPGTSNLWIEGIACGPGHGISIGSLGWKQQELGV 254
Query: 210 VGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP-YNKC 268
+TV+ TF+ T+NGVRVKTW G N F+ IVM NV+NPI+IDQ YCP + C
Sbjct: 255 QNVTVKTVTFSGTTNGVRVKTWARPSNGFVRNVLFQHIVMVNVKNPIIIDQNYCPNHQSC 314
Query: 269 -----NIKPKD-------SMPNIEIGNR----------NLVYNGVNVKVEGPETTSLCSN 306
IK D E+ + + VN+ + +T + C N
Sbjct: 315 PHKGSGIKISDVTYQDIHGTSATEVAVKLDCSKSNPCSGITLEDVNLSYQNQQTEASCVN 374
Query: 307 VKPTLFGKQIPATCV 321
+ + G Q P C+
Sbjct: 375 ARGRVSGLQKPTNCL 389
>gi|224092830|ref|XP_002309713.1| predicted protein [Populus trichocarpa]
gi|222852616|gb|EEE90163.1| predicted protein [Populus trichocarpa]
Length = 390
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 145/307 (47%), Gaps = 50/307 (16%)
Query: 9 LLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG 68
+++SF S +A + NV FGA DG TD ++ F +W A T+ VP G
Sbjct: 9 VVLSFFYSFHLSNAASTTHNVIKFGAKPDGKTDATQPFLKAWSAACR-SATPSTIYVPKG 67
Query: 69 KYLVSFAEFEGPCKASISFQLQGLL---------------DLFSIDTSLSLAKGTFHGQG 113
+YL+ F GPCK I+ Q+ G L LF +S+ GT +G
Sbjct: 68 RYLLKAIVFRGPCKNKITVQIGGTLIAPTDYRALGNSGYWILFIETNRVSVFGGTLDAKG 127
Query: 114 ETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKIT 173
W + +N + I FN+ ND I+G+ S++S+ H+ I C + + +++
Sbjct: 128 AGFWACRKSRQNCPVGAAS-ITFNWANDILISGLTSINSQSTHLVINSCKKVVVRNVRTI 186
Query: 174 A----------HADSS-----------------------KDILVSEVFCGPGQGISVGSL 200
A H +S +++L+S + CGPG GIS+GSL
Sbjct: 187 APDQSPNTDGIHVQASTGVSITGSTLQTGDDCISIGPGTRNMLMSGIKCGPGHGISIGSL 246
Query: 201 GKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQ 260
GK ++ V + V N F+ + NGVR+K+W G +++++M NV+NPI+IDQ
Sbjct: 247 GKEFNEDGVENIMVTNSVFSGSDNGVRIKSWARPSNGFVRKVVYKNLIMKNVQNPIIIDQ 306
Query: 261 LYCPYNK 267
YCP NK
Sbjct: 307 NYCPDNK 313
>gi|255551843|ref|XP_002516967.1| Exopolygalacturonase clone GBGE184 precursor, putative [Ricinus
communis]
gi|223544055|gb|EEF45581.1| Exopolygalacturonase clone GBGE184 precursor, putative [Ricinus
communis]
Length = 412
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 138/287 (48%), Gaps = 53/287 (18%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCK-- 82
+V NV FGA D D++ AF +W+ NW G ++VP G++L S F+GPCK
Sbjct: 50 KVFNVLQFGAKHDPRKDNALAFIQAWKATCNWAG-NARLVVPGGEFLASSMVFQGPCKNP 108
Query: 83 ---ASISFQLQGLLDL--FSIDTSLSLAK---------GTFHGQGETAWPLNQCHKNSDC 128
I ++ + DL ++ D +S K GT GQG+ W N
Sbjct: 109 APIVQIIGTIKAVSDLSNYAEDFWISFEKVNGLIVTGTGTVDGQGQNVWKYND---GGGS 165
Query: 129 QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---------- 178
P I+ +++ I I SV+ FHI I+ N++ L + A S
Sbjct: 166 IFPANIKLLHVSNGIIRQINSVNPMGFHIGIVLSQNIRARRLHLNAPESSPNTDGFHISQ 225
Query: 179 -----------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVR 215
S DI + +V CGPG GIS+GSLGK +++V G+ V
Sbjct: 226 SNQVKIAKSVIATGDDCVGMIHGSTDISIKKVTCGPGHGISIGSLGKYPDEKDVRGILVT 285
Query: 216 NCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLY 262
NCT T NG+R+KTW S +A++ TF+DI+M+NV +PI+IDQ Y
Sbjct: 286 NCTLKNTDNGIRIKTWGGSPPSVATSLTFQDIIMDNVRHPIIIDQSY 332
>gi|449466382|ref|XP_004150905.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
gi|449518881|ref|XP_004166464.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 400
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 141/299 (47%), Gaps = 58/299 (19%)
Query: 22 ATNRVLNVKDFGAVADGI-TDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGP 80
AT NV DFG + TD SKA +W A + T+ VP K+ V A F GP
Sbjct: 30 ATPLTFNVLDFGTKPNNAETDSSKALQLAWMHACS-SSKPATIYVPKAKFYVRSATFNGP 88
Query: 81 CKAS-ISFQLQGLL---------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHK 124
CK + I+ ++ G L LF +++ G GQG W K
Sbjct: 89 CKNNDITIRIDGTLVAPSDFRLTSNSENWILFHNVNGVTVIGGIIDGQGTQLWAC----K 144
Query: 125 NSDCQLP---TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--- 178
NS P T + F + + G+ S++S+ FHI + C N+K+ LK+ A ++S
Sbjct: 145 NSANTCPSGTTSLEFTNSQNILVNGLTSLNSQIFHIVVNQCRNVKMQGLKVFAASNSPNT 204
Query: 179 ------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEE 208
S ++ + V CGPG GIS+GSLGK +K++
Sbjct: 205 DGIHVGDSSHVTILNSNIRTGDDCISIGPGSSNLWIENVVCGPGHGISIGSLGKELKEKG 264
Query: 209 VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
V +TV++C F T NGVR+K+W G A + F+ + M NV+NPI+IDQ YCP+N+
Sbjct: 265 VQNVTVKSCKFMDTQNGVRIKSWGRQSSGFAKDIRFQHLTMTNVQNPIIIDQNYCPHNQ 323
>gi|399764480|gb|AFP50440.1| polygalacturonase 11a, partial [Medicago truncatula]
Length = 240
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 115/233 (49%), Gaps = 39/233 (16%)
Query: 78 EGPCKASISFQLQGLLDLFSIDTSLSLAKGTFHGQGETAWPLNQ-----CHKNSDCQLPT 132
+ P S+ + +D KG F GQG + + Q K + +
Sbjct: 8 QAPADPSVIKGTEQWFKFLYMDHLTLSGKGVFDGQGASVYKKAQPAAAWSGKGGNSKNFM 67
Query: 133 PIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-------------- 178
FNF+N+S + G+ S DS+ FH+ + GC N+ + ITA DS
Sbjct: 68 NFGFNFVNNSLVHGVTSKDSKNFHVMVFGCNNITFDSFTITAPGDSPNTDGIHMGKSTGV 127
Query: 179 -------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTF 219
SK I V V CGPG G+S+GSLGK +E V G+T++NCT
Sbjct: 128 KILNTNIGTGDDCVSIGDGSKQITVEGVKCGPGHGLSIGSLGKFTTEENVEGITIKNCTL 187
Query: 220 TCTSNGVRVKTWPDSHIGIA-SNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK 271
T T NGVR+KTWPD+ I S+ FEDI M NV+NP++IDQ YCP+N C+ K
Sbjct: 188 TATDNGVRIKTWPDAPGTITVSDIHFEDITMTNVKNPVIIDQEYCPWNACSKK 240
>gi|479088|emb|CAA54448.1| polygalacturonase [Prunus persica]
Length = 458
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 148/295 (50%), Gaps = 59/295 (20%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKA 83
+ ++V +FGA +G DD++AF+ +W+ A + +G VLV P K YLV EF GPCK+
Sbjct: 89 KTISVANFGAKGNG-ADDTRAFEKAWKAACSSNG--AIVLVVPQKTYLVRPIEFSGPCKS 145
Query: 84 SISFQLQGLLD---------------LF-SIDTSLSLAKGTFHGQGETAWPLNQCHKNSD 127
++ Q+ G ++ +F ++ + L + GT +G G W N C +
Sbjct: 146 HLTMQIYGTIEASDDRSVYKDVTHWLIFDNVQSLLVVGPGTINGNGNRWWE-NSCKRKPQ 204
Query: 128 --C--QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----- 178
C Q PT + FN N+ + +K D++ H+ C N++ + L +TA DS
Sbjct: 205 PPCNEQAPTAVTFNKCNNLVVKNLKIQDAQQMHVRFQNCKNVEASHLTVTAPEDSPNTDG 264
Query: 179 ----------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVV 210
S+ + +++ CGPG GIS+GSLG+ ++ V
Sbjct: 265 IHITNTKNITISSSVIGTGDDCISIVSGSQRVQATDITCGPGHGISIGSLGEDNANDHVS 324
Query: 211 GLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPY 265
G+ V + TSNGVR+KTW G ASN F+++ MN+V NPI+IDQ YC +
Sbjct: 325 GVFVNGAKISGTSNGVRIKTWQGGS-GSASNIVFQNVEMNDVTNPIIIDQNYCDH 378
>gi|356503157|ref|XP_003520378.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 391
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 103/316 (32%), Positives = 149/316 (47%), Gaps = 55/316 (17%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK 60
+LL A L +F +++ A LNV +FGA DG TD + AF ++W A +
Sbjct: 5 VLLHALVLFLFTFTSAI----AEAVTLNVVNFGAKPDGETDSTNAFVSAWGRACSSTA-P 59
Query: 61 GTVLVPPGKYLVSFAEFEGPCK-ASISFQLQGLLD--------------LFSIDT-SLSL 104
T+ VP G++LV F+G C I+ ++ G + LF D +S+
Sbjct: 60 TTIYVPLGRFLVGKVVFKGRCNNKGITIRIDGAMLAPSNYDVIGNGGNWLFFDDVDGVSI 119
Query: 105 AKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYN 164
G GQG W + K T + F N+ I G+ S++S+ FHI I C N
Sbjct: 120 IGGVLDGQGTGLWACKRSGKTCPTG-ATNLGFTNSNNIVINGVTSLNSQMFHIVIDRCNN 178
Query: 165 LKLNDLKITAHADS---------------------------------SKDILVSEVFCGP 191
+KL +K++A +S + ++ + + CGP
Sbjct: 179 VKLQGIKVSAAGNSPNTDGIHVQLSSTVTILNSNIATGDDCISIGPGTTNLWIENIACGP 238
Query: 192 GQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNN 251
G GISVGSLGK ++ V +TV+ TFT T NGVR+K+W G A N F+ M N
Sbjct: 239 GHGISVGSLGKEFQEPGVQNVTVKTMTFTGTENGVRIKSWGRPSNGFARNILFQHATMVN 298
Query: 252 VENPIVIDQLYCPYNK 267
V+NPIVIDQ YCP+ K
Sbjct: 299 VQNPIVIDQNYCPHEK 314
>gi|57899119|dbj|BAD86981.1| putative polygalacturonase PG1 [Oryza sativa Japonica Group]
Length = 410
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 150/340 (44%), Gaps = 67/340 (19%)
Query: 29 VKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKASISF 87
VKDFGA DG+TDD+ A T+W A DG G VL G+ +L+ F GPC+ S++
Sbjct: 21 VKDFGAAGDGVTDDTDALKTAWDTACADDG-AGVVLAAAGRSFLIHTTVFTGPCQGSVTL 79
Query: 88 QLQGL------------------LDLFSIDTSLSLAKGTFHGQGETAWPLN-QCHKNSD- 127
Q+ G L + D + G G+G+ W L + HK +
Sbjct: 80 QVDGTIVAPSEPATWPANNKRNWLVFYRADGVSLVGAGLIDGKGQKWWDLPCKPHKGGNT 139
Query: 128 ---CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA---------- 174
C P +RF N+ T+ G+K +S FH C ++++ L I++
Sbjct: 140 HGPCDSPVAMRFAISNNVTVRGLKVQNSPEFHFRFDNCNGVRVDGLSISSPALSPNTDGI 199
Query: 175 HADSSKDILVSE-----------------------VFCGPGQGISVGSLGKGIKDEEVVG 211
H +++ D+L++ V CGPG GIS+GSLGK V
Sbjct: 200 HVENTSDVLITNTVVSNGDDCVSIGAGTLNVHIENVTCGPGHGISIGSLGKAGTKACVAN 259
Query: 212 LTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK 271
+TVRN + NGVR+KTW G S FE++ M+ V NPI+IDQ YC C +
Sbjct: 260 VTVRNAVIRHSDNGVRIKTWQGGS-GSVSAVAFENVRMDAVRNPIIIDQYYCLSKSCENE 318
Query: 272 PKDSMPNIEIGNRNLVYNGVN--VKVEGPETTSLCSNVKP 309
N + Y+G+ V GP CS+ P
Sbjct: 319 TTAVFVN------GVSYSGIRGTYDVRGPPIHFGCSDAVP 352
>gi|426204248|gb|AFY12680.1| polygalacturonase 11c, partial [Medicago rigiduloides]
Length = 240
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 110/206 (53%), Gaps = 39/206 (18%)
Query: 105 AKGTFHGQGETAWPLNQ-----CHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINI 159
KG F GQG + K S+ ++ + F F+N+S + G+ S DS+ FH+ +
Sbjct: 35 GKGVFDGQGANVYKQATPAAAWSGKKSNVKIMMNLGFMFVNNSMVHGLTSKDSKNFHVMV 94
Query: 160 LGCYNLKLNDLKITAHADS---------------------------------SKDILVSE 186
LGC N + +TA DS S+ I +
Sbjct: 95 LGCNNFTFDGFTVTAPGDSPNTDGIHMGRSTDVKILNTNIATGDDCISLGDGSRKITIQG 154
Query: 187 VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIA-SNFTFE 245
V CGPG GISVGSLGK ++ V G+TV+NCT T T NGVR+KTWPD+ I S+ FE
Sbjct: 155 VKCGPGHGISVGSLGKYTTEDNVEGVTVKNCTLTSTLNGVRIKTWPDAPGTITVSDIHFE 214
Query: 246 DIVMNNVENPIVIDQLYCPYNKCNIK 271
DI+MNNV NPI+IDQ YCP+N+C+ K
Sbjct: 215 DIIMNNVMNPIIIDQEYCPWNQCSKK 240
>gi|100912|pir||S16998 polygalacturonase (EC 3.2.1.15) - maize
Length = 363
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 132/277 (47%), Gaps = 52/277 (18%)
Query: 43 SKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLL--------- 93
+KA +W A G K T+L+P G +LV F GPCK ++ Q+ G L
Sbjct: 10 TKAVQEAWASACGGTG-KQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQY 68
Query: 94 -------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTIT 145
++ +D + KG GQG W N C K DC+ LP + +F+N+ ++
Sbjct: 69 KDHGNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVS 128
Query: 146 GIKSVDSRYFHINILGCYNLKLNDLKITAHADS--------------------------- 178
G+ ++S++FH+N+ C ++ + D+ +TA DS
Sbjct: 129 GVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDC 188
Query: 179 ------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWP 232
+ + ++ V CGPG GIS+GSLG+ +++V + V++CT T GVR+K +
Sbjct: 189 ISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYE 248
Query: 233 D-SHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
D + + S +E+I M + NPI ID YCP C
Sbjct: 249 DAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLC 285
>gi|224117904|ref|XP_002331662.1| predicted protein [Populus trichocarpa]
gi|222874058|gb|EEF11189.1| predicted protein [Populus trichocarpa]
Length = 389
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/290 (33%), Positives = 145/290 (50%), Gaps = 50/290 (17%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKA-SI 85
+V +GA DG TD +KAF +W +A G T+ VP G + + +F+GPCK +I
Sbjct: 24 FSVLSYGAKPDGKTDSTKAFAAAWSQACASTG-PATISVPKGSFSLRQVKFQGPCKNNAI 82
Query: 86 SFQLQGLLD---------------LFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQL 130
++ G L +F ++L+ GT GQG W K + +
Sbjct: 83 LVRIDGTLVAPSNYGVLGSAENWLIFEHVNGVTLSGGTLDGQGAGLWSCKNSGKGNCPRG 142
Query: 131 PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------ 178
T + F+ + ITG+ S++S+ FHI I GC N+KL +K++A +S
Sbjct: 143 ATSLEFSNSKNIAITGLASLNSQMFHIVINGCQNVKLQGVKVSADGNSPNTDGIHVQLST 202
Query: 179 ---------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNC 217
+ ++ + V CGPG GIS+GSLGK ++ V +TV+
Sbjct: 203 AVTILNSRIGTGDDCISIGPGTSNLWIENVACGPGHGISIGSLGKESQEAGVRDVTVKTT 262
Query: 218 TFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
TFT T NG+R+KTW G A+N F+ +VMNNV+NPI+IDQ YCP K
Sbjct: 263 TFTGTENGLRIKTWGRPSNGFATNILFQHVVMNNVKNPILIDQNYCPGKK 312
>gi|359478229|ref|XP_002279845.2| PREDICTED: polygalacturonase-like [Vitis vinifera]
gi|147783621|emb|CAN68142.1| hypothetical protein VITISV_035659 [Vitis vinifera]
gi|296084359|emb|CBI24747.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/291 (34%), Positives = 139/291 (47%), Gaps = 56/291 (19%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASISF 87
NV + GA DG TD +KAF A T+ VPPG+Y + A F G +I+F
Sbjct: 27 NVVNLGAKGDGKTDSTKAF-LHAWAAACASASPATIYVPPGRYFLRNAVFSGCKNHAITF 85
Query: 88 QLQGLLDL---------------FSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLP- 131
++ L F T +S+ G GQG W KNS P
Sbjct: 86 RIDATLVAPADYRVIGNAGNWLAFEDVTGVSILGGILDGQGTGLWAC----KNSGKSCPS 141
Query: 132 --TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----------- 178
T + F N+ I+G+ S++S+ FHI I GC N+KL ++++A DS
Sbjct: 142 GATTLGFTNSNNILISGLTSLNSQKFHIVINGCQNVKLQGVRVSASGDSPNTDGIHVQLS 201
Query: 179 ----------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRN 216
+ ++ + V CGPG GISVGSLGK +K+ V +TV+
Sbjct: 202 SGVTILDTKIKTGDDCVSIGPGASNLWIENVACGPGHGISVGSLGKELKEAGVQNVTVKT 261
Query: 217 CTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
TFT + NGVR+K+W + G A F+ I+M +V+NPI+IDQ YCP NK
Sbjct: 262 VTFTGSQNGVRIKSWARASSGFARGILFQHILMVDVQNPILIDQNYCPDNK 312
>gi|350539801|ref|NP_001234533.1| abscission polygalacturonase precursor [Solanum lycopersicum]
gi|1575705|gb|AAB09575.1| abscission polygalacturonase [Solanum lycopersicum]
gi|2459813|gb|AAC28904.1| polygalacturonase 2 [Solanum lycopersicum]
Length = 392
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 143/295 (48%), Gaps = 51/295 (17%)
Query: 20 IDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEG 79
+ A + +V+++GA +DG TD SKAF +W A T+ VP GKYL+ A F G
Sbjct: 16 LAANTNIYDVQNYGAKSDGKTDSSKAFLNAWAAACA-SNTPSTINVPAGKYLIHNANFNG 74
Query: 80 P-CKA-SISFQLQGLLDL---------------FSIDTSLSLAKGTFHGQGETAWPLNQC 122
CK+ +I+ + G L F +LS+ GTF GQG + W
Sbjct: 75 QTCKSKAITMHIDGTLLAPSDYNVIGNEENWIKFEKVNALSIYSGTFDGQGASLWACKNP 134
Query: 123 HKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---- 178
+ + T + F N+ ++G+ +S+ F I + GC N+KL +K++A +S
Sbjct: 135 NNKNCPDGTTALTFYNSNNIIMSGVTVQNSQKFQILVDGCRNVKLQGVKVSAPGNSPNTD 194
Query: 179 -----------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEV 209
+ ++ + + CGPG GIS+GSLG ++ V
Sbjct: 195 GIHVKLSSGVSIINSHIGTGDDCISIGPGTSNLWIEGIACGPGHGISIGSLGWKQQELGV 254
Query: 210 VGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
+TV+ TF+ T+NGVRVKTW G N F+ IVM NV+NPI+IDQ YCP
Sbjct: 255 QNVTVKTVTFSGTTNGVRVKTWARPSNGFVRNILFQHIVMVNVKNPIIIDQNYCP 309
>gi|224117794|ref|XP_002331633.1| predicted protein [Populus trichocarpa]
gi|222874029|gb|EEF11160.1| predicted protein [Populus trichocarpa]
Length = 390
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 141/295 (47%), Gaps = 50/295 (16%)
Query: 21 DATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGP 80
+A + NV FGA DGITD ++ F A T+ VP G YL+ F GP
Sbjct: 21 NAASASYNVSQFGANPDGITDSTQPF-LKAWSAACSSASPSTIYVPKGSYLLKATVFSGP 79
Query: 81 CKASISFQLQGLL---------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKN 125
CK I+ Q+ G L LF +S+ GT +G W + +N
Sbjct: 80 CKNKITVQIDGTLVAPTDYRALGNSGYWILFIKVNRVSVFGGTLDAKGAGFWACRKSGQN 139
Query: 126 SDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD-------- 177
+ I FN+ ND I+G+ S++S+ HI I C N+ + ++++ A +
Sbjct: 140 CPVGARS-ITFNWANDILISGLTSINSQSMHIVINSCNNVLVRNVRVIAPYNSPNTDGIH 198
Query: 178 -------------------------SSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGL 212
S++++L+S + CGPG GIS+GSLGK ++ V +
Sbjct: 199 VQISTGVTITGSTLQTGDDCISIGPSTRNLLMSSIKCGPGHGISIGSLGKDFNEDGVENI 258
Query: 213 TVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
T+ N F+ + NGVR+K+W G N F++++M NV+NPI+IDQ YCP N+
Sbjct: 259 TLTNSIFSGSDNGVRIKSWARPSNGFVRNVVFQNLIMKNVKNPIIIDQNYCPNNQ 313
>gi|125525509|gb|EAY73623.1| hypothetical protein OsI_01510 [Oryza sativa Indica Group]
Length = 503
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 149/340 (43%), Gaps = 67/340 (19%)
Query: 29 VKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKASISF 87
VKDFGA DG+TDD+ A T+W A DG G VL G+ +L+ F GPC+ S++
Sbjct: 114 VKDFGAAGDGVTDDTDALKTAWDTACADDG-AGVVLAAAGRSFLIHTTVFTGPCQGSVTL 172
Query: 88 QLQGL------------------LDLFSIDTSLSLAKGTFHGQGETAW-----PLNQCHK 124
Q+ G L + D + G G+G+ W P +
Sbjct: 173 QVDGTIVAPSEPATWPANNKRNWLVFYRADCVSLVGAGLIDGKGQKWWDLPCKPQKGGNT 232
Query: 125 NSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA---------- 174
+ C P +RF N+ T+ G+K +S FH C ++++ L I++
Sbjct: 233 HGPCDSPVAMRFAISNNVTVRGLKVQNSPEFHFRFDNCNGVRVDGLSISSPALSPNTDGI 292
Query: 175 HADSSKDILVSE-----------------------VFCGPGQGISVGSLGKGIKDEEVVG 211
H ++++D+L++ V CGPG GIS+GSLGK V
Sbjct: 293 HVENTQDVLITNTVVSNGDDCVSIGAGTLNVHIENVTCGPGHGISIGSLGKAGTKACVAN 352
Query: 212 LTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK 271
+TVRN + NGVR+KTW G S FE++ M+ V NPI+IDQ YC C +
Sbjct: 353 VTVRNAVIRHSDNGVRIKTW-QGGSGSVSAVAFENVRMDAVRNPIIIDQYYCLSKSCENE 411
Query: 272 PKDSMPNIEIGNRNLVYNGVN--VKVEGPETTSLCSNVKP 309
N + Y+G+ V GP CS+ P
Sbjct: 412 TTAVFVN------GVSYSGIRGTYDVRGPPIHFGCSDAVP 445
>gi|119507451|dbj|BAF42033.1| polygalacturonase2 [Pyrus communis]
Length = 459
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 159/343 (46%), Gaps = 64/343 (18%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGP 80
A + ++V DFGA +G DD++AF +W+ A + G VLV P K YLV EF GP
Sbjct: 93 APAKTISVDDFGAKGNG-ADDTRAFLKAWKVACSSSG--AIVLVVPQKSYLVRPIEFSGP 149
Query: 81 CKASISFQLQGLLD---------------LF-SIDTSLSLAKGTFHGQGETAWPLNQCHK 124
CK+ ++ Q+ G ++ +F ++ L + GT +G G W N C +
Sbjct: 150 CKSRLTMQIYGTIEASEDRSIYKDLDHWLMFDNVQNLLVVGPGTINGNGNIWWK-NSCKR 208
Query: 125 NSD---C-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-- 178
C Q PT + FN N+ + +K D++ H+ C+N++ + L +TA DS
Sbjct: 209 KPQPPCCKQAPTAVTFNGCNNLVVKNLKIQDAQQMHVMFQNCFNVQASCLTVTAPEDSPN 268
Query: 179 -------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDE 207
S+ + + CGPG GIS+GSLGK +
Sbjct: 269 TDGIHVANTQNITISSSVIGTGDDCISIVSGSQRVQAKNITCGPGHGISIGSLGKNGSKD 328
Query: 208 EVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
V G+ V + T+NG+R+KTW G A+N F+++ MNNV NPI+IDQ YC +
Sbjct: 329 YVSGVLVNGAKLSGTANGLRIKTWQGGS-GSATNIVFQNVQMNNVTNPIMIDQNYCDHKT 387
Query: 268 CNIKPKDSMPNIEIGNRNLVYNGVN-VKVEGPETTSLCSNVKP 309
+ + S + +N++Y + G T CS P
Sbjct: 388 KDCNQQKSAVQV----KNVLYQNIRGTSASGDAITVYCSQSVP 426
>gi|15224380|ref|NP_181915.1| putative polygalacturonase /pectinase [Arabidopsis thaliana]
gi|2281083|gb|AAB64019.1| putative polygalacturonase [Arabidopsis thaliana]
gi|91806353|gb|ABE65904.1| polygalacturonase/pectinase [Arabidopsis thaliana]
gi|330255244|gb|AEC10338.1| putative polygalacturonase /pectinase [Arabidopsis thaliana]
Length = 384
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 147/316 (46%), Gaps = 56/316 (17%)
Query: 3 LAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGT 62
+A+ L V F S + + NV FGA DG TD +KAF W+ A T
Sbjct: 1 MASLLVLFVFFFIS----SCSAQSYNVLSFGAKPDGKTDATKAFMAVWQTACA-SSRPVT 55
Query: 63 VLVPPGKYLVSFAEFEGP-CKAS-ISFQLQGLLD---------------LFSIDTSLSLA 105
++VP G++L+ F+G CK ++F++ G L F +++
Sbjct: 56 IVVPKGRFLLRSVTFDGSKCKPKPVTFRIDGTLVAPADYRVIGNEDYWIFFQHLDGITVY 115
Query: 106 KGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNL 165
G +G + W + KN T I F ++ ++G+ S++S+ FH+ I GC N+
Sbjct: 116 GGVLDARGASLWDCKKSGKNCPSG-ATTIGFQSSSNVVVSGLTSLNSQMFHVVINGCNNV 174
Query: 166 KLNDLKITA----------HADSSKDI-----------------------LVSEVFCGPG 192
KL +K+ A H SS + + V CGPG
Sbjct: 175 KLQGVKVLAAGNSPNTDGIHVQSSSSVSIFNTKISTGDDCVSIGPGTNGLWIENVACGPG 234
Query: 193 QGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNV 252
GIS+GSLGK + V +TV+ TFT T NGVR+K+W G A N F+ VMNNV
Sbjct: 235 HGISIGSLGKDSVESGVQNVTVKTVTFTGTDNGVRIKSWARPSSGFAKNIRFQHCVMNNV 294
Query: 253 ENPIVIDQLYCPYNKC 268
ENPI+IDQ YCP + C
Sbjct: 295 ENPIIIDQNYCPDHDC 310
>gi|449431860|ref|XP_004133718.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 427
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 141/299 (47%), Gaps = 52/299 (17%)
Query: 19 GIDATNRVLNVKDFGAVADGIT-DDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEF 77
G A + NV D+GA D D +KAF ++W A + T+ VP K+ +S A F
Sbjct: 42 GSIAASLTFNVVDYGAKPDNTKFDSAKAFQSAWTHACS-SSKAATIYVPKAKFYISSATF 100
Query: 78 EGPCKA-SISFQLQGLLD---------------LFSIDTSLSLAKGTFHGQGETAWPLNQ 121
GPCK +I+ ++ G L LF ++++ G GQG W Q
Sbjct: 101 NGPCKNNAITLKMDGTLVAPSNFQLTAQSKNWILFRQVNGVTVSGGVIDGQGSGLWACKQ 160
Query: 122 CHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSSK- 180
K + T + F + I+G+ S++S+ +HI + C N+K+ L I A A+S
Sbjct: 161 SGKTCP-RGTTSLEFTNSQNILISGLTSLNSQIYHIVMNKCRNVKMESLNIYAPANSPNT 219
Query: 181 --------------------------------DILVSEVFCGPGQGISVGSLGKGIKDEE 208
++ + VFCGPG GISVGSLG+ K+
Sbjct: 220 DGIDLEETTYATILDSNIGTGDDCISLGHGTFNVFIQNVFCGPGHGISVGSLGRKEKENG 279
Query: 209 VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
V +TV++C + T NGVR+K+W G + F+ I M NV+ PI+IDQ YCP+++
Sbjct: 280 VQNVTVQSCRLSNTQNGVRIKSWGRPSTGFGRDIRFQHITMTNVKYPIIIDQNYCPHHQ 338
>gi|2459815|gb|AAC28905.1| polygalacturonase 4 [Solanum lycopersicum]
Length = 387
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 144/293 (49%), Gaps = 52/293 (17%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGP- 80
ATN + NV++FGA ++G D +KAF ++W A T+ VP G YL+ F G
Sbjct: 17 ATNTIYNVQNFGAQSNGKIDSTKAFLSAWGSACASTSAS-TIYVPRGNYLIRNIYFNGQT 75
Query: 81 CKA-SISFQLQGLL----DLFSID-----------TSLSLAKGTFHGQGETAWPLNQCHK 124
CK+ +I+ + G L D +ID +S+ G F GQG + W K
Sbjct: 76 CKSNAIAIHIDGTLLAPSDYNAIDNDGSWIKFEKVNRVSIYGGIFDGQGASLWACKNSKK 135
Query: 125 NSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA---------- 174
N + T + F N+ ++G+ +S+ FHI + GC+N + +K+ +
Sbjct: 136 NCP-KGTTALAFYNSNNIVMSGVTVQNSQMFHILVDGCHNAMIQGVKVLSPGNSPNTDGI 194
Query: 175 HADSS-----------------------KDILVSEVFCGPGQGISVGSLGKGIKDEEVVG 211
H SS ++ + + CGPG GIS+GSLG +++ V
Sbjct: 195 HVQSSSGVSIMNSNIGTGDDCISIGPGNSNLWIEGIACGPGHGISIGSLGWESQEQGVQN 254
Query: 212 LTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
+TV+ +FT T NGVRVKTW G N F+ IVM+NV+NPI+IDQ YCP
Sbjct: 255 VTVKMVSFTSTENGVRVKTWARPSNGFVRNVLFQHIVMSNVQNPIIIDQNYCP 307
>gi|115436094|ref|NP_001042805.1| Os01g0296200 [Oryza sativa Japonica Group]
gi|113532336|dbj|BAF04719.1| Os01g0296200 [Oryza sativa Japonica Group]
gi|125570033|gb|EAZ11548.1| hypothetical protein OsJ_01413 [Oryza sativa Japonica Group]
Length = 503
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 150/340 (44%), Gaps = 67/340 (19%)
Query: 29 VKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKASISF 87
VKDFGA DG+TDD+ A T+W A DG G VL G+ +L+ F GPC+ S++
Sbjct: 114 VKDFGAAGDGVTDDTDALKTAWDTACADDG-AGVVLAAAGRSFLIHTTVFTGPCQGSVTL 172
Query: 88 QLQGL------------------LDLFSIDTSLSLAKGTFHGQGETAWPLN-QCHKNSD- 127
Q+ G L + D + G G+G+ W L + HK +
Sbjct: 173 QVDGTIVAPSEPATWPANNKRNWLVFYRADGVSLVGAGLIDGKGQKWWDLPCKPHKGGNT 232
Query: 128 ---CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA---------- 174
C P +RF N+ T+ G+K +S FH C ++++ L I++
Sbjct: 233 HGPCDSPVAMRFAISNNVTVRGLKVQNSPEFHFRFDNCNGVRVDGLSISSPALSPNTDGI 292
Query: 175 HADSSKDILVSE-----------------------VFCGPGQGISVGSLGKGIKDEEVVG 211
H +++ D+L++ V CGPG GIS+GSLGK V
Sbjct: 293 HVENTSDVLITNTVVSNGDDCVSIGAGTLNVHIENVTCGPGHGISIGSLGKAGTKACVAN 352
Query: 212 LTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK 271
+TVRN + NGVR+KTW G S FE++ M+ V NPI+IDQ YC C +
Sbjct: 353 VTVRNAVIRHSDNGVRIKTW-QGGSGSVSAVAFENVRMDAVRNPIIIDQYYCLSKSCENE 411
Query: 272 PKDSMPNIEIGNRNLVYNGVN--VKVEGPETTSLCSNVKP 309
N + Y+G+ V GP CS+ P
Sbjct: 412 TTAVFVN------GVSYSGIRGTYDVRGPPIHFGCSDAVP 445
>gi|116831160|gb|ABK28534.1| unknown [Arabidopsis thaliana]
Length = 385
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 147/316 (46%), Gaps = 56/316 (17%)
Query: 3 LAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGT 62
+A+ L V F S + + NV FGA DG TD +KAF W+ A T
Sbjct: 1 MASLLVLFVFFFIS----SCSAQSYNVLSFGAKPDGKTDATKAFMAVWQTACA-SSRPVT 55
Query: 63 VLVPPGKYLVSFAEFEGP-CKAS-ISFQLQGLLD---------------LFSIDTSLSLA 105
++VP G++L+ F+G CK ++F++ G L F +++
Sbjct: 56 IVVPKGRFLLRSVTFDGSKCKPKPVTFRIDGTLVAPADYRVIGNEDYWIFFQHLDGITVY 115
Query: 106 KGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNL 165
G +G + W + KN T I F ++ ++G+ S++S+ FH+ I GC N+
Sbjct: 116 GGVLDARGASLWDCKKSGKNCPSG-ATTIGFQSSSNVVVSGLTSLNSQMFHVVINGCNNV 174
Query: 166 KLNDLKITA----------HADSSKDI-----------------------LVSEVFCGPG 192
KL +K+ A H SS + + V CGPG
Sbjct: 175 KLQGVKVLAAGNSPNTDGIHVQSSSSVSIFNTKISTGDDCVSIGPGTNGLWIENVACGPG 234
Query: 193 QGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNV 252
GIS+GSLGK + V +TV+ TFT T NGVR+K+W G A N F+ VMNNV
Sbjct: 235 HGISIGSLGKDSVESGVQNVTVKTVTFTGTDNGVRIKSWARPSSGFAKNIRFQHCVMNNV 294
Query: 253 ENPIVIDQLYCPYNKC 268
ENPI+IDQ YCP + C
Sbjct: 295 ENPIIIDQNYCPDHDC 310
>gi|9967518|emb|CAC05657.1| endopolygalacturonase [Brassica napus]
gi|9967520|emb|CAC05658.1| endopolygalacturonase [Brassica napus]
Length = 434
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 159/320 (49%), Gaps = 63/320 (19%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKASI 85
++V DFGA DG TDD++AF +W++A + G +LVP GK Y + GPCK+ +
Sbjct: 68 VSVSDFGAKGDGKTDDTQAFVNAWKKACSSSGAV-NLLVPEGKTYFLKSLRLNGPCKSVL 126
Query: 86 SFQLQGLL----------DL-----FSIDTSLSL---AKGTFHGQGETAWPLNQCHKNS- 126
+ Q+ G L DL F SL++ A GT +G G W N C +N
Sbjct: 127 TVQILGTLSASQQRSDYEDLSKWITFDGVNSLTVDGGATGTVNGNGAETWWENSCKRNEA 186
Query: 127 -DC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------ 178
C + PT + F + + ++ D++ I+I C N++++++++TA ADS
Sbjct: 187 KKCTKAPTALTFYNSKNLRVNNLRVKDAQQIQISIEKCSNVQVSNVEVTAPADSPNTDGI 246
Query: 179 ---------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVG 211
S+++ ++++ CGPG GIS+GSLG V G
Sbjct: 247 HITNTQNIQVSNSIIGTGDDCISIESGSQNVQINDLTCGPGHGISIGSLGDDNSKAFVSG 306
Query: 212 LTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK 271
+TV + T NGVR+KT G ASN F++I M NVENPI+IDQ YC +KC
Sbjct: 307 VTVDGAKLSGTDNGVRIKT-NQGGSGTASNIIFQNIQMENVENPIIIDQDYCDKSKCT-- 363
Query: 272 PKDSMPNIEIGNRNLVYNGV 291
+ ++I +N+VY +
Sbjct: 364 --EQKSAVQI--KNVVYRNI 379
>gi|30349261|gb|AAP21998.1| endopolygalacturonase [Prunus persica]
Length = 351
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 140/288 (48%), Gaps = 51/288 (17%)
Query: 29 VKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKA-SISF 87
V GA DG T+ +KAF ++W +A + VP G++L+ F GPCK +I+F
Sbjct: 1 VASLGAKGDGKTESTKAFISAWAKACA-SAEPAVIYVPRGRFLLHNVVFAGPCKNNAITF 59
Query: 88 QLQGLLDL---------------FSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPT 132
++ G L F ++++ G G+G W K+ T
Sbjct: 60 RIAGTLVAPSDYRVIGNADNWISFEDVEGVTISGGILDGKGTDLWACKAAGKSCPSG-AT 118
Query: 133 PIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-------------- 178
+ F+ ND ++G+ S++S+ FHI I GC+N+K+ +K++A S
Sbjct: 119 TLSFSNSNDIKVSGVISLNSQMFHIVINGCHNVKMQSVKVSASGQSPNTDGIHVQMSSSV 178
Query: 179 -------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTF 219
+ D+ + + CGPG GIS+GSLGK ++ V +TV++ TF
Sbjct: 179 TILNSKIATGDDCVSIGPGTSDLWIENIKCGPGHGISIGSLGKDQEEAGVQNVTVKSITF 238
Query: 220 TCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
T NG+R+K+W G A + F+ VM NV+NPIVIDQ YCP NK
Sbjct: 239 FNTQNGLRIKSWGRPSTGFAKDILFQHAVMLNVQNPIVIDQNYCPDNK 286
>gi|354549141|gb|AER27666.1| polygalacturonase [Pyrus pyrifolia]
gi|354549143|gb|AER27667.1| polygalacturonase [Pyrus pyrifolia]
Length = 459
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 170/368 (46%), Gaps = 69/368 (18%)
Query: 2 LLAARFSLLVSF-ITSVRGIDATN----RVLNVKDFGAVADGITDDSKAFDTSWREAWNW 56
L+ R L S I+ + G AT+ + ++V DFGA +G DD++AF +W+ A +
Sbjct: 68 LIRPRTQLFSSRKISKIAGGIATSSAPAKTISVDDFGAKGNG-ADDTQAFLKAWKVACSS 126
Query: 57 DGIKGTVLVPPGK-YLVSFAEFEGPCKASISFQLQGLLD---------------LF-SID 99
G VLV P K YLV EF GPCK+ ++ Q+ G ++ +F ++
Sbjct: 127 SG--AIVLVVPQKSYLVRPTEFSGPCKSRLTMQIYGTIEASEDRSIYKDLDHWLMFDNVQ 184
Query: 100 TSLSLAKGTFHGQGETAWPLNQCHKNSD--C--QLPTPIRFNFLNDSTITGIKSVDSRYF 155
L + GT +G G W N C + C Q PT + FN N+ + +K D++
Sbjct: 185 NLLVVGPGTINGNGNIWWK-NSCKRKPQPPCGKQAPTAVTFNGCNNLVVKNLKIQDAQQM 243
Query: 156 HINILGCYNLKLNDLKITAHADS---------------------------------SKDI 182
H+ C+N++ + L +TA DS S+ +
Sbjct: 244 HVMFQNCFNVQASLLTVTAPEDSPNTDGIHVANTQNITISSSVIGTGDDCISIVSGSQRV 303
Query: 183 LVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNF 242
+ CGPG GIS+GSLGK + V G+ V + T+NG+R+KTW G A+N
Sbjct: 304 QAKNITCGPGHGISIGSLGKDGSKDNVSGVLVNGAKLSGTTNGLRIKTWQGGS-GSATNI 362
Query: 243 TFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNIEIGNRNLVYNGVN-VKVEGPETT 301
F+++ MNNV NPI+IDQ YC + + + S + +N++Y + G T
Sbjct: 363 VFQNVQMNNVTNPIIIDQNYCDHKTKDCNQQKSAVQV----KNVLYQNIRGTSASGDAIT 418
Query: 302 SLCSNVKP 309
CS P
Sbjct: 419 VNCSQNVP 426
>gi|255576404|ref|XP_002529094.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223531445|gb|EEF33278.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 390
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 136/291 (46%), Gaps = 54/291 (18%)
Query: 24 NRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKA 83
N NV FGA DG TD ++AF +W A G TV VP G +L+ F GPCK
Sbjct: 23 NADYNVIRFGAKPDGKTDSTEAFVRAWSSACRSTG-PATVSVPRGGFLIKPIVFSGPCKN 81
Query: 84 SISFQLQGLL----DLFSIDTS-----------LSLAKGTFHGQGETAWPLNQCHKNSDC 128
I F++ G + D +S S +++ GT +G W C K
Sbjct: 82 EILFRIDGKIVAPADYWSFGKSGFWILFYKVSRVTIHGGTIDAKGAGFW---ACRKAGMV 138
Query: 129 QLPTPIRFNFL--NDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HA 176
P +FL ND ++G+ S++S+ FHI++ +N+ L +L I A H
Sbjct: 139 CPPGARSMSFLGSNDIVVSGLTSINSQMFHISVDQSHNIILQNLNILAPSLSPNTDGVHV 198
Query: 177 DS-----------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLT 213
S SK+I + + CGPG GIS+GSL + ++ V +T
Sbjct: 199 QSSTGITIRNSTIRTGDDCISLGPGSKNIWIQTIACGPGHGISIGSLAEHTNEDGVENVT 258
Query: 214 VRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
V FT T NGVR+K+W G A N F++I+M N NPI+IDQ YCP
Sbjct: 259 VTGAIFTATQNGVRIKSWGRPTTGYAKNIVFQNIIMKNAYNPIIIDQKYCP 309
>gi|55296785|dbj|BAD68111.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 457
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 154/322 (47%), Gaps = 58/322 (18%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVL-NVKDFGAVADGITDDSKAFDTSWREAWNWDGI 59
+ + A+++ ++ + + R +A R L NV DF A DG TDD+KAF +W E N +G
Sbjct: 68 IWVEAKYTFVLLLVLT-RSSEAQKRPLYNVLDFNATGDGNTDDTKAFLAAWEETCNNEGW 126
Query: 60 KGTVLVPPGK-YLVSFAEFEGPCKASISFQLQG---------------LLDLFSIDTSLS 103
+++P G+ +L+ +F G CK+ I Q+ G L+ +S++
Sbjct: 127 P-ILIIPGGRTFLLKQIKFNGSCKSPIKIQMDGNIVAPNYIWASEADNLITFYSVNNLTL 185
Query: 104 LAKGTFHGQGETAWPLNQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGC 162
G G+G W C+ C P + F N+ ++T I +S H+ + C
Sbjct: 186 DGNGQIDGKGAIWW---TCYTEKKCVYRPVILAFAACNNLSVTNIHLTNSADKHMTVYRC 242
Query: 163 YNLKLNDLKITAHADS---------------------------------SKDILVSEVFC 189
+ ++++ I A DS + D+ ++++ C
Sbjct: 243 SQVHVHNVTIVAPGDSPNTDGITMAISDHVYISNCSIQSGDDCVSMLSYTTDVNITDITC 302
Query: 190 GPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVM 249
GPG GISVGSLG+ + V +TV NC F T NGVR+K+W +G A+ F FE+I M
Sbjct: 303 GPGHGISVGSLGR-FETALVERITVSNCNFIGTKNGVRIKSW-QGGMGQATGFIFENINM 360
Query: 250 NNVENPIVIDQLYCPYNKCNIK 271
VE+PI+IDQ YCP C +K
Sbjct: 361 TAVESPIIIDQFYCPQGNCPLK 382
>gi|357475149|ref|XP_003607860.1| Polygalacturonase [Medicago truncatula]
gi|355508915|gb|AES90057.1| Polygalacturonase [Medicago truncatula]
Length = 448
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 140/296 (47%), Gaps = 52/296 (17%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPC 81
+++ NV ++GA DG TD +KAF W +A + ++ VP GK+L+ A F G C
Sbjct: 4 SSSSTYNVINYGAKPDGKTDSTKAFGNVWAKACS-SPYPASIYVPQGKFLLGTATFSGKC 62
Query: 82 -KASISFQLQGLLDL---------------FSIDTSLSLAKGTFHGQGETAWPLNQCHKN 125
+IS + G L F +S+ G GQG W K
Sbjct: 63 INKAISITIDGTLVASSNYRVTGKNGNWLKFQHVDGVSIRGGLLDGQGTALWDCKNSDK- 121
Query: 126 SDCQL-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------ 178
S+C + T + F+ + I+G+ S++S+ FHI GC N+K+ + I A +S
Sbjct: 122 SNCPIGATTLEFSNSKNIMISGLTSMNSQMFHIVFNGCENVKMQGVNIMAAGNSPNTDGI 181
Query: 179 ---------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVG 211
+ ++ + + CGPG GIS+GSLG + + V
Sbjct: 182 HVQMSSHVTIVNSKIRTGDDCISIGPGTSNLWIENIACGPGHGISIGSLGWKLNEPGVQN 241
Query: 212 LTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
+TV+ TFT T NGVR+K+W G N F+D +M NV+NPIVIDQ YCP NK
Sbjct: 242 VTVKTVTFTGTQNGVRIKSWGRPSNGFVRNIFFQDAIMVNVQNPIVIDQNYCPNNK 297
>gi|15218742|ref|NP_176735.1| pectin lyase-like protein [Arabidopsis thaliana]
gi|2190556|gb|AAB60920.1| F5I14.10 [Arabidopsis thaliana]
gi|91806027|gb|ABE65742.1| polygalacturonase/pectinase [Arabidopsis thaliana]
gi|332196276|gb|AEE34397.1| pectin lyase-like protein [Arabidopsis thaliana]
Length = 397
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/342 (31%), Positives = 170/342 (49%), Gaps = 70/342 (20%)
Query: 7 FSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVL-- 64
FS++++ I S G LNV FGA +GI + +KAF +W A G++ +V+
Sbjct: 11 FSIVITIIMSHFGQFDARTSLNVLSFGANPNGIVESAKAFSDAWDAAC---GVEDSVVIY 67
Query: 65 VPPGKYLVSF-AEFEGP-CKA-SISFQLQGLL-------------DLFSID--TSLSLAK 106
VP G+YLVS FEG CK+ I+ ++ G L + FS ++++
Sbjct: 68 VPKGRYLVSGEVRFEGESCKSREITLRIDGTLIGPQDYSLLGKKENWFSFSGVHNVTVLG 127
Query: 107 GTFHGQGETAWPLNQCHKNS-DC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYN 164
G+F +G T W C N +C + T +RF N+ I G+ S++S+ FHI I C N
Sbjct: 128 GSFDAKGSTLW---SCKANGYNCPEGATTLRFMDSNNVKIKGVLSLNSQLFHIAINRCRN 184
Query: 165 LKLNDLKITAHADS---------------------------------SKDILVSEVFCGP 191
+K+ D++I A +S +K+++V + CGP
Sbjct: 185 IKIEDVRIIAPDESPNTDGIHIQLSTDIEVRNASIKTGDDCISIGPGTKNLMVDGITCGP 244
Query: 192 GQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNN 251
G GIS+GSL K I+++ V +TV+N F T NG+R+K+WP G F +M N
Sbjct: 245 GHGISIGSLAKSIEEQGVENVTVKNAVFVRTDNGLRIKSWPRHSNGFVERVRFLGAIMVN 304
Query: 252 VENPIVIDQLYCPYNKCNIKPKDSMPNIEIGNR--NLVYNGV 291
V PI+IDQ YCP + S P+ E G + +++Y+G+
Sbjct: 305 VSYPILIDQNYCPGDS-------SCPSQESGIKINDVIYSGI 339
>gi|116830987|gb|ABK28449.1| unknown [Arabidopsis thaliana]
Length = 398
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/342 (31%), Positives = 170/342 (49%), Gaps = 70/342 (20%)
Query: 7 FSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVL-- 64
FS++++ I S G LNV FGA +GI + +KAF +W A G++ +V+
Sbjct: 11 FSIVITIIMSHFGQFDARTSLNVLSFGANPNGIVESAKAFSDAWDAAC---GVEDSVVIY 67
Query: 65 VPPGKYLVSF-AEFEGP-CKA-SISFQLQGLL-------------DLFSID--TSLSLAK 106
VP G+YLVS FEG CK+ I+ ++ G L + FS ++++
Sbjct: 68 VPKGRYLVSGEVRFEGESCKSREITLRIDGTLIGPQDYSLLGKKENWFSFSGVHNVTVLG 127
Query: 107 GTFHGQGETAWPLNQCHKNS-DC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYN 164
G+F +G T W C N +C + T +RF N+ I G+ S++S+ FHI I C N
Sbjct: 128 GSFDAKGSTLW---SCKANGYNCPEGATTLRFMDSNNVKIKGVLSLNSQLFHIAINRCRN 184
Query: 165 LKLNDLKITAHADS---------------------------------SKDILVSEVFCGP 191
+K+ D++I A +S +K+++V + CGP
Sbjct: 185 IKIEDVRIIAPDESPNTDGIHIQLSTDIEVRNASIKTGDDCISIGPGTKNLMVDGITCGP 244
Query: 192 GQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNN 251
G GIS+GSL K I+++ V +TV+N F T NG+R+K+WP G F +M N
Sbjct: 245 GHGISIGSLAKSIEEQGVENVTVKNAVFVRTDNGLRIKSWPRHSNGFVERVRFLGAIMVN 304
Query: 252 VENPIVIDQLYCPYNKCNIKPKDSMPNIEIGNR--NLVYNGV 291
V PI+IDQ YCP + S P+ E G + +++Y+G+
Sbjct: 305 VSYPILIDQNYCPGDS-------SCPSQESGIKINDVIYSGI 339
>gi|414876106|tpg|DAA53237.1| TPA: hypothetical protein ZEAMMB73_980438 [Zea mays]
Length = 437
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 138/294 (46%), Gaps = 56/294 (19%)
Query: 29 VKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKASISF 87
V++F A ADG TDD+KAF +W+ A + D + V+VP G+ +L+S F+GPCK+ I+
Sbjct: 73 VRNFHAAADGKTDDAKAFLAAWKAACS-DEARPVVVVPGGRTFLLSQVTFQGPCKSPITI 131
Query: 88 QLQG---------------LLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQL-P 131
QL G LL +D+ G G+G W C+ + C P
Sbjct: 132 QLDGRIVAPNRIWTTQPANLLVFHGVDSLTLDGNGEIDGRGAIWW---DCYNHKRCNARP 188
Query: 132 TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------- 178
+ F+F + +T I+ +S H+ + C ++ + I A DS
Sbjct: 189 ILLAFSFCDHLRVTRIRLTNSADKHMTLFRCSQALVDGVSIAAPPDSPNTDGITVASSNH 248
Query: 179 --------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCT 218
++++ V+ CGPG GISVGSLG+ + V + V NC+
Sbjct: 249 TVISNCSIRSGDDCVSILSQTRNVTVTRSTCGPGHGISVGSLGRS-ESAVVEQIVVTNCS 307
Query: 219 FTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKP 272
F T NGVR+K+W G A F F + M V+ PIVIDQ YCP C +KP
Sbjct: 308 FVGTMNGVRIKSWQGGK-GYAKGFLFAGLNMTGVQYPIVIDQFYCPQGNCPVKP 360
>gi|5902387|gb|AAD55489.1|AC009322_29 Similar to polygalacturonases [Arabidopsis thaliana]
Length = 459
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 146/310 (47%), Gaps = 61/310 (19%)
Query: 23 TNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKY-LVSFAEFEGPC 81
+ R+L+V +FGA +G+TDD+KAF +W+ A + +K +LVP L+ + GPC
Sbjct: 49 SERLLHVGNFGAKGNGVTDDTKAFADAWKTACS-SKVKTRILVPENYTCLLRPIDLSGPC 107
Query: 82 KASISFQLQGL------------------LDLFSIDTSLSLAKGTFHGQGETAWPLNQCH 123
KA ++ Q+ G L + GT +G G+ W + H
Sbjct: 108 KARLTLQISGTIIAPNDPDVWEGLNRRKWLYFHGLSRLTVEGGGTVNGMGQEWWERSCKH 167
Query: 124 KNSD-CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--- 178
+S+ C+ PT + F+ + + + +DS+ HI + C + ++ LK+ A A S
Sbjct: 168 NHSNPCRGAPTALTFHKCKNMRVENLNVIDSQQMHIALTSCRRVTISGLKVIAPATSPNT 227
Query: 179 ------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEE 208
S I +S + CGPG GIS+GSLGK EE
Sbjct: 228 DGIHISVSRGIVIDNTTVSTGDDCISIVKNSTQISISNIICGPGHGISIGSLGKSKSWEE 287
Query: 209 VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP---- 264
V +TV + T+NGVR+KTW G+ S F +I MNNV NPI+IDQ YC
Sbjct: 288 VRDITVDTAIISDTANGVRIKTWQGGS-GLVSKIIFRNIKMNNVSNPIIIDQYYCDSRKP 346
Query: 265 -YNKCNIKPK 273
N+ NI+P+
Sbjct: 347 CANQLNIEPE 356
>gi|357131906|ref|XP_003567574.1| PREDICTED: polygalacturonase At1g48100-like [Brachypodium
distachyon]
Length = 499
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 161/364 (44%), Gaps = 73/364 (20%)
Query: 21 DATNRVLNV-KDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFE 78
+A + V +V KDFGA DG+TDD+ A T+W A D +G V+ G +LV F
Sbjct: 100 EAADNVYDVIKDFGAAGDGVTDDTDAIKTAWDTACQ-DAGEGVVVAAAGHSFLVRSTVFT 158
Query: 79 GPCKASISFQLQGL------------------LDLFSIDTSLSLAKGTFHGQGETAWPLN 120
GPC+ S++ Q+ G L + D G G+G+ W L
Sbjct: 159 GPCQGSVTLQIDGTIVAPSEPTEWPANSKRNWLVFYKADGVSLRGAGLIDGKGQKWWDLP 218
Query: 121 -QCHKNSD----CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA- 174
+ HK + C P +RF N+ T+ G+K +S FH C + ++ L I++
Sbjct: 219 CKPHKGGNTHGPCDSPVALRFFMSNNVTVQGLKVQNSPEFHFRFDSCRGVHVHGLSISSP 278
Query: 175 ---------HADSSKDILVSE-----------------------VFCGPGQGISVGSLGK 202
H ++++D+L++ V CGPG GIS+GSLGK
Sbjct: 279 ALSPNTDGIHVENTQDVLIANTVVSNGDDCVSIGAGTLNVHIENVTCGPGHGISIGSLGK 338
Query: 203 GIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLY 262
V +TVRN + NGVR+KTW G S TFE++ M+ V NPI+IDQ Y
Sbjct: 339 QGTRACVSNITVRNAVIRHSDNGVRIKTWQGGS-GSVSGVTFENVRMDAVRNPIIIDQYY 397
Query: 263 CPYNKCNIKPKDSMPNIEIGNRNLVYNGVN--VKVEGPETTSLCSNVKP----TLFGKQ- 315
C C N + Y+G+ V GP CS+ P TL G +
Sbjct: 398 CLSKSCENATTAVFVN------GVTYSGIRGTYDVRGPPIHFGCSDAVPCTNITLSGVEL 451
Query: 316 IPAT 319
+PAT
Sbjct: 452 LPAT 455
>gi|224107092|ref|XP_002314373.1| predicted protein [Populus trichocarpa]
gi|222863413|gb|EEF00544.1| predicted protein [Populus trichocarpa]
Length = 320
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 132/269 (49%), Gaps = 53/269 (19%)
Query: 44 KAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCK--ASISFQLQGLLD------- 94
++F +W+ A N+ G K +L+P G +L+ F+GPC+ A I Q+ G L
Sbjct: 1 QSFIRAWKAACNYRG-KARLLIPKGTFLIGATIFQGPCQGPAPIKVQIAGTLKAVPDPSM 59
Query: 95 -------LF-SIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITG 146
LF +I L GT GQG W N + + P+ I+FN + + I
Sbjct: 60 YEEDFWILFENIKGLLVTGTGTVDGQGNAVWKYNV--GDGGAKFPSSIKFNHVVNGIIRQ 117
Query: 147 IKSVDSRYFHINILGCYNLKLNDLKITAHADSSK-------------------------- 180
I SV+ FHI+I+ N+K +L+I A +DS
Sbjct: 118 ITSVNPMGFHISIVLSQNIKAKNLRIFAPSDSPNTDGIHISQTNQVYVSNSVIGTGDDCI 177
Query: 181 -------DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPD 233
D+ + V CGPG GIS+GSLGK +E+V G+TV+NCT T NG+R+KT+
Sbjct: 178 GIIRGCTDVHIRNVTCGPGHGISIGSLGKYQDEEDVRGITVKNCTLNNTDNGIRIKTYGG 237
Query: 234 SHIGIASNFTFEDIVMNNVENPIVIDQLY 262
S AS F+DIVM V+NPI+IDQ Y
Sbjct: 238 SPPSQASGILFQDIVMVRVKNPIIIDQSY 266
>gi|397530421|gb|AFO53698.1| fruit ripening and abscission polygalacturonase [Elaeis guineensis]
gi|448872674|gb|AGE46022.1| polygalacturonase [Elaeis guineensis]
Length = 391
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 148/316 (46%), Gaps = 60/316 (18%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK 60
LLLA L++ F +SV+ +V FGA +G TD +K+F ++W A +
Sbjct: 11 LLLAI---LMIHFSSSVKA------SYDVTSFGAKPNGRTDSTKSFISAWTAACHSTN-P 60
Query: 61 GTVLVPPGKYLVSFAEFEGPCKAS-ISFQLQGLLD---------------LFSIDTSLSL 104
T+ VP G +L+ F GPC++S I+ Q+ G L LF +S+
Sbjct: 61 ATIHVPSGFFLIGPVTFNGPCRSSRITIQIDGTLVAPSNYANLRNLEQWILFDHVDGISV 120
Query: 105 AKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYN 164
GT G G W +N + + F + I+G+ S++S FHI I GC
Sbjct: 121 YGGTIDGHGSPLWACKAAGRNCPAGARSLV-FRNSKNILISGLTSINSERFHIVIDGCQV 179
Query: 165 LKLNDLKITA----------HADSSKDILVS-----------------------EVFCGP 191
+ ++ ++ITA H SS D+ ++ +V CGP
Sbjct: 180 VTVHGVRITAPGNSPNTDGIHVQSSTDVTITGAGIKTGDDCISIGPGTTNLWIEKVTCGP 239
Query: 192 GQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNN 251
G GIS+GSLG +++ V +TV+ FT T NG+R+KTW G FE +M N
Sbjct: 240 GHGISIGSLGNEYEEKGVENVTVKTAVFTGTENGLRIKTWGRPSEGFVKGVVFEHAMMQN 299
Query: 252 VENPIVIDQLYCPYNK 267
V NPI+IDQ YCP+ K
Sbjct: 300 VRNPIIIDQNYCPHEK 315
>gi|297828105|ref|XP_002881935.1| hypothetical protein ARALYDRAFT_483504 [Arabidopsis lyrata subsp.
lyrata]
gi|297327774|gb|EFH58194.1| hypothetical protein ARALYDRAFT_483504 [Arabidopsis lyrata subsp.
lyrata]
Length = 384
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 137/291 (47%), Gaps = 52/291 (17%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGP-CKAS-I 85
NV FGA DG TD +KAF W A T++VP G++L+ F+G CK +
Sbjct: 22 NVLSFGAKPDGKTDATKAFMAVWETACA-SSRPVTIVVPKGRFLLRSVTFDGSKCKPKPV 80
Query: 86 SFQLQGLL---------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQL 130
+F++ G L F +++ G +G + W + KN
Sbjct: 81 TFRIDGTLLAPADYRVIGNEDYWIFFQHLDGITVYGGVLDARGASLWDCKKSGKNCPSG- 139
Query: 131 PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADSSK 180
T I F ++ ++G+ S++S+ FH+ I GC N+KL +K+ A H SS
Sbjct: 140 ATTIGFQSSSNVVVSGLTSLNSQMFHVVINGCNNVKLQGVKVLAAGNSPNTDGIHVQSSS 199
Query: 181 DI-----------------------LVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNC 217
+ + V CGPG GIS+GSLGK + V +TV+
Sbjct: 200 TVSIFNTKISTGDDCVSIGPGTNGLWIENVACGPGHGISIGSLGKDSVESGVQNVTVKTV 259
Query: 218 TFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
TFT T NGVR+K+W G A N F+ VMNNVENPI+IDQ YCP + C
Sbjct: 260 TFTGTDNGVRIKSWARPSSGFAKNIRFQHCVMNNVENPIIIDQNYCPDHDC 310
>gi|255566763|ref|XP_002524365.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223536326|gb|EEF37976.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 387
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 157/337 (46%), Gaps = 59/337 (17%)
Query: 5 ARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVL 64
A L+ F V AT+ NV +GA +GITD +KAF +W A +
Sbjct: 2 ASLFFLIFFALYVNSSFATDN-YNVLSYGAKPNGITDSTKAFLDAWAAACGSTD-STMIY 59
Query: 65 VPPGKYLVSFAEFEGPCKA-SISFQLQGLL----DLFSIDTS-----------LSLAKGT 108
VP G+YL+ F+G CK+ SI+ ++ G L D + + +S+ G
Sbjct: 60 VPKGRYLLGSMSFKGGCKSHSITIRIDGTLVAPEDYLILGKATSWLSFEGVDGVSIIGGA 119
Query: 109 FHGQGETAWPLNQCHKNSDCQL-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 167
+G T W K +DC T +RF N+ I G+ S++S+ FHI I GC ++ +
Sbjct: 120 LDAKGSTLWDCKA--KGTDCPTGATTLRFTNSNNIRINGLLSLNSQMFHIAINGCQDVHV 177
Query: 168 NDLKITAHADS---------------------------------SKDILVSEVFCGPGQG 194
LK+ A DS +K++ + V CGPG G
Sbjct: 178 EGLKVIASRDSPNTDGFHVQSSNNVVIMNSVIKTGDDCISIGPGTKNLWIEGVKCGPGHG 237
Query: 195 ISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVEN 254
IS+GSL K ++E V +TV+ F T NG R+K+W G F +M+NV+N
Sbjct: 238 ISIGSLAKDTEEEGVQNVTVKRTIFADTQNGFRIKSWARHSNGFVKRIRFIGAIMSNVQN 297
Query: 255 PIVIDQLYCPYNKCNIKPKDSMPNIEIGNRNLVYNGV 291
PI+IDQ YCP+ NI + + I+I +++Y G+
Sbjct: 298 PIIIDQHYCPH---NINCPNQVSGIKI--NDVIYQGI 329
>gi|426204257|gb|AFY12685.1| polygalacturonase 11c, partial [Medicago polymorpha]
Length = 240
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 110/206 (53%), Gaps = 39/206 (18%)
Query: 105 AKGTFHGQG-----ETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINI 159
KG F GQG + A K S+ ++ + F F+N+S + G+ S DS+ FH+ +
Sbjct: 35 GKGVFDGQGANVYKQAAPAAAWSGKKSNLKIFMNLGFMFVNNSMVRGLTSKDSKNFHVMV 94
Query: 160 LGCYNLKLNDLKITAH---------------------------------ADSSKDILVSE 186
LGC N + +TA D S+ I V
Sbjct: 95 LGCNNFTFDGFTVTAPGNSPNTDGIHMGRSTDVKILNTNIGTGDDCISLGDGSRKITVQN 154
Query: 187 VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIA-SNFTFE 245
V CGPG GIS+GSLGK ++ V G+ V+NCT T T NGVR+KTWPD+ I S+ FE
Sbjct: 155 VKCGPGHGISIGSLGKYTTEDNVEGVIVKNCTLTATENGVRIKTWPDAPGTITVSDIHFE 214
Query: 246 DIVMNNVENPIVIDQLYCPYNKCNIK 271
+I+MNNV+NPI+IDQ YCP+N+C+ K
Sbjct: 215 NIIMNNVKNPIIIDQEYCPWNQCSKK 240
>gi|426204252|gb|AFY12682.1| polygalacturonase 11c, partial [Medicago noeana]
Length = 240
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 109/206 (52%), Gaps = 39/206 (18%)
Query: 105 AKGTFHGQGETAWPLNQCH-----KNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINI 159
KG F GQG + K S+ ++ + F F+N+S + G+ S DS+ FH+ +
Sbjct: 35 GKGVFDGQGANVYKQATSAAAWSGKKSNVKIMMNLGFMFVNNSMVHGLTSKDSKNFHVMV 94
Query: 160 LGCYNLKLNDLKITAHADS---------------------------------SKDILVSE 186
LGC N + +TA DS S+ I V
Sbjct: 95 LGCNNFTFDGFTVTAPGDSPNTDGIHMGRSTDIKILNTNIATGDDCISLGDGSRKITVQG 154
Query: 187 VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIA-SNFTFE 245
V CGPG G+SVGSLGK ++ V G+ V+NCT T T NGVR+KTWPD+ I S+ FE
Sbjct: 155 VKCGPGHGLSVGSLGKYTTEDNVEGVIVKNCTLTGTLNGVRIKTWPDAPGTITVSDIHFE 214
Query: 246 DIVMNNVENPIVIDQLYCPYNKCNIK 271
DI+MNNV NPI+IDQ YCP+N+C+ K
Sbjct: 215 DIIMNNVMNPIIIDQEYCPWNQCSKK 240
>gi|51507673|emb|CAH18929.1| polygalacturonase [Pyrus communis]
Length = 460
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 157/342 (45%), Gaps = 62/342 (18%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPC 81
A + ++V DFGA +G DD++AF +W+ A + G ++VP KYLV EF GPC
Sbjct: 94 APAKTISVDDFGAKGNG-ADDTQAFMKAWKAACSSSGAI-VLVVPQKKYLVRPIEFSGPC 151
Query: 82 KASISFQLQGLLD---------------LF-SIDTSLSLAKGTFHGQGETAWPLNQCHKN 125
K+ ++ Q+ G ++ +F ++ L + GT +G G W N C +
Sbjct: 152 KSQLTVQIYGTIEASEDRSIYKDIDHRLIFDNVQNLLVVGPGTINGSGNIWWK-NSCKRK 210
Query: 126 SD----CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--- 178
PT + FN N+ + +K D++ H+ C N++ + L +TA DS
Sbjct: 211 PQPPCGTYAPTAVTFNRCNNLVVKNLKIQDAQQMHVRFQNCINVQASRLTVTAPEDSPNT 270
Query: 179 ------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEE 208
S+ + +++ CGPG GIS+GSLG+ +
Sbjct: 271 DGIHVTNTQNITISSSVIGTGDDCISIVSGSERVQATDITCGPGHGISIGSLGEDGSKDH 330
Query: 209 VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
V G+ V + TSNG+R+KTW G A+N F + MN+V NPI+IDQ YC
Sbjct: 331 VSGVLVNGAKLSGTSNGLRIKTWQGGS-GSATNIVFPECAMNDVTNPIIIDQNYCDQKTK 389
Query: 269 NIKPKDSMPNIEIGNRNLVYNGVNVKVEGPETTSL-CSNVKP 309
+ K + S + +N++Y + + +L CS P
Sbjct: 390 DCKQQKSAVQV----KNVLYQNIRGTSASADAITLNCSQSVP 427
>gi|18412685|ref|NP_565232.1| putative polygalacturonase [Arabidopsis thaliana]
gi|75332048|sp|Q94AJ5.1|PGLR5_ARATH RecName: Full=Probable polygalacturonase At1g80170; Short=PG;
AltName: Full=Pectinase At1g80170; Flags: Precursor
gi|15028105|gb|AAK76676.1| putative polygalacturonase [Arabidopsis thaliana]
gi|23296942|gb|AAN13206.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332198245|gb|AEE36366.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 444
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 140/299 (46%), Gaps = 56/299 (18%)
Query: 23 TNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKY-LVSFAEFEGPC 81
+ R+L+V +FGA +G+TDD+KAF +W+ A + +K +LVP L+ + GPC
Sbjct: 49 SERLLHVGNFGAKGNGVTDDTKAFADAWKTACS-SKVKTRILVPENYTCLLRPIDLSGPC 107
Query: 82 KASISFQLQGL------------------LDLFSIDTSLSLAKGTFHGQGETAWPLNQCH 123
KA ++ Q+ G L + GT +G G+ W + H
Sbjct: 108 KARLTLQISGTIIAPNDPDVWEGLNRRKWLYFHGLSRLTVEGGGTVNGMGQEWWERSCKH 167
Query: 124 KNSD-CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--- 178
+S+ C+ PT + F+ + + + +DS+ HI + C + ++ LK+ A A S
Sbjct: 168 NHSNPCRGAPTALTFHKCKNMRVENLNVIDSQQMHIALTSCRRVTISGLKVIAPATSPNT 227
Query: 179 ------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEE 208
S I +S + CGPG GIS+GSLGK EE
Sbjct: 228 DGIHISVSRGIVIDNTTVSTGDDCISIVKNSTQISISNIICGPGHGISIGSLGKSKSWEE 287
Query: 209 VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
V +TV + T+NGVR+KTW G+ S F +I MNNV NPI+IDQ YC K
Sbjct: 288 VRDITVDTAIISDTANGVRIKTWQGGS-GLVSKIIFRNIKMNNVSNPIIIDQYYCDSRK 345
>gi|356558585|ref|XP_003547585.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 412
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 145/315 (46%), Gaps = 56/315 (17%)
Query: 3 LAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGT 62
L F +SF +S DA++ +NV FGA +G D + +F +W A T
Sbjct: 8 LMLLFLATISFFSSTFSKDASS--INVLSFGAKPNGKFDSTTSFLKAWSNACK-SKESAT 64
Query: 63 VLVPPGKYLVSFAEFEGPCKASISFQL---------------QGLLDLFSIDTSLSLAKG 107
VP G +L+ FEGPC +I F++ G+ +F S+ G
Sbjct: 65 FYVPKGNFLIKQVTFEGPCSNNIKFRIDGTIVAPSDYRSHGNSGMWIMFRNLNGFSVQGG 124
Query: 108 TFHGQGETAWPLNQCHKN-SDCQL-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNL 165
TF G+G++ W +C K+ S C I F+ ND ++G+ S++S+ HI + C N+
Sbjct: 125 TFDGKGDSYW---RCRKSGSSCPAGARSITFSSCNDVKVSGLTSLNSQAMHIAVDHCKNI 181
Query: 166 KLNDLKITAHADS---------------------------------SKDILVSEVFCGPG 192
++KI A + S + ++ + + CGPG
Sbjct: 182 LFKNVKIDAPSTSPNTDGFNVILSTGVTVSQAIISTGDDCIALSQGNTNVWIEHITCGPG 241
Query: 193 QGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNV 252
GIS+GSLG + V +TV + F T NGVR+K+W G ASN F ++ M N
Sbjct: 242 HGISIGSLGAYKNEAGVHNVTVTDSIFEGTQNGVRIKSWAQPSNGYASNIVFRNLTMKNA 301
Query: 253 ENPIVIDQLYCPYNK 267
NPI+IDQ YCP +K
Sbjct: 302 NNPIIIDQNYCPGDK 316
>gi|2459817|gb|AAC28906.1| polygalacturonase 5 [Solanum lycopersicum]
Length = 387
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 142/294 (48%), Gaps = 54/294 (18%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGP- 80
A N + NV+++GA ++G D SKAF ++W A T+ VP G YL+ F G
Sbjct: 17 AKNTIYNVQNYGAKSNGKIDSSKAFLSAWGSACASTSAS-TIYVPRGIYLIRKIYFNGQT 75
Query: 81 CKA-SISFQLQGLL---------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHK 124
CK+ +I+ ++ G L F +S+ G F GQG + W + K
Sbjct: 76 CKSNAITIRIDGTLLAPSDYNVIGNDGNWITFENVNGVSIYGGIFDGQGASLWTCKKSQK 135
Query: 125 NSDCQL-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA--------- 174
N C + T + F N+ + G+ +S+ FHI + GC+N + +K+ A
Sbjct: 136 N--CPIGTTALAFYNSNNIVMNGVIVQNSQMFHILVDGCHNAMIQGVKVLAPGNSPNTDG 193
Query: 175 -HADSS-----------------------KDILVSEVFCGPGQGISVGSLGKGIKDEEVV 210
H SS ++ + + CGPG GIS+GSLG K++ V
Sbjct: 194 IHVQSSSGVSIRNSNIGTGDDCISIGPGNSNLWIEGIACGPGHGISIGSLGWESKEQGVQ 253
Query: 211 GLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
+TV+ TFT T NGVRVKTW G + F+ IVM+NV+NPI+IDQ YCP
Sbjct: 254 NVTVKTVTFTGTQNGVRVKTWARPSSGFVRHVLFQHIVMSNVQNPIIIDQNYCP 307
>gi|356537541|ref|XP_003537285.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 428
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 142/297 (47%), Gaps = 57/297 (19%)
Query: 20 IDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEG 79
I ++ + +NV D+GA DG TDD++AF +W A + G +VP YL+ F G
Sbjct: 55 ISSSLKTVNVNDYGARGDGKTDDTQAFKEAWEVACSSGG--AVFVVPRKNYLLKPFTFSG 112
Query: 80 PCKASISFQLQGLLD----------------LFSIDTSLSL-AKGTFHGQGETAWPLNQC 122
PC++ I Q+ G+++ +F LS+ GT G G W N C
Sbjct: 113 PCESDIEVQISGIIEASENLSDYSEDLTHWLVFDSIEKLSVKGGGTIDGNGNIWWQ-NSC 171
Query: 123 HKNSD--CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS- 178
N C+ PT + F D T+ + + + ++ N++++DL +TA DS
Sbjct: 172 KVNEKLPCKNAPTALTFYKCKDLTVEDLTIKNGQQMQVSFQNSENVQVSDLTVTAPGDSP 231
Query: 179 --------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKD 206
SKD+L +++ CGPG GIS+GSLG
Sbjct: 232 NTDGIHVTNTQNIQISNSVIGTGDDCISIVSGSKDVLATDIICGPGHGISIGSLGAEGSK 291
Query: 207 EEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
+ V G+TV+ + T+NG+R+KTW G ASN F++I M+NV NPI+IDQ YC
Sbjct: 292 DFVSGITVKGAQLSGTTNGLRIKTWQGGS-GSASNIQFQNIQMDNVANPIIIDQNYC 347
>gi|16903125|gb|AAL30418.1|AF434714_1 dehiscence-related endopolygalaturonase [Glycine max]
Length = 428
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 142/297 (47%), Gaps = 57/297 (19%)
Query: 20 IDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEG 79
I ++ + +NV D+GA DG TDD++AF +W A + G +VP YL+ F G
Sbjct: 55 ISSSLKTVNVNDYGAPGDGKTDDTQAFKEAWEVACSSGG--AVFVVPRKNYLLKPFTFSG 112
Query: 80 PCKASISFQLQGLLD----------------LFSIDTSLSL-AKGTFHGQGETAWPLNQC 122
PC++ I Q+ G+++ +F LS+ GT G G W N C
Sbjct: 113 PCESDIEVQISGIIEASENLSDYSEDLTHWLVFDSIEKLSVKGGGTIDGNGNIWWQ-NSC 171
Query: 123 HKNSD--CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS- 178
N C+ PT + F D T+ + + + ++ N++++DL +TA DS
Sbjct: 172 KVNEKLPCKNAPTALTFYKCKDLTVEDLTIKNGQQMQVSFQNSENVQVSDLTVTAPGDSP 231
Query: 179 --------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKD 206
SKD+L +++ CGPG GIS+GSLG
Sbjct: 232 NTDGIHVTNTQNIQISNSVIGTGDDCISIVSGSKDVLATDIICGPGHGISIGSLGAEGSK 291
Query: 207 EEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
+ V G+TV+ + T+NG+R+KTW G ASN F++I M+NV NPI+IDQ YC
Sbjct: 292 DFVSGITVKGAQLSGTTNGLRIKTWQGGS-GSASNIQFQNIQMDNVANPIIIDQNYC 347
>gi|296083402|emb|CBI23357.3| unnamed protein product [Vitis vinifera]
Length = 401
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 153/347 (44%), Gaps = 66/347 (19%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAF-DTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGP 80
ATN V NV FGA DG+TD +KAF D + + VP G+YL+ A F G
Sbjct: 27 ATN-VYNVISFGAKGDGLTDSTKAFTDAWAAACASIASTTSIIFVPRGRYLLRPAVFAGQ 85
Query: 81 C-KASISFQLQGLL-------------DLFSID--TSLSLAKGTFHGQGETAWPLNQCHK 124
C + I ++G L FS + + +S+ G +G W
Sbjct: 86 CTRTRIIILIKGTLVAPSDYRILGKADSWFSFEGVSGVSILGGVLDARGHALWACKAAGN 145
Query: 125 NSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----- 178
C T + F N+ I G+ SV+S+ FHI I GC N++L + I A S
Sbjct: 146 QQHCPSGATTLSFTNSNNIMIKGVLSVNSQMFHIVINGCNNVRLQGISIKAPESSPNTDG 205
Query: 179 ----------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVV 210
++++ + V CGPG GIS+GSL K +++E V
Sbjct: 206 IHVQLSANIAIVRSIIRTGDDCISIGPGTRNLWIERVKCGPGHGISIGSLAKDMEEEGVE 265
Query: 211 GLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNI 270
+TVR FT T NG+R+K+WP G + F +M+NV+ PIVIDQ YCP +
Sbjct: 266 NVTVRTAVFTGTQNGLRIKSWPRPSKGFVNGVHFRGAIMDNVQYPIVIDQNYCPGD---- 321
Query: 271 KPKDSMPNIEIGNRNLVYNGVNVKVEGPETTSL-----CSNVKPTLF 312
+ P+ E G + V N ++EG T + CS P F
Sbjct: 322 ---EDCPSQESGVK--VSNVTYKEIEGTSATEVAIKFHCSATDPCTF 363
>gi|356503131|ref|XP_003520365.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase
At3g15720-like [Glycine max]
Length = 472
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 142/296 (47%), Gaps = 63/296 (21%)
Query: 20 IDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFE 78
+ N + NV DFGAV DG TDD++AF +W+ G T+L+PP K +LV+ +
Sbjct: 108 VGTQNTIYNVIDFGAVGDGKTDDTQAFLKAWQSMCEAQGTS-TLLIPPNKVFLVTSMXLK 166
Query: 79 GPCKA-SISFQLQGLLDLFSIDT------------------SLSLAKGTFHGQGETAWPL 119
GPC A S+ QLQG++ + D ++ + G G G W
Sbjct: 167 GPCVAPSVQIQLQGVIVAPTKDAWVEGNLNTLIMISNVNGLTIDGSGGLIDGYGSAWWAC 226
Query: 120 NQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS- 178
C + P+ + N N ++T + ++S HI++ GC + + I+A DS
Sbjct: 227 KSCPR------PSVLIINSCNSVSVTNLNMINSPKSHIHVNGCEGATFSHINISAPGDSP 280
Query: 179 ---------SKDILVSE-----------------------VFCGPGQGISVGSLGKGIKD 206
SK+I++ + + CGPG GIS+GSLGK K
Sbjct: 281 NTDGFDISTSKNIMIEDSTIATGDDCIAISGGSSYINVTGIACGPGHGISIGSLGK--KF 338
Query: 207 EEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLY 262
+ V + VRNC+F T+NG R+KT+P+ +G A TFEDI + NPI+IDQ Y
Sbjct: 339 DTVQEVYVRNCSFIRTTNGARIKTFPNG-MGYAKQITFEDITLEQTRNPIIIDQEY 393
>gi|356544252|ref|XP_003540568.1| PREDICTED: probable polygalacturonase At3g15720-like [Glycine max]
Length = 402
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/348 (31%), Positives = 159/348 (45%), Gaps = 65/348 (18%)
Query: 1 LLLAARFSL-LVSFITSVRGIDATNRV--LNVKDFGAVADGITDDSKAFDTSWREAWNWD 57
+L+A F L LVS + R +A + NV D+GA+ DG+TDDS+AF +W
Sbjct: 3 VLIAIFFLLYLVSHCSCSRLREAAINLNTFNVMDYGAIGDGLTDDSQAFLKAWSMVCAMK 62
Query: 58 GIKGTVLVPPGK-YLVSFAEFEGPCK-ASISFQLQG------------------LLDLFS 97
T+ VPPGK +++ +F GPC +S+ FQL+G +D +
Sbjct: 63 NGAATLKVPPGKTFMLKPLQFSGPCSFSSVHFQLEGDVVAPKSTEAWKGQDSSKWIDFSN 122
Query: 98 IDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHI 157
+D + G G G W N C K C PT + + N+ +TG + ++S HI
Sbjct: 123 VDGLIIDGGGQIDGSGSVWW--NSC-KVKSCSRPTALSIHNCNNLQLTGTRHLNSARNHI 179
Query: 158 NILGCYNLKLNDLKITAHADS----------SKDILVSE--------------------- 186
+I + + ++ ITA DS S IL+
Sbjct: 180 SINNSNHTHIFNVTITAPQDSPNTDGIDVSQSSYILIQRSTIATGDDCIAMNSGTSYVNI 239
Query: 187 --VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTF 244
+ CGPG GISVGSLGK + V + V NC F NG+R+KTWP G A N F
Sbjct: 240 TGITCGPGHGISVGSLGKKGTCQTVEHVHVSNCNFKGADNGMRIKTWPGG-CGYARNIKF 298
Query: 245 EDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNIEIGNRNLVYNGVN 292
E IV+ N +NPI+IDQ Y N++ +D E+ + Y VN
Sbjct: 299 EHIVLTNTKNPIIIDQDY-----ENVQNEDKKQTSEVQISGVTYRYVN 341
>gi|359482000|ref|XP_002277214.2| PREDICTED: polygalacturonase-like [Vitis vinifera]
gi|297739725|emb|CBI29907.3| unnamed protein product [Vitis vinifera]
Length = 442
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 150/301 (49%), Gaps = 61/301 (20%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK--YLVSFAEFEG 79
A+ + ++V D+GA DG +D ++AF +W A + +G+VLV P YL+ FEG
Sbjct: 71 ASVKTVSVNDYGAKGDG-SDATEAFKKAWEAACS---SQGSVLVVPKNKNYLLKPITFEG 126
Query: 80 PCKASISFQLQGLLDL------FSIDTSLSL-----------AKGTFHGQGETAWPLNQC 122
PCK+SI+ Q+ G + +S D + L GT +G G+T W N C
Sbjct: 127 PCKSSITVQIYGTVQASADRSAYSNDMTRWLVFENVQNLAVQGGGTINGNGKTWWE-NSC 185
Query: 123 HKNSD--CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS- 178
N D C+ PT + F + + +K +++ H++ C ++ + L +TA DS
Sbjct: 186 KVNDDLSCKDAPTALTFYNCKNLVVKNLKIQNAQQMHVSFEKCVGVQASGLTVTAPGDSP 245
Query: 179 --------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKD 206
++++ + + CGPG GIS+GSLG G +
Sbjct: 246 NTDGIHVTDTQNIQISSSVIGTGDDCISIVSGTQNLQATGITCGPGHGISIGSLGSGNSE 305
Query: 207 EEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYN 266
V +TV T + T+NGVR+KTWP G ASN F++I M+NV+NPI+IDQ YC +
Sbjct: 306 AHVSDITVNGATLSGTTNGVRIKTWPGGS-GSASNIKFQNIEMHNVKNPIIIDQKYCDGD 364
Query: 267 K 267
K
Sbjct: 365 K 365
>gi|15081600|gb|AAK81876.1| polygalacturonase PG1 [Vitis vinifera]
gi|297739677|emb|CBI29859.3| unnamed protein product [Vitis vinifera]
Length = 444
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/343 (30%), Positives = 165/343 (48%), Gaps = 65/343 (18%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGP 80
A+ +++NV +GA DG +D ++AF +W+ A + G ++VP K YL+ F+GP
Sbjct: 73 ASVKMVNVNYYGAKGDG-SDATEAFKKAWKAACSSPG--SVLVVPKNKNYLLKPITFQGP 129
Query: 81 CKASISFQLQGLLDLFSIDTSLS-----------------LAKGTFHGQGETAWPLNQCH 123
CK+SI+ Q+ G + + ++ S GT +G G+T W N C
Sbjct: 130 CKSSITVQIYGTVQASTDRSAYSNDMTHWLIFENVQNLAVQGGGTINGNGKTWWE-NSCK 188
Query: 124 KNSD--CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-- 178
N D C+ PT + F + + +K +++ H++ C ++ + L ITA +S
Sbjct: 189 VNYDLPCKGAPTALTFYNCKNLAVKNLKIQNAQQMHVSFEKCVGVQASGLTITAPGNSPN 248
Query: 179 -------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDE 207
S+ + V+ + CGPG GIS+GSLG G +
Sbjct: 249 TDGIHVSYTKIIQISSSVIGTGDDCISIVSGSQKVQVNGITCGPGHGISIGSLGSGDSEA 308
Query: 208 EVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
V +TV T + T+NGVR+KTW G ASN F++IVM+NVENPI+IDQ YC +K
Sbjct: 309 HVSDVTVNGATLSGTTNGVRIKTWQGGS-GSASNIKFQNIVMHNVENPIIIDQKYCDQSK 367
Query: 268 CNIKPKDSMPNIEIGNRNLVYNGVNVKVEGPETTSL-CSNVKP 309
K + S ++ N++Y + E SL CS P
Sbjct: 368 -PCKSQSSAVQVQ----NVLYQNIKGTSSSKEAISLDCSAKFP 405
>gi|21530799|emb|CAD21651.2| endo polygalacturonase [Brassica rapa subsp. rapa]
Length = 433
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 149/299 (49%), Gaps = 59/299 (19%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
++V +FGA DG TDD++AF +W++A + +G+ T L+P GK YL+ F GPCK+
Sbjct: 68 TVSVSNFGAKGDGKTDDTQAFKKAWKKACSTNGVT-TFLIPKGKTYLLKSIRFRGPCKSL 126
Query: 85 ISFQLQGLLDLFSIDT----------------SLSL---AKGTFHGQGETAWPLNQCH-- 123
SFQ+ G L + + +LS+ + G G G+ W N C
Sbjct: 127 RSFQILGTLSASTKRSDYGNDKNHWLILEDVNNLSIDGGSAGIVDGNGKIWWQ-NSCKID 185
Query: 124 KNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---- 178
K+ C + PT + L + + ++ +++ I+I C N+ + ++KITA DS
Sbjct: 186 KSKPCTKAPTALTLYNLKNLNVKNLRVRNAQQIQISIEKCNNVDVKNVKITAPGDSPNTD 245
Query: 179 -----------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEV 209
S+++ ++++ CGPG GIS+GSLG V
Sbjct: 246 GIHIVATKNIRISNSDIGTGDDCISIEDGSQNVQINDLTCGPGHGISIGSLGDDNSKAYV 305
Query: 210 VGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
G+ V T + T NGVR+KT+ G A N F++I M+NV+NPI+IDQ YC +KC
Sbjct: 306 SGINVDGATLSETDNGVRIKTYQGGS-GTAKNIKFQNIRMDNVKNPIIIDQNYCDKDKC 363
>gi|255576412|ref|XP_002529098.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223531449|gb|EEF33282.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 387
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 139/287 (48%), Gaps = 50/287 (17%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASISF 87
NV FGA DG TD ++ F A T+ VP G+YL+ EF GPCK+ I+
Sbjct: 25 NVLKFGAKPDGKTDSTQPF-LKAWAAACSSATASTISVPKGRYLIKAIEFRGPCKSRITV 83
Query: 88 QLQGLLD---------------LFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPT 132
++ G ++ LF +S+ GT +G W K+ +
Sbjct: 84 KIDGTIEAPVDYRALGNSGYWILFIQVNQISVLGGTLDAKGAGFWACRASGKSCPVGARS 143
Query: 133 PIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADSS--- 179
I FN+ N+ I+G+ S++S+ H+ I C N+++ ++K+ A H +S
Sbjct: 144 -ITFNWANNVIISGLTSINSQTMHLVINSCNNVQVRNVKLIAPDQSPNTDGIHVQTSTGV 202
Query: 180 --------------------KDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTF 219
+++L+S + CGPG GIS+GSLG+ ++ V +T+ + F
Sbjct: 203 TITGSTLQTGDDCISIGPGTRNLLMSHIKCGPGHGISIGSLGRQFNEDGVQNITLTDAVF 262
Query: 220 TCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYN 266
T + NGVR+KTW N F++++M NV+NPI+IDQ YCP N
Sbjct: 263 TGSDNGVRIKTWARPSTSFVRNVLFQNLIMRNVKNPIIIDQDYCPDN 309
>gi|1212786|emb|CAA65072.1| polygalacturonase [Brassica napus]
gi|1403141|emb|CAA67020.1| endo-polygalacturonidase [Brassica napus]
Length = 433
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 145/298 (48%), Gaps = 59/298 (19%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKASI 85
++V +FGA DG TDD++AF +W++A + +G+ T L+P GK YL+ F GPCK+
Sbjct: 69 VSVSNFGAKGDGKTDDTQAFKKAWKKACSTNGVT-TFLIPKGKTYLLKSIRFRGPCKSLR 127
Query: 86 SFQLQGLLDLFSIDTSLSLAK-------------------GTFHGQGETAWPLNQCH--K 124
SFQ+ G L + + S K G G G W N C K
Sbjct: 128 SFQILGTLSASTKRSDYSNDKNHWLILEDVNNLSIDGGSAGIVDGNGNIWWQ-NSCKIDK 186
Query: 125 NSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----- 178
+ C + PT + L + + ++ +++ I+I C N+ + ++KITA DS
Sbjct: 187 SKPCTKAPTALTLYNLKNLNVKNLRVRNAQQIQISIEKCNNVGVKNVKITAPGDSPNTDG 246
Query: 179 ----------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVV 210
S+++ ++++ CGPG GIS+GSLG V
Sbjct: 247 IHIVATKNIRISNSDIGTGDDCISIEDGSQNVQINDLTCGPGHGISIGSLGDDNSKAYVS 306
Query: 211 GLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
G+ V T + T NGVR+KT+ G A N F++I M+NV+NPI+IDQ YC +KC
Sbjct: 307 GIDVDGATLSETDNGVRIKTYQGGS-GTAKNIKFQNIRMDNVKNPIIIDQNYCDKDKC 363
>gi|224117790|ref|XP_002331632.1| predicted protein [Populus trichocarpa]
gi|222874028|gb|EEF11159.1| predicted protein [Populus trichocarpa]
Length = 391
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 140/309 (45%), Gaps = 58/309 (18%)
Query: 11 VSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWN--WDGIKGTVLVPPG 68
V F+ A+N V NV GA DG D ++AF +W A + W + V VP G
Sbjct: 10 VLFLLFAASYQASNVVYNVVKLGAKPDGKIDSTEAFKKAWTLACSSTWPAM---VYVPKG 66
Query: 69 KYLVSFAEFEGPCKASISFQLQGLL---------------DLFSIDTSLSLAKGTFHGQG 113
+L+ F GPCK I F + G + LF T +++ GT +G
Sbjct: 67 SFLIKPVVFGGPCKNKILFSIDGTIVAPSNYWVFGNSGFWILFYKVTGVTVYGGTIDAKG 126
Query: 114 ETAWPLNQCHKNSDCQLPTPIRFNFLNDSTI--TGIKSVDSRYFHINILGCYNLKLNDLK 171
+ W KN P +F+ S I + + S++S+ FHI+I C+N+ L ++K
Sbjct: 127 GSFWACRNAGKNCP---PGARSMSFVASSNIMVSRLTSINSQMFHISIDQCHNITLENMK 183
Query: 172 ITA----------HADS-----------------------SKDILVSEVFCGPGQGISVG 198
I+A H S SK++ + + CGPG GIS+G
Sbjct: 184 ISAPSWSPNTDGIHMQSSTGISITNSMIKTGDDCISIGPGSKNLRIHRIVCGPGHGISIG 243
Query: 199 SLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVI 258
SL ++ V + V + F T NGVR+K+W G A N FE+I+M V NPI+I
Sbjct: 244 SLALHQNEDGVENVKVTSVVFMGTQNGVRIKSWGRPSTGYARNIVFENIIMKYVYNPIII 303
Query: 259 DQLYCPYNK 267
DQ YCP K
Sbjct: 304 DQNYCPSAK 312
>gi|356553680|ref|XP_003545181.1| PREDICTED: probable polygalacturonase At3g15720-like [Glycine max]
Length = 402
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 110/348 (31%), Positives = 158/348 (45%), Gaps = 65/348 (18%)
Query: 1 LLLAARFSL-LVSFITSVRGIDATNRV--LNVKDFGAVADGITDDSKAFDTSWREAWNWD 57
+L+A F L LVS + R +A + NV D+GA+ DG+TDDS+AF +W
Sbjct: 3 VLIAIFFVLYLVSHCSCSRIREAAINLYTFNVMDYGAIGDGLTDDSQAFLKAWSMVCAMK 62
Query: 58 GIKGTVLVPPGK-YLVSFAEFEGPCK-ASISFQLQG------------------LLDLFS 97
T+ VPPGK +++ +F GPC +S+ FQL+G +D +
Sbjct: 63 NGAATLKVPPGKTFMLKPLQFSGPCSFSSVHFQLEGDVVAPKSTEAWKGQDSSKWIDFSN 122
Query: 98 IDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHI 157
+D + G G G W N C K C PT + N+ +TG + ++S HI
Sbjct: 123 VDGLIIDGGGQIDGSGSVWW--NSC-KVKSCSRPTALSIQNCNNLQLTGTRHLNSARNHI 179
Query: 158 NILGCYNLKLNDLKITAHADS----------SKDILVSE--------------------- 186
+I + + ++ ITA DS S IL+
Sbjct: 180 SINNSNHTHIFNVTITAPQDSPNTDGIDVSQSSYILIQRSTIATGDDCIAMKSGTSYVNI 239
Query: 187 --VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTF 244
+ CGPG GISVGSLGK + V + V NC F NG+R+KTWP G A N F
Sbjct: 240 TGITCGPGHGISVGSLGKKGTCQTVEHVHVNNCNFKGADNGMRIKTWPGG-CGYARNIKF 298
Query: 245 EDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNIEIGNRNLVYNGVN 292
E I++ N +NPI+IDQ Y N++ +D E+ + Y VN
Sbjct: 299 EHILLTNTKNPIIIDQDY-----ENVQNEDKKQTSEVQISGVTYRCVN 341
>gi|413947914|gb|AFW80563.1| hypothetical protein ZEAMMB73_033652 [Zea mays]
Length = 494
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/303 (33%), Positives = 139/303 (45%), Gaps = 64/303 (21%)
Query: 29 VKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGPCKASISF 87
VKDFGAV DG+TDD+ A T+W A DG VL G +LV F GPC+ S++
Sbjct: 98 VKDFGAVGDGVTDDTDALKTAWDTACQDDG-DSVVLAAAGYSFLVHTTVFTGPCQGSVTI 156
Query: 88 QLQGLLD-----------------LFSIDTSLSL-AKGTFHGQGETAWPLN-QCHK---- 124
QL G + LF +SL G G+G+ W L + HK
Sbjct: 157 QLDGAIVAPSDPDTWPANSKRNWLLFYQAHGMSLQGAGLIDGRGQKWWELPCKSHKGQGG 216
Query: 125 ----NSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA------ 174
+ C P +RF N+ T+ G+K +S FHI C + + L I++
Sbjct: 217 SSGHGASCDSPVALRFFMTNNVTVQGLKVQNSPEFHIRFDSCCGVVASGLSISSPALSPN 276
Query: 175 ----HADSSKDIL-----------------------VSEVFCGP-GQGISVGSLGKGIKD 206
H ++++D+L V V CGP G GIS+GSLGK
Sbjct: 277 TDGIHVENTEDVLITNTAVSNGDDCVSIGAGTRNMHVENVTCGPGGHGISIGSLGKQGSR 336
Query: 207 EEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYN 266
V +TVRN + NGVR+KTW G S+ +FE++ M+ V NPI+IDQ YC
Sbjct: 337 ACVANVTVRNAVIRHSDNGVRIKTWQGGS-GAVSSVSFENVRMDAVRNPIIIDQYYCLSK 395
Query: 267 KCN 269
C+
Sbjct: 396 SCD 398
>gi|359483063|ref|XP_003632896.1| PREDICTED: probable polygalacturonase At3g15720-like [Vitis
vinifera]
Length = 403
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 163/357 (45%), Gaps = 69/357 (19%)
Query: 3 LAARFSLLVSFITSVRGI----DATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDG 58
+ RFS + + ++ +A++ + +V ++GAV DG TDDS+AF +W EA N
Sbjct: 9 MKDRFSFFILCMVTLSSFSSTTNASSPLYDVMNYGAVGDGKTDDSQAFLKAWNEACNVQQ 68
Query: 59 IKGTVLVPPGKYLVSFAEFEGPC-KASISFQLQG---------LLD-----LFSIDTSLS 103
+ T+ VP +L++ EF GPC SI FQ+ G L D LFS L+
Sbjct: 69 QRATLNVPARTFLLNPIEFSGPCVPTSIEFQVAGKIIASTNKSLFDNNHWILFSYVKGLT 128
Query: 104 L-AKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGC 162
L GT GQG +W D ++F + + G+ ++ + HI + C
Sbjct: 129 LTGSGTIDGQGAGSW--------QDRTGVAALKFYTCPNLVLQGLTHINPQKAHIILTKC 180
Query: 163 YNLKLNDLKITAHADSSKD---------------------------------ILVSEVFC 189
+N + ITA D+ I ++ V C
Sbjct: 181 DGANINSITITAPEDAPNTDGIDIASSNHVQVQNSKIGTGDDCIAISARCSFINITGVTC 240
Query: 190 GPGQGISVGSLGK-GIKDEEVVG-LTVRNCTFTCT-SNGVRVKTWPDSHIGIASNFTFED 246
GPG GIS+GSLG G D + V + VR+C FT T + G+R+KTW G T+ED
Sbjct: 241 GPGHGISIGSLGDPGSGDFDTVSEVHVRSCNFTGTNTTGIRIKTWQGGQ-GEVKKITYED 299
Query: 247 IVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNIEIGNRNLVYNGVNVKVEGPETTSL 303
I+ +NV PIVIDQ YCP+N C K++ + ++ Y G+ G E SL
Sbjct: 300 IMFDNVRYPIVIDQFYCPHNVC----KNNTGTSAVAISDVSYTGIIGTSSGDEVMSL 352
>gi|356503135|ref|XP_003520367.1| PREDICTED: probable polygalacturonase At3g15720-like [Glycine max]
Length = 452
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 142/296 (47%), Gaps = 63/296 (21%)
Query: 20 IDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFE 78
+ N + NV DFGAV DG TDD++AF +W+ G T+L+PP K +LV+ +
Sbjct: 88 VGTQNTIYNVIDFGAVGDGKTDDTQAFLKAWQSMCEAQGTS-TLLIPPNKVFLVTSMLLK 146
Query: 79 GPCKA-SISFQLQGLLDLFSIDT------------------SLSLAKGTFHGQGETAWPL 119
GPC A S+ QLQG++ + D ++ + G G G W
Sbjct: 147 GPCVAPSVQIQLQGVIVAPTKDAWVEGNLNTLIMISNVNGLTIDGSGGLIDGYGSAWWAC 206
Query: 120 NQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS- 178
C + P+ + N N ++T + ++S HI++ GC + + I+A DS
Sbjct: 207 KSCPR------PSVLIINSCNSVSVTNLNMINSPKSHIHVNGCEGATFSHINISAPGDSP 260
Query: 179 ---------SKDILVSE-----------------------VFCGPGQGISVGSLGKGIKD 206
SK+I++ + + CGPG GIS+GSLGK K
Sbjct: 261 NTDGFDISTSKNIMIEDSTIATGDDCIAISGGSSYINVTGIACGPGHGISIGSLGK--KF 318
Query: 207 EEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLY 262
+ V + VRNC+F T+NG R+KT+P+ +G A TFEDI + NPI+IDQ Y
Sbjct: 319 DTVQEVYVRNCSFIRTTNGARIKTFPNG-MGYAKQITFEDITLEQTRNPIIIDQEY 373
>gi|225443001|ref|XP_002266960.1| PREDICTED: probable polygalacturonase At3g15720 [Vitis vinifera]
gi|297743436|emb|CBI36303.3| unnamed protein product [Vitis vinifera]
Length = 391
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 138/295 (46%), Gaps = 56/295 (18%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS- 84
+NV+DFGA+ DG TDDS+AF +W++A ++ GK +L+ FEGPC+AS
Sbjct: 20 INVRDFGAIGDGTTDDSQAFLKAWKKACGIQAGYVNFIIESGKAFLLKPIRFEGPCRASY 79
Query: 85 ISFQLQGL------------------LDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNS 126
I+ Q+ G L F I+ + KGT +GQG W Q KN+
Sbjct: 80 INIQVLGTITAPKSIYEWGGQSVDNWLIFFRINGLIVNGKGTINGQGSIWW--QQLPKNN 137
Query: 127 DCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-------- 178
+ F N+ + + ++S H+ I +++L I A +S
Sbjct: 138 LFHPLDALSFVGCNNLKLDHLNLINSPRRHVVIFNINGATISNLNIIAPKESPNTDGIDI 197
Query: 179 -------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLT 213
S I +S + CGPG GIS+GSLG + ++V +
Sbjct: 198 GQSTNIQLHYCNIKTGDDCIAIGPSSFYINISNIACGPGHGISIGSLGLNGRTDKVEEVQ 257
Query: 214 VRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
VR+CTFT T NGVR+KTW G A FE I +N +NPI+IDQ YCP N C
Sbjct: 258 VRDCTFTGTRNGVRIKTWEGGS-GYARKILFEGITLNAADNPIIIDQYYCPNNMC 311
>gi|359481676|ref|XP_003632658.1| PREDICTED: polygalacturonase-like [Vitis vinifera]
Length = 368
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 159/332 (47%), Gaps = 64/332 (19%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
++NV +GA DG +D ++AF +W+ A + G ++VP K YL+ F+GPCK+S
Sbjct: 1 MVNVNYYGAKGDG-SDATEAFKKAWKAACSSPG--SVLVVPKNKNYLLKPITFQGPCKSS 57
Query: 85 ISFQLQGLLDLFSIDTSLS-----------------LAKGTFHGQGETAWPLNQCHKNSD 127
I+ Q+ G + + ++ S GT +G G+T W N C N D
Sbjct: 58 ITVQIYGTVQASTDRSAYSNDMTHWLIFENVQNLAVQGGGTINGNGKTWWE-NSCKVNYD 116
Query: 128 --CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------ 178
C+ PT + F + + +K +++ H++ C ++ + L ITA +S
Sbjct: 117 LPCKGAPTALTFYNCKNLAVKNLKIQNAQQMHVSFEKCVGVQASGLTITAPGNSPNTDGI 176
Query: 179 ---------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVG 211
S+ + V+ + CGPG GIS+GSLG G + V
Sbjct: 177 HVSYTKIIQISSSVIGTGDDCISIVSGSQKVQVNGITCGPGHGISIGSLGSGDSEAHVSD 236
Query: 212 LTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK 271
+TV T + T+NGVR+KTW G ASN F++IVM+NVENPI+IDQ YC +K K
Sbjct: 237 VTVNGATLSGTTNGVRIKTWQGGS-GSASNIKFQNIVMHNVENPIIIDQKYCDQSK-PCK 294
Query: 272 PKDSMPNIEIGNRNLVYNGVNVKVEGPETTSL 303
+ S ++ N++Y + E SL
Sbjct: 295 SQSSAVQVQ----NVLYQNIKGTSSSKEAISL 322
>gi|255577475|ref|XP_002529616.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223530901|gb|EEF32761.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 474
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 152/320 (47%), Gaps = 58/320 (18%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK 60
L+L L ++ V + + +V FGA ADG +DD+KAF +W+ A + G
Sbjct: 82 LILMRANVLDLNIFDKVGTTSTSAKTFSVDAFGAKADG-SDDTKAFQEAWKAACSSAG-- 138
Query: 61 GTVLVPPGKYLVSFAEFEGPCKASISFQLQGLLD-----------------LFSIDTSLS 103
++VP YL+ F GPCK++++ Q+ G ++ + L
Sbjct: 139 SVLVVPDNNYLIKPIRFSGPCKSNLTLQIYGTIEASDDRSDYEEDDRHWIVFERVQNFLV 198
Query: 104 LAKGTFHGQGETAWPLNQCHKNSD--CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINIL 160
GT G G+ W N C N D C+ PT + F + + +K +++ H++
Sbjct: 199 EGGGTIDGNGKIWWQ-NSCKLNKDLPCKDAPTALTFYKCKNLVVENLKIQNAQQMHVSFQ 257
Query: 161 GCYNLKLNDLKITA----------HADSSKDILVSE-----------------------V 187
G N+K+++L +T+ H S+++I +++ +
Sbjct: 258 GSKNVKISNLIVTSPEESPNTDGIHVTSTQNIQITDCVIGTGDDCISIVSGSQNVQAMNI 317
Query: 188 FCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDI 247
CGPG GIS+GSLG G V G+T+ + T+NGVR+KTW G ASN F++I
Sbjct: 318 TCGPGHGISIGSLGSGNSKAHVSGVTINGAKLSGTTNGVRIKTWQGGS-GNASNIKFQNI 376
Query: 248 VMNNVENPIVIDQLYCPYNK 267
M+NV NPI+IDQ YC +K
Sbjct: 377 KMDNVSNPIIIDQNYCDQDK 396
>gi|357450573|ref|XP_003595563.1| Polygalacturonase [Medicago truncatula]
gi|355484611|gb|AES65814.1| Polygalacturonase [Medicago truncatula]
Length = 391
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 170/398 (42%), Gaps = 93/398 (23%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK 60
L A FS+L F TS +NV FGA +DG D +K F ++W A
Sbjct: 10 FLFLATFSIL--FETS------NAASINVASFGAKSDGTQDSTKPFLSAWSLACK-SNEA 60
Query: 61 GTVLVPPGKYLVSFAEFEGPCKASISFQLQGLL---------------DLFSIDTSLSLA 105
T+ VP G +L+ F GPC I F++ G + LF +S+
Sbjct: 61 STIYVPQGSFLLKQVSFWGPCLNKIDFKIDGTIVAPSKYESLGNSGYWILFMKVNWVSIY 120
Query: 106 KGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNL 165
GTF G+G W + ++ + I F++ + ++G+ S++S+ HI + C N+
Sbjct: 121 GGTFDGKGAGYWRCRKAGRSCPAAARS-ISFSWSKNVLVSGLTSLNSKAIHIAVDHCKNV 179
Query: 166 KLNDLKITAHADS---------------------------------SKDILVSEVFCGPG 192
+ D+KI A + S + + + + CGPG
Sbjct: 180 VIKDVKIRAPSRSPNTDGINVQFSTGVTISHSTIMTGDDCISINQGTTHVWIDRIACGPG 239
Query: 193 QGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNV 252
GIS+GSLG + V +TV + FT T NGVR+K+W + G A + F +++M NV
Sbjct: 240 HGISIGSLGSDSNEAGVENVTVTDSVFTKTQNGVRIKSWAKPNNGYARDINFRNLIMQNV 299
Query: 253 ENPIVIDQLYCPYNKC---------------NIKPKDSMP--------------NIEIGN 283
PI+IDQ YC C +IK + P +++ +
Sbjct: 300 YYPIIIDQRYCTKTDCPHQNSGVKISSVSYQHIKGTSASPVAIKFDCSQSNPCLGLKLQD 359
Query: 284 RNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 321
NL+Y ++G +T+S C N + G IP +C+
Sbjct: 360 INLIY------LKGSKTSSSCRNAGGSTLGLVIPKSCL 391
>gi|22327096|ref|NP_198105.2| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|332006314|gb|AED93697.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 458
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 106/311 (34%), Positives = 148/311 (47%), Gaps = 73/311 (23%)
Query: 6 RFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLV 65
R S+L++FI G+ ++ NV FGA DG TDDS AF +W + T+ +
Sbjct: 35 RISILINFI--CFGL-VNGQIYNVLKFGAEGDGQTDDSNAFLQAWNATCGGEENINTLFI 91
Query: 66 PPGK-YLVSFAEFEGPCKA-SISFQLQGLLDLFSIDTSLSLAK----------------- 106
P GK YL+ EF+GPCK+ SI QL G++ S TS S K
Sbjct: 92 PSGKTYLLQPIEFKGPCKSTSIKLQLDGIIVAPSNITSWSNPKSQTWISFSGVPGLMIDG 151
Query: 107 -GTFHGQGETAW-PLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYN 164
GT +G+G + W L+ C+ N+ TI GI S+DS HI+I C+
Sbjct: 152 SGTINGRGSSFWEALHICN---------------CNNLTINGITSIDSPKSHISIKNCHY 196
Query: 165 LKLNDLKITAHADS---------------------------------SKDILVSEVFCGP 191
+ ++ + I A +S S I +++V CGP
Sbjct: 197 VAISKINILAPENSPNTDGIDISYSTNVNIFDSTIQTGDDCIAINTGSSSINITQVNCGP 256
Query: 192 GQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNN 251
G GISVGSLG ++ V + V CTF T+NG R+KTW G A N +FE+I + N
Sbjct: 257 GHGISVGSLGADGENAAVSDVYVTQCTFNKTTNGARIKTWQGGQ-GYARNISFENITLIN 315
Query: 252 VENPIVIDQLY 262
V+NPI+IDQ Y
Sbjct: 316 VQNPIIIDQQY 326
>gi|297801608|ref|XP_002868688.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297314524|gb|EFH44947.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 410
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 159/350 (45%), Gaps = 49/350 (14%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK 60
+L+ + + S + ++ NV ++GA+ DG +DDSKAF +W + N+ G +
Sbjct: 10 FILSLTLFHIFQLVQSHYSLYHESKSFNVLNYGAIGDGFSDDSKAFKDAWEDTCNYIGSQ 69
Query: 61 GTVLVPPG-KYLVSFAEFEGPCKA-SISFQLQGLLDLFSIDTSLSLAKGTFHGQGETAWP 118
T+ +P G +L+ EF GPCK+ I + G L K H E
Sbjct: 70 STMEIPEGYTFLLQPIEFHGPCKSKKIILSISGNLIAPESPYEWECKKDHCHKWIEFG-H 128
Query: 119 LNQCHKNSDCQL-----PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKIT 173
+N H N L P + + ++ I+ I DS F +++ + + L IT
Sbjct: 129 INGLHINGHGTLACLKRPRGVVISHSSNVHISNIMVKDSPNFQMSLEDSKWVIVKQLTIT 188
Query: 174 AHADS---------------------------------SKDILVSEVFCGPGQGISVGSL 200
A DS SK + +S + CGPG GIS+GSL
Sbjct: 189 ADGDSPNTDGIHIQRSQNVIVYESNIRTGDDCISIGDGSKYVNISRISCGPGHGISIGSL 248
Query: 201 GKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQ 260
G+ E V + VR+CTF T+NGVR+KTW G N FE I ++ PI+IDQ
Sbjct: 249 GRYGTKETVENVVVRDCTFRETTNGVRIKTWQGGR-GHVRNVLFERIKLHGATRPIIIDQ 307
Query: 261 LYCPYNKCNIKPKDSMPNIEIGNRNLVYNGVN-VKVEGPETTSLCSNVKP 309
YCP+++C K+ +EI +N++YN ++ ++ P LCS P
Sbjct: 308 FYCPHSQC----KNHTRAVEI--KNVMYNHIHGTSIKKPFVQLLCSKSVP 351
>gi|148909947|gb|ABR18059.1| unknown [Picea sitchensis]
Length = 493
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 143/302 (47%), Gaps = 57/302 (18%)
Query: 20 IDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFE 78
+ ++ V+ V +FGA DG DD+KAF+ +W +A + LVP GK YLV +F
Sbjct: 82 VPRSSNVVCVDEFGAKGDGENDDTKAFNNAWSKACS--SAPAVFLVPHGKKYLVKPIKFS 139
Query: 79 GPCKASISFQLQGL------------------LDLFSIDTSLSLAKGTFHGQGETAWPLN 120
GPCK++++ Q+ G L +D G F+G GE W +
Sbjct: 140 GPCKSALTMQVSGTIIAPADPRVWDGLNRRQWLRFKEVDDLTVEGGGIFYGSGEQWWAES 199
Query: 121 -QCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA---- 174
+ +K + C+ PT I F N+ + + +S+ HI C +K ++LK+ A
Sbjct: 200 CKINKTNPCRPAPTAITFELCNNLRVMNLIVQNSQQMHIKFRKCVGVKADNLKVLAPGHS 259
Query: 175 ------HADSSKDI---------------LVSEVF--------CGPGQGISVGSLGKGIK 205
H +SKD+ +VS+ F CGPG GIS+GSLG+G
Sbjct: 260 PNTDGIHVSASKDVVIKNTITGTGDDCISIVSDSFNIYIENITCGPGHGISIGSLGEGSA 319
Query: 206 DEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPY 265
V + V T+NG+R+KTW S G A F+++ M NV++PI+IDQ YC
Sbjct: 320 KARVADVMVHGAFLHNTTNGLRIKTWQGSS-GSARRILFQNVHMENVKHPIIIDQYYCDS 378
Query: 266 NK 267
K
Sbjct: 379 KK 380
>gi|414877180|tpg|DAA54311.1| TPA: polygalacturonase [Zea mays]
Length = 499
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 136/301 (45%), Gaps = 62/301 (20%)
Query: 29 VKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASISFQ 88
VKDFGAV DG+TDD+ A T+W A DG + +LV F GPC+ S++ Q
Sbjct: 104 VKDFGAVGDGVTDDTGAIKTAWDTACQDDGASVVLAAAGYSFLVHTTVFTGPCQGSVTIQ 163
Query: 89 LQGLLD-----------------LFSIDTSLSL-AKGTFHGQGETAWPLN-QCHK----- 124
L G + LF +SL G G+G+ W L + HK
Sbjct: 164 LDGTIVAPSDPDMWPANSKRNWLLFYQAHGMSLRGAGLIDGKGQKWWDLPCKSHKGQGGS 223
Query: 125 ---NSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA------- 174
+ C P +RF N+ T+ G+K +S FHI C + + L I++
Sbjct: 224 SGHGASCDSPVALRFFMTNNVTVQGLKVQNSPEFHIRFDSCRGVVASGLSISSPALSPNT 283
Query: 175 ---HADSSKDIL-----------------------VSEVFCGP-GQGISVGSLGKGIKDE 207
H ++++D+L V V CGP G GIS+GSLGK
Sbjct: 284 DGIHVENTQDVLITNTAVSNGDDCVSIGAGTLNMHVENVTCGPGGHGISIGSLGKQGSRA 343
Query: 208 EVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
V +TVRN + NGVR+KTW G S+ +F+++ M+ V NPI+IDQ YC
Sbjct: 344 CVANVTVRNAVIRHSDNGVRIKTWQGGS-GAVSSVSFQNVRMDAVRNPIIIDQYYCLSKS 402
Query: 268 C 268
C
Sbjct: 403 C 403
>gi|224092836|ref|XP_002309716.1| predicted protein [Populus trichocarpa]
gi|222852619|gb|EEE90166.1| predicted protein [Populus trichocarpa]
Length = 391
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 141/290 (48%), Gaps = 53/290 (18%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKA-SIS 86
+V +GA+ DG TD +KAF +W +A T+ VP G + + F+GPCK +I
Sbjct: 28 SVLSYGAMPDGKTDSTKAFAAAWSQACA-STQPATISVPKGSFALGQVRFQGPCKNNAIL 86
Query: 87 FQLQGLLD---------------LFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDC-QL 130
++ G L +F ++++ GT GQG W K DC
Sbjct: 87 VRIDGTLLAPSDYGVLGRAQNWLIFEHVNGVTISGGTLDGQGAGLWSCKNSGK--DCPSG 144
Query: 131 PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------ 178
T + F+ N+ ITG+ S++S+ FHI I C ++K+ ++++A DS
Sbjct: 145 ATSLEFSNSNNIAITGLASLNSQMFHIVINACQDVKVQGVRVSAAGDSPNTDGIHVQSST 204
Query: 179 ---------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNC 217
+ ++ + V CGPG GIS+GSLGK ++ V +TV+
Sbjct: 205 GVTILNSRIGTGDDCVSIGPGTSNLWIENVACGPGHGISIGSLGKDSQEAGVQNVTVKTT 264
Query: 218 TFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
TFT T NGVR+KTW G A N F+ VM NV+NPIVIDQ YCP K
Sbjct: 265 TFTGTENGVRIKTWGRPSSGFARNILFQHAVMTNVQNPIVIDQNYCPGEK 314
>gi|326497563|dbj|BAK05871.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 400
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 133/287 (46%), Gaps = 48/287 (16%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGI-KGTVLVPPGKYLVSFAEFEGPCK-ASI 85
+V D+GAVADG TD + AF +W A +G V+VP G++LVS A F GPC+ ++
Sbjct: 25 SVVDYGAVADGQTDCAGAFLRAWSAACAAEGEGPAAVVVPAGEFLVSRARFSGPCRGGTV 84
Query: 86 SFQLQG------------LLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPT- 132
+ + G L +F +S+ GT G+G+ W + S C T
Sbjct: 85 AVNISGTVLAPVPYAGVQLWIVFQNVDGVSVTGGTLDGRGQAYWACRRAGSGSSCPAATR 144
Query: 133 PIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-------------- 178
+ + I G+ S++S H+ + + + D ++A DS
Sbjct: 145 SLTIYRSRNVVIQGLTSLNSAGIHVTVQASTGVAILDTVVSAPGDSPNTDGIHIKQSSNV 204
Query: 179 -------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTF 219
S D+ + V CGPG GIS+GSLG + V +TV+ T
Sbjct: 205 TIRDAVIGTGDDCISMVEGSSDVWIQGVRCGPGHGISIGSLGDTPEQVAVRNITVKAVTL 264
Query: 220 TCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYN 266
T+NG+R+K W ++ G+ F D+VM +V NPI+IDQ YCP N
Sbjct: 265 AGTTNGLRIKWWVKANRGLVDGVEFSDVVMRDVRNPIIIDQNYCPGN 311
>gi|296083401|emb|CBI23356.3| unnamed protein product [Vitis vinifera]
Length = 390
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 142/311 (45%), Gaps = 55/311 (17%)
Query: 7 FSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP 66
++ + FI ++ V +VK FGA DG++D +KAF + A + VP
Sbjct: 6 YTFIAKFIVKIK----VRAVYDVKSFGAKPDGLSDSTKAF-LNAWAAACASTASSIIFVP 60
Query: 67 PGKYLVSFAEFEGP--CKASISFQLQGLLDL---------------FSIDTSLSLAKGTF 109
G+YL+ A F G A I+ + G L F + +S+ G F
Sbjct: 61 KGRYLLHPAVFSGRYCTSARITILINGTLVAPADYRILGKANNWLSFEGVSGVSILGGAF 120
Query: 110 HGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLND 169
+G W T + F N+ I G+ S++S+ FHI I GC N++L
Sbjct: 121 DAKGPALWACKAAGNQHCPSGATTLSFTNSNNIMIKGMLSLNSQMFHIVINGCSNVRLQG 180
Query: 170 LKITAHADS---------------------------------SKDILVSEVFCGPGQGIS 196
+ I A +S +K++ + + CGPG GIS
Sbjct: 181 VNIIASGNSPNTDGIHVQRSTNIAIIRSTIRTGDDCISIGPGTKNLWMEGIECGPGHGIS 240
Query: 197 VGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPI 256
+GSL K +++E V +TV+N FT T NG+R+K+W + G FE + M+NV++PI
Sbjct: 241 IGSLAKDLEEEGVQNVTVKNAAFTGTQNGLRIKSWARASTGFVKGVHFEGVTMDNVQSPI 300
Query: 257 VIDQLYCPYNK 267
VIDQ YCP+N+
Sbjct: 301 VIDQNYCPHNQ 311
>gi|1346704|sp|P48978.1|PGLR_MALDO RecName: Full=Polygalacturonase; Short=PG; AltName: Full=Pectinase;
Flags: Precursor
gi|456092|gb|AAA74452.1| poly [1,4-a-D-galacturonide] glycan hydrolase [Malus x domestica]
Length = 460
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 157/342 (45%), Gaps = 62/342 (18%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPC 81
A + ++V DFGA +G DD++AF +W+ A + G ++VP YLV EF GPC
Sbjct: 94 APAKTISVDDFGAKGNG-ADDTQAFVKAWKAACSSSGAM-VLVVPQKNYLVRPIEFSGPC 151
Query: 82 KASISFQLQGLLD---------------LF-SIDTSLSLAKGTFHGQGETAWPLNQCHKN 125
K+ ++ Q+ G ++ +F ++ L + GT +G G W N C
Sbjct: 152 KSQLTLQIYGTIEASEDRSIYKDIDHWLIFDNVQNLLVVGPGTINGNGNIWWK-NSCKIK 210
Query: 126 SD----CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--- 178
PT + FN N+ + + D++ H+ C N++ + L +TA DS
Sbjct: 211 PQPPCGTYAPTAVTFNRCNNLVVKNLNIQDAQQIHVIFQNCINVQASCLTVTAPEDSPNT 270
Query: 179 ------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEE 208
S+ + +++ CGPG GIS+GSLG+ ++
Sbjct: 271 DGIHVTNTQNITISSSVIGTGDDCISIVSGSQRVQATDITCGPGHGISIGSLGEDGSEDH 330
Query: 209 VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
V G+ V + TSNG+R+KTW G A+N F+++ MN+V NPI+IDQ YC +
Sbjct: 331 VSGVFVNGAKLSGTSNGLRIKTWKGGS-GSATNIVFQNVQMNDVTNPIIIDQNYCDHKTK 389
Query: 269 NIKPKDSMPNIEIGNRNLVYNGVN-VKVEGPETTSLCSNVKP 309
+ K + S + +N++Y + G T CS P
Sbjct: 390 DCKQQKSAVQV----KNVLYQNIRGTSASGDAITLNCSQSVP 427
>gi|357142175|ref|XP_003572483.1| PREDICTED: LOW QUALITY PROTEIN: exopolygalacturonase-like
[Brachypodium distachyon]
Length = 465
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 160/375 (42%), Gaps = 84/375 (22%)
Query: 17 VRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAE 76
V G + V +V +GA + G D+ +AF T+WR A TVLVP G +++ E
Sbjct: 22 VHGQNNGAAVHDVTVYGA-SPGSKDNKRAFLTAWRAACGSTAGNATVLVPEGAFVIGAVE 80
Query: 77 FEGPCK--ASISFQLQGLLD---------------LFSIDTSLSL-AKGTFHGQGETAWP 118
F GPC+ A I+ + G+L FS ++L L GT G G
Sbjct: 81 FSGPCRDDAPIAVVIDGVLRPCASDGCHLSSDAWITFSHVSNLLLTGAGTLDGAGARRRK 140
Query: 119 LNQCHKNS-----------------DCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILG 161
NS L + + + +T+ G+ DSR FH++I
Sbjct: 141 HKTNVYNSLRWITEVXXVLYLLRVTYFSLTQTLVLDGVASATVRGLAFTDSRGFHVSIHR 200
Query: 162 CYNLKLNDLKITAHADS---------------------------------SKDILVSEVF 188
++ L+I+A A S S D+LVS V
Sbjct: 201 STHVSAQSLRISAPATSRNTDGVHVGFSKHVSILGSAIGTGDDCVSIGPGSTDVLVSGVS 260
Query: 189 CGPGQGISVGSLGKGIKD------EEVVGLTVRNCTFTCTSNGVRVKTWPDSHIG----- 237
CGPG GIS+GSLGK + +EV G+ VRNCT T+NGVR+KTWP
Sbjct: 261 CGPGHGISIGSLGKHKPNNNNGGGDEVRGVVVRNCTVKGTANGVRIKTWPGPPSSSSAPA 320
Query: 238 --IASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNIEIGNRNLVYNGVNVKV 295
+A N TFED+ M V+NP+VIDQ YCP+ C P++ + +V+ +
Sbjct: 321 GGLAYNITFEDVAMAGVQNPVVIDQHYCPHGSCGGATARGRPSL-VQISEVVFRRIRGTA 379
Query: 296 EGPETTSL-CSNVKP 309
G L CS +P
Sbjct: 380 SGEVAVRLRCSEARP 394
>gi|134305344|gb|ABO71786.1| polygalacturonase [Cucumis melo]
Length = 393
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 135/290 (46%), Gaps = 50/290 (17%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKA-SI 85
++ + GA DG TD S A ++W A + + TV VP G++ V F GPC SI
Sbjct: 27 FDIVNLGAKPDGKTDASHALQSAWARACS-STVASTVYVPKGRFYVQSGNFIGPCNYNSI 85
Query: 86 SFQLQGLLDL---------------FSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQL 130
+F + G L FS +LS+ G GQG T W N+
Sbjct: 86 TFLINGTLVASSNFKVLAKSRTWISFSRINALSIYGGILDGQGTTLWACKNSGINTCSLG 145
Query: 131 PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADSSK 180
T + + + I G+ SV+S+ +HI + C ++++ +K+ A H + S
Sbjct: 146 ATTLEVSDSQNILINGLSSVNSQMYHIVVYDCQDVRIQGVKVLAASNSPNTDGIHVERSS 205
Query: 181 DILV-----------------------SEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNC 217
++ + + CGPG GIS+GSLGK ++ V +T++
Sbjct: 206 NVTILNSNIRTGDDCISIGPGTSHLWMERLACGPGHGISIGSLGKWWEEAGVENVTLKTA 265
Query: 218 TFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
F T NGVR+K+W G A N F+ IV +NV NP++IDQ YCP+N+
Sbjct: 266 HFNGTMNGVRIKSWGRPSNGFAKNILFQHIVFDNVNNPLIIDQNYCPHNQ 315
>gi|15230328|ref|NP_191310.1| Polygalacturonase ADPG1 [Arabidopsis thaliana]
gi|75318074|sp|O23147.1|ADPG1_ARATH RecName: Full=Polygalacturonase ADPG1; Short=AtADPG1; Short=PG
ADPG1; AltName: Full=Pectinase ADPG1; AltName:
Full=Protein ARABIDOPSIS DEHISCENCE ZONE
POLYGALACTURONASE 1; Flags: Precursor
gi|2597824|emb|CAA05525.1| endo-polygalacturonase [Arabidopsis thaliana]
gi|4090973|gb|AAC98923.1| endo-polygalacturonase [Arabidopsis thaliana]
gi|6706422|emb|CAB66108.1| endo-polygalacturonase [Arabidopsis thaliana]
gi|26450946|dbj|BAC42580.1| putative endo-polygalacturonase [Arabidopsis thaliana]
gi|28951033|gb|AAO63440.1| At3g57510 [Arabidopsis thaliana]
gi|332646143|gb|AEE79664.1| Polygalacturonase ADPG1 [Arabidopsis thaliana]
Length = 431
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 162/321 (50%), Gaps = 64/321 (19%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
++V +FGA DG TDD++AF +W++A + +G+ T LVP GK YL+ F GPCK+
Sbjct: 67 TVSVSNFGAKGDGKTDDTQAFKKAWKKACSTNGVT-TFLVPKGKTYLLKSTRFRGPCKSL 125
Query: 85 ISFQLQGLLDLFSIDT---------------SLSL---AKGTFHGQGETAWPLNQCH--K 124
+FQ+ G L + + +LS+ + G +G G+T W N C K
Sbjct: 126 RNFQILGTLSASTKRSDYKDKNHWLILEDVNNLSIDGGSTGIINGNGKTWWQ-NSCKIDK 184
Query: 125 NSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----- 178
+ C + PT + L + + ++ +++ I+I C +++++++ITA DS
Sbjct: 185 SKPCTKAPTALTLYNLKNLNVKNLRVKNAQQIQISIEKCNKVEVSNVEITAPGDSPNTDG 244
Query: 179 -----SKDILVS-----------------------EVFCGPGQGISVGSLGKGIKDEEVV 210
+++I VS ++ CGPG GIS+GSLG V
Sbjct: 245 IHITNTQNIRVSNSDIGTGDDCISIEDGTQNLQIFDLTCGPGHGISIGSLGDDNSKAYVS 304
Query: 211 GLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNI 270
G+ V F+ + NGVR+KT+ G A N F++I M NV+NPI+IDQ YC +KC
Sbjct: 305 GINVDGAKFSESDNGVRIKTYQGGS-GTAKNIKFQNIRMENVKNPIIIDQDYCDKDKC-- 361
Query: 271 KPKDSMPNIEIGNRNLVYNGV 291
+D +++ +N+VY +
Sbjct: 362 --EDQESAVQV--KNVVYKNI 378
>gi|147785372|emb|CAN64004.1| hypothetical protein VITISV_043286 [Vitis vinifera]
Length = 442
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 164/345 (47%), Gaps = 69/345 (20%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG--KYLVSFAEFEG 79
A+ + ++V D+GA DG +D ++AF +W A + +G+VLV P YL+ FEG
Sbjct: 71 ASVKTVSVNDYGAKGDG-SDATEAFKKAWEAACS---SQGSVLVVPXXKNYLLKPITFEG 126
Query: 80 PCKASISFQLQGLLDL------FSIDTSLSL-----------AKGTFHGQGETAWPLNQC 122
PCK+SI+ Q+ G + +S D + L GT +G G+T W N C
Sbjct: 127 PCKSSITVQIYGTVQASADRSAYSNDMTRWLVFENVQNLAVQGGGTINGNGKTWWE-NSC 185
Query: 123 HKNSD--CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS- 178
N D C+ PT + F + + +K +++ H++ C ++ + L +TA DS
Sbjct: 186 KVNDDLSCKDAPTALTFYNCKNLVVKNLKIQNAQQMHVSFEKCVGVQASGLTVTAPGDSP 245
Query: 179 --------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKD 206
++++ + + CGPG GIS+GSLG G +
Sbjct: 246 NTDGIHVTDTQNIQISSSVIGTGDDCISIVSGTQNLQATGITCGPGHGISIGSLGSGNSE 305
Query: 207 EEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYN 266
V +TV T + T+NGVR+KTW G ASN F++I M+NV NPI+IDQ YC +
Sbjct: 306 AHVSDITVNGATLSGTTNGVRIKTWQGGS-GSASNIKFQNIEMHNVXNPIIIDQKYCDQD 364
Query: 267 K-CNIKPKDSMPNIEIGNRNLVYNGVNVKVEGPETTSL-CSNVKP 309
K C + + + +N++Y + E L CSB P
Sbjct: 365 KPCKSQSR------AVQVQNVLYQNIKGTSSSXEAIQLDCSBKFP 403
>gi|5734763|gb|AAD50028.1|AC007651_23 Similar to polygalacturonase [Arabidopsis thaliana]
Length = 369
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 178/386 (46%), Gaps = 97/386 (25%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK 60
+ +A LL+ +T+ R I +V +V+ +GA DG D +F I
Sbjct: 15 VFMAFGLLLLLIAVTTSRPITRP-KVFDVRSYGAKGDGPCDGKISF-----------VID 62
Query: 61 GTVLVPPGKYLVSFAEFEGPCKASISFQLQGLLDLFSIDTSLSLAKGTFHGQGETAWPLN 120
GT+L PP + + I+F+ L +F GT GQG+ +W L
Sbjct: 63 GTLLAPPNNDDIKKEIW-------INFRYINYLTVF--------GDGTLDGQGKKSWSLI 107
Query: 121 QCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS- 178
C K+++C +L + F+F+ +S++ GI S++S+ H N L + + + I A ++S
Sbjct: 108 DCQKDNNCPKLAINMGFDFVKNSSMNGITSLNSKAGHFNFLSVDHFSITRVNIIAPSNSP 167
Query: 179 ---------SKDILVSE-----------------------VFCGPGQGISVGSLGKGIKD 206
S ++ +S V CGPG GIS+GSLGK +
Sbjct: 168 NTDGIKIALSSNMQISNTHISTGDDCIAMLSGNTNFDIYNVKCGPGHGISIGSLGKNKDE 227
Query: 207 EEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIA-SNFTFEDIVMNNVENPIVIDQLYCPY 265
+ V GL VRN FT T+NG+R+KTW S I N +E++ M NVENPI IDQ YCPY
Sbjct: 228 KNVNGLMVRNSVFTGTTNGIRIKTWESSASTIRIINLVYENLQMINVENPIGIDQKYCPY 287
Query: 266 NKC-----------NIKPKD-----------------SMP--NIEIGNRNLVYNGVNVKV 295
C N+ K+ + P ++++ + NL ++G V
Sbjct: 288 PPCSNMGDSHIQIRNVTLKNIWGTSKNKVAVKFQCSKTFPCKDVQLIDINLTHHG----V 343
Query: 296 EGPETTSLCSNVKPTLFGKQIPATCV 321
+GP ++LC NV + GK +P C+
Sbjct: 344 DGP-ASALCENVDGSATGKMVPPHCL 368
>gi|242079727|ref|XP_002444632.1| hypothetical protein SORBIDRAFT_07g025130 [Sorghum bicolor]
gi|241940982|gb|EES14127.1| hypothetical protein SORBIDRAFT_07g025130 [Sorghum bicolor]
Length = 421
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 141/293 (48%), Gaps = 53/293 (18%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCK--A 83
V +V ++GA A D+ AF +WR A + T+ P G + V EFEGPC+
Sbjct: 35 VYDVTEYGA-APSNRDNKDAFLAAWRAACDSTAGNATLHFPKGTFAVGAVEFEGPCRNGG 93
Query: 84 SISFQLQGLLD-----LFSIDTSLSLA----------KGTFHGQGETAWPLNQCHKNSDC 128
+ + + G+L S D ++ + GT GQG A + K+
Sbjct: 94 APAVVIDGVLQPCAGCRLSSDAWITFSGLNNLLVTGDGGTLDGQG--AGSDDDKVKSKSK 151
Query: 129 QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---------- 178
T + F+ + +ST+ G+ V+SR FH+NI + L I A A S
Sbjct: 152 TTTTTLVFDGVTNSTLRGLAFVNSRGFHVNIRRSSRVVAEGLGIHAPAHSRNTDGVHVGL 211
Query: 179 ------------SKDILVS-----------EVFCGPGQGISVGSLGKGIKDEEVVGLTVR 215
+ D VS V CGPG G+SVGSLGK +E+V GL ++
Sbjct: 212 SSHIRVLDSVIGTGDDCVSVGPGSVDVVVDGVICGPGHGLSVGSLGKEEGEEDVQGLIIK 271
Query: 216 NCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
NCT T+NGVR+KTWP S ASN TF+DI M+ V NPI+IDQ YCP++ C
Sbjct: 272 NCTVKGTTNGVRIKTWPGSPPSRASNITFQDITMDGVANPIIIDQRYCPHDHC 324
>gi|3320458|gb|AAC26510.1| polygalacturonase precursor [Cucumis melo]
Length = 393
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 134/290 (46%), Gaps = 50/290 (17%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKA-SI 85
++ + GA DG TD S A ++W A + + TV VP G++ V F GPC SI
Sbjct: 27 FDIVNLGAKPDGKTDASHALQSAWARACS-STVASTVYVPKGRFYVQSGNFIGPCNYNSI 85
Query: 86 SFQLQGLLDL---------------FSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQL 130
+F + G L FS LS+ G GQG T W N+
Sbjct: 86 TFLINGTLVASSNFKVLAKSRTWISFSRINGLSIYGGILDGQGTTLWACKNSGINTCSLG 145
Query: 131 PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADSSK 180
T + + + I G+ SV+S+ +HI + C ++K+ +K+ A H + S
Sbjct: 146 ATTLEVSDSQNILINGLSSVNSQMYHIVVYDCQDVKIQGVKVLAASNSPNTDGIHVERSS 205
Query: 181 DILV-----------------------SEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNC 217
++ + + CGPG GIS+GSLGK ++ V +T++
Sbjct: 206 NVTILNSNIRTGDDCISIGPGTSHLWMERLACGPGHGISIGSLGKWWEEAGVENVTLKTA 265
Query: 218 TFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
F T NGVR+K+W G A N F+ IV +NV NP++IDQ YCP+N+
Sbjct: 266 HFKGTMNGVRIKSWGRPSNGFAKNILFKHIVFDNVNNPLIIDQNYCPHNQ 315
>gi|224068659|ref|XP_002302793.1| predicted protein [Populus trichocarpa]
gi|222844519|gb|EEE82066.1| predicted protein [Populus trichocarpa]
Length = 457
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 147/339 (43%), Gaps = 62/339 (18%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGPCKAS 84
V +V++FGA+ DGI DD+ AF +W A N +LVP G +++ F GPCK
Sbjct: 68 VFDVRNFGAIGDGIIDDTDAFKMAWDAACN-QVDPAVILVPYGFDFMIQSTIFSGPCKDG 126
Query: 85 ISFQLQGLLD-------------------LFSIDTSLSLAKGTFHGQGETAWPLN-QCHK 124
+ FQ+ G L + I+ G +G+GE W L + HK
Sbjct: 127 LVFQVDGTLMPPDGPDSWPQKNSRRQWLVFYRINEMSLQGGGVIYGRGEKWWDLPCKPHK 186
Query: 125 NSD-------CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD 177
+ C PT IRF ++ TI G+K +S F++ C N+ + + ITA A
Sbjct: 187 GINGTTMPGPCDSPTAIRFFMSSNLTIHGLKIKNSPQFNLRFDNCKNVHVESIHITAPAL 246
Query: 178 SSK--------------------------DILVSEVFCGPGQGISVGSLGKGIKDEEVVG 211
S D+ + + CGP GIS+GSLG V
Sbjct: 247 SPNTDGIHIENTNGVGIYNSVISNGSGCFDVDIENITCGPSHGISIGSLGNHNSRACVSN 306
Query: 212 LTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC-NI 270
+TVR+ + NGVR+KTW G S TF +I M+NV NPI+IDQ YC +C N
Sbjct: 307 ITVRDSVIRVSDNGVRIKTWQGGS-GAVSGITFSNIHMDNVRNPIIIDQFYCLTKRCANQ 365
Query: 271 KPKDSMPNIEIGNRNLVYNGVNVKVEGPETTSLCSNVKP 309
S+ I N YN + P CS+ P
Sbjct: 366 TSAVSVSEILYENIKGTYN-----IRSPPMHFACSDSLP 399
>gi|114841685|dbj|BAF32144.1| pollen allergen [Metasequoia glyptostroboides]
Length = 419
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 162/384 (42%), Gaps = 98/384 (25%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG--KYLVSFAEFEG 79
A + NV+ +GAV DG D ++AF T+W A VLV P ++LV+ FEG
Sbjct: 24 AARNIFNVEKYGAVGDGKHDSTQAFATAWSAACK---KPSAVLVVPANKRFLVNNLFFEG 80
Query: 80 PCKASISFQLQGLLDLFSIDTSLS----------------LAKGTFHGQGETAWPLNQC- 122
PC+ FQ+ G+++ + S + KG GQG+ W + QC
Sbjct: 81 PCQPHFIFQVDGIIEAYQNPASWKNSIIWLRFSRLNGFTLMGKGVIDGQGQQWW-VGQCK 139
Query: 123 ------HKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 176
H N D P I+ +F +D TI G+ +S FH C +K+ L I A
Sbjct: 140 WYNGRKHCN-DRDRPEAIKIDFSSDVTIQGLTITNSPKFHFVFGSCEGVKILGLNIKAPG 198
Query: 177 DS---------------------------------SKDILVSEVFCGPGQGISVGSLGKG 203
+S S +I ++++ CGPG GIS+GSLG+G
Sbjct: 199 NSPNTDGIDIFGSKNFLIQNNTIGTGDDCIAIGTGSSNIQINDLTCGPGHGISIGSLGRG 258
Query: 204 IKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
V + V F T NG+R+KTW GIA+N T+E++ M N NPI+I+Q YC
Sbjct: 259 NSRAVVSSVHVNRAKFIDTQNGLRIKTWQGGS-GIANNITYENVEMINAGNPILINQFYC 317
Query: 264 PY----------------------------NKCNIKPKDSMPNIEIGNRNLVYNGVNVKV 295
N K DSMP R++ + VN+K+
Sbjct: 318 TLVSGCKNQASAVQIKDVTYKNIHGTSATPAAVNFKCSDSMP-----CRDIKLSDVNLKL 372
Query: 296 -EGPETTSLCSNVKPTLFGKQIPA 318
G + L N L G+ IPA
Sbjct: 373 TSGKGASCLNQNAHGYLTGRVIPA 396
>gi|548488|sp|P35336.1|PGLR_ACTDE RecName: Full=Polygalacturonase; Short=PG; AltName: Full=Pectinase;
Flags: Precursor
gi|166325|gb|AAC14453.1| polygalacturonase [Actinidia deliciosa var. deliciosa]
Length = 467
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 144/303 (47%), Gaps = 58/303 (19%)
Query: 18 RGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEF 77
R +DA+ + +NV DFGA DG DD+KAF+ +W+ A + +LVP YLV F
Sbjct: 82 RVLDAS-KTVNVDDFGAKGDG-RDDTKAFEKAWKAACSSTS-SAVLLVPKKNYLVRPISF 138
Query: 78 EGPCKASISFQLQGLLD-----------------LFSIDTSLSLAKGTFHGQGETAWPLN 120
GPCK+ ++ Q+ G ++ S+ GT +G G+ W N
Sbjct: 139 SGPCKSGLTMQIYGTIEASDDRSDYRKDGRHWLVFDSVQNLRVEGGGTINGNGKIWWQ-N 197
Query: 121 QCHKNSD--CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD 177
C N C+ PT + F + +K +++ H++ C N++ ++L +TA +
Sbjct: 198 SCKTNKALPCKDAPTALTFYKSKHVIVKNLKIENAQQIHVSFDNCVNVQASNLMVTAPEN 257
Query: 178 S---------------------------------SKDILVSEVFCGPGQGISVGSLGKGI 204
S S+ + V+++ CGPG GIS+GSLG G
Sbjct: 258 SPNTDGIHVTGTQNIHISSCVIGTGDDCISIVNGSRKVRVNDITCGPGHGISIGSLGYGN 317
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
+ V + V T+NGVR+KTW G ASN F+++ M+NVENPI+IDQ YC
Sbjct: 318 SEAHVSDVVVNGAKLCGTTNGVRIKTWQGGS-GSASNIKFQNVEMHNVENPIIIDQNYCD 376
Query: 265 YNK 267
+K
Sbjct: 377 QDK 379
>gi|426204265|gb|AFY12689.1| polygalacturonase 11c, partial [Medicago marina]
Length = 177
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 96/170 (56%), Gaps = 34/170 (20%)
Query: 136 FNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----------------- 178
F F+N+S + G+ S DS+ FH+ +LGC N + +TA DS
Sbjct: 8 FMFVNNSMVHGLTSKDSKNFHVMVLGCNNFTFDGFTVTAPGDSPNTDGIHMGRSTDVKIL 67
Query: 179 ----------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCT 222
S+ I V V CGPG GISVGSLGK ++ V G+ V+NCT T T
Sbjct: 68 NTNIATGDDCISLGDGSRKITVQNVKCGPGHGISVGSLGKYTTEDNVEGVIVKNCTLTAT 127
Query: 223 SNGVRVKTWPDSHIGIA-SNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK 271
NGVR+KTWPD+ I S+ FEDI+MNNV NPI+IDQ YCP+N+C+ K
Sbjct: 128 QNGVRIKTWPDAPGTITVSDIHFEDIIMNNVMNPIIIDQEYCPWNQCSKK 177
>gi|12656894|gb|AAC28902.2| polygalacturonase 3, partial [Solanum lycopersicum]
Length = 365
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 142/293 (48%), Gaps = 51/293 (17%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGP- 80
A + NV+++GA +DG TD S+AF S A T+ VP G YL+ A F G
Sbjct: 18 ANTNIYNVQNYGAKSDGETDSSEAF-LSAWSAACASTSSSTIYVPRGNYLIRNAYFNGKR 76
Query: 81 CKA-SISFQLQGLL----DLFSIDTS-----------LSLAKGTFHGQGETAWPLNQCHK 124
C++ +I+ ++ G L D +I +S+ GTF GQG + W
Sbjct: 77 CQSNAITIRIDGTLLAPSDYNAIGNEENWIKFEKVNGVSIYGGTFDGQGASLWACKNSDY 136
Query: 125 NSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------ 178
+ T + F N+ ++G+ +S+ F I+I GC N+KL LK++A DS
Sbjct: 137 DDCPDGTTALNFYKSNNIIMSGVTVQNSQKFQISIDGCRNVKLQGLKVSAPGDSPNTDGI 196
Query: 179 ---------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVG 211
+ ++ + + CGPG GIS+GSLG ++ V
Sbjct: 197 HVKLSSGVSIMKSQIGTGDDCISIGPGNSNLWIEGIACGPGHGISIGSLGWKKQESGVQN 256
Query: 212 LTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
+T++ TF+ T+NGVRVKTW G N F+ IVM NV+NPI+IDQ YCP
Sbjct: 257 VTIKTVTFSGTTNGVRVKTWARPSNGFVRNVLFQHIVMVNVKNPIIIDQNYCP 309
>gi|225441686|ref|XP_002282759.1| PREDICTED: polygalacturonase [Vitis vinifera]
gi|297739724|emb|CBI29906.3| unnamed protein product [Vitis vinifera]
Length = 442
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 149/301 (49%), Gaps = 61/301 (20%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPP--GKYLVSFAEFEG 79
A+ + ++V D+GA DG +D ++AF +W A + +G+VLV P YL+ F+G
Sbjct: 71 ASVKTVSVNDYGAKGDG-SDATEAFKKAWEAACS---SQGSVLVVPQTKNYLLKPITFQG 126
Query: 80 PCKASISFQLQGLLDL------FSIDTSLSL-----------AKGTFHGQGETAWPLNQC 122
PCK+SI+ Q+ G + +S D + L GT +G G+T W N C
Sbjct: 127 PCKSSITVQIYGTVQASADRSAYSNDMTRWLVFENVQNLAVQGGGTINGNGKTWWE-NSC 185
Query: 123 HKNSD--CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS- 178
N D C+ PT + F + + +K +++ H++ C ++ + L +TA DS
Sbjct: 186 KVNDDLSCKDAPTALTFYNCKNLVVKNLKIQNAQQMHVSFEKCVGVQASGLTVTAPGDSP 245
Query: 179 --------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKD 206
++++ + + CGPG GIS+GSLG G +
Sbjct: 246 NTDGIHVTDTQNIQISSSVLGTGDDCISIVSGTQNLQATGITCGPGHGISIGSLGSGNSE 305
Query: 207 EEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYN 266
V +TV T + T+NGVR+KTW G ASN F++I M+NV+NPI+IDQ YC +
Sbjct: 306 AHVSDITVNGATLSGTTNGVRIKTWQGGS-GSASNIKFQNIEMHNVKNPIIIDQKYCDQD 364
Query: 267 K 267
K
Sbjct: 365 K 365
>gi|426204250|gb|AFY12681.1| polygalacturonase 11c, partial [Medicago rigidula]
Length = 173
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 98/172 (56%), Gaps = 34/172 (19%)
Query: 134 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--------------- 178
+ F F+N+S + G+ S DS+ FH+ +LGC N + +TA DS
Sbjct: 2 LGFMFVNNSMVNGLTSKDSKNFHVMVLGCNNFTFDGFTVTAPGDSPNTDGIHMGRSTDVK 61
Query: 179 ------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFT 220
S+ I + V CGPG GISVGSLGK ++ V G+TV+NCT T
Sbjct: 62 ILNTNIATGDDCISLGDGSRKITIQGVKCGPGHGISVGSLGKYTTEDNVEGVTVKNCTLT 121
Query: 221 CTSNGVRVKTWPDSHIGIA-SNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK 271
T NGVR+KTWPD+ I S+ FEDI+MNNV NPI+IDQ YCP+N+C+ K
Sbjct: 122 STLNGVRLKTWPDAPGTITVSDIHFEDIIMNNVMNPIIIDQEYCPWNQCSKK 173
>gi|224095385|ref|XP_002310385.1| predicted protein [Populus trichocarpa]
gi|222853288|gb|EEE90835.1| predicted protein [Populus trichocarpa]
Length = 397
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/287 (33%), Positives = 138/287 (48%), Gaps = 53/287 (18%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKA-SIS 86
+V +GA DG TD +KAF +W +A T+ VP G + + F+GPCK +I
Sbjct: 34 SVLSYGANPDGKTDSTKAFAAAWSQACA-STQPATISVPKGSFALGQVRFQGPCKNNAIL 92
Query: 87 FQLQGLLD---------------LFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDC-QL 130
++ G L +F ++++ GT GQG W K DC
Sbjct: 93 IRIDGTLVAPSDYGVLGRTKNWLIFEHVNGVTISGGTLDGQGAGLWSCKNSGK--DCPSG 150
Query: 131 PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------ 178
T + F+ N+ ITG+ S++S+ FHI I C N+K+ ++++A DS
Sbjct: 151 ATSLEFSNSNNIAITGLASLNSQMFHIVINACQNVKVQGVRVSAAGDSPNTDGIHVQSST 210
Query: 179 ---------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNC 217
+ ++ + V CGPG GIS+GSLGK ++ V +TV+
Sbjct: 211 GVTILNSRIGTGDDCVSIGPGTSNLWIENVACGPGHGISIGSLGKDSQEAGVQNVTVKTT 270
Query: 218 TFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
TFT T NGVR+KTW G A N F+ VM NV NPIVIDQ YCP
Sbjct: 271 TFTGTENGVRIKTWGRPSNGFARNILFQHAVMTNVHNPIVIDQNYCP 317
>gi|357130709|ref|XP_003566989.1| PREDICTED: polygalacturonase-like [Brachypodium distachyon]
Length = 424
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 140/297 (47%), Gaps = 58/297 (19%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGP 80
A+N V NV +GA DG DD+KA + +W A + G +L+P G KYL F GP
Sbjct: 44 ASNNVFNVLRYGAHGDGRHDDTKALEKTWAAACS-SSHPGILLIPKGNKYLTKHVTFSGP 102
Query: 81 CKASISFQLQGLL-----------------DLFSIDTSLSL-AKGTFHGQGETAWPLNQC 122
CK++I ++G L LF L++ GT G G+ W N C
Sbjct: 103 CKSNIKLMIEGTLVAPQKRSYWIEQTIRHWILFKAVRGLTVTGGGTIDGNGKIWWQ-NSC 161
Query: 123 HKNSDC---QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA--- 176
N++ Q P + F + + ++ ++S+ H+++ C +++++ L ITA +
Sbjct: 162 KVNAELPCRQSPAALTFYSCTNLKVNNLELLNSQQIHMSVECCSDVRISRLSITAPSTSP 221
Query: 177 ------------------------------DSSKDILVSEVFCGPGQGISVGSLGKGIKD 206
D +K++ V + CGPG GIS+GSLG +
Sbjct: 222 NTDGIHIAHSKDVKVRDCAIKTGDDCMSIEDGTKNLHVKNIVCGPGHGISIGSLGDRNSE 281
Query: 207 EEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
EV +T+ T+NG R+KTW G A N F++I+M+NV NPI+I+Q YC
Sbjct: 282 AEVANITIDGVRLHGTTNGARIKTWQGGR-GYAKNIVFQNIIMDNVWNPIIINQNYC 337
>gi|297841087|ref|XP_002888425.1| hypothetical protein ARALYDRAFT_894135 [Arabidopsis lyrata subsp.
lyrata]
gi|297334266|gb|EFH64684.1| hypothetical protein ARALYDRAFT_894135 [Arabidopsis lyrata subsp.
lyrata]
Length = 397
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 178/400 (44%), Gaps = 98/400 (24%)
Query: 7 FSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVL-- 64
FS++++ I S G LNV FGA +G+ D KAF +W A G+ +V+
Sbjct: 11 FSIVITIIMSHFGQFDARTSLNVLSFGAKPNGMVDSVKAFSDAWDAAC---GVADSVVIY 67
Query: 65 VPPGKYLVS-FAEFEGP-CKA-SISFQLQGLL-------------DLFSID--TSLSLAK 106
VP G+YLVS FEG C++ I+ ++ G L + FS ++++
Sbjct: 68 VPKGRYLVSGEVRFEGESCRSREITLRIDGTLIGPQDYNLLGKKENWFSFSGVHNVTILG 127
Query: 107 GTFHGQGETAWPLNQCHKNS-DC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYN 164
G+F +G T W C N +C + T +RF D I G+ S++S+ FHI I C N
Sbjct: 128 GSFDAKGTTLW---NCKANGYNCPEGATTLRFMDSYDVKIKGVLSLNSQLFHIAINRCRN 184
Query: 165 LKLNDLKITAHADS---------------------------------SKDILVSEVFCGP 191
+K+ D++I A +S +K+++V + CGP
Sbjct: 185 IKIEDVRIIAPDESPNTDGIHIQLSTDIEVQNASIKTGDDCISIGPGTKNLMVDGITCGP 244
Query: 192 GQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNN 251
G GIS+GSL K +++ V +TV+ F T NG+R+K+WP G F +M N
Sbjct: 245 GHGISIGSLAKSTEEQGVENVTVKRAVFVRTDNGLRIKSWPRHSNGFVERVRFLGALMVN 304
Query: 252 VENPIVIDQLYCPYNKCNIKPKDSMPNIEIGNR--NLVYNG------------------- 290
V PI+IDQ YCP + S P+ E G + +++Y+G
Sbjct: 305 VSYPILIDQNYCPGDS-------SCPSQESGIKINDVIYSGIKGTSATKVAIKMDCSEQV 357
Query: 291 ---------VNVKVEGPETTSLCSNVKPTLFGKQIPATCV 321
+N+ G + C+NV G P+ CV
Sbjct: 358 PCTGIRMQAINLNYYGEAAETSCTNVSGKQLGLVTPSGCV 397
>gi|242058083|ref|XP_002458187.1| hypothetical protein SORBIDRAFT_03g028380 [Sorghum bicolor]
gi|241930162|gb|EES03307.1| hypothetical protein SORBIDRAFT_03g028380 [Sorghum bicolor]
Length = 404
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 131/293 (44%), Gaps = 57/293 (19%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKAS-IS 86
NV FGA G TD S AF ++W A TV VP G +L+S A F GPC +S ++
Sbjct: 29 NVAGFGAKPGGRTDSSGAFASAWSAACRSQ-EPATVYVPNGHFLLSRAAFTGPCSSSRVT 87
Query: 87 FQLQGLLD--------------------LFSIDTSLSLAKGTFHGQGETAWPLNQCHKNS 126
Q+ G L +F L+++ GT G+GE W +
Sbjct: 88 LQVDGTLVAPSGYTSRGGSSGGDDDGWIVFDHVDGLTVSGGTVDGRGEALWACKAAGHSG 147
Query: 127 DCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-------- 178
T ++ D I+G+ SVDS +H+ I GC + + D++I A S
Sbjct: 148 CPSGATSLKVLNSRDVVISGLTSVDSELYHVVINGCEGVTVQDVQIVAPGSSPNTDGIHV 207
Query: 179 -------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLT 213
+ ++ V V CGPG GIS+GSLGK ++ V +T
Sbjct: 208 QGSSQVTVTRTGIQTGDDCVSVGPGTSNLRVEHVSCGPGHGISIGSLGKESEESGVENVT 267
Query: 214 VRNCTFTCTSNGVRVKTWPDSHIGIA--SNFTFEDIVMNNVENPIVIDQLYCP 264
V F T NG+R+KTW + + A FE +M++V NPI+IDQ YCP
Sbjct: 268 VTGAAFVGTENGLRIKTWARAKVEGAYVRGVAFEHALMHDVRNPIIIDQSYCP 320
>gi|147765591|emb|CAN62658.1| hypothetical protein VITISV_039094 [Vitis vinifera]
Length = 435
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 144/330 (43%), Gaps = 69/330 (20%)
Query: 7 FSLLVSFITSVRGIDATNRVLN-------VKDFGAVADGITDDSKAFDTSWREAWNWDGI 59
FS+L+ I S+ ++N LN V DFGA+ DG+TDDS+AF +W
Sbjct: 28 FSILICLILSMASSGSSNVALNGRTTTFNVLDFGAIGDGVTDDSQAFLKAWNAVCTARTT 87
Query: 60 KGTVLVPPGK-YLVSFAEFEGPCKA-SISFQLQG----------------LLDLFSIDTS 101
+++ K +L+S F GPCK I + G L ID
Sbjct: 88 SAMLIIQRKKTFLLSPTVFSGPCKPPQIHVLVLGDITAPKTRSAWGRSSYWLIFQYIDGF 147
Query: 102 LSLAKGTFHGQGETAWP--------LN--QCHKNSDCQLPTPIRFNFLNDSTITGIKSVD 151
+ KGT GQG + WP LN + D P + F+F N+ I G+ +
Sbjct: 148 IINGKGTLDGQGSSWWPSLYYKQELLNDTNSYDMDDVARPIALGFSFCNNLQIYGLNXXN 207
Query: 152 SRYFHINILGCYNLKLNDLKITAHADS--------------------------------- 178
S H+ + C L++L I A +S
Sbjct: 208 SPSKHVKLFRCNGAXLSNLNIKAPKESPNTDGIVIGECSQIQVHDNNIGTGDDCVAILKG 267
Query: 179 SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGI 238
S +I +S V CGPG GIS+GSLG + V + V++ +FT T NG+R+KTW G
Sbjct: 268 SSNINISRVACGPGHGISIGSLGMNGAYDTVEEIHVQDSSFTGTQNGIRIKTWQGGS-GY 326
Query: 239 ASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
A +F+ I +N ENPI+IDQ YCP C
Sbjct: 327 ARKISFQGITLNAAENPIIIDQYYCPQLHC 356
>gi|302807555|ref|XP_002985472.1| hypothetical protein SELMODRAFT_122081 [Selaginella moellendorffii]
gi|300146935|gb|EFJ13602.1| hypothetical protein SELMODRAFT_122081 [Selaginella moellendorffii]
Length = 410
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 147/299 (49%), Gaps = 61/299 (20%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKA 83
R NV +FGA DG++DDS+AF +W+ A + + T+LVP GK ++V++ GPC
Sbjct: 26 REFNVVEFGARGDGLSDDSQAFLAAWKRACHTE--NATMLVPGGKAFVVNYLLLTGPCAT 83
Query: 84 SISFQLQG--------LLDLFSIDTSLSLAK---------GTFHGQGETAWPLNQCHKNS 126
++ ++ G ++ +I T +S+A+ G GQGE W ++ C +NS
Sbjct: 84 NLRLKIDGIVLADTRDMIQWSNITTWISIARVHDFSVEGYGIIDGQGEEWWRIS-CRRNS 142
Query: 127 DCQLPTPIR-FNFLN-DS----TITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-- 178
+ R ++FL DS TI +K V+S H+ I N+ + ++I A DS
Sbjct: 143 SYVSDSSYRLYSFLTFDSSANITIQDLKFVNSPQMHLAIEESSNVSIKGVEILAPHDSPN 202
Query: 179 -------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDE 207
+ ++++ E+ CGPG GIS+GSLG+ E
Sbjct: 203 TDGIHLHMSNNVSIEKCIIGTGDDCISIAKNTSNVVIREIICGPGHGISIGSLGRNKTPE 262
Query: 208 EVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYN 266
V + V N T G+R+KTW G ASNF++ ++VM NV PI+IDQ YC N
Sbjct: 263 FVSNVKVENSILESTKYGLRIKTWQGGQ-GFASNFSYYNVVMMNVLQPIIIDQYYCDGN 320
>gi|357126288|ref|XP_003564820.1| PREDICTED: polygalacturonase-like [Brachypodium distachyon]
Length = 412
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 156/341 (45%), Gaps = 74/341 (21%)
Query: 4 AARFSLLVSFITSVRGIDA--TNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGI-K 60
A SLLV+ ++ + A + +V +V +GA DG+TD + F +W +A G+
Sbjct: 5 APLLSLLVNLHAALLFLPAPGSAQVYDVTRYGARPDGVTDSAVPFLRAWADACRSPGLGP 64
Query: 61 GTVLVPPGKYLVSFAE-FEGPCKA-SISFQLQGLL-----------------DLFSIDTS 101
TV VPPG +L+ + F GPCKA SI+F + G L S+D
Sbjct: 65 ATVHVPPGVFLLGRSTTFSGPCKARSIAFSIAGTLLAPAGYGWDSAGPGRWITFESVD-R 123
Query: 102 LSLAKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTIT----------GIKSVD 151
L+++ GT +G + W C K QL P+ S++T G++SV+
Sbjct: 124 LTVSGGTLDARGASLW---ACKKQQ--QLLHPLLHCPSGASSLTISNSKGVLVEGVRSVN 178
Query: 152 SRYFHINILGCYNLKLNDLKITAHADS--------------------------------- 178
S FH+ +L + + L + + A DS
Sbjct: 179 SELFHVVVLQSHGVTLRRVAVEAPGDSPNTDGIHVHMSSHVSVYDANIRTGDDCVSIGPG 238
Query: 179 SKDILVSEVFCGPGQGISVGSLGK--GIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHI 236
+ + V V CGPG GIS+GSLGK G+ E V +TV+ FT T+NG+R+KTW S
Sbjct: 239 NSHLWVERVACGPGHGISIGSLGKEQGMAVEAVQNVTVKTTWFTGTTNGLRIKTWGSSKR 298
Query: 237 GIASNFTFEDIVMNNVENPIVIDQLYCP-YNKCNIKPKDSM 276
G S F D M V+NPI+IDQ YCP N C S+
Sbjct: 299 GFVSGVDFIDSTMTGVQNPIIIDQNYCPDKNGCGTHKSSSI 339
>gi|297829364|ref|XP_002882564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328404|gb|EFH58823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 439
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 136/292 (46%), Gaps = 56/292 (19%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKAS 84
R NV FGA A+G DDSKAF +W A + GI V+ Y++ F GPCK++
Sbjct: 69 RAFNVNTFGAKANG-NDDSKAFMKAWEAACSSTGIVYVVVPNNRDYMLKSVTFSGPCKST 127
Query: 85 -ISFQLQGLLDLF----------------SIDTSLSLAKGTFHGQGETAWPLNQCHKNSD 127
I F++ G+++ + ++D G G G WP N C N
Sbjct: 128 LIIFKIYGMIEAWKNPSDYKERRHWIVFENVDNLRVEGGGRIDGNGHIWWP-NSCKINPQ 186
Query: 128 CQ---LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------ 178
PT + F N+ ++ I+ +++ H+ C N+K +L +T+ ADS
Sbjct: 187 LPCLGAPTAVTFVECNNLRVSNIRLENAQQMHLTFQDCKNVKALNLMVTSPADSPNTDGI 246
Query: 179 ---------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVG 211
S+++ + + CGPG GIS+GSLG+ + V
Sbjct: 247 HVTGTQNILIQDSIVRTGDDCISIVSGSENVRATGITCGPGHGISIGSLGEDNSEAYVSN 306
Query: 212 LTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
+ V T T+NGVR+KTW H G+A N F+DI+M NV NPI+I+Q YC
Sbjct: 307 VVVNKATLIGTTNGVRIKTWQGGH-GMAKNIIFQDIIMKNVTNPIIINQDYC 357
>gi|302796123|ref|XP_002979824.1| hypothetical protein SELMODRAFT_111266 [Selaginella moellendorffii]
gi|300152584|gb|EFJ19226.1| hypothetical protein SELMODRAFT_111266 [Selaginella moellendorffii]
Length = 410
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 149/300 (49%), Gaps = 61/300 (20%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKA 83
R NV +FGA DG++DDS+AF +W+ A + + T+LVP GK ++V++ GPC
Sbjct: 26 REFNVVEFGARGDGLSDDSQAFLAAWKRACHTE--NATMLVPGGKAFVVNYLLLTGPCAT 83
Query: 84 SISFQLQGLL-----DLF---SIDTSLSLAK---------GTFHGQGETAWPLNQCHKNS 126
++ ++ G++ D+ +I T +S+A+ G GQGE W ++ C +NS
Sbjct: 84 NLRLKIDGIVLADTRDMIHWSNITTWISIARVYDFSVEGYGIIDGQGEEWWRIS-CRRNS 142
Query: 127 DCQLPTPIR-FNFLN-DS----TITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-- 178
+ R ++FL DS TI +K V+S H+ I N+ + ++I A DS
Sbjct: 143 SYVSDSSYRLYSFLTFDSSANITIQDLKFVNSPQMHLAIEESSNVSIKGVEILAPHDSPN 202
Query: 179 -------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDE 207
+ ++++ E+ CGPG GIS+GSLG+ E
Sbjct: 203 TDGIHLHMSNNVSIEKCIIGTGDDCISIAKNTSNVVIREIICGPGHGISIGSLGRNKTPE 262
Query: 208 EVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
V + V N T G+R+KTW G ASNF++ ++VM NV PI+IDQ YC N
Sbjct: 263 FVSNVKVENSILESTKYGLRIKTWQGGQ-GFASNFSYYNVVMMNVLQPIIIDQYYCDGNS 321
>gi|224128211|ref|XP_002320271.1| predicted protein [Populus trichocarpa]
gi|222861044|gb|EEE98586.1| predicted protein [Populus trichocarpa]
Length = 438
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 147/346 (42%), Gaps = 69/346 (19%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGPCKAS 84
V +V+ FGA+ DGITDD+ AF +W A N D +LVP G ++++ F GPC+
Sbjct: 42 VFDVRSFGAIGDGITDDTDAFKMAWDAACNQDD-SAVILVPYGFEFMIQSTIFTGPCQGG 100
Query: 85 ISFQLQGLLD-------------------LFSIDTSLSLAKGTFHGQGETAWPLN-QCHK 124
+ FQ+ G L + I+ L G G+GE W L + HK
Sbjct: 101 LVFQVDGTLMPPDGPESWPQKNSRRQWLVFYRINEMSLLGGGVIDGRGEKWWDLPCKPHK 160
Query: 125 NSD-------CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD 177
+ C P IRF ++ T+ G+K +S F+ C N+ + + ITA A
Sbjct: 161 GINGTTMPGPCDSPIAIRFFMSSNLTVQGLKIKNSPQFNFRFDNCKNVHVESIHITAPAL 220
Query: 178 SSK---------------------------------DILVSEVFCGPGQGISVGSLGKGI 204
S D+ + + CGP GIS+GSLG
Sbjct: 221 SPNTDGIHIENTNGVEIYNSVISNGDDCVSIGSGCYDVDIRNITCGPSHGISIGSLGNHN 280
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
V +TVR+ + NGVR+KTW G S TF +I M+NV NPI+IDQ YC
Sbjct: 281 SRACVSNITVRDSVIRVSDNGVRIKTWQGGS-GAVSGITFSNIHMDNVRNPIIIDQFYCL 339
Query: 265 YNKC-NIKPKDSMPNIEIGNRNLVYNGVNVKVEGPETTSLCSNVKP 309
C N S+ +I N YN + P CS+ P
Sbjct: 340 SKGCTNQTSALSVSDILYENIKGTYN-----IRSPPMHFACSDSVP 380
>gi|22329192|ref|NP_195292.2| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|332661147|gb|AEE86547.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 394
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 145/306 (47%), Gaps = 58/306 (18%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS-I 85
NV +F A DG TDDS+AF +W A DG T+L+P GK +L+ F+GPCK+S I
Sbjct: 25 NVLNFDAKGDGQTDDSEAFLQAWTAACGGDGDIKTLLIPSGKTFLLQPTVFQGPCKSSSI 84
Query: 86 SFQLQGLL----DLFSIDTSLS--------------LAKGTFHGQGETAWPLNQCHKNSD 127
QL G + D F+ +S + GT +G + W LN
Sbjct: 85 KVQLDGTIVAPSDKFAWSDPISRMWIKFSTVSGLIIVGSGTIDSRGSSFWELNL----KA 140
Query: 128 CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--------- 178
Q PT + + ++ I GI S+DS HI+I C + ++++ + A S
Sbjct: 141 SQRPTALHISKCDNLRINGITSIDSPKNHISIKTCNTVAISNINLFAPETSPNTDGIDIS 200
Query: 179 ------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTV 214
S +I ++ + CGPG GISVGSLG G + +V + V
Sbjct: 201 DSTNINIFDSTIQTGDDCIAINSGSSNINITGINCGPGHGISVGSLGAGGAEAKVSDVQV 260
Query: 215 RNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKD 274
+CTF T+NG R+KTW G A N +F DI + N +NPI+IDQ Y + +
Sbjct: 261 THCTFNQTTNGARIKTWLGGQ-GYARNISFTDITLVNTKNPIIIDQHYIDKGRLTEESAV 319
Query: 275 SMPNIE 280
++ N++
Sbjct: 320 AISNVK 325
>gi|255548325|ref|XP_002515219.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223545699|gb|EEF47203.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 537
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 140/312 (44%), Gaps = 63/312 (20%)
Query: 19 GIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEF 77
G D + VL+V+ FGA+ DGITDD+ AF +W A + + +LVP K+++ F
Sbjct: 134 GNDYNSGVLDVRKFGAIGDGITDDTDAFKMAWETACSQND-TAIILVPYTFKFMIQSTIF 192
Query: 78 EGPCKASISFQLQGL-------------------LDLFSIDTSLSLAKGTFHGQGETAWP 118
GPC+ I FQ+ G L + I+ L GT G+GE W
Sbjct: 193 NGPCQGGIVFQVDGTIMPPDGPESWPQKNSKRQWLVFYRINELSLLGGGTIDGRGEKWWD 252
Query: 119 LN-QCHKN-------SDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
L + HK C P IRF ++ T+ GI+ +S F+ C N+ ++ +
Sbjct: 253 LPCKPHKGINGTTLPGPCDSPIAIRFFMSSNLTVQGIRIKNSPQFNFRFDNCRNVHIDSI 312
Query: 171 KITAHADSSK---------------------------------DILVSEVFCGPGQGISV 197
ITA A S D+ + + CGP GIS+
Sbjct: 313 HITAPALSPNTDGIHIENTNNVEIYDSVISNGDDCVSIGSGCYDVDIRNITCGPSHGISI 372
Query: 198 GSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIV 257
GSLG V +TVR+ + NGVR+KTW G + TF +I M+NV+NPI+
Sbjct: 373 GSLGNHNSRACVSNITVRDSVIKLSDNGVRIKTW-QGGSGAVTGITFSNIHMDNVKNPII 431
Query: 258 IDQLYCPYNKCN 269
IDQ YC +C+
Sbjct: 432 IDQFYCLTKECS 443
>gi|297743439|emb|CBI36306.3| unnamed protein product [Vitis vinifera]
Length = 495
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 144/321 (44%), Gaps = 60/321 (18%)
Query: 7 FSLLVSFITSVRGIDATNRVLN-------VKDFGAVADGITDDSKAFDTSWREAWNWDGI 59
FS+L+ I S+ ++N LN V DFGA+ DG+TDDS+AF +W
Sbjct: 97 FSILICLILSMASSGSSNVALNGRTTTFNVLDFGAIGDGVTDDSQAFLKAWNAVCTARTT 156
Query: 60 KGTVLVPPGK-YLVSFAEFEGPCKA-SISFQLQG----------------LLDLFSIDTS 101
+++ K +L+S F GPCK I + G L ID
Sbjct: 157 SAMLIIQRKKTFLLSPTVFSGPCKPPQIHVLVLGDITAPKTRSAWGRSSYWLIFQYIDGF 216
Query: 102 LSLAKGTFHGQGETAWP-LNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINIL 160
+ KGT GQG + WP L + + + F+F N+ I G+ ++S H+ +
Sbjct: 217 IINGKGTLDGQGSSWWPSLYYKQELLNDTNSYALGFSFCNNLQIYGLNVINSPSKHVKLF 276
Query: 161 GCYNLKLNDLKITAHADS---------------------------------SKDILVSEV 187
C L++L I A +S S +I +S V
Sbjct: 277 RCNGAILSNLNIKAPKESPNTDGIVIGECSQIQVHDNNIGTGDDCVAILKGSSNINISRV 336
Query: 188 FCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDI 247
CGPG GIS+GSLG + V + V++C+FT T NG+R+KTW G A +F+ I
Sbjct: 337 ACGPGHGISIGSLGMNGAYDTVEEIHVQDCSFTGTQNGIRIKTWQGGS-GYARKISFQGI 395
Query: 248 VMNNVENPIVIDQLYCPYNKC 268
+N ENPI+IDQ YCP C
Sbjct: 396 TLNAAENPIIIDQYYCPQLHC 416
>gi|226491171|ref|NP_001150436.1| polygalacturonase precursor [Zea mays]
gi|195639244|gb|ACG39090.1| polygalacturonase precursor [Zea mays]
Length = 499
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 135/301 (44%), Gaps = 62/301 (20%)
Query: 29 VKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASISFQ 88
VK FGAV DG+TDD+ A T+W A DG + +LV F GPC+ S++ Q
Sbjct: 104 VKGFGAVGDGLTDDTGAIKTAWDTACQDDGASVVLAAAGYSFLVHTTVFTGPCQGSVTIQ 163
Query: 89 LQGLLD-----------------LFSIDTSLSL-AKGTFHGQGETAWPLN-QCHK----- 124
L G + LF +SL G G+G+ W L + HK
Sbjct: 164 LDGTIVAPSDPDMWPANSKRNWLLFYQAHGMSLRGAGLIDGKGQKWWDLPCKSHKGQGGS 223
Query: 125 ---NSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA------- 174
+ C P +RF N+ T+ G+K +S FHI C + + L I++
Sbjct: 224 SGHGASCDSPVALRFFMTNNVTVQGLKVQNSPEFHIRFDSCRGVVASGLSISSPALSPNT 283
Query: 175 ---HADSSKDIL-----------------------VSEVFCGP-GQGISVGSLGKGIKDE 207
H ++++D+L V V CGP G GIS+GSLGK
Sbjct: 284 DGIHVENTQDVLITNTAVSNGDDCVSIGAGTLNMHVENVTCGPGGHGISIGSLGKQGSRA 343
Query: 208 EVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
V +TVRN + NGVR+KTW G S+ +F+++ M+ V NPI+IDQ YC
Sbjct: 344 CVANVTVRNAVIRHSDNGVRIKTWQGGS-GAVSSVSFQNVRMDAVRNPIIIDQYYCLSKS 402
Query: 268 C 268
C
Sbjct: 403 C 403
>gi|356532916|ref|XP_003535015.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 394
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 169/389 (43%), Gaps = 80/389 (20%)
Query: 7 FSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP 66
F +SF + DA + +NV FGA +G D + +F +W A T VP
Sbjct: 12 FLATISFFSFTFSKDAPS--INVLSFGAKPNGNFDSTTSFVKAWSSACK-SKEPATFYVP 68
Query: 67 PGKYLVSFAEFEGPCKASISFQLQGLLDLFSIDTSL----------------SLAKGTFH 110
G +L+ FEGPC ++I F++ G + S +SL S+ GTF
Sbjct: 69 KGFFLLKQVIFEGPCSSNIKFRIAGTIVAPSDYSSLGNKSGFWIMFRNLNGFSVQGGTFD 128
Query: 111 GQGETAWPLNQCHKN-SDCQL-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLN 168
G+G++ W +C K+ S C I F+ ND + G+ S++S+ HI + C N+
Sbjct: 129 GKGDSYW---RCRKSGSSCPAGARSITFSSCNDVKVRGLTSLNSQSMHIAVEQCKNILFK 185
Query: 169 DLKITAHADS---------------------------------SKDILVSEVFCGPGQGI 195
D+ I A + S S ++ + V CGPG GI
Sbjct: 186 DVNIKAPSTSPNTDGIDVTLSTGVTVIDATIRTGDDCIALIQGSTNVWIERVTCGPGHGI 245
Query: 196 SVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENP 255
S+GSLG + V +TV N F T NGVR+K+W G AS+ F ++ M N NP
Sbjct: 246 SIGSLGTSEDEAGVQNVTVINSIFDGTQNGVRIKSWAKPSNGYASDIVFRNLTMLNAYNP 305
Query: 256 IVIDQLYCPYNK-C---------------NIKPKDSMP---NIEIGNRN----LVYNGVN 292
I+IDQ YCP +K C +I+ + P N + N + ++
Sbjct: 306 IIIDQKYCPGDKNCPQQNSGVKISKVSYEHIRGTSACPQAINFDCSKSNPCEGIKLQDID 365
Query: 293 VKVEGPETTSLCSNVKPTLFGKQIPATCV 321
+ + +TS C N G+ IP +C+
Sbjct: 366 LVYDNGSSTSTCKNADGITRGEVIPKSCL 394
>gi|22426|emb|CAA44248.1| polygalacturonase [Zea mays]
gi|287830|emb|CAA47234.1| polygalacturonase [Zea mays]
Length = 306
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 133/288 (46%), Gaps = 55/288 (19%)
Query: 1 LLLAARFSLLVSFITSVRGIDAT----NRVLNVKDFGAVADGITDDSKAFDTSWREAWNW 56
L L F ++ +GIDA ++ GA +G TD +KA +W A
Sbjct: 11 LFLLVLFCIVHGEKEESKGIDAKASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGG 70
Query: 57 DGIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLL----------------DLFSIDT 100
G K T+L+P G +LV F GPCK ++ Q+ G L ++ +D
Sbjct: 71 TG-KQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYKDHGNWIEILRVDN 129
Query: 101 SLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINI 159
+ KG GQG W N C K DC+ LP + +F+N+ ++G+ ++S++FH+N+
Sbjct: 130 LVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNM 189
Query: 160 LGCYNLKLNDLKITAHADS---------------------------------SKDILVSE 186
C ++ + D+ +TA DS + + ++
Sbjct: 190 YRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNITG 249
Query: 187 VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDS 234
V CGPG GIS+GSLG+ +++V + V++CT T GVR+K + D+
Sbjct: 250 VTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDA 297
>gi|297791313|ref|XP_002863541.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297309376|gb|EFH39800.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 381
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 142/314 (45%), Gaps = 68/314 (21%)
Query: 11 VSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK- 69
V F+T + + ++ +V FGA +GITDDSKAF T+W+ G T L+P K
Sbjct: 8 VFFLTLLHSVLVNGQIYDVLKFGAKGNGITDDSKAFVTAWKAMCGSGGNSKTFLIPSNKT 67
Query: 70 YLVSFAEFEGPCKA-SISFQLQG---------------LLDLFSIDTSLSL---AKGTFH 110
+L+ F+GPCK+ S+ + G L S + L GT H
Sbjct: 68 FLLQPLMFQGPCKSPSVQVKFDGKIVAPINKAAWSENKLFRWVSFKEIIGLTVTGSGTIH 127
Query: 111 GQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
G+G + W Q H F ND I+GI S +S HI+I C +K+ +
Sbjct: 128 GRGSSFWK--QLH------------FKSCNDLKISGITSFNSPRNHISISECKRVKITKI 173
Query: 171 KITAHADS---------------------------------SKDILVSEVFCGPGQGISV 197
K+ A DS S +I ++ + CGPG GISV
Sbjct: 174 KLVAPHDSPNTDGIDISRSSDVDIYDTIIGTGDDCVAINNGSMNINITRMNCGPGHGISV 233
Query: 198 GSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIV 257
GSLG+ ++ V + V NCTF T NG R+KTWP+ G A N F+ + +NPI+
Sbjct: 234 GSLGRDGEESIVENVQVTNCTFFRTDNGARIKTWPNGK-GYAKNILFQGLTFRETKNPII 292
Query: 258 IDQLYCPYNKCNIK 271
IDQ Y + +++
Sbjct: 293 IDQNYVDKGRLDVE 306
>gi|449464038|ref|XP_004149736.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 435
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 138/297 (46%), Gaps = 60/297 (20%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGP 80
+ +V+NV DFGA +G DD+KAF+ +W+EA + K T+LVP G+ Y + F GP
Sbjct: 63 GSTKVVNVDDFGAKGNG-QDDTKAFELAWKEACS--SRKATLLVPKGRTYYLKPIIFSGP 119
Query: 81 CKASISFQLQGL------------------LDLFSIDTSLSLAKGTFHGQGETAWPLNQC 122
C++ ++ ++ G+ L +D + G +G G W N C
Sbjct: 120 CRSPLTLKINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQ-NSC 178
Query: 123 HKNSDC---QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS- 178
N + PT + F + ++ + D++ H+ C N+K +L++ A +S
Sbjct: 179 KVNKGLPCKRAPTAVTFYQCINLVVSNLMFKDAQQMHLTFQKCTNVKALNLRVVAPGNSP 238
Query: 179 --------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKD 206
S+++ ++ CGPG GIS+GSLG +
Sbjct: 239 NTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGISIGSLGADNSE 298
Query: 207 EEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
EV + V + TSNGVR+KTW G A N F+++VM NV NPI+IDQ YC
Sbjct: 299 AEVSNIRVNRALISGTSNGVRIKTWQGGS-GYAKNIMFQNVVMRNVSNPIIIDQNYC 354
>gi|449531265|ref|XP_004172608.1| PREDICTED: probable polygalacturonase At3g15720-like, partial
[Cucumis sativus]
Length = 374
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 155/343 (45%), Gaps = 76/343 (22%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK 60
LL AA F ++ ++S + +++ NV D+GA+ +G TDDSKAF +W +
Sbjct: 3 LLSAAIFLYSIAILSSWTVLGSSD--FNVLDYGAIGNGKTDDSKAFLKAWNDVCGATEES 60
Query: 61 GTVLVPPGK-YLVSFAEFEGPCKASISFQLQGLLDLFSIDTSLSLAKGT----------- 108
T+ VP GK YL++ +F+GPCK S QL G L + D +S KG
Sbjct: 61 PTLHVPDGKTYLLNPLKFQGPCK---SKQLGGTLMAPTKDEWISDGKGQWIQFFDIEGLN 117
Query: 109 ------FHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGC 162
F GQG W + F+ N + G+K ++S HI+I C
Sbjct: 118 LQGGGRFDGQGSLWWK--------------ALFFHNCNGLQMKGMKHINSAKNHISINMC 163
Query: 163 YNLKLNDLKITAHADS----------SKDILVSEVF-----------------------C 189
+++ + L I+A DS S +I + + F C
Sbjct: 164 HDVIFSHLHISAPEDSPNTDGIDISESTNIFIEDSFMATGDDCIAINNGSSNININGITC 223
Query: 190 GPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVM 249
GPG GIS+GSLGK + V + V NC T NG+R+KTW + G A N TFE I M
Sbjct: 224 GPGHGISIGSLGKDGEYNVVENVHVSNCLLRSTQNGIRIKTWEGGY-GYAKNITFEKITM 282
Query: 250 NNVENPIVIDQLYCPYNKCNIKPKDSMPNIEIGNRNLVYNGVN 292
N +NPI+IDQ Y Y M ++I ++ Y VN
Sbjct: 283 KNAKNPIIIDQYYSSYAYSR-----KMKGMDIKVSDVTYREVN 320
>gi|34850203|dbj|BAC87792.1| putative polygalacturonase [Daucus carota]
Length = 388
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 142/293 (48%), Gaps = 58/293 (19%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGP-CK-ASI 85
N+ FGA + G +D SKA +W A T+ VPPG++L+ F G C+ +I
Sbjct: 25 NILRFGAKSGGQSDSSKALLKAWGAACATTK-PATIYVPPGRFLLKNVYFYGEHCRNGAI 83
Query: 86 SFQLQGLLDL---------------FSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQL 130
+ ++ G L F T +S+ GT GQG + W K S +
Sbjct: 84 TIRVDGTLVAPSDYNVLGSSGNWIKFERVTGVSIYGGTLDGQGTSLWAC----KTSGKKC 139
Query: 131 P---TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HAD 177
P T + F N I+G+ S++S+ FH+ I GC+N+KL+ ++++A H
Sbjct: 140 PEGITSLAFYNSNKIIISGLASLNSQMFHVVIDGCHNVKLDGIRVSASGKSPNTDGIHLQ 199
Query: 178 SS-----------------------KDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTV 214
SS ++ + + CGPG GIS+GSLG +++ V +TV
Sbjct: 200 SSSGVTVLSSHISTGDDCISMGPGNSNVWIENIACGPGHGISIGSLGWELQEPGVQNVTV 259
Query: 215 RNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
++ TFT T NGVR+KTW G + F+ I M +V+NP++IDQ YCP K
Sbjct: 260 KSVTFTGTENGVRIKTWARPTKGFVKDVLFQHIQMVDVQNPVIIDQNYCPGEK 312
>gi|226528677|ref|NP_001140231.1| uncharacterized protein LOC100272271 precursor [Zea mays]
gi|194698606|gb|ACF83387.1| unknown [Zea mays]
Length = 472
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 164/378 (43%), Gaps = 85/378 (22%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
V ++ +GA DG DD+ A +W EA +LVP G+ YL+ GPC++
Sbjct: 63 VFSLDRYGARGDGRHDDTGALARAW-EAACASPRPAVLLVPGGRRYLLKLVVLRGPCRSR 121
Query: 85 ISFQLQGLLD------------------LFSIDTSLSLAKGTFHGQGETAWPLN-QCHKN 125
++ ++G L S+D +G+ G G + WP + + +K
Sbjct: 122 VAVTVKGTLVASPNRADWSDSDRRHWIVFRSVDRLTVHGRGSIDGNGHSWWPHSCKINKA 181
Query: 126 SDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA---------- 174
C + PT + F++ + + +K V+S+ H++I C +++++ L ITA
Sbjct: 182 LPCKEAPTALSFHYCTNLRVENLKMVNSQQIHMSIEDCASVQVSRLSITAPGTSPNTDGI 241
Query: 175 HADSSKDILV------------------------SEVFCGPGQGISVGSLGKGIKDEEVV 210
H SKD+ V S V CGPG GISVGSLG EV
Sbjct: 242 HITRSKDVRVTNCKIKTGSDDCMSIEDGTHGLHVSGVVCGPGHGISVGSLGDDDSRAEVS 301
Query: 211 GLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNI 270
G+T+ + T+NG R+KT+ G A + TF+++ M+ V NPIVIDQ YC +
Sbjct: 302 GITIDSVQLHGTTNGARIKTYQGGS-GYARDITFQNMAMHGVRNPIVIDQSYCDRAEAEP 360
Query: 271 KPKDSMPNIEIGN--------------------------RNLVYNGVNVKVEGPE--TTS 302
++ ++I + R +V +++K++G + S
Sbjct: 361 PCRERRSAVQISDVVFRNIRGTTVTRDAIRMSCSRNVPCRGIVLQNIDLKMQGGQGHAES 420
Query: 303 LCSNVKPTLFGKQIPATC 320
C N K GK +P C
Sbjct: 421 TCRNAKWRKSGKVVPQPC 438
>gi|357114981|ref|XP_003559272.1| PREDICTED: polygalacturonase ADPG1-like [Brachypodium distachyon]
Length = 407
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 166/379 (43%), Gaps = 91/379 (24%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
V +V ++GA DG DD++A +W A + +LVP GK YL+ GPCK++
Sbjct: 32 VFSVDNYGARGDGKHDDTQALAKAWNAACS-SSRPAVLLVPKGKSYLLKSLTLSGPCKSN 90
Query: 85 ISFQLQGLLD------------------LFSIDTSLSLAKGTFHGQGETAWPLNQCH--K 124
++F ++G L L + GT G G+ W N C K
Sbjct: 91 VAFMVKGTLVAPQSRSDWSEDNRRHWIVLHGVSGLTVTGGGTIDGNGDIWWK-NSCKIDK 149
Query: 125 NSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA--------- 174
C + PT + F+ ++ T+ I+ VDS+ ++++ C +++L L ITA
Sbjct: 150 ALPCTEAPTALTFHMCDNLTVENIRIVDSQQINLSVEDCSDVRLARLSITAPGTSPNTDG 209
Query: 175 -HADSSKDI-----------------------LVSEVFCGPGQGISVGSLGKGIKDEEVV 210
H SKD+ VS+V CGPG GIS+GSLG EV
Sbjct: 210 IHITRSKDVQVRDCLIKTGDDCMSIEDGTHNLRVSKVVCGPGHGISIGSLGDDNSRAEVS 269
Query: 211 GLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNI 270
G+ + T+NG RVKT+ G A + F++I+M+NV+NPI+IDQ YC +
Sbjct: 270 GIYIDTVQLYGTTNGARVKTYQGGS-GYAKDIVFQNIIMDNVQNPIIIDQNYCD----SA 324
Query: 271 KP-KDSMPNIEIGN--------------------------RNLVYNGVNVKVEG--PETT 301
KP K+ +EI N ++V +N+K+EG ET
Sbjct: 325 KPCKNQELAVEISNVVFKNIRGTTVSKDAIQLNCSNSVSCSDIVLENINLKMEGGEGETE 384
Query: 302 SLCSNVKPTLFGKQIPATC 320
S C N + G P C
Sbjct: 385 STCQNARWRKSGNVSPLPC 403
>gi|356555276|ref|XP_003545960.1| PREDICTED: LOW QUALITY PROTEIN: exopolygalacturonase-like [Glycine
max]
Length = 379
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 112/213 (52%), Gaps = 38/213 (17%)
Query: 107 GTFHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNL 165
GT GQG +C N++C+ L T + F+F+ + + + S+DS+ H + GC N+
Sbjct: 90 GTLDGQGSAT--RQKCKNNANCEILFTTMDFDFITNGHVQNLHSIDSKGGHFIVFGCENM 147
Query: 166 KLNDLKI---------------------------------TAHADSSKDILVSEVFCGPG 192
DL + A +K++ +S V CGPG
Sbjct: 148 TFTDLTLKSPENNHNTDGIKISQTNGINITGVKIGTGDDCVAMISGTKNVRISNVVCGPG 207
Query: 193 QGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTW--PDSHIGIASNFTFEDIVMN 250
GISVGSLGK + +V + V+NCTF TSNG+R+KTW P AS F +EDIVMN
Sbjct: 208 HGISVGSLGKNDGETDVEDIVVKNCTFVGTSNGLRIKTWAAPLKKNLKASKFVYEDIVMN 267
Query: 251 NVENPIVIDQLYCPYNKCNIKPKDSMPNIEIGN 283
NV+NP+VIDQ YCP ++C++K +++I N
Sbjct: 268 NVQNPVVIDQQYCPLHQCDLKLVFGNSHVQISN 300
>gi|357518267|ref|XP_003629422.1| Polygalacturonase [Medicago truncatula]
gi|355523444|gb|AET03898.1| Polygalacturonase [Medicago truncatula]
Length = 373
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/352 (31%), Positives = 161/352 (45%), Gaps = 71/352 (20%)
Query: 24 NRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCK 82
N + NV +GA DGI+DD++AF +W +G T+++PP K Y V+ EF G CK
Sbjct: 30 NNIFNVIAYGARGDGISDDTQAFLRAWNHTCGAEGTS-TLVIPPKKLYFVNNLEFRGACK 88
Query: 83 A-SISFQLQGLLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLND 141
A SI Q+Q ++ +ID + +G +G G T W QC C P + F ND
Sbjct: 89 ATSILIQIQ-YVNGLTIDGT---RRGRINGHGSTWW---QC---KSCPRPRILSFYACND 138
Query: 142 STITGIKSVDSRYFHINILGCYNLKLNDLKITAHA----------DSSKDILVSE----- 186
++ ++ +S H I GC K+++L + + + SSK+IL+ +
Sbjct: 139 LSVRNVRITNSPGAHGTINGCNRAKISNLDVQSPSHSPNTDGFDISSSKNILIEDSTIRT 198
Query: 187 --------------------------------------VFCGPGQGISVGSLGKGIKDEE 208
V CGPG GIS+GSLGKG E
Sbjct: 199 GDDCIAINGGSSYISVSRFRAVKTGGSALTGFSSTRVRVACGPGHGISIGSLGKGNSYET 258
Query: 209 VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
V + V NC+FT T+NG R+KT+P G A TFE I + NV+N I+IDQ Y
Sbjct: 259 VEEVNVPNCSFTNTTNGARIKTFPGGS-GYAKKITFEQIQLTNVKNTIIIDQHYGGKVAT 317
Query: 269 NIKPKDSMPNIE-IGNRNLVYNGVNV--KVEGPETTSLCSNVKPTLFGKQIP 317
D N++ + N+V + V + E E S C N T+ G IP
Sbjct: 318 ESYAGDLAINLDCMSCFNVVLDQVYIFSSQEKKEFHSFCKNFHGTI-GSTIP 368
>gi|147846598|emb|CAN83753.1| hypothetical protein VITISV_026267 [Vitis vinifera]
Length = 441
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 146/299 (48%), Gaps = 58/299 (19%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPC 81
A+ +NV D+GA DG +D ++AF +W A + G ++VP YL+ FEGPC
Sbjct: 71 ASVTTVNVNDYGAKGDG-SDATEAFKKAWEAACSSQG--SVLVVPKNNYLLKPITFEGPC 127
Query: 82 KASISFQLQGLLDL------FSIDTSLSL-----------AKGTFHGQGETAWPLNQCHK 124
K+SI+ Q+ G L +S D + L GT +G G+ W N C
Sbjct: 128 KSSITVQIYGTLQASTDRSAYSNDXTRWLVFENVQNLAVQGGGTINGNGKIWWE-NSCKV 186
Query: 125 NSD--CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--- 178
+ D C+ PT + F + + +K +++ H++ C ++ + L +TA DS
Sbjct: 187 DDDLSCKDAPTALTFYNCKNLVVKNLKIENAQQIHVSFEKCVGVQASGLTVTAPGDSPNT 246
Query: 179 ------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEE 208
++++ + + CGPG GIS+GSLG G +
Sbjct: 247 DGIHVTDTQNIQISSSVIGTGDDCISIVSGTQNLQATGITCGPGHGISIGSLGYGNSEAL 306
Query: 209 VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
V +TV T + T+NGVR+KTWP G ASN F++I M++V+NPI+I+Q YC +K
Sbjct: 307 VSDITVNGATLSGTTNGVRIKTWPGGS-GSASNIKFQNIEMHDVDNPIIINQKYCDDDK 364
>gi|225441690|ref|XP_002277234.1| PREDICTED: polygalacturonase [Vitis vinifera]
gi|297739722|emb|CBI29904.3| unnamed protein product [Vitis vinifera]
Length = 441
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 145/299 (48%), Gaps = 58/299 (19%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPC 81
A+ +NV D+GA DG +D ++AF +W A + G ++VP YL+ FEGPC
Sbjct: 71 ASVTTVNVNDYGAKGDG-SDATEAFKKAWEAACSSQG--SVLVVPKNNYLLKPITFEGPC 127
Query: 82 KASISFQLQGLLDLFSIDTSLS-----------------LAKGTFHGQGETAWPLNQCHK 124
K+SI+ Q+ G L + ++ S GT +G G+ W N C
Sbjct: 128 KSSITVQIYGTLQASTDRSAYSNDLTRWLVFENVQNLAVQGGGTINGNGKIWWE-NSCKV 186
Query: 125 NSD--CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--- 178
+ D C+ PT + F + + +K +++ H++ C ++ + L +TA DS
Sbjct: 187 DDDLSCKDAPTALTFYNCKNLVVKNLKIENAQQIHVSFEKCVGVQASGLTVTAPGDSPNT 246
Query: 179 ------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEE 208
++++ + + CGPG GIS+GSLG G +
Sbjct: 247 DGIHVTDTQNIQISSSVIGTGDDCISIVSGTQNLQATGITCGPGHGISIGSLGYGNSEAL 306
Query: 209 VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
V +TV T + T+NGVR+KTWP G ASN F++I M++V+NPI+I+Q YC +K
Sbjct: 307 VSDITVNGATLSGTTNGVRIKTWPGGS-GSASNIKFQNIEMHDVDNPIIINQKYCDDDK 364
>gi|62910157|gb|AAY21049.1| PGN [Glycine max]
Length = 402
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 165/358 (46%), Gaps = 80/358 (22%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKA-S 84
NV D+GA +G TDDS+AF +W++A N T+L+P K +++ F GPCK +
Sbjct: 30 FNVIDYGATGNGQTDDSQAFLKAWKDACNASYGTATLLIPKEKTFMLQPVLFRGPCKPPT 89
Query: 85 ISFQLQGLL------DLFSIDTSLSLAK----------------GTFHGQGETAWPLNQC 122
+ +L+G + + + + S +A G GQG W
Sbjct: 90 VHIKLKGTIIAPNKIEAWKLPKSTRMAWIRFRHISGLVIRGGGWGLIDGQGSPWW---NS 146
Query: 123 HKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---- 178
+ N++ + PT + F + ++G+ ++S HI+I C N ++ + + A +S
Sbjct: 147 YFNTEIKRPTALHFRECDYLFLSGLTHINSPKNHISINRCNNSLISKIHMIAPDESPNTD 206
Query: 179 ------SKDILVSE-----------------------VFCGPGQGISVGSLGKGIKDEEV 209
S +I++ VFCGPG GIS+GSLGK + V
Sbjct: 207 GIDISQSSNIVIKNSKMETGDDCIAINHGSTFISIIGVFCGPGHGISIGSLGKNGAHQTV 266
Query: 210 VGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPY-NKC 268
+ VRNCTF T+NG R+KTW G A TF+DI++ NP++IDQ Y PY N
Sbjct: 267 EEIYVRNCTFNRTTNGARIKTWIGGQ-GYARKITFKDIILMEATNPVIIDQQYNPYDNVG 325
Query: 269 NIKPKD-----------SMPNIE------IGNRNLVYNGVNV-KVEGPETTSLCSNVK 308
++ D SM I+ +G N+ G+N+ + G +T + C NVK
Sbjct: 326 GVRVSDVSYHNVRGTSSSMHAIKLHCDKSVGCTNIELKGINITTITGKKTYASCKNVK 383
>gi|169144941|gb|ACA49228.1| putative polygalacturonase [Olea europaea]
Length = 356
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 134/277 (48%), Gaps = 58/277 (20%)
Query: 41 DDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEG-PCK-ASISFQLQGLLDL--- 95
D SKAF ++W A T+ VPPG+YL+ A F G CK +I+ Q+ G L
Sbjct: 3 DCSKAFLSAWTSACA-STQPATIYVPPGRYLLGAATFAGKSCKNTAITIQIDGTLVAPSD 61
Query: 96 ------------FSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPT---PIRFNFLN 140
F T +S+ GT +GQG W KNS PT + F N
Sbjct: 62 FNVIGNSGNWIKFESVTGVSVIGGTLNGQGANLWAC----KNSGKSCPTGATTLAFYNSN 117
Query: 141 DSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---------------------- 178
+ + G+ S++S+ F+I + GC+N KL +K++A +S
Sbjct: 118 NIIMNGLFSINSQKFNILVDGCHNAKLVGIKVSAPGNSPNTDGIHVEKSTGVKIMNSQIG 177
Query: 179 -----------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVR 227
+ ++ + + CGPG GIS+GSLG +++ V +TV++ TFT T NG R
Sbjct: 178 TGDDCVSIGPGTSNLWIETIACGPGHGISIGSLGWDLQEPGVQNVTVKSATFTGTQNGAR 237
Query: 228 VKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
VKTW G N F+ +VM NV+NPI+IDQ YCP
Sbjct: 238 VKTWARPSNGFVKNILFQHLVMVNVQNPIIIDQNYCP 274
>gi|449442583|ref|XP_004139061.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 393
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 133/290 (45%), Gaps = 50/290 (17%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKA-SI 85
++ + GA D TD S A ++W A + TV VP G++ V F GPC SI
Sbjct: 27 FDIVNLGAKPDCKTDASHALQSAWARACA-SKVASTVYVPKGRFYVQSGNFIGPCNNNSI 85
Query: 86 SFQLQGLLDL---------------FSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQL 130
+F + G L FS LS+ G GQG T W N+
Sbjct: 86 TFLIDGTLVASSDFTVLAKSRTWISFSHINGLSIYGGVLDGQGTTLWACKNSGINTCSLG 145
Query: 131 PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADSSK 180
T + + + I G+ SV+S+ +HI + C ++K+ +K+ A H + S
Sbjct: 146 ATTLEVSDSQNILINGLSSVNSQMYHIVVYDCQDVKIQGVKVLAASNSPNTDGIHVERSS 205
Query: 181 DILV-----------------------SEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNC 217
++ + + CGPG GIS+GSLGK ++ V +T++
Sbjct: 206 NVAILNSNISTGDDCISIGPGTSHLWMERLACGPGHGISIGSLGKWWEEAGVKNVTLKTA 265
Query: 218 TFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
F T NGVR+K+W G A N F+ IV++NV NP++IDQ YCP+N+
Sbjct: 266 HFKGTMNGVRIKSWGRPSNGSAKNILFQHIVLDNVTNPLIIDQNYCPHNQ 315
>gi|297741981|emb|CBI33426.3| unnamed protein product [Vitis vinifera]
Length = 371
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 149/325 (45%), Gaps = 58/325 (17%)
Query: 31 DFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPC-KASISFQL 89
++GAV DG TDDS+AF +W EA N + T+ VP +L++ EF GPC SI FQ+
Sbjct: 2 NYGAVGDGKTDDSQAFLKAWNEACNVQQQRATLNVPARTFLLNPIEFSGPCVPTSIEFQV 61
Query: 90 QG---------LLD-----LFSIDTSLSL-AKGTFHGQGETAWPLNQCHKNSDCQLPTPI 134
G L D LFS L+L GT GQG +W S L +
Sbjct: 62 AGKIIASTNKSLFDNNHWILFSYVKGLTLTGSGTIDGQGAGSWQDRTGVAISHV-LGQAL 120
Query: 135 RFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSSKD------------- 181
+F + + G+ ++ + HI + C +N + ITA D+
Sbjct: 121 KFYTCPNLVLQGLTHINPQKAHIILTKCDGANINSITITAPEDAPNTDGIDIASSNHVQV 180
Query: 182 --------------------ILVSEVFCGPGQGISVGSLGK-GIKDEEVVG-LTVRNCTF 219
I ++ V CGPG GIS+GSLG G D + V + VR+C F
Sbjct: 181 QNSKIGTGDDCIAISARCSFINITGVTCGPGHGISIGSLGDPGSGDFDTVSEVHVRSCNF 240
Query: 220 TCT-SNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPN 278
T T + G+R+KTW G T+EDI+ +NV PIVIDQ YCP+N C K++
Sbjct: 241 TGTNTTGIRIKTWQGGQ-GEVKKITYEDIMFDNVRYPIVIDQFYCPHNVC----KNNTGT 295
Query: 279 IEIGNRNLVYNGVNVKVEGPETTSL 303
+ ++ Y G+ G E SL
Sbjct: 296 SAVAISDVSYTGIIGTSSGDEVMSL 320
>gi|449458389|ref|XP_004146930.1| PREDICTED: probable polygalacturonase At3g15720-like [Cucumis
sativus]
Length = 330
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 146/316 (46%), Gaps = 71/316 (22%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK 60
LL AA F ++ ++S + +++ NV D+GA+ +G TDDSKAF +W +
Sbjct: 3 LLSAAIFLYSIAILSSWTVLGSSD--FNVLDYGAIGNGKTDDSKAFLKAWNDVCGATEES 60
Query: 61 GTVLVPPGK-YLVSFAEFEGPCKASISFQLQGLLDLFSIDTSLSLAKGT----------- 108
T+ VP GK YL++ +F+GPCK+ QL G L + D +S KG
Sbjct: 61 PTLHVPDGKTYLLNPLKFQGPCKSK---QLGGTLMAPTKDEWISDGKGQWIQFFDIEGLN 117
Query: 109 ------FHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGC 162
F GQG W + F+ N + G+K ++S HI+I C
Sbjct: 118 LQGGGRFDGQGSLWWK--------------ALFFHNCNGLQMKGMKHINSAKNHISINMC 163
Query: 163 YNLKLNDLKITAHADS----------SKDILVSEVF-----------------------C 189
+++ + L I+A DS S +I + + F C
Sbjct: 164 HDVIFSHLHISAPEDSPNTDGIDISESTNIFIEDSFMATGDDCIAINNGSSNININGITC 223
Query: 190 GPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVM 249
GPG GIS+GSLGK + V + V NC T NG+R+KTW + G A N TFE I M
Sbjct: 224 GPGHGISIGSLGKDGEYNVVENVHVSNCLLRSTQNGIRIKTWEGGY-GYAKNITFEKITM 282
Query: 250 NNVENPIVIDQLYCPY 265
N +NPI+IDQ Y Y
Sbjct: 283 KNAKNPIIIDQYYSSY 298
>gi|242052709|ref|XP_002455500.1| hypothetical protein SORBIDRAFT_03g012280 [Sorghum bicolor]
gi|241927475|gb|EES00620.1| hypothetical protein SORBIDRAFT_03g012280 [Sorghum bicolor]
Length = 506
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 134/303 (44%), Gaps = 66/303 (21%)
Query: 29 VKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGPCKASISF 87
VKDFGAV DG+TDD+ A T+W A DG VL G +LV F GPC+ S++
Sbjct: 111 VKDFGAVGDGVTDDTDAVKTAWDTACQDDG-DSVVLAAAGYSFLVHSTVFTGPCQGSVTI 169
Query: 88 QLQGLLD-----------------LFSIDTSLSL-AKGTFHGQGETAWPLNQCHKNS--- 126
QL G + LF +SL G G+G+ W L C
Sbjct: 170 QLDGTIVAPSDPDKWPANSKRNWLLFYQAHGMSLKGAGLIDGKGQKWWEL-PCKSQKGHG 228
Query: 127 -------DCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----- 174
C P +RF N+ T+ G+K +S FHI C + + L I++
Sbjct: 229 GSSGHGAACDSPVAMRFFMTNNVTLQGLKVQNSPEFHIRFDSCRGVVASGLSISSPALSP 288
Query: 175 -----HADSSKDIL-----------------------VSEVFCGP-GQGISVGSLGKGIK 205
H ++S+D++ V V CGP G GIS+GSLGK
Sbjct: 289 NTDGIHVENSQDVVITNTAVSNGDDCVSIGAGTLNMHVENVTCGPGGHGISIGSLGKQGS 348
Query: 206 DEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPY 265
V +TVRN + NGVR+KTW G S +FE++ M+ V NPI+IDQ YC
Sbjct: 349 RACVANVTVRNAVIRHSDNGVRIKTWQGGS-GAVSAVSFENVRMDAVRNPIIIDQYYCLS 407
Query: 266 NKC 268
C
Sbjct: 408 KSC 410
>gi|224117746|ref|XP_002331621.1| predicted protein [Populus trichocarpa]
gi|222874017|gb|EEF11148.1| predicted protein [Populus trichocarpa]
Length = 396
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 142/292 (48%), Gaps = 57/292 (19%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCK-ASIS 86
+V +GA DG TD +KAF +W +A T+ VP G + + F+GPCK +I
Sbjct: 33 SVLSYGAKPDGKTDATKAFAAAWAQACASA-QPATISVPKGSFSLGQVRFQGPCKNRAIL 91
Query: 87 FQLQGLLD---------------LFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLP 131
++ G L +F ++++ GT GQG W KNS P
Sbjct: 92 VRIDGTLVAPSDYKVIGNAKNWLMFEHVNGVTVSGGTLDGQGAGLWSC----KNSGKGCP 147
Query: 132 ---TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADS 178
T + F+ N+ ITG+ S++S+ FHI I GC N+K+ +K++A H S
Sbjct: 148 RGATSLEFSNSNNIAITGLASLNSQLFHIVIHGCQNVKVQGVKVSAAGNSPNTDGIHVQS 207
Query: 179 SKDIL-----------------------VSEVFCGPGQGISVGSLGKGIKDEEVVGLTVR 215
S + + V CGPG GIS+GSLGK ++ V +TV+
Sbjct: 208 STGVTILNSRIGTGDDCVSIGPGTSSLWIENVACGPGHGISIGSLGKESQEAGVQNVTVK 267
Query: 216 NCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
TFT T NG+R+K+W G A + F+ VMNNV+NPIVIDQ YCP K
Sbjct: 268 TSTFTGTENGLRIKSWGRPSNGFARDILFQHAVMNNVQNPIVIDQNYCPGEK 319
>gi|224090225|ref|XP_002308956.1| predicted protein [Populus trichocarpa]
gi|222854932|gb|EEE92479.1| predicted protein [Populus trichocarpa]
Length = 443
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 171/367 (46%), Gaps = 71/367 (19%)
Query: 2 LLAARFSLLVSF--ITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGI 59
L+ R +L+S + V G + R +NVKDFGA A G DD++ + +W+EA +
Sbjct: 50 LVKLRSDVLISLQAFSKVGGKSTSVRTVNVKDFGAKAVG-GDDTETIEKAWKEACS-SSE 107
Query: 60 KGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLLD-----------------LFSIDTSL 102
V+VP Y + F+GPCK++I+ Q+ G+++ SI
Sbjct: 108 GAIVVVPRYTYRLKPITFQGPCKSNITLQVNGVIEASDDLSDYKEDGRHWLVFDSIQNLQ 167
Query: 103 SLAKGTFHGQGETAWPLNQCH--KNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFH--- 156
GT G G+ W N C KN C+ PT I F + + +K +++ H
Sbjct: 168 VEGGGTIDGNGKIWWQ-NSCKVDKNLPCKDAPTAITFYECQNLVVKNLKIQNAQQMHVSF 226
Query: 157 ------------------------INILGCYNLKLNDLKITAHAD------SSKDILVSE 186
I++ G N+++ D I D S+++ S+
Sbjct: 227 EKSNGVQVSNLTVTSPEGSPNTDGIHVAGTQNIQITDSVIGTGDDCISIVSGSQNVQASD 286
Query: 187 VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFED 246
+ CGPG GIS+GSLG ++ V G+TV F+ T+NGVR+KTW G A N F +
Sbjct: 287 ITCGPGHGISIGSLGVHNSEDYVSGVTVNGAKFSGTTNGVRIKTWQGGS-GSARNIEFLN 345
Query: 247 IVMNNVENPIVIDQLYCPYNK-CNIKPKDSMPNIEIGNRNLVYNGVNVKVEGPETTSL-- 303
I MNNV NPI+IDQ YC ++ C ++ +++ +N+VY N+K G ++
Sbjct: 346 IEMNNVTNPIIIDQNYCDQDEPC----EEQRSAVQV--KNVVYK--NIKGTGASEVAIKF 397
Query: 304 -CSNVKP 309
CS P
Sbjct: 398 DCSKTYP 404
>gi|449526373|ref|XP_004170188.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Cucumis
sativus]
Length = 393
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 133/290 (45%), Gaps = 50/290 (17%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKA-SI 85
++ + GA D TD S A ++W A + TV VP G++ V F GPC SI
Sbjct: 27 FDIVNLGAKPDCKTDASHALQSAWARACA-SKVASTVYVPKGRFYVQSGNFIGPCNNNSI 85
Query: 86 SFQLQGLLDL---------------FSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQL 130
+F + G L FS LS+ G GQG T W N+
Sbjct: 86 TFLIDGTLVASSDFTVLAKSRTWISFSHINGLSIYGGVLDGQGTTLWACKNSGINTCSLG 145
Query: 131 PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADSSK 180
T + + + I G+ SV+S+ +HI + C ++K+ +K+ A H + S
Sbjct: 146 ATTLEVSDSQNILINGLSSVNSQMYHIVVYDCQDVKIQGVKVLAASNSPNTDGIHVERSS 205
Query: 181 DILV-----------------------SEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNC 217
++ + + CGPG GIS+GSLGK ++ V +T++
Sbjct: 206 NVAILNSNISTGDDCISIGPGTSHLWMERLACGPGHGISIGSLGKWWEEAGVKNVTLKTA 265
Query: 218 TFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
F T NGVR+K+W G A N F+ IV++NV NP++IDQ YCP+N+
Sbjct: 266 HFKGTMNGVRIKSWGRPSNGSAKNILFQHIVLDNVTNPLIIDQNYCPHNQ 315
>gi|166951|gb|AAA32914.1| polygalacturonase [Persea americana]
Length = 453
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 121/412 (29%), Positives = 184/412 (44%), Gaps = 108/412 (26%)
Query: 6 RFSLLVSFITSVRGIDATNRV----------LNVKDFGAVADGITDDSKAFDTSWREAWN 55
FS ++ F S+ ++ N V ++V DFGA DG TDD+KAF+ +W++A +
Sbjct: 54 EFSSIMGFEPSILSLERFNPVGGPETSPDTDISVDDFGARGDG-TDDTKAFEKAWKDACS 112
Query: 56 WDGIKGTVLVPP--GKYLVSFAEFEGPCKASISFQLQGLLDL-----------------F 96
G+VL+ P YL+ F GPCK+ + +++G ++ F
Sbjct: 113 ----SGSVLIVPENKNYLLKQITFSGPCKSDLRVKIRGTIEASSDQSDWVGHNRKRWIEF 168
Query: 97 SIDTSLSL-AKGTFHGQGETAWPLNQCHKNS-DCQ-LPTPIRFNFLNDSTITGIKSVDSR 153
++L+L GT +G GET W + K S C+ PT + F + ++ + DS+
Sbjct: 169 EDISNLTLEGGGTINGNGETWWDSSCKRKKSLPCKSAPTALTFRSCKNLIVSDLSIKDSQ 228
Query: 154 YFHINILGCYNLKLNDLKITAHADS---------------------------------SK 180
H++ C ++ ++L +TA S SK
Sbjct: 229 KMHLSFDKCQDVIASNLMVTAPEHSPNTDGIHITGTQRIHVMNSVIGTGDDCISIESGSK 288
Query: 181 DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIAS 240
++ + + CGPG GIS+GSLG + V G+ V T+NG+R+KTW G A
Sbjct: 289 MVIATNITCGPGHGISIGSLGDRNSEAHVSGVLVDGGNLFDTTNGLRIKTWQGGS-GSAK 347
Query: 241 NFTFEDIVMNNVENPIVIDQLY------CPYNKCNIKPKD-------------------- 274
N F++IVM+NV NPI+IDQ Y CP + +K +
Sbjct: 348 NIKFQNIVMHNVTNPIIIDQYYCDSKDPCPEQESAVKVSNVAYMNIRGTSASEVAVKFDC 407
Query: 275 --SMP--NIEIGNRNLVYNGVNVKVEGPETTSLCSN-VKPTLFGKQIPATCV 321
S P I + N NLV NG G ETT CSN V+ T GK P +C+
Sbjct: 408 SKSSPCQGILLENINLVGNG------GKETTMSCSNIVQGTTEGKVYPPSCL 453
>gi|7959983|gb|AAF71160.1|AF152758_1 polygalacturonase A [Actinidia chinensis]
Length = 463
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 145/303 (47%), Gaps = 58/303 (19%)
Query: 18 RGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEF 77
R +DA+ + +NV DFGA DG +DD+KAF+ +W+ + +LVP YLV F
Sbjct: 82 RVLDAS-KTVNVDDFGAKGDG-SDDTKAFEKAWKAVCSSTS-SAVLLVPQKNYLVRPITF 138
Query: 78 EGPCKASISFQLQGLLDL------FSIDTSLSL-----------AKGTFHGQGETAWPLN 120
GPCK+ ++ Q+ G L+ +S D L GT +G G+ W N
Sbjct: 139 SGPCKSDLTMQIYGTLEASDDRSDYSKDGRHWLVFDSVQNLRVEGGGTINGNGQIWWQ-N 197
Query: 121 QCHKNSD--CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA--- 174
C N C+ PT + F + +K +++ H++ C N++ ++L +T
Sbjct: 198 SCKTNKTLPCKDAPTALTFYKSKHVIVKNLKIENAQQIHVSFDNCVNVQASNLMVTTPEN 257
Query: 175 -------HADSSKDILVS-----------------------EVFCGPGQGISVGSLGKGI 204
H +++I +S ++ CGPG GIS+GSLG G
Sbjct: 258 SPNTDGIHVTGTQNIHISSCVIETGDDCISIVSGGQKVRVNDITCGPGHGISIGSLGYGN 317
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
+ V + V T+NGVR+KTW G ASN F+++ M+NVENPI+IDQ YC
Sbjct: 318 SEAHVSDVVVNGAKLCGTTNGVRIKTWQGGS-GSASNIKFQNVEMHNVENPIIIDQNYCD 376
Query: 265 YNK 267
+K
Sbjct: 377 QDK 379
>gi|357129594|ref|XP_003566446.1| PREDICTED: polygalacturonase-like [Brachypodium distachyon]
Length = 424
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 138/296 (46%), Gaps = 58/296 (19%)
Query: 23 TNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPC 81
+N V +V +GA+ DG DD+K +W A + VL+P GK YL F GPC
Sbjct: 45 SNSVFDVLRYGALGDGHHDDTKGLAKAWAAACS-SSHPSIVLLPKGKKYLTKHVTFSGPC 103
Query: 82 KASISFQLQGLLD-----------------LFSIDTSLSLAK-GTFHGQGETAWPLNQCH 123
K++I+F ++G L LF L++ GT G G+ W N C
Sbjct: 104 KSNINFMIEGTLVAPPKRSYWIEATIRHWILFKAVRGLTVTGVGTIDGNGKLWWQ-NSCK 162
Query: 124 KNSDC---QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA---- 176
NS Q PT + F + + +K ++S+ H+++ C ++++ L ITA +
Sbjct: 163 VNSKLPCRQSPTALTFYSCTNLKVNNLKLLNSQQIHMSVERCTDVRIFRLSITAPSSSPN 222
Query: 177 -----------------------------DSSKDILVSEVFCGPGQGISVGSLGKGIKDE 207
D +K++ V + CGPG GIS+GSLG +
Sbjct: 223 TDGIHIAHSKGVKVRNCMIRTGDDCLSIEDGTKNLHVKNIVCGPGHGISIGSLGDQNSEA 282
Query: 208 EVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
+V +T+ T+NG R+KTW G A N F++++M+NV NPI+IDQ YC
Sbjct: 283 QVANITIDGVRLHGTTNGARIKTWQGGR-GYAKNIVFQNMIMDNVWNPIIIDQNYC 337
>gi|414873526|tpg|DAA52083.1| TPA: hypothetical protein ZEAMMB73_529440 [Zea mays]
Length = 475
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 164/377 (43%), Gaps = 84/377 (22%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
V ++ +GA DG DD+ A +W EA +LVP G+ YL+ GPC++
Sbjct: 67 VFSLDRYGARGDGRHDDTGALARAW-EAACASPRPAVLLVPGGRRYLLKLVVLRGPCRSR 125
Query: 85 ISFQLQGLLD------------------LFSIDTSLSLAKGTFHGQGETAWPLN-QCHKN 125
++ ++G L S+D +G+ G G + WP + + +K
Sbjct: 126 VAVTVKGTLVASPNRADWSDSDRRHWIVFRSVDRLTVHGRGSIDGNGHSWWPHSCKINKA 185
Query: 126 SDCQL-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA---------- 174
C+ PT + F++ + + +K ++S+ H++I C +++++ L ITA
Sbjct: 186 LPCKAAPTALSFHYCTNLRVENLKMMNSQQIHMSIEDCASVQVSRLSITAPGTSPNTDGI 245
Query: 175 HADSSKDILV-----------------------SEVFCGPGQGISVGSLGKGIKDEEVVG 211
H SKD+ V S V CGPG GISVGSLG EV G
Sbjct: 246 HITRSKDVRVTNCKIKTGDDCMSIEDGTHGLHVSGVVCGPGHGISVGSLGDDDSRAEVSG 305
Query: 212 LTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK 271
+T+ + T+NG R+KT+ G A + TF+++ M+ V NPIVIDQ YC +
Sbjct: 306 ITIDSVQLHGTTNGARIKTYQGGS-GYARDITFQNMAMHGVRNPIVIDQSYCDRAEAEPP 364
Query: 272 PKDSMPNIEIGN--------------------------RNLVYNGVNVKVEGPE--TTSL 303
++ ++I + R +V +++K++G + S
Sbjct: 365 CREQRSAVQISDVVFRNIRGTTVTRDAIRMSCSRDVPCRGIVLQNIDLKMQGGKGHAEST 424
Query: 304 CSNVKPTLFGKQIPATC 320
C N K GK +P C
Sbjct: 425 CQNAKWRKSGKVVPQPC 441
>gi|356555327|ref|XP_003545985.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 437
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 154/324 (47%), Gaps = 66/324 (20%)
Query: 23 TNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPC 81
+ R +N+ D+GA A DD++AF+ +W EA + GI ++VP K Y + F GPC
Sbjct: 62 SQRRINIDDYGAKASDGRDDTEAFEKAWDEACSTGGI---LVVPEEKIYHLKPITFSGPC 118
Query: 82 KASISFQLQGLLDL----------------FSIDTSLSL-AKGTFHGQGETAWPLNQCHK 124
+ +F++ G + F T+L + GT +G G W N C +
Sbjct: 119 LTNTAFRVYGTIKAWPKMSTYQNDRLHWIKFENVTNLRVDGGGTINGNGRKWWE-NSCKR 177
Query: 125 NSD--CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA------- 174
N + C+ PT + F N+ +T ++ +++ HI C N+ ++L + A
Sbjct: 178 NENLPCKPAPTAVTFYQCNNLRVTNLRFKNAQQMHIRFQKCNNVTASNLIVRAPGNSPNT 237
Query: 175 ---HADSSKDILVS-----------------------EVFCGPGQGISVGSLGKGIKDEE 208
H +++IL+S +V CGPG GIS+GSLG G +
Sbjct: 238 DGIHVTETRNILISNSIIGTGDDCISIVSGSQNVRAIDVKCGPGHGISIGSLGAGDSKAQ 297
Query: 209 VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK- 267
V + V TFT T+NGVR+KTW G A N F +I M NV NPI++DQ YC +K
Sbjct: 298 VSNVLVNRATFTGTTNGVRIKTWQGGS-GYAKNVKFVNITMRNVTNPIIVDQNYCDQDKP 356
Query: 268 CNIKPKDSMPNIEIGNRNLVYNGV 291
C+ KDS + N+VY +
Sbjct: 357 CH--EKDSAVKLS----NIVYQNI 374
>gi|255553564|ref|XP_002517823.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223543095|gb|EEF44630.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 446
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 145/296 (48%), Gaps = 58/296 (19%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGP 80
++ +++NV+DFGA ADG TD S+AF +W EA + + ++VP K Y + +F GP
Sbjct: 75 SSTKIVNVEDFGAKADG-TDASEAFKKAWEEACSSEE-SAIIVVPKNKIYYLKPVKFSGP 132
Query: 81 CKASISFQLQGLLD----------------LFSIDTSLSL-AKGTFHGQGETAWPLNQCH 123
C++ + F++ G + +F +L + GT +G G+ W N C
Sbjct: 133 CQSDLIFKIYGTIKASVKMRDYEKDRRHWIVFDNVENLRVKGGGTINGNGKMWWD-NSCK 191
Query: 124 --KNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-- 178
K+ C PT + F+ + + + +++ H+ C N++ +L +TA S
Sbjct: 192 IDKSKPCIGAPTAVTFSDCKNLIVANLWFQNAQQMHLTFQKCKNVRALNLIVTAPGKSPN 251
Query: 179 -------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDE 207
SK++ +++ CGPG GIS+GSLG G +
Sbjct: 252 TDGIHVTSTQNIRIRNCVIRTGDDCLSIESGSKNVEATDIVCGPGHGISIGSLGDGNSEA 311
Query: 208 EVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
EV + V T + T+NGVR+KTW G A N F++IVMNNV NPI+IDQ YC
Sbjct: 312 EVSNVLVNRATLSGTTNGVRIKTWQGGS-GFAKNIVFQNIVMNNVTNPIIIDQNYC 366
>gi|18400876|ref|NP_566524.1| polygalacturonase [Arabidopsis thaliana]
gi|75311636|sp|Q9LW07.1|PGLR3_ARATH RecName: Full=Probable polygalacturonase At3g15720; Short=PG;
AltName: Full=Pectinase At3g15720; Flags: Precursor
gi|11994344|dbj|BAB02303.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332642197|gb|AEE75718.1| polygalacturonase [Arabidopsis thaliana]
Length = 456
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 146/307 (47%), Gaps = 60/307 (19%)
Query: 20 IDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFE 78
I ++ L+V FGAV DG+TDDS+AF +W + G G +VP G +++ +F+
Sbjct: 17 IFTSSNALDVTQFGAVGDGVTDDSQAFLKAWEAVCSGTG-DGQFVVPAGMTFMLQPLKFQ 75
Query: 79 GPCKASISF-QLQGLL---------------DLFS-IDTSLSLAKGTFHGQGETAWPLNQ 121
G CK++ F Q+ G L LF+ I+ + G +GQG + W
Sbjct: 76 GSCKSTPVFVQMLGKLVAPSKGNWKGDKDQWILFTDIEGLVIEGDGEINGQGSSWWE--- 132
Query: 122 CHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--- 178
HK S PT ++F N+ ++G+ +DS HI+I C + ++ L+I A S
Sbjct: 133 -HKGSR---PTALKFRSCNNLRLSGLTHLDSPMAHIHISECNYVTISSLRINAPESSPNT 188
Query: 179 ------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEE 208
+ +I +S + CGPG GIS+GSLGK +
Sbjct: 189 DGIDVGASSNVVIQDCIIATGDDCIAINSGTSNIHISGIDCGPGHGISIGSLGKDGETAT 248
Query: 209 VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
V + V+NC F T NG R+KTW G A TF I ++NVENPI+IDQ Y +
Sbjct: 249 VENVCVQNCNFRGTMNGARIKTWQGGS-GYARMITFNGITLDNVENPIIIDQFYNGGDSD 307
Query: 269 NIKPKDS 275
N K + S
Sbjct: 308 NAKDRKS 314
>gi|297802374|ref|XP_002869071.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314907|gb|EFH45330.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 395
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 138/293 (47%), Gaps = 58/293 (19%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS-I 85
NV +F A DG TDDSKAF +W A DG T+L+P K +L+ F+GPCK+S I
Sbjct: 25 NVLNFDAKGDGQTDDSKAFLQAWTAACGGDGDIKTLLIPSDKTFLLQPTVFQGPCKSSSI 84
Query: 86 SFQLQGLLDL-----------------FSIDTSLSL-AKGTFHGQGETAWPLNQCHKNSD 127
QL G + FS + L++ GT +G + W LN
Sbjct: 85 KVQLDGAIVAPSDKVAWSDPISRMWIKFSTVSGLTIVGSGTIDSRGSSFWELNL----KA 140
Query: 128 CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--------- 178
Q PT + + ++ I GI S+DS HI+I C + ++++ + A S
Sbjct: 141 SQRPTALHISKCDNLRINGITSIDSPKNHISIKTCNTVAISNINLFAPETSPNTDGIDIS 200
Query: 179 ------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTV 214
S +I ++ + CGPG GISVGSLG G + +V + V
Sbjct: 201 DSTNINIFDSTIQTGDDCIAINSGSSNINITGINCGPGHGISVGSLGAGGAEAKVSDVHV 260
Query: 215 RNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
+CTF T+NG R+KTW G A N +F DI + N +NPI+IDQ Y K
Sbjct: 261 THCTFNQTTNGARIKTWLGGQ-GYARNISFTDITLINTKNPIIIDQQYIDKGK 312
>gi|24898904|dbj|BAC23082.1| allergen Cry j 2 [Cryptomeria japonica]
gi|114841595|dbj|BAF32099.1| pollen allergen [Cryptomeria japonica]
gi|114841601|dbj|BAF32102.1| pollen allergen [Cryptomeria japonica]
gi|114841625|dbj|BAF32114.1| pollen allergen [Cryptomeria japonica]
gi|114841631|dbj|BAF32117.1| pollen allergen [Cryptomeria japonica]
gi|114841637|dbj|BAF32120.1| pollen allergen [Cryptomeria japonica]
gi|114841639|dbj|BAF32121.1| pollen allergen [Cryptomeria japonica]
Length = 514
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 141/299 (47%), Gaps = 61/299 (20%)
Query: 21 DATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG--KYLVSFAEFE 78
DA N + NV+ +GAV DG D ++AF T+W+ A +L+ PG K++V+ F
Sbjct: 54 DAIN-IFNVEKYGAVGDGKHDCTEAFSTAWQAACK---KPSAMLLVPGNKKFVVNNLFFN 109
Query: 79 GPCKASISFQLQGLLDLFSIDTSLS----------------LAKGTFHGQGETAWP---- 118
GPC+ +F++ G++ + S + KG GQG+ W
Sbjct: 110 GPCQPHFTFKVDGIIAAYQNPASWKNNRIWLQFAKLTGFTLMGKGVIDGQGKQWWAGQCK 169
Query: 119 -LNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD 177
+N +D PT I+F+F I G+K ++S FH+ C +K+ + ITA D
Sbjct: 170 WVNGREICNDRDRPTAIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPRD 229
Query: 178 S---------------------------------SKDILVSEVFCGPGQGISVGSLGKGI 204
S S +I++ ++ CGPG GIS+GSLG+
Sbjct: 230 SPNTDGIDIFASKNFHLQKNTIGTGDDCVAIGTGSSNIVIEDLICGPGHGISIGSLGREN 289
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
EV + V F T NG+R+KTW G+AS+ +E++ M N ENPI+I+Q YC
Sbjct: 290 SRAEVSYVHVNGAKFIDTQNGLRIKTWQGGS-GMASHIIYENVEMINSENPILINQFYC 347
>gi|1171004|sp|P43212.1|PGLR2_CRYJA RecName: Full=Polygalacturonase; Short=PG; AltName: Full=Allergen
Cry j II; AltName: Full=Major pollen allergen Cry j 2;
AltName: Full=Pectinase; AltName: Allergen=Cry j 2;
Flags: Precursor
gi|577696|dbj|BAA07021.1| Cry j II precursor [Cryptomeria japonica]
Length = 514
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 141/299 (47%), Gaps = 61/299 (20%)
Query: 21 DATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG--KYLVSFAEFE 78
DA N + NV+ +GAV DG D ++AF T+W+ A +L+ PG K++V+ F
Sbjct: 54 DAIN-IFNVEKYGAVGDGKHDCTEAFSTAWQAACK---KPSAMLLVPGNKKFVVNNLFFN 109
Query: 79 GPCKASISFQLQGLLDLFSIDTSLS----------------LAKGTFHGQGETAWP---- 118
GPC+ +F++ G++ + S + KG GQG+ W
Sbjct: 110 GPCQPHFTFKVDGIIAAYQNPASWKNNRIWLQFAKLTGFTLMGKGVIDGQGKQWWAGQCK 169
Query: 119 -LNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD 177
+N +D PT I+F+F I G+K ++S FH+ C +K+ + ITA D
Sbjct: 170 WVNGREICNDRDRPTAIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPRD 229
Query: 178 S---------------------------------SKDILVSEVFCGPGQGISVGSLGKGI 204
S S +I++ ++ CGPG GIS+GSLG+
Sbjct: 230 SPNTDGIDIFASKNFHLQKNTIGTGDDCVAIGTGSSNIVIEDLICGPGHGISIGSLGREN 289
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
EV + V F T NG+R+KTW G+AS+ +E++ M N ENPI+I+Q YC
Sbjct: 290 SRAEVSYVHVNGAKFIDTQNGLRIKTWQGGS-GMASHIIYENVEMINSENPILINQFYC 347
>gi|114841589|dbj|BAF32096.1| pollen allergen [Cryptomeria japonica]
gi|114841597|dbj|BAF32100.1| pollen allergen [Cryptomeria japonica]
gi|114841663|dbj|BAF32133.1| pollen allergen [Cryptomeria japonica]
Length = 514
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 141/299 (47%), Gaps = 61/299 (20%)
Query: 21 DATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG--KYLVSFAEFE 78
DA N + NV+ +GAV DG D ++AF T+W+ A +L+ PG K++V+ F
Sbjct: 54 DAIN-IFNVEKYGAVGDGKHDCTEAFSTAWQAACK---KPSAMLLVPGNKKFVVNNLFFN 109
Query: 79 GPCKASISFQLQGLLDLFSIDTSLS----------------LAKGTFHGQGETAWP---- 118
GPC+ +F++ G++ + S + KG GQG+ W
Sbjct: 110 GPCQPHFTFKVDGIIAAYQNPASWKNNRIWLQFAKLTGFTLMGKGVIDGQGKQWWAGQCK 169
Query: 119 -LNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD 177
+N +D PT I+F+F I G+K ++S FH+ C +K+ + ITA D
Sbjct: 170 WVNGREICNDRDRPTAIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPRD 229
Query: 178 S---------------------------------SKDILVSEVFCGPGQGISVGSLGKGI 204
S S +I++ ++ CGPG GIS+GSLG+
Sbjct: 230 SPNTDGIDIFASKNFHLQKNTIGTGDDCVAIGTGSSNIVIEDLICGPGHGISIGSLGREN 289
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
EV + V F T NG+R+KTW G+AS+ +E++ M N ENPI+I+Q YC
Sbjct: 290 SRAEVSYVHVNGAKFIDTQNGLRIKTWQGGS-GMASHIIYENVEMINSENPILINQFYC 347
>gi|114841605|dbj|BAF32104.1| pollen allergen [Cryptomeria japonica]
gi|114841641|dbj|BAF32122.1| pollen allergen [Cryptomeria japonica]
Length = 514
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 141/299 (47%), Gaps = 61/299 (20%)
Query: 21 DATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG--KYLVSFAEFE 78
DA N + NV+ +GAV DG D ++AF T+W+ A +L+ PG K++V+ F
Sbjct: 54 DAIN-IFNVEKYGAVGDGKHDCTEAFSTAWQAACK---KPSAMLLVPGSKKFVVNNLFFN 109
Query: 79 GPCKASISFQLQGLLDLFSIDTSLS----------------LAKGTFHGQGETAWP---- 118
GPC+ +F++ G++ + S + KG GQG+ W
Sbjct: 110 GPCQPHFTFKVDGIIAAYQNPASWKNNRIWLQFAKLTGFTLMGKGVIDGQGKQWWAGQCK 169
Query: 119 -LNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD 177
+N +D PT I+F+F I G+K ++S FH+ C +K+ + ITA D
Sbjct: 170 WVNGREICNDRDRPTAIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPRD 229
Query: 178 S---------------------------------SKDILVSEVFCGPGQGISVGSLGKGI 204
S S +I++ ++ CGPG GIS+GSLG+
Sbjct: 230 SPNTDGIDIFASKNFHLQKNTIGTGDDCVAIGTGSSNIVIEDLICGPGHGISIGSLGREN 289
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
EV + V F T NG+R+KTW G+AS+ +E++ M N ENPI+I+Q YC
Sbjct: 290 SRAEVSYVHVNGAKFIDTQNGLRIKTWQGGS-GMASHIIYENVEMINSENPILINQFYC 347
>gi|114841635|dbj|BAF32119.1| pollen allergen [Cryptomeria japonica]
Length = 514
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 141/299 (47%), Gaps = 61/299 (20%)
Query: 21 DATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG--KYLVSFAEFE 78
DA N + NV+ +GAV DG D ++AF T+W+ A +L+ PG K++V+ F
Sbjct: 54 DAIN-IFNVEKYGAVGDGKHDCTEAFSTAWQAACK---KPSAMLLVPGNKKFVVNNLFFN 109
Query: 79 GPCKASISFQLQGLLDLFSIDTSLS----------------LAKGTFHGQGETAWP---- 118
GPC+ +F++ G++ + S + KG GQG+ W
Sbjct: 110 GPCQPHFTFKVDGIIAAYQNPASWKNNRIWLQFAKLTGFTLMGKGVIDGQGKQWWAGQCK 169
Query: 119 -LNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD 177
+N +D PT I+F+F I G+K ++S FH+ C +K+ + ITA D
Sbjct: 170 WVNGREICNDRDRPTAIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPRD 229
Query: 178 S---------------------------------SKDILVSEVFCGPGQGISVGSLGKGI 204
S S +I++ ++ CGPG GIS+GSLG+
Sbjct: 230 SPNTDGIDIFASKNFHLQKNTIGTGDDCVAIGTGSSNIVIEDLICGPGHGISIGSLGREN 289
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
EV + V F T NG+R+KTW G+AS+ +E++ M N ENPI+I+Q YC
Sbjct: 290 SRAEVSYVHVNGAKFIDTQNGLRIKTWQGGS-GMASHIIYENVEMINSENPILINQFYC 347
>gi|1419408|emb|CAA90272.1| Polygalacturonase [Brassica napus]
Length = 433
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 147/299 (49%), Gaps = 59/299 (19%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
++V +FGA DG TDD++AF +W++A + +G+ T L+P GK YL+ F GPCK+
Sbjct: 68 TVSVSNFGAKGDGKTDDTQAFKKAWKKACSTNGVT-TFLIPKGKTYLLKSIRFRGPCKSL 126
Query: 85 ISFQLQGLLDLFSIDTSLSLAK-------------------GTFHGQGETAWPLNQCH-- 123
SFQ+ G L + + S K G G G+ W N C
Sbjct: 127 RSFQILGTLSASTKRSDYSNDKNHWLILEDVNNLSIDGGSAGIVDGNGKIWWQ-NSCKID 185
Query: 124 KNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---- 178
K+ C + PT + LN+ + ++ +++ I+I C ++ + ++KITA DS
Sbjct: 186 KSKPCTKAPTALTLYNLNNLNVKNLRVRNAQQIQISIEKCNSVDVKNVKITAPGDSPNTD 245
Query: 179 -----------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEV 209
S+++ ++++ CGPG GIS+GSLG V
Sbjct: 246 GIHIVATKNIRISNSDIGTGDDCISIEDGSQNVQINDLTCGPGHGISIGSLGDDNSKAYV 305
Query: 210 VGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
G+ V T + T NGVR+KT+ G A N F++I M+NV+NPI+IDQ YC +KC
Sbjct: 306 SGINVDGATLSETDNGVRIKTYQGGS-GTAKNIKFQNIRMDNVKNPIIIDQNYCDKDKC 363
>gi|297839921|ref|XP_002887842.1| hypothetical protein ARALYDRAFT_477239 [Arabidopsis lyrata subsp.
lyrata]
gi|297333683|gb|EFH64101.1| hypothetical protein ARALYDRAFT_477239 [Arabidopsis lyrata subsp.
lyrata]
Length = 444
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 137/299 (45%), Gaps = 56/299 (18%)
Query: 23 TNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGPC 81
+ R+L+V FGA +G TDD+KAF +W+ A + +K +LVP L+ + GPC
Sbjct: 49 SERLLHVGKFGAKGNGFTDDTKAFADAWKTACS-SKVKTRILVPENYTCLLRPIDLSGPC 107
Query: 82 KASISFQLQGL------------------LDLFSIDTSLSLAKGTFHGQGETAWPLNQCH 123
KA ++ Q+ G L + GT +G G+ W + H
Sbjct: 108 KARLTLQISGTIIAPNDPDAWEGLNRRKWLYFHGLSRLTVEGGGTVNGMGQEWWTRSCKH 167
Query: 124 KNSD-CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--- 178
+S+ C+ PT I F+ + + + +DS+ HI C + ++ LK+ A A S
Sbjct: 168 NHSNPCRGAPTAITFHKCKNMRVENLNVIDSQQMHIAFTSCRRVAISGLKVIAPATSPNT 227
Query: 179 -------SKDILVSEV-----------------------FCGPGQGISVGSLGKGIKDEE 208
S+ I++ CGPG GIS+GSLGK EE
Sbjct: 228 DGIHISVSRGIVIDNTTVSTGDDCVSIVKNSSQISISNIICGPGHGISIGSLGKSESWEE 287
Query: 209 VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
V +TV + T+NGVR+KTW G+ S F +I MNNV NPI+IDQ YC K
Sbjct: 288 VRDITVDTAFISDTANGVRIKTWQGGS-GLVSKIIFRNIKMNNVSNPIIIDQYYCDSRK 345
>gi|449512834|ref|XP_004164154.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 604
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 137/297 (46%), Gaps = 60/297 (20%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGP 80
+ +V+NV DFGA +G DD+KAF+ +W+EA + K T+LVP G+ Y + F GP
Sbjct: 232 GSTKVVNVDDFGAKGNG-QDDTKAFELAWKEACS--SRKATLLVPKGRTYYLKPIIFSGP 288
Query: 81 CKASISFQLQGL------------------LDLFSIDTSLSLAKGTFHGQGETAWPLNQC 122
C++ ++ ++ G+ L +D + G +G G W N C
Sbjct: 289 CRSPLTLKINGMIKASTRISDYENDGRRHWLKFHEVDNFVVEGNGIINGNGRKWWQ-NSC 347
Query: 123 HKNSDC---QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS- 178
N + PT + F + ++ + D++ H+ C +K +L++ A +S
Sbjct: 348 KVNRGLPCKRAPTAVTFYQCINLVVSNLMFKDAQQMHLTFQKCTKVKALNLRVVAPGNSP 407
Query: 179 --------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKD 206
S+++ ++ CGPG GIS+GSLG +
Sbjct: 408 NTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGISIGSLGADNSE 467
Query: 207 EEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
EV + V + TSNGVR+KTW G A N F+++VM NV NPI+IDQ YC
Sbjct: 468 AEVSNIRVNRALISGTSNGVRIKTWQGGS-GYAKNIMFQNVVMRNVSNPIIIDQNYC 523
>gi|114841591|dbj|BAF32097.1| pollen allergen [Cryptomeria japonica]
gi|114841607|dbj|BAF32105.1| pollen allergen [Cryptomeria japonica]
Length = 514
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 141/299 (47%), Gaps = 61/299 (20%)
Query: 21 DATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG--KYLVSFAEFE 78
DA N + NV+ +GAV DG D ++AF T+W+ A +L+ PG K++V+ F
Sbjct: 54 DAIN-IFNVEKYGAVGDGKHDCTEAFSTAWQAACK---KPSAMLLVPGNKKFVVNNLFFN 109
Query: 79 GPCKASISFQLQGLLDLFSIDTSLS----------------LAKGTFHGQGETAWP---- 118
GPC+ +F++ G++ + S + KG GQG+ W
Sbjct: 110 GPCQPHFTFKVDGIIAAYQNPASWKNNRIWLQFAKLTGFTLMGKGVIDGQGKQWWAGQCK 169
Query: 119 -LNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD 177
+N +D PT I+F+F I G+K ++S FH+ C +K+ + ITA D
Sbjct: 170 WVNGREICNDRDRPTAIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPRD 229
Query: 178 S---------------------------------SKDILVSEVFCGPGQGISVGSLGKGI 204
S S +I++ ++ CGPG GIS+GSLG+
Sbjct: 230 SPNTDGIDIFASKNFHLQKNTIGTGDDCVAIGTGSSNIVIEDLICGPGHGISIGSLGREN 289
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
EV + V F T NG+R+KTW G+AS+ +E++ M N ENPI+I+Q YC
Sbjct: 290 SRAEVSYVHVNGAKFIDTQNGLRIKTWQGGS-GMASHIIYENVEMINSENPILINQFYC 347
>gi|388511385|gb|AFK43754.1| unknown [Medicago truncatula]
Length = 400
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 136/298 (45%), Gaps = 62/298 (20%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS- 84
NV D+GAV +G D+++AF +W++ T+L+P GK +++ F+GPC +S
Sbjct: 30 FNVLDYGAVGNGKNDETRAFVDAWKDTCIAMHESSTLLIPKGKTFMLQPVWFQGPCNSSN 89
Query: 85 ISFQLQG---------------------LLDLFSIDTSLSLAKGTFHGQGETAWPLNQCH 123
I +L+G + I + G G+G W CH
Sbjct: 90 IYVKLEGTIIAPKNIEAWKWPNDNYKGSWIRFIEISGLIVYGGGIIDGKGAQWW---DCH 146
Query: 124 KNSDCQL--PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--- 178
N C+ PT + F+ + + + ++S HI++ C+ ++ L I A +S
Sbjct: 147 SNIKCEKENPTALHFHACENLILRELTHINSPRNHISLNACHGSHISKLHIIAPNESPNT 206
Query: 179 ------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEE 208
S I ++ +FCGPG GISVGSLG+ E
Sbjct: 207 DGIDIAESSNIIIENSKIETGDDCIAINHGSNSIYINGIFCGPGHGISVGSLGRNGVHES 266
Query: 209 VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYN 266
V VRNCTF T+NG R+KTW + G A TFEDI++ +NP++IDQ Y PY+
Sbjct: 267 VENTYVRNCTFNRTTNGARIKTWIGGN-GYARKVTFEDIILIEADNPVIIDQEYNPYD 323
>gi|210063109|gb|ACJ06505.1| polygalacturonase [Diospyros kaki]
Length = 441
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 144/299 (48%), Gaps = 57/299 (19%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPC 81
A+ + +++ DFGA DG +DD++AF +W+ A + + T+LVP KYLV F GPC
Sbjct: 69 ASVKTVSIDDFGAKGDG-SDDTQAFKNAWQAARS-SSVAATLLVPKKKYLVKPIRFAGPC 126
Query: 82 KASISFQLQGLLD----------------LFSIDTSLSL-AKGTFHGQGETAWPLNQCHK 124
KA+++ Q+ G ++ LF +L + GT G G T W N C
Sbjct: 127 KAALTVQIYGTIEASANRADYKEDGTHWLLFDSVQNLKVQGGGTIDGNGNTWWE-NSCKI 185
Query: 125 NSD--CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA------- 174
N C+ PT + F + + +K ++ H++ N++ + L +T+
Sbjct: 186 NKALPCKDAPTALTFYNCKNIIVKNLKIQHAQQIHLSFEKSTNVQASSLTVTSPQTSPNT 245
Query: 175 ---HADSSKDILVS-----------------------EVFCGPGQGISVGSLGKGIKDEE 208
H ++++I +S ++ CGPG GIS+GSLG G
Sbjct: 246 DGIHITNTQNIQISSCVIGTGDDCISIVSGSQKVKATDITCGPGHGISIGSLGSGNSKAF 305
Query: 209 VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
V + V T NGVR+KTW GIASN F ++ MNNV+NPI+IDQ YC +K
Sbjct: 306 VSDVLVNGAKLYGTQNGVRIKTWQGGS-GIASNIKFLNVQMNNVDNPIIIDQNYCDQDK 363
>gi|350535050|ref|NP_001233917.1| abscission polygalacturonase precursor [Solanum lycopersicum]
gi|1575707|gb|AAB09576.1| abscission polygalacturonase [Solanum lycopersicum]
Length = 387
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 143/299 (47%), Gaps = 64/299 (21%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDT------SWREAWNWDGIKGTVLVPPGKYLVSFA 75
ATN + NV++FGA ++G D +KAF + + E ++ VP G YL+
Sbjct: 17 ATNTIYNVQNFGAQSNGKIDSTKAFLSCMGFCMCFYERLHY-------YVPRGNYLIRNI 69
Query: 76 EFEGP-CKA-SISFQLQGLL----DLFSID-----------TSLSLAKGTFHGQGETAWP 118
F G CK+ +I+ + G L D +ID +S+ G F GQG + W
Sbjct: 70 YFNGQTCKSNAIAIHIDGTLLAPSDYNAIDNDGSWIKFEKVNRVSIYGGIFDGQGASLWA 129
Query: 119 LNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA---- 174
KN + T + F N+ ++G+ +S+ FHI + GC+N + +K+ +
Sbjct: 130 CKNSKKNCP-KGTTALAFYNSNNIVMSGVTVQNSQMFHILVDGCHNAMIQGVKVLSPGNS 188
Query: 175 ------HADSS-----------------------KDILVSEVFCGPGQGISVGSLGKGIK 205
H SS ++ + + CGPG GIS+GSLG +
Sbjct: 189 PNTDGIHVQSSSGVSIMNSNIGTGDDCISIGPGNSNLWIEGIACGPGHGISIGSLGWESQ 248
Query: 206 DEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
++ V +TV+ +FT T NGVRVKTW G N F+ IVM+NV+NPI+IDQ YCP
Sbjct: 249 EQGVQNVTVKMVSFTSTENGVRVKTWARPSNGFVRNVLFQHIVMSNVQNPIIIDQNYCP 307
>gi|215736963|dbj|BAG95892.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 418
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 133/302 (44%), Gaps = 53/302 (17%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKAS- 84
V NV+ + A DG TD S+A ++W A TV VP G++ VS + F GPC
Sbjct: 46 VYNVESYDARPDGRTDASRALASAWSAACRSP-EPATVYVPDGEFFVSHSAFAGPCSGGR 104
Query: 85 ISFQLQGLLD----------------LFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDC 128
++ Q+ G L +F L+++ GT G+GE+ W
Sbjct: 105 MTVQIDGTLVAPSGYTGSASSGGEWIVFDHVDGLTVSGGTLDGRGESLWACKAAGHGGCP 164
Query: 129 QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADS 178
T ++ D I+G+KSV+S +H+ I GC + + D +I A H S
Sbjct: 165 DGATSMKVLNSRDVVISGVKSVNSELYHVVIDGCEGVAVQDARIVAPGSSPNTDGIHVQS 224
Query: 179 S-----------------------KDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVR 215
S ++ V V CGPG GIS+GSLGK ++ V +TV
Sbjct: 225 SSAVTITGASIQTGDDCISVGPGTSNLRVEHVSCGPGHGISIGSLGKESEEGGVENVTVS 284
Query: 216 NCTFTCTSNGVRVKTWPDSHIGIA--SNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPK 273
F T NG+R+KTW + A FE +M +V NPI+IDQ YCP + P
Sbjct: 285 GAAFVGTENGLRIKTWGRAARSGAYVRGVVFEHALMRDVSNPIIIDQSYCPNDGGQGCPH 344
Query: 274 DS 275
S
Sbjct: 345 QS 346
>gi|210063113|gb|ACJ06507.1| polygalacturonase [Diospyros kaki]
Length = 441
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 144/299 (48%), Gaps = 57/299 (19%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPC 81
A+ + +++ DFGA DG +DD++AF +W+ A + + T+LVP KYLV F GPC
Sbjct: 69 ASVKTVSIDDFGAKGDG-SDDTQAFKNAWQAARS-SSVAATLLVPKKKYLVKPIRFAGPC 126
Query: 82 KASISFQLQGLLD----------------LFSIDTSLSL-AKGTFHGQGETAWPLNQCHK 124
KA+++ Q+ G ++ LF +L + GT G G T W N C
Sbjct: 127 KAALTVQIYGTIEASANRADYKEDGTHWLLFDSVQNLKVQGGGTIDGNGNTWWE-NSCKI 185
Query: 125 NSD--CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA------- 174
N C+ PT + F + + +K ++ H++ N++ + L +T+
Sbjct: 186 NKALPCKDAPTALTFYNCKNIIVKNLKIQHAQQIHLSFEKSTNVQASSLTVTSPQTSPNT 245
Query: 175 ---HADSSKDILVS-----------------------EVFCGPGQGISVGSLGKGIKDEE 208
H ++++I +S ++ CGPG GIS+GSLG G
Sbjct: 246 DGIHITNTQNIQISSCVIGTGDDCISIVSGSQKVKATDITCGPGHGISIGSLGSGNSKAF 305
Query: 209 VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
V + V T NGVR+KTW GIASN F ++ MNNV+NPI+IDQ YC +K
Sbjct: 306 VSDVLVNGAKLYGTQNGVRIKTWQGGS-GIASNIKFLNVQMNNVDNPIIIDQNYCDQDK 363
>gi|114841617|dbj|BAF32110.1| pollen allergen [Cryptomeria japonica]
Length = 514
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 140/298 (46%), Gaps = 59/298 (19%)
Query: 21 DATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP-PGKYLVSFAEFEG 79
DA N + NV+ +GAV DG D ++AF T+W+ A +LVP K++V+ F G
Sbjct: 54 DAIN-IFNVEKYGAVGDGKHDCTEAFSTAWQAACK--NPSAMLLVPGSKKFVVNNLFFNG 110
Query: 80 PCKASISFQLQGLLDLFSIDTSLS----------------LAKGTFHGQGETAWP----- 118
PC+ +F++ G++ + S + KG GQG+ W
Sbjct: 111 PCQPQFTFKVDGIIAAYQNPASWKNNRIWLQFAKLTGFTLMGKGVIDGQGKQWWAGQCKW 170
Query: 119 LNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS 178
+N +D PT I+F+F I G+K ++S FH+ C +K+ + ITA DS
Sbjct: 171 VNGREICNDRDRPTAIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPRDS 230
Query: 179 ---------------------------------SKDILVSEVFCGPGQGISVGSLGKGIK 205
S +I++ ++ CGPG GIS+GSLG+
Sbjct: 231 PNTDGIDIFASKNFHLQKNTIGTGDDCVAIGTGSSNIVIEDLICGPGHGISIGSLGRENS 290
Query: 206 DEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
EV + V F T NG+R+KTW G+AS+ +E++ M N ENPI+I+Q YC
Sbjct: 291 RAEVSYVHVNGAKFIDTQNGLRIKTWQGGS-GMASHIIYENVEMINSENPILINQFYC 347
>gi|15294256|gb|AAK95305.1|AF410319_1 At1g48100/F21D18_17 [Arabidopsis thaliana]
Length = 475
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 135/304 (44%), Gaps = 64/304 (21%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
V +V FGAV DG DD+ AF +W+ A + G VL P G + ++ F GPCK
Sbjct: 79 VFDVTSFGAVGDGSCDDTAAFQDAWKAACAVE--SGVVLAPEGGVFRITSTIFSGPCKPG 136
Query: 85 ISFQLQGLLD-------------------LFSIDTSLSLAKGTFHGQGETAWPLN-QCHK 124
+ FQL G+L + +D KGT G G+ W L + H+
Sbjct: 137 LVFQLDGVLMPPDGPEEWPEKDNKNQWLVFYRLDGFTFSGKGTVEGNGQKWWDLPCKPHR 196
Query: 125 NSD-------CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA--- 174
D C PT IRF N+ + G++ +S FH+ GC + +N+++I++
Sbjct: 197 GPDGSSSSGPCASPTMIRFFMSNNIEVKGLRIQNSPQFHMKFDGCQGVLINEIQISSPKL 256
Query: 175 -------HADSSK-----------------------DILVSEVFCGPGQGISVGSLGKGI 204
H +++ D+ + V CGP GIS+GSLG
Sbjct: 257 SPNTDGIHLGNTRSVGIYNSVVSNGDDCISIGTGCSDVDIQGVTCGPSHGISIGSLGVHN 316
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
V +TVRN + NG+RVKTW G SN FE+I M NV N I++DQ YC
Sbjct: 317 SQACVSNITVRNTVIRDSDNGLRVKTW-QGGTGSVSNLLFENIQMENVLNCIIVDQYYCQ 375
Query: 265 YNKC 268
C
Sbjct: 376 SKDC 379
>gi|255576408|ref|XP_002529096.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223531447|gb|EEF33280.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 388
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 135/287 (47%), Gaps = 50/287 (17%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASISF 87
NV FGA DG D ++ F A T+ VP G+YL+ EF GPCK I+
Sbjct: 26 NVLKFGAKPDGKKDSTQPF-LKAWAAACSSATASTIYVPKGRYLIKAVEFRGPCKNRITV 84
Query: 88 QLQGLL---------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPT 132
++ G + LF +S+ GT +G W K+ +
Sbjct: 85 KIDGTIVAPSDYRALGNSGYWILFIQVNKISVLGGTLDAKGAAFWACRASGKSCPVGARS 144
Query: 133 PIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADSS--- 179
+ FN+ N+ I+G+ S++S+ H+ I C N+++ ++K+ A H +S
Sbjct: 145 -VTFNWANNVLISGLTSINSQLTHLVINSCNNVEVRNVKLVAPDQSPNTDGIHVQTSTGV 203
Query: 180 --------------------KDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTF 219
+++ +S + CGPG G+S+GSLG+ ++ V +T+ + F
Sbjct: 204 TITGSTLQTGDDCISIGPGTRNLHMSRIKCGPGHGVSIGSLGRQFSEDGVQNITLTDALF 263
Query: 220 TCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYN 266
T + NGVR+KTW N F++I+M NV+NPI+IDQ YCP N
Sbjct: 264 TGSDNGVRIKTWARPSTSFVRNILFQNIIMRNVKNPIIIDQDYCPDN 310
>gi|114841613|dbj|BAF32108.1| pollen allergen [Cryptomeria japonica]
gi|114841659|dbj|BAF32131.1| pollen allergen [Cryptomeria japonica]
gi|114841661|dbj|BAF32132.1| pollen allergen [Cryptomeria japonica]
gi|114841665|dbj|BAF32134.1| pollen allergen [Cryptomeria japonica]
Length = 514
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 140/298 (46%), Gaps = 59/298 (19%)
Query: 21 DATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP-PGKYLVSFAEFEG 79
DA N + NV+ +GAV DG D ++AF T+W+ A +LVP K++V+ F G
Sbjct: 54 DAIN-IFNVEKYGAVGDGKHDCTEAFSTAWQAACK--NPSAMLLVPGSKKFVVNNLFFNG 110
Query: 80 PCKASISFQLQGLLDLFSIDTSLS----------------LAKGTFHGQGETAWP----- 118
PC+ +F++ G++ + S + KG GQG+ W
Sbjct: 111 PCQPHFTFKVDGIIAAYQNPASWKNNRIWLQFAKLTGFTLMGKGVIDGQGKQWWAGQCKW 170
Query: 119 LNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS 178
+N +D PT I+F+F I G+K ++S FH+ C +K+ + ITA DS
Sbjct: 171 VNGREICNDRDRPTAIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPRDS 230
Query: 179 ---------------------------------SKDILVSEVFCGPGQGISVGSLGKGIK 205
S +I++ ++ CGPG GIS+GSLG+
Sbjct: 231 PNTDGIDIFASKNFHLQKNTIGTGDDCVAIGTGSSNIVIEDLICGPGHGISIGSLGRENS 290
Query: 206 DEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
EV + V F T NG+R+KTW G+AS+ +E++ M N ENPI+I+Q YC
Sbjct: 291 RAEVSYVHVNGAKFIDTQNGLRIKTWQGGS-GMASHIIYENVEMINSENPILINQFYC 347
>gi|114841629|dbj|BAF32116.1| pollen allergen [Cryptomeria japonica]
Length = 514
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 140/298 (46%), Gaps = 59/298 (19%)
Query: 21 DATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP-PGKYLVSFAEFEG 79
DA N + NV+ +GAV DG D ++AF T+W+ A +LVP K++V+ F G
Sbjct: 54 DAIN-IFNVEKYGAVGDGKHDCTEAFSTAWQAACK--NPSAMLLVPGSKKFVVNNLFFNG 110
Query: 80 PCKASISFQLQGLLDLFSIDTSLS----------------LAKGTFHGQGETAWP----- 118
PC+ +F++ G++ + S + KG GQG+ W
Sbjct: 111 PCQPHFTFKVDGIIAAYQNPASWKNNRIWLQFAKLTGFTLMGKGVIDGQGKQWWAGQCKW 170
Query: 119 LNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS 178
+N +D PT I+F+F I G+K ++S FH+ C +K+ + ITA DS
Sbjct: 171 VNGREICNDRDRPTAIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPRDS 230
Query: 179 ---------------------------------SKDILVSEVFCGPGQGISVGSLGKGIK 205
S +I++ ++ CGPG GIS+GSLG+
Sbjct: 231 PNTDGIDIFASKNFHLQKNTIGTGDDCVAIGTGSSNIVIEDLICGPGHGISIGSLGRENS 290
Query: 206 DEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
EV + V F T NG+R+KTW G+AS+ +E++ M N ENPI+I+Q YC
Sbjct: 291 RAEVSYVHVNGAKFIDTQNGLRIKTWQGGS-GMASHIIYENVEMINSENPILINQFYC 347
>gi|12313687|dbj|BAB21092.1| polygalacturonase precursor-like [Oryza sativa Japonica Group]
gi|125571226|gb|EAZ12741.1| hypothetical protein OsJ_02658 [Oryza sativa Japonica Group]
Length = 400
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 133/302 (44%), Gaps = 53/302 (17%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKAS- 84
V NV+ + A DG TD S+A ++W A TV VP G++ VS + F GPC
Sbjct: 28 VYNVESYDARPDGRTDASRALASAWSAACRSP-EPATVYVPDGEFFVSHSAFAGPCSGGR 86
Query: 85 ISFQLQGLLD----------------LFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDC 128
++ Q+ G L +F L+++ GT G+GE+ W
Sbjct: 87 MTVQIDGTLVAPSGYTGSASSGGEWIVFDHVDGLTVSGGTLDGRGESLWACKAAGHGGCP 146
Query: 129 QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADS 178
T ++ D I+G+KSV+S +H+ I GC + + D +I A H S
Sbjct: 147 DGATSMKVLNSRDVVISGVKSVNSELYHVVIDGCEGVAVQDARIVAPGSSPNTDGIHVQS 206
Query: 179 S-----------------------KDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVR 215
S ++ V V CGPG GIS+GSLGK ++ V +TV
Sbjct: 207 SSAVTITGASIQTGDDCISVGPGTSNLRVEHVSCGPGHGISIGSLGKESEEGGVENVTVS 266
Query: 216 NCTFTCTSNGVRVKTWPDSHIGIA--SNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPK 273
F T NG+R+KTW + A FE +M +V NPI+IDQ YCP + P
Sbjct: 267 GAAFVGTENGLRIKTWGRAARSGAYVRGVVFEHALMRDVSNPIIIDQSYCPNDGGQGCPH 326
Query: 274 DS 275
S
Sbjct: 327 QS 328
>gi|302805520|ref|XP_002984511.1| hypothetical protein SELMODRAFT_44337 [Selaginella moellendorffii]
gi|300147899|gb|EFJ14561.1| hypothetical protein SELMODRAFT_44337 [Selaginella moellendorffii]
Length = 388
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 142/297 (47%), Gaps = 59/297 (19%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGT-VLVPPGK-YLVSFAEFEGPCKA 83
V +V DFGA+ +GI +D+++F ++W+ A K + +LVP GK YLV +GPC+
Sbjct: 7 VFSVDDFGAIGNGIANDTQSFISTWQRACRQRKNKSSMMLVPSGKVYLVYPVTLKGPCQN 66
Query: 84 SISFQLQG---------LLDLFSIDTSLSLAK---------GTFHGQGETAWPLNQCHKN 125
+ + Q+ G L F I T + + + GT G+G+ W + C +N
Sbjct: 67 NFTLQIDGSVIAPDNRNLWKGFDIQTWILIKRVTNFRLVGTGTIDGKGQNWW-MQSCKRN 125
Query: 126 SD--C-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---- 178
+ C + PT + F + G+ +S+ H+++ C N L L +++ DS
Sbjct: 126 VNEPCRRAPTALTFRHCQHVEVDGLTITNSQQMHLDLSSCSNAVLRHLTVSSPEDSPNTD 185
Query: 179 -----------------------------SKDILVSEVFCGPGQGISVGSLGKGIKD-EE 208
+ +++ +V CGPG GIS+GSLGK + +
Sbjct: 186 GIHLERSESVSIVQTTISTGDDCISIGPGTSHVVIEDVSCGPGHGISIGSLGKKRQSFDR 245
Query: 209 VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPY 265
V + VRN T NG+R+KTW G A +F FE I M V+NPI+IDQ YC +
Sbjct: 246 VSHVKVRNAFLRDTQNGLRIKTWEGGR-GWAHDFVFEHITMLRVKNPILIDQYYCDH 301
>gi|210063111|gb|ACJ06506.1| polygalacturonase [Diospyros kaki]
Length = 441
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 144/299 (48%), Gaps = 57/299 (19%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPC 81
A+ + +++ DFGA DG +DD++AF +W+ A + + T+LVP KYLV F GPC
Sbjct: 69 ASVKTVSIDDFGAKGDG-SDDTQAFKNAWQAACS-SSVAATLLVPKKKYLVKPIRFAGPC 126
Query: 82 KASISFQLQGLLD----------------LFSIDTSLSL-AKGTFHGQGETAWPLNQCHK 124
KA+++ Q+ G ++ LF +L + GT G G T W N C
Sbjct: 127 KAALTVQIYGTIEASANRADYKEDGTHWLLFDSVQNLKVQGGGTIDGNGNTWWE-NSCKI 185
Query: 125 NSD--CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA------- 174
N C+ PT + F + + +K ++ H++ N++ + L +T+
Sbjct: 186 NKALPCKDAPTALTFYNCKNIIVKNLKIQHAQQIHLSFEKSTNVQASSLTVTSPQTSPNT 245
Query: 175 ---HADSSKDILVS-----------------------EVFCGPGQGISVGSLGKGIKDEE 208
H ++++I +S ++ CGPG GIS+GSLG G
Sbjct: 246 DGIHITNTQNIQISSCVIGTGDDCISIVSGSQKVKATDITCGPGHGISIGSLGSGNSKAF 305
Query: 209 VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
V + V T NGVR+KTW GIASN F ++ MNNV+NPI+IDQ YC +K
Sbjct: 306 VSDVLVNGAKLYGTQNGVRIKTWQGGS-GIASNIKFLNVQMNNVDNPIIIDQNYCDQDK 363
>gi|222635715|gb|EEE65847.1| hypothetical protein OsJ_21621 [Oryza sativa Japonica Group]
Length = 286
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 117/228 (51%), Gaps = 37/228 (16%)
Query: 105 AKGTFHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCY 163
KG GQG W N C K DC+ LP + +F+N+ I+GI V+ ++FH+N+
Sbjct: 10 GKGKLDGQGAAVWSKNSCAKKYDCKILPNTLVLDFVNNGLISGISLVNPKFFHMNVFKSK 69
Query: 164 NLKLNDLKITAHADS---------------------------------SKDILVSEVFCG 190
N+ + D+ ITA DS ++ + +S V CG
Sbjct: 70 NITIKDVTITAPGDSPNTDGIHMGDSSKISIIDTVIGTGDDCISIGPGTEGVNISGVTCG 129
Query: 191 PGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPD-SHIGIASNFTFEDIVM 249
PG GISVGSLG+ +++V +TV+NC ++NGVR+K++ D + + AS FT+E+I M
Sbjct: 130 PGHGISVGSLGRYKDEKDVTDVTVKNCVLKKSTNGVRIKSYEDAASVLTASKFTYENIKM 189
Query: 250 NNVENPIVIDQLYCPYNKCNIKPKDSMPNIEIGNRNLVYNGVNVKVEG 297
+V NPI+ID YCP C + +I +N+ G + K EG
Sbjct: 190 EDVANPIIIDMKYCPNKICTANGNSKVTIKDITFKNIT--GTSSKPEG 235
>gi|125526903|gb|EAY75017.1| hypothetical protein OsI_02915 [Oryza sativa Indica Group]
Length = 400
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 133/302 (44%), Gaps = 53/302 (17%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKAS- 84
V NV+ + A DG TD S+A ++W A TV VP G++ VS + F GPC
Sbjct: 28 VYNVESYDARPDGRTDASRALASAWSAACRSP-EPATVYVPDGEFFVSHSAFAGPCSGGR 86
Query: 85 ISFQLQGLLD----------------LFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDC 128
++ Q+ G L +F L+++ GT G+GE+ W
Sbjct: 87 MTVQIDGTLVAPFGYTGSASSGGEWIVFDHVDGLTVSGGTLDGRGESLWACKAAGHGGCP 146
Query: 129 QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADS 178
T ++ D I+G+KSV+S +H+ I GC + + D +I A H S
Sbjct: 147 DGATSMKVLNSRDVVISGVKSVNSELYHVVIDGCEGVAVQDARIVAPGSSPNTDGIHVQS 206
Query: 179 S-----------------------KDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVR 215
S ++ V V CGPG GIS+GSLGK ++ V +TV
Sbjct: 207 SSAVTITGASIQTGDDCISVGPGTSNLRVEHVSCGPGHGISIGSLGKESEEGGVENVTVS 266
Query: 216 NCTFTCTSNGVRVKTWPDSHIGIA--SNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPK 273
F T NG+R+KTW + A FE +M +V NPI+IDQ YCP + P
Sbjct: 267 GAAFVGTENGLRIKTWGRAARSGAYVRGVVFEHALMRDVSNPIIIDQSYCPNDGGQGCPH 326
Query: 274 DS 275
S
Sbjct: 327 QS 328
>gi|24898906|dbj|BAC23083.1| allergen Cry j 2 [Cryptomeria japonica]
gi|114841647|dbj|BAF32125.1| pollen allergen [Cryptomeria japonica]
Length = 514
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 140/298 (46%), Gaps = 59/298 (19%)
Query: 21 DATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP-PGKYLVSFAEFEG 79
DA N + NV+ +GAV DG D ++AF T+W+ A +LVP K++V+ F G
Sbjct: 54 DAIN-IFNVEKYGAVGDGKHDCTEAFSTAWQAACK--NPSAMLLVPGSKKFVVNNLFFNG 110
Query: 80 PCKASISFQLQGLLDLFSIDTSLS----------------LAKGTFHGQGETAWP----- 118
PC+ +F++ G++ + S + KG GQG+ W
Sbjct: 111 PCQPHFTFKVDGIIAAYQNPASWKNNRIWLQFAKLTGFTLMGKGVIDGQGKQWWAGQCKW 170
Query: 119 LNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS 178
+N +D PT I+F+F I G+K ++S FH+ C +K+ + ITA DS
Sbjct: 171 VNGREICNDRDRPTAIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPRDS 230
Query: 179 ---------------------------------SKDILVSEVFCGPGQGISVGSLGKGIK 205
S +I++ ++ CGPG GIS+GSLG+
Sbjct: 231 PNTDGIDIFASKNFHLQKNTIGTGDDCVAIGTGSSNIVIEDLICGPGHGISIGSLGRENS 290
Query: 206 DEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
EV + V F T NG+R+KTW G+AS+ +E++ M N ENPI+I+Q YC
Sbjct: 291 RAEVSYVHVNGAKFIDTQNGLRIKTWQGGS-GMASHIIYENVEMINSENPILINQFYC 347
>gi|506858|dbj|BAA06172.1| allergen [Cryptomeria japonica]
gi|114841577|dbj|BAF32090.1| pollen allergen [Cryptomeria japonica]
gi|114841581|dbj|BAF32092.1| pollen allergen [Cryptomeria japonica]
gi|114841583|dbj|BAF32093.1| pollen allergen [Cryptomeria japonica]
gi|114841585|dbj|BAF32094.1| pollen allergen [Cryptomeria japonica]
gi|114841587|dbj|BAF32095.1| pollen allergen [Cryptomeria japonica]
gi|114841593|dbj|BAF32098.1| pollen allergen [Cryptomeria japonica]
gi|114841599|dbj|BAF32101.1| pollen allergen [Cryptomeria japonica]
gi|114841609|dbj|BAF32106.1| pollen allergen [Cryptomeria japonica]
gi|114841611|dbj|BAF32107.1| pollen allergen [Cryptomeria japonica]
gi|114841615|dbj|BAF32109.1| pollen allergen [Cryptomeria japonica]
gi|114841621|dbj|BAF32112.1| pollen allergen [Cryptomeria japonica]
gi|114841623|dbj|BAF32113.1| pollen allergen [Cryptomeria japonica]
gi|114841627|dbj|BAF32115.1| pollen allergen [Cryptomeria japonica]
gi|114841633|dbj|BAF32118.1| pollen allergen [Cryptomeria japonica]
gi|114841643|dbj|BAF32123.1| pollen allergen [Cryptomeria japonica]
gi|114841645|dbj|BAF32124.1| pollen allergen [Cryptomeria japonica]
gi|114841649|dbj|BAF32126.1| pollen allergen [Cryptomeria japonica]
gi|114841655|dbj|BAF32129.1| pollen allergen [Cryptomeria japonica]
gi|114841667|dbj|BAF32135.1| pollen allergen [Cryptomeria japonica]
gi|114841669|dbj|BAF32136.1| pollen allergen [Cryptomeria japonica]
gi|114841671|dbj|BAF32137.1| pollen allergen [Cryptomeria japonica]
Length = 514
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 140/298 (46%), Gaps = 59/298 (19%)
Query: 21 DATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP-PGKYLVSFAEFEG 79
DA N + NV+ +GAV DG D ++AF T+W+ A +LVP K++V+ F G
Sbjct: 54 DAIN-IFNVEKYGAVGDGKHDCTEAFSTAWQAACK--NPSAMLLVPGSKKFVVNNLFFNG 110
Query: 80 PCKASISFQLQGLLDLFSIDTSLS----------------LAKGTFHGQGETAWP----- 118
PC+ +F++ G++ + S + KG GQG+ W
Sbjct: 111 PCQPHFTFKVDGIIAAYQNPASWKNNRIWLQFAKLTGFTLMGKGVIDGQGKQWWAGQCKW 170
Query: 119 LNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS 178
+N +D PT I+F+F I G+K ++S FH+ C +K+ + ITA DS
Sbjct: 171 VNGREICNDRDRPTAIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPRDS 230
Query: 179 ---------------------------------SKDILVSEVFCGPGQGISVGSLGKGIK 205
S +I++ ++ CGPG GIS+GSLG+
Sbjct: 231 PNTDGIDIFASKNFHLQKNTIGTGDDCVAIGTGSSNIVIEDLICGPGHGISIGSLGRENS 290
Query: 206 DEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
EV + V F T NG+R+KTW G+AS+ +E++ M N ENPI+I+Q YC
Sbjct: 291 RAEVSYVHVNGAKFIDTQNGLRIKTWQGGS-GMASHIIYENVEMINSENPILINQFYC 347
>gi|198246564|gb|ACH82233.1| ripening-induced polygalacturonase [Carica papaya]
gi|198246566|gb|ACH82234.1| ripening-induced polygalacturonase [Carica papaya]
Length = 397
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 132/291 (45%), Gaps = 56/291 (19%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFA-EFEGPCKAS-I 85
NV +GA G TD +AF ++W+ A T+ VP GK+L++ F+G C+ S +
Sbjct: 33 NVVAYGAKPGGTTDSRQAFLSAWKNACA-SARPATLYVPRGKFLLAGRIVFDGECRNSKM 91
Query: 86 SFQLQGLLD---------------LFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQL 130
++ G L LF LS+ G G+G W C K
Sbjct: 92 VVRIDGTLVAPADYRVLKDGGYWVLFQNVNGLSVYGGVLDGRGSGLW---DCKKAGHSCP 148
Query: 131 PTPIRFNFLNDSTIT--GIKSVDSRYFHINILGCYNLKLNDLKITA----------HADS 178
FLN I G+ S++S+ FHI I GC N+KL K++A H
Sbjct: 149 FGATSIGFLNSRNIVIDGLTSLNSQVFHIVIYGCNNVKLQGTKVSASGVSPNTDGIHVQM 208
Query: 179 SKDIL-----------------------VSEVFCGPGQGISVGSLGKGIKDEEVVGLTVR 215
S + + + CGPG GISVGSLGK + V +TV+
Sbjct: 209 SSHVTILSSTIATGDDCVSIGPGTSTLWIENMACGPGHGISVGSLGKYSNEPGVQNVTVK 268
Query: 216 NCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYN 266
+ +FT T NG R+K+W G A N F+ + MNNV+NPIVIDQ YCP N
Sbjct: 269 SVSFTGTQNGARIKSWGRPSNGFAKNIIFQHVTMNNVQNPIVIDQNYCPGN 319
>gi|388519421|gb|AFK47772.1| unknown [Medicago truncatula]
Length = 425
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 150/326 (46%), Gaps = 59/326 (18%)
Query: 16 SVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSF 74
S R + AT+ NV DFGA DG +DD+KAF+ +W A + T++VP G +LV
Sbjct: 34 SWRKLKATSSTFNVLDFGAKGDGHSDDTKAFEDAWAAACKMEA--STMVVPSGSVFLVKP 91
Query: 75 AEFEGP-CKASISFQLQG-----------------LLDLFSIDTSLSLAKGTFHGQGETA 116
F GP C+ +I FQL G L+ ++ KG GQG
Sbjct: 92 ISFSGPNCEPNIVFQLDGKIIAPTSPSAWGSGTLQWLEFTKLNKITIKGKGVIDGQGSVW 151
Query: 117 WPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 176
W N K + PT +RF + +++GI +S+ H+ C N+++ D+ ++
Sbjct: 152 W--NDSEKLPKTK-PTALRFYGSDGVSVSGITIQNSQQTHLKFDSCTNVQVFDITTSSPG 208
Query: 177 DS----------SKD-----------------------ILVSEVFCGPGQGISVGSLGKG 203
DS S+D ILV V CGPG GIS+GSLGK
Sbjct: 209 DSPNTDGIHLQNSQDVVISGSTLSCGDDCVSIQTGCSNILVHNVNCGPGHGISIGSLGKE 268
Query: 204 IKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
V +TVR+ T T GVR+KTW G N F +I +++V+ PI+IDQ YC
Sbjct: 269 NTKACVSNVTVRDVTLQNTLTGVRIKTWQGGS-GSVQNIMFSNIQVSDVKTPIMIDQFYC 327
Query: 264 PYNKC-NIKPKDSMPNIEIGNRNLVY 288
KC N+ ++ +I N + Y
Sbjct: 328 DGGKCRNVTSAVAVSSIHYTNVHGTY 353
>gi|114841579|dbj|BAF32091.1| pollen allergen [Cryptomeria japonica]
gi|114841603|dbj|BAF32103.1| pollen allergen [Cryptomeria japonica]
gi|114841619|dbj|BAF32111.1| pollen allergen [Cryptomeria japonica]
gi|114841651|dbj|BAF32127.1| pollen allergen [Cryptomeria japonica]
gi|114841657|dbj|BAF32130.1| pollen allergen [Cryptomeria japonica]
Length = 514
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 141/299 (47%), Gaps = 61/299 (20%)
Query: 21 DATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG--KYLVSFAEFE 78
DA N + NV+ +GAV DG D ++AF T+W+ A +L+ PG K++V+ F
Sbjct: 54 DAIN-IFNVEKYGAVGDGKHDCTEAFSTAWQAACK---KPSAMLLVPGNKKFVVNNLFFN 109
Query: 79 GPCKASISFQLQGLLDLFSIDTSLS----------------LAKGTFHGQGETAWP---- 118
GPC+ +F++ G++ + S + KG GQG+ W
Sbjct: 110 GPCQPHFTFKVDGIIAAYQNPASWKNNRIWLQFAKLTGFTLMGKGVIDGQGKQWWAGQCK 169
Query: 119 -LNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD 177
+N +D PT I+F+F I G++ ++S FH+ C +K+ + ITA D
Sbjct: 170 WVNGREICNDRDRPTAIKFDFSTGLIIQGLRLMNSPEFHLVFGNCEGVKIIGISITAPRD 229
Query: 178 S---------------------------------SKDILVSEVFCGPGQGISVGSLGKGI 204
S S +I++ ++ CGPG GIS+GSLG+
Sbjct: 230 SPNTDGIDIFASKNFHLQKNTIGTGDDCVAIGTGSSNIVIEDLICGPGHGISIGSLGREN 289
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
EV + V F T NG+R+KTW G+AS+ +E++ M N ENPI+I+Q YC
Sbjct: 290 SRAEVSYVHVNGAKFIDTQNGLRIKTWQGGS-GMASHIIYENVEMINSENPILINQFYC 347
>gi|297812965|ref|XP_002874366.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297320203|gb|EFH50625.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 409
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 104/310 (33%), Positives = 141/310 (45%), Gaps = 71/310 (22%)
Query: 6 RFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLV 65
R S+L++FI G+ + NV FGA DG TDDS AF +W + T+L+
Sbjct: 29 RISILINFI--YFGL-VNGQNYNVLKFGAKGDGETDDSNAFIQAWNATCGGEDNINTLLI 85
Query: 66 PPGK-YLVSFAEFEGPCKA-SISFQLQGLLDL---------------FSIDTSLSL---A 105
P GK YL+ EF+GPCK+ SI QL G++ S + SL
Sbjct: 86 PSGKTYLLQPIEFKGPCKSTSIKIQLDGIIVAPSNIKTWSNPKSQMWISFSSVFSLMIDG 145
Query: 106 KGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGC--- 162
G G+G + W +K ++ TI GI S+DS HI+I GC
Sbjct: 146 SGKIDGRGSSFWEALHIYK--------------CDNLTINGITSIDSPKTHISIKGCNYA 191
Query: 163 ------------------------YNLKLNDLKITAHAD------SSKDILVSEVFCGPG 192
N+K++D I D S I ++++ CGPG
Sbjct: 192 TISKINILAPEKSPNTDGIDISYSTNIKISDSTIQTGDDCIAIDNGSSGINITQINCGPG 251
Query: 193 QGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNV 252
GISVGSLG + EV + V +CTF T NG R+KTW G A N +FE+I + N
Sbjct: 252 HGISVGSLGADGTNAEVSDVHVTHCTFNETMNGARIKTWQGGQ-GYARNISFENITLINT 310
Query: 253 ENPIVIDQLY 262
NPI+IDQ Y
Sbjct: 311 RNPIIIDQQY 320
>gi|359487296|ref|XP_003633562.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Vitis
vinifera]
Length = 481
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 145/322 (45%), Gaps = 68/322 (21%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPP--GKYLVSFAEFEGPCKA- 83
+NV DFGA DG+TDD++AF T+W E + + VLV P KY V F GPCK+
Sbjct: 107 VNVDDFGAKGDGVTDDTEAFKTAWEETCSSNT---AVLVVPQNKKYHVKPITFSGPCKSD 163
Query: 84 SISFQLQGLLD-----------------LFSIDTSLSLAKGTFHGQGETAWPLNQCHKN- 125
S+ ++ G + ++I +GT G G+ W N C N
Sbjct: 164 SVKLKILGTIKASEDPSDYAKDRSRWLLFYNIKNFQVEGQGTIDGNGKIWWK-NSCKINI 222
Query: 126 -SDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----- 178
C PT + F ++ + G+ D++ H++ N++ +++ +T+ +S
Sbjct: 223 TQPCTNAPTAVSFVQCDNLKVYGLNVQDAQQMHVSFEESMNVQASNIMVTSSEESPNTDG 282
Query: 179 ----------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVV 210
S +I +V CGPG GIS+GSLGKG + V
Sbjct: 283 IHVTRSENVQIIKTVIKTGDDCISIVNGSTNIEAIDVTCGPGHGISIGSLGKGKSEARVS 342
Query: 211 GLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK-CN 269
+ V T+NGVR+KTW G A N F+DI M NV NPI+IDQ YC CN
Sbjct: 343 NVMVNTAKLIGTTNGVRIKTWQGGS-GYAENIVFQDIKMENVSNPIIIDQNYCDQETPCN 401
Query: 270 IKPKDSMPNIEIGNRNLVYNGV 291
+ N + RN+VY +
Sbjct: 402 EQ------NSAVQIRNIVYKNI 417
>gi|15221078|ref|NP_175244.1| polygalacturonase [Arabidopsis thaliana]
gi|75306312|sp|Q949Z1.1|PGLR4_ARATH RecName: Full=Polygalacturonase At1g48100; Short=PG; AltName:
Full=Pectinase At1g48100; Flags: Precursor
gi|15292729|gb|AAK92733.1| putative polygalacturonase PG1 [Arabidopsis thaliana]
gi|20465275|gb|AAM20001.1| putative polygalacturonase PG1 [Arabidopsis thaliana]
gi|332194127|gb|AEE32248.1| polygalacturonase [Arabidopsis thaliana]
Length = 475
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 135/304 (44%), Gaps = 64/304 (21%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
V +V FGAV DG DD+ AF +W+ A + G VL P G + ++ F GPCK
Sbjct: 79 VFDVTSFGAVGDGSCDDTAAFQDAWKAACAVE--SGVVLAPEGGVFKITSTIFSGPCKPG 136
Query: 85 ISFQLQGLLD-------------------LFSIDTSLSLAKGTFHGQGETAWPLN-QCHK 124
+ FQL G+L + +D KGT G G+ W L + H+
Sbjct: 137 LVFQLDGVLMPPDGPEEWPEKDNKNQWLVFYRLDGFTFSGKGTVEGNGQKWWDLPCKPHR 196
Query: 125 NSD-------CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA--- 174
D C PT IRF N+ + G++ +S FH+ GC + +N+++I++
Sbjct: 197 GPDGSSSSGPCASPTMIRFFMSNNIEVKGLRIQNSPQFHMKFDGCQGVLINEIQISSPKL 256
Query: 175 -------HADSSK-----------------------DILVSEVFCGPGQGISVGSLGKGI 204
H +++ D+ + V CGP GIS+GSLG
Sbjct: 257 SPNTDGIHLGNTRSVGIYNSVVSNGDDCISIGTGCSDVDIQGVTCGPSHGISIGSLGVHN 316
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
V +TVRN + NG+RVKTW G SN FE+I M NV N I++DQ YC
Sbjct: 317 SQACVSNITVRNTVIRDSDNGLRVKTW-QGGTGSVSNLLFENIQMENVLNCIIVDQYYCQ 375
Query: 265 YNKC 268
C
Sbjct: 376 SKDC 379
>gi|357495809|ref|XP_003618193.1| Polygalacturonase [Medicago truncatula]
gi|355493208|gb|AES74411.1| Polygalacturonase [Medicago truncatula]
Length = 425
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 150/326 (46%), Gaps = 59/326 (18%)
Query: 16 SVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSF 74
S R + AT+ NV DFGA DG +DD+KAF+ +W A + T++VP G +LV
Sbjct: 34 SWRKLKATSSTFNVLDFGAKGDGHSDDTKAFEDAWAAACKMEA--STMVVPSGSVFLVKP 91
Query: 75 AEFEGP-CKASISFQLQG-----------------LLDLFSIDTSLSLAKGTFHGQGETA 116
F GP C+ +I FQL G L+ ++ KG GQG
Sbjct: 92 ISFSGPNCEPNIVFQLDGKIIAPTSPSAWGSGTLQWLEFTKLNKITIKGKGVIDGQGSVW 151
Query: 117 WPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 176
W N K + PT +RF + +++GI +S+ H+ C N+++ D+ ++
Sbjct: 152 W--NDSEKLPKTK-PTALRFYGSDGVSVSGITIQNSQQTHLKFDSCTNVQVFDITTSSPG 208
Query: 177 DS----------SKD-----------------------ILVSEVFCGPGQGISVGSLGKG 203
DS S+D ILV V CGPG GIS+GSLGK
Sbjct: 209 DSPNTDGIHLQNSQDVVISGSTLSCGDDCVSIQTGCSNILVHNVNCGPGHGISIGSLGKE 268
Query: 204 IKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
V +TVR+ T T GVR+KTW G N F +I +++V+ PI+IDQ YC
Sbjct: 269 NTKACVSNVTVRDVTLQNTLTGVRIKTWQGGS-GSVQNIMFSNIQVSDVKTPIMIDQFYC 327
Query: 264 PYNKC-NIKPKDSMPNIEIGNRNLVY 288
KC N+ ++ +I N + Y
Sbjct: 328 DGGKCRNVTSAVAVSSIHYTNVHGTY 353
>gi|224109162|ref|XP_002315106.1| predicted protein [Populus trichocarpa]
gi|222864146|gb|EEF01277.1| predicted protein [Populus trichocarpa]
Length = 397
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 169/385 (43%), Gaps = 73/385 (18%)
Query: 1 LLLAARFSLLVSFITSVRGID--ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDG 58
L+L L F+ S+ I+ + + NV+ +GA +G TD ++AF +W A
Sbjct: 4 LMLCLHSILFFIFLVSLNNINISSAETIYNVQTYGAKPNGKTDSTQAFLDAWAAACGSTD 63
Query: 59 IKGTVLVPPGKYLVSFAEFEGP-CKA-SISFQLQGLLDL---------------FSIDTS 101
+ +P G+YL+ F G CK+ I+ ++ G L F +
Sbjct: 64 -PTIIYIPEGRYLLGSVAFTGGNCKSPDITVRIDGTLIAPEDYRILGLASNWLSFESVSG 122
Query: 102 LSLAKGTFHGQGETAWPLNQCHKNSDCQL-PTPIRFNFLNDSTITGIKSVDSRYFHINIL 160
+S+ G +G W K S+C T + F N+ I G+ S++S+ FHI I
Sbjct: 123 VSIVGGALDAKGSPLWDCKS--KGSNCPAGATTLSFVNSNNIKINGLLSLNSQMFHIVIN 180
Query: 161 GCYNLKLNDLKITAHADS---------------------------------SKDILVSEV 187
GC N+++ +++ A DS +K++ + V
Sbjct: 181 GCQNVQVQGVRVIAAGDSPNTDGIHVQLSTDVVIMNSSIKTGDDCISIGPGTKNLWIERV 240
Query: 188 FCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDI 247
CGPG GIS+GSL K + + V +TV++ FT T+NG R+K+W G A F
Sbjct: 241 RCGPGHGISIGSLAKTMDEAGVQNVTVKSTIFTGTTNGFRIKSWARHSTGFAQAIRFIGA 300
Query: 248 VMNNVENPIVIDQLYCPYNKCNIKPKDSMPNIEIGNRNLVYNGVNVKVEGPETTSL-CS- 305
M NV+NPI+IDQ YCP+ N+ + + I+I +++Y G+ P CS
Sbjct: 301 TMINVQNPIIIDQNYCPH---NLNCPNEVSGIQI--SDVIYQGIRGTSATPVAIKFDCSF 355
Query: 306 ----------NVKPTLFGKQIPATC 320
NV T K+ +TC
Sbjct: 356 KYPCKGITLQNVNLTYLNKEAQSTC 380
>gi|356536665|ref|XP_003536857.1| PREDICTED: polygalacturonase At1g48100-like [Glycine max]
Length = 475
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 136/312 (43%), Gaps = 62/312 (19%)
Query: 21 DATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEG 79
+A+N + +V+ FGA+ DGITDD+++F +W A + +LVP G +++ F G
Sbjct: 73 NASNSLFDVRTFGAIGDGITDDTESFKMAWDTACQSESPVKVILVPQGFSFVIQSTIFTG 132
Query: 80 PCKASISFQLQGLLD-------------------LFSIDTSLSLAKGTFHGQGETAWPLN 120
PCK + ++ G L F I+ G G+G W L
Sbjct: 133 PCKGGLVLKVDGTLMPPDGPESWPKNNSKRQWLVFFRINGMSLEGSGLIDGRGAKWWDLP 192
Query: 121 -QCHKNSD-------CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKI 172
+ HK + C P IRF ++ T+ G++ +S FH GC ++ + + I
Sbjct: 193 CKPHKGPNGTTSPGPCDSPVAIRFFMSSNLTVQGLRIKNSPQFHFRFDGCESVHVESIYI 252
Query: 173 TAHADSS---------------------------------KDILVSEVFCGPGQGISVGS 199
TA A S D+ + + CGPG GIS+GS
Sbjct: 253 TAPALSPNTDGIHIENTNDVRIYNSVISNGDDCVSIGAGCHDVDIKNITCGPGHGISIGS 312
Query: 200 LGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVID 259
LG V +TVR+ + NGVR+KTW G S TF +I M +V NPI++D
Sbjct: 313 LGNHNSRACVSNITVRDSVIKVSDNGVRIKTW-QGGAGSVSGVTFSNIHMESVRNPIIVD 371
Query: 260 QLYCPYNKCNIK 271
Q YC C+ K
Sbjct: 372 QFYCLSKDCSNK 383
>gi|24898908|dbj|BAC23084.1| allergen Cry j 2 [Cryptomeria japonica]
Length = 514
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 141/299 (47%), Gaps = 61/299 (20%)
Query: 21 DATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG--KYLVSFAEFE 78
DA N + NV+ +GAV DG D ++AF T+W+ A +L+ PG K++V+ F
Sbjct: 54 DAIN-IFNVEKYGAVGDGKHDCTEAFSTAWQAACK---KPSAMLLVPGNKKFVVNNLFFN 109
Query: 79 GPCKASISFQLQGLLDLFSIDTSLS----------------LAKGTFHGQGETAWP---- 118
GPC+ +F++ G++ + S + KG GQG+ W
Sbjct: 110 GPCQPHFTFKVDGIIAAYQNPASWKNNRIWLQFAKLTGFTLMGKGVIDGQGKQWWAGQCK 169
Query: 119 -LNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD 177
+N +D PT I+F+F I G++ ++S FH+ C +K+ + ITA D
Sbjct: 170 WVNGREICNDRDRPTAIKFDFSTGLIIQGLRLMNSPEFHLVFGNCEGVKIIGISITAPRD 229
Query: 178 S---------------------------------SKDILVSEVFCGPGQGISVGSLGKGI 204
S S +I++ ++ CGPG GIS+GSLG+
Sbjct: 230 SPNTDGIDIFASKNFHLQKNTIGTGDDCVAIGTGSSNIVIEDLICGPGHGISIGSLGREN 289
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
EV + V F T NG+R+KTW G+AS+ +E++ M N ENPI+I+Q YC
Sbjct: 290 SRAEVSYVHVNGAKFIDTQNGLRIKTWQGGS-GMASHIIYENVEMINSENPILINQFYC 347
>gi|222635662|gb|EEE65794.1| hypothetical protein OsJ_21499 [Oryza sativa Japonica Group]
Length = 425
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 156/354 (44%), Gaps = 79/354 (22%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCK-- 82
+ +V ++GA I D+ AF +WR A T+L+P G + VS EF GPCK
Sbjct: 22 HIYDVTEYGAEPSNI-DNKDAFLAAWRAACGSAAGNATLLIPEGTFAVSTVEFSGPCKNG 80
Query: 83 -ASISFQLQGLLD------------------LFSIDTSLSLAKGTFHGQGETAWPLNQCH 123
+ ++ + G+L + L GT G+G N
Sbjct: 81 RSPLAVVVDGVLHPCAGGCHRKSGDDDVWITFSGVSNLLVTGAGTLDGRGGEHGHSNGGG 140
Query: 124 KNSDCQLPTPIRFNFL---------NDSTIT--------------GIKSVDSRYFHINIL 160
K+ + I FNFL +D T G + SR + I
Sbjct: 141 KSKTTTV-REIFFNFLVKRNGEVDDDDDEYTHMANICADPGAGQRGERDATSRRSRLRIE 199
Query: 161 GCYNLKLND---LKITAH---ADS--------------SKDILVSEVFCGPGQGISVGSL 200
+ D + +++H ADS S ++++ V CGPG GISVGSL
Sbjct: 200 APAASRNTDGIHVGLSSHVTVADSLVGTGDDCVSIGPGSSGVVIAGVACGPGHGISVGSL 259
Query: 201 GKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQ 260
G+ + +V GL VRNCT T+NG+R+KTWP S A N TF DIVM+NV NPI+IDQ
Sbjct: 260 GREEGEGDVRGLVVRNCTVVGTTNGLRIKTWPGSPPSRAFNITFRDIVMSNVSNPIIIDQ 319
Query: 261 LYCPYNKCNIKPKDSMPNIEIGNRNLVYNGVNVKVEGPETTS-----LCSNVKP 309
YCP+ C+ K S+ I ++ Y ++EG ++ LCS +P
Sbjct: 320 HYCPHAHCSDIAKPSLVQIS----DVTYE----RIEGTSSSRVAVQLLCSEDRP 365
>gi|413943677|gb|AFW76326.1| hypothetical protein ZEAMMB73_463400 [Zea mays]
Length = 424
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 158/377 (41%), Gaps = 75/377 (19%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNR----VLNVKDFGAVADGITDDSKAFDTSWREAWNW 56
L L F ++ +GIDA ++ GA +G TD +KA +W A
Sbjct: 11 LFLLVLFCIVHGEKEESKGIDAKASRPGGSFDITKLGASGNGKTDSTKAVQEAWASACGD 70
Query: 57 DGIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLL----------------DLFSIDT 100
G K T+L+P G +LV F GPCK ++ + G L ++ +D
Sbjct: 71 TG-KQTILIPKGDFLVGQLNFTGPCKGDVTIHVDGNLLATMDLSQYKEHGNWIEILRVDN 129
Query: 101 SLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINI 159
+ KG G G W N C K DC+ LP + +F+N+ ++G+ ++S++FH+
Sbjct: 130 LVITGKGNLDGLGPAVWSKNSCAKKYDCKILPNSLVMDFVNNEEVSGVTLLNSKFFHMKA 189
Query: 160 L--------------GCYNLKLNDLKITAHADS--------------------------- 178
L C ++ + D+ +TA DS
Sbjct: 190 LTSRGRVKAEAEEMYQCKDMLIKDVTVTALGDSPNTDGIHMGDSSGITITNTVISVSDDC 249
Query: 179 ------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWP 232
+ + ++ V G G GIS+GSLG+ +++ + V++CT T+ GVR+K +
Sbjct: 250 ISFSPGTSKVNITGVTYGSGHGISIGSLGRYKDEKDDTNINVKDCTLKKTTFGVRIKAYE 309
Query: 233 D-SHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNIEIGNRNLVYNGV 291
D + + S +E+I M + NPI ID YCP C ++ +++ + +
Sbjct: 310 DAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANDAS-----KVTVKDVTFKNI 364
Query: 292 NVKVEGPETTSLCSNVK 308
PE SL + K
Sbjct: 365 TGTSSTPEAVSLLCSAK 381
>gi|297820550|ref|XP_002878158.1| endo-polygalacturonase 1 [Arabidopsis lyrata subsp. lyrata]
gi|297323996|gb|EFH54417.1| endo-polygalacturonase 1 [Arabidopsis lyrata subsp. lyrata]
Length = 431
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 156/313 (49%), Gaps = 61/313 (19%)
Query: 14 ITSVRGIDAT---NRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK- 69
+ S++ D T + ++V +FGA DG TDD++AF +W++A + +G+ T L+P GK
Sbjct: 52 VLSLKSSDETTLESSTVSVSNFGAKGDGKTDDTQAFKKAWKKACSTNGVT-TFLIPKGKT 110
Query: 70 YLVSFAEFEGPCKASISFQLQGLLDLFSIDT---------------SLSL---AKGTFHG 111
YL+ F GPCK+ +FQ+ G L + + +LS+ + G +G
Sbjct: 111 YLLKSTRFRGPCKSLRNFQILGTLSASTKRSDYKDKNHWLILEDVNNLSIDGGSTGIING 170
Query: 112 QGETAWPLNQCH--KNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLN 168
G+ W N C K+ C + PT + L + + ++ +++ I+I C ++++
Sbjct: 171 NGKIWWQ-NSCKIDKSKPCTKAPTALTLYNLKNLNVKNLRVRNAQQIQISIEKCNKVEVS 229
Query: 169 DLKITAHADS----------SKDILVS-----------------------EVFCGPGQGI 195
++ ITA DS +++I VS ++ CGPG GI
Sbjct: 230 NVVITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDGTQNLQIFDLTCGPGHGI 289
Query: 196 SVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENP 255
S+GSLG V G+ V F+ + NGVR+KT+ G A N F++I M NV+NP
Sbjct: 290 SIGSLGDDNSKAYVSGINVDGAKFSESDNGVRIKTYQGGS-GTAKNIKFQNIRMENVKNP 348
Query: 256 IVIDQLYCPYNKC 268
I+IDQ YC +KC
Sbjct: 349 IIIDQNYCDKDKC 361
>gi|297834448|ref|XP_002885106.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297330946|gb|EFH61365.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 454
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 139/288 (48%), Gaps = 60/288 (20%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGPCK-A 83
L+V GA+ DG+TDDS+AF +W + G G ++VP G +++ +F+G CK A
Sbjct: 23 ALDVTQLGAIGDGVTDDSQAFLKAWEAVCSGTG-DGQLVVPAGVTFMLQPLKFQGSCKSA 81
Query: 84 SISFQLQGLLD---------------LFS-IDTSLSLAKGTFHGQGETAWPLNQCHKNSD 127
I Q+ G L LF+ I+ + G +GQG + W HK S
Sbjct: 82 PIFVQILGNLVASSKGNWKGDKDQWILFTDIEGLVIEGGGEINGQGSSWWE----HKGSR 137
Query: 128 CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--------- 178
PT ++F N+ ++G+ VDS HI+I C + ++ L+I A S
Sbjct: 138 ---PTALKFKSCNNLRLSGLTHVDSPMAHIHINDCNYVTISSLRINAPESSPNTDGIDVG 194
Query: 179 ------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTV 214
+ +I +S + CGPG GIS+GSLGK + V + V
Sbjct: 195 SSSNVVIQDCVIGTGDDCIAINSGTSNIRISGIDCGPGHGISIGSLGKDGETATVENVCV 254
Query: 215 RNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLY 262
+NC F T+NG R+KTW G A TF I ++NVENPI+IDQLY
Sbjct: 255 QNCNFRGTTNGARIKTWQGGS-GYARMITFNGITLDNVENPIIIDQLY 301
>gi|414873518|tpg|DAA52075.1| TPA: hypothetical protein ZEAMMB73_445912 [Zea mays]
Length = 436
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 164/375 (43%), Gaps = 81/375 (21%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
V +V +GA DG DD++A + +W+ A VLVP G+ YL+ GPCK+S
Sbjct: 61 VYSVDRYGARGDGRNDDTRALEMAWKAACA-SPRPAVVLVPDGRRYLLKLLTLRGPCKSS 119
Query: 85 ISFQLQGLLD------------------LFSIDTSLSLAKGTFHGQGETAWPLN-QCHKN 125
++ ++G L SID G G GE WP + + +K
Sbjct: 120 VTLTVKGTLVASPNRADWSDNDRRHWIVFRSIDKLTVNGGGAIDGNGEKWWPHSCKINKA 179
Query: 126 SDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA---------- 174
C + PT + F++ D + +K V+S+ H+++ N L L ITA
Sbjct: 180 LPCKEAPTALSFHYCVDLKVEDLKIVNSQQIHMSVEDSANALLARLSITAPGTSPNTDGI 239
Query: 175 HADSSKDILV-----------------------SEVFCGPGQGISVGSLGKGIKDEEVVG 211
H SKD+ V S+V CGPG GIS+GSLG EV G
Sbjct: 240 HITRSKDVRVTDCKIKTGDDCMSIENGTHNLHVSKVNCGPGHGISIGSLGDDNSRAEVSG 299
Query: 212 LTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK-C-- 268
+T+ + T+NG R+KT+ G A + TF+++VM +V+NPI+IDQ YC K C
Sbjct: 300 ITIDSVQLHGTTNGARIKTYQGGS-GYAKDITFQNMVMYDVKNPIIIDQNYCDKAKPCGE 358
Query: 269 -------------NIKPKDSMPNIEIGN-------RNLVYNGVNVKVEGPE--TTSLCSN 306
NI+ S + N + + +++K++ + T S C N
Sbjct: 359 QESAVQVSGVVFKNIRGTTSTKDAIKMNCSENVPCQGITLQNIDLKMQDGKGNTRSTCQN 418
Query: 307 VKPTLFGKQIPATCV 321
K T FG P C
Sbjct: 419 AKWTEFGTVRPQPCT 433
>gi|10176984|dbj|BAB10216.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 411
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 152/327 (46%), Gaps = 49/327 (14%)
Query: 24 NRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCK 82
N + NV ++GA+ DG +DDSKAF +W + N+ G + + +P G +L+ EF GPCK
Sbjct: 33 NNIFNVLNYGAIGDGFSDDSKAFKDAWEDTCNYIGSESIMEIPEGNTFLLQPIEFHGPCK 92
Query: 83 AS-ISFQLQGLLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSD-----CQLPTPIRF 136
+ I + G L K H E A +N + + + P +
Sbjct: 93 SKKIILSISGNLIAPESPYEWKCNKDDCHQWIEFA-HINGLYIDGHGLMACLKRPRGVVI 151
Query: 137 NFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------------ 178
+ ++ I+ I DS F +++ + + L ITA DS
Sbjct: 152 SHSSNVHISNIMVKDSPNFQMSLEDSKWVIVKQLTITADGDSPNTDGIHIQRSQNVIVYD 211
Query: 179 ---------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTS 223
SK I +S + CGPG GIS+GSLG+ E V + VR+CTF T+
Sbjct: 212 SNIRTGDDCISIGDGSKYINISRISCGPGHGISIGSLGRYGTKETVENVVVRDCTFRETT 271
Query: 224 NGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNIEIGN 283
NGVR+KTW G N FE I ++ PI+IDQ YCP+++C K+ +EI
Sbjct: 272 NGVRIKTWQGGR-GHVRNVLFERIKLHGATRPIIIDQFYCPHSQC----KNHTKAVEI-- 324
Query: 284 RNLVYNGVN-VKVEGPETTSLCSNVKP 309
+N+++N ++ ++ P LCS P
Sbjct: 325 KNVMFNHIHGTSIKKPFVQLLCSKSVP 351
>gi|302782539|ref|XP_002973043.1| hypothetical protein SELMODRAFT_54363 [Selaginella moellendorffii]
gi|300159644|gb|EFJ26264.1| hypothetical protein SELMODRAFT_54363 [Selaginella moellendorffii]
Length = 392
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 142/297 (47%), Gaps = 59/297 (19%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGT-VLVPPGK-YLVSFAEFEGPCKA 83
V +V DFGA+ +GI +D+++F ++W+ A K + +LVP G+ YLV +GPC+
Sbjct: 11 VFSVDDFGAIGNGIANDTQSFISTWQRACRQRKNKSSMMLVPSGQVYLVYPVTLKGPCQN 70
Query: 84 SISFQLQG---------LLDLFSIDTSLSLAK---------GTFHGQGETAWPLNQCHKN 125
+ + Q+ G L F I T + + + GT G+G+ W + C +N
Sbjct: 71 NFTLQIDGSVIAPDNRNLWKGFDIQTWILIKRVTNFRLVGTGTIDGKGQNWW-MQSCKRN 129
Query: 126 SD--C-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---- 178
+ C + PT + F + G+ +S+ H+++ C N L L +++ DS
Sbjct: 130 VNEPCRRAPTALTFRHCQHVEVDGLTITNSQQMHLDLSSCSNAVLRHLTVSSPEDSPNTD 189
Query: 179 -----------------------------SKDILVSEVFCGPGQGISVGSLGKGIKD-EE 208
+ +++ +V CGPG GIS+GSLGK + +
Sbjct: 190 GIHLERSESVSIVQTTISTGDDCISIGPGTSHVVIEDVSCGPGHGISIGSLGKKRQSFDR 249
Query: 209 VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPY 265
V + VRN T NG+R+KTW G A +F FE I M V+NPI+IDQ YC +
Sbjct: 250 VSHVKVRNAFLRDTQNGLRIKTWEGGR-GWAHDFVFEHITMLRVKNPILIDQYYCDH 305
>gi|297847058|ref|XP_002891410.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337252|gb|EFH67669.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 474
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 138/309 (44%), Gaps = 64/309 (20%)
Query: 21 DATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEG 79
D+ + V +V FGAV DG +D+ AF +W+ A + G VL P G + ++ F G
Sbjct: 73 DSDSCVFDVTSFGAVGDGSCNDTVAFQNAWKAACAVE--SGVVLAPEGGVFKITSTIFSG 130
Query: 80 PCKASISFQLQGLLD-------------------LFSIDTSLSLAKGTFHGQGETAWPLN 120
PCK + FQL G+L + +D KGT G G+ W L
Sbjct: 131 PCKPGLVFQLDGVLMPPDGPEEWPEKDDKNQWLVFYRLDGITFSGKGTVEGNGQKWWDLP 190
Query: 121 -QCHKNSD-------CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKI 172
+ H+ D C PT IRF N+ + G++ +S FH+ GC + +N+++I
Sbjct: 191 CKPHRGPDGSSSSGPCASPTMIRFFMSNNIEVKGLRIQNSPQFHMKFDGCQGVLINEIQI 250
Query: 173 TA----------HADSSK-----------------------DILVSEVFCGPGQGISVGS 199
++ H +++ D+ + V CGP GIS+GS
Sbjct: 251 SSPKLSPNTDGIHLGNTRSVGIYNSVVSNGDDCISIGTGCSDVDIQGVTCGPSHGISIGS 310
Query: 200 LGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVID 259
LG V +TVRN + NG+RVKTW G SN FE+I M NV N I++D
Sbjct: 311 LGVHNSQACVSNITVRNTVIRDSDNGLRVKTW-QGGTGSVSNLLFENIQMENVLNCIIVD 369
Query: 260 QLYCPYNKC 268
Q YC C
Sbjct: 370 QYYCQSKDC 378
>gi|359477241|ref|XP_002270999.2| PREDICTED: exopolygalacturonase clone GBGE184-like [Vitis vinifera]
Length = 388
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 127/276 (46%), Gaps = 70/276 (25%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
+ +V +GAV DG T++ AF +W +A N G K T+LVP G + + F GP
Sbjct: 70 IFDVTMYGAVGDGKTENGMAFLAAWDDACNHPG-KSTLLVPNGTFFIGPISFIGPLTQVF 128
Query: 86 SFQLQGLLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTIT 145
+F G + W + I N N + I+
Sbjct: 129 NFI------------------------GISKWLMQSI-----------ILVNVTNGN-IS 152
Query: 146 GIKSVDSRYFHINILGCYNLKLNDLKITA------------------HADSSK------- 180
I + + FH+ I+ N+ ++ + ITA H SS
Sbjct: 153 NITLKNGKGFHMGIINSDNVTVHGVNITAPWNSPNTDGVHIGYSTNIHITSSTIGVGDDC 212
Query: 181 --------DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWP 232
+I V CGPG GISVGSLGK +++VVG+ V+NCT T NGVR+KTWP
Sbjct: 213 VSIGPGSINITVFNTKCGPGHGISVGSLGKYSAEKDVVGVRVKNCTINGTQNGVRIKTWP 272
Query: 233 DSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
S AS+F FEDIVM NV NPI+IDQ YCP++ C
Sbjct: 273 GSPASKASSFWFEDIVMINVSNPIIIDQEYCPWSTC 308
>gi|359482692|ref|XP_002266797.2| PREDICTED: probable polygalacturonase At3g15720-like [Vitis
vinifera]
Length = 389
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 134/301 (44%), Gaps = 53/301 (17%)
Query: 20 IDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFE 78
++ NV DFGA+ DG+TDDS+AF +W +++ K +L+S F
Sbjct: 11 LNGRTTTFNVLDFGAIGDGVTDDSQAFLKAWNAVCTARTTSAMLIIQRKKTFLLSPTVFS 70
Query: 79 GPCKA-SISFQLQG----------------LLDLFSIDTSLSLAKGTFHGQGETAWP-LN 120
GPCK I + G L ID + KGT GQG + WP L
Sbjct: 71 GPCKPPQIHVLVLGDITAPKTRSAWGRSSYWLIFQYIDGFIINGKGTLDGQGSSWWPSLY 130
Query: 121 QCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-- 178
+ + + F+F N+ I G+ ++S H+ + C L++L I A +S
Sbjct: 131 YKQELLNDTNSYALGFSFCNNLQIYGLNVINSPSKHVKLFRCNGAILSNLNIKAPKESPN 190
Query: 179 -------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDE 207
S +I +S V CGPG GIS+GSLG +
Sbjct: 191 TDGIVIGECSQIQVHDNNIGTGDDCVAILKGSSNINISRVACGPGHGISIGSLGMNGAYD 250
Query: 208 EVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
V + V++C+FT T NG+R+KTW G A +F+ I +N ENPI+IDQ YCP
Sbjct: 251 TVEEIHVQDCSFTGTQNGIRIKTWQGGS-GYARKISFQGITLNAAENPIIIDQYYCPQLH 309
Query: 268 C 268
C
Sbjct: 310 C 310
>gi|114841653|dbj|BAF32128.1| pollen allergen [Cryptomeria japonica]
Length = 514
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 139/298 (46%), Gaps = 59/298 (19%)
Query: 21 DATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP-PGKYLVSFAEFEG 79
DA N + NV+ +GAV DG D ++AF T+W+ A +LVP K++V+ F G
Sbjct: 54 DAIN-IFNVEKYGAVGDGKHDCTEAFSTAWQAACK--NPSAMLLVPGSKKFVVNNLFFNG 110
Query: 80 PCKASISFQLQGLLDLFSIDTSLS----------------LAKGTFHGQGETAWP----- 118
PC+ +F++ G++ + S + KG GQG+ W
Sbjct: 111 PCQPHFTFKVDGIIAAYQNPASWKNNRIWLQFAKLTGFTLMGKGVIDGQGKQWWAGQCKW 170
Query: 119 LNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS 178
+N +D PT I+F+F I G+K ++S FH+ C +K+ + ITA DS
Sbjct: 171 VNGREICNDRDRPTAIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPRDS 230
Query: 179 ---------------------------------SKDILVSEVFCGPGQGISVGSLGKGIK 205
S +I++ ++ CGPG GIS+GSLG
Sbjct: 231 PNTDGIDIFASKNFHLQKNTIGTGDDCVAIGTGSSNIVIEDLICGPGHGISIGSLGTENS 290
Query: 206 DEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
EV + V F T NG+R+KTW G+AS+ +E++ M N ENPI+I+Q YC
Sbjct: 291 RAEVSYVHVNGAKFIDTQNGLRIKTWQGGS-GMASHIIYENVEMINSENPILINQFYC 347
>gi|297736265|emb|CBI24903.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 145/322 (45%), Gaps = 68/322 (21%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPP--GKYLVSFAEFEGPCKA- 83
+NV DFGA DG+TDD++AF T+W E + + VLV P KY V F GPCK+
Sbjct: 88 VNVDDFGAKGDGVTDDTEAFKTAWEETCSSNT---AVLVVPQNKKYHVKPITFSGPCKSD 144
Query: 84 SISFQLQGLLD-----------------LFSIDTSLSLAKGTFHGQGETAWPLNQCHKN- 125
S+ ++ G + ++I +GT G G+ W N C N
Sbjct: 145 SVKLKILGTIKASEDPSDYAKDRSRWLLFYNIKNFQVEGQGTIDGNGKIWWK-NSCKINI 203
Query: 126 -SDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----- 178
C PT + F ++ + G+ D++ H++ N++ +++ +T+ +S
Sbjct: 204 TQPCTNAPTAVSFVQCDNLKVYGLNVQDAQQMHVSFEESMNVQASNIMVTSSEESPNTDG 263
Query: 179 ----------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVV 210
S +I +V CGPG GIS+GSLGKG + V
Sbjct: 264 IHVTRSENVQIIKTVIKTGDDCISIVNGSTNIEAIDVTCGPGHGISIGSLGKGKSEARVS 323
Query: 211 GLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK-CN 269
+ V T+NGVR+KTW G A N F+DI M NV NPI+IDQ YC CN
Sbjct: 324 NVMVNTAKLIGTTNGVRIKTWQGGS-GYAENIVFQDIKMENVSNPIIIDQNYCDQETPCN 382
Query: 270 IKPKDSMPNIEIGNRNLVYNGV 291
+ N + RN+VY +
Sbjct: 383 EQ------NSAVQIRNIVYKNI 398
>gi|414873520|tpg|DAA52077.1| TPA: hypothetical protein ZEAMMB73_569322 [Zea mays]
Length = 441
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 141/304 (46%), Gaps = 56/304 (18%)
Query: 18 RGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAE 76
R + + V ++ +GA DG DD++A + +W+ A VLVP G+ YL+
Sbjct: 56 RSLPESQSVFSLDRYGARGDGRNDDTRALEMAWKAACA-SPRPAVVLVPAGRRYLLKLLT 114
Query: 77 FEGPCKASISFQLQGLLD------------------LFSIDTSLSLAKGTFHGQGETAWP 118
GPCK+S++ ++G L SID G G GE WP
Sbjct: 115 LRGPCKSSVTLTVKGTLVASPNRADWSDSDRRHWIVFRSIDELTVNGGGAIDGNGEKWWP 174
Query: 119 LN-QCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA-- 174
+ + +K C + PT + F++ + +K ++S+ H+++ N+ L L ITA
Sbjct: 175 HSCKINKALPCKEAPTALSFHYCVGLKVEDLKIMNSQQIHMSVEDSANVLLARLSITAPG 234
Query: 175 --------HADSSKDILV-----------------------SEVFCGPGQGISVGSLGKG 203
H SKD+ V S+V CGPG GIS+GSLG
Sbjct: 235 TSPNTDGIHITRSKDVRVTDCKIKTGDDCMSIENGTHNLHVSKVTCGPGHGISIGSLGDD 294
Query: 204 IKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
EV G+T+ + T+NG R+KT+ G A + TF+++VM +V+NPI+IDQ YC
Sbjct: 295 NSRAEVSGITIDSVQLHGTTNGARIKTYQGGS-GYAKDITFQNMVMYDVKNPIIIDQNYC 353
Query: 264 PYNK 267
K
Sbjct: 354 DRAK 357
>gi|356532405|ref|XP_003534763.1| PREDICTED: polygalacturonase-like, partial [Glycine max]
Length = 389
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 137/295 (46%), Gaps = 58/295 (19%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFA-EFEGPCK-ASI 85
NV DFGA DG TD + AF +W +A + G + VP G++L+ A F G C +I
Sbjct: 20 NVVDFGAKPDGTTDATSAFLGAWNKACSSPKPAG-IHVPQGRFLIGRAVTFSGQCSNRAI 78
Query: 86 SFQLQGLL-------------DLFSID--TSLSLAKGTFHGQGETAWPLNQCHKNSDCQL 130
S ++G L F+ D T LS+ G +G W C +
Sbjct: 79 SITIRGTLLAPSQYTFLGNSLYWFTFDQVTGLSIHGGVLDARGSFLW---DCKYKAMPNC 135
Query: 131 P---TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSS-------- 179
P +RF ITG+ S +S+ HI I C+N+K++ +K+ A +S
Sbjct: 136 PIGAATLRFTNSEHIVITGLTSENSQKVHILINACHNVKMHGVKLMADGNSPNTDGIHVQ 195
Query: 180 -------------------------KDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTV 214
+++ + +V CGPG GIS+GSLG + + V +TV
Sbjct: 196 FSTDVTILAPRIQTGDDCISVGPGCRNLWIEDVACGPGHGISIGSLGWDLDEPGVKNVTV 255
Query: 215 RNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPY-NKC 268
R TF+ T NG R+K+W G + FE MN+V+NPI+IDQ YCP+ N C
Sbjct: 256 RKATFSKTQNGFRIKSWGRPSRGFVQDVHFEHATMNDVQNPIIIDQHYCPFRNGC 310
>gi|224101497|ref|XP_002312305.1| predicted protein [Populus trichocarpa]
gi|222852125|gb|EEE89672.1| predicted protein [Populus trichocarpa]
Length = 482
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 132/304 (43%), Gaps = 64/304 (21%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
+ NV D+GAV DG TDD+ AF +W+EA + G +L P G ++++ F GPCK
Sbjct: 87 IFNVMDYGAVGDGSTDDTDAFRQAWKEACGVE--SGVILAPSGHSFMITSTIFTGPCKPG 144
Query: 85 ISFQLQGLLD-------------------LFSIDTSLSLAKGTFHGQGETAWPL------ 119
+ FQ+ G L + +D KGT G GE W L
Sbjct: 145 LVFQVDGYLMPPDGPDCWPEKDSTKQWLVFYRLDGMTLTGKGTIEGNGEKWWDLPCKPHR 204
Query: 120 --NQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA--- 174
N C P IRF ++ ++G++ +S FH+ GC + + L I++
Sbjct: 205 SPNGSTSKGPCDSPALIRFFMSSNLAVSGLRIQNSPQFHMKFDGCEGVLIEKLSISSPKL 264
Query: 175 -------HADSSK-----------------------DILVSEVFCGPGQGISVGSLGKGI 204
H +++K ++ + + CGP GIS+GSLG
Sbjct: 265 SPNTDGIHIENTKAVGIYDSSISNGDDCISIGTGCSNVDIDGLTCGPSHGISIGSLGVHH 324
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
V +TVRN + NG+R+KTW G S+ FE+I M NV N + IDQ YC
Sbjct: 325 SQACVRNITVRNSVIKESDNGLRIKTW-QGGTGCVSDINFENIQMENVRNCMNIDQYYCL 383
Query: 265 YNKC 268
C
Sbjct: 384 SKAC 387
>gi|15241591|ref|NP_199297.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|2660666|gb|AAC79137.1| putative polygalacturonase [Arabidopsis thaliana]
gi|10177474|dbj|BAB10865.1| polygalacturonase [Arabidopsis thaliana]
gi|332007784|gb|AED95167.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 381
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 140/314 (44%), Gaps = 68/314 (21%)
Query: 11 VSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK- 69
V +T + I ++ +V +FGA +GITDDSKAF +W G T ++P K
Sbjct: 8 VFLLTLLHSILVNGQIYDVLEFGADGNGITDDSKAFVKAWSAMCGSGGNSKTFIIPSNKT 67
Query: 70 YLVSFAEFEGPCKA-SISFQLQG---------------LLDLFSIDTSLSL---AKGTFH 110
+L+ F+GPCK+ S+ + G L S + L GT H
Sbjct: 68 FLLQPLTFQGPCKSPSVQVKFDGKIVAPINKAAWSDYKLFRWVSFKEIIGLTVNGSGTIH 127
Query: 111 GQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
G+G + W Q H F ND ITGI S +S HI+I C +K+ +
Sbjct: 128 GRGSSFWK--QLH------------FQRCNDLMITGITSFNSPKNHISISECKRVKITKI 173
Query: 171 KITAHADS---------------------------------SKDILVSEVFCGPGQGISV 197
K+ A DS S +I ++ + CGPG GISV
Sbjct: 174 KLVAPHDSPNTDGINISESSDVDIYDTVIGTGDDCVAINSGSMNINIARMNCGPGHGISV 233
Query: 198 GSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIV 257
GS+G+ ++ V + V NCTF T NG R+KTWP+ G A N F+ + +NPI+
Sbjct: 234 GSVGRDGEESIVENVQVTNCTFIRTDNGARIKTWPNGK-GYAKNILFKSLTFRETKNPII 292
Query: 258 IDQLYCPYNKCNIK 271
IDQ Y + +++
Sbjct: 293 IDQNYVDKGRLDVE 306
>gi|22330914|ref|NP_187454.2| Polygalacturonase QRT2 [Arabidopsis thaliana]
gi|226736750|sp|Q9SFB7.2|QRT2_ARATH RecName: Full=Polygalacturonase QRT2; Short=AtQRT2; Short=PG QRT2;
AltName: Full=Pectinase QRT2; AltName: Full=Protein
QUARTET 2; Flags: Precursor
gi|332641105|gb|AEE74626.1| Polygalacturonase QRT2 [Arabidopsis thaliana]
Length = 439
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 132/292 (45%), Gaps = 56/292 (19%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKAS 84
R NV FGA A+G DDSKAF +W A + GI V Y++ F GPCK+S
Sbjct: 69 RSFNVNTFGAKANG-NDDSKAFMKAWEAACSSTGIVYIVAPKNRDYMLKAVTFSGPCKSS 127
Query: 85 -ISFQLQGLLDLFSIDTSLSLAK----------------GTFHGQGETAWPLNQCHKNSD 127
I F++ G ++ + + + G G G WP C N
Sbjct: 128 LIIFKIYGRIEAWENPSDYKERRHWIVFENVNNLRVEGGGRIDGNGHIWWP-KSCKINPQ 186
Query: 128 CQ---LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------ 178
PT + F N+ ++ I+ +++ H+ C N+K +L +T+ ADS
Sbjct: 187 LPCLGAPTAVTFVECNNLRVSNIRLENAQQMHLTFQDCKNVKALNLMVTSPADSPNTDGI 246
Query: 179 ---------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVG 211
S+++ + + CGPG GIS+GSLG+ + V
Sbjct: 247 HVSGTQNILIQDSIVRTGDDCISIVSGSENVRATGITCGPGHGISIGSLGEDNSEAYVSN 306
Query: 212 LTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
+ V T T+NGVR+KTW H G+A N F+DI+M NV NPI+I+Q YC
Sbjct: 307 VVVNKATLIGTTNGVRIKTWQGGH-GMAKNIIFQDIIMKNVTNPIIINQDYC 357
>gi|356537284|ref|XP_003537159.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 436
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 141/299 (47%), Gaps = 59/299 (19%)
Query: 23 TNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPC 81
+ R +NV D+GA DD++AF+ +W E + GI V+VP K + + F GPC
Sbjct: 62 SQRRINVDDYGAKTIDGRDDTEAFEKAWDEVCSTGGI---VVVPEEKIFHLKPITFSGPC 118
Query: 82 KASISFQLQGLLDL----------------FSIDTSLSL-AKGTFHGQGETAWPLNQCHK 124
+ +I+F++ G + F T+L + GT +G G W N C +
Sbjct: 119 QPNIAFRVYGTIKAWPKMSAYQNDRLHWIKFENVTNLRVDGGGTINGNGRKWWE-NSCKR 177
Query: 125 NSD--CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA------- 174
N + C+ PT + F N+ +T ++ +++ HI C N+ ++L + A
Sbjct: 178 NKNLPCKPAPTAVTFYQCNNLKVTNLRFKNAQQMHIRFQKCNNVAASNLVVRAPGNSPNT 237
Query: 175 ---HADSSKDILVS-----------------------EVFCGPGQGISVGSLGKGIKDEE 208
H +K+IL+S ++ CGPG GIS+GSLG G +
Sbjct: 238 DGIHVTETKNILISNSIIGTGDDCISIVSGSQNVRAIDIKCGPGHGISIGSLGAGDSKAQ 297
Query: 209 VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
V + V T T T+NGVR+KTW G A N F +I M NV NPI++DQ YC K
Sbjct: 298 VSNVLVNRATLTRTTNGVRIKTWQGGS-GYAENIIFVNIAMRNVTNPIIVDQNYCDQEK 355
>gi|242041749|ref|XP_002468269.1| hypothetical protein SORBIDRAFT_01g042735 [Sorghum bicolor]
gi|241922123|gb|EER95267.1| hypothetical protein SORBIDRAFT_01g042735 [Sorghum bicolor]
Length = 398
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 135/295 (45%), Gaps = 58/295 (19%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKA 83
RV++V D+GA G ++AF +W EA N + LVP GK YL+ F GPC+A
Sbjct: 23 RVVDVDDYGAGDAGGDHVTEAFLEAWSEACNSSDDRSVFLVPEGKAYLLMPVIFRGPCRA 82
Query: 84 -SISFQLQGLLDLFS------------------IDTSLSLAKGTFHGQGETAWPLNQCHK 124
SI+ ++G L+ S ID L GT G G W +N C
Sbjct: 83 VSITAMIKGTLEAPSNRSVWLDQDLQEWITFEGIDRLRVLGGGTLDGNG-LQWWINSCKL 141
Query: 125 NSDCQL---PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA------- 174
N + PT + F + ++ DS H+ I +N+ ++ L ITA
Sbjct: 142 NKSMRCVIGPTALYFRRCTHLVVEELEVRDSMQMHVAIAYSWNVVVSKLLITAPGWSPNT 201
Query: 175 ---HADSSKDILVSE-----------------------VFCGPGQGISVGSLGKGIKDEE 208
H +S+++ +S+ +FCGPG GIS+GSLG
Sbjct: 202 DGIHVSNSREVSISKCTISTGDDCISIVTGSMFVRVTSIFCGPGHGISIGSLGANNSWAH 261
Query: 209 VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
V + V T T+NGVR+KTW H G A +F+DI M+NV NPI+IDQ YC
Sbjct: 262 VSDVLVEKATLLGTTNGVRIKTWQGGH-GYAERISFQDISMHNVTNPIIIDQNYC 315
>gi|52353423|gb|AAU43991.1| unknown protein [Oryza sativa Japonica Group]
gi|215700980|dbj|BAG92404.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740740|dbj|BAG97396.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 426
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 149/376 (39%), Gaps = 82/376 (21%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
+L + DFGAV DGIT+D++AF +W A + VP GK Y + GPCK
Sbjct: 34 LLTLDDFGAVGDGITNDTQAFLDAWNAACA-STEPAVLAVPAGKTYQIWPVRLAGPCKKK 92
Query: 85 ISFQLQGL------------------LDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKN- 125
+ + G L +F +D GT G G W + K
Sbjct: 93 LKLMISGTIAAPASPDEWAGRDPTKWLYVFRVDDLSVSGGGTIDGMGAEWWARSCKRKKT 152
Query: 126 ---SDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKI---------- 172
S P ++F ++ GI + FH+ C ++K + L++
Sbjct: 153 KPCSTVSAPKALQFEECRRVSVQGITMQNGPQFHLMFTRCTDVKASFLRVVAPESSPNTD 212
Query: 173 ------TAHAD-----------------SSKDILVSEVFCGPGQGISVGSLGKGIKDEEV 209
T HA + D+ V ++ CGPG GIS+GSLGK + +
Sbjct: 213 GIHLNDTTHAQIMDNLISTGDDCVSMVGNCSDVRVKDISCGPGHGISIGSLGKNRTTDRI 272
Query: 210 VGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC--PYNK 267
+ V C T T+NGVR+K+W +G A N FE IVM NV NPI+IDQ YC P
Sbjct: 273 ENVRVDTCLLTNTTNGVRIKSW-QGGMGYAHNLRFEGIVMKNVSNPIIIDQYYCDQPTPC 331
Query: 268 CNIKPKDSMPNIEIGN---------------------RNLVYNGVNVK-VEGPETTSLCS 305
N + IE R+L VN+ V G ++ C
Sbjct: 332 ANQTQAVEVRKIEFAGIRGTSATEQAIKLACSDAVPCRDLELRNVNLTMVGGGAASAFCH 391
Query: 306 NVKPTLFGKQIPATCV 321
G +PA+C+
Sbjct: 392 RASGKAAGAVVPASCL 407
>gi|224130352|ref|XP_002328587.1| predicted protein [Populus trichocarpa]
gi|222838569|gb|EEE76934.1| predicted protein [Populus trichocarpa]
Length = 445
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 146/336 (43%), Gaps = 62/336 (18%)
Query: 6 RFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLV 65
FS +V TS RG ++NV FGA+ DG++DD++AF+ +W A K LV
Sbjct: 46 EFSKVVPSWTSERG---GKVLVNVDSFGAIGDGVSDDTQAFEKAWNTACTTP--KSVFLV 100
Query: 66 PPGK-YLVSFAEFEGPCKASISFQLQGL------------------LDLFSIDTSLSLAK 106
PPG+ Y+V+ F+GPC + Q+ G L ++ L
Sbjct: 101 PPGRHYMVNATRFKGPCADRLVIQIDGTIVAPDEPKNWDPNLPRLWLYFSKLNGVLFQGN 160
Query: 107 GTFHGQGETAWPLNQCHKNSD--CQ-LPTPIRFNFLNDSTITGIKSVDSRYFH------- 156
G G G + W + C KN C+ PT + + + I G+ +S+ H
Sbjct: 161 GVIDGSG-SKWWASSCKKNKSNPCRGAPTALTIDSSSAVKINGLTIQNSQQMHFVISHSD 219
Query: 157 --------------------INILGCYNLKLNDLKITAHAD------SSKDILVSEVFCG 190
I+I G N+ L D KI D S +I + +FCG
Sbjct: 220 SVRVSDVLVSAPEDSPNTDGIHITGSTNVVLQDCKIGTGDDCVSIVNGSSNIKMKRIFCG 279
Query: 191 PGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMN 250
PG GIS+GSLGK V + + T+NG+R+KTW H G FE++ M
Sbjct: 280 PGHGISIGSLGKDNSTGMVTKVVLDTAFLRETTNGLRIKTWQGGH-GYVRGVRFENVGME 338
Query: 251 NVENPIVIDQLYCPYNKCNIKPKDSMPNIEIGNRNL 286
NV NP++IDQ YC K ++ EI RN+
Sbjct: 339 NVANPVIIDQFYCDSPKTCHNQTSAVEISEITYRNI 374
>gi|2660667|gb|AAC79138.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 381
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 140/315 (44%), Gaps = 68/315 (21%)
Query: 10 LVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK 69
+V +T + + ++ +V FGA +GITDDSK F +W G T L+P +
Sbjct: 7 VVFLLTLLHSVLVNGQIYDVLKFGAEGNGITDDSKTFVKAWSAMCGSGGNSKTFLIPSNQ 66
Query: 70 -YLVSFAEFEGPCKA-SISFQLQG---------------LLDLFSIDTSLSL---AKGTF 109
+L+ F+GPCK+ S+ + G L S + L GT
Sbjct: 67 TFLLQPLTFQGPCKSPSVQVKFDGKIVAPINKAAWSESKLFRWVSFKEIIGLTVNGSGTI 126
Query: 110 HGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLND 169
HG+G + W Q H F ND I GI S +S HI+I C ++L
Sbjct: 127 HGRGSSFWK--QLH------------FQRCNDLKIIGITSFNSPRNHISISECKRVQLTK 172
Query: 170 LKITAHADS----------SKDILVSEVF-----------------------CGPGQGIS 196
+K+ A DS S D+ V + F CGPG GIS
Sbjct: 173 IKLVAPEDSPNTDGINISGSSDVDVYDTFIGTGDDCVAINNGSVNINITRMNCGPGHGIS 232
Query: 197 VGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPI 256
VGSLG+ ++ V + V NCTF T NGVR+KTWP+ G A N F+D+ +NPI
Sbjct: 233 VGSLGRDGEESIVENVQVTNCTFFRTDNGVRIKTWPNGK-GYARNILFKDLTFRESKNPI 291
Query: 257 VIDQLYCPYNKCNIK 271
+IDQ Y + +++
Sbjct: 292 IIDQNYVDKGRLDVE 306
>gi|225441688|ref|XP_002282772.1| PREDICTED: polygalacturonase [Vitis vinifera]
gi|297739723|emb|CBI29905.3| unnamed protein product [Vitis vinifera]
Length = 442
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 148/301 (49%), Gaps = 61/301 (20%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK--YLVSFAEFEG 79
A+ + ++V D+ A DG +D ++AF +W A + +G+VLV P YL+ FEG
Sbjct: 71 ASVKTVSVNDYEAKGDG-SDATEAFKKAWEAACS---SQGSVLVVPKNKNYLLKPITFEG 126
Query: 80 PCKASISFQLQGLLDL------FSIDTSLSL-----------AKGTFHGQGETAWPLNQC 122
PCK+SI+ Q+ G + +S D + L GT +G G+T W N C
Sbjct: 127 PCKSSITVQIYGTVQASADRSAYSNDMTRWLVFENVQNLAVQGGGTINGNGKTWWE-NSC 185
Query: 123 HKNSD--CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS- 178
N D C+ PT + F + + +K +++ H++ C ++ + L +TA DS
Sbjct: 186 KVNDDLPCKDAPTALTFYNCKNLVVKNLKIQNAQQMHVSFEKCVGVQASGLTVTAPGDSP 245
Query: 179 --------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKD 206
++++ + + CGPG GIS+GSLG G +
Sbjct: 246 NTDGIHVTDTQNIQISSSVIGTGDDCISIVSGTQNLQATGITCGPGHGISIGSLGSGNSE 305
Query: 207 EEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYN 266
V +TV T + T+NGVR+KTW G ASN F++I M++V+NPI+I+Q YC +
Sbjct: 306 AHVSDITVNGATLSGTTNGVRIKTWQGGS-GSASNIKFQNIEMHDVDNPIIINQKYCDDD 364
Query: 267 K 267
K
Sbjct: 365 K 365
>gi|30688821|ref|NP_850359.1| Polygalacturonase ADPG2 [Arabidopsis thaliana]
gi|226711460|sp|Q8RY29.2|ADPG2_ARATH RecName: Full=Polygalacturonase ADPG2; Short=AtADPG2; Short=PG
ADPG2; AltName: Full=Pectinase ADPG2; AltName:
Full=Protein ARABIDOPSIS DEHISCENCE ZONE
POLYGALACTURONASE 2; Flags: Precursor
gi|330254946|gb|AEC10040.1| Polygalacturonase ADPG2 [Arabidopsis thaliana]
Length = 433
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 154/321 (47%), Gaps = 58/321 (18%)
Query: 3 LAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGT 62
L R + + VR T ++V DFGA DG TDD++AF +W++A + +G
Sbjct: 44 LIKRREDITGLRSFVRASLRTPTTVSVSDFGAKGDGKTDDTQAFVNAWKKACSSNGAV-N 102
Query: 63 VLVPPGK-YLVSFAEFEGPCKASISFQLQGLLD---------------LFSIDTSLSL-- 104
+LVP G YL+ + GPC + ++ Q+ G L +F +LS+
Sbjct: 103 LLVPKGNTYLLKSIQLTGPCNSILTVQIFGTLSASQKRSDYKDISKWIMFDGVNNLSVDG 162
Query: 105 -AKGTFHGQGETAWPLNQCHKNSD---CQLPTPIRFNFLNDSTITGIKSVDSRYFHINIL 160
G G GET W N C +N + PT + F + +K +++ I+I
Sbjct: 163 GDTGVVDGNGETWWQ-NSCKRNKAKPCTKAPTALTFYNSKSLIVKNLKVRNAQQIQISIE 221
Query: 161 GCYNLKLNDLKITAHADS---------------------------------SKDILVSEV 187
C N++++++ +TA ADS S+++ ++++
Sbjct: 222 KCSNVQVSNVVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESGSQNVQINDI 281
Query: 188 FCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDI 247
CGPG GIS+GSLG V G+TV + T NGVR+KT+ G ASN F++I
Sbjct: 282 TCGPGHGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGS-GTASNIIFQNI 340
Query: 248 VMNNVENPIVIDQLYCPYNKC 268
M+NV+NPI+IDQ YC +KC
Sbjct: 341 QMDNVKNPIIIDQDYCDKSKC 361
>gi|400758|sp|Q02096.1|PGLR_PERAE RecName: Full=Polygalacturonase; Short=PG; AltName: Full=Pectinase;
Flags: Precursor
gi|22631|emb|CAA47055.1| polygalacturonase [Persea americana]
Length = 462
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 178/402 (44%), Gaps = 107/402 (26%)
Query: 6 RFSLLVSFITSVRGIDATNRV----------LNVKDFGAVADGITDDSKAFDTSWREAWN 55
FS ++ F S+ ++ N V ++V DFGA DG TDD+KAF+ +W++A +
Sbjct: 54 EFSSIMGFEPSILSLERFNPVGGPETSPDTDISVDDFGARGDG-TDDTKAFEKAWKDACS 112
Query: 56 WDGIKGTVLVPP--GKYLVSFAEFEGPCKASISFQLQGLLDL-----------------F 96
G+VL+ P YL+ F GPCK+ + +++G ++ F
Sbjct: 113 ----SGSVLIVPENKNYLLKQITFSGPCKSDLRVKIRGTIEASSDQSDWVGHNRKRWIEF 168
Query: 97 SIDTSLSL-AKGTFHGQGETAWPLNQCHKNS-DCQ-LPTPIRFNFLNDSTITGIKSVDSR 153
++L+L GT +G GET W + K S C+ PT + F + ++ + DS+
Sbjct: 169 EDISNLTLEGGGTSNGNGETWWDSSCKRKKSLPCKSAPTALTFRSCKNLIVSDLSIKDSQ 228
Query: 154 YFHINILGCYNLKLNDLKITAHADS---------------------------------SK 180
H++ C ++ ++L +TA S SK
Sbjct: 229 KMHLSFDKCQDVIASNLMVTAPEHSPNTDGIHITGTQRIHVMNSVIGTGDDCISIESGSK 288
Query: 181 DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIAS 240
++ + + CGPG GIS+GSLG + V G+ V T+NG+R+KTW G A
Sbjct: 289 MVIATNITCGPGHGISIGSLGDRNSEAHVSGVLVDGGNLFDTTNGLRIKTWQGGS-GSAK 347
Query: 241 NFTFEDIVMNNVENPIVIDQLY------CPYNKCNIKPKD-SMPNIE------------- 280
N F++IVM+NV NPI+IDQ Y CP + +K + + NI
Sbjct: 348 NIKFQNIVMHNVTNPIIIDQYYCDSKDPCPEQESAVKVSNVAYMNIRGTSASEVAVKFDC 407
Query: 281 ----------IGNRNLVYNGVNVKVEGPETTSLCSNVKPTLF 312
+GN NLV NG G ETT CSN+ L
Sbjct: 408 SKSSPCQGYIVGNINLVGNG------GKETTMSCSNIVQGLL 443
>gi|356532486|ref|XP_003534803.1| PREDICTED: polygalacturonase At1g48100-like [Glycine max]
Length = 474
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 134/304 (44%), Gaps = 64/304 (21%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
+ +V+ FGAV DG DD+ AF +W+EA + G VLVP + ++ F GPCK
Sbjct: 77 IFDVRSFGAVGDGSADDTDAFVAAWKEACAVE--SGVVLVPEDHCFKITSTIFTGPCKPG 134
Query: 85 ISFQLQGLLD-------------------LFSIDTSLSLAKGTFHGQGETAWPLN-QCHK 124
+ FQ+ G L + +D KGT G GE W L + H+
Sbjct: 135 LVFQVDGTLMAPDGPESWPKEDSHSQWLVFYRLDQMTLTGKGTIEGNGEQWWDLPCKPHR 194
Query: 125 NSD-------CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA--- 174
D C PT IRF ++ ++G+K +S FH+ GC + ++ L I++
Sbjct: 195 GPDGKTVSGPCDSPTMIRFFMSSNLVLSGVKIQNSPMFHVKFDGCQGVLIDKLSISSPKL 254
Query: 175 -------HADSSK-----------------------DILVSEVFCGPGQGISVGSLGKGI 204
H +++ D+ + V C P GIS+GSLG
Sbjct: 255 SPNTDGIHLGNTRGVGIYNSMISNGDDCISIGPGCSDVDIEGVTCAPTHGISIGSLGVHN 314
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
V LTVRN + NG+R+KTW G + FE+I M NV N I+IDQ YC
Sbjct: 315 SQACVSNLTVRNTIIKESDNGLRIKTW-QGGTGSVTGLRFENIQMENVRNCIIIDQYYCM 373
Query: 265 YNKC 268
+C
Sbjct: 374 SKEC 377
>gi|357487387|ref|XP_003613981.1| Polygalacturonase [Medicago truncatula]
gi|355515316|gb|AES96939.1| Polygalacturonase [Medicago truncatula]
Length = 400
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 154/324 (47%), Gaps = 67/324 (20%)
Query: 3 LAARFSLLVSFITS------VRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNW 56
+ + F+LL+ ITS + D +N NV +GA DG TDDS AF +W +
Sbjct: 1 MKSLFTLLMFVITSQCLCGRITPDDGSN--FNVLTYGANGDGNTDDSNAFVKAWNDVCGT 58
Query: 57 DGIKGTVLVPPGK-YLVSFAEFEGPCKAS-ISFQLQGLLDL------------------- 95
T+++P GK +++ F+GPCK++ I +++G +
Sbjct: 59 TQGTPTLIIPEGKTFMLQPLSFQGPCKSTTIQVEVKGTITAPKDIEAWKWKDNKRRSWVQ 118
Query: 96 FSIDTSLSL-AKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRY 154
FS L++ +GT GQG W + + + D PT +F TI+ + ++S
Sbjct: 119 FSKINGLAVYGEGTIDGQGAPWW---KKYHDGDSNRPTAFQFIGCESLTISNLNHINSPR 175
Query: 155 FHINILGCYNLKLNDLKITAHADS---------------------------------SKD 181
HI+I C N +++L+I A +S S
Sbjct: 176 NHISIDSCKNASISNLQIIAPENSPNTDGIDIASSSNIIINNLSIKTGDDCIAINSGSNF 235
Query: 182 ILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASN 241
I ++ V CGPG GISVGSLGKG + V + V++CTFT T+NG R+KTW G A
Sbjct: 236 INITGVLCGPGHGISVGSLGKGGEYATVEEVHVKDCTFTGTTNGARIKTWKGGS-GYARK 294
Query: 242 FTFEDIVMNNVENPIVIDQLYCPY 265
T+E+I + V+NPI+I+Q Y P+
Sbjct: 295 ITYENIKLVEVKNPIIINQNYNPH 318
>gi|6648209|gb|AAF21207.1|AC013483_31 putative polygalacturonase [Arabidopsis thaliana]
Length = 438
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 130/291 (44%), Gaps = 55/291 (18%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKAS 84
R NV FGA A+G DDSKAF +W A + GI V Y++ F GPCK+S
Sbjct: 69 RSFNVNTFGAKANG-NDDSKAFMKAWEAACSSTGIVYIVAPKNRDYMLKAVTFSGPCKSS 127
Query: 85 ISFQLQGLLDLFSIDTSLSLAK----------------GTFHGQGETAWPLNQCHKNSDC 128
+ + G ++ + + + G G G WP C N
Sbjct: 128 LIIFIYGRIEAWENPSDYKERRHWIVFENVNNLRVEGGGRIDGNGHIWWP-KSCKINPQL 186
Query: 129 Q---LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------- 178
PT + F N+ ++ I+ +++ H+ C N+K +L +T+ ADS
Sbjct: 187 PCLGAPTAVTFVECNNLRVSNIRLENAQQMHLTFQDCKNVKALNLMVTSPADSPNTDGIH 246
Query: 179 --------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGL 212
S+++ + + CGPG GIS+GSLG+ + V +
Sbjct: 247 VSGTQNILIQDSIVRTGDDCISIVSGSENVRATGITCGPGHGISIGSLGEDNSEAYVSNV 306
Query: 213 TVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
V T T+NGVR+KTW H G+A N F+DI+M NV NPI+I+Q YC
Sbjct: 307 VVNKATLIGTTNGVRIKTWQGGH-GMAKNIIFQDIIMKNVTNPIIINQDYC 356
>gi|356570487|ref|XP_003553417.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 553
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 134/292 (45%), Gaps = 57/292 (19%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKAS 84
+ ++V D+GA +G TDD++AF +W + + ++VP YL+ F GPC+ +
Sbjct: 163 KKVSVNDYGAKGNGDTDDTEAFKKAWDVVCS--SGEAILVVPQANYLLKPIRFSGPCEPN 220
Query: 85 ISFQLQGLLD-----------------LFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSD 127
+ Q+ G LD +I GT G G W N C +N
Sbjct: 221 VEVQISGTLDASDDPSDYEDDSKHWLVFDNIKKLFVYGGGTIDGNGNIWWK-NSCKRNKK 279
Query: 128 --CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------ 178
C+ PT + F D T+ ++ +++ H++ N++++ L +TA DS
Sbjct: 280 RPCKDAPTALTFYNCEDLTVENLRIENAQQIHVSFQDSVNVQVSGLNVTAPEDSPNTDGI 339
Query: 179 ---------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVG 211
SKD+ +++ CGPG GIS+GSLG G E V G
Sbjct: 340 HVTNTQNIQISSSVIGTGDDCISIVHGSKDVEATDITCGPGHGISIGSLGAGKSKEFVSG 399
Query: 212 LTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
+ V T NGVR+KTW G AS+ F++I M+NV NPI+I+Q YC
Sbjct: 400 IRVNRAKIFGTKNGVRIKTWQGGS-GSASDIQFQNIEMDNVTNPIIINQNYC 450
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 197 VGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPI 256
+GSLG +E V G+ + T NGVR+KTW G ASN F++I M+N NPI
Sbjct: 22 IGSLGARKFEEIVSGILMDRAKIFGTKNGVRIKTWQGGS-GSASNIQFQNIEMDNGTNPI 80
Query: 257 VIDQLYCPYNKCNIKPKDSMPNIEIG 282
+ +Q YC K KD+M N G
Sbjct: 81 ITNQNYCD------KKKDAMQNTAHG 100
>gi|225450488|ref|XP_002276945.1| PREDICTED: polygalacturonase At1g48100 [Vitis vinifera]
gi|296089826|emb|CBI39645.3| unnamed protein product [Vitis vinifera]
Length = 464
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 133/304 (43%), Gaps = 64/304 (21%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
V NV+ FGAV DG+TDD++AF +W A + T+LVP G +++ F GPCK
Sbjct: 69 VFNVRSFGAVGDGVTDDTQAFKMTWDTACQAE--SATLLVPHGHSFMIQSTIFTGPCKTG 126
Query: 85 ISFQLQGL-------------------LDLFSIDTSLSLAKGTFHGQGETAWPLN-QCHK 124
+ FQ++G L + I+ G G+GE W L + HK
Sbjct: 127 LIFQIEGTIMAPDGPSSWPQGNSRRQWLVFYRINEMSMQGGGVIDGRGEKWWDLPCKPHK 186
Query: 125 NSD-------CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD 177
+ C P IRF ++ T+ G+K +S FH C N+ ++ L I A A+
Sbjct: 187 GINGTTLPGPCDSPVAIRFFTSSNLTVQGLKIKNSPQFHFRFDNCQNVHIDLLNIKAPAE 246
Query: 178 SS---------------------------------KDILVSEVFCGPGQGISVGSLGKGI 204
S ++ + + CGP GIS+GSLG
Sbjct: 247 SPNTDGIHIENTNGVKIYNSIVSNGDDCVSIGAGCHNVDIRNITCGPSHGISIGSLGIRN 306
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
V +TV + ++NGVR+KTW G S TF +I M+ V NPI+IDQ YC
Sbjct: 307 SRACVSNITVTDSIIKHSANGVRIKTWQGGS-GSVSKVTFNNIHMDTVRNPIIIDQYYCL 365
Query: 265 YNKC 268
C
Sbjct: 366 TKGC 369
>gi|356499681|ref|XP_003518665.1| PREDICTED: polygalacturonase At1g48100-like [Glycine max]
Length = 473
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 137/312 (43%), Gaps = 62/312 (19%)
Query: 21 DATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEG 79
+A++ + +V+ FGA+ DGITDD+++F +W A + +LVP G +++ F G
Sbjct: 71 NASSNLFDVRTFGAIGDGITDDTESFKMAWDTACESESPVKVILVPQGFSFVIQSTIFTG 130
Query: 80 PCKASISFQLQGLLD------------------LFSIDTSLSL-AKGTFHGQGETAWPLN 120
PCK + ++ G L +F +SL G G+G W L
Sbjct: 131 PCKGGLVLKVDGTLMPPDGPESWPKNNSKRQWLVFYRINGMSLEGSGLIDGRGAKWWDLP 190
Query: 121 -QCHKNSD-------CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKI 172
+ HK + C P IRF ++ T+ G++ +S FH GC ++ + + I
Sbjct: 191 CKPHKGPNGTTSPGPCDSPVAIRFFMSSNLTVQGLRIKNSPQFHFRFDGCESVHVESIYI 250
Query: 173 TAHADSS---------------------------------KDILVSEVFCGPGQGISVGS 199
TA A S D+ + + CGPG GIS+GS
Sbjct: 251 TAPALSPNTDGIHIENTNDVRIYNSVISNGDDCVSIGAGCHDVDIKNITCGPGHGISIGS 310
Query: 200 LGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVID 259
LG V +TVR+ NGVR+KTW G S TF +I M +V NPI+ID
Sbjct: 311 LGNHNSRACVSNITVRDSVIKVADNGVRIKTW-QGGSGSVSGVTFSNIHMESVRNPIIID 369
Query: 260 QLYCPYNKCNIK 271
Q YC C+ K
Sbjct: 370 QFYCLSKDCSNK 381
>gi|297811865|ref|XP_002873816.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297319653|gb|EFH50075.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 422
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 155/337 (45%), Gaps = 64/337 (18%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGP 80
+N ++V FGA+ DG TDD+KAF +W EA G +LVP GK +++ F GP
Sbjct: 34 GSNGFISVTSFGAIGDGETDDTKAFLKAW-EAVCKGGRNTKILVPQGKTFMLKPLAFIGP 92
Query: 81 CKAS-ISFQLQGLL----------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCH 123
CK+S ISF ++G L SI+ + GT +G W
Sbjct: 93 CKSSSISFSIRGNLVAPGYTWYAGRYPTWISFDSINGLVVTGGGTIDARGSLWWG----- 147
Query: 124 KNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----- 178
N + + P+ + FN N I+ ++ ++S H+ + N+++ +++TA DS
Sbjct: 148 -NVNTR-PSAMHFNNCNGLRISNLRHLNSPRNHVGLSCSQNIEVTGIRMTAPGDSPNTDG 205
Query: 179 ----------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVV 210
S I ++ +FCGPG GISVGSLG V
Sbjct: 206 IDISNCKGVHIHDSVIATGDDCIAINSGSSHINITGIFCGPGHGISVGSLGVTGDFATVE 265
Query: 211 GLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLY--CPYNKC 268
+ V+NCTFT T NGVR+KT+ + G A +FEDI+M ENPI+IDQ Y N
Sbjct: 266 EVRVKNCTFTNTQNGVRIKTYQNGS-GYARKISFEDIIMVASENPIIIDQTYHNGGTNGG 324
Query: 269 NIKPKDSMPNIEIG--NRNLVYNGVNVKVEGPETTSL 303
K +S N + R NG V+V +S+
Sbjct: 325 RSKSSNSYQNCHLAAKQRTQSGNGKGVRVSDVRYSSI 361
>gi|15237927|ref|NP_197222.1| polygalacturonase [Arabidopsis thaliana]
gi|10177065|dbj|BAB10507.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332005012|gb|AED92395.1| polygalacturonase [Arabidopsis thaliana]
Length = 421
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 143/320 (44%), Gaps = 73/320 (22%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGP 80
+N ++V FGA+ DG TDD+KAF +W EA G +LVP GK +++ F GP
Sbjct: 34 GSNGFISVTSFGAIGDGKTDDTKAFLKAW-EAVCKGGHNRKILVPQGKTFMLKPLTFIGP 92
Query: 81 CKAS-ISFQLQGLL----------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCH 123
CK+S IS ++G L SI+ + GT G+G W
Sbjct: 93 CKSSTISLSIRGNLVAPGYTWYAGRYTTWISFDSINGLVVTGGGTIDGRGSLWW------ 146
Query: 124 KNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----- 178
+ P + FN N I+ ++ ++S H+ + N+++ L++TA DS
Sbjct: 147 -GNVNNRPCAMHFNNCNGLRISNLRHLNSPRNHVGLSCSQNIEVRGLRMTAPGDSPNTDG 205
Query: 179 ----------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVV 210
S I ++ +FCGPG GISVGSLG E V
Sbjct: 206 IDISNCIGVHIHDSVIATGDDCIAINSGSSHINITGIFCGPGHGISVGSLGVTGDFETVE 265
Query: 211 GLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLY-------- 262
+ V+NCTFT T NGVR+KT+ + G A +FEDI M ENPI+IDQ Y
Sbjct: 266 EVRVKNCTFTKTQNGVRIKTYQNGS-GYARKISFEDINMVASENPIIIDQTYHNGGTNGG 324
Query: 263 -----CPYNKCNIKPKDSMP 277
Y C++ K P
Sbjct: 325 ISKSSSSYQNCHLTAKQRTP 344
>gi|194693572|gb|ACF80870.1| unknown [Zea mays]
Length = 416
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 153/382 (40%), Gaps = 92/382 (24%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
+L + DFGAV DGI +D++A +W A + K + VP GK Y + + GPCK
Sbjct: 33 LLTLDDFGAVGDGIANDTQALLDAWGAACS-SNQKAVLAVPAGKVYQIWPVQLSGPCKKK 91
Query: 85 ISFQLQGL------------------LDLFSIDTSLSLAKGTFHGQGETAWPLN-QCHKN 125
I + G L ++ +D GT G G+ W + K
Sbjct: 92 IKLLISGAIVAPSSPDEWAGRDPMKWLYVYGVDGLSVSGGGTIDGMGQQWWASTCKRKKT 151
Query: 126 SDC---QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSS--- 179
C P + F + ++ G+ +++ F + C +K + L++ A ADS
Sbjct: 152 QPCYSGPRPKAVHFEECREVSVQGVTLQNAQQFQLTFTRCSCVKASFLRVVAPADSPNTD 211
Query: 180 ------------------------------KDILVSEVFCGPGQGISVGSLGKGIKDEEV 209
D+ V ++ CGPG GIS+GSLGK + V
Sbjct: 212 GIHLNDTSHVRITDNLISTGDDCVSMVGNCSDVRVKDISCGPGHGISIGSLGKNRTTDMV 271
Query: 210 VGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPY---- 265
+ V C T T+NGVR+K+W G A + FE+IVM NV NPI+IDQ YC
Sbjct: 272 EDVKVDTCLLTNTTNGVRIKSW-QGGTGFARDLRFENIVMKNVSNPIIIDQYYCDQPTPC 330
Query: 266 ------------------------NKCNIKPKDSMP--NIEIGNRNLVYNGVNVKVEGPE 299
+I D++P ++E+ N NL G G
Sbjct: 331 ANQTQAVEVRKVEFAGIRGTSATPQAISIACSDAVPCRDLELANVNLTLEGGG----GGR 386
Query: 300 TTSLCSNVKPTLFGKQIPATCV 321
T+LC G +P +C+
Sbjct: 387 ATALCYRASGKSVGTVVPPSCL 408
>gi|125597502|gb|EAZ37282.1| hypothetical protein OsJ_21620 [Oryza sativa Japonica Group]
Length = 253
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 110/211 (52%), Gaps = 35/211 (16%)
Query: 93 LDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVD 151
+++ +D KG GQG W N C K C+ LP + +F+N+ ++GI V+
Sbjct: 1 MEIKRVDNLEFSGKGKIDGQGAAVWSKNTCAKKYICKILPNSLVLDFVNNGLVSGISLVN 60
Query: 152 SRYFHINILGCYNLKLNDLKITAHADS--------------------------------- 178
++FH+N+ C N+ + DL ITA DS
Sbjct: 61 PKFFHMNMFKCKNITIKDLTITAPEDSPNTDDIHICDSSKISIIDTVIGTGDDCISIGPG 120
Query: 179 SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPD-SHIG 237
++ I +S V CGPG GISVGSLG+ +++V +TV+NC ++NGVR+K++ D + +
Sbjct: 121 TEGINISGVTCGPGYGISVGSLGRYKDEKDVTDVTVKNCVLKKSTNGVRIKSYEDAASVL 180
Query: 238 IASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
S FT+++I M +V NPI+ID YCP C
Sbjct: 181 TTSKFTYKNIKMEDVANPIIIDMKYCPNKIC 211
>gi|115465197|ref|NP_001056198.1| Os05g0542800 [Oryza sativa Japonica Group]
gi|52353424|gb|AAU43992.1| unknown protein [Oryza sativa Japonica Group]
gi|113579749|dbj|BAF18112.1| Os05g0542800 [Oryza sativa Japonica Group]
Length = 408
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 126/294 (42%), Gaps = 58/294 (19%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
+L + DFGAV DGIT+D++AF +W A + VP GK Y + GPCK
Sbjct: 34 LLTLDDFGAVGDGITNDTQAFLDAWNAACA-STEPAVLAVPAGKTYQIWPVRLAGPCKKK 92
Query: 85 ISFQLQGL------------------LDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKN- 125
+ + G L +F +D GT G G W + K
Sbjct: 93 LKLMISGTIAAPASPDEWAGRDPTKWLYVFRVDDLSVSGGGTIDGMGAEWWARSCKRKKT 152
Query: 126 ---SDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKI---------- 172
S P ++F ++ GI + FH+ C ++K + L++
Sbjct: 153 KPCSTVSAPKALQFEECRRVSVQGITMQNGPQFHLMFTRCTDVKASFLRVVAPESSPNTD 212
Query: 173 ------TAHAD-----------------SSKDILVSEVFCGPGQGISVGSLGKGIKDEEV 209
T HA + D+ V ++ CGPG GIS+GSLGK + +
Sbjct: 213 GIHLNDTTHAQIMDNLISTGDDCVSMVGNCSDVRVKDISCGPGHGISIGSLGKNRTTDRI 272
Query: 210 VGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
+ V C T T+NGVR+K+W +G A N FE IVM NV NPI+IDQ YC
Sbjct: 273 ENVRVDTCLLTNTTNGVRIKSW-QGGMGYAHNLRFEGIVMKNVSNPIIIDQYYC 325
>gi|218190250|gb|EEC72677.1| hypothetical protein OsI_06235 [Oryza sativa Indica Group]
Length = 384
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 136/285 (47%), Gaps = 55/285 (19%)
Query: 75 AEFEGPCKASISFQLQGLL--------------DLFSIDTSLSLAKGTFHGQGETAWPLN 120
A GPC +SI +L G L ++ +D G GQG W N
Sbjct: 64 AAPSGPCTSSIILRLDGNLLGTGDLNAYKTNWIEVEHVDNFAINGHGIIDGQGPLVWTHN 123
Query: 121 QCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS- 178
QC+KN +C+ LP + ++ + T+ GI +S++FH+NI N+ ++ + IT+ DS
Sbjct: 124 QCNKNYNCKILPNSLVIDYSTNVTVRGITLKNSKFFHLNIYESKNVVIDKVTITSPGDSP 183
Query: 179 --------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKD 206
+K + V+ V CGPG GISVGSLG+ +
Sbjct: 184 NTDGIHVGDSTNITISSTTIAAGDDCISIGPGTKMVRVNGVRCGPGHGISVGSLGRYKDE 243
Query: 207 EEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGI-ASNFTFEDIVMNNVENPIVIDQLYCPY 265
++V + V NCT T+NG+R+K++ DS + A+ F ++ I M+NV PI+IDQ YCP
Sbjct: 244 KDVEDIIVTNCTIKGTTNGLRIKSYEDSKSQLRATKFLYDGITMDNVSYPIIIDQKYCPN 303
Query: 266 NKCNIKPKDSMPNIEIGNRNLVYNGVNVKVEGPETTSL-CSNVKP 309
N C+ + +I +N+V PE +L C+N P
Sbjct: 304 NICSASGTSKVAVTDIVFKNIVGTSAT-----PEAVTLNCANNLP 343
>gi|15224377|ref|NP_181914.1| putative polygalacturonase [Arabidopsis thaliana]
gi|75318034|sp|O22818.1|PGLR6_ARATH RecName: Full=Probable polygalacturonase At2g43860; Short=PG;
AltName: Full=Pectinase At2g43860; Flags: Precursor
gi|2281084|gb|AAB64020.1| putative polygalacturonase [Arabidopsis thaliana]
gi|67633604|gb|AAY78726.1| putative polygalacturonase/pectinase [Arabidopsis thaliana]
gi|330255242|gb|AEC10336.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 405
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 138/295 (46%), Gaps = 57/295 (19%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEG-PCK-AS 84
LNV +GA DG D +KAF +W A T++VP G++LV F G CK A
Sbjct: 33 LNVLSYGAKPDGSKDSTKAFLAAWDVAC-ASANPTTIIVPKGRFLVGNLVFHGNECKQAP 91
Query: 85 ISFQLQGLLDL---------------FSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQ 129
IS ++ G + F T +S+ G QG + W +C N
Sbjct: 92 ISIRIAGSIVAPEDFRIIASSKHWIWFEDVTDVSIYGGILDAQGTSLW---KCKNNGGHN 148
Query: 130 LPTPIR---FNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HA 176
PT + F+ N+ I+G+ S++S+ FHI I N+ ++ +K++A H
Sbjct: 149 CPTGAKSLVFSGSNNIKISGLTSINSQKFHIVIDNSNNVNIDGVKVSADENSPNTDGIHV 208
Query: 177 DSSK-----------------------DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLT 213
+SS ++ + + CGPG GIS+GSLG+ +++ V +T
Sbjct: 209 ESSHSVHITNSRIGTGDDCISIGPGSTNVFIQTIRCGPGHGISIGSLGRAEEEQGVDNVT 268
Query: 214 VRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
V N F T+NGVR+KTW A N F+ I M V+NPI+IDQ YC + C
Sbjct: 269 VSNVDFMGTNNGVRIKTWGKDSNSFARNIVFQHINMKMVKNPIIIDQHYCLHKPC 323
>gi|356555962|ref|XP_003546297.1| PREDICTED: polygalacturonase At1g48100-like isoform 1 [Glycine max]
Length = 479
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 134/304 (44%), Gaps = 64/304 (21%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
+ +V+ FGAV DG DD+ AF +W+EA + G VLVP + ++ F GPCK
Sbjct: 82 IFDVRSFGAVGDGSADDTDAFVAAWKEACAVE--SGVVLVPEDYCFKITSTIFTGPCKPG 139
Query: 85 ISFQLQGLLD-------------------LFSIDTSLSLAKGTFHGQGETAWPLN-QCHK 124
+ FQ+ G L + +D KGT G GE W L + H+
Sbjct: 140 LVFQVDGTLMAPDGPECWPKEDSHSQWLVFYRLDQMTLTGKGTIEGNGEQWWDLPCKPHR 199
Query: 125 NSD-------CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA--- 174
D C PT IRF ++ ++G+K +S FH+ GC + ++ L I++
Sbjct: 200 GPDGKTVSGPCDSPTMIRFFMSSNLVLSGVKIQNSPMFHVKFDGCQGVLIDKLSISSPKL 259
Query: 175 -------HADSSK-----------------------DILVSEVFCGPGQGISVGSLGKGI 204
H +++ D+ + V C P GIS+GSLG
Sbjct: 260 SPNTDGIHLGNTRGVGIYNSMISNGDDCISIGPGCSDVDIEGVTCAPTHGISIGSLGVHN 319
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
V LTVRN + NG+R+KTW G + FE+I M NV N I+IDQ YC
Sbjct: 320 SQACVSNLTVRNTIIKESDNGLRIKTW-QGGTGSVTGLRFENIQMENVRNCIIIDQYYCM 378
Query: 265 YNKC 268
+C
Sbjct: 379 SKEC 382
>gi|357442133|ref|XP_003591344.1| Polygalacturonase [Medicago truncatula]
gi|355480392|gb|AES61595.1| Polygalacturonase [Medicago truncatula]
Length = 478
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 135/308 (43%), Gaps = 63/308 (20%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGPCKAS 84
+L+V+ FGA+ DGITDD+++F +W A + + VPPG ++V F GPCK
Sbjct: 80 LLDVRKFGAIGDGITDDTESFKMAWDTACQSELDLNVIFVPPGFSFIVQSTIFTGPCKGG 139
Query: 85 ISFQ--------------------LQGLLDLFSIDTSLSLAKGTFHGQGETAWPLN-QCH 123
+ + + L + ++ GT G+G+ W L + H
Sbjct: 140 LVLKKVDGTIMTPDGPESWLKNNSRRQWLVFYRVNGMSLEGSGTIDGRGQKWWDLPCKPH 199
Query: 124 KNSD-------CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 176
K + C P IRF ++ T+ G++ +S FH GC ++ + + ITA A
Sbjct: 200 KGPNGTTLPGPCDSPVAIRFFMSSNLTVQGLRIKNSPQFHFRFDGCQSVHVESIFITAPA 259
Query: 177 DSSK---------------------------------DILVSEVFCGPGQGISVGSLGKG 203
S D+ + + CGPG GIS+GSLG
Sbjct: 260 LSPNTDGIHIENTNDVKIYNSVVSNGDDCVSIGSGCYDVDIKNITCGPGHGISIGSLGNH 319
Query: 204 IKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
V +TVR+ + NGVR+KTW G S TF +I M+ V+NPI+IDQ YC
Sbjct: 320 NSRACVSNITVRDSVIRVSDNGVRIKTWQGGS-GSVSGVTFSNIHMDTVKNPIIIDQFYC 378
Query: 264 PYNKCNIK 271
C+ K
Sbjct: 379 LSKDCSNK 386
>gi|326518002|dbj|BAK07253.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 435
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 142/321 (44%), Gaps = 59/321 (18%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK 60
+LL A + + + +D V NVKD+GA DG TDD+KAF +W A G
Sbjct: 11 ILLLAGLAWCSELVAAAGRVDG---VFNVKDYGARGDGTTDDTKAFVDAWTAACRARGSP 67
Query: 61 GTVLVPPG-KYLVSFAEFEGPCKAS-ISFQLQGLLD--------------LFSIDTSLSL 104
T+LVP ++V F GPC ++ I+ Q+ G + +F L++
Sbjct: 68 ATLLVPAANSFIVGPTRFSGPCASTRITVQVMGTITAPPAGAWRELEYWLMFYQVHGLTV 127
Query: 105 AKGT---FHGQGETAWPLNQCHKNSDCQLPTPIRFNFLN--DSTITGIKSVDSRYFHINI 159
G+ G+G T W +C ++DC P +N D ++ +S DS HI +
Sbjct: 128 TGGSTGLLDGRGGTWW-RKKCKDHADCISRAPTALVVMNCIDVELSQFRSKDSPQMHIAV 186
Query: 160 LGCYNLKLNDLKITA----------HADSSKDILVS-----------------------E 186
N+ + L ITA H D S + V+
Sbjct: 187 SMSSNVNVAQLTITAPWDSPNTDGVHIDRSDHVRVTGSTIGTGDDCVSIGSGTQFVTVDG 246
Query: 187 VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFED 246
+ CGPG G+SVGSLGK V + VRN F T NG R+KTW G A + +F D
Sbjct: 247 IVCGPGHGVSVGSLGKKGAAVSVEYIDVRNVQFINTMNGARIKTWQGGK-GYAKSISFTD 305
Query: 247 IVMNNVENPIVIDQLYCPYNK 267
I NVE+P+VI+Q Y ++
Sbjct: 306 INFTNVEHPVVINQFYVDHHH 326
>gi|350536629|ref|NP_001234256.1| polygalacturonase [Solanum lycopersicum]
gi|7381227|gb|AAF61444.1|AF138858_1 polygalacturonase [Solanum lycopersicum]
Length = 452
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 134/319 (42%), Gaps = 66/319 (20%)
Query: 8 SLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPP 67
SLL S + + V DFGA DGITDD+K+F W A + +++P
Sbjct: 44 SLLQLLPASASLRTKSESLFRVNDFGATGDGITDDTKSFKDVWDMACS-SPSHAKIVIPA 102
Query: 68 G-KYLVSFAEFEGPCKASISFQLQGLL----------DL--------FSIDTSLSLAKGT 108
G +LV F GPC++ +S ++ G + DL F + G
Sbjct: 103 GYSFLVRQINFAGPCRSKVSIRIAGTILAPKDPDVWDDLNPRKWIYFFKVKHLTVEGGGI 162
Query: 109 FHGQGETAWP-------LNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILG 161
G G+ W N CH PT + F+ N+ + IK +S+ H+ G
Sbjct: 163 IDGMGQEWWARSCKVNRTNPCH-----HAPTALTFHKCNNLKVKNIKIFNSQQMHLAFTG 217
Query: 162 CYNLKLNDLKITAHADS---------------------------------SKDILVSEVF 188
C ++ ++ L + A DS S I V ++
Sbjct: 218 CKHVTISQLVVKAPGDSPNTDAIHISSSTQVNVKDCIIGTGDDCISIVGNSSRIKVKDIV 277
Query: 189 CGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIV 248
CGPG GIS+GSLGK +V + V + + T NGVR+KTW G +FE++
Sbjct: 278 CGPGHGISIGSLGKSNSFSQVYNVHVNGASISNTENGVRIKTWQGGS-GFVKKVSFENVW 336
Query: 249 MNNVENPIVIDQLYCPYNK 267
M NV NPI+IDQ YC K
Sbjct: 337 MENVSNPIIIDQYYCDSRK 355
>gi|356547430|ref|XP_003542115.1| PREDICTED: probable polygalacturonase At3g15720-like [Glycine max]
Length = 422
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 143/316 (45%), Gaps = 59/316 (18%)
Query: 7 FSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP 66
F++L+ G+ +T NV +GAV +G T+DS AF +W+ A + +++P
Sbjct: 26 FTVLIILSVITPGLSSTTTSFNVLQYGAVGNGQTNDSPAFLKAWKAACQSNSHISRLIIP 85
Query: 67 PGK-YLVSFAEFEGPCKASISF-QLQGLLDL-----------------FSIDTSLSLA-K 106
+ +L+ F GPCK++ ++ QL G + FS L+++ K
Sbjct: 86 AKRTFLLKPTTFSGPCKSNYTYIQLSGNIIAPKTKSEYSGFHTNTWLGFSFVNGLAISGK 145
Query: 107 GTFHGQGETAWPLNQCHKN----SDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGC 162
GT G+G +AW C N + C+ PT + FN N + G S++ H+ + C
Sbjct: 146 GTIDGRG-SAWWQQPCVGNPLPGATCRPPTAVTFNRCNRLQLKGYTSINPARSHMTLTSC 204
Query: 163 YNLKLNDLKITAHADS---------------------------------SKDILVSEVFC 189
++++++ A S S I ++ + C
Sbjct: 205 KKGIISNIRLIAPGTSPNTDGIDISGSTDIQVLNSFIATGDDCIAISAGSSKIKITGITC 264
Query: 190 GPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVM 249
GPG GIS+GSLG + + V + V NCT T T GVR+KTW G A TFE I
Sbjct: 265 GPGHGISIGSLGTRGETDIVEDVHVENCTLTETLTGVRIKTW-QGGAGYARRITFEKIRF 323
Query: 250 NNVENPIVIDQLYCPY 265
NPI+IDQ YCP+
Sbjct: 324 VRANNPIIIDQFYCPH 339
>gi|356503952|ref|XP_003520763.1| PREDICTED: polygalacturonase At1g48100-like [Glycine max]
Length = 462
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 146/347 (42%), Gaps = 70/347 (20%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGPCKAS 84
+ +++ FGA+ DG TDD+++F +W A + +LVP G +LV F GPC+
Sbjct: 65 IFDLRKFGAIGDGETDDTESFKMAWDSACQSESAVNVILVPQGFSFLVQSTIFTGPCQGV 124
Query: 85 ISFQLQGLLD------------------LFSIDTSLSL-AKGTFHGQGETAWPLN-QCHK 124
+ ++ G L +F +SL G G+GE W L + HK
Sbjct: 125 LELKVDGTLMPPDGPESWPKNNSRHQWLVFYRINGMSLEGSGLIDGRGEKWWDLPCKPHK 184
Query: 125 NSD-------CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA--- 174
C P IRF ++ T+ G++ +S FH GC N+ + + ITA
Sbjct: 185 GPHGTTLPGPCDSPIAIRFFMSSNLTVQGLRIKNSPQFHFRFDGCKNVHIESIYITAPKL 244
Query: 175 -------HADSSKDILV-----------------------SEVFCGPGQGISVGSLGKGI 204
H +++ D+ + + CGPG GIS+GSLG
Sbjct: 245 SPNTDGIHIENTNDVKIYNSVISNGDDCVSIGSGCNDVDIKNITCGPGHGISIGSLGNHN 304
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
V + VR+ T NGVR+KTW G S TF +I M +V NPI+IDQ YC
Sbjct: 305 SRACVSNIMVRDSFIKVTDNGVRIKTWQGGS-GSVSGVTFSNIHMVSVRNPIIIDQFYCL 363
Query: 265 YNKCNIKPKDSMPNIEIGNRNLVYNGVN--VKVEGPETTSLCSNVKP 309
+C K + N++Y + + P CS+ P
Sbjct: 364 TKECTNKSS------AVSVSNIIYTNIKGTYDIRSPPMRFACSDSVP 404
>gi|218197199|gb|EEC79626.1| hypothetical protein OsI_20838 [Oryza sativa Indica Group]
Length = 426
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 148/376 (39%), Gaps = 82/376 (21%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
+L + DFGAV DGI +D++AF +W A + VP GK Y + GPCK
Sbjct: 34 LLTLDDFGAVGDGIANDTQAFLDAWNAACA-STEPAVLAVPAGKTYQIWPVRLAGPCKKK 92
Query: 85 ISFQLQGL------------------LDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKN- 125
+ + G L +F +D GT G G W + K
Sbjct: 93 LKLMISGTIAAPASPDEWAGRDPTKWLFVFRVDDLSVSGGGTIDGMGAEWWARSCKRKKT 152
Query: 126 ---SDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKI---------- 172
S P ++F ++ GI + FH+ C ++K + L++
Sbjct: 153 KPCSTVSAPKALQFEECRRVSVQGITMQNGPQFHLMFTRCTDVKASFLRVVAPESSPNTD 212
Query: 173 ------TAHAD-----------------SSKDILVSEVFCGPGQGISVGSLGKGIKDEEV 209
T HA + D+ V ++ CGPG GIS+GSLGK + +
Sbjct: 213 GIHLNDTTHAQIMDNLISTGDDCVSMVGNCSDVRVKDISCGPGHGISIGSLGKNRTTDRI 272
Query: 210 VGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC--PYNK 267
+ V C T T+NGVR+K+W +G A N FE IVM NV NPI+IDQ YC P
Sbjct: 273 ENVRVDTCLLTNTTNGVRIKSW-QGGMGYAHNLRFEGIVMKNVSNPIIIDQYYCDQPTPC 331
Query: 268 CNIKPKDSMPNIEIGN---------------------RNLVYNGVNVK-VEGPETTSLCS 305
N + IE R+L VN+ V G ++ C
Sbjct: 332 ANQTQAVEVRKIEFAGIRGTSATEQAIKLACSDAVPCRDLELRNVNLTMVGGGAASAFCH 391
Query: 306 NVKPTLFGKQIPATCV 321
G +PA+C+
Sbjct: 392 RASGKAAGAVVPASCL 407
>gi|297828103|ref|XP_002881934.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297327773|gb|EFH58193.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 405
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 135/295 (45%), Gaps = 57/295 (19%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEG-PCK-AS 84
LNV +GA DG D +KAF +W A ++VP G++LV F+G CK A
Sbjct: 33 LNVLSYGAKPDGSKDSTKAFLAAWDVAC-ASANPTMIIVPKGRFLVGNLVFQGNECKQAP 91
Query: 85 ISFQLQGLLDL---------------FSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQ 129
IS ++ G + F T +S+ G QG + W +C N
Sbjct: 92 ISIRIAGSIVAPGDFRIIAGSEHWISFEDVTDVSIYGGILDAQGTSLW---KCKNNGGHN 148
Query: 130 LPT---PIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-------- 178
PT + F+ N+ I G+ S++S+ FHI I N+ ++ +K++A A+S
Sbjct: 149 CPTGAKSLMFSGSNNIKINGLTSINSQRFHIVIDKSNNVNIDGVKVSADANSPNTDGIHV 208
Query: 179 -------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLT 213
S D+ + + CGPG GIS+GSLG+ +++ V +T
Sbjct: 209 ESSHSVHITNSRIGTGDDCISIGPGSTDVFIQTIQCGPGHGISIGSLGRAEEEQGVDNVT 268
Query: 214 VRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
V N F T NGVR+KTW A N F+ I M V+NPI+IDQ YC C
Sbjct: 269 VSNVDFMGTDNGVRIKTWGKDSNSFARNIVFQHINMKMVKNPIIIDQHYCLDKPC 323
>gi|356503153|ref|XP_003520376.1| PREDICTED: uncharacterized protein LOC100782390 [Glycine max]
Length = 760
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 128/290 (44%), Gaps = 58/290 (20%)
Query: 24 NRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKA 83
N NV DFGA +G +DDS AF ++W+ G V+ P G +LV+ +GPCKA
Sbjct: 401 NTFYNVMDFGAHGNGKSDDSHAFSSAWQHTCGTQGTSTLVIPPKGVFLVTNITLKGPCKA 460
Query: 84 -SISFQLQGLLDLFSIDT-----------------SLSLAKGTFHGQGETAWPLNQCHKN 125
SI LQG + + D ++ + G G G T W K
Sbjct: 461 RSIHILLQGKIVAPAKDAWAKGLDPLILISNLNGLTIDGSGGQIDGFGSTWW------KC 514
Query: 126 SDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------- 178
C P I F ND T+ + +S HI I GC +++ I A +S
Sbjct: 515 RSCLRPRVISFVSCNDLTVRKLSISNSPRAHITIDGCNGAIFSNINIHAPRNSPNTDGFD 574
Query: 179 ---SKDILVSE-----------------------VFCGPGQGISVGSLGKGIKDEEVVGL 212
SK+IL+ + + CGPG GIS+GSLGK E V +
Sbjct: 575 IAFSKNILIEDCTIATGDDCIAINGGSSYINATGIACGPGHGISIGSLGKHNAHETVEEI 634
Query: 213 TVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLY 262
V NC+FT T+NG R+KT P G A TFE I + NPI++DQ Y
Sbjct: 635 YVYNCSFTKTTNGARIKTVPGG-TGYAKRITFEKIKLIQTRNPIILDQFY 683
>gi|242037695|ref|XP_002466242.1| hypothetical protein SORBIDRAFT_01g004220 [Sorghum bicolor]
gi|241920096|gb|EER93240.1| hypothetical protein SORBIDRAFT_01g004220 [Sorghum bicolor]
Length = 452
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 131/293 (44%), Gaps = 58/293 (19%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
V ++ +GA DG DD++A +W A +LVP GK YL+ GPCK+S
Sbjct: 74 VFSLDRYGACGDGSHDDTQALARAWNAACA-SPQPAVLLVPGGKRYLLKLVTLSGPCKSS 132
Query: 85 ISFQLQGLLD------------------LFSIDTSLSLAKGTFHGQGETAWPLNQCHKNS 126
++ ++G L +D GT G GET W N C N
Sbjct: 133 VTVTVKGTLVASPNRSDWSDEDRRHWIVFRQVDRLTVNGAGTVDGNGETWWK-NSCKINK 191
Query: 127 DC---QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA--------- 174
+ PT + F+F + + V+S+ H++I C ++L L ITA
Sbjct: 192 ALPCKEAPTALSFHFCTSLRVQDLNVVNSQQIHMSIEDCTGVQLTGLSITAPGTSPNTDG 251
Query: 175 -HADSSKDILV-----------------------SEVFCGPGQGISVGSLGKGIKDEEVV 210
H S D+ V S+V CGPG GIS+GSLG EV
Sbjct: 252 IHITRSNDVQVTNCKIKTGDDCLSIESGTHNLHVSQVVCGPGHGISIGSLGDDNSRAEVS 311
Query: 211 GLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
G+T+ + T+NG R+KT+ G A + TF+++VM +V NPI+IDQ YC
Sbjct: 312 GITIDSVQLYGTTNGARIKTYQGGS-GYAKDITFQNMVMYDVANPIIIDQNYC 363
>gi|356571013|ref|XP_003553676.1| PREDICTED: polygalacturonase At1g48100-like [Glycine max]
Length = 462
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 146/347 (42%), Gaps = 70/347 (20%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGPCKAS 84
+L+V+ FGA+ DG TDD+ +F +W A + +LVP G +L+ F GPC+
Sbjct: 65 ILDVRKFGAIGDGETDDTGSFKMAWDSACQSESAVNVILVPQGFSFLIQSTIFTGPCQGV 124
Query: 85 ISFQLQGLLD------------------LFSIDTSLSL-AKGTFHGQGETAWPLN-QCHK 124
+ ++ G L +F +SL G G+GE W L + HK
Sbjct: 125 LVLKVDGTLMPPDGPESWPKNNSRHQWLVFYRINGMSLEGSGLIDGRGEKWWDLPCKPHK 184
Query: 125 NSD-------CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA--- 174
C P IRF ++ T+ G++ +S FH GC N+ + + ITA
Sbjct: 185 GPHGTTLPGPCDSPIAIRFFMSSNLTVQGLRIKNSPQFHFRFDGCKNVHIESIYITAPKL 244
Query: 175 -------HADSSKDILV-----------------------SEVFCGPGQGISVGSLGKGI 204
H +++ D+ + + CGPG GIS+GSLG
Sbjct: 245 SPNTDGIHIENTNDMKIYNSVISNGDDCVSIGSGCNDVDIKNITCGPGHGISIGSLGNHN 304
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
V + VR+ T NGVR+KTW G S TF +I M +V NPI+IDQ YC
Sbjct: 305 SRACVSNIMVRDSFIKVTDNGVRIKTWQGGS-GSVSGVTFSNIHMVSVRNPIIIDQFYCL 363
Query: 265 YNKCNIKPKDSMPNIEIGNRNLVYNGVN--VKVEGPETTSLCSNVKP 309
+C K + N++Y + + P CS+ P
Sbjct: 364 TKECTNKTS------AVSVSNIIYTNIKGTYDIRSPPMRFACSDSVP 404
>gi|449436309|ref|XP_004135935.1| PREDICTED: polygalacturonase QRT2-like [Cucumis sativus]
Length = 458
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 150/324 (46%), Gaps = 64/324 (19%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGP 80
A+ + NV D+GA+ DG DDS+AF +W++A + LVP + Y + F GP
Sbjct: 80 ASPEIFNVDDYGAMGDG-EDDSEAFKETWKDACS--STNAIFLVPCDRVYHLKPITFTGP 136
Query: 81 CKASISFQLQGLLD----------------LFSIDTSLSL-AKGTFHGQGETAWPLNQCH 123
C + + F+++G + +F L + KG +G G W LN C
Sbjct: 137 CNSPLLFKIEGTIKASPHISDYEKDRRHWIIFQNLLGLRVEGKGIINGNGRKWW-LNSCK 195
Query: 124 KNSDC---QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-- 178
N + PT + F + + G++ +++ H++ C N+K +L I + +S
Sbjct: 196 VNKTLPCKEAPTAVTFFQCTNLRVEGLRFRNAQQMHLSFQKCNNVKALNLWIHSPGNSPN 255
Query: 179 -------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDE 207
SK++ + CGPG GIS+GSLG G +
Sbjct: 256 TDGIHVTGTQFIVIKNCLIMTGDDCLSIVSGSKNVRAKGITCGPGHGISIGSLGAGKTEA 315
Query: 208 EVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
EV + V F+ T+NGVR+KTW G A N F++IVM+NV NPI+IDQ YC +
Sbjct: 316 EVSNVVVDTAKFSGTTNGVRIKTWQGGK-GYAQNIIFQNIVMDNVTNPIIIDQNYCDQKE 374
Query: 268 CNIKPKDSMPNIEIGNRNLVYNGV 291
+ D+ +E+ N+VY +
Sbjct: 375 PCTQQADA---VEVS--NVVYQNI 393
>gi|356558039|ref|XP_003547316.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 408
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 138/295 (46%), Gaps = 58/295 (19%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFA-EFEGPCK-ASI 85
NV DFGA DG TD + AF ++W +A + + G + VP G++L++ A F G C +I
Sbjct: 42 NVVDFGAKPDGATDATAAFLSAWNKACSSNKPAG-IHVPQGRFLIARAVTFHGQCANRAI 100
Query: 86 SFQLQGLLDL---------------FSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQL 130
S ++G L F + +S+ G +G W C +
Sbjct: 101 SITIRGTLVAPSQYTFVGNSLYWLTFDQVSGVSIHGGVLDARGSFLW---DCKYKATPNC 157
Query: 131 PT-PIRFNFLNDS--TITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSS-------- 179
P F N ITG+ S++S+ HI I C+N+K++ +K+ A +S
Sbjct: 158 PIGAATLGFTNSEHIVITGLTSLNSQLVHILINACHNVKMHGVKLMADGNSPNTDGIHVK 217
Query: 180 -------------------------KDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTV 214
+++ V +V CGPG GIS+GSLG + + V +TV
Sbjct: 218 FSTDVTILAPRIRTGDDCISVGPGCRNLWVEDVACGPGHGISIGSLGWDLDEPGVKNVTV 277
Query: 215 RNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPY-NKC 268
R TF+ T NG R+K+W G + FE M++V+NPI+IDQ YCP+ N C
Sbjct: 278 RKATFSKTQNGFRIKSWGRPSSGFVEDVHFEHATMSDVQNPIIIDQHYCPFRNGC 332
>gi|114841683|dbj|BAF32143.1| pollen allergen [Chamaecyparis obtusa]
Length = 419
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 134/295 (45%), Gaps = 62/295 (21%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG--KYLVSFAEFEGPCKA 83
V NV+ +GAV DG D ++AF+T+W A VLV P K+ V+ F GPC+
Sbjct: 28 VFNVEQYGAVGDGKHDSTEAFETAWNAACK---KASAVLVVPANKKFFVNNLVFRGPCQP 84
Query: 84 SISFQLQGLLDL---------------FSIDTSLSL-AKGTFHGQGETAWPLNQCH---- 123
+SF++ G + F+ T +L G GQG+ W QC
Sbjct: 85 HLSFKVDGTIVAQPDPARWKNSKIWLQFAQLTDFNLMGTGVIDGQGQQWWA-GQCKVVNG 143
Query: 124 --KNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--- 178
+D PT I+ ++ T+ + ++S FH+ C +K+ LKI A DS
Sbjct: 144 RTVCNDRNRPTAIKIDYSKSVTVKELTLMNSPEFHLVFGECEGVKIQGLKIKAPRDSPNT 203
Query: 179 ------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEE 208
S +I + ++ CGPG GIS+GSLG+ E
Sbjct: 204 DGIDIFASKRFHIEKCVIGTGDDCIAIGTGSSNITIKDLICGPGHGISIGSLGRDNSRAE 263
Query: 209 VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
V + V F T NG+R+KTW G+AS T+E++ M N ENPI+I+Q YC
Sbjct: 264 VSHVHVNRAKFIDTQNGLRIKTWQGGS-GLASYITYENVEMINSENPILINQFYC 317
>gi|357127462|ref|XP_003565399.1| PREDICTED: probable polygalacturonase At3g15720-like [Brachypodium
distachyon]
Length = 567
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 130/295 (44%), Gaps = 56/295 (18%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGPCKASIS 86
+V DF A DG TDD+ AF +W+ A + DG +++P G +L+S F+G CK+ I+
Sbjct: 198 SVLDFHAAGDGKTDDAPAFLEAWQTACS-DGSSPVLVIPGGWTFLLSKIRFQGSCKSPIT 256
Query: 87 FQLQG---------------LLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDC-QL 130
QL G LL + ID G G+G W C+ + C
Sbjct: 257 VQLDGNIVAPNYIWTAESDNLLTFYRIDNLTVAGNGQIDGRGAIWW---SCYNHKRCTHR 313
Query: 131 PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------ 178
P + F + N+ + I DS H+ + C ++ + +TA A S
Sbjct: 314 PNLLAFAYCNNLWVRNIHLKDSAEKHMTLYRCSQAHVDSVSVTAPAHSPNTDGINMALSD 373
Query: 179 ---------------------SKDILVSEVFCGPGQGISVGSLGKG-IKDEEVVGLTVRN 216
+ D V++ CGPG GISVGSLG K V +TV N
Sbjct: 374 HVYISSCSMQTGDDCVSILSGTTDAYVTDTTCGPGHGISVGSLGGANSKSALVERITVSN 433
Query: 217 CTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK 271
C+F T GVR+K+W G A+ F FE++ M V PI IDQ YCP C +
Sbjct: 434 CSFVGTLTGVRIKSW-QGGTGKANGFLFENLNMTAVRFPIDIDQFYCPPGNCPTR 487
>gi|224104077|ref|XP_002313308.1| predicted protein [Populus trichocarpa]
gi|222849716|gb|EEE87263.1| predicted protein [Populus trichocarpa]
Length = 376
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 138/296 (46%), Gaps = 58/296 (19%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGP 80
++ +V+NV DFGA ADG TDDS+AF +W EA + G +++P K Y + F GP
Sbjct: 4 SSAKVVNVDDFGAKADG-TDDSQAFKKAWEEACSSKG-SAIIVIPKNKIYYLKPVTFSGP 61
Query: 81 CKASISFQLQGLLD-----------------LFSIDTSLSLAKGTFHGQGETAWPLNQC- 122
C++ + F++ G + ++ GT G G+ W N C
Sbjct: 62 CESDLVFKIFGTIKASAKVSDYENDRRHWLVFENVQNFRVRGGGTIDGNGKIWWE-NSCK 120
Query: 123 -HKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-- 178
+K+ CQ PT + F + ++ +++ H++ C N++ +L + A S
Sbjct: 121 INKSQPCQHAPTAVTFLECKSLIVANLRFQNAQQMHLSFQNCVNVRALNLMVIAPGTSPN 180
Query: 179 -------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDE 207
SK++ +++ CGPG GIS+GSLG
Sbjct: 181 TDGIHVTGTQNIRIRNCVIRTGDDCISIVSGSKNVEATDITCGPGHGISIGSLGADNSGA 240
Query: 208 EVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
EV + V T + T+NGVR+KTW G A N F+++VM NV NPI+I+Q YC
Sbjct: 241 EVSNVFVNRATISGTTNGVRIKTWQGGS-GYARNIVFQNVVMRNVTNPIIINQNYC 295
>gi|222159961|gb|ACM47314.1| polygalacturonase [Capsicum annuum]
Length = 368
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 142/309 (45%), Gaps = 53/309 (17%)
Query: 10 LVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK 69
+ + +++ ++ ++++V FGA DG TDD++AF +W++A + + V+
Sbjct: 52 ISHYFNNIKMVENKVKLIDVSSFGAKGDGNTDDTRAFKQAWQDACSSNTPVNFVVQQNKN 111
Query: 70 YLVSFAEFEGPCKASISFQLQGLLD----------------LFSIDTSLSLAKGTFHGQG 113
YL+ F GPCK+ IS Q+ G L+ LF +L + G
Sbjct: 112 YLLKNIHFLGPCKSFISMQIFGTLEASDNMSDYNNDRRHWILFENVENLVVGGGGTINGN 171
Query: 114 ETAWPLNQC--HKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
W N C +KN C+ PT + F N + +K +++ H++ C N++ ++L
Sbjct: 172 GNIWWQNSCKINKNLPCKDTPTALTFYNCNKLKVKNLKIKNAQQIHVSFETCTNVEASNL 231
Query: 171 KITAHADS---------------------------------SKDILVSEVFCGPGQGISV 197
I + +S S+ + +++ CGPG GIS+
Sbjct: 232 MINSPENSPNTDGIHVANTHNIQISSATIGTGDDCISITSGSQKVHATDITCGPGHGISI 291
Query: 198 GSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIV 257
GSLG G + V + V F T+NG+R+KTW G ASN F+ I M VENPI+
Sbjct: 292 GSLGSGNSEAHVSDINVYGAKFYGTTNGLRIKTWQGGS-GSASNIKFQHIDMEGVENPII 350
Query: 258 IDQLYCPYN 266
IDQ YC N
Sbjct: 351 IDQNYCDQN 359
>gi|356571056|ref|XP_003553697.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase At1g48100-like
[Glycine max]
Length = 503
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 146/346 (42%), Gaps = 69/346 (19%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
V NVK FGAV DG++DD++AF +W A + + GT+ VP G +++ F GPC +
Sbjct: 104 VFNVKSFGAVGDGVSDDTEAFKLAWDAACHAEE-SGTLFVPKGHIFMIQSTTFTGPCNSK 162
Query: 85 ISFQLQG-------------------LLDLFSIDTSLSLAKGTFHGQGETAWPLN-QCHK 124
++F++ G L + I+ L G G+GE W L+ + HK
Sbjct: 163 LTFKVDGTIWPPDGPDSWPLSSRKRQWLVFYRINGMLMQGSGLIDGRGEKWWNLSYKSHK 222
Query: 125 --NSDCQL-----PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD 177
N QL P IRF ++ + G+K +S FH C N+ + L I + A
Sbjct: 223 GANGAKQLGPGDRPVAIRFFESSNLRVEGLKIKNSPKFHFRFDECQNVHVEKLIIKSPAL 282
Query: 178 SSK---------------------------------DILVSEVFCGPGQGISVGSLGKGI 204
S ++ + + CGP GIS+GSLG
Sbjct: 283 SPNTDGIHIENTTNVNIHNSVISNGDDCVSVGAGCYNVDIRNITCGPSHGISIGSLGNYN 342
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
V +TV + + NGVR+KTW G S F +I M+ V NPI+IDQ YCP
Sbjct: 343 SRACVSNITVSDSIIKHSDNGVRIKTWQGGR-GAVSKVVFNNIQMDTVRNPIIIDQYYCP 401
Query: 265 YNKC-NIKPKDSMPNIEIGNRNLVYNGVNVKVEGPETTSLCSNVKP 309
C N S+ N+ N Y+ P CS+ P
Sbjct: 402 SKNCHNQSYAVSVSNVSYSNIKGTYDA-----RSPPMRFACSDSVP 442
>gi|255648183|gb|ACU24545.1| unknown [Glycine max]
Length = 443
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 148/338 (43%), Gaps = 73/338 (21%)
Query: 1 LLLAARFSLLVSFITSVR-------GIDATNRVLNVKDFGAVADGITDDSKAFDTSWREA 53
L++A FS+ S T+ R A+ NV D+GA DG DD+KAF+ +W A
Sbjct: 13 LIIAIAFSVWSSSCTAARVSHWRKLKAAASATSFNVLDYGAKGDGHADDTKAFEDAWAAA 72
Query: 54 WNWDGIKGTVLVPPGK-YLVSFAEFEGP-CKASISFQLQG-----------------LLD 94
+G T++VP G +LV F GP C+ +I FQL G L+
Sbjct: 73 CKVEG--STMVVPSGSVFLVKPISFSGPNCEPNIVFQLDGKIIAPTSSEAWGSGTLQWLE 130
Query: 95 LFSIDTSLSLAKGTFHGQGETAWPLNQCHKN-------SDCQL----PTPIRFNFLNDST 143
++T KG GQG W + N S+ +L PT +RF + T
Sbjct: 131 FSKLNTITIRGKGVIDGQGSVWWNNDSPTYNPTEVMLESNGRLPSTKPTALRFYGSDGVT 190
Query: 144 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSS------------------------ 179
+TGI +S+ H+ C N++++ + +++ DS
Sbjct: 191 VTGITIQNSQQTHLKFDSCTNVQVSGISVSSPGDSPNTDGIHLQNSQNVVVYSSTLACGD 250
Query: 180 ---------KDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKT 230
DI V V CGPG GIS+GSLG+ V +TVR+ T T GVR+KT
Sbjct: 251 DCVSIQTGCSDIYVHNVNCGPGHGISIGSLGRENTKACVRNVTVRDVTIQNTLTGVRIKT 310
Query: 231 WPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
W G N F ++ ++ V+ PI IDQ YC +C
Sbjct: 311 WQGGS-GSVQNIMFSNVQVSGVQTPISIDQYYCDGGRC 347
>gi|115462973|ref|NP_001055086.1| Os05g0279900 [Oryza sativa Japonica Group]
gi|113578637|dbj|BAF17000.1| Os05g0279900 [Oryza sativa Japonica Group]
gi|125551651|gb|EAY97360.1| hypothetical protein OsI_19283 [Oryza sativa Indica Group]
gi|222630956|gb|EEE63088.1| hypothetical protein OsJ_17896 [Oryza sativa Japonica Group]
Length = 485
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 138/305 (45%), Gaps = 66/305 (21%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPP--GKYLVSFAEFEGPCKA 83
V +V+ FGAV DG TDD++AF +WR A ++ V+ P G + ++ F GPCK
Sbjct: 89 VFDVRAFGAVGDGTTDDTEAFRAAWRAAC---AVESAVISVPSDGTFTITTTTFTGPCKP 145
Query: 84 SISFQLQGLLD------------------LFSIDTSLSL-AKGTFHGQGETAWPLN-QCH 123
+ FQ+ G+L +FS L+L GT G GE W L + H
Sbjct: 146 GLVFQVDGVLMPPDGPDCWPPSDNRRQWLVFSNLDGLTLRGAGTIEGNGEGWWNLPCKPH 205
Query: 124 KNSD-------CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 176
+ + C PT +RF + + G++ +S FH GC +++++ L I + A
Sbjct: 206 RGPNGSTLRGPCDSPTLVRFFMSRNLVVEGLRVENSPEFHFRFDGCSDVRVDGLSIRSPA 265
Query: 177 DS---------------------------------SKDILVSEVFCGPGQGISVGSLGKG 203
+S S D+ + V CGPG GIS+GSLG
Sbjct: 266 NSPNTDGIHVENTQRVAIYNSMISNGDDCISIGTGSYDVDIQNVSCGPGHGISIGSLGVH 325
Query: 204 IKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
V +TVRN + NG+R+KTW +G S F+ + M NV N I+IDQ YC
Sbjct: 326 NSQACVANVTVRNAVIRNSDNGLRIKTW-QGGMGSVSGINFDTVSMENVRNCIIIDQYYC 384
Query: 264 PYNKC 268
+C
Sbjct: 385 LDKRC 389
>gi|351724723|ref|NP_001238091.1| polygalacturonase PG1 precursor [Glycine max]
gi|5669846|gb|AAD46483.1| polygalacturonase PG1 [Glycine max]
Length = 443
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 148/338 (43%), Gaps = 73/338 (21%)
Query: 1 LLLAARFSLLVSFITSVR-------GIDATNRVLNVKDFGAVADGITDDSKAFDTSWREA 53
L++A FS+ S T+ R A+ NV D+GA DG DD+KAF+ +W A
Sbjct: 13 LIIAIAFSVWSSSCTAARVSHWRKLKAAASATSFNVLDYGAKGDGHADDTKAFEDAWAAA 72
Query: 54 WNWDGIKGTVLVPPGK-YLVSFAEFEGP-CKASISFQLQG-----------------LLD 94
+G T++VP G +LV F GP C+ +I FQL G L+
Sbjct: 73 CKVEG--STMVVPSGSVFLVKPISFSGPNCEPNIVFQLDGKIIAPTSSEAWGSGTLQWLE 130
Query: 95 LFSIDTSLSLAKGTFHGQGETAWPLNQCHKN-------SDCQL----PTPIRFNFLNDST 143
++T KG GQG W + N S+ +L PT +RF + T
Sbjct: 131 FSKLNTITIRGKGVIDGQGSVWWNNDSPTYNPTEVMLESNGRLPSTKPTALRFYGSDGVT 190
Query: 144 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSS------------------------ 179
+TGI +S+ H+ C N++++ + +++ DS
Sbjct: 191 VTGITIQNSQQTHLKFDSCTNVQVSGISVSSPGDSPNTDGIHLQNSQNVVIYSSTLACGD 250
Query: 180 ---------KDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKT 230
DI V V CGPG GIS+GSLG+ V +TVR+ T T GVR+KT
Sbjct: 251 DCVSIQTGCSDIYVHNVNCGPGHGISIGSLGRENTKACVRNVTVRDVTIQNTLTGVRIKT 310
Query: 231 WPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
W G N F ++ ++ V+ PI IDQ YC +C
Sbjct: 311 WQGGS-GSVQNIMFSNVQVSGVQTPISIDQYYCDGGRC 347
>gi|351723133|ref|NP_001237524.1| polygalacturonase precursor [Glycine max]
gi|85376233|gb|ABC70314.1| polygalacturonase precursor [Glycine max]
Length = 440
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 135/297 (45%), Gaps = 62/297 (20%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAE--FEGPCKAS 84
++V DFGA ADG +DDS+AF +W EA + +G +LV P + F GPC+ +
Sbjct: 72 VSVDDFGAKADG-SDDSEAFGKAWNEACS----RGAILVVPENRIYRLKPIIFSGPCRPN 126
Query: 85 ISFQLQGLLD----------------LFSIDTSLSLAKGTFHGQGETAWPLNQCHKNS-- 126
+F L G ++ +F ++ + G W + C N+
Sbjct: 127 TAFMLYGTIEAWSQMSAYQEDRQHWIVFDSVSNFRVGGGGTFNGKGKKWWQSSCKVNTNL 186
Query: 127 ---DCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----- 178
D P + F N+ +T ++ D+ H+ GC+N+ +++L I A DS
Sbjct: 187 PCNDGPRPKAVTFYQCNNLKVTNLRFKDAPQMHVVFEGCFNVIVSNLVIRAPGDSPNTDG 246
Query: 179 ----------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVV 210
S+++ +++ CGPG GIS+GSLG + EV
Sbjct: 247 IHVADTQNIVISNSDIGTGDDCISIISGSQNVRATDITCGPGHGISIGSLGADNSEAEVS 306
Query: 211 GLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
+ V T T T+NGVR+KTW G A N F +I M NV NPI+IDQ YC +K
Sbjct: 307 NVVVNRATLTGTTNGVRIKTWQGGS-GYARNIKFLNIAMQNVTNPIIIDQYYCDQSK 362
>gi|226503533|ref|NP_001142092.1| uncharacterized protein LOC100274254 precursor [Zea mays]
gi|194707086|gb|ACF87627.1| unknown [Zea mays]
gi|413932713|gb|AFW67264.1| hypothetical protein ZEAMMB73_031497 [Zea mays]
Length = 487
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 136/306 (44%), Gaps = 63/306 (20%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKASI 85
++ +GA DG DD++A +W EA + +LVP GK YL+ GPCK+S+
Sbjct: 93 FSLDSYGARGDGRHDDTQALARAW-EAACFSPRPAVLLVPGGKRYLLKLVALSGPCKSSV 151
Query: 86 SFQLQGLLDLFSIDTS-----------------------LSLAKGTFHGQGETAWPLNQC 122
+ ++G L + S D S L++ G W + C
Sbjct: 152 TVTVEGTL-VASRDRSDWIGGGGGTDRRRHWIVFRQVDGLTVGGGGAVDGSGETWWKHSC 210
Query: 123 HKNSDC---QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----- 174
N D + PT + F++ + +K VDS+ H++I C ++L L ITA
Sbjct: 211 KINKDLPCEEAPTALSFHYCTSLRVHDLKIVDSQQIHVSIEDCTGVQLTGLSITAPGTSP 270
Query: 175 -----HADSSKDIL-----------------------VSEVFCGPGQGISVGSLGKGIKD 206
H S+D+ VS++ CGPG GIS+GSLG
Sbjct: 271 NTDGIHITRSRDVQVTNCKIKTGDDCLSIEAGTHDLHVSQIVCGPGHGISIGSLGDDNSR 330
Query: 207 EEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYN 266
EV G+T+ T+NG R+KT+ G A + TF+++ M+ VENPIVIDQ YC
Sbjct: 331 AEVSGITIDTVQLYGTTNGARIKTYQGGS-GYARDITFQNMAMHGVENPIVIDQDYCDKR 389
Query: 267 KCNIKP 272
+ P
Sbjct: 390 QATSPP 395
>gi|114841681|dbj|BAF32142.1| pollen allergen [Taxodium distichum]
Length = 465
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 135/295 (45%), Gaps = 62/295 (21%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG--KYLVSFAEFEGPCKA 83
V NV+ +GAV DG D ++AF +W+ A +L PG K++V+ F GPC+
Sbjct: 28 VFNVEKYGAVGDGKHDCTEAFSRAWQAACK---KPSAMLFVPGNKKFVVNNLFFSGPCQP 84
Query: 84 SISFQLQGLLDLFSIDTS----------------LSLAKGTFHGQGETAWPLNQC----- 122
F++ G++ + S + + KG GQG+ W + QC
Sbjct: 85 HFIFKVDGIIAAYQNPASWKNNRIWLQFAKLTNFILMGKGVIDGQGKQWW-VGQCKWING 143
Query: 123 -HKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--- 178
+D PT I+ +F I G+ ++S FH+ C +K+ + I A +S
Sbjct: 144 REICNDRNRPTAIKIDFSKAVIIQGLTLMNSPEFHLAFGNCEGVKIIGINIKAPRNSPNT 203
Query: 179 ------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEE 208
S I++ ++ CGPG GIS+GSLG+G E
Sbjct: 204 DGIDIFASKNFVIQKNTIGTGDDCVAIGTGSSHIVIKDLICGPGHGISIGSLGRGNSRAE 263
Query: 209 VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
V + V F T NG+R+KTW G+AS+ T+E++ M N ENPI+I+Q YC
Sbjct: 264 VSYVHVNGAKFIDTQNGLRIKTWQGGS-GLASHITYENVEMVNSENPIIINQFYC 317
>gi|357450939|ref|XP_003595746.1| Polygalacturonase [Medicago truncatula]
gi|355484794|gb|AES65997.1| Polygalacturonase [Medicago truncatula]
Length = 444
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 136/296 (45%), Gaps = 65/296 (21%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK--YLVSFAEFEGPCKA 83
+++V DFGA ADG DD +AF +W EA + KG VLV P Y + F GPC+
Sbjct: 73 MVSVDDFGARADG-RDDWEAFKKAWNEACS----KGYVLVVPKNRIYRLKPITFSGPCQP 127
Query: 84 SISFQLQGLLDLFSIDTSLSLAK-----------------GTFHGQGETAWPLNQCHKNS 126
+ +F L G ++ +S ++ + GTF+G G+ W N C ++
Sbjct: 128 NTAFMLYGTIEAWSQMSAYEEDRQHWIVFDSVSNFKVDGGGTFNGNGKKWWE-NSCKYSN 186
Query: 127 ------DCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-- 178
D PT + F + + ++ DS+ H+ C+N+ +++L + A DS
Sbjct: 187 NNLPCNDEPRPTAVTFYDCKNLKVKNLRFKDSQQMHVVFERCFNVFVSNLIVRAPEDSPN 246
Query: 179 -------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDE 207
SK++ ++ CGPG GIS+GSLG +
Sbjct: 247 TDGIHVAETQNIDIINCDIGTGDDCISIVSGSKNVRAIDITCGPGHGISIGSLGADNSEA 306
Query: 208 EVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
EV + V T T+NGVR+KTW G A N F +I M NV NP++IDQ YC
Sbjct: 307 EVSNVVVNRAALTGTTNGVRIKTWQGGS-GYARNIKFMNIKMQNVTNPVIIDQYYC 361
>gi|356503450|ref|XP_003520521.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 461
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 133/292 (45%), Gaps = 57/292 (19%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKAS 84
+ L+V D+GA +G DD++AF +W + + ++VP YL+ F GPC+ +
Sbjct: 71 KKLSVNDYGAKGNGDADDTEAFKKAWDVVCS--SGEAILVVPQANYLLKPIRFSGPCEPN 128
Query: 85 ISFQLQGLLD-----------------LFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSD 127
+ Q+ G L+ ++ GT G G+ W N C +N
Sbjct: 129 VEVQISGTLEASDDPSDYEDDRRHWLVFDNVKKLFVYGGGTIDGNGKIWWK-NSCKRNKK 187
Query: 128 --CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------ 178
C+ PT + F D T+ + +++ H++ N+K++ L +TA DS
Sbjct: 188 RPCKDAPTALTFYNCEDLTVENLSIENAQQIHVSFQDSVNIKVSGLTVTAPEDSPNTDGI 247
Query: 179 ---------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVG 211
SKD+ +++ CGPG GIS+GSLG G E V G
Sbjct: 248 HVTNTQNIQISSSVIGTGDDCISIVHGSKDVEATDITCGPGHGISIGSLGSGKSKEFVSG 307
Query: 212 LTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
+ V T NGVR+KTW G AS+ F++I M+NV NPI+I+Q YC
Sbjct: 308 IRVNRAKIFGTKNGVRIKTWQGGS-GSASDIQFQNIGMDNVTNPIIINQNYC 358
>gi|326528133|dbj|BAJ89118.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 414
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 132/317 (41%), Gaps = 56/317 (17%)
Query: 2 LLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKG 61
+L +L + + + G +L + DFGAV DG+ +D++AF +W A +
Sbjct: 12 VLRGLVALAGAAVLCLSGAAEARVLLTLDDFGAVGDGVANDTQAFVDAWTAACGSEEEAV 71
Query: 62 TVLVPPGKYLVSFAEFEGPCKASISFQLQGL------------------LDLFSIDTSLS 103
+ Y + + GPCK + + G L ++ +D
Sbjct: 72 VAVPAAKAYQIWPVQLSGPCKKKLKLLIAGTIVAPASPDEWAGRDPMKWLYVYGVDGLSV 131
Query: 104 LAKGTFHGQGETAWPLNQCHKNSD-CQL---PTPIRFNFLNDSTITGIKSVDSRYFHINI 159
GT G G W + KN+ C P + F ++ G+ + FH++
Sbjct: 132 SGGGTIDGVGHEWWARSCKRKNTQPCNTRPPPRAVHFEECRGVSVQGVTLQNGPQFHLSF 191
Query: 160 LGCYNLKLNDLKITAHADSS---------------------------------KDILVSE 186
C ++K N L++ A ADS D+ V +
Sbjct: 192 TRCVDVKANFLRVVAPADSPNTDGIHLNDSSRVQIMDNLISTGDDCVSMVGNCSDVRVRD 251
Query: 187 VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFED 246
+ CGPG GIS+GSLGK + V + V C T T+NGVR+K+W G A + FE
Sbjct: 252 ISCGPGHGISIGSLGKNRTTDRVENVRVDTCLLTNTTNGVRIKSW-QGGTGSARDLRFEG 310
Query: 247 IVMNNVENPIVIDQLYC 263
IVM NV NPI+IDQ YC
Sbjct: 311 IVMKNVSNPIIIDQYYC 327
>gi|226506034|ref|NP_001151886.1| polygalacturonase precursor [Zea mays]
gi|195650599|gb|ACG44767.1| polygalacturonase precursor [Zea mays]
Length = 416
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 152/382 (39%), Gaps = 92/382 (24%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
+L + DFGAV DGI +D++A +W A + K + VP GK Y + + GPC
Sbjct: 33 LLTLDDFGAVGDGIANDTQALLDAWGAACS-SNQKAVLAVPAGKVYQIWPVQLSGPCNKK 91
Query: 85 ISFQLQGL------------------LDLFSIDTSLSLAKGTFHGQGETAWPLN-QCHKN 125
I + G L ++ +D GT G G+ W + K
Sbjct: 92 IKLLISGAIVAPSSPDEWAGRDPMKWLYVYGVDGLSVSGGGTIDGMGQQWWASTCKRKKT 151
Query: 126 SDC---QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSS--- 179
C P + F + ++ G+ +++ F + C +K + L++ A ADS
Sbjct: 152 QPCYSGPRPKAVHFEECREVSVQGVTLQNAQQFQLTFTRCSCVKASFLRVVAPADSPNTD 211
Query: 180 ------------------------------KDILVSEVFCGPGQGISVGSLGKGIKDEEV 209
D+ V ++ CGPG GIS+GSLGK + V
Sbjct: 212 GIHLNDTSHVRITDNLISTGDDCVSMVGNCSDVRVKDISCGPGHGISIGSLGKNRTTDMV 271
Query: 210 VGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPY---- 265
+ V C T T+NGVR+K+W G A + FE+IVM NV NPI+IDQ YC
Sbjct: 272 EDVKVDTCLLTNTTNGVRIKSW-QGGTGFARDLRFENIVMKNVSNPIIIDQYYCDQPTPC 330
Query: 266 ------------------------NKCNIKPKDSMP--NIEIGNRNLVYNGVNVKVEGPE 299
+I D++P ++E+ N NL G G
Sbjct: 331 ANQTQAVEVRKVEFAGIRGTSATPQAISIACSDAVPCRDLELANVNLTLEGGG----GGR 386
Query: 300 TTSLCSNVKPTLFGKQIPATCV 321
T+LC G +P +C+
Sbjct: 387 ATALCYRASGKSAGTVVPPSCL 408
>gi|356531615|ref|XP_003534372.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 441
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 134/297 (45%), Gaps = 62/297 (20%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK--YLVSFAEFEGPCKAS 84
++V DFGA ADG DDS+AF +W EA + +G +LV P Y + F GPC+ +
Sbjct: 73 VSVDDFGAKADG-RDDSEAFGKAWNEACS----RGAILVVPENKIYRLKPITFSGPCRPN 127
Query: 85 ISFQLQGLLD----------------LFSIDTSLSLAKGTFHGQGETAWPLNQC-----H 123
+F L G ++ +F ++ + G W + C H
Sbjct: 128 TAFMLYGTIEAWTQMSAYQEDRQHWIVFDRVSNFRVGGGGTFNGKGKKWWQSSCKVNTNH 187
Query: 124 KNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----- 178
+ +D P + F N+ +T ++ D+ H+ GC+N+ +++L I A DS
Sbjct: 188 QCNDGPRPKAVTFYQCNNLKVTNLRFKDAPQMHVTFEGCFNVIVSNLVIRAPGDSPNTDG 247
Query: 179 ----------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVV 210
S+++ +++ CGPG GIS+GSLG + EV
Sbjct: 248 IHVADTQNIVISNTDIGTGDDCISIISGSQNVRATDITCGPGHGISIGSLGADNSEAEVS 307
Query: 211 GLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
+ V T T+NGVR+KTW G A N F +I M NV NPI++DQ YC K
Sbjct: 308 NVVVNRATLIGTANGVRIKTWQGGS-GYARNIKFLNIAMQNVTNPIIVDQYYCDQAK 363
>gi|125599503|gb|EAZ39079.1| hypothetical protein OsJ_23511 [Oryza sativa Japonica Group]
Length = 393
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 146/319 (45%), Gaps = 61/319 (19%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK 60
L+++A L F+ S D + V +++ +GA DG DD+KA +W A +
Sbjct: 6 LIVSASLLALFFFLHSADA-DVGSNVFSIQSYGAHGDGRHDDTKALGDTWAAACS-SAKP 63
Query: 61 GTVLVPPG-KYLVSFAEFEGPCKASISFQLQGLLDLFSIDTSLSLAKGTFH--------- 110
+L+P G KYL+ GPCK+SIS ++G L + S + S + H
Sbjct: 64 AVLLIPKGKKYLIKHTTLSGPCKSSISLMVKGSL-VASPERSDWSKETIRHWILISGVTG 122
Query: 111 ----------GQGETAWPLNQCHKNSD---CQLPTPIRFNFLNDSTITGIKSVDSRYFHI 157
G G+ W N C NS + PT + F + + +K V+S+ I
Sbjct: 123 LTVTGGGTIDGNGKIWWQ-NSCKTNSKLPCTEAPTALTFYSCKNLKVEYLKVVNSQQIQI 181
Query: 158 NILGCYNLKLNDLKITA----------HADSSKDILVSE--------------------- 186
++ C ++ ++ L ITA H S+D+ V++
Sbjct: 182 SVEDCTDVMVSRLSITAPETAPNTDGIHITRSRDVEVTDCMIKTGDDCMSIEDGTENLHV 241
Query: 187 --VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTF 244
+ CGPG GIS+GSLG + V +TV N T+NG R+KTW G A N F
Sbjct: 242 KNMVCGPGHGISIGSLGDHNSEAHVNNVTVDNVRLYGTANGARIKTWQGGK-GSAKNIVF 300
Query: 245 EDIVMNNVENPIVIDQLYC 263
+++VM+NV NPI+IDQ YC
Sbjct: 301 QNMVMDNVWNPIIIDQNYC 319
>gi|357127466|ref|XP_003565401.1| PREDICTED: probable polygalacturonase At3g15720-like [Brachypodium
distachyon]
Length = 430
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 130/294 (44%), Gaps = 55/294 (18%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKASIS 86
+V DF A DG TDD+ AF +W+ A + DG +++P G+ +L+S F+G CK+ I+
Sbjct: 64 SVLDFHAAGDGKTDDAPAFLEAWQAACS-DGSSPILVIPGGRTFLLSKIRFQGSCKSPIT 122
Query: 87 FQLQG---------------LLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDC-QL 130
QL G LL + ID G G+G W C+ C
Sbjct: 123 VQLDGNIVAPNYIWTAESDNLLTFYRIDNLTVAGNGQIDGRGAIWW---TCYNQKRCTHR 179
Query: 131 PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----------SK 180
P + F N+ + I DS H+ + C + ++ + +TA ADS S
Sbjct: 180 PILLAFASCNNLWVRNIHLKDSPDKHMTLFRCSQVHVDSVSVTAPADSPNTDGINMGNSD 239
Query: 181 DILVSE-----------------------VFCGPGQGISVGSLGKGIKDEEVVGLTVRNC 217
+ +S CGPG GISVGSLG V +TV NC
Sbjct: 240 HVYISSCSFQTGDDCVSILSGTTDVNVTNTTCGPGHGISVGSLGGANVIALVERITVSNC 299
Query: 218 TFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK 271
+F T GVR+K+W +G A+ F FE++ M V PI IDQ YCP C K
Sbjct: 300 SFVGTLTGVRIKSW-QGGMGKANGFLFENLKMTAVRIPIDIDQFYCPQGNCPTK 352
>gi|413943904|gb|AFW76553.1| hypothetical protein ZEAMMB73_007553 [Zea mays]
Length = 317
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 111/215 (51%), Gaps = 39/215 (18%)
Query: 92 LLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSV 150
LL +D + KGT GQG+ W N+C K DC+ LP + +F+N+ T++GI +
Sbjct: 32 LLRAVHVDNLVITGKGTLDGQGKEVWDNNKCAKKYDCKILPNSLVLDFVNNGTVSGITLL 91
Query: 151 DSRYFHINILGCYNLKLNDLKITAHADS-------------------------------- 178
++++FH+N+ C ++ + D+ ITA DS
Sbjct: 92 NAKFFHMNVFQCKDMTIKDVTITAPEDSPNTDGIHIGDSSEVTISGTTIGTGDDCISIGP 151
Query: 179 -SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPD-SHI 236
S I ++ V CGPG VGSLG+ +++V + V++CT TSNGVR+K + D + +
Sbjct: 152 GSSGINITGVTCGPG----VGSLGRYKDEKDVTDVNVKDCTLKKTSNGVRIKAYEDAASV 207
Query: 237 GIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK 271
AS +E+I M +V NP++ID YCP C K
Sbjct: 208 LTASKLHYENIAMEDVANPVIIDMKYCPNKICTAK 242
>gi|28411800|dbj|BAC57275.1| putative polygalacturonase precursor [Oryza sativa Japonica Group]
Length = 405
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 146/318 (45%), Gaps = 59/318 (18%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK 60
L+++A L F+ S D + V +++ +GA DG DD+KA +W A +
Sbjct: 6 LIVSASLLALFFFLHSADA-DVGSNVFSIQSYGAHGDGRHDDTKALGDTWAAACS-SAKP 63
Query: 61 GTVLVPPG-KYLVSFAEFEGPCKASISFQLQGLL------DLFSIDT------------S 101
+L+P G KYL+ GPCK+SIS ++G L +S +T
Sbjct: 64 AVLLIPKGKKYLIKHTTLSGPCKSSISLMVKGSLVASPERSDWSKETIRHWILISGVTGL 123
Query: 102 LSLAKGTFHGQGETAWPLNQCHKNSD---CQLPTPIRFNFLNDSTITGIKSVDSRYFHIN 158
GT G G+ W N C NS + PT + F + + +K V+S+ I+
Sbjct: 124 TVTGGGTIDGNGKIWWQ-NSCKTNSKLPCTEAPTALTFYSCKNLKVEYLKVVNSQQIQIS 182
Query: 159 ILGCYNLKLNDLKITA----------HADSSKDILVSE---------------------- 186
+ C ++ ++ L ITA H S+D+ V++
Sbjct: 183 VEDCTDVMVSRLSITAPETAPNTDGIHITRSRDVEVTDCMIKTGDDCMSIEDGTENLHVK 242
Query: 187 -VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFE 245
+ CGPG GIS+GSLG + V +TV N T+NG R+KTW G A N F+
Sbjct: 243 NMVCGPGHGISIGSLGDHNSEAHVNNVTVDNVRLYGTANGARIKTWQGGK-GSAKNIVFQ 301
Query: 246 DIVMNNVENPIVIDQLYC 263
++VM+NV NPI+IDQ YC
Sbjct: 302 NMVMDNVWNPIIIDQNYC 319
>gi|225450100|ref|XP_002274775.1| PREDICTED: polygalacturonase-like [Vitis vinifera]
Length = 449
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 138/291 (47%), Gaps = 58/291 (19%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKAS-I 85
+NV D+GA DGITDD++AF +W+E + + G ++VP KY + F GPCK+ +
Sbjct: 80 VNVDDYGAEGDGITDDTEAFKKAWKETCSSN--VGVLVVPEKKYRLKPITFSGPCKSDFV 137
Query: 86 SFQLQGLLD----------------LFS-IDTSLSLAKGTFHGQGETAWPLNQC--HKNS 126
++ G++ LF+ I + +GT G G+ W N C +K
Sbjct: 138 MLKILGMIVASNDRSDYAKDRRHWLLFNNIKNFIVEGQGTIDGNGKIWWK-NSCKINKTQ 196
Query: 127 DCQL-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------- 178
C + PT + F + + G+ +++ H+ +++ ++ +TA DS
Sbjct: 197 PCTVAPTAVTFRRCENLRVCGLNIKNAQQMHVRFEQSVDVQAFNVMLTAPEDSPNTDGIH 256
Query: 179 --------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGL 212
SK++ +V CGPG GIS+GSLG+G + V +
Sbjct: 257 VTGSQNVQIISSVIRTGDDCISIVNGSKNVQALDVTCGPGHGISIGSLGEGNSEAFVSNV 316
Query: 213 TVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
V T+NGVR+KTW G A N F++I+M NV NPI+IDQ YC
Sbjct: 317 MVNKAKLIGTTNGVRIKTWQGGS-GYAKNIVFQNIIMENVSNPIIIDQNYC 366
>gi|357114979|ref|XP_003559271.1| PREDICTED: polygalacturonase-like [Brachypodium distachyon]
Length = 403
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 174/399 (43%), Gaps = 93/399 (23%)
Query: 8 SLLVSFITSVRGIDATNRVL--NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLV 65
+L+V F+ S + N + ++ ++GA DG DD++A +W A + +LV
Sbjct: 8 ALIVLFLLSRSNASSVNTSVEFSIDNYGARGDGKHDDTEALAKAWTAACS-SSRPAVLLV 66
Query: 66 PPGK-YLVSFAEFEGPCKASISFQLQGLLD------------------LFSIDTSLSLAK 106
P GK YL+ GPCK+++ F ++G L L I+ L++
Sbjct: 67 PKGKTYLLKSITLSGPCKSNLVFMVKGTLAAPRSLSDWSEENRRHWIVLHGIN-GLTVTG 125
Query: 107 GTFHGQGETAWPLNQCHKNSD--C-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCY 163
G W N C N C Q PT + F+ ++ T+ +K V+S+ ++++ C
Sbjct: 126 GGTINGNGELWWKNSCKTNKARPCKQAPTALTFHLCSNLTVENLKIVNSQQINMSVEDCS 185
Query: 164 NLKLNDLKITA----------HADSSKDIL-----------------------VSEVFCG 190
+++L L ITA H SKD+ V++V CG
Sbjct: 186 DVQLARLSITAPGTSPNTDGIHITRSKDVQVRDCVIRTGDDCMSIEDGTHNLHVTKVVCG 245
Query: 191 PGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMN 250
PG GIS+GSLG EV G+ + T+NG R+KT+ G A + F++I+M+
Sbjct: 246 PGHGISIGSLGDDNSRAEVSGIYIDTVQLYGTTNGARIKTYQGGS-GYAKDIVFQNIIMD 304
Query: 251 NVENPIVIDQLYCPYNKCNIKP-KDSMPNIEIGN-------------------------- 283
NV+NPI+IDQ YC + KP K+ +EI N
Sbjct: 305 NVQNPIIIDQNYCD----SAKPCKNQESAVEISNVVFKNIRGTTMSKDAIKLDCSNSDSC 360
Query: 284 RNLVYNGVNVKVEG--PETTSLCSNVKPTLFGKQIPATC 320
++V +++K+EG ET S C N K G P C
Sbjct: 361 TDIVLENIDLKMEGGNGETQSTCQNAKWRKSGNVTPQPC 399
>gi|47606004|sp|Q7M1E7.1|PGLR2_CHAOB RecName: Full=Polygalacturonase; Short=PG; AltName: Full=Major
pollen allergen Cha o 2; AltName: Full=Pectinase;
AltName: Allergen=Cha o 2; Flags: Precursor
Length = 514
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 133/294 (45%), Gaps = 60/294 (20%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGPCKAS 84
V NV+ +GAV DG D ++AF T+W A +LVP K+ V+ F GPC+
Sbjct: 58 VFNVEQYGAVGDGKHDSTEAFATTWNAACK--KASAVLLVPANKKFFVNNLVFRGPCQPH 115
Query: 85 ISFQLQGLLDL---------------FSIDTSLSL-AKGTFHGQGETAWPLNQCH----- 123
+SF++ G + F+ T +L G GQG+ W QC
Sbjct: 116 LSFKVDGTIVAQPDPARWKNSKIWLQFAQLTDFNLMGTGVIDGQGQQWW-AGQCKVVNGR 174
Query: 124 -KNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---- 178
+D PT I+ ++ T+ + ++S FH+ C +K+ LKI A DS
Sbjct: 175 TVCNDRNRPTAIKIDYSKSVTVKELTLMNSPEFHLVFGECEGVKIQGLKIKAPRDSPNTD 234
Query: 179 -----------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEV 209
S +I + ++ CGPG GIS+GSLG+ EV
Sbjct: 235 GIDIFASKRFHIEKCVIGTGDDCIAIGTGSSNITIKDLICGPGHGISIGSLGRDNSRAEV 294
Query: 210 VGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
+ V F T NG+R+KTW G+AS T+E++ M N ENPI+I+Q YC
Sbjct: 295 SHVHVNRAKFIDTQNGLRIKTWQGGS-GLASYITYENVEMINSENPILINQFYC 347
>gi|297736266|emb|CBI24904.3| unnamed protein product [Vitis vinifera]
Length = 456
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 138/291 (47%), Gaps = 58/291 (19%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKAS-I 85
+NV D+GA DGITDD++AF +W+E + + G ++VP KY + F GPCK+ +
Sbjct: 87 VNVDDYGAEGDGITDDTEAFKKAWKETCSSN--VGVLVVPEKKYRLKPITFSGPCKSDFV 144
Query: 86 SFQLQGLLD----------------LFS-IDTSLSLAKGTFHGQGETAWPLNQC--HKNS 126
++ G++ LF+ I + +GT G G+ W N C +K
Sbjct: 145 MLKILGMIVASNDRSDYAKDRRHWLLFNNIKNFIVEGQGTIDGNGKIWWK-NSCKINKTQ 203
Query: 127 DCQL-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------- 178
C + PT + F + + G+ +++ H+ +++ ++ +TA DS
Sbjct: 204 PCTVAPTAVTFRRCENLRVCGLNIKNAQQMHVRFEQSVDVQAFNVMLTAPEDSPNTDGIH 263
Query: 179 --------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGL 212
SK++ +V CGPG GIS+GSLG+G + V +
Sbjct: 264 VTGSQNVQIISSVIRTGDDCISIVNGSKNVQALDVTCGPGHGISIGSLGEGNSEAFVSNV 323
Query: 213 TVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
V T+NGVR+KTW G A N F++I+M NV NPI+IDQ YC
Sbjct: 324 MVNKAKLIGTTNGVRIKTWQGGS-GYAKNIVFQNIIMENVSNPIIIDQNYC 373
>gi|145332593|ref|NP_001078162.1| polygalacturonase [Arabidopsis thaliana]
gi|332642198|gb|AEE75719.1| polygalacturonase [Arabidopsis thaliana]
Length = 452
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 144/307 (46%), Gaps = 63/307 (20%)
Query: 20 IDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFE 78
I ++ L+V FGAV DG+TDDS+AF +W + G G +VP G +++ +F+
Sbjct: 16 IFTSSNALDVTQFGAVGDGVTDDSQAFLKAWEAVCSGTG-DGQFVVPAGMTFMLQPLKFQ 74
Query: 79 GPCKASISF-QLQGLLD---------------LFS-IDTSLSLAKGTFHGQGETAWPLNQ 121
G CK++ F Q+ G L LF+ I+ + G +GQG + W
Sbjct: 75 GSCKSTPVFVQMLGKLVAPSKGNWKGDKDQWILFTDIEGLVIEGDGEINGQGSSWWE--- 131
Query: 122 CHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--- 178
HK S PT F N+ ++G+ +DS HI+I C + ++ L+I A S
Sbjct: 132 -HKGSR---PT---FRSCNNLRLSGLTHLDSPMAHIHISECNYVTISSLRINAPESSPNT 184
Query: 179 ------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEE 208
+ +I +S + CGPG GIS+GSLGK +
Sbjct: 185 DGIDVGASSNVVIQDCIIATGDDCIAINSGTSNIHISGIDCGPGHGISIGSLGKDGETAT 244
Query: 209 VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
V + V+NC F T NG R+KTW G A TF I ++NVENPI+IDQ Y +
Sbjct: 245 VENVCVQNCNFRGTMNGARIKTWQGGS-GYARMITFNGITLDNVENPIIIDQFYNGGDSD 303
Query: 269 NIKPKDS 275
N K + S
Sbjct: 304 NAKDRKS 310
>gi|28411804|dbj|BAC57279.1| putative polygalacturonase PG1 [Oryza sativa Japonica Group]
gi|50509106|dbj|BAD30173.1| putative polygalacturonase PG1 [Oryza sativa Japonica Group]
gi|222636649|gb|EEE66781.1| hypothetical protein OsJ_23515 [Oryza sativa Japonica Group]
Length = 429
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 143/306 (46%), Gaps = 61/306 (19%)
Query: 16 SVRG---IDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YL 71
S+RG +++ V +V+ G+ DG DD+KA +W A + VLVP GK YL
Sbjct: 39 SLRGKSSLESKKAVFDVRKHGSYGDGQHDDTKALSKAWAAACS-SLQPSIVLVPKGKRYL 97
Query: 72 VSFAEFEGPCKASISFQLQGLLD-----------------LFSIDTSLSLAKG-TFHGQG 113
GPCK+SI+F ++G L +F+ L++A G T G G
Sbjct: 98 TKHITLSGPCKSSITFMIEGTLVAPPKRSDWSKETIRHWIMFNGVIGLTVAGGGTVDGNG 157
Query: 114 ETAWPLNQCHKNSD---CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
+ W N C N+ + PT + F ++ + +K ++S+ H+++ C N++++ L
Sbjct: 158 KIWWQ-NSCKTNAKLACTESPTALTFYSCSNLKVENLKLLNSQQIHMSVEDCTNVRISGL 216
Query: 171 KITA----------HADSSKDILVS-----------------------EVFCGPGQGISV 197
ITA H SK++ V+ + CGPG GIS+
Sbjct: 217 TITAPGTSPNTDGIHITRSKNVQVTGCTIKTGDDCMSIEDGTENLHVKNMVCGPGHGISI 276
Query: 198 GSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIV 257
GSLG + V +T+ T+NG R+KTW G A F++++M NV NP++
Sbjct: 277 GSLGDHNSEAHVNNVTIGTVRLYGTTNGARIKTWQGGR-GYAKYIVFQNMIMENVWNPVI 335
Query: 258 IDQLYC 263
IDQ YC
Sbjct: 336 IDQNYC 341
>gi|47606048|sp|Q9FY19.1|PGLR2_JUNAS RecName: Full=Polygalacturonase; Short=PG; AltName: Full=Major
pollen allergen Jun a 2; AltName: Full=Pectinase;
AltName: Allergen=Jun a 2; Flags: Precursor
gi|9955725|emb|CAC05582.1| pollen major allergen 2 protein [Juniperus ashei]
Length = 507
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 132/294 (44%), Gaps = 60/294 (20%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGPCKAS 84
V NV+ +GAV DG D + AF+ +W A N + LVP K++V+ F GPC+
Sbjct: 59 VFNVEHYGAVGDGKHDSTDAFEKTWNAACN--KLSAVFLVPANKKFVVNNLVFYGPCQPH 116
Query: 85 ISFQLQGLLDLFSIDTSLSLAK----------------GTFHGQGETAWPLNQCHK---- 124
SF++ G + + +K G GQG W +QC
Sbjct: 117 FSFKVDGTIAAYPDPAKWKNSKIWMHFARLTDFNLMGTGVIDGQGNRWWS-DQCKTINGR 175
Query: 125 --NSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---- 178
+D PT I+ +F T+ + +S FH+ C +K+ +KI A DS
Sbjct: 176 TVCNDKGRPTAIKIDFSKSVTVKELTLTNSPEFHLVFGECDGVKIQGIKIKAPRDSPNTD 235
Query: 179 -----------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEV 209
S +I + ++ CGPG G+S+GSLGKG EV
Sbjct: 236 GIDIFASKRFEIEKCTIGTGDDCVAVGTGSSNITIKDLTCGPGHGMSIGSLGKGNSRSEV 295
Query: 210 VGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
+ + F T NG+R+KTW G+AS+ T+E++ M N ENPI+I+Q YC
Sbjct: 296 SFVHLDGAKFIDTQNGLRIKTWQGGS-GLASHITYENVEMINAENPILINQFYC 348
>gi|224143124|ref|XP_002324855.1| predicted protein [Populus trichocarpa]
gi|222866289|gb|EEF03420.1| predicted protein [Populus trichocarpa]
Length = 399
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 140/313 (44%), Gaps = 62/313 (19%)
Query: 7 FSLLVSFIT-SVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGT--V 63
FS L+ I S GI +V NV DFGA+ DG DD+ AF ++W+ D +GT +
Sbjct: 6 FSFLILCIAASSFGIGHGQKVFNVVDFGAIGDGQIDDTNAFLSAWQALCGDDVAQGTPSL 65
Query: 64 LVPPGK-YLVSFAEFEGPCKAS-ISFQLQG------------------LLDLFSIDTSLS 103
+P GK +L+ +F+GPCK+ + Q+QG + +
Sbjct: 66 QIPEGKTFLLQPVKFQGPCKSVFVHVQVQGKIIAPNTIEEWNNCQADYWIGFVGVANLNM 125
Query: 104 LAKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCY 163
G GQG + W + NS + F +D ++G+ VDS HI I C
Sbjct: 126 YGSGLIDGQG-SVWWMRAMQANS----LNALNFEKCDDLQLSGLTHVDSPKGHIGITDCN 180
Query: 164 NLKLNDLKITAHADSSKD---------------------------------ILVSEVFCG 190
+ +++L I A +S I ++ + CG
Sbjct: 181 GVLISNLNIAAPENSPNTDGIDMARSTNVHIQDSMIATGDDCVAINGGCSYINITNIACG 240
Query: 191 PGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMN 250
PG GISVGSLGK + + V + VRNC+FT T N R+KTW G A ++E I +
Sbjct: 241 PGHGISVGSLGKDGQYDTVEEVHVRNCSFTGTQNAARIKTWQGGS-GYARKISYEQITLV 299
Query: 251 NVENPIVIDQLYC 263
+NPI+IDQ YC
Sbjct: 300 ASKNPIIIDQYYC 312
>gi|118197961|gb|ABK78769.1| putative allergen Cup a 2 variant 2 [Hesperocyparis arizonica]
Length = 381
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 136/294 (46%), Gaps = 60/294 (20%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGPCKAS 84
V NV+ +GAV DG D + AF+ +W EA + LVP K++V+ F GPC+
Sbjct: 6 VFNVEHYGAVGDGNHDSTDAFEKTWNEACK--TLSAVFLVPANKKFVVNNLVFYGPCQPH 63
Query: 85 ISFQLQGLLDL---------------FSIDTSLSL-AKGTFHGQGETAWPLNQCHK---- 124
SF++ G++ F+ T +L G GQG W +QC
Sbjct: 64 FSFKVDGIIAAYPDPVKWKNSKIWMHFARLTDFNLMGTGVIDGQGSKWWS-DQCKTVNGR 122
Query: 125 --NSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---- 178
+D PT I+ +F T+ + ++S FH+ C +K+ +KI A +S
Sbjct: 123 TVCNDKGRPTAIKIDFSKSVTVKELTLMNSPEFHLVFGECDGVKIQGIKIKAPKESPNTD 182
Query: 179 -----------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEV 209
S +I + ++ CGPG G+S+GSLGKG EV
Sbjct: 183 GIDIFGSKRFEIEKCTIGTGDDCVAIGTGSSNITIKDLTCGPGHGMSIGSLGKGNSRSEV 242
Query: 210 VGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
+ + F T NG+R+KTW G+AS+ T+E++ M N ENPI+I+Q YC
Sbjct: 243 SFVHLDGAKFIDTQNGLRIKTWQGGS-GLASHITYENVEMVNAENPILINQFYC 295
>gi|115451573|ref|NP_001049387.1| Os03g0216800 [Oryza sativa Japonica Group]
gi|108706858|gb|ABF94653.1| Polygalacturonase precursor, putative, expressed [Oryza sativa
Japonica Group]
gi|113547858|dbj|BAF11301.1| Os03g0216800 [Oryza sativa Japonica Group]
gi|215740623|dbj|BAG97279.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 438
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 133/294 (45%), Gaps = 57/294 (19%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKA 83
RV++V D+ A AD D ++AF +W+EA N +LVP GK YL+ F GPC+A
Sbjct: 64 RVVDVDDYRARADA-GDHTEAFLQAWKEACNSSDYPSVLLVPEGKTYLLMPVSFNGPCRA 122
Query: 84 S-ISFQLQGLLDL-----------------FSIDTSLSLAKGTFHGQGETAWPLNQCHKN 125
+ I+ ++G L+ F L + G W +N C N
Sbjct: 123 TTITATIRGTLEAPSNRSVWLDRDLQEWITFDNIDHLRVLGGGTLNGNGHQWWINSCKTN 182
Query: 126 SDCQL---PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA-------- 174
+ PT + F N + G++ DS H+ I + + ++ L ITA
Sbjct: 183 RSMRCVTGPTALYFRRCNHLVVEGLQIRDSMQMHVVIAYSWRVLVSRLLITAPGWSPNTD 242
Query: 175 --HADSSKDILVSE-----------------------VFCGPGQGISVGSLGKGIKDEEV 209
H +S+++L+S +FCGPG GIS+GSLG V
Sbjct: 243 GIHVSNSREVLMSGCIISTGDDCISIVTGSMFIRATGIFCGPGHGISIGSLGANKSWAHV 302
Query: 210 VGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
+ V T T+NGVR+KTW G A TF+DI M+NV NP++IDQ YC
Sbjct: 303 SDVLVEKATLVGTTNGVRIKTWQGGD-GHAERITFQDITMHNVTNPVIIDQNYC 355
>gi|255542994|ref|XP_002512560.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223548521|gb|EEF50012.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 470
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 131/307 (42%), Gaps = 65/307 (21%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKY--LVSFAEFEGPCK 82
RV NV FGAV DG +DD++AF +W A + + + ++L+ P +Y L+ F GPCK
Sbjct: 73 RVFNVLSFGAVGDGASDDTQAFKMAWDSACSQN--ESSILLAPSRYSFLIQPTIFTGPCK 130
Query: 83 ASISFQLQGL-------------------LDLFSIDTSLSLAKGTFHGQGETAWPL---- 119
+++ FQ+ G L + I G G+GE W L
Sbjct: 131 SNLVFQIDGTIMPPDGPKSWPRNMSKRQWLVFYRISGMSVQGGGVIDGRGEKWWNLPCKP 190
Query: 120 ----NQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA- 174
N C P +RF ++ T+ G+K +S FH C N+ + L I A
Sbjct: 191 HKGFNGATSAGPCDSPVALRFFMSSNLTVQGLKVKNSPQFHFRFDNCQNVHIEMLNIKAP 250
Query: 175 ---------HADSSKDILVSE-----------------------VFCGPGQGISVGSLGK 202
H +++ D+ + + CGP GIS+GSLG
Sbjct: 251 ALSPNTDGIHIENTNDVHIHNSVVSNGDDCVSIGAGCHNVDIRNITCGPSHGISIGSLGI 310
Query: 203 GIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLY 262
V +TV + + NGVR+KTW + G S F +I M+ V NPI+IDQ Y
Sbjct: 311 HNSRACVSNITVTDSVIKYSDNGVRIKTWQGGY-GSVSKVAFHNIHMDTVRNPIIIDQYY 369
Query: 263 CPYNKCN 269
C C+
Sbjct: 370 CLTKNCS 376
>gi|356555964|ref|XP_003546298.1| PREDICTED: polygalacturonase At1g48100-like isoform 2 [Glycine max]
Length = 483
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 132/308 (42%), Gaps = 68/308 (22%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
+ +V+ FGAV DG DD+ AF +W+EA + G VLVP + ++ F GPCK
Sbjct: 82 IFDVRSFGAVGDGSADDTDAFVAAWKEACAVE--SGVVLVPEDYCFKITSTIFTGPCKPG 139
Query: 85 ISFQLQGLLD-------------------LFSIDTSLSLAKGTFHGQGETAWPL------ 119
+ FQ+ G L + +D KGT G GE W L
Sbjct: 140 LVFQVDGTLMAPDGPECWPKEDSHSQWLVFYRLDQMTLTGKGTIEGNGEQWWDLPCKPHR 199
Query: 120 ------NQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKIT 173
+ + C PT IRF ++ ++G+K +S FH+ GC + ++ L I+
Sbjct: 200 VINHFTKHIYVSGPCDSPTMIRFFMSSNLVLSGVKIQNSPMFHVKFDGCQGVLIDKLSIS 259
Query: 174 A----------HADSSK-----------------------DILVSEVFCGPGQGISVGSL 200
+ H +++ D+ + V C P GIS+GSL
Sbjct: 260 SPKLSPNTDGIHLGNTRGVGIYNSMISNGDDCISIGPGCSDVDIEGVTCAPTHGISIGSL 319
Query: 201 GKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQ 260
G V LTVRN + NG+R+KTW G + FE+I M NV N I+IDQ
Sbjct: 320 GVHNSQACVSNLTVRNTIIKESDNGLRIKTW-QGGTGSVTGLRFENIQMENVRNCIIIDQ 378
Query: 261 LYCPYNKC 268
YC +C
Sbjct: 379 YYCMSKEC 386
>gi|2335094|gb|AAC02763.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 426
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/320 (30%), Positives = 153/320 (47%), Gaps = 63/320 (19%)
Query: 3 LAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGT 62
L R + + VR T ++V DFGA DG TDD++AF +W++A + +G
Sbjct: 44 LIKRREDITGLRSFVRASLRTPTTVSVSDFGAKGDGKTDDTQAFVNAWKKACSSNGAV-N 102
Query: 63 VLVPPGK-YLVSFAEFEGPCKASISFQLQGLLD---------------LFSIDTSLSL-- 104
+LVP G YL+ + GPC + ++ Q+ G L +F +LS+
Sbjct: 103 LLVPKGNTYLLKSIQLTGPCNSILTVQIFGTLSASQKRSDYKDISKWIMFDGVNNLSVDG 162
Query: 105 -AKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDST--ITGIKSVDSRYFHINILG 161
G G GET W N C +N L F N + + +K +++ I+I
Sbjct: 163 GDTGVVDGNGETWWQ-NSCKRNKAKALT------FYNSKSLIVKNLKVRNAQQIQISIEK 215
Query: 162 CYNLKLNDLKITAHADS---------------------------------SKDILVSEVF 188
C N++++++ +TA ADS S+++ ++++
Sbjct: 216 CSNVQVSNVVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESGSQNVQINDIT 275
Query: 189 CGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIV 248
CGPG GIS+GSLG V G+TV + T NGVR+KT+ G ASN F++I
Sbjct: 276 CGPGHGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGS-GTASNIIFQNIQ 334
Query: 249 MNNVENPIVIDQLYCPYNKC 268
M+NV+NPI+IDQ YC +KC
Sbjct: 335 MDNVKNPIIIDQDYCDKSKC 354
>gi|449436389|ref|XP_004135975.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
gi|449488764|ref|XP_004158164.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
Length = 467
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 147/352 (41%), Gaps = 69/352 (19%)
Query: 20 IDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFE 78
I+ TN + +V+ FGA+ DGI DD++AF +W A + +LVP G +++ F
Sbjct: 64 INDTN-IFDVRAFGAIGDGIVDDTEAFKMAWDTACQSEDDSVVMLVPYGFSFMIQSTIFT 122
Query: 79 GPCKASISFQLQGLLD-------------------LFSIDTSLSLAKGTFHGQGETAWPL 119
GPC + ++ G L + ID G G+G+ W L
Sbjct: 123 GPCHGYLMLRVDGTLMTPDGPDAWPKNASRRQWLVFYRIDGMSLEGGGVIDGRGQKWWDL 182
Query: 120 N-QCHKNSD-------CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLK 171
+ HK + C P IRF ++ T+ G+K +S FH GC + ++ +
Sbjct: 183 PCKPHKGPNGTTLPGPCDSPIAIRFFMSSNLTVHGLKITNSPQFHFRFDGCKTVHIDSIH 242
Query: 172 ITAHADS---------------------------------SKDILVSEVFCGPGQGISVG 198
I + S S D+ + + CGP GIS+G
Sbjct: 243 IKSPGLSPNTDGIHIENTNGVQIYNSVINNGDDCVSIGSGSYDLDIRNITCGPSHGISIG 302
Query: 199 SLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVI 258
SLG V +TVR+ + NGVR+KTW + G TF +I M+NV NPI+I
Sbjct: 303 SLGVRNSRACVTNITVRDSVIKDSDNGVRIKTWQGGY-GAVRGITFSNIHMDNVRNPIII 361
Query: 259 DQLYCPYNKC-NIKPKDSMPNIEIGNRNLVYNGVNVKVEGPETTSLCSNVKP 309
DQ YC C N S+ +I+ N Y+ + P CS+ P
Sbjct: 362 DQFYCLTKDCTNQTSAVSVSDIQYTNIKGTYD-----IRSPPMHFACSDSVP 408
>gi|147839923|emb|CAN61695.1| hypothetical protein VITISV_029441 [Vitis vinifera]
Length = 1581
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 135/295 (45%), Gaps = 58/295 (19%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS-I 85
NV ++GAV +G TDDS+AF +WR+ V +P GK +L+ +F GPCK S I
Sbjct: 18 NVMNYGAVGNGATDDSQAFMRAWRDICAGKSYPNLV-IPGGKTFLLRPVQFYGPCKPSKI 76
Query: 86 SFQLQG------LLD-----------LFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDC 128
++ G L D + ++ G +G+G W Q + +
Sbjct: 77 YVEVYGRIVAPKLYDYGSNNLNCWIGFWHVNGLTVKGNGQINGRGAEWW---QAYTSGKI 133
Query: 129 -QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA------------- 174
Q PT + F N+ + G+ ++S+ HI++ G + ++ L ITA
Sbjct: 134 YQRPTAMGFYSCNNLLLQGLNFINSQRNHISVSGSNGVTISHLTITAPDSSPNTDGIDIS 193
Query: 175 --------------------HADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTV 214
D + + V V CGPG GIS+GSLG G +V + V
Sbjct: 194 HSKNVRVSDSTIGTGDDCIAFGDQTSQVFVKGVACGPGHGISIGSLGVGGASAQVEEIHV 253
Query: 215 RNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCN 269
+C+F T NG R+KTW G A TF +I + + ENPI+IDQ YCP++ C
Sbjct: 254 DSCSFKGTQNGARIKTWQGGS-GYARKITFNNIKLEDAENPIIIDQYYCPHSVCQ 307
>gi|399764468|gb|AFP50434.1| polygalacturonase 3, partial [Medicago carstiensis]
Length = 173
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 89/167 (53%), Gaps = 34/167 (20%)
Query: 136 FNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----------------- 178
FNFL S + I S DS+ FH+N+LGC N + ITA S
Sbjct: 4 FNFLKHSIVRDITSKDSKNFHVNVLGCTNFTFDGFTITAPXKSINTDGIHIGRSTDVKVL 63
Query: 179 ----------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCT 222
S+ I V V CGPG GISVGSLGK K+E V + V+NCT + T
Sbjct: 64 NTNIATGDDCISLGQGSRQITVQNVNCGPGHGISVGSLGKNPKEEAVEHVLVKNCTISNT 123
Query: 223 SNGVRVKTWPDS-HIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
NG+R+KTWP S ++ FEDI+M NV NP++IDQ YCP+N+C
Sbjct: 124 DNGLRIKTWPSSPGTSPITDMHFEDIIMVNVLNPVIIDQEYCPWNQC 170
>gi|226501180|ref|NP_001148771.1| polygalacturonase precursor [Zea mays]
gi|195622048|gb|ACG32854.1| polygalacturonase precursor [Zea mays]
Length = 541
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 139/309 (44%), Gaps = 71/309 (22%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKG--TVLVPPG-KYLVSFAEFEGP-C 81
V NV DFGA DG+TDD+KAF+ +W A KG TVLVPP ++LV F GP C
Sbjct: 142 VFNVVDFGAKGDGVTDDTKAFEGAWAAACK----KGACTVLVPPELEFLVGPISFSGPYC 197
Query: 82 KASISFQLQGL-----------------LDLFSIDTSLSLAKGTFHGQGETAWPLNQCHK 124
K++I FQL+G L+ ++ + G +G+G+ W +
Sbjct: 198 KSNIVFQLEGTILAPTSAKSWGSGLLQWLEFTKLNGMVIQGNGIINGRGQQWWTYSDTED 257
Query: 125 NSDCQL------------PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKI 172
D PT +RF + + GI V+S H+ C + ++DL I
Sbjct: 258 EDDDDTYDVEFERMPQIKPTALRFYGSFNVVVAGITIVNSSQCHLKFDNCQGVMVHDLTI 317
Query: 173 TA----------HADSSKDILVSE-----------------------VFCGPGQGISVGS 199
++ H +SKD+ + V CGPG GIS+G
Sbjct: 318 SSPENSLNTDGIHLQNSKDVSIHHTNLACGDDCISIQTGCSNINIHNVNCGPGHGISIGG 377
Query: 200 LGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVID 259
LG+ V +TVR+ T NGVR+KTW +G+ + F +I ++ V+ PI+ID
Sbjct: 378 LGRDNTKACVSNVTVRDVNMFRTMNGVRIKTW-QGGVGLVQDIRFSNIQVSEVQTPIIID 436
Query: 260 QLYCPYNKC 268
Q YC + C
Sbjct: 437 QFYCDRSTC 445
>gi|297744034|emb|CBI37004.3| unnamed protein product [Vitis vinifera]
Length = 484
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 132/307 (42%), Gaps = 63/307 (20%)
Query: 23 TNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGPC 81
+ V +V+ FGAV +GI DD++AF +W A + V VP G +++ F GPC
Sbjct: 85 STNVFDVRSFGAVGNGIADDTQAFKAAWDTACQVEE-SAIVFVPYGYSFMIQSTIFTGPC 143
Query: 82 KASISFQLQGLLD-------------------LFSIDTSLSLAKGTFHGQGETAWPLN-Q 121
++ + FQ+ G L + I+ G G+GE W L +
Sbjct: 144 QSRLVFQVDGTLTPPDGPDSWPQNNSKRQWLVFYRINEMSLQGGGLIDGRGENWWNLPCK 203
Query: 122 CHKNSD-------CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA 174
HK + C P IRF ++ T+ G++ +S F+ C ++ + + ITA
Sbjct: 204 PHKGINGTTLPGPCDSPIAIRFFMSSNLTVQGLRIKNSPQFNFRFDNCRDVHIESIYITA 263
Query: 175 HADSSK---------------------------------DILVSEVFCGPGQGISVGSLG 201
A S D+ + + CGP GIS+GSLG
Sbjct: 264 PALSPNTDGIHIENTNNVKIYNSVVSNGDDCVSIGSGCYDVDIKNITCGPSHGISIGSLG 323
Query: 202 KGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQL 261
V +TVR+ + NGVR+KTW G S TF ++ MNNV NPI+IDQ
Sbjct: 324 NHNSRACVSNITVRDSVLKYSDNGVRIKTWQGGS-GAVSGVTFSNLHMNNVRNPIIIDQF 382
Query: 262 YCPYNKC 268
YC +C
Sbjct: 383 YCLAKQC 389
>gi|224033293|gb|ACN35722.1| unknown [Zea mays]
gi|413950730|gb|AFW83379.1| polygalacturonase [Zea mays]
Length = 541
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 139/309 (44%), Gaps = 71/309 (22%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKG--TVLVPPG-KYLVSFAEFEGP-C 81
V NV DFGA DG+TDD+KAF+ +W A KG TVLVPP ++LV F GP C
Sbjct: 142 VFNVVDFGAKGDGVTDDTKAFEGAWAAACK----KGACTVLVPPELEFLVGPISFSGPYC 197
Query: 82 KASISFQLQGL-----------------LDLFSIDTSLSLAKGTFHGQGETAWPLNQCHK 124
K++I FQL+G L+ ++ + G +G+G+ W +
Sbjct: 198 KSNIVFQLEGTILAPTSAKSWGSGLLQWLEFTKLNGMVIQGNGIINGRGQQWWTYSDTED 257
Query: 125 NSDCQL------------PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKI 172
D PT +RF + + GI V+S H+ C + ++DL I
Sbjct: 258 EDDDDTYDVEFERMPQIKPTALRFYGSFNVVVAGITIVNSSQCHLKFDNCQGVMVHDLTI 317
Query: 173 TA----------HADSSKDILVSE-----------------------VFCGPGQGISVGS 199
++ H +SKD+ + V CGPG GIS+G
Sbjct: 318 SSPENSLNTDGIHLQNSKDVSIHHTNLACGDDCISIQTGCSNINIHNVNCGPGHGISIGG 377
Query: 200 LGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVID 259
LG+ V +TVR+ T NGVR+KTW +G+ + F +I ++ V+ PI+ID
Sbjct: 378 LGRDNTKACVSNVTVRDVNMFRTMNGVRIKTW-QGGVGLVQDIRFSNIQVSEVQTPIIID 436
Query: 260 QLYCPYNKC 268
Q YC + C
Sbjct: 437 QFYCDRSTC 445
>gi|296084985|emb|CBI28400.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/96 (60%), Positives = 72/96 (75%)
Query: 176 ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSH 235
D S+ I V +V CGPG GISVGSLGK +E VVG+TV+NCT T NG+RVKTWPDS
Sbjct: 24 GDGSQHINVEKVTCGPGHGISVGSLGKYHNEEPVVGVTVKNCTLINTMNGIRVKTWPDSP 83
Query: 236 IGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK 271
+A++ FEDI+MNNV NPI+I+Q YCPY++C K
Sbjct: 84 ASVATDLHFEDIIMNNVGNPILINQEYCPYDQCQAK 119
>gi|194708392|gb|ACF88280.1| unknown [Zea mays]
gi|223950129|gb|ACN29148.1| unknown [Zea mays]
gi|413946313|gb|AFW78962.1| polygalacturonase [Zea mays]
Length = 407
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 155/386 (40%), Gaps = 85/386 (22%)
Query: 18 RGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAE 76
RG +A +L + DFG V DGI +D++A +W A + + + VP GK Y + +
Sbjct: 22 RGAEA-RVLLTLDDFGGVGDGIANDTQALLDAWAAACS-STQEAVLAVPAGKVYQIWPVQ 79
Query: 77 FEGPCKASISFQLQGL------------------LDLFSIDTSLSLAKGTFHGQGETAWP 118
GPCK + + G L ++ +D GT G G+ W
Sbjct: 80 LSGPCKKRLKLLISGAIVAPSSPDEWAGRDPMKWLYVYGVDGLSVSGGGTIDGMGQQWWA 139
Query: 119 LN-QCHKNSDC---QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA 174
+ K C P + F + ++ G+ +++ F + C +K + L++ A
Sbjct: 140 STCKRKKTQPCYSGPRPKAVHFEECREVSVQGVTLQNAQQFQLTFTRCSCVKASFLRVVA 199
Query: 175 HADSS---------------------------------KDILVSEVFCGPGQGISVGSLG 201
ADS D+ V ++ CGPG GIS+GSLG
Sbjct: 200 PADSPNTDGIHLNDTSHVRITDNLISTGDDCVSMVGNCSDVRVKDISCGPGHGISIGSLG 259
Query: 202 KGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQL 261
K + V + V C T T+NGVR+K+W G A + FE+IVM NV NPI+IDQ
Sbjct: 260 KNRTTDMVEDVKVDTCLLTNTTNGVRIKSW-QGGTGFARDLRFENIVMRNVSNPIIIDQY 318
Query: 262 YC--PYNKCNIKPKDSMPNIEIGN---------------------RNLVYNGVNVKVEG- 297
YC P N + +E R+L VN+ +EG
Sbjct: 319 YCDQPTPCANQTQAVEVRRVEFAGIRGTSATPQAISIACSDAVPCRDLELANVNLTLEGG 378
Query: 298 --PETTSLCSNVKPTLFGKQIPATCV 321
T+LC G +P +C+
Sbjct: 379 GAGRATALCYRASGKSAGTVVPPSCL 404
>gi|3320462|gb|AAC26512.1| polygalacturonase precursor [Cucumis melo]
Length = 461
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 137/296 (46%), Gaps = 59/296 (19%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGP 80
A+ + NV D+GA+ DG DD++AF +W++A + LVP + Y + F GP
Sbjct: 83 ASPEIFNVDDYGAMGDG-EDDTEAFKETWKDACS--STNAIFLVPCDRVYHLKPITFSGP 139
Query: 81 CKASISFQLQGLLD----------------LFSIDTSLSL-AKGTFHGQGETAWPLNQCH 123
C + + FQ++G + +F L + KG +G G W LN C
Sbjct: 140 CNSPLLFQIEGTVKASPHISDYEKDRRHWIIFQNLLGLRVEGKGIINGNGRKWW-LNSCK 198
Query: 124 KNSDC---QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-- 178
N + PT + F + + G++ +++ ++ C N+K +L I A +S
Sbjct: 199 VNKTLPCKEAPTAVTFYQCTNLRVEGLRFRNAQQMLLSFQRCNNVKALNLWIYAPGNSPN 258
Query: 179 -------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDE 207
SK++ + CGPG GIS+GSLG G +
Sbjct: 259 TDGIHVTGTQFIVIKNCLIMTGDDCISIVSGSKNVRAKGITCGPGHGISIGSLGAGKSEA 318
Query: 208 EVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
EV + V F+ TSNGVR+KTW G A N F++IVM+NV NPI+I+Q YC
Sbjct: 319 EVSNVVVDTAKFSGTSNGVRIKTWQGGK-GYAQNIIFQNIVMDNVTNPIIINQNYC 373
>gi|147765590|emb|CAN62657.1| hypothetical protein VITISV_039093 [Vitis vinifera]
Length = 317
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 132/290 (45%), Gaps = 61/290 (21%)
Query: 31 DFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPC-KASISFQL 89
D+GAV DG TDDS+AF +W E T+ +P +LV+ A+F GPC I+ Q+
Sbjct: 2 DYGAVGDGKTDDSQAFLKAWNETCKAQSPDATMNIPAKTFLVNPAKFWGPCVPTRINIQV 61
Query: 90 QGLL------DLFSIDTSLSLA---------KGTFHGQGETAWPLNQCHKNSDCQLPTPI 134
G + L+S + L A GT GQG +WP + + +
Sbjct: 62 AGQIIANTDQSLYSNNYWLHFAYLGGLTLTGSGTIDGQGAGSWP--------ERKGVAAL 113
Query: 135 RFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSSKD------------- 181
+ + D I G+ + + HI++ GC + +N++ I+A DS
Sbjct: 114 QLFSITDLEINGLTHTNPQKAHISMTGCNGVNINNITISAPEDSPNTDGIDIGDSSHIQI 173
Query: 182 --------------------ILVSEVFCGPGQGISVGSLGKGIKD--EEVVGLTVRNCTF 219
I +++V CGPG GIS+GSLG + + V + VR+C F
Sbjct: 174 QNSKIGTGDDCIAIGTNCSFINITDVTCGPGHGISIGSLGNPVDGGYDTVSEIHVRSCDF 233
Query: 220 TC-TSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
+ GVR+KTW H G N T+E I ++ PIVIDQ YCP N C
Sbjct: 234 IGKNTTGVRIKTWQGGH-GEVKNITYEYIKFYDIARPIVIDQFYCPNNAC 282
>gi|168004644|ref|XP_001755021.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693614|gb|EDQ79965.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 419
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 162/391 (41%), Gaps = 113/391 (28%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGPCKASI 85
NV GAV DGIT+D+ AF +W +A D G V VP G +LV + F GPC+ +I
Sbjct: 15 FNVLLDGAVGDGITNDTNAFLAAWNKAC--DARNGEVYVPSGYTFLVYPSTFSGPCRCNI 72
Query: 86 SFQLQGL-----------------------LDLFSIDTSLSLAKGTFHGQGETAWPLNQC 122
F ++G LD F++ S GTF+G+G W C
Sbjct: 73 RFAVEGTIVAPEEISAWDGLNVRYWLLFIHLDYFTLKGS-----GTFNGRGYNWW---VC 124
Query: 123 HKNSDCQLPTPIRFNFL-----NDSTITGIKSVDSRYFHIN------------------- 158
++ C+ + + + T+ + VD+ HIN
Sbjct: 125 KEDKTCERAPTVSLQTVTVLKSSHVTVRTVTFVDAPQVHINFQDITEGHVKGITVLAPWS 184
Query: 159 --------ILGCYNLKLNDLKITAHAD------SSKDILVSEVFCGPG-QGISVGSLGKG 203
I G + + + + D S++I V + +CG G GISVGSLG
Sbjct: 185 SPNTDGIHISGTTDFVVRNCYVATGDDCVSIVSGSRNIGVYDTYCGIGCHGISVGSLGYN 244
Query: 204 IKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
+ V + V+NC T+NG+R+KTW GIASN F +I M+NV NPI+IDQ YC
Sbjct: 245 GQHANVTQVQVKNCQLDSTTNGLRIKTW-QGGTGIASNIDFRNIKMSNVSNPIIIDQFYC 303
Query: 264 PYNK-------------------------------CNIKPKDSMP--NIEIGNRNLVYNG 290
P ++ + D+ P NI + + NL
Sbjct: 304 PPSQTEEPCSNLSTAVHIDLVKFTNITGTSASATAVKLACSDAEPCTNIRMKDINL---- 359
Query: 291 VNVKVEGPETTSLCSNVKPTLFGKQIPATCV 321
+++G ++CSN G QIP TC+
Sbjct: 360 --TRMDGNTARAVCSNAVGVAMGVQIPPTCL 388
>gi|168005233|ref|XP_001755315.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693443|gb|EDQ79795.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 416
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 138/319 (43%), Gaps = 81/319 (25%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAE--FEGPCKASI 85
+V F AV DGITDD+KAF +WR A + +V+V P Y+ + F+GPCK ++
Sbjct: 8 DVMAFNAVGDGITDDTKAFQATWRAACQ---SESSVMVVPAYYVFVVGQITFKGPCKHNL 64
Query: 86 SFQLQGLL----DL--------------FSIDTSLSL-AKGTFHGQGETAW--------- 117
+FQ++G++ DL F + L G +G GE W
Sbjct: 65 TFQIEGVIIPPTDLAVWNKLSNKVQWIGFYKQVGMMLRGSGAINGLGEVWWSQPCKVCRI 124
Query: 118 -PLNQC-------------HKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCY 163
P N C H C PT ++F + ++ I DS H+ C
Sbjct: 125 TPTNCCEKPRRISRLIAADHGRQRCASPTALKFYGCINVSVRDITIQDSPQMHLKFDNCQ 184
Query: 164 NLK---------------------------LNDLKITAHAD------SSKDILVSEVFCG 190
++ L +L I A D + D+ + +V CG
Sbjct: 185 QVEVFNVSILSPGWSPNTDGIHLQNTGYALLQNLVIAAGDDCISLQTGTTDVTIRDVVCG 244
Query: 191 PGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMN 250
PG GIS+G LG+G V +TV++ T NGVR+KTW G+ + TF+ + +
Sbjct: 245 PGHGISIGGLGQGGSQACVSNITVQDVLIKDTQNGVRIKTWQGGS-GVVQHVTFDTVTVV 303
Query: 251 NVENPIVIDQLYCPYNKCN 269
NV+NPIVI+Q YC +C
Sbjct: 304 NVQNPIVINQFYCDAKECQ 322
>gi|359479968|ref|XP_002272733.2| PREDICTED: polygalacturonase At1g48100-like [Vitis vinifera]
Length = 465
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 131/304 (43%), Gaps = 63/304 (20%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGPCKAS 84
V +V+ FGAV +GI DD++AF +W A + V VP G +++ F GPC++
Sbjct: 69 VFDVRSFGAVGNGIADDTQAFKAAWDTACQVEE-SAIVFVPYGYSFMIQSTIFTGPCQSR 127
Query: 85 ISFQLQGLLD-------------------LFSIDTSLSLAKGTFHGQGETAWPLN-QCHK 124
+ FQ+ G L + I+ G G+GE W L + HK
Sbjct: 128 LVFQVDGTLTPPDGPDSWPQNNSKRQWLVFYRINEMSLQGGGLIDGRGENWWNLPCKPHK 187
Query: 125 NSD-------CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD 177
+ C P IRF ++ T+ G++ +S F+ C ++ + + ITA A
Sbjct: 188 GINGTTLPGPCDSPIAIRFFMSSNLTVQGLRIKNSPQFNFRFDNCRDVHIESIYITAPAL 247
Query: 178 SSK---------------------------------DILVSEVFCGPGQGISVGSLGKGI 204
S D+ + + CGP GIS+GSLG
Sbjct: 248 SPNTDGIHIENTNNVKIYNSVVSNGDDCVSIGSGCYDVDIKNITCGPSHGISIGSLGNHN 307
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
V +TVR+ + NGVR+KTW G S TF ++ MNNV NPI+IDQ YC
Sbjct: 308 SRACVSNITVRDSVLKYSDNGVRIKTWQGGS-GAVSGVTFSNLHMNNVRNPIIIDQFYCL 366
Query: 265 YNKC 268
+C
Sbjct: 367 AKQC 370
>gi|413946311|gb|AFW78960.1| polygalacturonase [Zea mays]
Length = 490
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 155/386 (40%), Gaps = 85/386 (22%)
Query: 18 RGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAE 76
RG +A +L + DFG V DGI +D++A +W A + + + VP GK Y + +
Sbjct: 105 RGAEA-RVLLTLDDFGGVGDGIANDTQALLDAWAAACS-STQEAVLAVPAGKVYQIWPVQ 162
Query: 77 FEGPCKASISFQLQGL------------------LDLFSIDTSLSLAKGTFHGQGETAWP 118
GPCK + + G L ++ +D GT G G+ W
Sbjct: 163 LSGPCKKRLKLLISGAIVAPSSPDEWAGRDPMKWLYVYGVDGLSVSGGGTIDGMGQQWWA 222
Query: 119 LN-QCHKNSDC---QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA 174
+ K C P + F + ++ G+ +++ F + C +K + L++ A
Sbjct: 223 STCKRKKTQPCYSGPRPKAVHFEECREVSVQGVTLQNAQQFQLTFTRCSCVKASFLRVVA 282
Query: 175 HADSS---------------------------------KDILVSEVFCGPGQGISVGSLG 201
ADS D+ V ++ CGPG GIS+GSLG
Sbjct: 283 PADSPNTDGIHLNDTSHVRITDNLISTGDDCVSMVGNCSDVRVKDISCGPGHGISIGSLG 342
Query: 202 KGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQL 261
K + V + V C T T+NGVR+K+W G A + FE+IVM NV NPI+IDQ
Sbjct: 343 KNRTTDMVEDVKVDTCLLTNTTNGVRIKSW-QGGTGFARDLRFENIVMRNVSNPIIIDQY 401
Query: 262 YC--PYNKCNIKPKDSMPNIEIGN---------------------RNLVYNGVNVKVEG- 297
YC P N + +E R+L VN+ +EG
Sbjct: 402 YCDQPTPCANQTQAVEVRRVEFAGIRGTSATPQAISIACSDAVPCRDLELANVNLTLEGG 461
Query: 298 --PETTSLCSNVKPTLFGKQIPATCV 321
T+LC G +P +C+
Sbjct: 462 GAGRATALCYRASGKSAGTVVPPSCL 487
>gi|125557644|gb|EAZ03180.1| hypothetical protein OsI_25333 [Oryza sativa Indica Group]
Length = 393
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 146/319 (45%), Gaps = 61/319 (19%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK 60
L+++A L F+ S D + V +++ +GA +G DD+KA +W A +
Sbjct: 6 LIVSASLLALFFFLHSADA-DVGSNVFSIQSYGAHGNGRHDDTKALGDTWAAACS-SAKP 63
Query: 61 GTVLVPPG-KYLVSFAEFEGPCKASISFQLQGLLDLFSIDTSLSLAKGTFH--------- 110
+L+P G KYL+ GPCK+SIS ++G L + S + S + H
Sbjct: 64 AVLLIPKGKKYLIKHTTLSGPCKSSISLMVKGTL-VASPERSDWSKETIRHWILISGVTG 122
Query: 111 ----------GQGETAWPLNQCHKNSD---CQLPTPIRFNFLNDSTITGIKSVDSRYFHI 157
G G+ W N C NS + PT + F + + +K V+S+ I
Sbjct: 123 LTVTGGGTIDGNGKIWWQ-NSCKTNSKLPCTEAPTALTFYSCKNLKVEYLKVVNSQQIQI 181
Query: 158 NILGCYNLKLNDLKITA----------HADSSKDILVSE--------------------- 186
++ C ++ ++ L ITA H S+D+ V++
Sbjct: 182 SVEDCTDVMVSRLSITAPETAPNTDGIHITRSRDVEVTDCMIKTGDDCMSIEDGTENLHV 241
Query: 187 --VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTF 244
+ CGPG GIS+GSLG + V +TV N T+NG R+KTW G A N F
Sbjct: 242 KNMVCGPGHGISIGSLGDHNSEAHVNNVTVDNVRLYGTTNGARIKTWQGGK-GSAKNIVF 300
Query: 245 EDIVMNNVENPIVIDQLYC 263
+++VM+NV NPI+IDQ YC
Sbjct: 301 QNMVMDNVWNPIIIDQNYC 319
>gi|242088669|ref|XP_002440167.1| hypothetical protein SORBIDRAFT_09g027150 [Sorghum bicolor]
gi|241945452|gb|EES18597.1| hypothetical protein SORBIDRAFT_09g027150 [Sorghum bicolor]
Length = 408
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 153/386 (39%), Gaps = 84/386 (21%)
Query: 18 RGIDATNRVL-NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFA 75
RG A RVL + DFG V DGI +D++A +W A + + VP GK Y +
Sbjct: 22 RGGGAEARVLLTLDDFGGVGDGIANDTQALLDAWTAACT-SSEEAVLAVPAGKAYRIWPV 80
Query: 76 EFEGPCKASISFQLQGL------------------LDLFSIDTSLSLAKGTFHGQGETAW 117
+ GPCK + + G L ++ +D GT G G+ W
Sbjct: 81 QLSGPCKKKLKLLISGAIVAPSSPDEWAGRDPMKWLYIYGVDGLSVSGGGTIDGMGQQWW 140
Query: 118 PLN-QCHKNSDCQ---LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKIT 173
+ K C P + F ++ G+ +++ F + C +K + L++
Sbjct: 141 ASTCKRKKTQPCYSGPRPKAVHFEECRGVSVQGVTLQNAQQFQLTFTRCSCVKASFLRVI 200
Query: 174 AHADS---------------------------------SKDILVSEVFCGPGQGISVGSL 200
A ADS D+ V ++ CGPG GIS+GSL
Sbjct: 201 APADSPNTDGIHLNDTSHVHITDNLISTGDDCVSMVGNCSDVHVKDISCGPGHGISIGSL 260
Query: 201 GKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQ 260
GK + V + V C T T+NGVR+K+W +G A + FE+I+M NV NPI++DQ
Sbjct: 261 GKNRTTDMVENVRVDTCLLTNTTNGVRIKSW-QGGMGFARDLRFENILMKNVSNPIIVDQ 319
Query: 261 LYC--PYNKCNIKPKDSMPNIEIGN---------------------RNLVYNGVNVKVE- 296
YC P N + +E N R L VN+ +
Sbjct: 320 YYCDQPTPCANQTQAVEVRKVEFANIRGTSATAQAISIACSDTVPCRELELANVNLTLAE 379
Query: 297 -GPETTSLCSNVKPTLFGKQIPATCV 321
G T+LC G +P +C+
Sbjct: 380 GGGRATALCYRASGKSVGTVVPPSCL 405
>gi|218199292|gb|EEC81719.1| hypothetical protein OsI_25337 [Oryza sativa Indica Group]
Length = 429
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 142/306 (46%), Gaps = 61/306 (19%)
Query: 16 SVRG---IDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YL 71
S+RG +++ V +V+ GA DG DD+KA +W A + VLVP GK YL
Sbjct: 39 SLRGKSSLESKKAVFDVRKHGAYGDGQHDDTKALSKAWAVACS-SLQPSIVLVPKGKRYL 97
Query: 72 VSFAEFEGPCKASISFQLQGLLD-----------------LFSIDTSLSL-AKGTFHGQG 113
GPCK+SI+F ++G L +F+ L++ GT G G
Sbjct: 98 TKHITLSGPCKSSITFMIEGTLVAPPTRSDWSKETIRHWIMFNGVIGLTVDGGGTVDGNG 157
Query: 114 ETAWPLNQCHKNSD---CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
+ W N C N+ + PT + F ++ + +K ++S+ H+++ C N++++ L
Sbjct: 158 KIWWQ-NSCKTNAKLACTESPTALTFYSCSNLKVENLKLLNSQQIHMSVEDCTNVRISGL 216
Query: 171 KITA----------HADSSKDILVS-----------------------EVFCGPGQGISV 197
ITA H SK++ V+ + CGPG GIS+
Sbjct: 217 TITAPGTSPNTDGIHITRSKNVQVTGCTIKTGDDCMSIEDGTENLHVKNMVCGPGHGISI 276
Query: 198 GSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIV 257
GSLG + V +T+ T+NG R+KTW G A F++++M NV NP++
Sbjct: 277 GSLGDHNSEAHVNNVTIGTVRLYGTTNGARIKTWQGGR-GYAKYIVFQNMIMENVWNPVI 335
Query: 258 IDQLYC 263
IDQ YC
Sbjct: 336 IDQNYC 341
>gi|297743438|emb|CBI36305.3| unnamed protein product [Vitis vinifera]
Length = 372
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 133/294 (45%), Gaps = 62/294 (21%)
Query: 31 DFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPC-KASISFQL 89
D+GAV DG TDDS+AF +W E T+ +P +LV+ A+F GPC I+ Q+
Sbjct: 2 DYGAVGDGKTDDSQAFLKAWNETCKAQSPDATMNIPAKTFLVNPAKFWGPCVPTRINIQV 61
Query: 90 QGLL------DLFSIDTSLSLA---------KGTFHGQGETAWPLNQC----HKNSDCQL 130
G + L+S + L A GT GQG +WP + H L
Sbjct: 62 AGQIIANTDQSLYSNNYWLHFAYLGGLTLTGSGTIDGQGAGSWPERKGVAIWHV-----L 116
Query: 131 PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSSKD--------- 181
++ + D I G+ + + HI++ GC + +N++ I+A DS
Sbjct: 117 GQALQLFSITDLEINGLTHTNPQKAHISMTGCNGVNINNITISAPEDSPNTDGIDIGDSS 176
Query: 182 ------------------------ILVSEVFCGPGQGISVGSLGKGIKD--EEVVGLTVR 215
I +++V CGPG GIS+GSLG + + V + VR
Sbjct: 177 HIQIQNSKIGTGDDCIAIGTNCSFINITDVTCGPGHGISIGSLGNPVDGGYDTVSEIHVR 236
Query: 216 NCTFTC-TSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
+C F + GVR+KTW H G N T+E I ++ PIVIDQ YCP N C
Sbjct: 237 SCDFIGKNTTGVRIKTWQGGH-GEVKNITYEYIKFYDIARPIVIDQFYCPNNAC 289
>gi|118197959|gb|ABK78768.1| putative allergen Cup a 2 variant 1 [Hesperocyparis arizonica]
Length = 384
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 136/295 (46%), Gaps = 62/295 (21%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGPCKAS 84
V NV+ GAV DG D + AF+ +W EA + LVP K++V+ F GPC+
Sbjct: 6 VFNVEHHGAVGDGNHDSTDAFEKTWNEACK--TLSAVFLVPANKKFVVNNLVFYGPCQPH 63
Query: 85 ISFQLQGLLDLFS-----------------IDTSLSLAKGTFHGQGETAWPLNQCHK--- 124
SF++ G++ + D +L + G GQG W +QC
Sbjct: 64 FSFKVDGIIAAYPDPVKWKNSKIWMHFARLTDFNL-MGTGVIDGQGSKWWS-DQCKTVNG 121
Query: 125 ---NSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--- 178
+D PT I+ +F T+ + ++S FH+ C +K+ +KI A +S
Sbjct: 122 RTVCNDKGRPTAIKIDFSKSVTVKELTLMNSPEFHLVFGECDGVKIQGIKIKAPKESPNT 181
Query: 179 ------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEE 208
S +I ++++ CGPG G+S+GSLGKG E
Sbjct: 182 DGIDIFGSKRFEIEKCIIGTGDDCVAIGTGSSNITITDLTCGPGHGMSIGSLGKGNSRSE 241
Query: 209 VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
V + + F T NG+R+KTW G+AS+ T+E++ M N ENPI+I+Q YC
Sbjct: 242 VSFVHLDGAKFIDTQNGLRIKTWQGGS-GLASHITYENVEMVNAENPILINQFYC 295
>gi|19310405|gb|AAL84942.1| At2g41850/T11A7.5 [Arabidopsis thaliana]
Length = 433
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 151/321 (47%), Gaps = 58/321 (18%)
Query: 3 LAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGT 62
L R + + VR T ++V DFGA DG TDD++AF +W++A + +G
Sbjct: 44 LIKRREDITGLRSFVRASLRTPTTVSVSDFGAKGDGKTDDTQAFVNAWKKACSSNGAV-N 102
Query: 63 VLVPPGK-YLVSFAEFEGPCKASISFQLQGLLD---------------LFSIDTSLSL-- 104
+LVP G YL+ + GPC + ++ Q+ G L +F +LS+
Sbjct: 103 LLVPKGNTYLLKSIQLTGPCNSILTVQIFGTLSASQKRSDYKDISKWIMFDGVNNLSVDG 162
Query: 105 -AKGTFHGQGETAWPLNQCHKNSD---CQLPTPIRFNFLNDSTITGIKSVDSRYFHINIL 160
G G GET W N C +N PT + F + +K +++ I+I
Sbjct: 163 GDTGVVDGNGETWWQ-NSCKRNKAKPCTXAPTALTFYNSKSLIVKNLKVRNAQQIQISIE 221
Query: 161 GCYNLKLNDLKITAHADS---------------------------------SKDILVSEV 187
C N++++++ +TA ADS S+++ ++++
Sbjct: 222 KCSNVQVSNVVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESGSQNVQINDI 281
Query: 188 FCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDI 247
CGPG GIS+GSLG V G+TV + T NGVR+KT+ G ASN F++I
Sbjct: 282 TCGPGHGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGS-GTASNIIFQNI 340
Query: 248 VMNNVENPIVIDQLYCPYNKC 268
M+NV+NPI+IDQ C KC
Sbjct: 341 QMDNVKNPIIIDQDDCDKGKC 361
>gi|297743440|emb|CBI36307.3| unnamed protein product [Vitis vinifera]
Length = 404
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 136/298 (45%), Gaps = 62/298 (20%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKASIS 86
NV ++GAV +G TDDS+AF +WR+ +++P GK +L+ +F GPCK S
Sbjct: 33 NVMNYGAVGNGATDDSQAFMRAWRDICAGKSYP-NLVIPGGKTFLLRPVQFYGPCKPSKI 91
Query: 87 F------------------QLQGLLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDC 128
+ L + + ++ G +G+G W Q + ++ C
Sbjct: 92 YVEVYGRIVAPKLYDYGSNNLNCWIGFWHVNGLTVKGNGQINGRGAEWW---QAYTSTYC 148
Query: 129 QL--PTP---IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA--------- 174
+L TP + F N+ + G+ ++S+ HI++ G + ++ L ITA
Sbjct: 149 KLNASTPSIAMGFYSCNNLLLQGLNFINSQRNHISVSGSNGVTISHLTITAPDSSPNTDG 208
Query: 175 ------------------------HADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVV 210
D + + V V CGPG GIS+GSLG G +V
Sbjct: 209 IDISHSKNVRVSDSTIGTGDDCIAFGDQTSQVFVKGVACGPGHGISIGSLGVGGASAQVE 268
Query: 211 GLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
+ V +C+F T NG R+KTW G A TF +I + + ENPI+IDQ YCP++ C
Sbjct: 269 EIHVDSCSFKGTQNGARIKTWQGGS-GYARKITFNNIKLEDAENPIIIDQYYCPHSVC 325
>gi|242032587|ref|XP_002463688.1| hypothetical protein SORBIDRAFT_01g004230 [Sorghum bicolor]
gi|241917542|gb|EER90686.1| hypothetical protein SORBIDRAFT_01g004230 [Sorghum bicolor]
Length = 436
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 139/292 (47%), Gaps = 56/292 (19%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP-PGKYLVSFAEFEGPCKAS 84
V ++ +GA DG DD+ A + +W EA VLVP G+YL+ GPCK+S
Sbjct: 61 VFSLDSYGARGDGRHDDTPALEKAW-EAACASPRPAVVLVPNGGRYLLKLVTLRGPCKSS 119
Query: 85 ISFQLQGLLD-----------------LFSIDTSLSL-AKGTFHGQGETAWPLN-QCHKN 125
++ ++G L +F L++ GT G G+ WP + + +K
Sbjct: 120 VTLTVKGTLVASPDRADWSDKDRRHWIVFRRVNKLTVNGGGTIDGNGQKWWPHSCKINKT 179
Query: 126 SDCQL-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------ 178
C++ PT + F+ + + +K ++ + H+++ C ++ L L ITA A S
Sbjct: 180 LPCKVAPTALSFHHCTNLRVDNLKIMNGQQMHMSVEDCTDVVLARLSITAPARSPNTDGI 239
Query: 179 ---------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVG 211
+ ++ VS+V CGPG GIS+GSLG EV G
Sbjct: 240 HITRSKNVRVTNCKIKTGDDCMSIENGTHNLHVSKVVCGPGHGISIGSLGDDNSRAEVSG 299
Query: 212 LTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
+T+ + T+NG R+KT+ G A + TF++++M V+NPI+IDQ YC
Sbjct: 300 ITIDSVQLYGTTNGARIKTYQGGS-GYAKDITFQNMIMYGVKNPIIIDQNYC 350
>gi|242053753|ref|XP_002456022.1| hypothetical protein SORBIDRAFT_03g029030 [Sorghum bicolor]
gi|241927997|gb|EES01142.1| hypothetical protein SORBIDRAFT_03g029030 [Sorghum bicolor]
Length = 532
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 136/307 (44%), Gaps = 67/307 (21%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGP-CKA 83
V NV DFGA DG+TDD+KAF+ +W A N TVLVPP ++LV F GP CK
Sbjct: 133 VFNVVDFGAKGDGVTDDTKAFEGAWAAACNQGA--STVLVPPELEFLVGPISFSGPYCKP 190
Query: 84 SISFQLQGL-----------------LDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNS 126
+I FQL+G L+ ++ + G +G+G+ W
Sbjct: 191 NIVFQLEGTILAPTSAKSWGSGLLQWLEFTKLNGIVIQGNGIINGRGQQWWTYLDPEDED 250
Query: 127 DCQL------------PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA 174
D PT +RF + + GI V+S H+ C + ++D+ I++
Sbjct: 251 DDDTYDVEFERMPQIKPTALRFYGSFNVVVAGITIVNSSQCHLKFDNCQGVMVHDVTISS 310
Query: 175 ----------HADSSKDILVSE-----------------------VFCGPGQGISVGSLG 201
H +SKD+ + V CGPG GIS+G LG
Sbjct: 311 PENSLNTDGIHLQNSKDVSIHHTNLACGDDCISIQTGCSNINIHNVNCGPGHGISIGGLG 370
Query: 202 KGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQL 261
+ V +TVR+ T NGVR+KTW +G+ + F +I ++ V+ PI+IDQ
Sbjct: 371 RDNTKACVSNVTVRDVNMFRTMNGVRIKTW-QGGVGLVQDIRFSNIQVSEVQTPIIIDQF 429
Query: 262 YCPYNKC 268
YC + C
Sbjct: 430 YCDRSTC 436
>gi|255548942|ref|XP_002515527.1| polygalacturonase, putative [Ricinus communis]
gi|223545471|gb|EEF46976.1| polygalacturonase, putative [Ricinus communis]
Length = 363
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 155/341 (45%), Gaps = 80/341 (23%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVL--VPPGKYLVSFAEFEGPCK 82
R N +FGA+ DG TD+S+AF +W EA ++GT +P G +L++ +FEGPCK
Sbjct: 26 RNFNAAEFGAIGDGQTDNSEAFLKAW-EAVCTATVRGTATLEIPAGTFLLNPVKFEGPCK 84
Query: 83 AS-ISFQLQG-LLDLFSIDTSLSLAK------------------GTFHGQGETAWPLNQC 122
++ + Q+ G ++ +ID K G G+G W L
Sbjct: 85 SNKVHLQVLGKIVAPRTIDEWRPRCKSSVWLLFRGISGLIVNGPGAIDGRGSNWWKL--- 141
Query: 123 HKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---- 178
++F+ N ++G+ ++S HI + GC + +++L I+A DS
Sbjct: 142 ----------ALQFHNCNHVKLSGLTHMNSPKVHIGVNGCKGVSISNLNISAPEDSPNTD 191
Query: 179 ------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWP 232
S D+ +S G +G +++V + V+NCTF T NGVR+KTWP
Sbjct: 192 GIGISGSTDVHISNSTIGTDKGC----------NDKVEDVHVQNCTFIGTQNGVRIKTWP 241
Query: 233 DSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCN---------------------IK 271
G A N +FE IV++ +NPI+IDQ YC +KC K
Sbjct: 242 GGS-GYAKNISFERIVLHQTKNPIIIDQHYCNGHKCTEKAVAVELSGIKYSGVEGTSASK 300
Query: 272 PKDSMPNIEIGNRNLVYNGVNVKVEGP--ETTSLCSNVKPT 310
+ +IG RN+ + +N+ P + + C+N K T
Sbjct: 301 QAITFDCAKIGCRNIAMDQINITSSSPGKQIHAFCNNAKGT 341
>gi|357129630|ref|XP_003566464.1| PREDICTED: polygalacturonase At1g48100-like [Brachypodium
distachyon]
Length = 596
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 130/304 (42%), Gaps = 64/304 (21%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPP-GKYLVSFAEFEGPCKAS 84
V +V+ FGA + DD+ AF +W A G +LVP G + ++ F GPC+
Sbjct: 200 VFDVRAFGAAGESTADDTDAFRAAWSAACAVQ--SGVLLVPSDGTFTIASTTFSGPCQPG 257
Query: 85 ISFQLQGLLD------------------LFS-IDTSLSLAKGTFHGQGETAWPL------ 119
+ FQ+ G+L +FS +D GT G GE W L
Sbjct: 258 LVFQVDGVLMPPDGPDCWPPSDNRRQWLVFSNLDGMTLRGAGTIEGNGEEWWNLPCKPHR 317
Query: 120 --NQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD 177
N + C PT IRF + + G++ +S FH GC ++ ++ L I+A A+
Sbjct: 318 GPNGSTLHGPCDSPTLIRFFMSRNLVVEGLRVENSPEFHFRFDGCSDVLVDGLFISAPAN 377
Query: 178 S---------------------------------SKDILVSEVFCGPGQGISVGSLGKGI 204
S S D+ + + CGPG GIS+GSLG
Sbjct: 378 SPNTDGIHVENTERVRIYNSKISNGDDCISIGTGSYDLDIQNISCGPGHGISIGSLGVHN 437
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
V +TVRN + NG+R+KTW G S F+ ++M NV N I+IDQ YC
Sbjct: 438 SQACVANVTVRNAVIRNSDNGLRIKTW-QGGAGSVSGIAFDGVLMENVRNCIIIDQYYCL 496
Query: 265 YNKC 268
+C
Sbjct: 497 DKRC 500
>gi|356550861|ref|XP_003543801.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Glycine
max]
Length = 424
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 133/314 (42%), Gaps = 96/314 (30%)
Query: 49 SWREAWNWDGIKGT----VLVPPGKYLVSFAEFEGPCKASISFQLQGLLDL--------- 95
+WR +N D T V+VP GKY + +F PCK+ I + G++
Sbjct: 37 NWR--YNHDACLSTTPRKVVVPSGKYKLRQIDFMRPCKSPIEVHINGIIKASKNSLHING 94
Query: 96 ------FSIDTSLSLA-KGTFHGQGETAWPLNQCHKNSDCQL------------------ 130
F L+L+ TFHG G+ AW N N++C+
Sbjct: 95 QDXWVRFGYINFLTLSGNRTFHGGGKMAWKQNNYATNNNCKKLAMINIIKITNFFHVNVF 154
Query: 131 ------------------------PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLK 166
P F F+N+S I I S DS+YFH+NILGC N+
Sbjct: 155 GCKNIAFTNFKVSSLAYSPNTAHSPQNFGFGFVNNSVIQDITSKDSKYFHVNILGCKNIT 214
Query: 167 LNDLKITAHA-------------------------------DSSKDILVSEVFCGPGQGI 195
+ ++++ A D SK++++ V CG I
Sbjct: 215 FTNFEVSSLAYSPNTNGSHIEKSTQVKITKIDTDNDYISLGDGSKEVIILNVTCGLEHSI 274
Query: 196 SVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHI-GIASNFTFEDIVMNNVEN 254
SV SL K +E V L V+NCT T+NG+R+KTWP + I +A + FED M NV N
Sbjct: 275 SVRSLXKYSNEEFVEDLNVKNCTLRNTNNGLRIKTWPGTPINSLAFDLHFEDTKMINVIN 334
Query: 255 PIVIDQLYCPYNKC 268
I+IDQ C +N+C
Sbjct: 335 LIIIDQEXCQWNQC 348
>gi|356555461|ref|XP_003546050.1| PREDICTED: probable polygalacturonase At3g15720-like [Glycine max]
Length = 401
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 143/319 (44%), Gaps = 61/319 (19%)
Query: 6 RFSLLVSFITSVR--GIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTV 63
F +V I SV G+ +T NV +GAV +G T+DS AF +W+ A +
Sbjct: 2 EFFFIVLMILSVLTPGLSSTIITFNVLQYGAVGNGQTNDSPAFLKAWKAACQSKSHIARL 61
Query: 64 LVPPGK-YLVSFAEFEGPCKASISF-QLQGLLDL-----------------FSIDTSLSL 104
++P + +L+ F GPCK++ ++ QL G + FS L++
Sbjct: 62 IIPAKRTFLLKPTTFSGPCKSNYTYIQLSGNIVAPKTKSEYSGFHTNTWLGFSFVNGLAI 121
Query: 105 A-KGTFHGQGETAWPLNQCHKN----SDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINI 159
+ KGT G+G +AW C N + C+ PT + FN N + G S++ H+ +
Sbjct: 122 SGKGTIDGRG-SAWWQQPCVGNPQPGATCRPPTAVTFNRCNRLQLKGYTSINPARSHVTL 180
Query: 160 LGCYNLKLNDLKITAHADS---------------------------------SKDILVSE 186
C ++++++ A S S I ++
Sbjct: 181 TSCNKGIISNIRLIAPGTSPNTDGIDISGSTGIQVLNSFIATGDDCIAISAGSSKIKITG 240
Query: 187 VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFED 246
+ CGPG GIS+GSLG + V + V NCT T T GVR+KTW G A TFE+
Sbjct: 241 ITCGPGHGISIGSLGTRGDTDIVEDVHVENCTLTETLTGVRIKTW-QGGAGYARRITFEN 299
Query: 247 IVMNNVENPIVIDQLYCPY 265
I +PI+IDQ YCP+
Sbjct: 300 IRFVRANSPIIIDQFYCPH 318
>gi|125585408|gb|EAZ26072.1| hypothetical protein OsJ_09925 [Oryza sativa Japonica Group]
Length = 411
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 127/273 (46%), Gaps = 42/273 (15%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKA 83
RV++V D+ A AD D ++AF +W+EA N +LVP GK YL+ F GPC+A
Sbjct: 64 RVVDVDDYRARADA-GDHTEAFLQAWKEACNSSDYPSVLLVPEGKTYLLMPVSFNGPCRA 122
Query: 84 SISFQLQGLLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDST 143
+ + + +ID L + G W +N C N L F N
Sbjct: 123 T-TITATEWITFDNID-HLRVLGGGTLNGNGHQWWINSCKTNRSMAL----YFRRCNHLV 176
Query: 144 ITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADSSKDILVSE------- 186
+ G++ DS H+ I + + ++ L ITA H +S+++L+S
Sbjct: 177 VEGLQIRDSMQMHVVIAYSWRVLVSRLLITAPGWSPNTDGIHVSNSREVLMSGCIISTGD 236
Query: 187 ----------------VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKT 230
+FCGPG GIS+GSLG V + V T T+NGVR+KT
Sbjct: 237 DCISIVTGSMFIRATGIFCGPGHGISIGSLGANKSWAHVSDVLVEKATLVGTTNGVRIKT 296
Query: 231 WPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
W G A TF+DI M+NV NP++IDQ YC
Sbjct: 297 WQGGD-GHAERITFQDITMHNVTNPVIIDQNYC 328
>gi|449439073|ref|XP_004137312.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
Length = 276
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 97/188 (51%), Gaps = 55/188 (29%)
Query: 116 AWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA 174
AWP N C N +C+ LPT N+ H + GC N+ + +++I+A
Sbjct: 33 AWPRNDCRNNPNCRSLPT-------NN--------------HFMLFGCSNINITNIRISA 71
Query: 175 HADS---------------------------------SKDILVSEVFCGPGQGISVGSLG 201
DS SK+I +S V CGPG GIS+GSLG
Sbjct: 72 PGDSPNTDGIKIGTSDHIDIRNSIIGTGDDCISMLSGSKNIYISNVVCGPGHGISIGSLG 131
Query: 202 KGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQL 261
K ++E V+G+TV+NCTF T++GVR+KTW +G A N +EDI M+ V NPI+IDQ
Sbjct: 132 KYKEEENVMGITVKNCTFKNTTDGVRIKTWATPLMGTAYNIYYEDIFMDGVANPIIIDQE 191
Query: 262 YCPYNKCN 269
YCP + CN
Sbjct: 192 YCPVSPCN 199
>gi|26450968|dbj|BAC42591.1| putative polygalacturonase [Arabidopsis thaliana]
gi|28950771|gb|AAO63309.1| At3g07830 [Arabidopsis thaliana]
Length = 225
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 95/176 (53%), Gaps = 36/176 (20%)
Query: 176 ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSH 235
D ++LV V CGPG GISVGSLG+ +++V G+ V NCT T NG+R+KTWP +
Sbjct: 45 GDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTLQETDNGLRIKTWPSAA 104
Query: 236 IG-IASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSM------------------ 276
ASN FE+I++ NV NPI+IDQ YCP+N+CN + S+
Sbjct: 105 CSTTASNIHFENIILRNVSNPILIDQEYCPWNQCNKQKSSSIKLANISFRRIRGTSGNKD 164
Query: 277 ------------PNIEIGNRNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 320
N+++G+ N+ Y G +GP T +CSNV+P L G Q P C
Sbjct: 165 AVKLLCSKGYPCENVQVGDINIQYTG----ADGP-ATFMCSNVRPKLVGTQFPKAC 215
>gi|225442916|ref|XP_002265133.1| PREDICTED: probable polygalacturonase At3g15720-like [Vitis
vinifera]
Length = 374
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 133/292 (45%), Gaps = 56/292 (19%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKAS-I 85
NV +GAV +G TDDSKAF +W + +++PP +L+ +F GPCKAS I
Sbjct: 10 FNVVSYGAVGNGKTDDSKAFMKAWSAVCHGQSHDAHLIIPPKTFLLKPVKFSGPCKASRI 69
Query: 86 SFQLQGLLD--------------LFSIDTSLSL-AKGTFHGQGETAWPLNQCHKNSDCQL 130
+ Q+ G L LF L+L KG+ G+G W Q H +SD +
Sbjct: 70 TVQVLGKLVASTNKRAFNGNYWLLFHKVKGLTLWGKGSIDGKGSAWW---QQH-DSDFR- 124
Query: 131 PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------ 178
P ++F + G+ ++S+ HI I C+ ++ +K+ A DS
Sbjct: 125 PAALKFYECPGMVLKGLTHLNSQKQHIVITKCHGALISKIKVIAPEDSPNTDGINIASSK 184
Query: 179 ---------------------SKDILVSEVFCGPGQGISVGSLGK-GIKDEEVVGLTVRN 216
S +I + + C P GIS+G+LG G DE V + V +
Sbjct: 185 NVRVQRSHISTGDDCIAISAGSSNIKIKGMTCAPSHGISIGALGDPGKPDESVEKVDVSD 244
Query: 217 CTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
CTF GVR+KTW G N ++++I + V PIVIDQ YCP C
Sbjct: 245 CTFKGPGIGVRIKTWQGGR-GRVRNISYKNIEVQEVGTPIVIDQFYCPRGGC 295
>gi|357118928|ref|XP_003561199.1| PREDICTED: polygalacturonase QRT2-like [Brachypodium distachyon]
Length = 471
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 138/293 (47%), Gaps = 58/293 (19%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKASI 85
++V GAV DG +DD+ AF +W + T++VP K +L+ F G C +++
Sbjct: 83 VDVVSHGAVGDGESDDTPAFMEAWASVCS-SSTPATLIVPKEKTFLLKQTVFSGRCNSTV 141
Query: 86 SFQLQGLLD-------------------LFS-IDTSLSLAKGTFHGQGETAWPLN-QCHK 124
+F+L G L +FS +D GT G GE W + + K
Sbjct: 142 TFKLDGKLVAPATRSESDWGKGNNRRWIMFSKVDGLTVTGDGTIDGSGEIWWKKSCRVDK 201
Query: 125 NSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----- 178
N C PT + N+ T+ I+ ++S+ H+++ C ++ L ++ITA DS
Sbjct: 202 NLPCTGAPTALLLYKCNNLTVENIRLLNSQQMHMSVEDCKDVVLKRVRITAPGDSPNTDG 261
Query: 179 -----SKDILV-----------------------SEVFCGPGQGISVGSLGKGIKDEEVV 210
+KDI V S V CGPG GIS+GSLG + V
Sbjct: 262 IHIARTKDIQVIDCDIGTGDDCMSIETGTENLYASGVTCGPGHGISIGSLGDDNSEARVS 321
Query: 211 GLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
+T+ T T+NG R+K+W G A + T+ED+VM +V+NPI++DQ YC
Sbjct: 322 NITIYKARLTGTTNGARIKSWQGGR-GYARDITYEDMVMEDVKNPIILDQNYC 373
>gi|3367585|emb|CAA20037.1| putative polygalacturonase [Arabidopsis thaliana]
gi|7270518|emb|CAB80283.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 374
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 140/306 (45%), Gaps = 68/306 (22%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS-I 85
NV +F A DG TDDS+AF +W A DG T+L+P GK +L+ F+GPCK+S I
Sbjct: 15 NVLNFDAKGDGQTDDSEAFLQAWTAACGGDGDIKTLLIPSGKTFLLQPTVFQGPCKSSSI 74
Query: 86 SFQLQGLL----DLFSIDTSLS--------------LAKGTFHGQGETAWPLNQCHKNSD 127
QL G + D F+ +S + GT +G + W
Sbjct: 75 KVQLDGTIVAPSDKFAWSDPISRMWIKFSTVSGLIIVGSGTIDSRGSSFWE--------- 125
Query: 128 CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--------- 178
+ + ++ I GI S+DS HI+I C + ++++ + A S
Sbjct: 126 -----ALHISKCDNLRINGITSIDSPKNHISIKTCNTVAISNINLFAPETSPNTDGIDIS 180
Query: 179 ------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTV 214
S +I ++ + CGPG GISVGSLG G + +V + V
Sbjct: 181 DSTNINIFDSTIQTGDDCIAINSGSSNINITGINCGPGHGISVGSLGAGGAEAKVSDVQV 240
Query: 215 RNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKD 274
+CTF T+NG R+KTW G A N +F DI + N +NPI+IDQ Y + +
Sbjct: 241 THCTFNQTTNGARIKTWLGGQ-GYARNISFTDITLVNTKNPIIIDQHYIDKGRLTEESAV 299
Query: 275 SMPNIE 280
++ N++
Sbjct: 300 AISNVK 305
>gi|125542915|gb|EAY89054.1| hypothetical protein OsI_10538 [Oryza sativa Indica Group]
Length = 411
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 127/273 (46%), Gaps = 42/273 (15%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKA 83
RV++V D+ A AD D ++AF +W+EA N +LVP GK YL+ F GPC+A
Sbjct: 64 RVVDVDDYRARADA-GDHTEAFLQAWKEACNSSDYPSVLLVPEGKTYLLMPVSFNGPCRA 122
Query: 84 SISFQLQGLLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDST 143
+ + + +ID L + G W +N C N L F N
Sbjct: 123 T-TITATEWITFDNID-HLRVLGGGTLNGNGHQWWINSCKTNRSMAL----YFRRCNHLV 176
Query: 144 ITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADSSKDILVSE------- 186
+ G++ DS H+ I + + ++ L ITA H +S+++L+S
Sbjct: 177 VDGLQIRDSMQMHVVIAYSWRVLVSRLLITAPGWSPNTDGIHVSNSREVLMSGCIISTGD 236
Query: 187 ----------------VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKT 230
+FCGPG GIS+GSLG V + V T T+NGVR+KT
Sbjct: 237 DCISIVTGSMFIRATGIFCGPGHGISIGSLGANKSWAHVSDVLVEKATLVGTTNGVRIKT 296
Query: 231 WPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
W G A TF+DI M+NV NP++IDQ YC
Sbjct: 297 WQGGD-GHAERITFQDITMHNVTNPVIIDQNYC 328
>gi|357168192|ref|XP_003581528.1| PREDICTED: polygalacturonase ADPG1-like [Brachypodium distachyon]
Length = 406
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 144/324 (44%), Gaps = 67/324 (20%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPC-K 82
R +V +FGA DG TDD+KAF+ +W G T+ VP + +LV F GPC
Sbjct: 34 RAFSVVNFGARGDGTTDDTKAFEQAWAATCGARGPSATLHVPANRSFLVGPTTFHGPCTS 93
Query: 83 ASISFQLQGLLD----------------LFSIDTSLSL---AKGTFHGQGETAWPLNQCH 123
A ++ Q+ G + +F L++ + G G+G+T WP +C
Sbjct: 94 ARVTVQVLGTITAPPSTSAAWKWSDYWLMFQQVRGLTVTGGSAGVLDGRGQTWWP-RKCK 152
Query: 124 KNSDCQL--PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--- 178
+N C + PT ++ + ++ + S DS HI + + + L ITA DS
Sbjct: 153 RNG-CLVVAPTALKLVSCDGLELSYLSSKDSPQMHIVVSTSRGVNMTHLTITAPGDSPNT 211
Query: 179 ------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEE 208
++ + V + CGPG G+SVGSLG+ +
Sbjct: 212 DGIHLDRSEGVQITGSTIGTGDDCVSIGSGTRFVTVDGLVCGPGHGVSVGSLGRKGSNAA 271
Query: 209 VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
V + VRN F TSNG R+KTW G A + +F DI NV++P+VI+Q Y
Sbjct: 272 VEYIDVRNVHFINTSNGARIKTWLGGQ-GYARSISFTDIKFTNVDHPVVINQFYVD---- 326
Query: 269 NIKPKDSMPNIEIGNRNLVYNGVN 292
+ SM + I RN+ Y +N
Sbjct: 327 --RAIQSMGGVAI--RNITYTNLN 346
>gi|356512221|ref|XP_003524819.1| PREDICTED: polygalacturonase At1g48100 [Glycine max]
Length = 490
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 138/308 (44%), Gaps = 64/308 (20%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGP 80
+++ V +V+ FGAV DG DD++AF +W+ A D G VL P + +S F GP
Sbjct: 90 SSDCVFDVRSFGAVGDGCADDTRAFRAAWKAACAVD--SGVVLAPENYIFKISSTIFSGP 147
Query: 81 CKASISFQLQGLLD-------------------LFSIDTSLSLAKGTFHGQGETAWPLN- 120
CK + FQ+ G L + +D GT G G+ W L
Sbjct: 148 CKPGLVFQVDGTLMAPDGPNSWPEADSRNQWLVFYRLDQMTLNGTGTIEGNGDKWWDLPC 207
Query: 121 QCHK-------NSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKIT 173
+ H+ + C P IRF ++ + G+K +S FH+ GC + ++ L I+
Sbjct: 208 KPHRGPSGKTLSGPCGSPAMIRFFMSSNLKVNGLKIQNSPQFHMIFNGCQGVLIDKLSIS 267
Query: 174 A----------HADSSK-----------------------DILVSEVFCGPGQGISVGSL 200
+ H ++SK ++ ++ + CGP GIS+GSL
Sbjct: 268 SPKLSPNTDGIHVENSKYVGIYNSMISNGDDCISIGPGSSNVDIAGLTCGPSHGISIGSL 327
Query: 201 GKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQ 260
G V LTVR+ + NG+R+KTW +G S+ FE+I M NV N I+IDQ
Sbjct: 328 GVHNSQACVSNLTVRDSIIRESDNGLRIKTW-QGGMGSVSSLRFENIQMENVGNCIIIDQ 386
Query: 261 LYCPYNKC 268
YC +C
Sbjct: 387 YYCMSKEC 394
>gi|218200142|gb|EEC82569.1| hypothetical protein OsI_27120 [Oryza sativa Indica Group]
Length = 394
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 154/373 (41%), Gaps = 86/373 (23%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKAS--I 85
+V D+GA A G D + AF +W A G + + VP G +LV A F GPC+++ +
Sbjct: 29 SVVDYGARAGGRADATGAFLAAWAAACGDGGERPVMRVPAGTFLVGRAYFRGPCRSAGGV 88
Query: 86 SFQLQGLLDL-----------FSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLP--- 131
+ G + F L++ GT G G W C + + P
Sbjct: 89 VLAIDGTVVAPPAVGNASWITFHYAHGLAIRGGTLDGNGHAFW---ACKAAAGRRCPPGT 145
Query: 132 TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----------SKD 181
T + + N+ ++ + VDS+ H++I C + L L+I A ADS S+D
Sbjct: 146 TTLDISQSNNVSVKRVTLVDSKNVHVSIFDCAGVTLQGLRIAAPADSPNTDGIHVALSRD 205
Query: 182 ILV-----------------------SEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCT 218
+ V + CGPG GIS+GSLG + EV +TV + +
Sbjct: 206 VAVLGATVRTGDDCVSVGPGTSGVAIRNIRCGPGHGISIGSLGGRAGEGEVRNVTVESAS 265
Query: 219 FTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYN------KCNIKP 272
T NG+R+KTW G S F ++ M +V+NPIV+DQ YCP N +K
Sbjct: 266 LAGTQNGLRIKTWGKPFAGRVSGVRFANVAMRDVQNPIVVDQNYCPGNINCPGQSSGVKI 325
Query: 273 KD----------------------SMP--NIEIGNRNLVYNGVNVKVEGPETTSLCSNVK 308
D S P I + N NL Y+G G S C N
Sbjct: 326 SDVEYEGITGTSATAVAVRFDCSRSNPCTGIRLRNINLTYDGGG----GKPARSFCKNAG 381
Query: 309 PTLFGKQIPATCV 321
+ G IP +C+
Sbjct: 382 GSASGVVIPPSCL 394
>gi|359482694|ref|XP_002266543.2| PREDICTED: probable polygalacturonase At3g15720-like [Vitis
vinifera]
Length = 366
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 129/290 (44%), Gaps = 56/290 (19%)
Query: 31 DFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKASISF-- 87
++GAV +G TDDS+AF +WR+ +++P GK +L+ +F GPCK S +
Sbjct: 2 NYGAVGNGATDDSQAFMRAWRDICAGKSYP-NLVIPGGKTFLLRPVQFYGPCKPSKIYVE 60
Query: 88 ----------------QLQGLLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLP 131
L + + ++ G +G+G W K Q P
Sbjct: 61 VYGRIVAPKLYDYGSNNLNCWIGFWHVNGLTVKGNGQINGRGAEWWQAYTSGK--IYQRP 118
Query: 132 TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------------- 174
T + F N+ + G+ ++S+ HI++ G + ++ L ITA
Sbjct: 119 TAMGFYSCNNLLLQGLNFINSQRNHISVSGSNGVTISHLTITAPDSSPNTDGIDISHSKN 178
Query: 175 ----------------HADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCT 218
D + + V V CGPG GIS+GSLG G +V + V +C+
Sbjct: 179 VRVSDSTIGTGDDCIAFGDQTSQVFVKGVACGPGHGISIGSLGVGGASAQVEEIHVDSCS 238
Query: 219 FTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
F T NG R+KTW G A TF +I + + ENPI+IDQ YCP++ C
Sbjct: 239 FKGTQNGARIKTWQGGS-GYARKITFNNIKLEDAENPIIIDQYYCPHSVC 287
>gi|222632421|gb|EEE64553.1| hypothetical protein OsJ_19405 [Oryza sativa Japonica Group]
Length = 385
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 140/354 (39%), Gaps = 79/354 (22%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
+L + DFGAV DGIT+D++AF +W A + VP GK Y + GPCK
Sbjct: 34 LLTLDDFGAVGDGITNDTQAFLDAWNAACASTD-PAVLAVPAGKTYQIWPVRLAGPCKKK 92
Query: 85 ISFQLQGLLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTI 144
+ + G + A P S P ++F ++
Sbjct: 93 LKLMISGTI-------------------AAPASPDEWREPCSTVSAPKALQFEECRRVSV 133
Query: 145 TGIKSVDSRYFHINILGCYNLKLNDLKI----------------TAHAD----------- 177
GI + FH+ C ++K + L++ T HA
Sbjct: 134 QGITMQNGPQFHLMFTRCTDVKASFLRVVAPESSPNTDGIHLNDTTHAQIMDNLISTGDD 193
Query: 178 ------SSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTW 231
+ D+ V ++ CGPG GIS+GSLGK + + + V C T T+NGVR+K+W
Sbjct: 194 CVSMVGNCSDVRVKDISCGPGHGISIGSLGKNRTTDRIENVRVDTCLLTNTTNGVRIKSW 253
Query: 232 PDSHIGIASNFTFEDIVMNNVENPIVIDQLYC--PYNKCNIKPKDSMPNIEIGN------ 283
+G A N FE IVM NV NPI+IDQ YC P N + IE
Sbjct: 254 -QGGMGYAHNLRFEGIVMKNVSNPIIIDQYYCDQPTPCANQTQAVEVRKIEFAGIRGTSA 312
Query: 284 ---------------RNLVYNGVNVK-VEGPETTSLCSNVKPTLFGKQIPATCV 321
R+L VN+ V G ++ C G +PA+C+
Sbjct: 313 TEQAIKLACSDAVPCRDLELRNVNLTMVGGGAASAFCHRASGKAAGAVVPASCL 366
>gi|78482998|dbj|BAE47457.1| endopolygalacturonase [Capsicum annuum]
Length = 312
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 139/312 (44%), Gaps = 60/312 (19%)
Query: 32 FGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQG 91
FGA DG TDD+KAF +W++A + + V+ YL+ F GPCK+ IS Q+ G
Sbjct: 1 FGAKGDGNTDDTKAFKQAWQDACSSNTPVNFVVQQNKNYLLKNIHFLGPCKSFISMQIFG 60
Query: 92 LLD----------------LFSIDTSLSLAKGTFHGQGETAWPLNQC--HKNSDCQ-LPT 132
L+ LF +L + G W N C +KN C+ PT
Sbjct: 61 TLEASDNMSDYNNDRRHWILFENVENLVVGGGGTINGNGNIWWQNSCKINKNLPCKDTPT 120
Query: 133 PIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-------------- 178
+ F N + +K +++ H++ C N++ ++L I + +S
Sbjct: 121 ALTFYNCNKLKVKNLKIKNAQQIHVSFETCTNVEASNLMINSPENSPNTDGIHVANTHNI 180
Query: 179 -------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTF 219
S+ + +++ CGPG GIS+GSLG G + + V F
Sbjct: 181 QISSATIGTGDDCISITSGSQKVHATDITCGPGHGISIGSLGSGNSEAHASDINVYGAKF 240
Query: 220 TCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNI 279
T+NG+R+KTW G ASN F+ I M VENPI+IDQ YC N D +
Sbjct: 241 YGTTNGLRIKTWQGGS-GSASNIKFQHIDMEGVENPIIIDQNYCDQN-------DPCKDQ 292
Query: 280 EIGNRNLVYNGV 291
++ +N+VY +
Sbjct: 293 QLKVKNVVYQNI 304
>gi|224124378|ref|XP_002330008.1| predicted protein [Populus trichocarpa]
gi|222871433|gb|EEF08564.1| predicted protein [Populus trichocarpa]
Length = 408
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 130/311 (41%), Gaps = 65/311 (20%)
Query: 20 IDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKY--LVSFAEF 77
I RV NV FGAV DG+TDD++AF +W A + + +L+ P Y ++ F
Sbjct: 15 IQRIARVYNVLSFGAVGDGVTDDTQAFKMAWDTACLQN--ESAILLAPDDYSFMIQPTIF 72
Query: 78 EGPCKASISFQLQGL-------------------LDLFSIDTSLSLAKGTFHGQGETAWP 118
GPCK S+ FQ+ G L + I+ G G+GE W
Sbjct: 73 TGPCKTSLVFQIDGTIMPPDGPESWPSKMNKRQWLVFYRINGMSMQGGGVIDGRGEKWWN 132
Query: 119 LN-QCHKNSD-------CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
L + HK + C P IRF ++ T+ G++ +S FH C N+ + L
Sbjct: 133 LPCKPHKGINGTTLPGPCDSPVAIRFFTSSNLTVQGLRVKNSPQFHFRFDNCQNVIVQML 192
Query: 171 KITAHADSS---------------------------------KDILVSEVFCGPGQGISV 197
I + A S ++ + + CGP GIS+
Sbjct: 193 SIKSPAQSPNTDGIHIENTYNVQIHYSVVSNGDDCVSIGAGCHNVDIKNITCGPSHGISI 252
Query: 198 GSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIV 257
GSLG V +TV + + NGVR+KTW + G S TF +I M V NPI+
Sbjct: 253 GSLGIRNSRACVSNITVTDSVIKNSDNGVRIKTWQGGY-GSVSKITFHNIHMETVRNPII 311
Query: 258 IDQLYCPYNKC 268
IDQ YC C
Sbjct: 312 IDQYYCQTRNC 322
>gi|449446684|ref|XP_004141101.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
gi|449489467|ref|XP_004158321.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
Length = 477
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 140/324 (43%), Gaps = 68/324 (20%)
Query: 11 VSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-K 69
S + R + + NV DFGA DG TDD+KAF ++W A N +G V VP G +
Sbjct: 69 TSLASKGRATNGGSGNFNVLDFGAKGDGETDDTKAFQSAWESACNVEG--SVVEVPSGSE 126
Query: 70 YLVSFAEFEGP-CKASISFQLQG-----------------LLDLFSIDTSLSLAKGTFHG 111
+LV F GP C+ +I FQL G ++ + GT G
Sbjct: 127 FLVGPISFSGPNCQPNIMFQLDGKIIAPTSPSAWGSGMLQWIEFTKLKGITVKGTGTIDG 186
Query: 112 QGETAW---PL-NQCHKNSDCQ---------LPTPIRFNFLNDSTITGIKSVDSRYFHIN 158
QG W P N KN D + PT +RF ++ T++GI +S+ H+
Sbjct: 187 QGSVWWNDSPTDNPTDKNLDKESSGGELPSTKPTALRFYGSDEVTVSGITIQNSQKAHLK 246
Query: 159 ILGCYNLKLNDLKITAHADS---------------------------------SKDILVS 185
C ++++ L I++ DS S + +
Sbjct: 247 FDSCTAVQVSSLTISSPGDSPNTDGIHLQNSQNVIISNSNIACGDDCISIQTGSSGVYIH 306
Query: 186 EVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFE 245
V CGPG GIS+G LG+ V +TVR+ T NGVR+KTW G+ F
Sbjct: 307 NVNCGPGHGISIGGLGRDDTKACVSNVTVRDVKLQNTMNGVRIKTWQGGS-GLVQGILFS 365
Query: 246 DIVMNNVENPIVIDQLYCPYNKCN 269
+I + +V+ PI+IDQ YC +C+
Sbjct: 366 NIQVTDVQTPIMIDQYYCDGGRCH 389
>gi|357113394|ref|XP_003558488.1| PREDICTED: polygalacturonase-like [Brachypodium distachyon]
Length = 429
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 142/326 (43%), Gaps = 68/326 (20%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
V +V D+GA A D ++AF +W+EA N LVP GK Y + F GPC+A+
Sbjct: 54 VFDVDDYGASAG--NDATEAFLRAWKEACNSSSDPSLFLVPGGKTYRLMPVSFTGPCRAT 111
Query: 85 -ISFQLQGLLDLFS---------------------IDTSLSLAKGTFHGQGETAWPLNQC 122
I+ ++G L+ S +D + GT +G G W +N C
Sbjct: 112 TITAMIKGTLEAPSNRSVWLDRPSDLSERWIAFEDVDHLHVMGGGTINGNGHEWW-INSC 170
Query: 123 HKNSD---CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----- 174
N + PT + F + ++ DS H+ I + + ++ L +TA
Sbjct: 171 KVNKTMPCVRGPTALYFQSCEHLVVEDLQVRDSMQMHVVIAYSWKVLVSRLFVTAPGWSP 230
Query: 175 -----HADSSKDILVSE-----------------------VFCGPGQGISVGSLGKGIKD 206
H +S+D+L+S +FCGPG GIS+GSLG
Sbjct: 231 NTDGIHVSNSRDVLISSCIISTGDDCISIVSGSAFVRATGIFCGPGHGISIGSLGANKSW 290
Query: 207 EEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYN 266
V + V T T+NGVR+KTW G A TF+DI M NV NPI+IDQ N
Sbjct: 291 AHVSDVLVEKATLVGTTNGVRIKTWQGGQ-GFAERITFQDIKMYNVTNPIIIDQ-----N 344
Query: 267 KCNIKPKDSMPNIEIGNRNLVYNGVN 292
C+ K S + RN+ Y+ ++
Sbjct: 345 YCDSKTPCSEQESAVAIRNIRYSSIH 370
>gi|258640138|gb|ACV85695.1| ripening-induced polygalacturonase 2 [Carica papaya]
Length = 494
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 139/303 (45%), Gaps = 58/303 (19%)
Query: 14 ITSVRGIDATNRVLNVKDFGAVADGITDDSK-AFDTSWREAWNWDGIKGTVLVPPGK-YL 71
I +R + + NV DFGA DGI DD++ F+ +W +A ++ G LVP + YL
Sbjct: 104 IEDLRSAKPRSVIFNVDDFGAEGDGIHDDTQQVFEEAWEKACSYKG-PALFLVPERRTYL 162
Query: 72 VSFAEFEGPCKASISFQLQ-------------------GLLDLFSIDTSLSLAKGTFHGQ 112
+ F GPCK+++ Q+Q + + S+D L GT HG
Sbjct: 163 IGPIRFLGPCKSNLVIQVQISGTILASDNRSDYRKDPRHWIVIDSVDNLLVEGGGTIHGN 222
Query: 113 GETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKI 172
G+ W N C + C+ + F + + +K D++ ++ C + +DL +
Sbjct: 223 GQIWW-RNSC--KAPCKEAPTVTFYKCKNLMVRNVKVQDAQQMQVSFEKCSEVTASDLTV 279
Query: 173 TA----------HADSSKDILVSEVF----------------------CGPGQGISVGSL 200
TA H ++++IL++ F CGPG GI+V SL
Sbjct: 280 TAPEKSPNTDGIHVTNTQNILITNTFIGGDDCISIESGSHNVQIEELTCGPGHGINVDSL 339
Query: 201 GKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQ 260
G V +TV + T+NGVR+KT+ G ASN F+++ M NV+NPI+IDQ
Sbjct: 340 GDNNSKAFVSFVTVNGAKLSGTTNGVRIKTYQGGS-GSASNIKFQNVDMENVKNPIIIDQ 398
Query: 261 LYC 263
YC
Sbjct: 399 NYC 401
>gi|449461705|ref|XP_004148582.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
Length = 483
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 132/305 (43%), Gaps = 64/305 (20%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSW-----REAWNWDGIKGTVLVPPG-KYLVSFAEFEGP 80
+V+ FGA+ DG DD+ AF +W R + + G +LVP G +++ F GP
Sbjct: 85 FDVRHFGAIGDGTADDTAAFKMAWDTACQRNDDDNNDDYGVILVPYGFSFMIQSTIFTGP 144
Query: 81 CKASISFQLQGLLD------------------LFSIDTSLSL-AKGTFHGQGETAWPLN- 120
CK + FQ+ G L +F ++SL G G+G+ W L
Sbjct: 145 CKNGVVFQVDGTLMAPDGPDAWPKGYSAHQWLVFYRVYNMSLQGNGLIDGRGQKWWDLPC 204
Query: 121 QCHKNSD----CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 176
+ HK C P IRF ++ + G++ DS FH C ++ ++ L IT+ A
Sbjct: 205 KPHKGKTMTGPCDSPIAIRFFMSSELRVEGVRIKDSPQFHFRFDNCKDVYIDSLHITSPA 264
Query: 177 DS---------------------------------SKDILVSEVFCGPGQGISVGSLGKG 203
S S ++ + + CGPG GIS+GSLG
Sbjct: 265 LSPNTDGIHIENTNGVQIFNSIVANGDDCVSIGSGSFNVEIRNITCGPGHGISIGSLGNH 324
Query: 204 IKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
V +TVR+ + NGVR+KTW G +F +I M+NV NPI+IDQ YC
Sbjct: 325 NSRACVSNITVRDSIIKVSDNGVRIKTW-QGGFGTVRGVSFNNINMDNVRNPIIIDQFYC 383
Query: 264 PYNKC 268
C
Sbjct: 384 LNKGC 388
>gi|449511515|ref|XP_004163976.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
Length = 483
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 132/305 (43%), Gaps = 64/305 (20%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSW-----REAWNWDGIKGTVLVPPG-KYLVSFAEFEGP 80
+V+ FGA+ DG DD+ AF +W R + + G +LVP G +++ F GP
Sbjct: 85 FDVRHFGAIGDGTADDTAAFKMAWDTACQRNDDDNNDDYGVILVPYGFSFMIQSTIFTGP 144
Query: 81 CKASISFQLQGLLD------------------LFSIDTSLSL-AKGTFHGQGETAWPLN- 120
CK + FQ+ G L +F ++SL G G+G+ W L
Sbjct: 145 CKNGVVFQVDGTLMAPDGPDAWPKGYSAHQWLVFYRVYNMSLQGNGLIDGRGQKWWDLPC 204
Query: 121 QCHKNSD----CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 176
+ HK C P IRF ++ + G++ DS FH C ++ ++ L IT+ A
Sbjct: 205 KPHKGKTMTGPCDSPIAIRFFMSSELRVEGVRIKDSPQFHFRFDNCKDVYIDSLHITSPA 264
Query: 177 DS---------------------------------SKDILVSEVFCGPGQGISVGSLGKG 203
S S ++ + + CGPG GIS+GSLG
Sbjct: 265 LSPNTDGIHIENTNGVQIFNSIVANGDDCVSIGSGSFNVEIRNITCGPGHGISIGSLGNH 324
Query: 204 IKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
V +TVR+ + NGVR+KTW G +F +I M+NV NPI+IDQ YC
Sbjct: 325 NSRACVSNITVRDSIIKVSDNGVRIKTW-QGGFGTVRGVSFNNINMDNVRNPIIIDQFYC 383
Query: 264 PYNKC 268
C
Sbjct: 384 LNKGC 388
>gi|449436767|ref|XP_004136164.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
Length = 334
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 127/262 (48%), Gaps = 45/262 (17%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKAS 84
+V N+ GA ADG TD ++AF +W +A + G V+ PPG +L + GPC
Sbjct: 65 KVFNIIAHGAKADGRTDSTQAFMQAWVKACHSSG-PAKVVFPPGTFLTGPLVYAGPCDGP 123
Query: 85 ISFQLQGLLD--------------LFSIDTSLSL-AKGTFHGQGETAWPLNQCHKNSD-C 128
++ ++QG + LF T L+L +GTF GQ P N N+D
Sbjct: 124 MTVEIQGTVKATTDISQYSSAEWILFESVTGLNLIGRGTFDGQ---VAPGNS--PNTDGV 178
Query: 129 QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSSKDILVSEVF 188
+ N N TG V +G + +N L IT
Sbjct: 179 HISQTDVVNVTNSIIGTGDDCVS--------IGHGSTNINVLNIT--------------- 215
Query: 189 CGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIV 248
CGPG GISVGSLGK ++EV G+ V NCT T+NGVR+KTW S G A+ TF++IV
Sbjct: 216 CGPGHGISVGSLGKYRDEKEVRGIFVSNCTIRNTTNGVRIKTWAASPPGQATRITFQNIV 275
Query: 249 MNNVENPIVIDQLYCPYNKCNI 270
++ V NPI+IDQ Y K ++
Sbjct: 276 LDKVRNPIIIDQNYGSKTKKSV 297
>gi|225432118|ref|XP_002263668.1| PREDICTED: polygalacturonase At1g48100-like [Vitis vinifera]
Length = 477
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 132/304 (43%), Gaps = 64/304 (21%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
V +V FGAV DG TDD+ AF +W+ A + G VLVP ++++ F GPCK
Sbjct: 82 VFDVTSFGAVGDGTTDDTAAFMEAWKAACAVE--SGIVLVPADHVFMITSTIFSGPCKPG 139
Query: 85 ISFQLQGLLD-------------------LFSIDTSLSLAKGTFHGQGETAWPLN-QCHK 124
+ FQ+ G+L + +D GT G G W L + H+
Sbjct: 140 LVFQVDGVLMPPNGPDCWPKSDSKKQWLVFYRLDQMTFTGSGTIEGNGGDWWELPCKPHR 199
Query: 125 NSD-------CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA--- 174
+ C P IRF ++ ++ ++ +S FH+ GC + + L I++
Sbjct: 200 GPNGSTLPGPCDSPALIRFFMSSNLVVSSLRIQNSPQFHMKFDGCEGVLIEKLSISSPKL 259
Query: 175 -------HADSSK-----------------------DILVSEVFCGPGQGISVGSLGKGI 204
H +++K D+ + V CGP GIS+GSLG
Sbjct: 260 SPNTDGIHIENTKSVGIYNSEIGNGDDCISIGRGCSDVNIEGVTCGPSHGISIGSLGVQN 319
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
V +TVRN + NGVR+KTW G S +FE+I M NV N ++IDQ YC
Sbjct: 320 SQACVSNITVRNVFIKDSDNGVRIKTW-QGGTGSVSGISFENIQMENVRNCMIIDQYYCL 378
Query: 265 YNKC 268
C
Sbjct: 379 SKAC 382
>gi|357512927|ref|XP_003626752.1| Polygalacturonase [Medicago truncatula]
gi|355520774|gb|AET01228.1| Polygalacturonase [Medicago truncatula]
Length = 371
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 146/313 (46%), Gaps = 66/313 (21%)
Query: 7 FSLLVSFI----TSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGT 62
F L++SFI + + TN + NV +GA DG TDDS+AF ++ A G+ T
Sbjct: 7 FILILSFILPCLCTRLNVGTTNAIYNVMQYGAHGDGKTDDSQAFINAFNSACKATGMS-T 65
Query: 63 VLVPPGK-YLVSFAEFEGPCKASISFQLQGLLDL------------FSIDTSLSL----- 104
+++P GK ++VS F G C A + QL+G + F+I+ L
Sbjct: 66 LVIPAGKTFMVSKVIFSGRCNAKVRIQLEGQIVAPSKANSKAQSYWFTIEYVNGLTIDGN 125
Query: 105 AKGTFHGQGETAWPLNQCHKNSDCQLP--TPIRFNFLNDSTITGIKSVDSRYFHINILGC 162
+G G G T W S + P + F+ ND +++ ++ +S H++I C
Sbjct: 126 GQGGLDGDGSTWWE-------SGGERPGVQALLFHSCNDLSVSNLRITNSPSSHVSINMC 178
Query: 163 YNLKLNDLKITAHADS----------SKDIL-----------------------VSEVFC 189
+ + I + A S S DI V+ V C
Sbjct: 179 NRTTFSHVSINSPATSPNTDGFDISFSTDIRIENSNIKSGDDCIAVNGGSNFINVTGVTC 238
Query: 190 GPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVM 249
GPG GISVGSLGK +++V + VRNCTF T NG R+KT P G A + T++ I++
Sbjct: 239 GPGHGISVGSLGKKRTNDQVSDVHVRNCTFKETQNGARIKTVPGGS-GYARHITYDQIIL 297
Query: 250 NNVENPIVIDQLY 262
NV+N I+IDQ Y
Sbjct: 298 VNVKNSIIIDQYY 310
>gi|302770853|ref|XP_002968845.1| hypothetical protein SELMODRAFT_12909 [Selaginella moellendorffii]
gi|300163350|gb|EFJ29961.1| hypothetical protein SELMODRAFT_12909 [Selaginella moellendorffii]
Length = 376
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 146/292 (50%), Gaps = 62/292 (21%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKASI 85
N++D+GA DG+TDD++A + +W++A T+L+P GK +L++ +GPCK +
Sbjct: 3 FNLQDYGAKGDGVTDDTQALERAWQDACK--SPDATLLIPGGKTFLIAQVSLQGPCKPNT 60
Query: 86 SFQLQG-----------------LLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHK---N 125
+++G + + +++ A GT G G T+W C +
Sbjct: 61 KIRIEGNIHAPDASSWSNSNSAPWIQIKNLEGLKVEATGTLDGNG-TSWWSRACKPTPGS 119
Query: 126 SDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA---------- 174
+ C+ PT I FN + + + G++ V+S H+N GC ++ L+I +
Sbjct: 120 TSCRKAPTSIEFNTVKNLRVNGLEVVNSPRMHVNFNGCQHVAAQWLRINSPGNSPNTDGI 179
Query: 175 HADSSKDIL-----------------------VSEVFCGPGQGISVGSLGKGIKDEEVVG 211
H +S+D++ VS + CGPG GIS+GSL + V G
Sbjct: 180 HITNSQDVVIKYAMVAAGDDCVSIVGGSSNIDVSSIVCGPGHGISIGSL---GGGDVVSG 236
Query: 212 LTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
+ VRN T+NGVR+K++ + H G S+ +FED+ M+ V NPI+IDQ YC
Sbjct: 237 VRVRNANLIGTTNGVRIKSYKNGH-GAVSDVSFEDVRMDEVANPIIIDQAYC 287
>gi|356524988|ref|XP_003531109.1| PREDICTED: polygalacturonase At1g48100-like [Glycine max]
Length = 484
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 138/308 (44%), Gaps = 64/308 (20%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGP 80
+++ V +V+ FGAV DG DD++AF +W+ A D G VL P + ++ F GP
Sbjct: 84 SSDCVFDVRSFGAVGDGCADDTRAFRAAWKAACAVD--SGIVLAPENYSFKITSTIFSGP 141
Query: 81 CKASISFQLQGLLD-------------------LFSIDTSLSLAKGTFHGQGETAWPLN- 120
CK + FQ+ G L + +D GT G G+ W L
Sbjct: 142 CKPGLVFQVDGTLMAPDGPNSWPEADSRNQWLVFYRLDQMTLNGTGTIEGNGDKWWDLPC 201
Query: 121 QCHKNSD-------CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKIT 173
+ H+ + C P IRF ++ + G+K +S FH+ GC + ++ L I+
Sbjct: 202 KPHRGPNGKTLSGPCGSPAMIRFFMSSNLKVKGLKIQNSPQFHMIFNGCQGVLIDKLSIS 261
Query: 174 A----------HADSSK-----------------------DILVSEVFCGPGQGISVGSL 200
+ H ++SK ++ ++ + CGP GIS+GSL
Sbjct: 262 SPKLSPNTDGIHVENSKYVGIYNSMISNGDDCISIGPGSSNVDIAGLTCGPSHGISIGSL 321
Query: 201 GKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQ 260
G V LTVR+ + NG+R+KTW +G S+ FE+I M NV N I+IDQ
Sbjct: 322 GVHNSQACVSNLTVRDSIIRESDNGLRIKTW-QGGMGSVSSLRFENIQMENVGNCIIIDQ 380
Query: 261 LYCPYNKC 268
YC +C
Sbjct: 381 YYCLSKEC 388
>gi|122894108|gb|ABM67700.1| polygalacturonase [Citrus sinensis]
Length = 445
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 133/295 (45%), Gaps = 56/295 (18%)
Query: 23 TNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCK 82
+ RV+ V DFGA DG DD++AF +W++A ++ V +L+ + GPCK
Sbjct: 51 SKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCK 110
Query: 83 ASISFQLQGLL------DLFS------------IDTSLSLAKGTFHGQGETAWPLNQCHK 124
+ ++ ++ G + D++ ++ GT +G G+ W C
Sbjct: 111 SRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWS-RSCKI 169
Query: 125 NSD--CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--- 178
N+ C+ PT I F+ + + ++ V+S+ HI C + +++L++ A A+S
Sbjct: 170 NTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNT 229
Query: 179 ------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEE 208
S I + CGPG GIS+GSLGK
Sbjct: 230 DGIHISASRGVEVKNSIVGTGDDCISIVGNSSLIRIRNFACGPGHGISIGSLGKSNSSVR 289
Query: 209 VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
+ + V + T NGVR+KTW G A+N F D++M NV NPI+IDQ YC
Sbjct: 290 IHDIMVYGALISNTQNGVRIKTWQGGS-GSATNIQFLDVLMKNVSNPIIIDQYYC 343
>gi|356557253|ref|XP_003546932.1| PREDICTED: probable polygalacturonase At1g80170-like [Glycine max]
Length = 443
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 132/293 (45%), Gaps = 58/293 (19%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
VL+V D+GA DG+ +D++AF +W+ A + G +V+ P GK +LV + GPC++
Sbjct: 50 VLSVGDYGAKGDGLHNDTEAFLEAWKIACSLSGFI-SVVFPYGKTFLVHPVDIGGPCRSK 108
Query: 85 ISFQLQG------------------LLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNS 126
I+ ++ G L ++ G +G G+ W C NS
Sbjct: 109 ITLRISGTIVAPQDPVVWHGLNQRKWLYFHGVNHLTVDGGGRINGMGQEWWA-RSCKINS 167
Query: 127 D--CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----- 178
C PT + F+ D + + ++S+ H++ C + + LK+ A A S
Sbjct: 168 TNPCHPAPTAMTFHRCKDLKVRNLMLINSQRMHLSFTNCMRIVASHLKVLAPAFSPNTDG 227
Query: 179 ----------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVV 210
S + + + CGPG GIS+GSLGK K E+V
Sbjct: 228 IHISATKGVEVRDSVIRTGDDCISIVRNSSRVWIRNISCGPGHGISIGSLGKSKKWEKVQ 287
Query: 211 GLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
+ V T NGVR+KTW G AS TF+ I+M NV NPI++DQ YC
Sbjct: 288 NVIVDGVYLYNTDNGVRIKTWQGGS-GFASKITFQHILMENVSNPIIVDQYYC 339
>gi|357132729|ref|XP_003567981.1| PREDICTED: probable polygalacturonase At1g80170-like [Brachypodium
distachyon]
Length = 410
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 154/386 (39%), Gaps = 86/386 (22%)
Query: 19 GIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEF 77
G +L + DFGAV DGI +D++AF A + + VP GK Y + +
Sbjct: 22 GTGEARVLLTLDDFGAVGDGIANDTQAF-LDAWAAACASAEQAVLAVPAGKFYRIWPVQL 80
Query: 78 EGPCKASISFQLQGL------------------LDLFSIDTSLSLAKG-TFHGQGETAWP 118
GPCK + + G L ++ +D LSL+ G T G G+ W
Sbjct: 81 AGPCKEKLKLLIAGTVVAPASPDEWAGRDPTKWLYIYGVD-GLSLSGGGTIDGAGKEWWA 139
Query: 119 LN-QCHKNSDCQL---PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA 174
+ + K C P + F ++ G+ + + FH+ C ++K N L++ A
Sbjct: 140 RSCKRKKTQPCNTRPPPKAVHFEECRGVSVQGLTLQNGQQFHLTFTRCIDVKANFLRVIA 199
Query: 175 HADSS---------------------------------KDILVSEVFCGPGQGISVGSLG 201
ADS + V ++ CGPG GIS+GSLG
Sbjct: 200 PADSPNTDGIHLNDSSRVQIMDNLISTGDDCVSMVGNCSHVRVEDISCGPGHGISIGSLG 259
Query: 202 KGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQL 261
K + V + V C T T+NGVR+K+W +G A N FE IVM NV NPI+IDQ
Sbjct: 260 KNRTTDRVENVRVDTCLLTNTTNGVRIKSW-QGGMGSAYNLRFEGIVMKNVSNPIIIDQY 318
Query: 262 YC--PYNKCNIKPKDSMPNIE---------------------IGNRNLVYNGVNVKVEG- 297
YC P N + +E + R L VN+ VEG
Sbjct: 319 YCDQPTPCANQTQAVEVRKVEFVDVRGTSATAQAIKMACSDAVPCRELELKNVNLTVEGG 378
Query: 298 --PETTSLCSNVKPTLFGKQIPATCV 321
T+ C G +P +C+
Sbjct: 379 GAAPATAFCYKAYGKTVGTVVPGSCL 404
>gi|414881282|tpg|DAA58413.1| TPA: polygalacturonase [Zea mays]
Length = 542
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 136/307 (44%), Gaps = 67/307 (21%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGP-CKA 83
V NV DFGA DG+TDD+KAF +W A T+LVPP ++LV F GP CK
Sbjct: 143 VFNVVDFGAKGDGVTDDTKAFQGAWAAACTQGA--STLLVPPELEFLVGPISFSGPYCKP 200
Query: 84 SISFQLQGL-----------------LDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNS 126
+I FQL+G L+ ++ + G +G+G+ W +
Sbjct: 201 NIVFQLEGTILAPISAKSWGSGLLQWLEFTKLNGIVIQGNGIINGRGQQWWTYSDPEDED 260
Query: 127 DCQL------------PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA 174
D PT +RF + ++GI V+S H+ C + ++D+ I++
Sbjct: 261 DDDTYHVEFQRMPQIKPTALRFYGSFNVVVSGITIVNSSQCHLKFDNCQGVMVHDVTISS 320
Query: 175 ----------HADSSKDILVSE-----------------------VFCGPGQGISVGSLG 201
H +SKD+ + V CGPG GIS+G LG
Sbjct: 321 PENSLNTDGIHLQNSKDVSIHHTTLACGDDCISIQTGCSNINIHNVNCGPGHGISIGGLG 380
Query: 202 KGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQL 261
+ V +TVR+ T NGVR+KTW +G+ + F +I ++ V+ PI+IDQ
Sbjct: 381 RDNTKACVSNVTVRDVNMFRTMNGVRIKTW-QGGVGLVQDIRFSNIQVSEVQTPIIIDQF 439
Query: 262 YCPYNKC 268
YC + C
Sbjct: 440 YCDRSTC 446
>gi|224120760|ref|XP_002318410.1| predicted protein [Populus trichocarpa]
gi|222859083|gb|EEE96630.1| predicted protein [Populus trichocarpa]
Length = 189
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 98/178 (55%), Gaps = 38/178 (21%)
Query: 177 DSSKDILVSEVFCGPGQGISVGSLGKGI---KDEEVVGLTVRNCTFTCTSNGVRVKTWPD 233
+ + ++ +++VFCGPG GI GS+G+ K + +VGLTVRNCTF TS+GVR+KTW
Sbjct: 16 NGTANVNITQVFCGPGHGIGAGSMGENTSLDKKDILVGLTVRNCTFANTSDGVRIKTWES 75
Query: 234 SHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSM----------------- 276
H G+AS FT+EDI M+ V++PI IDQ YCP+ C+ + +
Sbjct: 76 PHEGVASGFTYEDITMDGVQHPINIDQHYCPFPLCDTRTPSHIQLKILYTITLGVTSKLR 135
Query: 277 -------------PNIEIGNRNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 321
NI + + NLVY G EGP +LCSN+ +L G Q P +C+
Sbjct: 136 TAVSLNCSSVHPCENIVLTDINLVYKG----KEGP-AIALCSNIHGSLSGIQKPPSCL 188
>gi|8778527|gb|AAF79535.1|AC023673_23 F21D18.18 [Arabidopsis thaliana]
Length = 492
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 135/321 (42%), Gaps = 81/321 (25%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
V +V FGAV DG DD+ AF +W+ A + G VL P G + ++ F GPCK
Sbjct: 79 VFDVTSFGAVGDGSCDDTAAFQDAWKAACAVE--SGVVLAPEGGVFKITSTIFSGPCKPG 136
Query: 85 ISFQLQGLLD-------------------LFSIDTSLSLAKGTFHGQGETAWPLN-QCHK 124
+ FQL G+L + +D KGT G G+ W L + H+
Sbjct: 137 LVFQLDGVLMPPDGPEEWPEKDNKNQWLVFYRLDGFTFSGKGTVEGNGQKWWDLPCKPHR 196
Query: 125 NSD-------CQLPT-----------------PIRFNFLNDSTITGIKSVDSRYFHINIL 160
D C PT IRF N+ + G++ +S FH+
Sbjct: 197 GPDGSSSSGPCASPTVSLLKPNQIIKLDRFYLMIRFFMSNNIEVKGLRIQNSPQFHMKFD 256
Query: 161 GCYNLKLNDLKITA----------HADSSK-----------------------DILVSEV 187
GC + +N+++I++ H +++ D+ + V
Sbjct: 257 GCQGVLINEIQISSPKLSPNTDGIHLGNTRSVGIYNSVVSNGDDCISIGTGCSDVDIQGV 316
Query: 188 FCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDI 247
CGP GIS+GSLG V +TVRN + NG+RVKTW G SN FE+I
Sbjct: 317 TCGPSHGISIGSLGVHNSQACVSNITVRNTVIRDSDNGLRVKTW-QGGTGSVSNLLFENI 375
Query: 248 VMNNVENPIVIDQLYCPYNKC 268
M NV N I++DQ YC C
Sbjct: 376 QMENVLNCIIVDQYYCQSKDC 396
>gi|224117782|ref|XP_002331630.1| predicted protein [Populus trichocarpa]
gi|222874026|gb|EEF11157.1| predicted protein [Populus trichocarpa]
Length = 396
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 142/292 (48%), Gaps = 57/292 (19%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCK-ASIS 86
+V +GA DG TD +KAF +W +A T+ VP G + + F+GPCK +I
Sbjct: 33 SVLSYGAKPDGKTDSTKAFAAAWAQACA-STQPATISVPKGSFSLGQVRFQGPCKNRAIL 91
Query: 87 FQLQGLLD---------------LFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLP 131
++ G L +F ++++ GT GQG W KNS P
Sbjct: 92 VRIDGTLVAPSDYKVIGNAKNWLMFEHVNGVTVSGGTLDGQGAGLWSC----KNSGKGCP 147
Query: 132 ---TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADS 178
T + F+ N+ ITG+ S++S+ FHI I GC N+K+ +K++A H S
Sbjct: 148 RGATSLEFSNSNNIAITGLASLNSQLFHIVINGCQNVKVQGVKVSAAGSSPNTDGIHVQS 207
Query: 179 SKDIL-----------------------VSEVFCGPGQGISVGSLGKGIKDEEVVGLTVR 215
S + + V CGPG GIS+GSLGK ++ V +TV+
Sbjct: 208 STGVTILNSRIGTGDDCVSIGPGTSSLWIENVACGPGHGISIGSLGKESQEAGVQNVTVK 267
Query: 216 NCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
TFT T NG+R+K+W G A + F+ VMNNV+NPIVIDQ YCP K
Sbjct: 268 TTTFTGTENGLRIKSWGRPSNGFARDILFQHAVMNNVQNPIVIDQNYCPGEK 319
>gi|357462815|ref|XP_003601689.1| hypothetical protein MTR_3g084360 [Medicago truncatula]
gi|355490737|gb|AES71940.1| hypothetical protein MTR_3g084360 [Medicago truncatula]
Length = 400
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 148/321 (46%), Gaps = 66/321 (20%)
Query: 1 LLLAARFSLLVSFITSVRGIDA---TNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWD 57
L + SL VS I+ R ++ + NV ++GA D TDDS AF +W+E
Sbjct: 4 LFVLYLMSLFVSPISCFRLVNRKPLAQKSFNVVNYGAKGDSNTDDSNAFLKAWQEVCGST 63
Query: 58 GIKGTVLVPPGK-YLVSFAEFEGPCKAS-ISFQLQGLL-----------DLFSIDTSLSL 104
T+++P GK +++ + F+GPCK+S + + G + D D +S
Sbjct: 64 QGTPTLIIPGGKKFMLQPSSFQGPCKSSTVKVMMMGTIIAPQSSGKWKWDSRDDDAWISF 123
Query: 105 A---------KGTFHGQGETAWPLNQCHKN-SDCQLPTPIRFNFLNDSTITGIKSVDSRY 154
+ +GTF GQG + W KN +D PT ++F ++ + ++ +DS
Sbjct: 124 SHIKGLIISGEGTFDGQGASWW------KNYNDHGRPTALQFLGCDNLKLGPLRHIDSPK 177
Query: 155 FHINILGCYNLKLNDLKITAHADS---------------------------------SKD 181
HI+I+ C ++ L I A +S SK
Sbjct: 178 NHISIVDCNGALISHLHIIAPENSPNTDGIDISRSTNIIIEHSTISTGDDCIAINSGSKF 237
Query: 182 ILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASN 241
I ++ + CGPG GISVGSLGK K V + V + FT T NG R+KTW + G A
Sbjct: 238 INITAINCGPGHGISVGSLGKDGKYATVEEVHVSHSIFTGTENGARIKTWT-AGTGYARK 296
Query: 242 FTFEDIVMNNVENPIVIDQLY 262
T+EDI + V NPI+IDQ Y
Sbjct: 297 ITYEDITLIKVNNPIIIDQHY 317
>gi|307135968|gb|ADN33827.1| polygalacturonase [Cucumis melo subsp. melo]
Length = 610
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 136/312 (43%), Gaps = 62/312 (19%)
Query: 7 FSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP 66
+S V S RG + ++NV F AV DG+TDD+ AF +W A + K +LVP
Sbjct: 190 YSYTVPAWRSERG---SKILMNVDSFDAVGDGVTDDTMAFRKAWETACSTS--KSVLLVP 244
Query: 67 PGK-YLVSFAEFEGPCKASISFQLQGL------------------LDLFSIDTSLSLAKG 107
K YLV+ F+GPCK + Q++G L+ ++ + G
Sbjct: 245 KEKRYLVNATTFKGPCKDGMVIQIEGTIVAPDEPELWDPKFPRQWLEFTKLNAATFQGDG 304
Query: 108 TFHGQGETAWPLNQCHKNSD--CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYN 164
G GE W C KN C+ PT + ++ + G+ +S+ H I
Sbjct: 305 VIDGSGEKWWA-ESCKKNKSRPCKGAPTAFTIDSSSNIRVKGLTIQNSQQMHFTIARSET 363
Query: 165 LKLNDLKITAHADS---------------------------------SKDILVSEVFCGP 191
+++ +++++A DS S I + + CGP
Sbjct: 364 VRITEVRVSAPGDSPNTDGIHITQSTNVVVQNSKISTGDDCISIVNASSGIKMKGISCGP 423
Query: 192 GQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNN 251
G GIS+GSLGK V + + T+NGVR+KTW G + FE++ M +
Sbjct: 424 GHGISIGSLGKDNSTGIVTKVVLDTAFLRETTNGVRIKTWQGGS-GYVRSVRFENVRMED 482
Query: 252 VENPIVIDQLYC 263
VENPI+IDQ YC
Sbjct: 483 VENPIIIDQFYC 494
>gi|302784710|ref|XP_002974127.1| hypothetical protein SELMODRAFT_12908 [Selaginella moellendorffii]
gi|300158459|gb|EFJ25082.1| hypothetical protein SELMODRAFT_12908 [Selaginella moellendorffii]
Length = 376
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 144/291 (49%), Gaps = 60/291 (20%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKASI 85
N++D+GA DG+TDD++A + +W++A T+L+P GK +L++ +GPCK +
Sbjct: 3 FNLQDYGAKGDGVTDDTQALERAWQDACK--SPDATLLIPGGKTFLIAQVSLQGPCKPNT 60
Query: 86 SFQLQG-----------------LLDLFSIDTSLSLAKGTFHGQGETAW--PLNQCHKNS 126
+++G + + +++ A GT G G + W ++
Sbjct: 61 KIRIEGNIHAPDASSWSNSNSAPWIQIKNLEGLKVEATGTLDGNGASWWSRACKPTAGST 120
Query: 127 DCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------H 175
C+ PT I FN + + + G++ V+S H+N GC ++ L+I + H
Sbjct: 121 SCRKAPTSIEFNTVKNLRVNGLEVVNSPRMHVNFNGCQHVAAQWLRINSPGNSPNTDGIH 180
Query: 176 ADSSKDIL-----------------------VSEVFCGPGQGISVGSLGKGIKDEEVVGL 212
+S+D++ VS + CGPG GIS+GSL + V G+
Sbjct: 181 ITNSQDVVIKYVMVAAGDDCVSIVGGSSNIDVSSIVCGPGHGISIGSL---GGGDVVSGV 237
Query: 213 TVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
VRN T+NGVR+K++ + H G S+ +FED+ M+ V NPI+IDQ YC
Sbjct: 238 RVRNANLIGTTNGVRIKSYKNGH-GTVSDVSFEDVRMDEVANPIIIDQAYC 287
>gi|357462819|ref|XP_003601691.1| Polygalacturonase [Medicago truncatula]
gi|355490739|gb|AES71942.1| Polygalacturonase [Medicago truncatula]
Length = 404
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 143/312 (45%), Gaps = 58/312 (18%)
Query: 9 LLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG 68
++ S S R T +V +GA+ DG TDDS AF + +A ++ +P G
Sbjct: 11 VIASHSVSSRITPNTGSTFDVLTYGAIGDGQTDDSNAFLKVFNDACGTSESTPSMTIPEG 70
Query: 69 K-YLVSFAEFEGPCKAS-ISFQLQGLLDL--------FSIDTSLSL-------------A 105
K +L+ F+GPCK++ I +L+G + F+++ +
Sbjct: 71 KTFLLQPLVFKGPCKSTNIIVELKGNITAPKDIESWNFTVEKQRKIWIQFSKISGLVVNG 130
Query: 106 KGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNL 165
+G GQG W K + PT +RF T++ + ++S HI++ C N
Sbjct: 131 EGNIDGQGSPWWD-KFGGKGQEKFRPTALRFLDCQALTLSNLNHMNSPKNHISVDSCKNA 189
Query: 166 KLNDLKITAHADS---------------------------------SKDILVSEVFCGPG 192
+ ++ ITA S S I ++ FCGPG
Sbjct: 190 SIFNIHITAPPTSPNTDGIDISQSTNIAIMNSTIETGDDCIAINNGSSVITITGTFCGPG 249
Query: 193 QGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNV 252
GISVGSLGK V + V+NCTFT TSNG R+KT+ + G A N T+EDI++N V
Sbjct: 250 HGISVGSLGKDNSYATVEDVRVQNCTFTGTSNGGRIKTF-EGGSGYARNITYEDIILNEV 308
Query: 253 ENPIVIDQLYCP 264
+NP++IDQ Y P
Sbjct: 309 KNPVIIDQAYNP 320
>gi|73912507|dbj|BAB20805.2| polygalacturonase [Zinnia elegans]
Length = 443
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 139/323 (43%), Gaps = 62/323 (19%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK 60
LL A + I S T+ + NV +FGA DG TDD+KAF+ +W A +
Sbjct: 37 LLKEAFYPRYGETIPSSLPYGKTSSIFNVLNFGAKGDGTTDDTKAFEAAWLAACKLEA-- 94
Query: 61 GTVLVPPGK-YLVSFAEFEGP-CKASISFQLQG-----------------LLDLFSIDTS 101
T++VP G +L+ F GP C+++I FQL G L+ ++
Sbjct: 95 STMVVPKGSVFLIKPISFSGPDCESNIVFQLDGKIIAPKRSGSWESGLLQWLEFTKLNGI 154
Query: 102 LSLAKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILG 161
G GQG W + PT +RF D T+TGI +S+ H+
Sbjct: 155 TIRGTGVIDGQGSGWW-------SDSGTKPTAVRFYGSTDVTVTGITIQNSQQTHLKFDN 207
Query: 162 CYNLKLNDLKITAHADS----------SKDIL-----------------------VSEVF 188
C ++++ + +++ DS S+D+ + V
Sbjct: 208 CQSVQVFGVTVSSPGDSPNTDGIYLQNSQDVTIHSTKLACGDDCISIQTGCSGVNIQNVD 267
Query: 189 CGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIV 248
CGPG GIS+GSLGK V +TVR+ T GVR+KTW G TF +I
Sbjct: 268 CGPGHGISIGSLGKDNTRACVSNITVRDTKIHDTMTGVRIKTWQGGS-GAVQGVTFSNIQ 326
Query: 249 MNNVENPIVIDQLYCPYNKCNIK 271
++ VE I+IDQ YC KC K
Sbjct: 327 VSKVETAIIIDQFYCDGGKCQNK 349
>gi|413948023|gb|AFW80672.1| hypothetical protein ZEAMMB73_326479 [Zea mays]
Length = 766
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 134/299 (44%), Gaps = 62/299 (20%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPP-GKYLVSFAEFEGPCKAS 84
V +V+ FGA G +D++A +W+ A + + T+LVP G + +S F GPCK++
Sbjct: 365 VFDVRAFGASGSGSGNDTRALRAAWKAACSSNSTTPTLLVPSDGVFTISSTIFAGPCKSA 424
Query: 85 ISFQLQGLLD------------------LFSIDTSLSLA-KGTFHGQGETAWPLN-QCHK 124
++FQ+ G+L +F ++LA +GT G GE W L + H+
Sbjct: 425 VTFQIDGVLMPPDGPASWPASDSRKQWIVFYKANGMTLAGEGTIEGNGEEWWDLPCKPHR 484
Query: 125 NSD-------CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD 177
+ C P +RF ND T+ G++ +S FH+ C ++++ L + + A
Sbjct: 485 GPNGSTLPGPCDSPALVRFFLSNDVTVRGLRIENSPQFHLKFDDCERVRVDGLFVRSPAF 544
Query: 178 SS---------------------------------KDILVSEVFCGPGQGISVGSLGKGI 204
S D+ + + CG G GIS+GSLG
Sbjct: 545 SPNTDGVHVENTTSVQILNSRIYNGDDCVSIGAGCSDVRIENITCGHGHGISIGSLGVHG 604
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
V +TVRN + NGVR+KTW G + F + M NV+N I+IDQ YC
Sbjct: 605 TRACVSNITVRNARILDSDNGVRIKTW-QGGTGAVTAVEFAGVQMQNVKNCILIDQYYC 662
>gi|18378969|ref|NP_563654.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|9972390|gb|AAG10640.1|AC022521_18 Putative polygalacturonase [Arabidopsis thaliana]
gi|66792702|gb|AAY56453.1| At1g02460 [Arabidopsis thaliana]
gi|332189311|gb|AEE27432.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 491
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 138/312 (44%), Gaps = 65/312 (20%)
Query: 21 DATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKY--LVSFAEFE 78
D N + NV+ +GAV DG TDD++AF T+W + N + +VL+ P Y ++ F
Sbjct: 83 DDNNGIYNVRKYGAVGDGETDDTEAFKTAWDSSCNNENNTDSVLLVPYGYTFMIQSTIFT 142
Query: 79 GPCKASISFQLQGL-------------------LDLFSIDTSLSLAKGTFHGQGETAWPL 119
GPC++ FQ+ G L + ++ +G G+G+ W L
Sbjct: 143 GPCRSYQFFQVDGTIVTPDGPESWPSNISKRQWLVFYRVNGMALKGEGVIDGRGQKWWDL 202
Query: 120 N-QCHKNSD--------CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
+ H++ + C P +RF ++ + G++ +S FH GC + + L
Sbjct: 203 PCKPHRSVNKSAIVTGPCDSPIALRFFMSSNLRVEGLQIKNSPQFHFRFDGCQGVHVESL 262
Query: 171 KITA----------HADSSK-----------------------DILVSEVFCGP-GQGIS 196
ITA H ++S D+ + + CGP G GIS
Sbjct: 263 HITAPPLSPNTDGIHIENSNSVTIYNSIISNGDDCVSIGSGSYDVDIRNLTCGPGGHGIS 322
Query: 197 VGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPI 256
+GSLG V +TVR+ + NGVR+KTW G S TF +I +++V NPI
Sbjct: 323 IGSLGNHNSRACVSNITVRDSVIKYSDNGVRIKTWQGGS-GSVSGVTFNNIHVDSVRNPI 381
Query: 257 VIDQLYCPYNKC 268
+IDQ YC C
Sbjct: 382 IIDQYYCMTKDC 393
>gi|449478579|ref|XP_004155358.1| PREDICTED: probable polygalacturonase At1g80170-like [Cucumis
sativus]
Length = 610
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 135/312 (43%), Gaps = 62/312 (19%)
Query: 7 FSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP 66
+S V S RG + ++NV F A+ DG+TDD+ AF +W A + K +LVP
Sbjct: 190 YSYTVPVWRSERG---SKILMNVDSFDAIGDGVTDDTMAFRKAWETACSTS--KSVLLVP 244
Query: 67 PGK-YLVSFAEFEGPCKASISFQLQGL------------------LDLFSIDTSLSLAKG 107
K YLV+ F+GPCK + Q++G L+ ++ + G
Sbjct: 245 KDKTYLVNATTFKGPCKDGMVIQIEGTIVAPDEPELWDPKFPRQWLEFTKLNAATFQGDG 304
Query: 108 TFHGQGETAWPLNQCHKNSD--CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYN 164
G GE W C KN C+ PT + + ++ + G+ +S+ H I
Sbjct: 305 VIDGSGEKWWA-ESCKKNKSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSET 363
Query: 165 LKLNDLKITAHADS---------------------------------SKDILVSEVFCGP 191
+++ ++++A DS S I + + CGP
Sbjct: 364 VRITGVRVSAPGDSPNTDGIHITQSTNVVVQNCKISTGDDCISIVNASSGIKMKGISCGP 423
Query: 192 GQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNN 251
G GIS+GSLGK V + + T+NGVR+KTW G FE++ M +
Sbjct: 424 GHGISIGSLGKDNSTGIVTKVVLDTAYLRETTNGVRIKTWQGGS-GYVRAVRFENVRMED 482
Query: 252 VENPIVIDQLYC 263
VENPI+IDQ YC
Sbjct: 483 VENPIIIDQFYC 494
>gi|449434943|ref|XP_004135255.1| PREDICTED: probable polygalacturonase At1g80170-like [Cucumis
sativus]
Length = 610
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 135/312 (43%), Gaps = 62/312 (19%)
Query: 7 FSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP 66
+S V S RG + ++NV F A+ DG+TDD+ AF +W A + K +LVP
Sbjct: 190 YSYTVPVWRSERG---SKILMNVDSFDAIGDGVTDDTMAFRKAWETACSTS--KSVLLVP 244
Query: 67 PGK-YLVSFAEFEGPCKASISFQLQGL------------------LDLFSIDTSLSLAKG 107
K YLV+ F+GPCK + Q++G L+ ++ + G
Sbjct: 245 KEKTYLVNATTFKGPCKDGMVIQIEGTIVAPDEPELWDPKFPRQWLEFTKLNAATFQGDG 304
Query: 108 TFHGQGETAWPLNQCHKNSD--CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYN 164
G GE W C KN C+ PT + + ++ + G+ +S+ H I
Sbjct: 305 VIDGSGEKWWA-ESCKKNKSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSET 363
Query: 165 LKLNDLKITAHADS---------------------------------SKDILVSEVFCGP 191
+++ ++++A DS S I + + CGP
Sbjct: 364 VRITGVRVSAPGDSPNTDGIHITQSTNVVVQNCKISTGDDCISIVNASSGIKMKGISCGP 423
Query: 192 GQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNN 251
G GIS+GSLGK V + + T+NGVR+KTW G FE++ M +
Sbjct: 424 GHGISIGSLGKDNSTGIVTKVVLDTAYLRETTNGVRIKTWQGGS-GYVRAVRFENVRMED 482
Query: 252 VENPIVIDQLYC 263
VENPI+IDQ YC
Sbjct: 483 VENPIIIDQFYC 494
>gi|258640140|gb|ACV85696.1| ripening-induced polygalacturonase 3 [Carica papaya]
Length = 444
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 129/291 (44%), Gaps = 55/291 (18%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAE--FEGPCK 82
R++NV +GA A+G DDS+AF +WR A G VLV P + F GPCK
Sbjct: 74 RIVNVDRYGAKANG-RDDSQAFKKAWRAAC--LASNGAVLVVPRNKIYHLKPLIFSGPCK 130
Query: 83 ASISFQLQGLLDLFSIDT---------------SLSLAKGTFHGQGETAWPLNQCHKNSD 127
++++F++ G + + + +L + G W LN C N
Sbjct: 131 STLTFKIYGTIKAWVKQSEYRERRHWLRFDNVHNLRVTGGGIINGNGRKWWLNSCKINKK 190
Query: 128 --CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------- 178
C + + F ++ ++ I +S+ HI+ C +K +L +TA +S
Sbjct: 191 LVCLIKNAVTFYECSNLIVSNIWFQNSQKMHISFQSCLYVKALNLVVTAPENSPNTDGIH 250
Query: 179 --------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGL 212
SK++ + + CGPG GIS+GSLG + V +
Sbjct: 251 VTGTRNICLIRTGIELGDDCISIVSGSKNVRATGITCGPGHGISIGSLGADNSEAYVSNV 310
Query: 213 TVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
V N T T+NGVR+KTW G A N F +I M NV NPI+IDQ YC
Sbjct: 311 EVTNSKLTGTTNGVRIKTWQQGGSGFAKNIIFHNIEMKNVTNPIIIDQNYC 361
>gi|242037693|ref|XP_002466241.1| hypothetical protein SORBIDRAFT_01g004190 [Sorghum bicolor]
gi|241920095|gb|EER93239.1| hypothetical protein SORBIDRAFT_01g004190 [Sorghum bicolor]
Length = 455
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 168/379 (44%), Gaps = 89/379 (23%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
V ++ +GA DG DD++A +W+ A VLVP G+ YL+ GPCK++
Sbjct: 60 VFSLDRYGARGDGRHDDTRALAAAWKAACA-SPRPAAVLVPNGRRYLLKVVTLRGPCKST 118
Query: 85 ISFQLQGLL-------DLFSIDTSL-----SLAK------GTFHGQGETAWPLN-QCHKN 125
++ ++G L D D L S+ K G G G WP + + +K
Sbjct: 119 VAVTVKGTLVASPNRADWSDRDRRLWIVFRSINKLTLNGGGAIDGNGHKWWPYSCKINKG 178
Query: 126 SDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA---------- 174
C + PT + F++ + + +K V+S+ H+++ N++L L ITA
Sbjct: 179 LPCKEAPTALSFHYCTNLRVDNLKIVNSQQIHMSVEDSTNVQLAKLSITAPGTSPNTDGI 238
Query: 175 HADSSKDILV-----------------------SEVFCGPGQGISVGSLGKGIKDEEVVG 211
H SKD+ V S V CGPG GIS+GSLG +V G
Sbjct: 239 HITRSKDVRVTNCKIKTGDDCISIEDGTHKLHVSNVVCGPGHGISIGSLGDDNSRAQVSG 298
Query: 212 LTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK 271
+T+ + T+NG R+KT+ G A + TF++++M NV+NPI+IDQ YC K
Sbjct: 299 ITIDSVQLHGTTNGARIKTYQGGS-GYAKDITFQNMIMYNVKNPIIIDQNYCD----KAK 353
Query: 272 P-KDSMPNIEIGN--------------------------RNLVYNGVNVKVEGPE--TTS 302
P ++ ++I N + + +++K++G + T S
Sbjct: 354 PCREQRSAVQISNVVFKNIRGTTITKDAIKMHCSKNVPCQGITLQNIDLKMQGGKGNTES 413
Query: 303 LCSNVKPTLFGKQIPATCV 321
C N K +GK +P C
Sbjct: 414 TCQNAKWRKYGKVVPQPCT 432
>gi|224117722|ref|XP_002331615.1| predicted protein [Populus trichocarpa]
gi|222874011|gb|EEF11142.1| predicted protein [Populus trichocarpa]
Length = 396
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 141/292 (48%), Gaps = 57/292 (19%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCK-ASIS 86
+V +GA DG TD +KAF +W A T+ VP G + + F+GPCK +I
Sbjct: 33 SVLSYGAKPDGKTDSTKAFAAAWAHACA-STQPATISVPKGSFSLGQVRFQGPCKNRAIL 91
Query: 87 FQLQGLLD---------------LFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLP 131
++ G L +F ++++ GT GQG W KNS P
Sbjct: 92 VRIDGTLVAPSDYKVIGNAKNWLMFEHVNGVTVSGGTLDGQGAGLWSC----KNSGKGCP 147
Query: 132 ---TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADS 178
T + F+ N+ ITG+ S++S+ FHI I GC N+K+ ++++A H S
Sbjct: 148 RGATSLDFSNSNNIAITGLASLNSQLFHIVIHGCQNVKVQGVRVSAAGNSPNTDGIHVQS 207
Query: 179 SKDIL-----------------------VSEVFCGPGQGISVGSLGKGIKDEEVVGLTVR 215
S + + V CGPG GIS+GSLGK ++ V +TV+
Sbjct: 208 STGVTILNSRIGTGDDCVSIGPGTSSLWIENVACGPGHGISIGSLGKESQEAGVQNVTVK 267
Query: 216 NCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
TFT T NG+R+K+W G A + F+ VMNNV+NPIVIDQ YCP K
Sbjct: 268 TTTFTGTENGLRIKSWGRPSNGXARDILFQHAVMNNVQNPIVIDQNYCPGEK 319
>gi|357511459|ref|XP_003626018.1| Polygalacturonase [Medicago truncatula]
gi|355501033|gb|AES82236.1| Polygalacturonase [Medicago truncatula]
Length = 462
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 147/345 (42%), Gaps = 67/345 (19%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGPCKAS 84
+ +V+ FGA+ DGI DD+++F +W A +LVP G +++ F GPC+
Sbjct: 66 IFDVRSFGAIGDGIEDDTESFKMAWDTACQNGSDVNVILVPQGFSFVIQSTIFTGPCQGD 125
Query: 85 ISFQLQGLLD------------------LFSIDTSLSL-AKGTFHGQGETAWPLN-QCHK 124
+ F++ G + +F +SL G+ G+G+ W L + HK
Sbjct: 126 LIFKVDGTVLAPDGPESWPKNNSRRQWLVFYRMKGMSLEGSGSIDGRGQKWWDLPCKPHK 185
Query: 125 NSD------CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS 178
S+ C P IRF ++ T+ G+K +S F+ C N+ + + ITA S
Sbjct: 186 GSNGTALGTCDSPIAIRFFMSSNLTVKGLKVKNSPQFNFRFDACNNVHIESIYITAPKIS 245
Query: 179 ---------------------------------SKDILVSEVFCGPGQGISVGSLGKGIK 205
S D+ + + CGP GIS+GSLG
Sbjct: 246 PNTDGIHLEYANDVKIYNSVISNGDDCVSIGTGSYDVDIKNITCGPSHGISIGSLGNHNT 305
Query: 206 DEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPY 265
V +TVR+ + NG+R+KTW G S TF +I M +V NPI+IDQ YC
Sbjct: 306 KACVSNITVRDSIIKMSDNGIRIKTWQGGS-GSVSGVTFNNIHMISVRNPIIIDQYYCLT 364
Query: 266 NKCNIKPKD-SMPNIEIGNRNLVYNGVNVKVEGPETTSLCSNVKP 309
C K S+ NI N Y+ ++ P CS+ P
Sbjct: 365 KDCTNKTSAVSVSNILYTNIKGTYD-----IKSPPMHFACSDSVP 404
>gi|6624205|dbj|BAA88472.1| polygalacturonase [Cucumis sativus]
Length = 435
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 135/312 (43%), Gaps = 62/312 (19%)
Query: 7 FSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP 66
+S V S RG + ++NV F A+ DG+TDD+ AF +W A + K +LVP
Sbjct: 49 YSYTVPVWRSERG---SKILMNVDSFDAIGDGVTDDTMAFRKAWETACSTS--KSVLLVP 103
Query: 67 PGK-YLVSFAEFEGPCKASISFQLQGL------------------LDLFSIDTSLSLAKG 107
K YLV+ F+GPCK + Q++G L+ ++ + G
Sbjct: 104 KEKTYLVNATTFKGPCKDGMVIQIEGTIVAPDEPELWDPKFPRQWLEFTKLNAATFQGDG 163
Query: 108 TFHGQGETAWPLNQCHKNSD--CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYN 164
G GE W C KN C+ PT + + ++ + G+ +S+ H I
Sbjct: 164 VIDGSGEKWWA-ESCKKNKSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHFTIARSET 222
Query: 165 LKLNDLKITAHADS---------------------------------SKDILVSEVFCGP 191
+++ ++++A DS S I + + CGP
Sbjct: 223 VRITGVRVSAPGDSPNTDGIHITQSTNVVVQNCKISTGDDCISIVNASSGIKMKGISCGP 282
Query: 192 GQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNN 251
G GIS+GSLGK V + + T+NGVR+KTW G FE++ M +
Sbjct: 283 GHGISIGSLGKDNSTGIVTKVVLDTAYLRETTNGVRIKTWQGGS-GYVRAVRFENVRMED 341
Query: 252 VENPIVIDQLYC 263
VENPI+IDQ YC
Sbjct: 342 VENPIIIDQFYC 353
>gi|240254055|ref|NP_563875.6| Pectin lyase-like protein [Arabidopsis thaliana]
gi|332190491|gb|AEE28612.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 532
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 138/325 (42%), Gaps = 83/325 (25%)
Query: 24 NRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGP-C 81
++V NV DFGA DG DD+KAF+ +W A + +LVPP YLV F GP C
Sbjct: 116 SQVFNVMDFGAKGDGKCDDTKAFEAAWVAACKIEA--SVMLVPPEYTYLVGPISFSGPYC 173
Query: 82 KASISFQLQG-----------------LLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHK 124
+A+I FQL G +D + KG G+G W +
Sbjct: 174 QANIVFQLDGTIIAPTDSKTWGKGLMWWIDFTKLKGIKVQGKGVIDGRGSGWWQQDSPFI 233
Query: 125 NSDCQL----------------------------PTPIRFNFLNDSTITGIKSVDSRYFH 156
+SD +L PT +RF+ +TGI +S H
Sbjct: 234 DSDTKLIVPLNNSANQNPPMPIRSELDERMPSIKPTALRFSGSFGVEVTGITIQNSPQCH 293
Query: 157 INILGCYNLKLNDLKITAHADS----------SKDILV------------------SEVF 188
+ C + ++D+ +++ DS +KD+L+ S VF
Sbjct: 294 LKFDDCVGVVVHDIAVSSPGDSPNTDGIHLQNTKDVLIHSTTLACGDDCISIQTGCSNVF 353
Query: 189 -----CGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFT 243
CGPG GIS+GSLGK V +TVR+ T GVR+KTW +G
Sbjct: 354 VHNVNCGPGHGISIGSLGKEGTKACVSNITVRDVAMHNTMTGVRIKTW-QGGVGSVKGII 412
Query: 244 FEDIVMNNVENPIVIDQLYCPYNKC 268
F +I +N V+ PI I+Q YC ++KC
Sbjct: 413 FSNIQLNQVQIPITINQFYCDHSKC 437
>gi|46485878|gb|AAS98503.1| unknown protein [Oryza sativa Japonica Group]
Length = 504
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 135/324 (41%), Gaps = 85/324 (26%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPP--GKYLVSFAEFEGPCKA 83
V +V+ FGAV DG TDD++AF +WR A ++ V+ P G + ++ F GPCK
Sbjct: 89 VFDVRAFGAVGDGTTDDTEAFRAAWRAAC---AVESAVISVPSDGTFTITTTTFTGPCKP 145
Query: 84 SISFQLQGLLD------------------LFSIDTSLSL-AKGTFHGQGETAWPL----- 119
+ FQ+ G+L +FS L+L GT G GE W L
Sbjct: 146 GLVFQVDGVLMPPDGPDCWPPSDNRRQWLVFSNLDGLTLRGAGTIEGNGEGWWNLPCKPH 205
Query: 120 ----------------------NQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHI 157
N C PT +RF + + G++ +S FH
Sbjct: 206 RLARLNTGSEFALVTLNSVQGPNGSTLRGPCDSPTLVRFFMSRNLVVEGLRVENSPEFHF 265
Query: 158 NILGCYNLKLNDLKITAHADS---------------------------------SKDILV 184
GC +++++ L I + A+S S D+ +
Sbjct: 266 RFDGCSDVRVDGLSIRSPANSPNTDGIHVENTQRVAIYNSMISNGDDCISIGTGSYDVDI 325
Query: 185 SEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTF 244
V CGPG GIS+GSLG V +TVRN + NG+R+KTW +G S F
Sbjct: 326 QNVSCGPGHGISIGSLGVHNSQACVANVTVRNAVIRNSDNGLRIKTW-QGGMGSVSGINF 384
Query: 245 EDIVMNNVENPIVIDQLYCPYNKC 268
+ + M NV N I+IDQ YC +C
Sbjct: 385 DTVSMENVRNCIIIDQYYCLDKRC 408
>gi|449445220|ref|XP_004140371.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 392
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 133/297 (44%), Gaps = 55/297 (18%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPC 81
A N+ GA+ADG TD S AF +W A T+ VP G + + F GPC
Sbjct: 22 AAGSTFNIVSLGAIADGKTDASHAFQEAWANACG-SSEPATIYVPNGAFYIQSGNFSGPC 80
Query: 82 K-------------ASISFQL----QGLLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHK 124
K AS + Q+ Q + I+ LS+ G GQG W N H
Sbjct: 81 KNNAITIVINGTLIASSNIQVLAQSQAWIAFRQIN-GLSIYGGVIDGQGIGLW--NCKHS 137
Query: 125 NSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----- 178
C T + + + + G+ S++S+ F+I + GC N+++ + +++ DS
Sbjct: 138 GKSCPDGATNLEISHAQNVNVNGLSSINSQMFNIVVYGCENVQIQGVNVSSAGDSPNTDG 197
Query: 179 ----------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVV 210
+ ++ + + CGPG GIS+GSLG+ +++ V
Sbjct: 198 IHVQQSLNVNISSTSIGTGDDCISIGPGTTNLWMENIKCGPGHGISIGSLGRQVEEAGVE 257
Query: 211 GLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
+TV TFT T NGVR+K+W A+ F+ I NV NPI+IDQ YCP N+
Sbjct: 258 NVTVTTATFTGTQNGVRIKSWGRPSNAFANKILFQHIRFYNVNNPILIDQNYCPNNQ 314
>gi|357470583|ref|XP_003605576.1| hypothetical protein MTR_4g034020 [Medicago truncatula]
gi|355506631|gb|AES87773.1| hypothetical protein MTR_4g034020 [Medicago truncatula]
Length = 373
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 133/285 (46%), Gaps = 56/285 (19%)
Query: 31 DFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS-ISFQ 88
D+GAV DG+TDDS+ F W + D T+LVP GK +L++ +F GPC S + FQ
Sbjct: 2 DYGAVGDGLTDDSQVFLKVWNDICKRDSDTPTLLVPSGKTFLLNPLKFRGPCSFSPVHFQ 61
Query: 89 LQG------------------LLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQL 130
L+G + + I + G GQG T W N N C
Sbjct: 62 LEGNIVAPSSSEAWKDEDYTKWIVFYYIHGIIIDGGGQIDGQGSTWWKTNCSVTN--CPR 119
Query: 131 PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------ 178
PT + + ++ + G ++S HI+I ++ + + ITA +S
Sbjct: 120 PTALHIDNCSNLQLNGTHHLNSARNHISIDYSDHVNIFKINITAPQESPNTDGIDIGHSS 179
Query: 179 ---------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNC 217
+ +I ++ V CGPG GISVGSLG+ E V + V+NC
Sbjct: 180 YVLIQDSTIATGDDCIAMNNGTSNINITGVTCGPGHGISVGSLGENGAYEIVEQVYVKNC 239
Query: 218 TFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLY 262
TF T NG+R+KTWP G A N +FE I++ +NPI+IDQ Y
Sbjct: 240 TFIRTENGMRIKTWPGGS-GYARNISFEQIILTETKNPIIIDQNY 283
>gi|302774382|ref|XP_002970608.1| hypothetical protein SELMODRAFT_33909 [Selaginella moellendorffii]
gi|300162124|gb|EFJ28738.1| hypothetical protein SELMODRAFT_33909 [Selaginella moellendorffii]
Length = 357
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 156/362 (43%), Gaps = 77/362 (21%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP---PGKYL--VSFAEFEGPC 81
NVK++GAV DG DD++AF ++ A G +LVP G YL +SF E
Sbjct: 1 FNVKNYGAVGDGKHDDAQAFLDAYNAACQ-AGDNAVILVPSTSAGYYLSPISFGEC---- 55
Query: 82 KASISFQLQGLLD------------------LFSIDTSLSLAKGTFHGQGETAWPLNQCH 123
S++ ++ G L LF+ T +L GTF+G G+ W + C
Sbjct: 56 -TSVTMKVDGTLHAIPRSAWLSKFSSEKSWLLFTKVTDFTLTGGTFNGNGQDWWA-HSCK 113
Query: 124 KNSD---CQLPTPIRFNFLNDSTITGIKSVDSRYFHI----------------------- 157
K+ PT +RF + + GI +S HI
Sbjct: 114 KDKSQHCTDAPTAVRFEDSKNIKVEGITITNSPQIHITFSDSQAIQATDVVINSPESSPN 173
Query: 158 ----NILGCYNLKLNDLKITAHAD------SSKDILVSEVFCGPGQGISVGSLGKGIKDE 207
++ G N+ + D I+A D S +I V CGPG GIS+GSLGKG
Sbjct: 174 TDGIHVSGSTNVVVRDADISAGDDCVSIVSGSSNIQVLGGRCGPGHGISIGSLGKGGSYA 233
Query: 208 EVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
V + V +NGVR+KTW G SN FE+I M+NV+NPI+IDQ YC
Sbjct: 234 TVSNVQVSGVKIDAATNGVRIKTWQGGK-GYVSNVIFENISMDNVKNPIIIDQNYCD-GG 291
Query: 268 CNIKPKDSMPNIEIGNRNLVY-----NGVNVKV--EGPETTSLCSNVKPTL--FGKQIPA 318
C K S+ + N+V +G+N+ G T SNVK TL GK A
Sbjct: 292 CGKKRGSSLTIQGVTYSNIVGTSASPDGINLHCSSSGACTNIHFSNVKLTLGSSGKAAGA 351
Query: 319 TC 320
C
Sbjct: 352 VC 353
>gi|449479923|ref|XP_004155747.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 392
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 133/297 (44%), Gaps = 55/297 (18%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPC 81
A N+ GA+ADG TD S AF +W A T+ VP G + + F GPC
Sbjct: 22 AAGSTFNIVSLGAIADGKTDASHAFQEAWANACG-SSEPATIYVPNGAFYIQSGNFSGPC 80
Query: 82 K-------------ASISFQL----QGLLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHK 124
K AS + Q+ Q + I+ LS+ G GQG W N H
Sbjct: 81 KNNAITIVINGTLIASSNIQVLAQSQAWIAFRQIN-GLSIYGGVIDGQGIGLW--NCKHS 137
Query: 125 NSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----- 178
C T + + + + G+ S++S+ F+I + GC N+++ + +++ DS
Sbjct: 138 GKSCPDGATNLEISHAQNVHVNGLSSINSQMFNIVVYGCENVQIQGVNVSSAGDSPNTDG 197
Query: 179 ----------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVV 210
+ ++ + + CGPG GIS+GSLG+ +++ V
Sbjct: 198 IHVQQSLNVNISSTSIGTGDDCISIGPGTTNLWMENIKCGPGHGISIGSLGRQVEEAGVE 257
Query: 211 GLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
+TV TFT T NGVR+K+W A+ F+ I NV NPI+IDQ YCP N+
Sbjct: 258 NVTVTTATFTGTQNGVRIKSWGRPSNAFATKILFQHIRFYNVNNPILIDQNYCPNNQ 314
>gi|3164119|emb|CAA11846.1| polygalacturonase [Rubus idaeus]
Length = 335
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 120/256 (46%), Gaps = 58/256 (22%)
Query: 63 VLVPPGKYLVSFAEFEGPCKASISFQLQGLL-----------DLF------SIDTSLSLA 105
+LVP YLV F GPCK+ ++ Q+ G + DL+ ++ L
Sbjct: 6 LLVPKKNYLVKPITFSGPCKSKLTMQIYGSIEASDDRSVYSKDLYHWIIFDNVRNLLVQG 65
Query: 106 KGTFHGQGETAWPLNQCHKNSDCQ-----LPTPIRFNFLNDSTITGIKSVDSRYFHINIL 160
GT +G G+ W N C KN + PT + F N+ + +K DS+ H++
Sbjct: 66 PGTINGNGQIWWQ-NSC-KNKHTKPCGTLAPTAVTFYQCNNLVVKNLKFKDSQQMHVSFE 123
Query: 161 GCYNLKLNDLKITAHADS---------------------------------SKDILVSEV 187
C N++ + L +TA S S+++ S +
Sbjct: 124 DCTNVQASYLTVTAPETSPNTDGIHVANTQNITISNSIIGTGDDCISIVSGSQNVQASSI 183
Query: 188 FCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDI 247
CGPG GIS+GSLG+G ++ V +TV + T NGVR+KTW G+ASN F++I
Sbjct: 184 TCGPGHGISIGSLGEGGSEDRVSKVTVNGAKISGTMNGVRIKTWQGGS-GMASNIVFQNI 242
Query: 248 VMNNVENPIVIDQLYC 263
MN+V NPI+IDQ YC
Sbjct: 243 EMNDVTNPIIIDQNYC 258
>gi|224122852|ref|XP_002318932.1| predicted protein [Populus trichocarpa]
gi|222857308|gb|EEE94855.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 130/305 (42%), Gaps = 65/305 (21%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKY--LVSFAEFEGPCKA 83
V NV FGAV DG TDD++AF +W A + + +L+ P Y ++ F GPCK
Sbjct: 76 VYNVLSFGAVGDGDTDDTQAFKMAWDTACFQN--EPAILLAPDDYSFMIQPTVFTGPCKT 133
Query: 84 SISFQLQGL-------------------LDLFSIDTSLSLAKGTFHGQGETAWPLN-QCH 123
S+ FQ+ G L + ID G G+GE W L + H
Sbjct: 134 SLVFQIDGTIMPPDGPESWPSKTNKRQWLVFYKIDGMSMQGGGVIDGRGEKWWNLPCKPH 193
Query: 124 KNSD-------CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA-- 174
K + C P +RF ++ + G++ +S FH C ++ + L I +
Sbjct: 194 KGPNGATLPGPCDSPVAMRFFMSSNLIVQGLEVKNSPQFHFRFDNCQDVTVQMLSIKSPP 253
Query: 175 --------HADSSKDILV-----------------------SEVFCGPGQGISVGSLGKG 203
H +++ ++ + + CGP GIS+GSLG G
Sbjct: 254 LSPNTDGIHIENTNNVQIYNSVISNGDDCVSIGAGCHNVDIKNITCGPSHGISIGSLGIG 313
Query: 204 IKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
V +TVR+ + NGVR+KTW + G S +F +I M V NPI+IDQ YC
Sbjct: 314 NSRACVSNITVRDSVIKHSDNGVRIKTWQGGY-GSVSKISFHNINMETVRNPIIIDQYYC 372
Query: 264 PYNKC 268
C
Sbjct: 373 QTKNC 377
>gi|224117770|ref|XP_002331627.1| predicted protein [Populus trichocarpa]
gi|222874023|gb|EEF11154.1| predicted protein [Populus trichocarpa]
Length = 396
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 141/292 (48%), Gaps = 57/292 (19%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCK-ASIS 86
+V +GA DG TD +KAF +W +A T+ VP G + + F+GPCK +I
Sbjct: 33 SVLSYGAKPDGKTDSTKAFAAAWAQACASA-QPATISVPKGSFSLGQVRFQGPCKNRAIL 91
Query: 87 FQLQGLLD---------------LFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLP 131
++ G L +F ++++ GT GQG W KNS P
Sbjct: 92 VRIDGTLVAPSDYKVIGNAKNWLIFEHINGVTVSGGTLDGQGAGLWSC----KNSGKGCP 147
Query: 132 ---TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADS 178
T + F+ N+ ITG+ S++S+ FHI I GC +K+ +K++A H S
Sbjct: 148 RGATSLEFSNSNNIAITGLASLNSQLFHIVINGCQKVKVQGVKVSAAGSSPNTDGIHVQS 207
Query: 179 SKDIL-----------------------VSEVFCGPGQGISVGSLGKGIKDEEVVGLTVR 215
S + + V CGPG GIS+GSLGK ++ V +TV+
Sbjct: 208 STGVTILNSRIGTGDDCVSIGPGTSSLWIENVACGPGHGISIGSLGKESQEAGVQNVTVK 267
Query: 216 NCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
TFT T NG+R+K+W G A + F+ VMNNV+NPIVIDQ YCP K
Sbjct: 268 TTTFTGTENGLRIKSWGRPSNGFARDILFQHAVMNNVQNPIVIDQNYCPGEK 319
>gi|359496583|ref|XP_003635269.1| PREDICTED: polygalacturonase-like [Vitis vinifera]
Length = 313
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 124/267 (46%), Gaps = 41/267 (15%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK 60
LL A F +L + AT NV + GA DG TD +KAF +W A
Sbjct: 11 LLAAVLFMVLQPYW-------ATAVTYNVVNLGAKGDGHTDSTKAFLNAWAAACG-SASP 62
Query: 61 GTVLVPPGKYLVSFAEFEGPCKASISFQLQGLLDLFSIDTSLSLAKGTFHGQGETAWPLN 120
T+ VPPG+YL+ A F G +I+F+ ID +L +A + G A
Sbjct: 63 ATIYVPPGRYLLLNAVFRGCKNHAITFR---------IDATL-VAPSDYRVIGNAA---- 108
Query: 121 QCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSSK 180
N+L +TG+ + ++ G +
Sbjct: 109 ----------------NWLAFQDVTGVSIIGGV---LDGQGTGLWAXXXXXXXXVGPGAT 149
Query: 181 DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIAS 240
++ + V CGPG GIS+GSLGK +K+E V +TV+ TFT + NGVR+K+W + G
Sbjct: 150 NLWIENVACGPGHGISIGSLGKDLKEEGVQNVTVKTVTFTGSQNGVRIKSWARASNGFVK 209
Query: 241 NFTFEDIVMNNVENPIVIDQLYCPYNK 267
F+ I+M NV+NPIVIDQ YCP +K
Sbjct: 210 RVVFQHILMVNVQNPIVIDQNYCPGHK 236
>gi|357475199|ref|XP_003607885.1| hypothetical protein MTR_4g084050 [Medicago truncatula]
gi|85719349|gb|ABC75354.1| Glycoside hydrolase, family 28 [Medicago truncatula]
gi|355508940|gb|AES90082.1| hypothetical protein MTR_4g084050 [Medicago truncatula]
Length = 394
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 137/291 (47%), Gaps = 62/291 (21%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS- 84
NV +GA DG TDDS AF +W++ T+++P G+ +++ F+GPCK++
Sbjct: 23 FNVVKYGAKGDGHTDDSNAFTNAWQDVCGSTRDTPTLIIPEGQNFMLQPLSFQGPCKSTT 82
Query: 85 ISFQLQGLL--------------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHK 124
IS ++ G + +I+ + GT GQG++ W
Sbjct: 83 ISVKIMGTITAPQSNANWKWDDNDGDYWIKFSNINGLIINGGGTVDGQGDSWW------N 136
Query: 125 NSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------ 178
N+ PT ++ ++ + +K ++S HI+I+GC + +++L I A DS
Sbjct: 137 NNGHIRPTALKILECDNLKLGPLKHINSPRNHISIVGCNDALISNLHIIAPKDSPNTDGI 196
Query: 179 ---------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVG 211
++ I ++++ CGPG GISVGSLGK V
Sbjct: 197 DISTSTNISVQHSIISTGDDCIAINNGTEFIYITDIQCGPGHGISVGSLGKDGDYSTVEE 256
Query: 212 LTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLY 262
+ V N TF T+NG R+KTW G A T+EDI++ VENP++IDQ Y
Sbjct: 257 IHVSNITFRETTNGARIKTWTGGS-GYARKITYEDIIVFKVENPVIIDQQY 306
>gi|351725093|ref|NP_001238104.1| polygalacturonase PG2 precursor [Glycine max]
gi|5669848|gb|AAD46484.1| polygalacturonase PG2 [Glycine max]
Length = 439
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 144/337 (42%), Gaps = 72/337 (21%)
Query: 1 LLLAARFSLLVSFITSVRGID------ATNRVLNVKDFGAVADGITDDSKAFDTSWREAW 54
L++ FS+ S T+ R A NV D+GA G DD+KAF +W A
Sbjct: 10 LIIGIAFSVWSSSCTAARVSHWRKLKAAYATTFNVLDYGAKDGGHADDTKAFQNAWVAAC 69
Query: 55 NWDGIKGTVLVPPGK-YLVSFAEFEGP-CKASISFQLQG-----------------LLDL 95
+G T++VP G +LV F GP C+ +I FQL G L+
Sbjct: 70 KVEG--STMVVPSGSVFLVKPISFSGPNCEPNIVFQLDGKIIAPTGSAAWGSGTLQWLEF 127
Query: 96 FSIDTSLSLAKGTFHGQGETAWPLNQCHKN-------SDCQLP----TPIRFNFLNDSTI 144
++ KG GQG W + N S+ +LP T +RF + T+
Sbjct: 128 SKLNKITIRGKGVIDGQGSVWWNNDSPTYNPTEVMLESNGRLPSTKPTALRFYGSDGVTV 187
Query: 145 TGIKSVDSRYFHINILGCYNLKLNDLKITAHADSS------------------------- 179
TGI +S+ H+ C N++++ + +++ DS
Sbjct: 188 TGITIQNSQQTHLKFDSCTNVQVSGISVSSPGDSPNTDGIHLQNSQNVVIYSSTLACGDD 247
Query: 180 --------KDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTW 231
DI V V CGPG GIS+GSLG+ V +TVR+ T T GVR+KTW
Sbjct: 248 CISIQTGCSDIYVHNVNCGPGHGISIGSLGRENTKACVRNVTVRDVTIQNTLTGVRIKTW 307
Query: 232 PDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
G N F ++ ++ V+ PI+IDQ YC KC
Sbjct: 308 QGGS-GSVQNIMFSNVQVSGVQIPILIDQYYCDGGKC 343
>gi|297842853|ref|XP_002889308.1| hypothetical protein ARALYDRAFT_316947 [Arabidopsis lyrata subsp.
lyrata]
gi|297335149|gb|EFH65567.1| hypothetical protein ARALYDRAFT_316947 [Arabidopsis lyrata subsp.
lyrata]
Length = 374
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 137/295 (46%), Gaps = 59/295 (20%)
Query: 32 FGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPC-KASISFQL 89
+GAV DGI DD+ AF +W +A G+V VP GK +L++ F GPC + F +
Sbjct: 3 YGAVGDGIADDTSAFQKAWEDACKGSSKMGSVNVPAGKVFLLNSLHFTGPCIPKPLLFII 62
Query: 90 QG--------------------LLDLFSIDTSLSLAKGTFHGQGETAWPLN-QCHKNSDC 128
G L +D + +G GQG++ W ++ + H +C
Sbjct: 63 DGEMIAQSDPKKWENGENGVIPWLIFDQVDGLAIVGRGLLDGQGKSWWDIHCRDHAGPNC 122
Query: 129 --QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA------------ 174
PT + F+ + T+ ++ +S H+ ++G N+ +ND+K+T+
Sbjct: 123 IWLAPTMMTFSNCGNVTLKSLRFRNSAQTHVLVMGSQNVYINDIKVTSPEASPNTDGIHI 182
Query: 175 ---------HADSS------------KDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLT 213
H+D + ++ V+ + CGPG G S+GSLG+G + V +
Sbjct: 183 TSSTVVSINHSDIATGDDCVSIGDQVNNLNVTFMNCGPGHGDSIGSLGRGGTEVAVENIR 242
Query: 214 VRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
V + FT T+NG R+KTWP G F DI ++V+NPI+IDQ Y KC
Sbjct: 243 VWHVNFTGTTNGARIKTWPGG-TGYVRGIEFFDIHFSSVQNPIIIDQFYGCAPKC 296
>gi|297848456|ref|XP_002892109.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337951|gb|EFH68368.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 491
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 136/312 (43%), Gaps = 65/312 (20%)
Query: 21 DATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKY--LVSFAEFE 78
D N + NV+ +GAV DG TDD++AF +W A N + +VL+ P Y ++ F
Sbjct: 83 DDNNGIYNVRKYGAVGDGETDDTEAFKMAWDSACNNENNTDSVLLVPYGYTFMIQSTIFT 142
Query: 79 GPCKASISFQLQGL-------------------LDLFSIDTSLSLAKGTFHGQGETAWPL 119
GPC++ FQ+ G L + ++ G G+G+ W L
Sbjct: 143 GPCRSYQFFQVDGTIVTPDGPESWPSNISKRQWLVFYRVNGMSLKGDGVIDGRGQKWWDL 202
Query: 120 N-QCHKNSD--------CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
+ H++ + C P +RF ++ + G++ +S FH GC + + L
Sbjct: 203 PCKPHRSVNKSAIVAGPCDSPIALRFFMSSNLRVEGLQIKNSPQFHFRFDGCQGVHVESL 262
Query: 171 KITA----------HADSSK-----------------------DILVSEVFCGP-GQGIS 196
ITA H ++S D+ + + CGP G GIS
Sbjct: 263 HITAPPLSPNTDGIHIENSNSVTIYNSIISNGDDCVSIGSGSYDVDIRNLTCGPGGHGIS 322
Query: 197 VGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPI 256
+GSLG V +TVR+ + NGVR+KTW G S TF +I +++V NPI
Sbjct: 323 IGSLGNHNSRACVSNITVRDSVIKYSDNGVRIKTWQGGS-GSVSGVTFNNIHVDSVRNPI 381
Query: 257 VIDQLYCPYNKC 268
+IDQ YC C
Sbjct: 382 IIDQYYCMTKDC 393
>gi|356526793|ref|XP_003532001.1| PREDICTED: polygalacturonase At1g48100 isoform 3 [Glycine max]
Length = 506
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 130/302 (43%), Gaps = 56/302 (18%)
Query: 19 GIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEF 77
G + NV DFGA DG +DD+KAF +W EA + T+LVP + V F
Sbjct: 114 GGHSPTTTFNVLDFGAKGDGKSDDTKAFQEAWAEACKVE--SSTMLVPADYVFFVGPISF 171
Query: 78 EGP-CKASISFQL--------------QGLLDLFSIDTSLSL---AKGTFHGQGETAWPL 119
GP CK SI FQL +GLL + + G G+G W
Sbjct: 172 SGPYCKPSIVFQLDGTIVAPTSPNAWGKGLLQWLEFSKLVGITIQGNGIIDGRGSVWWQD 231
Query: 120 NQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS- 178
K + PT +RF + T+TGI +S H+ C + ++++ I++ DS
Sbjct: 232 KMGGKMPSVK-PTALRFYGSFNPTVTGITIQNSPQCHLKFDSCNGVMVHNVTISSPGDSP 290
Query: 179 ---------SKDIL-----------------------VSEVFCGPGQGISVGSLGKGIKD 206
SKD+L V V CGPG GIS+GSLGK
Sbjct: 291 NTDGIHLQNSKDVLIYGSTMACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTR 350
Query: 207 EEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYN 266
V +TVR+ T NGVR+KTW G F +I ++ VE PIVIDQ YC
Sbjct: 351 ACVSNITVRDVNMHNTMNGVRIKTW-QGGSGSVQGVLFSNIQVSEVELPIVIDQFYCDKR 409
Query: 267 KC 268
C
Sbjct: 410 TC 411
>gi|357114983|ref|XP_003559273.1| PREDICTED: polygalacturonase ADPG1-like [Brachypodium distachyon]
Length = 346
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 137/296 (46%), Gaps = 58/296 (19%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKASI 85
++ ++GA DG DD++A +W A + +LVP GK YL+ GPCK+++
Sbjct: 27 FSIDNYGARGDGKRDDTEALAKAWTAACS-SSRPAVLLVPKGKTYLLKSITLSGPCKSNL 85
Query: 86 SFQLQGLLD------------------LFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSD 127
F ++G L L I+ L++ G W N C N
Sbjct: 86 VFMVKGTLAAPRSLSDWSEENRRHWIVLHGIN-GLTVTGGGTINGNGELWWKNSCKTNKA 144
Query: 128 --C-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA---------- 174
C Q PT + F+ ++ T+ +K V+S+ ++++ C +++L L ITA
Sbjct: 145 RPCKQAPTALTFHLCSNLTVENLKIVNSQQINMSVEDCSDVQLARLSITAPGTSPNTDGI 204
Query: 175 HADSSKDI-----------------------LVSEVFCGPGQGISVGSLGKGIKDEEVVG 211
H SKD+ V++V CGPG GIS+GSLG EV G
Sbjct: 205 HITRSKDVQVRDCVIKTRDDCMSIEDGTHNLRVTKVVCGPGHGISIGSLGDDNSRAEVSG 264
Query: 212 LTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
+ + T+NG R+KT+ G A + F++I+++NV+NPI+IDQ YC K
Sbjct: 265 IYIDTVQLYGTTNGARIKTYQGGS-GYAKDIVFQNIIIDNVQNPIIIDQNYCDSAK 319
>gi|326503442|dbj|BAJ86227.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 135/305 (44%), Gaps = 66/305 (21%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPP--GKYLVSFAEFEGPCKA 83
V +V+ +GA + DD++AF +WR A ++ VL+ P G + +S F GPCK
Sbjct: 93 VFDVRAYGATGESTADDTEAFRAAWRAAC---AVESAVLLVPSDGTFTISTTTFSGPCKP 149
Query: 84 SISFQLQGLLD------------------LFSIDTSLSL-AKGTFHGQGETAWPL----- 119
+ FQ+ G++ +FS L+L GT G GE W L
Sbjct: 150 GLVFQVDGVMMPPDGPDCWPPSDNRRQWLVFSNLDGLTLRGAGTIEGNGEEWWNLPCKPH 209
Query: 120 ---NQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 176
N + C PT IRF + + G++ +S FH GC ++ ++ L I++ A
Sbjct: 210 RGPNGSTLHGPCDSPTLIRFFESCNLVVQGLRVENSPEFHFRFDGCSDVLVDGLFISSPA 269
Query: 177 DS---------------------------------SKDILVSEVFCGPGQGISVGSLGKG 203
+S S D+ + V CGPG GIS+GSLG
Sbjct: 270 NSPNTDGIHVENTERVGIYNSKISNGDDCISIGTGSYDVDIQNVTCGPGHGISIGSLGVH 329
Query: 204 IKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
V +TVR+ + NG+R+KTW +G S TF+ + M NV N I+IDQ YC
Sbjct: 330 NSQACVANVTVRDAVIRNSDNGLRIKTW-QGGMGSVSGITFDGVTMENVRNCIIIDQYYC 388
Query: 264 PYNKC 268
+C
Sbjct: 389 QDKRC 393
>gi|413943668|gb|AFW76317.1| hypothetical protein ZEAMMB73_878249 [Zea mays]
Length = 328
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 107/211 (50%), Gaps = 35/211 (16%)
Query: 93 LDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVD 151
+++ +D + KG GQG W N C K DC+ LP + +F+N+ ++G+ ++
Sbjct: 40 IEILRVDNLVITGKGNLDGQGPFVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLLN 99
Query: 152 SRYFHINILGCYNLKLNDLKITAHADS--------------------------------- 178
S++FH+N+ C ++ + D+ +TA DS
Sbjct: 100 SKFFHMNMYQCKDMLIKDVTVTAPGDSPNTDGIHMGDTSGITITNTVIGVGDDCISIGPG 159
Query: 179 SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGI 238
+ + ++ V CGPG GIS+GSLG+ +++V + V++CT T+ GVR+K + D+ +
Sbjct: 160 TSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTTFGVRIKAYEDAASEL 219
Query: 239 A-SNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
S +E++ M + NPI ID +YCP C
Sbjct: 220 TVSKIHYENVKMEDSTNPIFIDMMYCPNKLC 250
>gi|219886807|gb|ACL53778.1| unknown [Zea mays]
Length = 437
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 138/324 (42%), Gaps = 59/324 (18%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKA 83
RV+NV D+GA D ++AF +W EA N + LVP GK YL+ F GPC+A
Sbjct: 58 RVVNVDDYGAADA-GVDAAEAFLAAWSEACNSSAGRSVFLVPEGKAYLLMPVSFRGPCRA 116
Query: 84 -SISFQLQGLLDLFS------------------IDTSLSLAKGTFHGQGETAWPLNQCHK 124
S++ ++G L+ S +D L GT G G W +N C
Sbjct: 117 ASVAAMIKGTLEAPSDRSVWLERGLQEWITFEGVDRLRVLGGGTLDGNGMQWW-INSCKL 175
Query: 125 NSDCQL---PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA------- 174
N + PT + + ++ DS H+ I ++ ++ L ITA
Sbjct: 176 NRSARCVTGPTALYLRRCTRLVVEELQVRDSMQMHVAIAYSRDVAVSRLSITAPAWSPNT 235
Query: 175 ---HADSSKDILVSE-----------------------VFCGPGQGISVGSLGKGIKDEE 208
H +S+++ +S +FCGPG GIS+GSLG
Sbjct: 236 DGIHVSNSREVSISRCTIATGDDCVSIVTGSTFVRVTSIFCGPGHGISIGSLGANNSWAH 295
Query: 209 VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
V + V T T+NGVR+KTW + G A +F DI M NV NPI+IDQ YC +
Sbjct: 296 VSDVLVEKATLLGTTNGVRIKTWQGGY-GYAERISFRDISMRNVTNPIIIDQNYCDSART 354
Query: 269 NIKPKDSMPNIEIGNRNLVYNGVN 292
+ RN+ Y ++
Sbjct: 355 TTPSSCHDQGSAVAVRNISYRNIH 378
>gi|297814886|ref|XP_002875326.1| hypothetical protein ARALYDRAFT_484425 [Arabidopsis lyrata subsp.
lyrata]
gi|297321164|gb|EFH51585.1| hypothetical protein ARALYDRAFT_484425 [Arabidopsis lyrata subsp.
lyrata]
Length = 470
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 133/300 (44%), Gaps = 60/300 (20%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
V N+ FGA DG++DDSKA +W+ A + + G V +P GK +LV +GPCK
Sbjct: 66 VFNIISFGAKGDGVSDDSKALVRAWKAA--CEVVGGKVEIPAGKQFLVKAVTLQGPCKEE 123
Query: 85 ISFQLQGLL------------DLFS------IDTSLSLAKGTFHGQGETAWPLNQCHKNS 126
Q++G L LF + GT +G+G W L+ +
Sbjct: 124 TVVQIEGTLVAPEKIGSWPKSSLFQWLNIKWVSHVTIQGSGTLNGRGSNWWNLDTYQIQT 183
Query: 127 DCQL-----PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--- 178
+ PT +RF ++ T+ I V+S H+ +K+N++ I++ +S
Sbjct: 184 RNKYIPPMKPTALRFYAAHNVTVRDISIVNSPLCHLKFDDSDGVKVNNITISSPENSPNT 243
Query: 179 ------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEE 208
S ++ + + CGPG GIS+G LGK
Sbjct: 244 DGIHLQNTRNVEIQHSNIACGDDCVSIQTGSSNVHIHHINCGPGHGISIGGLGKDKSVAC 303
Query: 209 VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
V + V + + T GVR+KTW +G+ N TF +I + +V+ PIVIDQ YC +KC
Sbjct: 304 VSDIIVEDISIQNTLAGVRIKTW-QGGLGVVKNLTFSNIQVTDVKVPIVIDQYYCDKSKC 362
>gi|222632674|gb|EEE64806.1| hypothetical protein OsJ_19662 [Oryza sativa Japonica Group]
Length = 534
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 142/311 (45%), Gaps = 69/311 (22%)
Query: 24 NRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGP-C 81
N V NV DFGA DG+TDD++AF+ +W A + TVLVP +++V F GP C
Sbjct: 131 NTVFNVVDFGARGDGVTDDTQAFEEAWAAACKVEA--STVLVPSELEFVVGPISFSGPYC 188
Query: 82 KASISFQL--------------QGLLDL--FSIDTSLSL-AKGTFHGQGETAWPLNQCHK 124
K +I FQL GLL F+ + +S+ G +G+G+ W + +
Sbjct: 189 KPNILFQLDGTILAQTSTRVWGSGLLQWLEFTKLSGISIQGSGVINGRGQEWWTYSDPND 248
Query: 125 NS-------DCQL-------PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
+ + +L PT +RF ++ T+TGI V+S H+ C + ++DL
Sbjct: 249 DDNDDVDAYNVELEKMPQIKPTALRFYGSSNVTVTGITIVNSSQCHLKFDSCQGVMVHDL 308
Query: 171 KITA----------HADSSK-----------------------DILVSEVFCGPGQGISV 197
I++ H +SK DI + V CGPG GIS+
Sbjct: 309 TISSPENSPNTDGIHLQNSKQVSIHHSNLACGDDCVSIQTGCSDINIHNVNCGPGHGISI 368
Query: 198 GSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIV 257
G LG+ V +TVR+ T GVR+KTW G+ F +I ++ V+ PI+
Sbjct: 369 GGLGRYNTKACVSNVTVRDVNMFKTMTGVRIKTWQGGS-GLVQGIRFSNIQVSEVQTPII 427
Query: 258 IDQLYCPYNKC 268
IDQ YC C
Sbjct: 428 IDQFYCDRTTC 438
>gi|226501014|ref|NP_001150245.1| polygalacturonase precursor [Zea mays]
gi|195637770|gb|ACG38353.1| polygalacturonase precursor [Zea mays]
Length = 437
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 138/324 (42%), Gaps = 59/324 (18%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKA 83
RV+NV D+GA D ++AF +W EA N + LVP GK YL+ F GPC+A
Sbjct: 58 RVVNVDDYGAADA-GVDAAEAFLAAWSEACNSSAGRSVFLVPEGKAYLLMPVSFRGPCRA 116
Query: 84 -SISFQLQGLLDLFS------------------IDTSLSLAKGTFHGQGETAWPLNQCHK 124
S++ ++G L+ S +D L GT G G W +N C
Sbjct: 117 ASVAAMIKGTLEAPSDRSVWLERGLQEWITFEGVDRLRVLGGGTLDGNGMQWW-INSCKL 175
Query: 125 NSDCQL---PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA------- 174
N + PT + + ++ DS H+ I ++ ++ L ITA
Sbjct: 176 NRSARCVTGPTALYLRRCTRLVVEELQVRDSMQMHVAIAYSRDVAVSRLSITAPAWSPNT 235
Query: 175 ---HADSSKDILVSE-----------------------VFCGPGQGISVGSLGKGIKDEE 208
H +S+++ +S +FCGPG GIS+GSLG
Sbjct: 236 YGIHVSNSREVSISRCTIATGDDCVSIVTGSTFVRVTSIFCGPGHGISIGSLGANNSWAH 295
Query: 209 VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
V + V T T+NGVR+KTW + G A +F DI M NV NPI+IDQ YC +
Sbjct: 296 VSDVLVEKATLLGTTNGVRIKTWQGGY-GYAERISFRDISMRNVTNPIIIDQNYCDSART 354
Query: 269 NIKPKDSMPNIEIGNRNLVYNGVN 292
+ RN+ Y ++
Sbjct: 355 TTPSSCHDQGSAVAVRNISYRNIH 378
>gi|218197319|gb|EEC79746.1| hypothetical protein OsI_21117 [Oryza sativa Indica Group]
Length = 534
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 142/311 (45%), Gaps = 69/311 (22%)
Query: 24 NRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGP-C 81
N V NV DFGA DG+TDD++AF+ +W A + TVLVP +++V F GP C
Sbjct: 131 NTVFNVVDFGARGDGVTDDTQAFEEAWAAACKVEA--STVLVPSELEFVVGPISFSGPYC 188
Query: 82 KASISFQL--------------QGLLDL--FSIDTSLSL-AKGTFHGQGETAWPLNQCHK 124
K +I FQL GLL F+ + +S+ G +G+G+ W + +
Sbjct: 189 KPNILFQLDGTILAQTSTRVWGSGLLQWLEFTKLSGISIQGSGVINGRGQEWWTYSDPND 248
Query: 125 NS-------DCQL-------PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
+ + +L PT +RF ++ T+TGI V+S H+ C + ++DL
Sbjct: 249 DDNDDVDAYNVELEKMPQIKPTALRFYGSSNVTVTGITIVNSSQCHLKFDSCQGVMVHDL 308
Query: 171 KITA----------HADSSK-----------------------DILVSEVFCGPGQGISV 197
I++ H +SK DI + V CGPG GIS+
Sbjct: 309 TISSPENSPNTDGIHLQNSKQVSIHHTNLACGDDCVSIQTGCSDINIHNVNCGPGHGISI 368
Query: 198 GSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIV 257
G LG+ V +TVR+ T GVR+KTW G+ F +I ++ V+ PI+
Sbjct: 369 GGLGRYNTKACVSNVTVRDVNMFKTMTGVRIKTWQGGS-GLVQGIRFSNIQVSEVQTPII 427
Query: 258 IDQLYCPYNKC 268
IDQ YC C
Sbjct: 428 IDQFYCDRTTC 438
>gi|413956537|gb|AFW89186.1| polygalacturonase [Zea mays]
Length = 462
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 138/324 (42%), Gaps = 59/324 (18%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKA 83
RV+NV D+GA D ++AF +W EA N + LVP GK YL+ F GPC+A
Sbjct: 83 RVVNVDDYGAADA-GVDAAEAFLAAWSEACNSSAGRSVFLVPEGKAYLLMPVSFRGPCRA 141
Query: 84 -SISFQLQGLLDLFS------------------IDTSLSLAKGTFHGQGETAWPLNQCHK 124
S++ ++G L+ S +D L GT G G W +N C
Sbjct: 142 ASVAAMIKGTLEAPSDRSVWLERGLQEWITFEGVDRLRVLGGGTLDGNGMQWW-INSCKL 200
Query: 125 NSDCQL---PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA------- 174
N + PT + + ++ DS H+ I ++ ++ L ITA
Sbjct: 201 NRSARCVTGPTALYLRRCTRLVVEELQVRDSMQMHVAIAYSRDVAVSRLSITAPAWSPNT 260
Query: 175 ---HADSSKDILVSE-----------------------VFCGPGQGISVGSLGKGIKDEE 208
H +S+++ +S +FCGPG GIS+GSLG
Sbjct: 261 DGIHVSNSREVSISRCTIATGDDCVSIVTGSTFVRVTSIFCGPGHGISIGSLGANNSWAH 320
Query: 209 VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
V + V T T+NGVR+KTW + G A +F DI M NV NPI+IDQ YC +
Sbjct: 321 VSDVLVEKATLLGTTNGVRIKTWQGGY-GYAERISFRDISMRNVTNPIIIDQNYCDSART 379
Query: 269 NIKPKDSMPNIEIGNRNLVYNGVN 292
+ RN+ Y ++
Sbjct: 380 TTPSSCHDQGSAVAVRNISYRNIH 403
>gi|297807483|ref|XP_002871625.1| hypothetical protein ARALYDRAFT_488306 [Arabidopsis lyrata subsp.
lyrata]
gi|297317462|gb|EFH47884.1| hypothetical protein ARALYDRAFT_488306 [Arabidopsis lyrata subsp.
lyrata]
Length = 421
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 131/285 (45%), Gaps = 48/285 (16%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGP-CKA 83
+NV D GA DG +DD+KAF+ +W+ A T+LVP G +LV F G CK
Sbjct: 50 TINVLDHGAKGDGKSDDTKAFEDAWKVACKV--AASTLLVPSGSTFLVGPISFLGKECKE 107
Query: 84 SISFQLQGLL------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFN 137
+I FQ+ G + S+ KG G+G W + + PT +RF
Sbjct: 108 NIVFQIDGKIIAPTSAKFKSLKGITIKGKGIIDGRGSVWWNNAKMPRTK----PTALRFY 163
Query: 138 FLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----------SKD------ 181
N T++GI +S H+ C +++++D ++ DS S+D
Sbjct: 164 GSNGVTVSGITIQNSPQTHLKFDNCKSIQVSDFTTSSPGDSPNTDGIHLQNSQDAVIYRS 223
Query: 182 -----------------ILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSN 224
I + +V CGPG GIS+G LGK V +TVR+ T T+N
Sbjct: 224 TLACGDDCISIQTGCSNINIHDVDCGPGHGISIGGLGKDNTKACVSNITVRDVTMHETTN 283
Query: 225 GVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCN 269
GVR+K+W G F +I ++NV NPI+IDQ YC C+
Sbjct: 284 GVRIKSWQGGS-GSVKQVMFSNIQVSNVANPIIIDQYYCDGGGCH 327
>gi|356522922|ref|XP_003530091.1| PREDICTED: probable polygalacturonase At3g15720-like [Glycine max]
Length = 543
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 142/312 (45%), Gaps = 65/312 (20%)
Query: 6 RFSLLVSFITSVRGIDA---TNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGT 62
F +VS + +R A TN + NV ++GA DG +DDS+AF +W+ G T
Sbjct: 160 HFLYMVSLLFILRDFCACVGTNTIYNVINYGAKGDGRSDDSQAFLRAWQSTCGAQG-AAT 218
Query: 63 VLVPPGK-YLVSFAEFEGPCKASISFQLQGLLDLFSIDTSLSLAKGTF------------ 109
+L+PP + +LVS +GPC A+I QL+G + + D + K T+
Sbjct: 219 LLIPPNRVFLVSSLILKGPCSAAIQIQLRGKIVAPAKDAWVGGYKYTWILISNINGLTIE 278
Query: 110 ------HGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCY 163
G G T W C + P + F N +++ + ++S HI I C
Sbjct: 279 GNGGLLDGDGSTWWACKNCPR------PAVLSFQSCNRLSVSYLNIINSPRAHIGINQCQ 332
Query: 164 NLKLNDLKITAHA----------DSSKDILVSEVF-----------------------CG 190
+++ I A +SS++I++ + F CG
Sbjct: 333 GAIFSNINIHAPGNSPNTDGIDINSSQNIMIRDSFIASGDDCIAITGSSSYINVTGIDCG 392
Query: 191 PGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMN 250
PG GIS+GSLG+ + + + V+NC FT T+NG R+KT+ G A TFE+I +
Sbjct: 393 PGHGISIGSLGRNY--DTIQEVHVQNCKFTSTTNGARIKTFAGGS-GYAKRITFEEITLI 449
Query: 251 NVENPIVIDQLY 262
NPI+IDQ Y
Sbjct: 450 QARNPIIIDQFY 461
>gi|356503452|ref|XP_003520522.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Glycine
max]
Length = 425
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 159/373 (42%), Gaps = 87/373 (23%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
+NV D+GA +G TDD+KAF+ +W+ + + ++VP G YL+ F GPCK + +
Sbjct: 27 VNVNDYGAKGNGSTDDTKAFNKAWQVVCSTG--EAILVVPQGNYLLKPIRFSGPCKPNFA 84
Query: 87 FQLQGLLDL------FSIDTSLSLAKGTFHG-----------QGETAWPLNQCHKNSD-- 127
Q+ G L+ +S D L G +W N C +N
Sbjct: 85 VQISGTLEASDDPSDYSGDNRHWLVFDNIQKLFVYGGGTINGNGNISWQ-NSCKRNKKLP 143
Query: 128 CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-------- 178
C+ PT + F D +K ++ H+ N+K++DLK+TA DS
Sbjct: 144 CKDAPTALSFYNCKDLIFENLKIENAXQIHVAFQDSVNVKVSDLKVTAPEDSPNTDGIHV 203
Query: 179 -------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDE 207
S+++ ++ CGPG GIS+GSL G K +
Sbjct: 204 TNTQNIQIXEPVYLYFCIIASGDDCICMVQGSRNVEATDNTCGPGHGISIGSLXAG-KSK 262
Query: 208 EVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
E+V + + + +R+KTW G ASN F++I M+NV NPI+I+Q YC + K
Sbjct: 263 EIVSGVLVDIAKIFGRSXIRIKTWQGGS-GSASNIQFQNIEMDNVTNPIIINQNYCDHKK 321
Query: 268 CNIKPKDSMPNIEIGNRN-----------------------LVYNGVNVKVEGPETTSLC 304
K + S I + +N +V +N++ EG ++C
Sbjct: 322 RPCKTQKSAIQINVLYQNITGTSTSDVAVKLACSENFPCQEIVLQNINLECEGDAAYAIC 381
Query: 305 SNVKPTLFGKQIP 317
+NV+ + G P
Sbjct: 382 NNVELSYLGHVNP 394
>gi|449450460|ref|XP_004142980.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
Length = 505
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 138/326 (42%), Gaps = 85/326 (26%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGP-CKA 83
+ NV DFGA +G TDD+KAF+ +W EA +G TV+VP + V F GP C+
Sbjct: 88 IFNVLDFGAKGNGETDDTKAFEDAWAEACKVEG--STVMVPADYVFFVGPISFSGPYCQP 145
Query: 84 SISFQL--------------QGLLDLFSIDTSLSL---AKGTFHGQGETAWPLNQCHKNS 126
I FQL +GLL + + G G+G W + +
Sbjct: 146 DIIFQLDGTIIAPTDHQTWGKGLLQWIQFTKLVGITIRGNGIIDGRGSVWWQDSSFDEPI 205
Query: 127 DCQL------------------------------PTPIRFNFLNDSTITGIKSVDSRYFH 156
D ++ PT +RF ++T+TGI +S H
Sbjct: 206 DDEMKLIIPVNNTINETKPTPIGSNLEGKMPSIKPTALRFYGSFNATVTGITIQNSPQCH 265
Query: 157 INILGCYNLKLNDLKITAHADS----------SKDILVSE-------------------- 186
+ C + ++D+ +++ DS SKD+L+
Sbjct: 266 LKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSCGDDCVSIQTGCSNIY 325
Query: 187 ---VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFT 243
V CGPG GIS+GSLGK V +TVR+ T T NGVR+KTW G N
Sbjct: 326 IHNVNCGPGHGISIGSLGKDHTKACVSNITVRDVTMHDTMNGVRIKTWQGGS-GSVQNVL 384
Query: 244 FEDIVMNNVENPIVIDQLYCPYNKCN 269
F +I M+ V+ PIVIDQ YC KC+
Sbjct: 385 FSNIQMSEVQLPIVIDQFYCDKAKCS 410
>gi|224058683|ref|XP_002299601.1| predicted protein [Populus trichocarpa]
gi|222846859|gb|EEE84406.1| predicted protein [Populus trichocarpa]
Length = 447
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 135/302 (44%), Gaps = 62/302 (20%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKA------FDTSWREAWNWDGIKGTVLVPPG-KYLVSF 74
++ RVL V DFGA DG+++D++A F +W A ++ G + +++P G +LV
Sbjct: 47 SSKRVLVVGDFGAKGDGLSNDTQACHHYTAFKEAWEMACSFRG-RTRIVIPAGYNFLVHP 105
Query: 75 AEFEGPCKASISFQLQGL------------------LDLFSIDTSLSLAKGTFHGQGETA 116
+F GPCK+ ++ + G L + GT +G+G
Sbjct: 106 VDFGGPCKSKVTLDISGTIVAPEDPAAWKGLNHRKWLYFHGVKHLTVEGGGTVNGRGWLW 165
Query: 117 WPLN-QCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA 174
W + + +K + C+ PT I F+ D + +K V + H+ C + +L +T+
Sbjct: 166 WAQSCKINKTNPCRNAPTAITFHKCKDLKVENLKVVCGQKMHVAFTNCLRVMTFNLIVTS 225
Query: 175 HADS---------------------------------SKDILVSEVFCGPGQGISVGSLG 201
A S S I + + CGPG GIS+GSLG
Sbjct: 226 PAVSPNTDGIHISASHGVKIKDSVVRTGDDCISIVSNSSRIKIRNIACGPGHGISIGSLG 285
Query: 202 KGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQL 261
K V + V + T NGVR+KTW G A+N TF++I M NV NPI+IDQ
Sbjct: 286 KSNSSSLVRDVMVDGAFLSNTDNGVRIKTWQGGG-GNATNITFQNIFMENVSNPIIIDQY 344
Query: 262 YC 263
YC
Sbjct: 345 YC 346
>gi|15223598|ref|NP_176064.1| pectin lyase-like protein [Arabidopsis thaliana]
gi|9954742|gb|AAG09093.1|AC009323_4 Putative polygalacturonase [Arabidopsis thaliana]
gi|332195306|gb|AEE33427.1| pectin lyase-like protein [Arabidopsis thaliana]
Length = 434
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 126/304 (41%), Gaps = 62/304 (20%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKY--LVSFAEFEGPCKA 83
V +V FGA+ D TDD+ AF +W A G K +L+ P + LV F GPC+
Sbjct: 47 VFDVTSFGAIGDCSTDDTSAFKMAWDAACMSTGPKSALLLVPYTFCFLVKPTTFNGPCRT 106
Query: 84 SISFQLQGLL-----------------DLFSIDTSLSL-AKGTFHGQGETAW-------- 117
++ Q+ G + +F LS+ G +G+G+ W
Sbjct: 107 NLVLQIDGFIVSPDGPRSWPSNYQRQWMMFYRVNGLSIQGSGVINGRGQKWWNLPCKPHK 166
Query: 118 PLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD 177
LN + C P IR + I GI ++S FH+ C ++ ++ + I A A
Sbjct: 167 GLNGTTQTGPCDSPVAIRLFQSSKVRIQGINFMNSAQFHVRFDNCSDVVVDSVIIKAPAS 226
Query: 178 SSK---------------------------------DILVSEVFCGPGQGISVGSLGKGI 204
S ++ + V CGP GIS+GSLG
Sbjct: 227 SPNTDGIHIENTHNVQIRNSMISNGDDCISIGAGCFNVDIKNVTCGPSHGISIGSLGVHN 286
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
V +TV N T + NGVR+KTW G S F +I+M NV NPI+IDQ YC
Sbjct: 287 SQAYVSNITVTNSTIWNSDNGVRIKTWQGGS-GSVSRIVFSNILMVNVRNPIMIDQYYCQ 345
Query: 265 YNKC 268
N C
Sbjct: 346 TNNC 349
>gi|449435888|ref|XP_004135726.1| PREDICTED: uncharacterized protein LOC101214300 [Cucumis sativus]
Length = 1858
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Query: 177 DSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHI 236
D SK + ++ V CGPG GIS+GSLGK +E V + V+NCT T+NGVR+KTWP S +
Sbjct: 269 DGSKRVKITNVTCGPGHGISIGSLGKYTNEEPVDDVVVKNCTIMNTTNGVRIKTWPSSPV 328
Query: 237 -GIASNFTFEDIVMNNVENPIVIDQLYCPYNKCN 269
GIA+N F DI M NV NPI+IDQ YCP+N+CN
Sbjct: 329 AGIATNMHFSDITMVNVSNPILIDQEYCPWNQCN 362
>gi|226502228|ref|NP_001150912.1| polygalacturonase precursor [Zea mays]
gi|195642914|gb|ACG40925.1| polygalacturonase precursor [Zea mays]
Length = 536
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 134/307 (43%), Gaps = 67/307 (21%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGP-CKA 83
V +V DFGA DG TDD+KAF +W A T+LVPP ++LV F GP CK
Sbjct: 137 VFSVVDFGAKGDGATDDTKAFQGAWAAACTQGA--STLLVPPELEFLVGPISFSGPYCKP 194
Query: 84 SISFQLQGL-----------------LDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNS 126
+I FQL+G L+ ++ + G +G+G+ W +
Sbjct: 195 NIVFQLEGTILAPISAKSWGSGLLQWLEFTKLNGVVIQGNGIINGRGQQWWTYSDPEDED 254
Query: 127 DCQL------------PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA 174
D PT +RF + ++GI V+S H+ C + ++D+ I++
Sbjct: 255 DDDTYHVEFQRMPQIKPTALRFYGSFNVVVSGITIVNSSQCHLKFDNCQGVMVHDVTISS 314
Query: 175 ----------HADSSKDILVSE-----------------------VFCGPGQGISVGSLG 201
H +SKD+ + V CGPG GIS+G LG
Sbjct: 315 PEKSLNTDGIHLQNSKDVSIHHTTLACGDDCISIQTGCSNINIHNVNCGPGHGISIGGLG 374
Query: 202 KGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQL 261
+ V +TVR+ T NGVR+KTW +G + F +I ++ V+ PI+IDQ
Sbjct: 375 RDNTKACVSNVTVRDVNMFRTMNGVRIKTW-QGGVGSVQDIRFSNIQVSEVQTPIIIDQF 433
Query: 262 YCPYNKC 268
YC + C
Sbjct: 434 YCDRSTC 440
>gi|62733049|gb|AAX95166.1| Polygalacturonase (pectinase) [Oryza sativa Japonica Group]
gi|77549576|gb|ABA92373.1| Polygalacturonase precursor, putative, expressed [Oryza sativa
Japonica Group]
Length = 393
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 140/344 (40%), Gaps = 86/344 (25%)
Query: 57 DGIKGTVLVPPGKYLVSFAEFEGPCKAS--ISFQLQGLLDL-----------FSIDTSLS 103
DG + + VP G +LV A F GPC+++ + + G + F L+
Sbjct: 57 DGERPVMRVPAGTFLVGRAYFRGPCRSAGGVVLAIDGTVVAPPAVGNASWITFHYAHGLA 116
Query: 104 LAKGTFHGQGETAWPLNQCHKNSDCQLP---TPIRFNFLNDSTITGIKSVDSRYFHINIL 160
+ GT G G W C + + P T + + N+ ++ + VDS+ H++I
Sbjct: 117 IRGGTLDGNGHAFW---ACKAAAGRRCPPGTTTLDISQSNNVSVKRVTLVDSKNVHVSIF 173
Query: 161 GCYNLKLNDLKITAHADS----------SKDILV-----------------------SEV 187
C + L ++I A ADS S+D+ V +
Sbjct: 174 DCAGVTLQGVRIAAPADSPNTDGIHVALSRDVAVLSATVRTGDDCVSVGPGTSGVAIRNI 233
Query: 188 FCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDI 247
CGPG GIS+GSLG + EV +TV + + T NG+R+KTW G S F ++
Sbjct: 234 RCGPGHGISIGSLGGRAGEGEVRNVTVESASLAGTQNGLRIKTWGKPFAGRVSGVRFANV 293
Query: 248 VMNNVENPIVIDQLYCPYN------KCNIKPKD----------------------SMP-- 277
M +V+NPIV+DQ YCP N +K D S P
Sbjct: 294 AMRDVQNPIVVDQNYCPGNVNCPGQSSGVKISDVEYEGITGTSATAVAVRFDCSGSNPCT 353
Query: 278 NIEIGNRNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 321
I + N NL Y+G G S C N + G IP +C+
Sbjct: 354 GIRLRNINLTYDGGG----GKPARSFCKNAGGSASGVVIPPSCL 393
>gi|116792819|gb|ABK26513.1| unknown [Picea sitchensis]
gi|148907395|gb|ABR16831.1| unknown [Picea sitchensis]
Length = 429
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 142/328 (43%), Gaps = 59/328 (17%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK 60
LLL FS I S+ +DA+ V +V +GA +G++DDS+AF +W A
Sbjct: 20 LLLCTGFSTEGPLIKSLD-LDASAAVFSVDSYGAKGNGVSDDSQAFLAAWNAACT-SSSD 77
Query: 61 GTVLVPPGK-YLVSFAEFEGPCK-----ASISFQLQGLLD-------------LFSIDTS 101
LVP GK YLV F GPCK A IS ++ D FS
Sbjct: 78 SIFLVPHGKTYLVKPINFNGPCKTVHLTAQISGKIVAPADPCKWNPKERSVWLQFSNVQG 137
Query: 102 LSL-AKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTI--TGIKSVDSRYFHIN 158
L++ G G GE W + S L P F + S + + +S H+
Sbjct: 138 LTIHGGGIIDGSGEKWWAGSCSRDTSHRCLNVPTAFVLYSSSNVHLRDLTFQNSPKIHVQ 197
Query: 159 ILGCYNLKLNDLKITAHADS---------------------------------SKDILVS 185
I ++++ +L+I A DS S +I +S
Sbjct: 198 IALSTHVQVENLQIVAPGDSPNTDGIHLSISEHVMIQNCTIATGDDCISIVAESSNIQIS 257
Query: 186 EVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFE 245
E+ CGPG GIS+GSLGK + V + V + + T NG+R+KTW G A F+
Sbjct: 258 ELICGPGHGISIGSLGKYNTKDTVSDVVVNGASLSGTQNGLRIKTWQGGS-GYAQGIIFQ 316
Query: 246 DIVMNNVENPIVIDQLYC-PYNKCNIKP 272
+ M NV NPI+I+Q YC P + C +P
Sbjct: 317 HVKMINVSNPIIINQNYCAPSSSCQNQP 344
>gi|158442660|gb|ABW38780.1| dehiscence polygalacturonase [Solanum lycopersicum]
Length = 392
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 140/290 (48%), Gaps = 55/290 (18%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
+NV FGA DG DD+ AF +W+EA + + V+ KYL+ +F GPCK+SI+
Sbjct: 16 INVDSFGAKGDGSIDDTNAFQKAWKEACSSSHVVNFVVSQNKKYLLKPIKFYGPCKSSIT 75
Query: 87 FQLQGLLDLFSIDTS------------------LSLAKGTFHGQGETAWPLN-QCHKNSD 127
Q+ G L L S DTS + G +G G+ W + + +K
Sbjct: 76 MQIYGTL-LASDDTSDYKKDSRHWLIFDSVQKLVVGGAGVINGNGKIWWQHSCKINKKLP 134
Query: 128 CQL-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH----------- 175
C++ PT + F N+ + +K +++ H+ I C +++ L +T+
Sbjct: 135 CKVAPTALTFYKCNNLKVKDLKIENAQQIHLLIEKCVGVEVTKLVVTSPENSPNTDGIHI 194
Query: 176 ----------------------ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLT 213
D S+ +L + + CGPG GIS+GSLG G + V +
Sbjct: 195 TSTQNIQISDSTIATGDDCISIVDGSQKVLATGITCGPGHGISIGSLGGGNSEAHVSDIH 254
Query: 214 VRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
V T+NG+R+KTWP G ASN ++++VMNNV+NPI+IDQ YC
Sbjct: 255 VNGAKLYETTNGLRIKTWPGG-FGSASNIKYQNVVMNNVKNPIIIDQNYC 303
>gi|15231579|ref|NP_189293.1| putative polygalacturonase / pectinase [Arabidopsis thaliana]
gi|1402880|emb|CAA66811.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|9293940|dbj|BAB01843.1| polygalacturonase [Arabidopsis thaliana]
gi|26450320|dbj|BAC42276.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332643664|gb|AEE77185.1| putative polygalacturonase / pectinase [Arabidopsis thaliana]
Length = 470
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 135/300 (45%), Gaps = 60/300 (20%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGPCKAS 84
V N+ +GA DG++DDSKA +W+ A G G V +P G ++LV +GPCK
Sbjct: 66 VFNIFSYGAKGDGVSDDSKALVGAWKAACKVVG--GKVEIPAGTQFLVKAVTLQGPCKEE 123
Query: 85 ISFQLQGLLDL-----------------FSIDTSLSL-AKGTFHGQGETAWPLNQCHKNS 126
Q++G+L F + L++ GT +G+G W L+ +
Sbjct: 124 TVVQIEGILVAPEKIGSWPNSSLFQWLNFKWVSHLTIQGSGTLNGRGYNWWNLDTYQTQT 183
Query: 127 DCQL-----PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--- 178
+ PT +RF N+ T+ I V+S H+ +K+N++ I++ +S
Sbjct: 184 RNKYIPPMKPTALRFYSSNNVTVRDISIVNSPLCHLKFDDSDGVKVNNITISSPENSPNT 243
Query: 179 ------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEE 208
S ++ + + CGPG GIS+G LGK
Sbjct: 244 DGIHLQNTRNVEIQHSNIACGDDCVSIQTGSSNVHIHHINCGPGHGISIGGLGKDKSVAC 303
Query: 209 VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
V + V + + T GVR+KTW +G+ N TF +I + +V+ PIVIDQ YC +KC
Sbjct: 304 VSDIIVEDISIQNTLAGVRIKTW-QGGLGVVKNLTFSNIQVKDVKVPIVIDQYYCDKSKC 362
>gi|356565972|ref|XP_003551209.1| PREDICTED: probable polygalacturonase At1g80170-like [Glycine max]
Length = 460
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 133/308 (43%), Gaps = 59/308 (19%)
Query: 11 VSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK- 69
+S I S R ++N+ FGA DG +DD++A +W A + K +L+P G+
Sbjct: 51 LSDIPSWRSERGGKVLVNIDSFGAAGDGESDDTEALQKAWGVACSTP--KSVLLIPQGRR 108
Query: 70 YLVSFAEFEGPCKASISFQLQGLL------------------DLFSIDTSLSLAKGTFHG 111
YLV+ F+GPC + Q+ G L D ++ ++ G G
Sbjct: 109 YLVNATRFKGPCADKLIIQIDGTLVAPDEPKNWDPKLPRVWLDFSKLNKTVFQGSGVIDG 168
Query: 112 QGETAWPLNQCHKNSD--CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLN 168
G W + C KN C+ PT + + + G+ +S+ H I C ++++
Sbjct: 169 SGSKWWAAS-CKKNKSNPCKGAPTAFTIDTSSSIRVKGLTIQNSQQMHFTISRCDSVRIT 227
Query: 169 DLKITAHADS---------------------------------SKDILVSEVFCGPGQGI 195
+K++A DS S +I + ++CGPG GI
Sbjct: 228 SVKVSAPGDSPNTDGIHISESTNVIIQDSKIGTGDDCISIVNASSNIKMKRIYCGPGHGI 287
Query: 196 SVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENP 255
S+GSLGK V + + T+NGVR+KTW G F+++ + NV NP
Sbjct: 288 SIGSLGKDNSTGIVTKVILDTAVLRETTNGVRIKTWQGGS-GYVRGVRFQNVRVENVSNP 346
Query: 256 IVIDQLYC 263
I+IDQ YC
Sbjct: 347 IIIDQFYC 354
>gi|297837451|ref|XP_002886607.1| hypothetical protein ARALYDRAFT_893483 [Arabidopsis lyrata subsp.
lyrata]
gi|297332448|gb|EFH62866.1| hypothetical protein ARALYDRAFT_893483 [Arabidopsis lyrata subsp.
lyrata]
Length = 538
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 138/331 (41%), Gaps = 86/331 (25%)
Query: 21 DATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEG 79
D ++ NV DFGA DG++DD++AF+ +W A + T+++PP +LV F G
Sbjct: 115 DGDSQEFNVLDFGAKGDGMSDDTEAFEAAWASACKVEA--STMIIPPDYIFLVGPISFSG 172
Query: 80 P-CKASISFQLQGLL-----------------DLFSIDTSLSLAKGTFHGQGETAW---- 117
P C+ +I FQL G++ + + KG G+G W
Sbjct: 173 PYCQGNIVFQLDGMIVAPTDTESWGGGLMWWIEFTKLKGITIQGKGVIDGRGTVWWQQDY 232
Query: 118 --------------PLNQCHKNSDCQ-------------LPTPIRFNFLNDSTITGIKSV 150
PLN + PT +RF D T+TGI
Sbjct: 233 LSDYPIDDDFKLIVPLNNSVQERPPMPIRSELNWRMPSIKPTALRFYGSIDVTVTGITIQ 292
Query: 151 DSRYFHINILGCYNLKLNDLKITAHADS----------SKDIL----------------- 183
+S H+ C + ++D+ +++ DS +KD++
Sbjct: 293 NSPQCHLKFDNCVQVLVHDVNVSSPGDSPNTDGIHLQNTKDVMIHTTTLACGDDCISIQT 352
Query: 184 ------VSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIG 237
V V CGPG GIS+GSLGK V +TVR+ T GVR+KTW IG
Sbjct: 353 GCSNVYVHNVNCGPGHGISIGSLGKDSTKACVSNITVRDVVMHNTMTGVRIKTW-QGGIG 411
Query: 238 IASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
F +I + V+ PIVIDQ YC ++KC
Sbjct: 412 SVKGILFSNIQLTEVQLPIVIDQFYCDHSKC 442
>gi|28411798|dbj|BAC57273.1| putative polygalacturonase PG1 [Oryza sativa Japonica Group]
gi|50508418|dbj|BAD30433.1| putative polygalacturonase PG1 [Oryza sativa Japonica Group]
Length = 422
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 139/300 (46%), Gaps = 56/300 (18%)
Query: 18 RGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAE 76
R +++ V +V+ GA DG DD+KA +W A + VL+P GK YL
Sbjct: 44 RSLESKKVVFDVRKHGAYGDGQHDDTKALAKAWAAACS-SSQPSIVLIPKGKRYLTKHIT 102
Query: 77 FEGPCKASISFQLQGLL-----------------DLFSIDTSLSLAKGTFHGQGETAWPL 119
GPCK+SI+F ++G L +F+ + L++A G + W
Sbjct: 103 LSGPCKSSITFMIEGTLVAPPKRSDWSKETIRHWIMFNGVSGLTVAGGGTVDENGKIWWQ 162
Query: 120 NQCHKNSD---CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA-- 174
N C N+ + PT + F ++ + +K ++S+ H+++ C +++++ L ITA
Sbjct: 163 NSCKTNAKLPCTEAPTALTFYSCSNLKVENLKLLNSQQIHMSVEDCTDVRISSLTITAPG 222
Query: 175 --------HADSSKDILVS-----------------------EVFCGPGQGISVGSLGKG 203
H SK++ V+ + CGPG GIS+GSLG
Sbjct: 223 TSPNTDGIHITRSKNVQVTGCIIKTGDDCMSIEDGTENLHVKNMVCGPGHGISIGSLGDH 282
Query: 204 IKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
+ V +TV T+NG R+KTW G A N F++++M NV NPI+IDQ YC
Sbjct: 283 NSEAHVNNVTVDTVRLYGTTNGARIKTWQGG-WGYAKNIVFQNMIMENVWNPIIIDQNYC 341
>gi|255560874|ref|XP_002521450.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223539349|gb|EEF40940.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 466
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 131/305 (42%), Gaps = 66/305 (21%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGP-CKAS 84
NV D+GA DG TDD+KAF+ +W A + T++VP G +LV F GP C +
Sbjct: 77 FNVLDYGAKGDGRTDDTKAFEAAWIAACKVEA--STIVVPSGSMFLVHPISFSGPACAEN 134
Query: 85 ISFQLQG-----------------LLDLFSIDTSLSLAKGTFHGQGETAW---PLNQCHK 124
I FQL G ++ + KG GQG W P H
Sbjct: 135 IVFQLDGKIIAPTSATAWGSGLLQWIEFTKLKGITIKGKGIIDGQGSVWWNDLPAYSPHS 194
Query: 125 NSDCQL--------PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA-- 174
+L PT +RF D T+TGI +S H+ C +++++ +
Sbjct: 195 EVAGELNAKMPGTKPTALRFYGSTDVTVTGITIQNSPQTHLKFDDCTGVQVSEFTAASPE 254
Query: 175 --------HADSSKDILV------------------SEVF-----CGPGQGISVGSLGKG 203
H +S+D+++ S V+ CGPG GIS+G LGK
Sbjct: 255 NSPNTDGIHLQNSRDVVIYSSDLSCGDDCVSIQTGCSNVYIHNVNCGPGHGISIGGLGKD 314
Query: 204 IKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
V +TVR+ T GVR+KTW G TF +I ++ VE PI+IDQ YC
Sbjct: 315 NTKACVSNVTVRDVQMQNTLTGVRIKTWQGGS-GSVQGVTFSNIQVSGVETPIMIDQFYC 373
Query: 264 PYNKC 268
+KC
Sbjct: 374 DGSKC 378
>gi|238014976|gb|ACR38523.1| unknown [Zea mays]
gi|413946312|gb|AFW78961.1| hypothetical protein ZEAMMB73_374088 [Zea mays]
Length = 382
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 154/364 (42%), Gaps = 66/364 (18%)
Query: 18 RGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAE 76
RG +A +L + DFG V DGI +D++A +W A + + + VP GK Y + +
Sbjct: 22 RGAEA-RVLLTLDDFGGVGDGIANDTQALLDAWAAACS-STQEAVLAVPAGKVYQIWPVQ 79
Query: 77 FEGPCKASISFQLQGL------------------LDLFSIDTSLSLAKGTFHGQGETAWP 118
GPCK + + G L ++ +D GT G G+ W
Sbjct: 80 LSGPCKKRLKLLISGAIVAPSSPDEWAGRDPMKWLYVYGVDGLSVSGGGTIDGMGQQWW- 138
Query: 119 LNQCH--KNSDC---QLPTPIRFNFLNDST----ITGIKSVDSRYFHINILGCYNLKLND 169
+ C K C P + F +++ + S ++ H+N ++++ D
Sbjct: 139 ASTCKRKKTQPCYSGPRPKAVHFEECREASFLRVVAPADSPNTDGIHLNDTS--HVRITD 196
Query: 170 LKITAHAD------SSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTS 223
I+ D + D+ V ++ CGPG GIS+GSLGK + V + V C T T+
Sbjct: 197 NLISTGDDCVSMVGNCSDVRVKDISCGPGHGISIGSLGKNRTTDMVEDVKVDTCLLTNTT 256
Query: 224 NGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC--PYNKCNIKPKDSMPNIEI 281
NGVR+K+W G A + FE+IVM NV NPI+IDQ YC P N + +E
Sbjct: 257 NGVRIKSW-QGGTGFARDLRFENIVMRNVSNPIIIDQYYCDQPTPCANQTQAVEVRRVEF 315
Query: 282 GN---------------------RNLVYNGVNVKVEG---PETTSLCSNVKPTLFGKQIP 317
R+L VN+ +EG T+LC G +P
Sbjct: 316 AGIRGTSATPQAISIACSDAVPCRDLELANVNLTLEGGGAGRATALCYRASGKSAGTVVP 375
Query: 318 ATCV 321
+C+
Sbjct: 376 PSCL 379
>gi|125599501|gb|EAZ39077.1| hypothetical protein OsJ_23509 [Oryza sativa Japonica Group]
Length = 498
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 138/300 (46%), Gaps = 56/300 (18%)
Query: 18 RGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAE 76
R +++ V +V+ GA DG DD+KA +W A + VL+P GK YL
Sbjct: 44 RSLESKKVVFDVRKHGAYGDGQHDDTKALAKAWAAACS-SSQPSIVLIPKGKRYLTKHIT 102
Query: 77 FEGPCKASISFQLQGLL-----------------DLFSIDTSLSLAKGTFHGQGETAWPL 119
GPCK+SI+F ++G L +F+ + L++A G + W
Sbjct: 103 LSGPCKSSITFMIEGTLVAPPKRSDWSKETIRHWIMFNGVSGLTVAGGGTVDENGKIWWQ 162
Query: 120 NQCHKNSD---CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 176
N C N+ + PT + F ++ + +K ++S+ H+++ C +++++ L ITA
Sbjct: 163 NSCKTNAKLPCTEAPTALTFYSCSNLKVENLKLLNSQQIHMSVEDCTDVRISSLTITAPG 222
Query: 177 ---------------------------------DSSKDILVSEVFCGPGQGISVGSLGKG 203
D ++++ V + CGPG GIS+GSLG
Sbjct: 223 TSPNTDGIHITRSKNVQVTGCIIKTGDDCMSIEDGTENLHVKNMVCGPGHGISIGSLGDH 282
Query: 204 IKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
+ V +TV T+NG R+KTW G A N F++++M NV NPI+IDQ YC
Sbjct: 283 NSEAHVNNVTVDTVRLYGTTNGARIKTWQGG-WGYAKNIVFQNMIMENVWNPIIIDQNYC 341
>gi|42562835|ref|NP_564758.2| Pectin lyase-like protein [Arabidopsis thaliana]
gi|2462753|gb|AAB71972.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332195579|gb|AEE33700.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 540
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 143/328 (43%), Gaps = 86/328 (26%)
Query: 24 NRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGP-C 81
++ NV DFGA DG++DD++AF+ +W A + T+++PP +LV F GP C
Sbjct: 120 SQQFNVLDFGAKGDGMSDDTQAFEAAWASACKVEA--STMIIPPDYIFLVGPISFSGPYC 177
Query: 82 KASISFQLQGLLD------------LFSID-TSLS----LAKGTFHGQGETAW------- 117
+A+I FQL+G++ ++ I+ T LS G G+G W
Sbjct: 178 QANIVFQLEGMIVAPTDTESWGGGLMWWIEFTKLSGITIQGNGVIDGRGTVWWQQDYLSD 237
Query: 118 -----------PLNQCHKNSDCQ-------------LPTPIRFNFLNDSTITGIKSVDSR 153
PLN + PT +RF D T+TGI +S
Sbjct: 238 YPIDDDFKLIVPLNNSVQERPPMPIRSELNWRMPSIKPTALRFYGSIDVTVTGITIQNSP 297
Query: 154 YFHINILGCYNLKLNDLKITAHADS----------SKDIL-------------------- 183
H+ C + ++D+ +++ DS ++D++
Sbjct: 298 QCHLKFDNCVKVLVHDVNVSSPGDSPNTDGIHLQNTRDVMIHTTTLACGDDCISIQTGCS 357
Query: 184 ---VSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIAS 240
V V CGPG GIS+GSLGK V +TVR+ T GVR+KTW IG
Sbjct: 358 NVYVHNVNCGPGHGISIGSLGKDSTKACVSNITVRDVVMHNTMTGVRIKTW-QGGIGSVK 416
Query: 241 NFTFEDIVMNNVENPIVIDQLYCPYNKC 268
F +I + V+ PIVIDQ YC ++KC
Sbjct: 417 GILFSNIQLTEVQLPIVIDQFYCDHSKC 444
>gi|226490390|dbj|BAH56488.1| polygalacturonase 1 [Prunus persica]
Length = 510
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 139/317 (43%), Gaps = 76/317 (23%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGP-CKA 83
V NV D+GA DG DD+KAF+T+W A T+ VP G +LV F GP C+A
Sbjct: 100 VFNVLDYGAKGDGKADDTKAFETAWAAACKVPA--STINVPSGSVFLVKPISFSGPNCEA 157
Query: 84 SISFQL--------------QGLLDL--FSIDTSLSL-AKGTFHGQGETAW--------- 117
+I FQL GLL F+ +S+ KG GQG W
Sbjct: 158 NIVFQLDGKIIAPTSSGDWGSGLLQWLEFTKLKGISIKGKGVIDGQGSVWWSDSPTTYNI 217
Query: 118 PLNQCHKNSDCQL------------PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNL 165
P +Q + +S + PT +RF + ++TGI +S H+ C N+
Sbjct: 218 PADQTYSSSQDTVIESDSGKMPSTKPTALRFYGSDGVSVTGITLQNSPQTHLKFDACTNV 277
Query: 166 KLNDLKITAHADS----------SKDIL-----------------------VSEVFCGPG 192
+++D+ I++ DS S+D++ V V CGPG
Sbjct: 278 QVSDISISSPGDSPNTDGIHLQNSQDVVIFGTSIACGDDCISIQTGCSNIYVHNVNCGPG 337
Query: 193 QGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNV 252
G+S+ LGK V +TVR+ T GVR+KTW G N F +I ++ V
Sbjct: 338 HGVSIVGLGKDNTRACVSNVTVRDVKMHNTLTGVRIKTWQGGS-GSVQNIMFSNIQVSEV 396
Query: 253 ENPIVIDQLYCPYNKCN 269
PI+IDQ YC +KC
Sbjct: 397 ATPIMIDQFYCDKSKCQ 413
>gi|399764474|gb|AFP50437.1| polygalacturonase 11a, partial [Medicago tornata]
Length = 151
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Query: 176 ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSH 235
D S+ I V V CGPG GISVGSLG+ ++ V G+TV+NCT T T NGVR+KTWPD+
Sbjct: 55 GDGSRKITVQGVKCGPGHGISVGSLGRYTTEDNVEGVTVKNCTLTATQNGVRIKTWPDAP 114
Query: 236 IGIAS-NFTFEDIVMNNVENPIVIDQLYCPYNKCNIK 271
I + FEDI MNNV NPI+IDQ YCP+N CN K
Sbjct: 115 GTITVFDIHFEDITMNNVLNPIIIDQEYCPWNACNKK 151
>gi|297743417|emb|CBI36284.3| unnamed protein product [Vitis vinifera]
Length = 441
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 138/331 (41%), Gaps = 72/331 (21%)
Query: 2 LLAARFSLLVSFITSVRGIDA--------------TNRVLNVKDFGAVADGITDDSKAFD 47
L+ F LV F+ +V G + ++L V FGA DG+ DD+ AF
Sbjct: 12 LICTVFIFLVLFLINVEGFEPLIQLPHSPAARPRLETKILYVNQFGAKGDGVQDDTDAFR 71
Query: 48 TSWREAWNWDGIKGTVLVPP-GKYLVSFAEFEGPCKASISFQLQGL-------------- 92
+W+ A K ++++P K+LV F GPC+A ++ + G
Sbjct: 72 NAWKIACA-SITKASIVIPHDKKFLVRPISFGGPCRAKVTVTISGTIIAPKDPDVWHGLN 130
Query: 93 ----LDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSD--CQ-LPTPIRFNFLNDSTIT 145
L ++ G +G+G W C N+ C+ PT I F+ +
Sbjct: 131 PQKWLYFHGVNHLTVRGSGIINGRGHKWWS-QSCKINATNPCEHAPTAIIFHRCKKLRVR 189
Query: 146 GIKSVDSRYFHINILGCYNLKLNDLKITAHADS--------------------------- 178
I ++S+ HI + + ++ +K+ A A S
Sbjct: 190 DIALINSQRTHIAFTNSFRIVVSGIKMIAPASSPNTDGLHISSSSRVNIKDSIIRTGDDC 249
Query: 179 ------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWP 232
S I + + CGPG GISVGSLG G +V + V T NG+R+KTW
Sbjct: 250 ISIVGNSSIIRIKNIACGPGHGISVGSLGMGNSWAQVHDVIVDQAFLAHTKNGLRIKTWQ 309
Query: 233 DSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
G AS TF++++M NV +PI+IDQ YC
Sbjct: 310 GGR-GFASQITFQNVLMENVSHPIIIDQYYC 339
>gi|16974585|gb|AAL31197.1| At1g60590/F8A5_12 [Arabidopsis thaliana]
gi|23308417|gb|AAN18178.1| At1g60590/F8A5_12 [Arabidopsis thaliana]
Length = 474
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 143/328 (43%), Gaps = 86/328 (26%)
Query: 24 NRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGP-C 81
++ NV DFGA DG++DD++AF+ +W A + T+++PP +LV F GP C
Sbjct: 54 SQQFNVLDFGAKGDGMSDDTQAFEAAWASACKVEA--STMIIPPDYIFLVGPISFSGPYC 111
Query: 82 KASISFQLQGLLD------------LFSID-TSLS----LAKGTFHGQGETAW------- 117
+A+I FQL+G++ ++ I+ T LS G G+G W
Sbjct: 112 QANIVFQLEGMIVAPTDTESWGGGLMWWIEFTKLSGITIQGNGVIDGRGTVWWQQDYLSD 171
Query: 118 -----------PLNQCHKNSDCQ-------------LPTPIRFNFLNDSTITGIKSVDSR 153
PLN + PT +RF D T+TGI +S
Sbjct: 172 YPIDDDFKLIVPLNNSVQERPPMPIRSELNWRMPSIKPTALRFYGSIDVTVTGITIQNSP 231
Query: 154 YFHINILGCYNLKLNDLKITAHADS----------SKDIL-------------------- 183
H+ C + ++D+ +++ DS ++D++
Sbjct: 232 QCHLKFDNCVKVLVHDVNVSSPGDSPNTDGIHLQNTRDVMIHTTTLACGDDCISIQTGCS 291
Query: 184 ---VSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIAS 240
V V CGPG GIS+GSLGK V +TVR+ T GVR+KTW IG
Sbjct: 292 NVYVHNVNCGPGHGISIGSLGKDSTKACVSNITVRDVVMHNTMTGVRIKTW-QGGIGSVK 350
Query: 241 NFTFEDIVMNNVENPIVIDQLYCPYNKC 268
F +I + V+ PIVIDQ YC ++KC
Sbjct: 351 GILFSNIQLTEVQLPIVIDQFYCDHSKC 378
>gi|42566242|ref|NP_192098.2| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|332656691|gb|AEE82091.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 468
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 147/351 (41%), Gaps = 74/351 (21%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAW--NWDGIKGTVLVPPG-KYLVSFAEFEGPCK 82
V +V+ +GAV +G+ DD+ +F T+W A N + + VP G +++ F GPC+
Sbjct: 64 VYDVRKYGAVGNGVADDTVSFKTAWDSACSNNKNNTASVLHVPYGFTFMIRSTIFTGPCR 123
Query: 83 ASISFQLQGL-------------------LDLFSIDTSLSLAKGTFHGQGETAWPL---- 119
+ FQ+ G L + I+ G G+G+ W L
Sbjct: 124 SYQYFQVDGTIVPRDGPKSWPSSLNKRQWLAFYRINGMALQGAGVIDGRGQNWWDLPCKP 183
Query: 120 -----NQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA 174
N+ C+ P +RF ++ + G+ +S H+ + GC+ + +N L+I +
Sbjct: 184 HQQNVNKTKLAGPCESPAALRFFMSSNVIVKGLSIKNSPQVHLKLDGCHVVHINSLRIIS 243
Query: 175 ----------HADSSK-----------------------DILVSEVFCGP-GQGISVGSL 200
H ++S DI + + CGP G GIS+GSL
Sbjct: 244 PPASPNTDGIHIENSNSVEIYNSVISNGDDCVSIGPGAYDIDIRNITCGPGGHGISIGSL 303
Query: 201 GKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQ 260
G+ V +TVR+ + NGVR+KTW G S TF++I ++ V NPI+IDQ
Sbjct: 304 GEKNSHACVSNVTVRDSFIKFSENGVRIKTWQGGS-GSVSGVTFDNIHVDTVRNPIIIDQ 362
Query: 261 LYCPYNKCNIKPKDSMPNIEIGNRNLVYNGVN--VKVEGPETTSLCSNVKP 309
YC C K N ++VY + + P CSN P
Sbjct: 363 YYCTTKSCANKTSAVFVN------DIVYQSIKGTYDIRSPPMHFGCSNNVP 407
>gi|15241460|ref|NP_196969.1| polygalacturonase [Arabidopsis thaliana]
gi|7573314|emb|CAB87632.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332004675|gb|AED92058.1| polygalacturonase [Arabidopsis thaliana]
Length = 435
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 132/296 (44%), Gaps = 56/296 (18%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGP-CKA 83
+NV D GA DG +DD+KAF+ +W+ A T+LVP G +LV F G CK
Sbjct: 50 TINVLDHGAKGDGTSDDTKAFEDAWQVACKV--AASTLLVPSGSTFLVGPVSFLGKECKE 107
Query: 84 SISFQLQG-----------------LLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNS 126
I FQL+G ++ ++ KG G+G W K
Sbjct: 108 KIVFQLEGKIIAPTSASAWGSGLLQWIEFKALQGITIKGKGIIDGRGSVWWNDMMGTKMP 167
Query: 127 DCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-------- 178
+ PT +RF N T++GI +S H+ C +++++D ++ DS
Sbjct: 168 RTK-PTALRFYGSNGVTVSGITIQNSPQTHLKFDNCISIQVSDFTTSSPGDSPNTDGIHL 226
Query: 179 --SKD-----------------------ILVSEVFCGPGQGISVGSLGKGIKDEEVVGLT 213
S+D I + +V CGPG GIS+G LGK V +T
Sbjct: 227 QNSQDAVIYRSTLACGDDCISIQTGCSNINIHDVDCGPGHGISIGGLGKDNTKACVSNIT 286
Query: 214 VRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCN 269
VR+ T T+NGVR+K+W G F +I ++NV NPI+IDQ YC C+
Sbjct: 287 VRDVTMHETTNGVRIKSWQGGS-GSVKQVMFSNIQVSNVANPIIIDQYYCDGGGCH 341
>gi|356569547|ref|XP_003552961.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Glycine
max]
Length = 274
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 93/192 (48%), Gaps = 35/192 (18%)
Query: 112 QGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
+G W ++C KN C+ L F FLN++ I I + S+ FH+N+LG N+ +
Sbjct: 17 EGAIVWNQDKCGKNKHCKKLSMNFDFGFLNNTIIRDITTKYSKKFHVNVLGYNNIIFTNF 76
Query: 171 KITAHA---------------------------------DSSKDILVSEVFCGPGQGISV 197
I A D SK I V CGP GISV
Sbjct: 77 NIITRATSPNTDGIHIGRSTXVNITSINIATDDDCISLGDGSKQIHVLNDTCGPWHGISV 136
Query: 198 GSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWP-DSHIGIASNFTFEDIVMNNVENPI 256
GSL K +E V GLTVRNCT T NGVR+KT P + + FEDI M NV NPI
Sbjct: 137 GSLEKYPNEELVKGLTVRNCTLNNTDNGVRIKTXPGNPRTTXVIDMHFEDINMVNVMNPI 196
Query: 257 VIDQLYCPYNKC 268
+IDQ YCP+N+C
Sbjct: 197 IIDQDYCPWNQC 208
>gi|108864194|gb|ABA92372.2| Polygalacturonase family protein, expressed [Oryza sativa Japonica
Group]
Length = 347
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 109/247 (44%), Gaps = 49/247 (19%)
Query: 68 GKYLVSFAEFEGPCKA-SISFQLQG-------------LLDLFSIDTSLSLAKGTFHGQG 113
G YLVS A F GPC++ +++ + G L +F +S+A GT G+G
Sbjct: 77 GVYLVSRARFAGPCRSGAVAVNMTGATVVAPVPYAGVQLWIVFQDVDGVSVAGGTLDGRG 136
Query: 114 ETAWPLNQCHKNSDCQLPT-PIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKI 172
W + + DC T + + + G+ S DS HI + + + D +
Sbjct: 137 RALWACRRARR-PDCPPATRSLTIYRSRNVAVRGLTSRDSAGIHITVQASAGVAIVDTVV 195
Query: 173 TAHADS---------------------------------SKDILVSEVFCGPGQGISVGS 199
+A S S D+L+ V CGPG GIS+GS
Sbjct: 196 SAPGRSPNTDGIHIKQSTGVTVRNAVIGTGDDCVSMVEGSSDVLIEAVTCGPGHGISIGS 255
Query: 200 LGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVID 259
LG + V +TV+ T+NG+R+KTW ++ G + +F +VM NV NPI++D
Sbjct: 256 LGDTPEQVAVRNITVKGAALAGTTNGLRIKTWAKANAGAVAGVSFSGVVMRNVSNPIIVD 315
Query: 260 QLYCPYN 266
Q YCP N
Sbjct: 316 QNYCPGN 322
>gi|6573750|gb|AAF17670.1|AC009398_19 F20B24.8 [Arabidopsis thaliana]
Length = 542
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 140/337 (41%), Gaps = 97/337 (28%)
Query: 24 NRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGP-C 81
++V NV DFGA DG DD+KAF+ +W A + +LVPP YLV F GP C
Sbjct: 116 SQVFNVMDFGAKGDGKCDDTKAFEAAWVAACKIEA--SVMLVPPEYTYLVGPISFSGPYC 173
Query: 82 KASISFQLQG-----------------LLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHK 124
+A+I FQL G +D + KG G+G W +
Sbjct: 174 QANIVFQLDGTIIAPTDSKTWGKGLMWWIDFTKLKGIKVQGKGVIDGRGSGWWQQDSPFI 233
Query: 125 NSDCQL------------PTPIRFNFLNDSTITGIK-SVDSRYFHINIL----------- 160
+SD +L P PIR D + IK +V +RY+H I
Sbjct: 234 DSDTKLIVPLNNSANQNPPMPIRSEL--DERMPSIKPTVRNRYWHCEIALRFSGSFGVEV 291
Query: 161 ----------------GCYNLKLNDLKITAHADS----------SKDILV---------- 184
C + ++D+ +++ DS +KD+L+
Sbjct: 292 TGITIQNSPQCHLKFDDCVGVVVHDIAVSSPGDSPNTDGIHLQNTKDVLIHSTTLACGDD 351
Query: 185 --------SEVF-----CGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTW 231
S VF CGPG GIS+GSLGK V +TVR+ T GVR+KTW
Sbjct: 352 CISIQTGCSNVFVHNVNCGPGHGISIGSLGKEGTKACVSNITVRDVAMHNTMTGVRIKTW 411
Query: 232 PDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
+G F +I +N V+ PI I+Q YC ++KC
Sbjct: 412 -QGGVGSVKGIIFSNIQLNQVQIPITINQFYCDHSKC 447
>gi|224055547|ref|XP_002298533.1| predicted protein [Populus trichocarpa]
gi|222845791|gb|EEE83338.1| predicted protein [Populus trichocarpa]
Length = 386
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 133/304 (43%), Gaps = 64/304 (21%)
Query: 21 DATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEG 79
+ +++ NV +FGA DG TDDS+AF +W A + T++VP G +L+ F G
Sbjct: 6 EGSSKAFNVLEFGAKGDGKTDDSEAFGATWAAACKVEA--STMIVPSGYVFLLHSVSFSG 63
Query: 80 P-CKASISFQLQG-----------------LLDLFSIDTSLSLAKGTFHGQGETAW---P 118
P C+A I FQL G ++ ++ KG GQG W P
Sbjct: 64 PGCEADIVFQLDGKIIAPTTPGAWKSGLLQWIEFTKLNGITIQGKGIIDGQGSVWWNNLP 123
Query: 119 LNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA---- 174
N + +RF +TGI +S H+ C ++++D K +
Sbjct: 124 TNNLEDSE------ALRFYGSTRVIVTGITIQNSPQTHLKFDDCTTVQVSDFKAASPENS 177
Query: 175 ------HADSSKDILV------------------SEVF-----CGPGQGISVGSLGKGIK 205
H ++S D+L+ S+V+ CGPG GIS+G LG+
Sbjct: 178 PNTDGIHLENSHDVLIYSSDLACGDDCVSIQTGCSQVYIHNVNCGPGHGISIGGLGRDNS 237
Query: 206 DEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPY 265
V +TVR+ T GVR+KTW G TF +I ++ V+ PI+IDQ YC
Sbjct: 238 KACVSNVTVRDVAMLNTLTGVRIKTWQGGS-GSVQGVTFSNIQVSGVKTPIMIDQFYCDR 296
Query: 266 NKCN 269
+KC
Sbjct: 297 SKCQ 300
>gi|359482331|ref|XP_002281827.2| PREDICTED: probable polygalacturonase At1g80170-like [Vitis
vinifera]
Length = 452
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 138/331 (41%), Gaps = 72/331 (21%)
Query: 2 LLAARFSLLVSFITSVRGIDA--------------TNRVLNVKDFGAVADGITDDSKAFD 47
L+ F LV F+ +V G + ++L V FGA DG+ DD+ AF
Sbjct: 23 LICTVFIFLVLFLINVEGFEPLIQLPHSPAARPRLETKILYVNQFGAKGDGVQDDTDAFR 82
Query: 48 TSWREAWNWDGIKGTVLVPP-GKYLVSFAEFEGPCKASISFQLQGL-------------- 92
+W+ A K ++++P K+LV F GPC+A ++ + G
Sbjct: 83 NAWKIACA-SITKASIVIPHDKKFLVRPISFGGPCRAKVTVTISGTIIAPKDPDVWHGLN 141
Query: 93 ----LDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSD--CQ-LPTPIRFNFLNDSTIT 145
L ++ G +G+G W C N+ C+ PT I F+ +
Sbjct: 142 PQKWLYFHGVNHLTVRGSGIINGRGHKWWS-QSCKINATNPCEHAPTAIIFHRCKKLRVR 200
Query: 146 GIKSVDSRYFHINILGCYNLKLNDLKITAHADS--------------------------- 178
I ++S+ HI + + ++ +K+ A A S
Sbjct: 201 DIALINSQRTHIAFTNSFRIVVSGIKMIAPASSPNTDGLHISSSSRVNIKDSIIRTGDDC 260
Query: 179 ------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWP 232
S I + + CGPG GISVGSLG G +V + V T NG+R+KTW
Sbjct: 261 ISIVGNSSIIRIKNIACGPGHGISVGSLGMGNSWAQVHDVIVDQAFLAHTKNGLRIKTWQ 320
Query: 233 DSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
G AS TF++++M NV +PI+IDQ YC
Sbjct: 321 GGR-GFASQITFQNVLMENVSHPIIIDQYYC 350
>gi|255548940|ref|XP_002515526.1| Polygalacturonase-2 precursor, putative [Ricinus communis]
gi|223545470|gb|EEF46975.1| Polygalacturonase-2 precursor, putative [Ricinus communis]
Length = 395
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 164/384 (42%), Gaps = 93/384 (24%)
Query: 9 LLVSFITSVRGID-ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPP 67
LL F S ++ A +LNV DFGA+ DG T+DS AF +W A + VP
Sbjct: 9 LLFCFAVSTIVVEGARPSILNVVDFGAIGDGQTNDSMAFLQAW-NALCEATTAPLLRVPA 67
Query: 68 GK-YLVSFAEFEGPCKAS-ISFQLQGLL------DLFSIDTS---LSLAK---------G 107
GK +L+ F GPC +S + Q+ G + D + TS LS ++ G
Sbjct: 68 GKTFLLQPVIFSGPCSSSRVRIQVLGSIVAPRSRDAWKNGTSESWLSFSQVLNLTISGTG 127
Query: 108 TFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 167
GQG W H S+ + F+ ++ + G+ ++S HI+I C + +
Sbjct: 128 QIDGQGSAWWT----HPRSN--HLKALHFSQCDNLILRGLTHINSPRNHISINSCIGVII 181
Query: 168 NDLKITAHADS---------------------------------SKDILVSEVFCGPGQG 194
+ L I A +S S I + V CGPG G
Sbjct: 182 SHLNIIAPKESPNTDGIDISRSSYVKIRDSNISTGDDCVAVNGNSSYIRIINVVCGPGHG 241
Query: 195 ISVGSLG-KGIKD--EEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNN 251
ISVGSLG KG+ D EEV VRNCTF T NGVR+KTW G A +F I +
Sbjct: 242 ISVGSLGAKGLTDTVEEV---HVRNCTFNRTQNGVRIKTWQGGQ-GFARKISFTQITLIA 297
Query: 252 VENPIVIDQLYC--PYNKCNIKPKDSMPNI--------------------EIGNRNLVYN 289
ENP++IDQ YC N N ++ N+ EIG N+V N
Sbjct: 298 SENPVIIDQYYCDGEQNCKNGTTAVAVSNVIYSDIKGTSAQKEAIRLDCSEIGCTNIVMN 357
Query: 290 GVNVKVEGP---ETTSLCSNVKPT 310
+ + P +T + C NV+ T
Sbjct: 358 RIYIAPSAPLVHQTEAYCQNVRGT 381
>gi|224115662|ref|XP_002317091.1| predicted protein [Populus trichocarpa]
gi|222860156|gb|EEE97703.1| predicted protein [Populus trichocarpa]
Length = 447
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 138/316 (43%), Gaps = 59/316 (18%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
++NV FGAV DGI+DD++AF +W A K LVP G+ YLV+ F+GPC+
Sbjct: 33 LVNVDSFGAVGDGISDDTQAFVKAWGTACAIP--KSVFLVPSGRRYLVNATRFKGPCEDK 90
Query: 85 ISFQLQGL------------------LDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNS 126
+ Q+ G LD ++ L G G G + W + C KN
Sbjct: 91 LIIQIDGTIVAPDEPKNWDPDLARLWLDFSKLNGVLFQGNGVIDGSG-SKWWASSCKKNK 149
Query: 127 D--CQ-LPTPIRFNFLNDSTITGIKSVDSRYFH--------------------------- 156
C+ PT + + + + G+ +S+ +
Sbjct: 150 SNPCRGAPTALTIDSSSAVKVKGLTIKNSQQMNFVISKSASVRISKVTVSSPGDSPNTDG 209
Query: 157 INILGCYNLKLNDLKITAHAD------SSKDILVSEVFCGPGQGISVGSLGKGIKDEEVV 210
I+I N+ L D KI D S I + ++CGPG G+S+GSLGK V
Sbjct: 210 IHITQSTNVVLQDCKIGTGDDCISIVNGSSAIKMKGIYCGPGHGVSIGSLGKDNSTGIVT 269
Query: 211 GLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNI 270
+ + T+NGVR+KTW + G FE++ M+NV+NPI+IDQ YC K
Sbjct: 270 KVVLDTALIRETTNGVRIKTWQGGN-GYVRGVRFENVRMDNVDNPIIIDQFYCDSPKSCQ 328
Query: 271 KPKDSMPNIEIGNRNL 286
++ EI RN+
Sbjct: 329 NQTSAVRISEIMYRNI 344
>gi|350537043|ref|NP_001234021.1| polygalacturonase-2 precursor [Solanum lycopersicum]
gi|129939|sp|P05117.1|PGLR_SOLLC RecName: Full=Polygalacturonase-2; Short=PG; AltName: Full=PG-2A;
AltName: Full=PG-2B; AltName: Full=Pectinase; Flags:
Precursor
gi|19292|emb|CAA28254.1| unnamed protein product [Solanum lycopersicum]
gi|19298|emb|CAA29148.1| unnamed protein product [Solanum lycopersicum]
gi|170473|gb|AAA34178.1| polygalacturonase [Solanum lycopersicum]
gi|295813|emb|CAA32235.1| polygalacturonase [Solanum lycopersicum]
Length = 457
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 142/317 (44%), Gaps = 58/317 (18%)
Query: 3 LAARFSLLVSFITSVRGIDATNR----VLNVKDFGAVADGITDDSKAFDTSWREAWNWDG 58
A S L I S ID ++ V+NV FGA DG T D+ AF+ +W EA +
Sbjct: 48 FQAYLSYLSKNIESNNNIDKVDKNGIKVINVLSFGAKGDGKTYDNIAFEQAWNEACS-SR 106
Query: 59 IKGTVLVPPGK-YLVSFAEFEGPCKASISFQLQGLLDLFS-----IDTSLSLAKGTFHG- 111
+VP K YL+ F GPC++SIS ++ G L+ S D L +A +
Sbjct: 107 TPVQFVVPKNKNYLLKQITFSGPCRSSISVKIFGSLEASSKISDYKDRRLWIAFDSVQNL 166
Query: 112 ----------QGETAWPLN-QCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINI 159
G+ WP + + +K+ C+ PT + F + + +KS +++ HI
Sbjct: 167 VVGGGGTINGNGQVWWPSSCKINKSLPCRDAPTALTFWNCKNLKVNNLKSKNAQQIHIKF 226
Query: 160 LGCYNLKLNDLKITAHADS---------------------------------SKDILVSE 186
C N+ ++L I A A S S+++ +
Sbjct: 227 ESCTNVVASNLMINASAKSPNTDGVHVSNTQYIQISDTIIGTGDDCISIVSGSQNVQATN 286
Query: 187 VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFED 246
+ CGPG GIS+GSLG G + V +TV NGVR+KTW G ASN F +
Sbjct: 287 ITCGPGHGISIGSLGSGNSEAYVSNVTVNEAKIIGAENGVRIKTWQGGS-GQASNIKFLN 345
Query: 247 IVMNNVENPIVIDQLYC 263
+ M +V+ PI+IDQ YC
Sbjct: 346 VEMQDVKYPIIIDQNYC 362
>gi|297853574|ref|XP_002894668.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297340510|gb|EFH70927.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 434
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 125/304 (41%), Gaps = 62/304 (20%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKY--LVSFAEFEGPCKA 83
V +V FGA+ D TDD+ AF +W A G K +L+ P + LV F GPC+
Sbjct: 47 VFDVTSFGAIGDCATDDTSAFKMAWDVACMSTGSKSALLLVPYTFCFLVKPTTFNGPCRT 106
Query: 84 SISFQLQGLL-----------------DLFSIDTSLSL-AKGTFHGQGETAWPL------ 119
+ Q+ G + +F LS+ G +G+G+ W L
Sbjct: 107 QLVLQIDGFILSPDGPGSWPSNYQRQWMMFYRVNGLSIQGSGVINGRGQKWWNLPCKPHK 166
Query: 120 --NQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD 177
N + C P IR + I G+ ++S FH+ C ++ ++ + I A A
Sbjct: 167 GINGTTQPGPCDSPVTIRVFQSSKVRIQGLNFMNSAQFHVRFDNCSDVVVDSVTIKAPAS 226
Query: 178 SSK---------------------------------DILVSEVFCGPGQGISVGSLGKGI 204
S ++ + V CGP GIS+GSLG
Sbjct: 227 SPNTDGIHIENTHNVQIHNSVISNGDDCISIGGGCFNVDIQNVTCGPSHGISIGSLGLHN 286
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
V +TV N T + NGVR+KTW G S F +I+M NV NPI+IDQ YC
Sbjct: 287 SQAYVSNITVTNSTIWNSDNGVRIKTWQGGS-GSVSRIVFSNILMVNVRNPIMIDQYYCQ 345
Query: 265 YNKC 268
N C
Sbjct: 346 TNNC 349
>gi|302769504|ref|XP_002968171.1| hypothetical protein SELMODRAFT_89085 [Selaginella moellendorffii]
gi|300163815|gb|EFJ30425.1| hypothetical protein SELMODRAFT_89085 [Selaginella moellendorffii]
Length = 383
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 138/296 (46%), Gaps = 62/296 (20%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK--YLVSFAEFEGPCKA 83
V NV+ F A DGI +D++AF +W A ++ +V + P +L+ A F+GPCK+
Sbjct: 9 VFNVRQFNARGDGIQNDTQAFLDAWNAACL---VEDSVFLIPQSFTFLIWPASFKGPCKS 65
Query: 84 SISFQLQGLL------DLFSID-----------TSLSLAK-GTFHGQGETAWPLNQCHKN 125
+++ Q+ G + D + TS S+ GT G+G+T W ++ H
Sbjct: 66 NMTMQIDGTIVAPGSPDQYEPGQRNSWISIVKLTSFSITGIGTIDGRGQTWWNISCKHNP 125
Query: 126 S----DCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKI--------- 172
S D PT + ++GI+ +S+ ++ + C+++ + ++I
Sbjct: 126 SPGCNDEDAPTALWVFGSTGLNMSGIRIQNSQQMNVAFVSCHDVIVAKIRIENPQNSPNT 185
Query: 173 ------------TAHA-------------DSSKDILVSEVFCGPGQGISVGSLGKGIKDE 207
HA S ++++ + CGPG GIS+GSLGKG
Sbjct: 186 DGIHIESSTNVTVEHAAIGTGSDDCVSIGSGSSNVVIRDCECGPGHGISIGSLGKGESAA 245
Query: 208 EVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
V + V T T NG+R+KTW G ASN FE++ M+ V NPI+IDQ YC
Sbjct: 246 YVSSVLVHRVQITGTMNGLRIKTWQGGR-GSASNIRFENVSMSGVANPIIIDQNYC 300
>gi|297841803|ref|XP_002888783.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297334624|gb|EFH65042.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 465
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 131/293 (44%), Gaps = 59/293 (20%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
++NV FGA DG++DD++AF ++W A + +LVP G+ YLV+ +F+GPC+
Sbjct: 63 LVNVDSFGAAGDGVSDDTQAFISAWTMACS--APNSVLLVPQGRSYLVNATKFDGPCQEK 120
Query: 85 ISFQLQGL------------------LDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNS 126
+ Q+ G L + + G G G T W C KN
Sbjct: 121 LIIQIDGTIVAPDEPSQWDPKFQRVWLQFSKLQGVVFQGNGVIDGSG-TKWWAASCKKNK 179
Query: 127 D---CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----- 178
PT + ++ + + +S+ H+ I ++++ + +T+ DS
Sbjct: 180 SNPCVGAPTALTIYSSSNVYVRDLTIRNSQQMHLIIARSNTVRISRVMVTSPGDSPNTDG 239
Query: 179 -----SKDILVSE-----------------------VFCGPGQGISVGSLGKGIKDEEVV 210
S D++V + ++CGPG GIS+GSLG+G V
Sbjct: 240 IHITASTDVVVQDSKISTGDDCVSIVNGSAKIKMKRIYCGPGHGISIGSLGQGHSTGTVT 299
Query: 211 GLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
+ + T+NG+R+KTW + G FE++VM +V NPI+IDQ YC
Sbjct: 300 AVVLDTAFLKNTTNGLRIKTWQGGN-GYVKGVRFENVVMQDVANPIIIDQFYC 351
>gi|297611569|ref|NP_001067620.2| Os11g0249400 [Oryza sativa Japonica Group]
gi|222615795|gb|EEE51927.1| hypothetical protein OsJ_33540 [Oryza sativa Japonica Group]
gi|255679960|dbj|BAF27983.2| Os11g0249400 [Oryza sativa Japonica Group]
Length = 419
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 128/296 (43%), Gaps = 56/296 (18%)
Query: 68 GKYLVSFAEFEGPCKA-SISFQLQG-------------LLDLFSIDTSLSLAKGTFHGQG 113
G YLVS A F GPC++ +++ + G L +F +S+A GT G+G
Sbjct: 77 GVYLVSRARFAGPCRSGAVAVNMTGATVVAPVPYAGVQLWIVFQDVDGVSVAGGTLDGRG 136
Query: 114 ETAWPLNQCHKNSDCQLPT-PIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKI 172
W + + DC T + + + G+ S DS HI + + + D +
Sbjct: 137 RALWACRRARR-PDCPPATRSLTIYRSRNVAVRGLTSRDSAGIHITVQASAGVAIVDTVV 195
Query: 173 TAHADS---------------------------------SKDILVSEVFCGPGQGISVGS 199
+A S S D+L+ V CGPG GIS+GS
Sbjct: 196 SAPGRSPNTDGIHIKQSTGVTVRNAVIGTGDDCVSMVEGSSDVLIEAVTCGPGHGISIGS 255
Query: 200 LGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVID 259
LG + V +TV+ T+NG+R+KTW ++ G + +F +VM NV NPI++D
Sbjct: 256 LGDTPEQVAVRNITVKGAALAGTTNGLRIKTWAKANAGAVAGVSFSGVVMRNVSNPIIVD 315
Query: 260 QLYCPYNKCNIKPKDSMPNIEIGNRNLVYNGVN-VKVEGPETTSL-----CSNVKP 309
Q YCP N S ++G+ + +GV+ +EG T+ CS +P
Sbjct: 316 QNYCPGNASCPTEARSPETCDLGS-GIEISGVSYTDIEGTSATATAVRFDCSPSRP 370
>gi|125557642|gb|EAZ03178.1| hypothetical protein OsI_25331 [Oryza sativa Indica Group]
Length = 415
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 139/300 (46%), Gaps = 56/300 (18%)
Query: 18 RGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAE 76
R +++ V +V+ GA DG DD+KA +W A + VL+P GK YL
Sbjct: 44 RSLESKKVVFDVRKHGAYGDGQHDDTKALAKAWAAACS-SLQPSIVLIPKGKRYLTKHIT 102
Query: 77 FEGPCKASISFQLQGLL-----------------DLFSIDTSLSLAKGTFHGQGETAWPL 119
GPCK+SI+F ++G L +F+ + L++A G + W
Sbjct: 103 LSGPCKSSITFMIEGTLVAPPKRSDWSKETIRHWIMFNGVSGLTVAGGGTVDENGKIWWQ 162
Query: 120 NQCHKNSD---CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA-- 174
N C N+ + PT + F ++ + +K ++S+ H+++ C +++++ L ITA
Sbjct: 163 NSCKTNAKLPCTEAPTALTFYSCSNLKVENLKLLNSQQIHMSVEDCTDVRISSLTITAPG 222
Query: 175 --------HADSSKDILVS-----------------------EVFCGPGQGISVGSLGKG 203
H SK++ V+ + CGPG GIS+GSLG
Sbjct: 223 TSPNTDGIHITRSKNVQVAGCIIKTGDDCMSIEDGTENLHVKNMVCGPGHGISIGSLGDH 282
Query: 204 IKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
+ V +TV T+NG R+KTW G A N F++++M NV NPI+IDQ YC
Sbjct: 283 NSEAHVNNVTVDPVRLYGTTNGARIKTWQGG-WGYAKNIVFQNMIMENVWNPIIIDQNYC 341
>gi|224092464|ref|XP_002309621.1| predicted protein [Populus trichocarpa]
gi|222855597|gb|EEE93144.1| predicted protein [Populus trichocarpa]
Length = 342
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 138/321 (42%), Gaps = 69/321 (21%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKA 83
++ NV FGAV DG TDDS AF +W G T+++PPG+ + + +F+GPCK+
Sbjct: 1 KLFNVLSFGAVGDGKTDDSPAFTKAWGALCGASGGTPTLVIPPGRAFSLKPVKFDGPCKS 60
Query: 84 -SISFQLQG-----------------LLDLFSIDTSLSL-AKGTFHGQGETAWPLNQCHK 124
S+ Q+ G FS L L G G+G W
Sbjct: 61 NSVHIQVAGNIVAPSTVAGWGGCGILFWLCFSNVNGLVLDGSGHIDGRGSQWW------- 113
Query: 125 NSDCQLPTPIRFNFLNDSTITGIKS-VDSRYFHINILGCYNLKLNDLKITAHADSS---- 179
+ P P N++ + V+S H+N+ C + ++ LKITA +S
Sbjct: 114 -NHVMYPFPALLFNNNNNLKLSGLNVVNSPRSHVNLNDCKGVSISGLKITAPGNSPNTDG 172
Query: 180 -----------------------------KDILVSEVFCGPGQGISVGSLGKGIKDEEVV 210
+I ++ + CGPG GIS+GSLG+ E+V
Sbjct: 173 IDVSSSSHVSIVDSTIGTGDDCIAIKGGCSNINITGINCGPGHGISIGSLGENGATEQVE 232
Query: 211 GLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNI 270
+ VRNC FT T NG R+KT P G TFE I +N +PI+IDQ YC
Sbjct: 233 EVHVRNCNFTGTENGARIKTVPGGS-GYVRRITFEQITLNAAGSPIIIDQHYCD------ 285
Query: 271 KPKDSMPNIEIGNRNLVYNGV 291
K+ P+ + ++ + GV
Sbjct: 286 GKKEGCPDQAVAVSDVTFTGV 306
>gi|15223166|ref|NP_177207.1| pectin lyase-like protein [Arabidopsis thaliana]
gi|12325038|gb|AAG52465.1|AC010796_4 putative polygalacturonase; 18642-16492 [Arabidopsis thaliana]
gi|332196950|gb|AEE35071.1| pectin lyase-like protein [Arabidopsis thaliana]
Length = 468
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 130/293 (44%), Gaps = 59/293 (20%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
++NV F A DG++DD++AF +W A + +LVP G+ YLV+ +F+GPC+
Sbjct: 66 LVNVDSFNASGDGVSDDTQAFIRAWTMACS--APNSVLLVPQGRSYLVNATKFDGPCQEK 123
Query: 85 ISFQLQGL------------------LDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNS 126
+ Q+ G L + + G G G T W C KN
Sbjct: 124 LIIQIDGTIIAPDEPSQWDPKFPRNWLQFSKLQGVVFQGNGVIDGSG-TKWWAASCKKNK 182
Query: 127 D---CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----- 178
PT + ++ + G+ +S+ H+ I ++++ + +T+ DS
Sbjct: 183 SNPCVGAPTALTIYSSSNVYVRGLTIRNSQQMHLIIQRSTTVRISRVMVTSPGDSPNTDG 242
Query: 179 -----SKDILVSE-----------------------VFCGPGQGISVGSLGKGIKDEEVV 210
S D++V + ++CGPG GIS+GSLG+G V
Sbjct: 243 IHITASTDVVVQDSKISTGDDCVSIVNGSAKIKMKRIYCGPGHGISIGSLGQGHSKGTVT 302
Query: 211 GLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
+ + T+NG+R+KTW + G FE++VM +V NPI+IDQ YC
Sbjct: 303 AVVLETAFLKNTTNGLRIKTWQGGN-GYVKGVRFENVVMQDVANPIIIDQFYC 354
>gi|224093210|ref|XP_002334853.1| predicted protein [Populus trichocarpa]
gi|222875228|gb|EEF12359.1| predicted protein [Populus trichocarpa]
Length = 294
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 107/206 (51%), Gaps = 33/206 (16%)
Query: 95 LFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRY 154
+F ++L+ GT GQG W K + + T + F+ + ITG+ S++S+
Sbjct: 12 IFEHVNGVTLSGGTLDGQGAGLWSCKNSGKGNCPRGATSLEFSNSKNIAITGLASLNSQM 71
Query: 155 FHINILGCYNLKLNDLKITAHADS---------------------------------SKD 181
FHI I GC N+KL +K++A +S + +
Sbjct: 72 FHIVINGCQNVKLQGVKVSADGNSPNTDGIHVQLSTAVTILNSRIGTGDDCISIGPGTSN 131
Query: 182 ILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASN 241
+ + V CGPG GIS+GSLGK ++ V +TV+ TFT T NG+R+KTW G A+N
Sbjct: 132 LWIENVACGPGHGISIGSLGKESQEAGVRDVTVKTTTFTGTENGLRIKTWGRPSNGFATN 191
Query: 242 FTFEDIVMNNVENPIVIDQLYCPYNK 267
F+ +VMNNV+NPI+IDQ YCP K
Sbjct: 192 ILFQHVVMNNVKNPILIDQNYCPGKK 217
>gi|297814139|ref|XP_002874953.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297320790|gb|EFH51212.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 480
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 152/351 (43%), Gaps = 74/351 (21%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREA-WNWDGIKGTV-LVPPG-KYLVSFAEFEGPCK 82
V NVK +GAV DG+TDD+++F T+W A N+ +V LVP G +++ F GPC+
Sbjct: 76 VYNVKKYGAVGDGVTDDTESFKTAWDSACGNYKNNTASVLLVPYGFTFMIRSTIFTGPCR 135
Query: 83 ASISFQLQGL-------------------LDLFSIDTSLSLAKGTFHGQGETAWPL---- 119
+ FQ+ G L + I+ G G+G+ W L
Sbjct: 136 SYQYFQVDGTIVPRDGPKSWPSSLDKRQWLVFYRINGMALKGVGVIDGRGQNWWDLPCKP 195
Query: 120 -----NQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA 174
N+ C+ P +RF ++ T+ G+ +S H+ + GC+ + +N ++I +
Sbjct: 196 HRQNVNKTKLAGPCESPAALRFFMSSNVTVKGLSIKNSPQVHLKLDGCHVVHINSIRIIS 255
Query: 175 ----------HADSSK-----------------------DILVSEVFCGP-GQGISVGSL 200
H ++SK DI + + CGP G GIS+GSL
Sbjct: 256 PSSSPNTDGIHIENSKSVEIYNSVISNGDDCVSIGPGSYDIDIRNLTCGPGGHGISIGSL 315
Query: 201 GKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQ 260
G+ V +TVR+ + NGVR+KTW G S TF +I ++ V NPI+IDQ
Sbjct: 316 GEKSSHACVSNVTVRDSFIKFSENGVRIKTWQGGS-GSVSGVTFNNIHVDTVRNPIIIDQ 374
Query: 261 LYCPYNKCNIKPKDSMPNIEIGNRNLVYNGVN--VKVEGPETTSLCSNVKP 309
YC C K N ++VY + + P CSN P
Sbjct: 375 YYCTAKSCANKTSAVFVN------DIVYQSIKGTYDIRSPPMHFGCSNNVP 419
>gi|297827843|ref|XP_002881804.1| hypothetical protein ARALYDRAFT_483267 [Arabidopsis lyrata subsp.
lyrata]
gi|297327643|gb|EFH58063.1| hypothetical protein ARALYDRAFT_483267 [Arabidopsis lyrata subsp.
lyrata]
Length = 433
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 143/306 (46%), Gaps = 56/306 (18%)
Query: 17 VRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFA 75
VR T ++V D+GA DG TDD++AF +W++A + +G +LVP G Y +
Sbjct: 58 VRASLRTPTTVSVSDYGAKGDGKTDDTQAFVNAWKKACSSNGAV-NLLVPKGNTYFLKSI 116
Query: 76 EFEGPCKASISFQLQGLLD---------------LFSIDTSLSLAKGTFHGQGET--AWP 118
+ GPC + I+ Q+ G L +F SLS+ G W
Sbjct: 117 QLTGPCSSIITVQMFGTLSASQKRTDYKDISKWIMFDGVNSLSVDGGGTGVVDGNGETWW 176
Query: 119 LNQCHKNSD---CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH 175
N C +N + PT + F + ++ +++ I+I N++++++ +TA
Sbjct: 177 QNSCKRNKAKPCTKAPTALTFYNSKSLIVENLRVRNAQQIQISIEKSSNVQVSNVVVTAP 236
Query: 176 ADS---------------------------------SKDILVSEVFCGPGQGISVGSLGK 202
ADS S+++ ++++ CGPG GIS+GSLG
Sbjct: 237 ADSPNTDGIHITNTQNIRVSDSIIGTGDDCISIESGSQNVQINDITCGPGHGISIGSLGD 296
Query: 203 GIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLY 262
V G+TV + T NGVR+KT+ G ASN F++I M NV+NPI+IDQ Y
Sbjct: 297 DNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGS-GTASNIIFQNIQMENVKNPIIIDQDY 355
Query: 263 CPYNKC 268
C +KC
Sbjct: 356 CDKSKC 361
>gi|413935441|gb|AFW69992.1| hypothetical protein ZEAMMB73_828266 [Zea mays]
Length = 516
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 135/301 (44%), Gaps = 58/301 (19%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGP 80
A V+NV FGA DG+ DD++AF ++W+ A + D LVP G +Y V +F GP
Sbjct: 97 ACRNVVNVDSFGAAGDGVADDTQAFASAWKTACSLD--NAVFLVPAGRRYKVGAIQFVGP 154
Query: 81 CK-ASISFQLQGLL--------------DLFSIDTSLSLAK----GTFHGQGETAWPLN- 120
CK + Q+QG + L+ + + L+ A+ G G G W +
Sbjct: 155 CKDRRMIIQIQGTVVAPEEPSEWDPRSPRLWLLFSGLAGARIQGGGVIDGSGSKWWASSC 214
Query: 121 QCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS- 178
+ ++++ C+ PT + + + G++ +++ H+ + +++ L+I A DS
Sbjct: 215 KINRSNPCRPAPTAVTIDSCRGVRVRGLRVQNAQQMHVTVSRSRGVRVAGLRIDAPEDSP 274
Query: 179 --------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKD 206
S + + ++ CGPG GIS+GSLGKG
Sbjct: 275 NTDGIHVAESTAVTIQSCRIGTGDDCISIVNGSFGVKMRDIDCGPGHGISIGSLGKGGAF 334
Query: 207 EEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYN 266
V + + + NGVR+KTW G F D+ ++ V++PIVIDQ YC
Sbjct: 335 AAVADVALDRARISRAQNGVRIKTW-QGGAGYVRGVRFADVAVDGVDHPIVIDQFYCDVT 393
Query: 267 K 267
+
Sbjct: 394 R 394
>gi|255564242|ref|XP_002523118.1| Exopolygalacturonase clone GBGE184 precursor, putative [Ricinus
communis]
gi|223537680|gb|EEF39303.1| Exopolygalacturonase clone GBGE184 precursor, putative [Ricinus
communis]
Length = 272
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 90/162 (55%), Gaps = 33/162 (20%)
Query: 134 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSSK------------- 180
I+F +++S + GI S++S++ H +I + +LKITA DS
Sbjct: 42 IKFQGVSNSVVNGINSINSKFLHFHITYSSSFTAYNLKITAPGDSPNTDGMHISETNGVN 101
Query: 181 --------------------DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFT 220
D SE+ CGPG GISVGSLGK +++V G+ V NCT +
Sbjct: 102 VSKSTIGTGDDCISIGAGVTDATFSEITCGPGHGISVGSLGKYQNEKDVNGIMVTNCTLS 161
Query: 221 CTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLY 262
T+NGVR+K+WP S AS+ TF+DI+M++VENPI+IDQ Y
Sbjct: 162 KTNNGVRIKSWPGSPPSAASSITFQDIIMDSVENPILIDQNY 203
>gi|359479951|ref|XP_002270821.2| PREDICTED: polygalacturonase At1g48100-like [Vitis vinifera]
Length = 469
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 142/347 (40%), Gaps = 73/347 (21%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKY--LVSFAEFEGPCKA 83
+ +V FGA DG++DDSKAF +W A +K + P K+ L+S +GPC+
Sbjct: 69 IFDVPSFGARGDGVSDDSKAFQVTWSAAC---AVKNATIKIPSKFRLLISPITLQGPCEP 125
Query: 84 SISFQLQGL------------------LDLFSIDTSLSLAKGTFHGQGETAWPL------ 119
+ Q+ G+ ++ ++ + +GT +GQG W +
Sbjct: 126 GLVLQIDGMIVAPGGPRMWLKPELLQWINFKNLHDFVIQGRGTINGQGSAWWWITPRILQ 185
Query: 120 ----NQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH 175
N+ + D PT +RF + TI I+ +S H+ C +K+ +L I++
Sbjct: 186 NQLTNRNSRYDDTMKPTAVRFYSSLNLTIRDIQIQNSPRCHLKFDNCAGVKVTNLSISSP 245
Query: 176 ADSS---------------------------------KDILVSEVFCGPGQGISVGSLGK 202
DS D+ + + CGPG GIS+G LGK
Sbjct: 246 GDSPNTDGIHLQNSQRVEVENSTISCGDDCISIQTGCSDVNIQNIKCGPGHGISIGGLGK 305
Query: 203 GIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLY 262
V + V+N T G+R+KTW +G + F DI ++NV+ PI+IDQ Y
Sbjct: 306 DGTLACVSNIVVQNSIMVDTLYGIRIKTW-QGGVGSVKSVIFLDIEVSNVKVPIMIDQFY 364
Query: 263 CPYNKCNIKPKDSMPNIEIGNRNLVYNGVNVKVEGPETTSLCSNVKP 309
C C K + N+ YN +N CS+ P
Sbjct: 365 CEGGTCRNKTD------AVSLTNITYNQINGTYATQAIHLACSDSIP 405
>gi|356511674|ref|XP_003524548.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase At1g48100-like
[Glycine max]
Length = 441
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 139/337 (41%), Gaps = 74/337 (21%)
Query: 1 LLLAARFSLLVSFITSVRGID------ATNRVLNVKDFGAVADGITDDSKAFDTSWREAW 54
L++ FS+ S T+ R A NV D+GA DG DD+KAF+ +W A
Sbjct: 14 LVIGIAFSVWSSSCTAARVSHWRKLKAAYATTFNVLDYGAKGDGHADDTKAFEDAWAAAC 73
Query: 55 NWDGIKGTVLVPPGK--YLVSFAEFEGP-CKASISFQLQG-----------------LLD 94
++G+ +V P +LV F GP C+ +I FQL G L+
Sbjct: 74 K---VEGSTMVVPSDSVFLVKPISFSGPNCEPNIVFQLDGKIVAPTSSEAWGSGTLQXLE 130
Query: 95 LFSIDTSLSLAKGTFHGQGETAWPLNQCHK------NSDCQLPT--PIRFNFLNDSTITG 146
++ KG GQG W + + S +LP+ P F +TG
Sbjct: 131 FSKLNKITIKGKGVIDGQGSVWWNDSPTYNPTKVMVESSGRLPSTRPTALRFYGSDXVTG 190
Query: 147 IKSVDSRYFHINILGCYNLKLNDLKITAHADSSK-------------------------- 180
I +S+ H+ C ++++ D+ +++ DS K
Sbjct: 191 ITIQNSQQTHLKFDSCTHVQVYDINVSSPGDSPKTDGIHLQNSQGVVIYSSTLASGNDNT 250
Query: 181 ----------DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKT 230
DI V V CGPG GIS+GSLGK V +TV++ T T GVR+ T
Sbjct: 251 MGILFAMILSDIYVHNVNCGPGHGISIGSLGKENTKACVRNVTVQDVTIQNTLTGVRIXT 310
Query: 231 WPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
W G N F + ++ V+ PI+IDQ YC K
Sbjct: 311 WQGGS-GSVQNIMFSHVQVSGVKTPILIDQYYCEGGK 346
>gi|449434933|ref|XP_004135250.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
Length = 530
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 137/328 (41%), Gaps = 88/328 (26%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKY--LVSFAEFEGP-CK 82
+ NV DFGA DG TDD+KAF +W + + + + P KY LV F GP C+
Sbjct: 113 MFNVLDFGAKGDGKTDDTKAFQDTWTASCK---VAASTFIVPSKYVFLVGPISFSGPYCQ 169
Query: 83 ASISFQL--------------QGLLDLFSIDTSLSL---AKGTFHGQGETAW-------- 117
I FQL +GLL + L G G+G W
Sbjct: 170 PDIVFQLDGTIIAPTDFKVWGKGLLQWLQFTKLMGLTIQGNGVIDGRGSVWWQEISPYDD 229
Query: 118 PLNQCHK-----NSDCQ------------------LPTPIRFNFLNDSTITGIKSVDSRY 154
P++ K NS Q PT +RF + T+TGI +S
Sbjct: 230 PIDDEFKLLIPLNSTVQEKPPPPARSELVGKMPRIKPTALRFYGSFNVTVTGITIQNSPQ 289
Query: 155 FHINILGCYNLKLNDLKITAHADS----------SKDILV------------------SE 186
H+ C + ++D +++ DS SKD+L+ S
Sbjct: 290 CHLKFDNCIGVLVHDFNVSSPGDSLNTDGIHLQNSKDVLIYSSTLSCGDDCISIQTGCSN 349
Query: 187 VF-----CGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASN 241
V+ CGPG GIS+GSLGK V +TVR+ T T NGVR+KTW +G
Sbjct: 350 VYIHNVNCGPGHGISIGSLGKDNTKACVSNITVRDVTMHNTMNGVRIKTW-QGGLGFVQG 408
Query: 242 FTFEDIVMNNVENPIVIDQLYCPYNKCN 269
F +I ++ V+ PIVIDQ YC KC+
Sbjct: 409 VLFSNIQVSEVKIPIVIDQFYCDKAKCS 436
>gi|224056805|ref|XP_002299032.1| predicted protein [Populus trichocarpa]
gi|222846290|gb|EEE83837.1| predicted protein [Populus trichocarpa]
Length = 469
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 131/294 (44%), Gaps = 61/294 (20%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK--YLVSFAEFEGPCKA 83
++NV FGAV DGI+DD++AF +W A +V + P + YLV+ F+GPC+
Sbjct: 62 LVNVDSFGAVGDGISDDTQAFVKAWETAC---ATPESVFLVPSEHHYLVNATRFKGPCED 118
Query: 84 SISFQLQGL------------------LDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKN 125
Q+ G L+ ++ L G G G + W + C KN
Sbjct: 119 RFVIQIDGTIVAPDEPKNWDPDHARQWLEFSKLNGVLFQGNGVIDGSG-SKWWASSCKKN 177
Query: 126 SD--CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---- 178
C+ PT + + + + G+ +S+ H I +++++ + ++A DS
Sbjct: 178 KTNPCRGAPTALTIDSSSSVKVKGLTIKNSQQMHFVISKSASVRISQVSVSAPGDSPNTD 237
Query: 179 -----------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEV 209
S I + ++CGPG G+S+GSLGK V
Sbjct: 238 GIHITQSTNVVLQDCKIGTGDDCISIVNGSSGIKMKRIYCGPGHGVSIGSLGKDNSTGIV 297
Query: 210 VGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
+ + + T+NGVR+KTW + G FE++ M+NV+NPI+IDQ YC
Sbjct: 298 AKVVLDTAFISETTNGVRIKTWQGGN-GYVRGVRFENVRMDNVDNPIIIDQFYC 350
>gi|157165828|gb|ABV25003.1| polygalacturonase 6 [Oncidium Gower Ramsey]
Length = 483
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 132/307 (42%), Gaps = 66/307 (21%)
Query: 24 NRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKY--LVSFAEFEGP- 80
N +LNV DFGA DG+TDD+KAF+ +W A ++ + + P Y LV F GP
Sbjct: 86 NSMLNVLDFGAKGDGVTDDTKAFEDAWMSACQ---VEASTMQIPSDYTFLVGPISFSGPY 142
Query: 81 CKASISFQLQGLL-----------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCH 123
C+ +I FQL G + + + GT G+G W + +
Sbjct: 143 CQPNIIFQLDGTIVAPTNSKIWSSGLLWWIEFTKLKGITIQGSGTIEGRGSVWWSQPEPN 202
Query: 124 KNSDCQ---------LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA 174
S + PT +RF + T+TGI +S H+ C + + ++ +T+
Sbjct: 203 DESISEELGSKMPSIKPTALRFYGSYNVTVTGITIQNSPQCHLKFDNCEAVHVYNMSVTS 262
Query: 175 ----------HADSSKDILVSE-----------------------VFCGPGQGISVGSLG 201
H +SKD+++ V CGPG GIS+G LG
Sbjct: 263 PGDILNTDGIHLQNSKDVVIHHCNLSCGDDCVSIQTGCNGVKIHNVNCGPGHGISIGGLG 322
Query: 202 KGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQL 261
+ V +TV++ T GVR+KTW G + F +I ++ V+ PIVIDQ
Sbjct: 323 RDNTKACVSNITVQDVNMYGTMTGVRIKTWQGGS-GSVQSIRFSNIRVSEVQTPIVIDQF 381
Query: 262 YCPYNKC 268
YC + C
Sbjct: 382 YCDRSSC 388
>gi|224138026|ref|XP_002322711.1| predicted protein [Populus trichocarpa]
gi|222867341|gb|EEF04472.1| predicted protein [Populus trichocarpa]
Length = 453
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 173/397 (43%), Gaps = 85/397 (21%)
Query: 2 LLAARFSLLVSFITSVRGIDATNRV-LNVKDFGA--VADGITDDSKAFDTSWREAWNW-D 57
L+ R +LV S G +T + + V+DFG TDD++ F+ +W+EA + +
Sbjct: 58 LIKLRSDVLVLQTFSKEGSKSTPVITVGVRDFGVKDDGGDDTDDTETFERAWKEACSSPE 117
Query: 58 GIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLLD----------------LF-SIDT 100
G ++VP Y + F+GPCK++I+ Q+ G ++ LF S+D
Sbjct: 118 G--AIIVVPEYTYRLKPIRFQGPCKSNIALQVHGTIEASCNQSDYKKDSRHWLLFDSVDN 175
Query: 101 SLSLAKGTFHGQGETAWPLNQCHKNSDC---QLPTPIRFNFLNDSTITGIKSVDSRYFH- 156
L GT G G+ W N C N + PT + F + + +K +++ H
Sbjct: 176 LLVEGGGTIDGNGKIWWE-NSCKVNKSLPCKEAPTAVTFFECQNLIVKDLKIQNAQQMHV 234
Query: 157 --------------------------INILGCYNLKLNDLKITAHAD------SSKDILV 184
I+I N+++ D I D S ++
Sbjct: 235 TFKKSNHVLVSNLTVISPEESPNTDGIHITKTQNIQITDSVIGTGDDCISIVSGSHNVQA 294
Query: 185 SEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTF 244
+ + CGPG GIS+GSLG + V G+TV+ + T+NGVR+KTW G SN F
Sbjct: 295 TGITCGPGHGISIGSLGAHDSKDHVSGVTVKGAKLSGTANGVRIKTWQGGS-GNVSNIKF 353
Query: 245 EDIVMNNVENPIVIDQLYCPYNKCNIKPKDSM-------PNI------EIGNR------- 284
++I MN V NPI+IDQ YC +K + K ++ NI E+ R
Sbjct: 354 QNIEMNKVTNPIIIDQNYCDQDKPCKQQKSALQVKNVMYKNIKGTSASEVAMRFDCSKAY 413
Query: 285 ---NLVYNGVNVKVEGPETT-SLCSNVKPTLFGKQIP 317
++ +N++ G T +LC+NVK G P
Sbjct: 414 PCQGILLQDINLERAGDRTAKALCNNVKLATLGVVYP 450
>gi|356567642|ref|XP_003552026.1| PREDICTED: polygalacturonase At1g48100-like [Glycine max]
Length = 538
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 134/333 (40%), Gaps = 86/333 (25%)
Query: 19 GIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEF 77
G ++ NV DFGA DG +DD+KAF +W EA + T+LVP + V F
Sbjct: 114 GGHSSATTFNVLDFGAKGDGKSDDTKAFQEAWAEACKIE--SSTMLVPADYAFFVGPISF 171
Query: 78 EGP-CKASISFQL--------------QGLLDLFSIDTSLSL---AKGTFHGQGETAW-- 117
GP CK SI FQL +GLL + + G G+G W
Sbjct: 172 SGPYCKPSIVFQLDGTIVAPTSPKAWGKGLLQWLEFSKLVGITIQGNGIIDGRGSVWWQD 231
Query: 118 ---------------PLNQCHKNSDCQLP--------------TPIRFNFLNDSTITGIK 148
PLN + LP T +RF + T+TGI
Sbjct: 232 NQYDDPIDDEEKLIVPLNHTVGSPSPPLPIQSEMGGKMPSVKPTALRFYGSFNPTVTGIT 291
Query: 149 SVDSRYFHINILGCYNLKLNDLKITAHADS----------SKDIL--------------- 183
+S H+ C + ++D+ I++ DS SKD+L
Sbjct: 292 IQNSPQCHLKFDNCNGVMVHDVTISSPGDSPNTDGIHLQNSKDVLIYSSSMACGDDCISI 351
Query: 184 --------VSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSH 235
V V CGPG GIS+GSLGK V +TVR+ T NGVR+KTW
Sbjct: 352 QTGCSNIYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNMHNTMNGVRIKTW-QGG 410
Query: 236 IGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
G F +I ++ VE PIVIDQ YC C
Sbjct: 411 SGSVQGVLFSNIQVSEVELPIVIDQFYCDKRTC 443
>gi|238011840|gb|ACR36955.1| unknown [Zea mays]
Length = 285
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 95/203 (46%), Gaps = 37/203 (18%)
Query: 98 IDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPTP-IRFNFLNDSTITGIKSVDSRYFH 156
+D + GT G+G W Q DC PT + D + G++SVDS FH
Sbjct: 1 MDGLVVAGGGTLDGRGRALWACRQ-RGQRDCPTPTSTLTIANSKDVVVAGLRSVDSELFH 59
Query: 157 INILGCYNLKLNDLKITAHADS---------------------------------SKDIL 183
+ +L C+ + + + + A ADS + +
Sbjct: 60 VVVLQCHGVTVRGVTVEAPADSPNTDGIHLHMSTHVSVYDARISTGDDCISIGPGNSHLW 119
Query: 184 VSEVFCGPGQGISVGSLGK--GIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASN 241
+ V CGPG GIS+GSLGK G + E V +TV+ FT T NG+R+KTW S G +
Sbjct: 120 IERVACGPGHGISIGSLGKQQGTEVEAVQNVTVKTTWFTGTMNGLRIKTWGGSKRGFVTG 179
Query: 242 FTFEDIVMNNVENPIVIDQLYCP 264
TF D M+ V+NPI+IDQ YCP
Sbjct: 180 VTFADSTMSGVDNPIIIDQNYCP 202
>gi|356526791|ref|XP_003532000.1| PREDICTED: polygalacturonase At1g48100 isoform 2 [Glycine max]
Length = 523
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/318 (31%), Positives = 131/318 (41%), Gaps = 71/318 (22%)
Query: 19 GIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEF 77
G + NV DFGA DG +DD+KAF +W EA + T+LVP + V F
Sbjct: 114 GGHSPTTTFNVLDFGAKGDGKSDDTKAFQEAWAEACKVE--SSTMLVPADYVFFVGPISF 171
Query: 78 EGP-CKASISFQL--------------QGLLDLFSIDTSLSL---AKGTFHGQGETAWPL 119
GP CK SI FQL +GLL + + G G+G W
Sbjct: 172 SGPYCKPSIVFQLDGTIVAPTSPNAWGKGLLQWLEFSKLVGITIQGNGIIDGRGSVWWQD 231
Query: 120 NQCHKNSDCQ----------------LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCY 163
N D + PT +RF + T+TGI +S H+ C
Sbjct: 232 NPYDDPIDDEEKLIIQSEMGGKMPSVKPTALRFYGSFNPTVTGITIQNSPQCHLKFDSCN 291
Query: 164 NLKLNDLKITAHADS----------SKDIL-----------------------VSEVFCG 190
+ ++++ I++ DS SKD+L V V CG
Sbjct: 292 GVMVHNVTISSPGDSPNTDGIHLQNSKDVLIYGSTMACGDDCISIQTGCSNVYVHNVNCG 351
Query: 191 PGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMN 250
PG GIS+GSLGK V +TVR+ T NGVR+KTW G F +I ++
Sbjct: 352 PGHGISIGSLGKDNTRACVSNITVRDVNMHNTMNGVRIKTW-QGGSGSVQGVLFSNIQVS 410
Query: 251 NVENPIVIDQLYCPYNKC 268
VE PIVIDQ YC C
Sbjct: 411 EVELPIVIDQFYCDKRTC 428
>gi|302826393|ref|XP_002994681.1| hypothetical protein SELMODRAFT_47881 [Selaginella moellendorffii]
gi|300137166|gb|EFJ04256.1| hypothetical protein SELMODRAFT_47881 [Selaginella moellendorffii]
Length = 338
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 130/294 (44%), Gaps = 67/294 (22%)
Query: 29 VKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP---PGKYL--VSFAEFEGPCKA 83
VK +GAV DG DD++AF ++ A G +LVP G YL +SF E
Sbjct: 1 VKSYGAVGDGKHDDAQAFLDAYNAACQ-AGDNAVILVPSTSAGYYLSPISFGEC-----T 54
Query: 84 SISFQLQGLLD------------------LFSIDTSLSLAKGTFHGQGETAWPLNQCHKN 125
S++ ++ G L LF+ T +L GTF+G G+ W + C K+
Sbjct: 55 SVTMKVDGTLHAIPRSAWLSKFSSEKSWLLFTKVTDFTLTGGTFNGNGQDWWA-HSCKKD 113
Query: 126 SDCQ---LPTPIRFNFLNDSTITGIKSVDSRYFHI------------------------- 157
+ PT +RF + + GI +S HI
Sbjct: 114 KSQRCTDAPTAVRFEDSKNIKVEGITITNSPQIHITFSDSQAIQATNVVINSPESSPNTD 173
Query: 158 --NILGCYNLKLNDLKITAHAD------SSKDILVSEVFCGPGQGISVGSLGKGIKDEEV 209
++ G N+ + D I+A D S +I V CGPG GIS+GSLGKG V
Sbjct: 174 GIHVSGSTNVVVRDGDISAGDDCVSIVSGSSNIQVLGGRCGPGHGISIGSLGKGGSYATV 233
Query: 210 VGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
+ V +NGVR+KTW G SN FE+I M+NV+NPI+IDQ YC
Sbjct: 234 SNVQVSGVKIDAATNGVRIKTWQGGK-GYVSNVIFENISMDNVKNPIIIDQNYC 286
>gi|359491344|ref|XP_002267182.2| PREDICTED: polygalacturonase-like [Vitis vinifera]
Length = 771
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 148/343 (43%), Gaps = 77/343 (22%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP-PGKYLVSFAEFEGPCKA 83
NV D+GA+ +G TDDS+AF +W + T LVP ++L++ FEG C++
Sbjct: 24 HTFNVMDYGAIGNGRTDDSEAFMKAWSDVCKASA-SPTFLVPGDRRFLINPVVFEGRCRS 82
Query: 84 S-ISFQLQGLLDLFS--------------------IDTSLSLAKGTFHGQGETAWPLNQC 122
I F++ G + S +D + GT G E W +
Sbjct: 83 KKIKFKVDGTITAPSEPSKWKCINKQCHSWISFKHVDGLVISGSGTIDGNAEKWWKQGRV 142
Query: 123 HKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---- 178
T + N+ + + D+ + H+ C +K++ + I A DS
Sbjct: 143 ---------TALVVARSNNVQLHDLSFKDNPHMHVVFHHCDGVKISHISIDAPEDSPNTD 193
Query: 179 -----------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEV 209
S I + + CGPG GIS+GSLGK E V
Sbjct: 194 GIHLKETASVIIEHCTIGTGDDCISLVDGSTHIDMRHIKCGPGHGISIGSLGKFGLSETV 253
Query: 210 VGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCN 269
+ V++ FT T+NGVR+KTW G A N FE I ++ E PI+IDQ YC + +C+
Sbjct: 254 EYIHVKDAQFTGTTNGVRIKTWQGGR-GHARNMIFEKIRSSDSEYPIIIDQFYCDHTECH 312
Query: 270 IKPKDSMPNIEIGNRNLVYNGVNVKVEGPETTSL---CSNVKP 309
KP +EI RN+ Y ++VK + T++ CS+ P
Sbjct: 313 DKPN----AVEI--RNISY--IDVKGTSKKETAVKIACSDTVP 347
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 151/374 (40%), Gaps = 89/374 (23%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
V +V +GA+ +G TDDS AF +W + N +P K +L++ F+GPC+++
Sbjct: 397 VFDVTQYGAIGNGSTDDSPAFMLAWTDVCNSSASTPIFHIPGNKTFLLNPVFFQGPCRST 456
Query: 85 -ISFQLQGLLDLFS--------------------IDTSLSLAKGTFHGQGETAWPLNQCH 123
I FQ+ G++ S +D G G G+ W + +
Sbjct: 457 NIQFQIDGIITAESEPSNWKCTRNRCDKWIHFKRVDGLFINGSGIIDGNGKNWW--SSGY 514
Query: 124 KNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSS---- 179
N+D + P+ + N +TG+ ++ + H+ C + ++++ I A DS
Sbjct: 515 INADLR-PSALEVTSSNKVQLTGLSFRNNPHMHVVFDSCDMVHISNVSIDAPGDSPNTDG 573
Query: 180 -----------------------------KDILVSEVFCGPGQGISVGSLGKGIKDEEVV 210
+I + + CGPG GIS+GS+G+ E V
Sbjct: 574 IHLKESTHVNIEFCSIRTGDDCISIVDKCSNITIQNIECGPGHGISIGSMGQYGAYETVE 633
Query: 211 GLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNI 270
+ V + F + +GVR+KTW G A F+ I N + PI IDQ YCP+ KC+
Sbjct: 634 NIYVSDVQFKGSLSGVRIKTWQGGK-GHARKMVFKGITSLNTQYPIQIDQFYCPHAKCD- 691
Query: 271 KPKDSMPNIEIGN--------------------------RNLVYNGVNVKVEGPETTSLC 304
+ +EI + +N+ +N+ +G ++ C
Sbjct: 692 ---EQADAVEISDISYIDIKGTSMRKTAVKLACSESVPCKNIFMQDINLSYQGTNASAYC 748
Query: 305 SNVKPTLFGKQIPA 318
NV T G P+
Sbjct: 749 KNVNGTSQGIMEPS 762
>gi|242076792|ref|XP_002448332.1| hypothetical protein SORBIDRAFT_06g025345 [Sorghum bicolor]
gi|241939515|gb|EES12660.1| hypothetical protein SORBIDRAFT_06g025345 [Sorghum bicolor]
Length = 400
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 132/295 (44%), Gaps = 64/295 (21%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS-I 85
NV GA DG TDD+KAF+ +W A G ++VP + +LV F+GPC + +
Sbjct: 27 NVVAHGARGDGSTDDTKAFEAAWNAACGAKGPSAVMVVPAQRTFLVGPVSFQGPCASQRV 86
Query: 86 SFQLQGLL---------------DLF-----SIDTSLSLAKGTFHGQGETAWPLNQCHKN 125
+ Q+QG + +L+ +D G G G++ W + +CH
Sbjct: 87 TVQIQGTIMAPPSTAASAWRNGTNLYWLMFDRVDGLRVTGNGVLDGSGQSWW-VRRCH-- 143
Query: 126 SDCQLPTPIRFNFL-----NDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-- 178
SD L + + L N+ ++ S +S HI I+ + + L I A +S
Sbjct: 144 SDANLFVSVAWQALKLVSCNNLELSQFSSRNSPQMHIAIVESSGVNVWGLNIAAPGNSPN 203
Query: 179 -------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDE 207
S+ + V + CGPG G+S+GSLGK +
Sbjct: 204 TDGVHVERSHGVQITNSTIGTGDDCVSISSGSRFVTVDGIQCGPGHGVSIGSLGKNGEIA 263
Query: 208 EVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLY 262
V + V+N FT T NG R+KTW + G A + +F DI +NV++PI+IDQ Y
Sbjct: 264 AVEYIDVKNVYFTNTMNGARIKTWEGAQ-GYARSISFTDIEFDNVDHPIIIDQFY 317
>gi|157165818|gb|ABV24998.1| polygalacturonase 1 [Oncidium Gower Ramsey]
Length = 482
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 132/307 (42%), Gaps = 66/307 (21%)
Query: 24 NRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKY--LVSFAEFEGP- 80
N +LNV DFGA DG+TDD+KAF+ +W A ++ + + P Y LV F GP
Sbjct: 85 NSMLNVLDFGAKGDGVTDDTKAFEDAWMSACQ---VEASTMQIPSDYTFLVGPISFSGPY 141
Query: 81 CKASISFQLQG-----------------LLDLFSIDTSLSLAKGTFHGQGETAW------ 117
C+ +I FQL G ++ + GT G+G W
Sbjct: 142 CQPNIIFQLDGTIVAPTNSKIWSSGLLWWIEFTKLKGITIQGNGTIEGRGSVWWSQPEPN 201
Query: 118 --PLNQ-CHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA 174
P+++ K PT +RF + T+TGI +S H+ C + + ++ +T+
Sbjct: 202 DEPISEELGKKMPSIKPTALRFYGSYNVTVTGITIQNSPQCHLKFDNCEAVHVYNMSVTS 261
Query: 175 HADS----------SKDILVSE-----------------------VFCGPGQGISVGSLG 201
DS SKD+ + V CGPG GIS+G LG
Sbjct: 262 PGDSLNTDGIHLQNSKDVAIHHCNLSCGDDCVSIQTGCNGVKIHNVNCGPGHGISIGGLG 321
Query: 202 KGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQL 261
+ V +TV++ T GVR+KTW G + F +I ++ V+ PIVIDQ
Sbjct: 322 RDNTKACVSNITVQDVNMYGTMTGVRIKTWQGGS-GSVQSIRFSNIRVSEVQTPIVIDQF 380
Query: 262 YCPYNKC 268
YC + C
Sbjct: 381 YCDRSSC 387
>gi|147810290|emb|CAN78059.1| hypothetical protein VITISV_006092 [Vitis vinifera]
Length = 422
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 137/319 (42%), Gaps = 76/319 (23%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPP--GKYLVSFAEFEGPCKA- 83
+NV DFGA DG+TDD++AF T+W E + + VLV P KY V F GPCK+
Sbjct: 91 VNVDDFGAKGDGVTDDTEAFKTAWEETCSSNT---AVLVVPQNKKYHVKPITFSGPCKSD 147
Query: 84 SISFQLQGLLD-----------------LFSIDTSLSLAKGTFHGQGETAWPLNQCHKNS 126
S+ ++ G + ++I +GT G G+ W N C N
Sbjct: 148 SVKLKILGTIKASEDPSDYAKDRSRWLLFYNIKNFQVEGQGTIDGNGKIWWK-NSCKIN- 205
Query: 127 DCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-------- 178
+ + F ++ + G+ D++ H++ N++ +++ +T+ +S
Sbjct: 206 ---ITQAVSFVQCDNLKVYGLNVQDAQQMHVSFEESMNVQASNIMVTSSEESPNTDGIHV 262
Query: 179 -------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLT 213
S +I +V CGPG GIS+GSLGKG + V +
Sbjct: 263 TRSENVQIIKTVIKTGDDCISIVNGSTNIEAIDVTCGPGHGISIGSLGKGKSEARVSNVM 322
Query: 214 VRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYN-KCNIKP 272
V T+NG G A N F+DI M NV NPI+IDQ YC CN +
Sbjct: 323 VNTAKLIGTTNG--------GGSGYAENIVFQDIKMENVSNPIIIDQNYCDQEIPCNEQ- 373
Query: 273 KDSMPNIEIGNRNLVYNGV 291
N + RN+VY +
Sbjct: 374 -----NSAVQIRNIVYKNI 387
>gi|157165822|gb|ABV25000.1| polygalacturonase 3 [Oncidium Gower Ramsey]
Length = 483
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 131/307 (42%), Gaps = 66/307 (21%)
Query: 24 NRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKY--LVSFAEFEGP- 80
N + NV DFGA DG+TDD+KAF+ +W A ++ + + P Y V F GP
Sbjct: 86 NSMFNVLDFGAKGDGVTDDTKAFEDAWMSACQ---VEASTMQIPSDYTFFVGPISFSGPY 142
Query: 81 CKASISFQLQG-----------------LLDLFSIDTSLSLAKGTFHGQGETAW------ 117
C+ +I FQL G ++ + GT G+G W
Sbjct: 143 CQPNIIFQLDGTIVAPTNSKIWSSGLLWWIEFTKLKGITIQGNGTIEGRGSVWWSQPEPN 202
Query: 118 --PLNQ-CHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA 174
P+++ K PT +RF + T+TGI +S H+ C + + ++ +T+
Sbjct: 203 DEPISEELGKKMPSIKPTALRFYGSYNVTVTGITIQNSPQCHLKFDNCEAVHVYNMSVTS 262
Query: 175 HADS----------SKDILVSE-----------------------VFCGPGQGISVGSLG 201
DS SKD+++ V CGPG GIS+G LG
Sbjct: 263 PGDSLNTDGIHLQNSKDVVIHHRNLSCGDDCVSIQTGCNGVKIHNVNCGPGHGISIGGLG 322
Query: 202 KGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQL 261
+ V +TVR+ T GVR+KTW G + F +I ++ V+ PIVIDQ
Sbjct: 323 RDNTKACVSNITVRDVNMYGTMTGVRIKTWQGGS-GSVQSIRFSNIRVSEVQTPIVIDQF 381
Query: 262 YCPYNKC 268
YC + C
Sbjct: 382 YCDRSSC 388
>gi|224284550|gb|ACN40008.1| unknown [Picea sitchensis]
Length = 440
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 147/348 (42%), Gaps = 61/348 (17%)
Query: 20 IDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFE 78
+D + V +V +GA +G++DDS+AF +W A LVP G YLV F
Sbjct: 51 LDPSAAVFSVDSYGAKGNGVSDDSQAFLAAWNAACT-SSSDSIFLVPHGNSYLVKPISFN 109
Query: 79 GPCK-ASISFQLQGLLDL-----------------FSIDTSLSL-AKGTFHGQGETAWPL 119
GPC S++ Q+ G + FS L++ G G GE W
Sbjct: 110 GPCNTGSLTAQISGRIVAPADPCNWNPEDRTIWLQFSKVQGLTIHGGGIIDGSGEKWWAG 169
Query: 120 NQCHKNSDCQLPTPIRFNFLNDSTITGIKSV---DSRYFHINILGCYNLKLNDLKITAHA 176
+ + L P F +N S+ ++ + +S+ FH+ I ++++ +L+I A
Sbjct: 170 SCSRDQNKVCLSVPFAF-VVNSSSNVHLRDLTFQNSQKFHVVISLSKHVEVENLQIVAPG 228
Query: 177 DS---------------------------------SKDILVSEVFCGPGQGISVGSLGKG 203
DS S I V+++ CGPG GIS+GSLGK
Sbjct: 229 DSPNTDGIHIFTSEHVMIRNCTIATGDDCVSIIAQSSHIQVNDIICGPGHGISIGSLGKY 288
Query: 204 IKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
+ V + V + + T NG+R+KTW G A F+ + M NV NPI+IDQ YC
Sbjct: 289 NATDTVSDVVVNRASLSGTQNGLRIKTWQGGS-GYAQGIIFQHVKMINVSNPIIIDQYYC 347
Query: 264 P-YNKCNIKPKDSMPNIEIGNRNLVYNGVNVKVEGPETTSL-CSNVKP 309
++CN + + N+ Y G+ E L CS P
Sbjct: 348 AGSSRCNQPAPCNNQTSAVQVNNVTYTGITGTSATQEAIKLACSATVP 395
>gi|4558558|gb|AAD22651.1|AC007138_15 putative polygalacturonidase [Arabidopsis thaliana]
gi|7268573|emb|CAB80682.1| putative polygalacturonidase [Arabidopsis thaliana]
Length = 452
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 144/342 (42%), Gaps = 72/342 (21%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAW--NWDGIKGTVLVPPG-KYLVSFAEFEGPCK 82
V +V+ +GAV +G+ DD+ +F T+W A N + + VP G +++ F GPC+
Sbjct: 64 VYDVRKYGAVGNGVADDTVSFKTAWDSACSNNKNNTASVLHVPYGFTFMIRSTIFTGPCR 123
Query: 83 ASISFQLQGL-------------------LDLFSIDTSLSLAKGTFHGQGETAWPLNQCH 123
+ FQ+ G L + I+ G G+G+ W L
Sbjct: 124 SYQYFQVDGTIVPRDGPKSWPSSLNKRQWLAFYRINGMALQGAGVIDGRGQNWWDL---- 179
Query: 124 KNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA--------- 174
C+ +RF ++ + G+ +S H+ + GC+ + +N L+I +
Sbjct: 180 ---PCKPHQALRFFMSSNVIVKGLSIKNSPQVHLKLDGCHVVHINSLRIISPPASPNTDG 236
Query: 175 -HADSSK-----------------------DILVSEVFCGP-GQGISVGSLGKGIKDEEV 209
H ++S DI + + CGP G GIS+GSLG+ V
Sbjct: 237 IHIENSNSVEIYNSVISNGDDCVSIGPGAYDIDIRNITCGPGGHGISIGSLGEKNSHACV 296
Query: 210 VGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCN 269
+TVR+ + NGVR+KTW G S TF++I ++ V NPI+IDQ YC C
Sbjct: 297 SNVTVRDSFIKFSENGVRIKTWQGGS-GSVSGVTFDNIHVDTVRNPIIIDQYYCTTKSCA 355
Query: 270 IKPKDSMPNIEIGNRNLVYNGVN--VKVEGPETTSLCSNVKP 309
K N ++VY + + P CSN P
Sbjct: 356 NKTSAVFVN------DIVYQSIKGTYDIRSPPMHFGCSNNVP 391
>gi|302773968|ref|XP_002970401.1| hypothetical protein SELMODRAFT_93668 [Selaginella moellendorffii]
gi|300161917|gb|EFJ28531.1| hypothetical protein SELMODRAFT_93668 [Selaginella moellendorffii]
Length = 383
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 137/296 (46%), Gaps = 62/296 (20%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK--YLVSFAEFEGPCKA 83
V NV+ F A DGI +D++AF +W A ++ +V + P +L+ A F+GPCK+
Sbjct: 9 VFNVRQFNARGDGIQNDTQAFLDAWDAACL---VEDSVFLIPQSFTFLIWPASFKGPCKS 65
Query: 84 SISFQLQGLL------DLFSID-----------TSLSLAK-GTFHGQGETAWPLNQCHKN 125
+++ Q+ G + D + TS S+ GT G+G+T W ++ H
Sbjct: 66 NMTMQIDGTIVAPGSPDQYEPGQRNSWISIVKLTSFSITGIGTIDGRGQTWWNISCKHNP 125
Query: 126 S----DCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKIT-------- 173
S D PT + ++GI+ +S+ ++ + C+++ + ++I
Sbjct: 126 SPGCNDEDAPTALWVFGSTGLNLSGIRIQNSQQMNVAFVSCHDVIVARIRIENPQNSPNT 185
Query: 174 -------------AHA-------------DSSKDILVSEVFCGPGQGISVGSLGKGIKDE 207
HA S ++++ + CGPG GIS+GSLGKG
Sbjct: 186 DGIHIESSMNVTIEHAAIGTGSDDCVSIGSGSSNVVIRDCECGPGHGISIGSLGKGESAA 245
Query: 208 EVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
V + V T NG+R+KTW G ASN FE++ M+ V NPI+IDQ YC
Sbjct: 246 YVSSVLVHRLQINGTMNGLRIKTWQGGR-GSASNIRFENVSMSGVANPIIIDQNYC 300
>gi|317106742|dbj|BAJ53238.1| JHL06P13.19 [Jatropha curcas]
Length = 443
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 126/294 (42%), Gaps = 56/294 (19%)
Query: 23 TNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGPC 81
+ RV V DFGA DG ++D+KAF +WR A + + +++P G +LV + GPC
Sbjct: 52 SKRVFFVGDFGAKGDGFSNDTKAFIDAWRMACSCPA-RTRIIIPAGFIFLVHPVDLAGPC 110
Query: 82 KASISFQLQGLLD-----------------LFSIDTSLSL-AKGTFHGQGETAWPLNQCH 123
K+ I+ + G + F L++ GT +G G W C
Sbjct: 111 KSRITLIISGTITAPKDPAHWKGLNPRKWLYFHGVNHLTIDGGGTINGMGR-GWWARSCK 169
Query: 124 KNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA-------- 174
N C+ PT I F+ + + + V + HI+ C + L + +
Sbjct: 170 INPPCRHAPTAITFHKCKNLKVRNLSVVHGQQMHISFTNCIRVMAFHLVVISPSFSPNTD 229
Query: 175 --HADSSKDILVSEVF-----------------------CGPGQGISVGSLGKGIKDEEV 209
H +S+ + V + CGPG GIS+GSLGK V
Sbjct: 230 GIHISASRGVEVRDSIVRTGDDCISIVSNSSRIKIKNFACGPGHGISIGSLGKYNSSSRV 289
Query: 210 VGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
+ V + T NGVR+KTW G A+ F+++ M NV NPI+IDQ YC
Sbjct: 290 YDIMVDGAFLSNTDNGVRIKTWQGGS-GNATEIRFQNVFMENVSNPIIIDQYYC 342
>gi|255576402|ref|XP_002529093.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223531444|gb|EEF33277.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 321
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 120/277 (43%), Gaps = 62/277 (22%)
Query: 7 FSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP 66
+++ F+TS AT + NV +GA DG TD ++AF +W++A + T+ VP
Sbjct: 12 LAIIFVFVTSSS--FATAAIYNVSSYGAKPDGTTDSTEAFIAAWKQACS-SLEPTTIYVP 68
Query: 67 PGKYLVSFAEFEGPCKA-SISFQLQGLLD---------------LFSIDTSLSLAKGTFH 110
G++L+ F G C+ +I ++ G+L LF +S G
Sbjct: 69 LGRFLLRNVAFRGKCRNNAIQIRIDGMLVAPSDYRVIGHSENWLLFENVDGVSFFGGVLD 128
Query: 111 GQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
QG W KN T +RF N+ I G+ S++S++
Sbjct: 129 AQGTGLWNCKATAKNCPSG-ATSLRFTNANNIEIKGLSSLNSQF---------------- 171
Query: 171 KITAHADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKT 230
+GSLGK + V +TV+ TFT T NGVR+K
Sbjct: 172 --------------------------IGSLGKEFHEPGVQNVTVKTVTFTGTENGVRIKA 205
Query: 231 WPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
W G A N +F++ +M NV NPIVIDQ YCP+ +
Sbjct: 206 WARPSTGFARNISFQNAIMKNVHNPIVIDQNYCPHKR 242
>gi|225425577|ref|XP_002266600.1| PREDICTED: polygalacturonase At1g48100 [Vitis vinifera]
gi|297739064|emb|CBI28553.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 137/328 (41%), Gaps = 87/328 (26%)
Query: 24 NRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKY--LVSFAEFEGP- 80
+ NV DFGA DG TDD+KAF ++W A ++ + +V P +Y LV F GP
Sbjct: 87 SETFNVLDFGAKGDGDTDDTKAFQSAWASACK---VEASTIVVPSEYVFLVGPISFSGPY 143
Query: 81 CKASISFQLQGLL-----------------DLFSIDTSLSLAKGTFHGQGETAW------ 117
C+A+I FQL G + + + G G+G W
Sbjct: 144 CEANIVFQLDGTIIAPTNAKAWGSGLLWWIEFTKLRGITIRGNGVIDGKGSVWWQDSPFD 203
Query: 118 -----------PLNQCHK-NSDCQL------------PTPIRFNFLNDSTITGIKSVDSR 153
PLN+ K NS + PT +RF + T+TGI +S
Sbjct: 204 DPVDDEAKLIIPLNRTAKENSPIPINSKLGSKMPSTKPTALRFYGSFNVTVTGITIQNSP 263
Query: 154 YFHINILGCYNLKLNDLKITAHADS----------SKDILV------------------S 185
H+ C + + ++ +++ DS SKD+L+ S
Sbjct: 264 QCHLKFDNCMGVSVYEMSVSSPGDSVNTDGIHLQNSKDVLIHATNLACGDDCVSIQTGCS 323
Query: 186 EVF-----CGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIAS 240
V+ CGPG GIS+G LG+ V +TVR+ T NGVR+KTW G
Sbjct: 324 NVYIHNVNCGPGHGISIGGLGRDGTKACVSNITVRDIIMHNTMNGVRIKTWQGGS-GSVQ 382
Query: 241 NFTFEDIVMNNVENPIVIDQLYCPYNKC 268
F +I ++ VE PIVIDQ YC KC
Sbjct: 383 GVLFSNIQVSEVELPIVIDQFYCDKGKC 410
>gi|357455211|ref|XP_003597886.1| Polygalacturonase [Medicago truncatula]
gi|355486934|gb|AES68137.1| Polygalacturonase [Medicago truncatula]
Length = 404
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 135/314 (42%), Gaps = 60/314 (19%)
Query: 7 FSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP 66
F+LL+ G+ T NV +GAV DG T+DS AF +W++ N +++P
Sbjct: 9 FTLLMILSMFKLGLSITT-TFNVLQYGAVGDGKTNDSPAFLKAWKDVCNSKSGTSRLIIP 67
Query: 67 PGK-YLVSFAEFEGPCKAS-ISFQLQGLLDL-----------------FSIDTSLSLA-K 106
K +L+ F GPCK++ I +L G + FS L ++ K
Sbjct: 68 AAKTFLLRPIAFRGPCKSNYIYIELSGNIIAPKTKSEYSGSPINTWIGFSFVNGLIISGK 127
Query: 107 GTFHGQGETAWPLNQCHKN----SDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGC 162
GT G+G W C N + C+ PT I N I G S++ HI + C
Sbjct: 128 GTVDGRGSMWWK-QPCIGNPPPGTSCRPPTAITLNRCYRFQIKGYTSINPARSHITLTSC 186
Query: 163 YNLKLNDLKITAHADS----------SKDILVSEVF-----------------------C 189
++++++ A +S S+DI V F C
Sbjct: 187 KKGIISNIRLIAPGESPNTDGIDISASRDIQVLNSFIATGDDCIAISAGSSVIKITAITC 246
Query: 190 GPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVM 249
GPG GIS+GSLG + V + V+NCT T T GVR+KT G A TFE+I
Sbjct: 247 GPGHGISIGSLGARGDTDIVEDVHVKNCTLTETLTGVRIKT-KQGGGGFARRITFENIKF 305
Query: 250 NNVENPIVIDQLYC 263
NPI IDQ YC
Sbjct: 306 VRAHNPIWIDQFYC 319
>gi|307135969|gb|ADN33828.1| polygalacturonase [Cucumis melo subsp. melo]
Length = 530
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 136/328 (41%), Gaps = 88/328 (26%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKY--LVSFAEFEGP-CK 82
+ NV DFGA DG TDD+KAF +W + + + + P KY LV F GP C+
Sbjct: 113 MFNVLDFGAKGDGKTDDTKAFQDTWTASCK---VAASTFIVPSKYVFLVGPISFSGPYCQ 169
Query: 83 ASISFQL--------------QGLLDLFSIDTSLSL---AKGTFHGQGETAW-------- 117
I FQL +GLL + L G G+G W
Sbjct: 170 PDIVFQLDGTIIAPTDFKVWGKGLLQWLQFTKLMGLTIQGNGVIDGRGSVWWQEISPYDD 229
Query: 118 PLNQCHK-----NSDCQ------------------LPTPIRFNFLNDSTITGIKSVDSRY 154
P++ K NS Q PT +RF + T+TGI +S
Sbjct: 230 PIDDEFKLLIPLNSTVQEKPPAPARSELVGKMPRIKPTALRFYGSFNVTVTGITIQNSPQ 289
Query: 155 FHINILGCYNLKLNDLKITAHADS----------SKDILV------------------SE 186
H+ C + ++D +++ DS SKD+L+ S
Sbjct: 290 CHLKFDNCIGVLVHDFNVSSPGDSLNTDGIHLQNSKDVLIYSSTLSCGDDCISIQTGCSN 349
Query: 187 VF-----CGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASN 241
V+ CGPG GIS+GSLGK V +TVR+ T NGVR+KTW +G
Sbjct: 350 VYIHNVNCGPGHGISIGSLGKDNTKACVSNITVRDVIMHNTMNGVRIKTW-QGGLGFVQG 408
Query: 242 FTFEDIVMNNVENPIVIDQLYCPYNKCN 269
F +I ++ V+ PIVIDQ YC KC+
Sbjct: 409 VLFSNIQVSEVKIPIVIDQFYCDKAKCS 436
>gi|449485383|ref|XP_004157151.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 400
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 140/319 (43%), Gaps = 65/319 (20%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK 60
+LLA LL+S ++R + N +L++ DFGA+ D S+A +W A +
Sbjct: 15 ILLA--LVLLISH--TIRRSHSAN-LLDILDFGAIRG--YDSSQAIRRAWAVACKSEE-S 66
Query: 61 GTVLVPPGKYLVSFAEFEGP-CK-ASISFQLQGLLD-------LFSIDTSLS-------- 103
V +P G++LV EF G C ISF + G L L ++++ LS
Sbjct: 67 TIVYIPKGRFLVQPMEFHGGGCHNEDISFHIDGALIGPPDYRILGNVESWLSFVEVNGVS 126
Query: 104 LAKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDST---ITGIKSVDSRYFHINIL 160
L G GE W K S P R DS I G+ S +S+ FHI I
Sbjct: 127 LTGGVLDANGEALWSC----KFSTTHCPVGARTLSFRDSKNIRIRGLVSRNSQLFHIVIN 182
Query: 161 GCYNLKLNDLKITAHADS---------------------------------SKDILVSEV 187
GC N+ + ++ + A ++S S ++ + +
Sbjct: 183 GCKNVLVEEVNVIAASNSPNTDGIHVETSTHVTIIDSIIQTGDDCISIGPGSYNLWIQRI 242
Query: 188 FCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDI 247
CGPG GIS+GSL + + V +TV N F T NG+R+K+W G F
Sbjct: 243 RCGPGHGISIGSLAHNMNEPGVGNITVANAIFYGTQNGLRIKSWARPSTGFVYGVQFLGA 302
Query: 248 VMNNVENPIVIDQLYCPYN 266
M+NV+NPI+IDQ YCP N
Sbjct: 303 TMHNVQNPILIDQHYCPNN 321
>gi|157165826|gb|ABV25002.1| polygalacturonase 5 [Oncidium Gower Ramsey]
Length = 484
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 131/304 (43%), Gaps = 64/304 (21%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGP-CKA 83
+ NV DFGA DG+TDD+KAF+ +W A + TV +P +L+ F GP C+
Sbjct: 89 MFNVLDFGAKGDGVTDDTKAFEDAWMSACQVEA--STVQIPSDYTFLIGPISFSGPYCQP 146
Query: 84 SISFQLQGLLDLFSIDTSLS-----------------LAKGTFHGQGETAWPLNQCHKNS 126
+I FQL G + +I S GT G+G W + + S
Sbjct: 147 NIIFQLDGTIVAPTISKIWSSGLLWWIEFTKLKGITIQGSGTIEGRGSVWWSQPEPNDES 206
Query: 127 DCQ---------LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD 177
+ PT +RF + T+TGI +S H+ C + + ++ +T+ D
Sbjct: 207 ISEELGSKMPSIKPTALRFYGSYNVTVTGITIQNSPQCHLKFDNCEAVHVYNMSVTSPGD 266
Query: 178 S----------SKDILVSE-----------------------VFCGPGQGISVGSLGKGI 204
S SKD+++ V CGPG GIS+G LG+
Sbjct: 267 SLNTDGIHLQNSKDVVIHHCNLSCGDDCVSIQTGCNGVKIHNVNCGPGHGISIGGLGRDN 326
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
V +TV++ T GVR+KTW G + F +I ++ V+ PIVIDQ YC
Sbjct: 327 TKACVSNITVQDVNMYGTMTGVRIKTWQGGS-GSVQSIRFSNIRVSEVQTPIVIDQFYCD 385
Query: 265 YNKC 268
+ C
Sbjct: 386 RSSC 389
>gi|242052853|ref|XP_002455572.1| hypothetical protein SORBIDRAFT_03g013310 [Sorghum bicolor]
gi|241927547|gb|EES00692.1| hypothetical protein SORBIDRAFT_03g013310 [Sorghum bicolor]
Length = 693
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 136/323 (42%), Gaps = 86/323 (26%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPP-GKYLVSFAEFEGPCKAS 84
V +V+ FGA + +D++AF +W+ A + + T+LVP G + +S F GPCK++
Sbjct: 262 VFDVRAFGASGNASGNDTRAFRAAWKAACSSNTTTATLLVPSDGVFTISSTIFAGPCKSA 321
Query: 85 ISFQLQGLLD------------------LFSIDTSLSLA-KGTFHGQGETAWPLN-QCHK 124
++FQ+ G+L +F ++LA +GT G GE W L + H+
Sbjct: 322 LTFQIDGVLMPPDGPASWPASDSRKQWIVFYKADGMTLAGEGTIEGNGEEWWDLPCKPHR 381
Query: 125 NSD-CQLPTP------------------------------IRFNFLNDSTITGIKSVDSR 153
+ LP P +RF ND + G++ +S
Sbjct: 382 GPNGSTLPGPCDSPAVSKLADHMDFTLFFVHVLGLTLFLLVRFFSSNDVAVRGLRIENSP 441
Query: 154 YFHINILGCYNLKLNDLKITAHADSS---------------------------------K 180
FH+ C ++++ L +++ A S
Sbjct: 442 QFHLKFDACDRVRVDGLFVSSPASSPNTDGVHVENTTSVQILNSRIYNGDDCVSIGAGCS 501
Query: 181 DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIAS 240
D+ + + CG G GIS+GSLG V +TVRN + NGVR+KTW G S
Sbjct: 502 DVHIENITCGHGHGISIGSLGVHNTRACVSNVTVRNARIVDSDNGVRIKTW-QGGTGAVS 560
Query: 241 NFTFEDIVMNNVENPIVIDQLYC 263
F + M NV+N IVIDQ YC
Sbjct: 561 AVEFAGVQMQNVKNCIVIDQYYC 583
>gi|357455167|ref|XP_003597864.1| hypothetical protein MTR_2g103410 [Medicago truncatula]
gi|87162606|gb|ABD28401.1| Glycoside hydrolase, family 28 [Medicago truncatula]
gi|355486912|gb|AES68115.1| hypothetical protein MTR_2g103410 [Medicago truncatula]
Length = 451
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 133/316 (42%), Gaps = 61/316 (19%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
L++ DFGA DG +D++AF W A + G V +LV+ + GPC++ I+
Sbjct: 59 LSIADFGARGDGFHNDTQAFLKVWEIACSLSGFINIVFPYQKTFLVTPIDIGGPCRSKIT 118
Query: 87 FQLQGLL-----------------DLFSIDTSLSL-AKGTFHGQGETAWPLNQCHKNSD- 127
++ G + F LS+ G G G+ W C N+
Sbjct: 119 LRILGAIVAPRNPDVWHGLNKRKWIYFHGVNHLSVEGGGRIDGMGQEWWS-RSCKINTTN 177
Query: 128 --CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------- 178
PT + F+ + + ++S+ HI C + + LK+ A A S
Sbjct: 178 PCLPAPTALTFHKCKSLKVRNLTVLNSQKMHIAFTSCMRVVASRLKVLAPASSPNTDGIH 237
Query: 179 --------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGL 212
S + + + CGPG GIS+GSLGK E++ +
Sbjct: 238 ISATKGVEIRDSLIRTGDDCISIVRNSSRVWIRNISCGPGHGISIGSLGKSNVWEKIQNV 297
Query: 213 TVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC-PYNKCNIK 271
V T NGVR+KTW G AS TF++I+M NV NPI+IDQ YC + C
Sbjct: 298 IVDGAYLYNTDNGVRIKTWQGGS-GFASKITFQNILMENVSNPIIIDQYYCDSRHPC--- 353
Query: 272 PKDSMPNIEIGNRNLV 287
K+ +++GN + +
Sbjct: 354 -KNQTSAVQVGNISFI 368
>gi|116786106|gb|ABK23977.1| unknown [Picea sitchensis]
gi|116789399|gb|ABK25238.1| unknown [Picea sitchensis]
gi|224284249|gb|ACN39860.1| unknown [Picea sitchensis]
Length = 440
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 146/348 (41%), Gaps = 61/348 (17%)
Query: 20 IDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFE 78
+D + V +V +GA +G++DDS+AF +W A LVP G YLV F
Sbjct: 51 LDPSAAVFSVDSYGAKGNGVSDDSQAFLAAWNAACT-SSSDSIFLVPHGNSYLVKPISFN 109
Query: 79 GPCK-----ASISFQLQGLLD-------------LFSIDTSLSL-AKGTFHGQGETAWPL 119
GPC A IS ++ D FS L++ G G GE W
Sbjct: 110 GPCNTGGLTAQISGRIVAPADPCNWNPEDRTIWLQFSKVQGLTIHGGGIIDGSGEKWWAG 169
Query: 120 NQCHKNSDCQLPTPIRFNFLNDSTITGIKSV---DSRYFHINILGCYNLKLNDLKITAHA 176
+ + L P F +N S+ ++ + +S+ FH+ I ++++ +L+I A
Sbjct: 170 SCSRDQNKVCLSVPFAF-VVNSSSNVHLRDLTFQNSQKFHVVISLSKHVEVENLQIVAPG 228
Query: 177 DS---------------------------------SKDILVSEVFCGPGQGISVGSLGKG 203
DS S I V+++ CGPG GIS+GSLGK
Sbjct: 229 DSPNTDGIHIFTSEHVMIRNCTIATGDDCVSIIAQSSHIQVNDIICGPGHGISIGSLGKY 288
Query: 204 IKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
+ V + V + + T NG+R+KTW G A F+ + M NV NPI+IDQ YC
Sbjct: 289 NATDTVSDVVVNRASLSGTQNGLRIKTWQGGS-GYAQGIIFQHVKMINVSNPIIIDQYYC 347
Query: 264 P-YNKCNIKPKDSMPNIEIGNRNLVYNGVNVKVEGPETTSL-CSNVKP 309
++CN + + N+ Y G+ E L CS P
Sbjct: 348 AGSSRCNQPAPCNNQTSAVQVNNVTYTGITGTSATQEAIKLACSATVP 395
>gi|302801183|ref|XP_002982348.1| hypothetical protein SELMODRAFT_116336 [Selaginella moellendorffii]
gi|300149940|gb|EFJ16593.1| hypothetical protein SELMODRAFT_116336 [Selaginella moellendorffii]
Length = 418
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 124/290 (42%), Gaps = 58/290 (20%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPP--GKYLVSFAEFEGPCKASI 85
NV D+GA++DG++DDS+AF +W A + +V+V P G YL+ F GPC +
Sbjct: 36 NVLDYGALSDGVSDDSEAFLAAWSAACESNY---SVMVIPENGTYLLQPTVFPGPCANVL 92
Query: 86 SFQLQGLL-----------------DLFSIDTSLSLAKGTFHGQGETAWPLN--QCHKNS 126
QL G+L +D GT GQGE+ W + + H N
Sbjct: 93 ISQLDGVLVAPGFFDWNSTNRRQWLRFQHLDGFTLEGTGTIDGQGESWWEQSCKRNHSNP 152
Query: 127 DCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-------- 178
P + N +T+ + V+S+ H+ N++ L I+A S
Sbjct: 153 CHPAPEALTIKSCNSTTVRNLHFVNSQQMHLVFDTGVNIRAIGLNISAPQKSPNTDGIHL 212
Query: 179 -------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLT 213
S I + V+CGPG GIS+GSLGK V +
Sbjct: 213 HDVQSGFIQDCVIATGDDCISIQTGSSRIHIKNVYCGPGHGISIGSLGKDGSAGNVRAVV 272
Query: 214 VRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
V T+NG+R+K+W H G ++++ M V NPI+IDQ YC
Sbjct: 273 VDGAVLNGTTNGLRIKSWQGGH-GKVYGVLYQNVRMIGVANPIIIDQYYC 321
>gi|255553121|ref|XP_002517603.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223543235|gb|EEF44767.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 424
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 131/302 (43%), Gaps = 56/302 (18%)
Query: 16 SVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSF 74
S R + RV V DFGA+ DG +D++AF +W A ++ + +++P G LV
Sbjct: 24 SARTRLRSKRVFFVSDFGAIGDGAANDTQAFKEAWEMACSFPS-RTRIVIPAGYTLLVHP 82
Query: 75 AEFEGPCKASISFQLQGL------------------LDLFSIDTSLSLAKGTFHGQGETA 116
+ GPCK+ ++ + G L ++ GT +G G
Sbjct: 83 VDLGGPCKSKLTLIISGTIVAPKDPAFWKGSNPRKWLYFHGVNHLTIDGGGTINGMGHRW 142
Query: 117 WPLN-QCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA 174
W + + + N+ C+ PT + F+ D I ++ V + H++ C + L +T+
Sbjct: 143 WAQSCKINPNNPCRHAPTAMTFHKCKDLKIMNLRVVYGQQMHLSFTNCIRVTAFHLVVTS 202
Query: 175 HADS---------------------------------SKDILVSEVFCGPGQGISVGSLG 201
A S S I + ++ CGPG GIS+GSLG
Sbjct: 203 PAFSPNTDGIHISASRHVEIRDSIVRTGDDCISIVGNSSRIKIRKIACGPGHGISIGSLG 262
Query: 202 KGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQL 261
K +V + + + T NG+R+KTW G A+ F+++ M NV NPI+IDQ
Sbjct: 263 KYDSSSKVHDILIDGAFLSNTDNGLRIKTWQGGS-GNATEIKFQNVFMKNVSNPIIIDQY 321
Query: 262 YC 263
YC
Sbjct: 322 YC 323
>gi|356526789|ref|XP_003531999.1| PREDICTED: polygalacturonase At1g48100 isoform 1 [Glycine max]
Length = 538
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 133/333 (39%), Gaps = 86/333 (25%)
Query: 19 GIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEF 77
G + NV DFGA DG +DD+KAF +W EA + T+LVP + V F
Sbjct: 114 GGHSPTTTFNVLDFGAKGDGKSDDTKAFQEAWAEACKVE--SSTMLVPADYVFFVGPISF 171
Query: 78 EGP-CKASISFQL--------------QGLLDLFSIDTSLSL---AKGTFHGQGETAW-- 117
GP CK SI FQL +GLL + + G G+G W
Sbjct: 172 SGPYCKPSIVFQLDGTIVAPTSPNAWGKGLLQWLEFSKLVGITIQGNGIIDGRGSVWWQD 231
Query: 118 ---------------PLNQCHKNSDCQLP--------------TPIRFNFLNDSTITGIK 148
PLN + LP T +RF + T+TGI
Sbjct: 232 NPYDDPIDDEEKLIVPLNHTIGSPSPPLPIQSEMGGKMPSVKPTALRFYGSFNPTVTGIT 291
Query: 149 SVDSRYFHINILGCYNLKLNDLKITAHADS----------SKDIL--------------- 183
+S H+ C + ++++ I++ DS SKD+L
Sbjct: 292 IQNSPQCHLKFDSCNGVMVHNVTISSPGDSPNTDGIHLQNSKDVLIYGSTMACGDDCISI 351
Query: 184 --------VSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSH 235
V V CGPG GIS+GSLGK V +TVR+ T NGVR+KTW
Sbjct: 352 QTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNMHNTMNGVRIKTW-QGG 410
Query: 236 IGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
G F +I ++ VE PIVIDQ YC C
Sbjct: 411 SGSVQGVLFSNIQVSEVELPIVIDQFYCDKRTC 443
>gi|356541683|ref|XP_003539303.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Glycine
max]
Length = 255
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 113/241 (46%), Gaps = 67/241 (27%)
Query: 136 FNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA------------------- 176
FNF N+S + S DS+ F++++L C N+ + I A +
Sbjct: 21 FNFRNNSVTEVVTSKDSKSFYVDVLRCKNVTFINFSIAASSTSPNTDGIHIGRSSGINIT 80
Query: 177 --------------DSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCT 222
D +K I + V GPG I+VG LGK ++ V LTVRNCT T
Sbjct: 81 NSFIGTCDDCISLGDDNKHITILNVTSGPGHDINVGRLGKYPNEKPVESLTVRNCTLNNT 140
Query: 223 SNGVRVKTWPDSHIG-IASNFTFEDIVMNNVENPIVIDQLYCPYNKCN------------ 269
+NG+R+KTW + I + S+F FEDI+M NV P++IDQ YCP N+CN
Sbjct: 141 NNGLRIKTWLGTPIKXLVSDFYFEDIIMVNVSKPVIIDQEYCPCNQCNKQTPSKIKISEV 200
Query: 270 ----IKPKDSMPN----------IEIGNRNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQ 315
IK + PN E+ + +L++NGV T + C++VK FG+
Sbjct: 201 TFKDIKGTSATPNGVTLICTRXGCELSDIDLIFNGV-------PTMAACTDVKVHNFGEN 253
Query: 316 I 316
I
Sbjct: 254 I 254
>gi|115444007|ref|NP_001045783.1| Os02g0130200 [Oryza sativa Japonica Group]
gi|113535314|dbj|BAF07697.1| Os02g0130200 [Oryza sativa Japonica Group]
gi|215741344|dbj|BAG97839.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 508
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 151/346 (43%), Gaps = 65/346 (18%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGP 80
A V+NV FGA DG +DD++AF +W++A + + LVP G+ Y V A F GP
Sbjct: 103 AGRNVVNVDSFGAAGDGCSDDTEAFLNAWKKACSLN--NAVFLVPGGRRYKVGAARFIGP 160
Query: 81 CKASISFQLQGLL--------------DLFSIDTSLSLAK----GTFHGQGETAWPLNQC 122
CK + Q+QG + L+ + + L+ A+ G G G W N C
Sbjct: 161 CKNRMIIQIQGTIVAPDEPSEWDPASPRLWLLFSGLAGARIQGGGLIDGSGSKWWA-NSC 219
Query: 123 H--KNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS- 178
++ C+ PT + + ++ ++ +++ H+ + +++L +++ + DS
Sbjct: 220 KIDRSKPCKGAPTALTIDSCRGVSVRNLRLQNAQQMHLTVSRSRDVRLASVRVDSPEDSP 279
Query: 179 --------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKD 206
S + + ++ CGPG GIS+GSLG+G
Sbjct: 280 NTDGIHVADSTAVTIQSCRIATGDDCISISNGSFAVRMRDIDCGPGHGISIGSLGQGGAF 339
Query: 207 EEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYN 266
V G+++ NGVR+KTW G N F + ++ V++PIVIDQ YC
Sbjct: 340 AAVDGVSLDGARVARAQNGVRIKTW-QGGAGYVRNVRFAGVRVDGVDHPIVIDQFYCDAT 398
Query: 267 KCNIKPKDSMPNIEIGNRNLVYNGVNVKVEGPETTSL-CSNVKPTL 311
+ ++ N+ + +V+ + E L CS+ P +
Sbjct: 399 R---PCRNRTSNVRVS--GVVFRNITGTARRAEAIRLACSDAVPCV 439
>gi|87162928|gb|ABD28723.1| Glycoside hydrolase, family 28 [Medicago truncatula]
Length = 392
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 127/294 (43%), Gaps = 59/294 (20%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS- 84
NV +GAV DG T+DS AF +W++ N +++P K +L+ F GPCK++
Sbjct: 16 FNVLQYGAVGDGKTNDSPAFLKAWKDVCNSKSGTSRLIIPAAKTFLLRPIAFRGPCKSNY 75
Query: 85 ISFQLQGLLDL-----------------FSIDTSLSLA-KGTFHGQGETAWPLNQCHKN- 125
I +L G + FS L ++ KGT G+G W C N
Sbjct: 76 IYIELSGNIIAPKTKSEYSGSPINTWIGFSFVNGLIISGKGTVDGRGSMWWK-QPCIGNP 134
Query: 126 ---SDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---- 178
+ C+ PT I N I G S++ HI + C ++++++ A +S
Sbjct: 135 PPGTSCRPPTAITLNRCYRFQIKGYTSINPARSHITLTSCKKGIISNIRLIAPGESPNTD 194
Query: 179 ------SKDILVSEVF-----------------------CGPGQGISVGSLGKGIKDEEV 209
S+DI V F CGPG GIS+GSLG + V
Sbjct: 195 GIDISASRDIQVLNSFIATGDDCIAISAGSSVIKITAITCGPGHGISIGSLGARGDTDIV 254
Query: 210 VGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
+ V+NCT T T GVR+KT G A TFE+I NPI IDQ YC
Sbjct: 255 EDVHVKNCTLTETLTGVRIKT-KQGGGGFARRITFENIKFVRAHNPIWIDQFYC 307
>gi|297802788|ref|XP_002869278.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315114|gb|EFH45537.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 431
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 122/275 (44%), Gaps = 63/275 (22%)
Query: 45 AFDTSWREAWNWDGIKGT---VLVPPGKYLVSFAEFEGPCKA-SISFQLQGLLDL----- 95
AF +W+ +G T V+ Y++ F+GPC + ++ Q+ G L+
Sbjct: 5 AFKGAWKALCEANGKGKTTSLVINANETYIIQPQLFQGPCASRNLHIQIDGKLEAPKMVK 64
Query: 96 ------------FSIDTSLSL-AKGTFHGQGETAWP-LNQCHKNSDCQLPTPIRFNFLND 141
F+ T L L G H GE W + H+ P I FN ++
Sbjct: 65 EWGNNGSKCWLCFTNVTGLVLNGSGILHPHGEAWWSSIEHSHR------PRTIGFNGSSN 118
Query: 142 STITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----------------------- 178
G+ ++S HI+IL C N+ L++ + A DS
Sbjct: 119 IIYNGLTQMNSPKNHISILNCTNVTLSNFHLIAPKDSPNTDGIDIALSNNIRIFNSSIQT 178
Query: 179 ----------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRV 228
S DI ++ V CGPG GIS+GSLG+G +++ V + VR+C+F T NG R+
Sbjct: 179 GDDCVAINGGSYDINITHVACGPGHGISIGSLGRGGENDTVQNVKVRHCSFNGTKNGARI 238
Query: 229 KTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
KTW GIA N +E+I + + PI+IDQ YC
Sbjct: 239 KTWTGGQ-GIAKNILYENITLTDANYPIIIDQHYC 272
>gi|357512075|ref|XP_003626326.1| hypothetical protein MTR_7g113910 [Medicago truncatula]
gi|355501341|gb|AES82544.1| hypothetical protein MTR_7g113910 [Medicago truncatula]
Length = 430
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 127/304 (41%), Gaps = 84/304 (27%)
Query: 17 VRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFA 75
+R RVL++ DFGA+ DG DD++AF W+ A + G V+ P GK +LV
Sbjct: 47 IRTRTRFRRVLSITDFGAIGDGFQDDTQAFLEVWKIACSLSGFI-VVVFPYGKTFLVHPI 105
Query: 76 EFEGPCKASISFQLQGLL----DLFSIDTSLSLAKGTFHGQGETAWP-------LNQCHK 124
+ GPC++ I+ ++ G + D + G G G+ W N CH
Sbjct: 106 DIGGPCRSKITLRISGTIVAPQDPEVWNGLNKRGGGRIDGMGQEWWSRSCKINTTNPCH- 164
Query: 125 NSDCQLPTP------------IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKI 172
P P + F+ + + V+S+ HI C + ++ L +
Sbjct: 165 ------PAPTVSGASKYGAKSLTFHRCKSLKVRNLTVVNSQKMHIAFTRCMRVVVSRLNV 218
Query: 173 TA---------------------HAD------------SSKDILVSEVFCGPGQGISVGS 199
+A H+D +S + + CGPG GIS+G+
Sbjct: 219 SAPSSSPNTDGIHISATKGIEISHSDVKTGDDCISIVRNSSQVWIRNFSCGPGHGISIGT 278
Query: 200 LGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVID 259
T T NG+R+KTW H G+ASN TF+DIVM NV NPI+ID
Sbjct: 279 Y------------------LTNTKNGLRIKTWQGGH-GLASNITFQDIVMENVSNPIIID 319
Query: 260 QLYC 263
Q YC
Sbjct: 320 QYYC 323
>gi|357448715|ref|XP_003594633.1| Polygalacturonase [Medicago truncatula]
gi|355483681|gb|AES64884.1| Polygalacturonase [Medicago truncatula]
Length = 463
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 134/312 (42%), Gaps = 66/312 (21%)
Query: 19 GIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAE-- 76
G +N V +V+ FGAV DG DD+ AF +W+ A + VL+ P Y
Sbjct: 59 GESPSNCVFDVRSFGAVGDGDADDTAAFRAAWKAAC---AVDSGVLLAPENYCFKITSTI 115
Query: 77 FEGPCKASISFQLQGLLD-------------------LFSIDTSLSLAKGTFHGQGETAW 117
F GPCK + FQ+ G L + +D G G GE W
Sbjct: 116 FSGPCKPGLVFQIDGTLMAPDGPNCWPEADSKSQWLVFYRLDQMTLNGTGIIEGNGEQWW 175
Query: 118 PLN-QCHKNSD-------CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLND 169
L + H++ D C PT IRF ++ + G+K +S FH+ GC + +++
Sbjct: 176 DLPCKPHRSPDGKTVSGPCVSPTMIRFFMSSNLVLRGLKIQNSPQFHVKFDGCQGVLIDE 235
Query: 170 LKITA----------HADSSKDI-----LVSE------------------VFCGPGQGIS 196
L I+A H +++D+ L+S V C P GIS
Sbjct: 236 LSISAPKLSPNTDGIHLGNTRDVGIYNSLISNGDDCISIGPGCSNVNVDGVTCAPTHGIS 295
Query: 197 VGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPI 256
+GSLG V LTVRN + NG+R+KTW G + TF++I M NV N I
Sbjct: 296 IGSLGVHNSHACVSNLTVRNSIIKESDNGLRIKTW-QGGTGSVTGLTFDNIQMENVRNCI 354
Query: 257 VIDQLYCPYNKC 268
IDQ YC +C
Sbjct: 355 NIDQFYCLSKEC 366
>gi|255553151|ref|XP_002517618.1| polygalacturonase, putative [Ricinus communis]
gi|223543250|gb|EEF44782.1| polygalacturonase, putative [Ricinus communis]
Length = 770
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 127/301 (42%), Gaps = 62/301 (20%)
Query: 23 TNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPC 81
+ R NV +GAV +GI DD+ AF +W + D + ++VP GK + V GPC
Sbjct: 7 SQRKYNVLSYGAVGNGIVDDTMAFMKAWNDTCK-DSRRPVMVVPMGKTFFVYPVTLFGPC 65
Query: 82 KAS------------------ISFQLQGLLDLFSIDTSLSLAK---GTFHGQGETAWPLN 120
+S + + G F L+++ G G+G W ++
Sbjct: 66 NSSNLIVMILGTIIAPDHPNVWNGRFHGTWLAFRYVNDLTVSGNGVGVLDGRGHRWWEIS 125
Query: 121 QCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA------ 174
C N I F + + I +V S HI + GC N++ + L + +
Sbjct: 126 -CRYNKS----KIISFEMCKNVNLRRISTVRSGGGHIAVFGCENVRFSILNLQSPGKSPN 180
Query: 175 -------HA--------------------DSSKDILVSEVFCGPGQGISVGSLGKGIKDE 207
H+ D S ++ ++ + CGPG GIS+GSLG
Sbjct: 181 TDGIHISHSNFVHIHKSVIGSGDDCISMLDRSYNVNITNINCGPGHGISIGSLGSDGTKV 240
Query: 208 EVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
+V +T+RN F T+NG R+KTW G N FE+I + N NPI IDQ YCP
Sbjct: 241 DVQNITIRNVNFYKTTNGARIKTWQGGS-GYVRNVLFENITLLNTSNPINIDQYYCPRGN 299
Query: 268 C 268
C
Sbjct: 300 C 300
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 108/218 (49%), Gaps = 48/218 (22%)
Query: 131 PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------ 178
PT + F+ N+ ++G+ ++S HI+ GC N+ ++DL ITA S
Sbjct: 470 PTALTFDQCNNLQLSGLTHINSAQDHIHFSGCSNVLVSDLHITAPESSPNTDGINISHSS 529
Query: 179 ---------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNC 217
S +I ++ V CGPG GIS+GSLGK K + V + V++C
Sbjct: 530 NIQIHDCTIGTGDDCVAIGGGSSNINITGVTCGPGHGISIGSLGKNGKSDTVEEVYVKDC 589
Query: 218 TFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMP 277
T T+NG+R+KTW G A FE I ++ V+NPI+IDQ YC + K K + S
Sbjct: 590 TLKGTTNGLRIKTWQGGS-GHARQIHFEGITLDAVDNPIIIDQYYCEH-KSACKNQTSAV 647
Query: 278 NIEIGNRNLVYNGVN--------VKVEGPETTSLCSNV 307
+ N+ Y GV+ +++ ++TS CSN+
Sbjct: 648 KVS----NIFYKGVHGTSITEEAIQLRCSQSTS-CSNI 680
>gi|41052554|dbj|BAD07736.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 481
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 152/346 (43%), Gaps = 65/346 (18%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGP 80
A V+NV FGA DG +DD++AF +W++A + + LVP G+ Y V A F GP
Sbjct: 76 AGRNVVNVDSFGAAGDGCSDDTEAFLNAWKKACSLN--NAVFLVPGGRRYKVGAARFIGP 133
Query: 81 CKASISFQLQGLL--------------DLFSIDTSLSLAK----GTFHGQGETAWPLNQC 122
CK + Q+QG + L+ + + L+ A+ G G G + W N C
Sbjct: 134 CKNRMIIQIQGTIVAPDEPSEWDPASPRLWLLFSGLAGARIQGGGLIDGSG-SKWWANSC 192
Query: 123 H--KNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS- 178
++ C+ PT + + ++ ++ +++ H+ + +++L +++ + DS
Sbjct: 193 KIDRSKPCKGAPTALTIDSCRGVSVRNLRLQNAQQMHLTVSRSRDVRLASVRVDSPEDSP 252
Query: 179 --------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKD 206
S + + ++ CGPG GIS+GSLG+G
Sbjct: 253 NTDGIHVADSTAVTIQSCRIATGDDCISISNGSFAVRMRDIDCGPGHGISIGSLGQGGAF 312
Query: 207 EEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYN 266
V G+++ NGVR+KTW G N F + ++ V++PIVIDQ YC
Sbjct: 313 AAVDGVSLDGARVARAQNGVRIKTW-QGGAGYVRNVRFAGVRVDGVDHPIVIDQFYCDAT 371
Query: 267 KCNIKPKDSMPNIEIGNRNLVYNGVNVKVEGPETTSL-CSNVKPTL 311
+ ++ N+ + +V+ + E L CS+ P +
Sbjct: 372 R---PCRNRTSNVRVS--GVVFRNITGTARRAEAIRLACSDAVPCV 412
>gi|218189987|gb|EEC72414.1| hypothetical protein OsI_05716 [Oryza sativa Indica Group]
Length = 481
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 152/346 (43%), Gaps = 65/346 (18%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGP 80
A V+NV FGA DG +DD++AF +W++A + + LVP G+ Y V A F GP
Sbjct: 76 AGRNVVNVDSFGAAGDGCSDDTEAFLNAWKKACSLN--NAVFLVPGGRRYKVGAARFIGP 133
Query: 81 CKASISFQLQGLL--------------DLFSIDTSLSLAK----GTFHGQGETAWPLNQC 122
CK + Q+QG + L+ + + L+ A+ G G G + W N C
Sbjct: 134 CKNRMIIQIQGTIVAPDEPSEWDPASPRLWLLFSGLAGARIQGGGLIDGSG-SKWWANSC 192
Query: 123 H--KNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS- 178
++ C+ PT + + ++ ++ +++ H+ + +++L +++ + DS
Sbjct: 193 KIDRSKPCKGAPTALTIDSCRGVSVRNLRLQNAQQMHLTVSRSRDVRLASVRVDSPEDSP 252
Query: 179 --------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKD 206
S + + ++ CGPG GIS+GSLG+G
Sbjct: 253 NTDGIHVADSTAVTIQSCRIATGDDCISISNGSFAVRMRDIDCGPGHGISIGSLGQGGAF 312
Query: 207 EEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYN 266
V G+++ NGVR+KTW G N F + ++ V++PIVIDQ YC
Sbjct: 313 AAVDGVSLDGARVARAQNGVRIKTW-QGGAGYVRNVRFAGVRVDGVDHPIVIDQFYCDAT 371
Query: 267 KCNIKPKDSMPNIEIGNRNLVYNGVNVKVEGPETTSL-CSNVKPTL 311
+ ++ N+ + +V+ + E L CS+ P +
Sbjct: 372 R---PCRNRTSNVRVS--GVVFRNITGTARRAEAIRLACSDAVPCV 412
>gi|296082715|emb|CBI21720.3| unnamed protein product [Vitis vinifera]
Length = 90
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 59/75 (78%)
Query: 197 VGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPI 256
+GSLGK +E VVG++V+NCTFT T NGVRVKTWP SH G A FEDI MNNV NPI
Sbjct: 1 MGSLGKYSNEEPVVGISVKNCTFTNTQNGVRVKTWPASHQGTAFEMHFEDIAMNNVGNPI 60
Query: 257 VIDQLYCPYNKCNIK 271
+IDQ YCP+N+CN+K
Sbjct: 61 IIDQEYCPHNQCNLK 75
>gi|157165820|gb|ABV24999.1| polygalacturonase 2 [Oncidium Gower Ramsey]
Length = 483
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 132/307 (42%), Gaps = 66/307 (21%)
Query: 24 NRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKY--LVSFAEFEGP- 80
N + NV DFGA DG+TDD+KAF+ +W A ++ + + P Y V F GP
Sbjct: 86 NSMFNVPDFGAKGDGVTDDTKAFEDAWMSACQ---VEASTMQIPSDYTFFVGPISFSGPY 142
Query: 81 CKASISFQLQG-----------------LLDLFSIDTSLSLAKGTFHGQGETAW------ 117
C+ +I FQL G ++ + GT G+G W
Sbjct: 143 CQPNIIFQLDGTIVAPTNSKIWSSGLLWWIEFTKLKGITIQGSGTIEGRGSVWWSQPEPN 202
Query: 118 --PLNQCHKNSDCQL-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA 174
P+++ + + PT +RF + T+TGI +S H+ C + + ++ +T+
Sbjct: 203 DEPISEELGSKMPSIKPTALRFYGSYNVTVTGITIQNSPQCHLKFDNCEAVHVYNMSVTS 262
Query: 175 HADS----------SKDILVSE-----------------------VFCGPGQGISVGSLG 201
DS SKD+++ V CGPG GIS+G LG
Sbjct: 263 PGDSPNTDGIHLQNSKDVVIHHCNLSCGDDCVSIQTGCNGVKIHNVNCGPGHGISIGGLG 322
Query: 202 KGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQL 261
+ V +TV++ T GVR+KTW G + F +I ++ V+ PIVIDQ
Sbjct: 323 RDNTKACVSNITVQDVNMYGTMTGVRIKTWQGGS-GSVQSIRFSNIRVSEVQTPIVIDQF 381
Query: 262 YCPYNKC 268
YC + C
Sbjct: 382 YCDRSSC 388
>gi|145336060|ref|NP_173760.2| polygalacturonase [Arabidopsis thaliana]
gi|332192268|gb|AEE30389.1| polygalacturonase [Arabidopsis thaliana]
Length = 460
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 130/293 (44%), Gaps = 59/293 (20%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
++NV FGA DG++DD++AF ++W +A + K LVP G+ YLV+ +F GPC+
Sbjct: 66 LVNVDTFGAAGDGVSDDTQAFVSAWSKACSTS--KSVFLVPEGRRYLVNATKFNGPCEQK 123
Query: 85 ISFQLQGL------------------LDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNS 126
+ Q+ G L+ + + KG G G W + C KN
Sbjct: 124 LIIQIDGTIVAPDEPSNWDSKFQRIWLEFSKLKGVVFQGKGVIDGSGSKWWAAS-CKKNK 182
Query: 127 D--CQ-LPTPIRFNFLNDSTITGIKSVDSRYFH--------------------------- 156
C+ PT + + ++G+ +S+ +
Sbjct: 183 SNPCKSAPTALTIESSSGVKVSGLTIQNSQQMNFIIARSDSVRVSKVMVSSPGDSPNTDG 242
Query: 157 INILGCYNLKLNDLKITAHAD------SSKDILVSEVFCGPGQGISVGSLGKGIKDEEVV 210
I+I G N+ L D KI D +S +I + ++CGPG GIS+GSLGK V
Sbjct: 243 IHITGSTNVILQDCKIGTGDDCVSIVNASSNIKMKNIYCGPGHGISIGSLGKDNTTGIVT 302
Query: 211 GLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
+ + T+NG+R+KT+ G F ++ M +V NPI+IDQ YC
Sbjct: 303 QVVLDTALLRETTNGLRIKTYQGGS-GYVQGIRFTNVEMQDVANPILIDQFYC 354
>gi|302766173|ref|XP_002966507.1| hypothetical protein SELMODRAFT_85947 [Selaginella moellendorffii]
gi|300165927|gb|EFJ32534.1| hypothetical protein SELMODRAFT_85947 [Selaginella moellendorffii]
Length = 418
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 123/290 (42%), Gaps = 58/290 (20%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPP--GKYLVSFAEFEGPCKASI 85
NV D+GA++DG++DDS+AF +W A + +V+V P G YL+ F GPC +
Sbjct: 36 NVLDYGALSDGVSDDSEAFLAAWSAACESNY---SVMVIPENGTYLLQPTVFPGPCGLGM 92
Query: 86 SFQLQGLL-----------------DLFSIDTSLSLAKGTFHGQGETAWPLN--QCHKNS 126
QL G+L +D GT GQGE+ W + + H N
Sbjct: 93 KVQLDGVLVAPGFFDWNSTNRRQWLRFQHLDGFTLEGTGTIDGQGESWWEQSCKRNHSNP 152
Query: 127 DCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-------- 178
P + N +T+ + V+S+ H+ N++ L I+A S
Sbjct: 153 CHPAPEALTIKSCNSTTVRNLHFVNSQQMHLVFDTGVNIRAIGLNISAPQKSPNTDGIHL 212
Query: 179 -------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLT 213
S I + V+CGPG GIS+GSLGK V +
Sbjct: 213 HDVQSGFIQDCVIATGDDCISIQTGSSRIHIKNVYCGPGHGISIGSLGKDGSAGNVRAVV 272
Query: 214 VRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
V T+NG+R+K+W G ++++ M V NPI+IDQ YC
Sbjct: 273 VDGAVLNGTTNGLRIKSWQGGR-GKVYGVLYQNVRMIGVANPIIIDQYYC 321
>gi|5902370|gb|AAD55472.1|AC009322_12 Similar to polygalacturonases [Arabidopsis thaliana]
Length = 381
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 134/296 (45%), Gaps = 66/296 (22%)
Query: 32 FGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPC-KASISFQL 89
+GAV DGI DD+ AF +W +A G+V VP GK +L++ F GPC + F +
Sbjct: 3 YGAVGDGIVDDTSAFQKAWEDACKGSSKMGSVNVPAGKVFLLNSLHFTGPCIPKPLLFII 62
Query: 90 QGLLDLFS--------------------IDTSLSLAKGTFHGQGETAWPLN-QCHKNSDC 128
G + S +D + +G GQG++ W ++ + H +C
Sbjct: 63 DGEMIAQSDPQKWGNGENGVIPWLIFDQVDGLAIVGRGLLDGQGKSWWDIHCRDHPGPNC 122
Query: 129 QLPTP-------IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA------- 174
P + F+ + T+ ++ +S H+ ++G N+ ++D+KIT+
Sbjct: 123 ICLAPTIYFSQMMTFSNCGNVTLKSLRFRNSAQTHVLVMGSQNVYIDDIKITSPEASPNT 182
Query: 175 ---HADSSKDILVSE-----------------------VFCGPGQGI--SVGSLGKGIKD 206
H SS + ++ + CGPG G+ S+GSLG+G +
Sbjct: 183 DGIHITSSTAVSINHSDIATGDDCVSIGDQVNNLNVTFMNCGPGHGVRDSIGSLGRGGTE 242
Query: 207 EEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLY 262
V + V + FT T+NG R+KTWP G F DI ++V+NPI+IDQ Y
Sbjct: 243 VTVENIRVSHVNFTGTTNGARIKTWPGG-TGYVRGIEFFDIRFSSVQNPIIIDQFY 297
>gi|297734027|emb|CBI15274.3| unnamed protein product [Vitis vinifera]
Length = 387
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 149/340 (43%), Gaps = 80/340 (23%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP-PGKYLVSFAEFEGPCKA 83
NV D+GA+ +G TDDS+AF +W + T LVP ++L++ FEG C++
Sbjct: 24 HTFNVMDYGAIGNGRTDDSEAFMKAWSDVCKASA-SPTFLVPGDRRFLINPVVFEGRCRS 82
Query: 84 S-ISFQLQGLLDLFSIDTSLSLAKGTFHGQGETAWPL--NQCH-----KNSDCQLPTPIR 135
I F++ G + S + W QCH K+ D + +
Sbjct: 83 KKIKFKVDGTITAPS---------------EPSKWKCINKQCHSWISFKHVDGLVISDCM 127
Query: 136 FNFLNDSTITGIKS----------VDSRYFHINILGCYNLKLNDLKITAHADS------- 178
++ N + +S D+ + H+ C +K++ + I A DS
Sbjct: 128 YSLTNLQALVVARSNNVQLHDLSFKDNPHMHVVFHHCDGVKISHISIDAPEDSPNTDGIH 187
Query: 179 --------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGL 212
S I + + CGPG GIS+GSLGK E V +
Sbjct: 188 LKETASVIIEHCTIGTGDDCISLVDGSTHIDMRHIKCGPGHGISIGSLGKFGLSETVEYI 247
Query: 213 TVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKP 272
V++ FT T+NGVR+KTW G A N FE I ++ E PI+IDQ YC + +C+ KP
Sbjct: 248 HVKDAQFTGTTNGVRIKTWQGGR-GHARNMIFEKIRSSDSEYPIIIDQFYCDHTECHDKP 306
Query: 273 KDSMPNIEIGNRNLVYNGVNVKVEGPETTSL---CSNVKP 309
+EI RN+ Y ++VK + T++ CS+ P
Sbjct: 307 N----AVEI--RNISY--IDVKGTSKKETAVKIACSDTVP 338
>gi|297605988|ref|NP_001057816.2| Os06g0545800 [Oryza sativa Japonica Group]
gi|255677132|dbj|BAF19730.2| Os06g0545800, partial [Oryza sativa Japonica Group]
Length = 252
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 108/209 (51%), Gaps = 40/209 (19%)
Query: 136 FNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----------------- 178
+F+N+ I+GI V+ ++FH+N+ N+ + D+ ITA DS
Sbjct: 8 LDFVNNGLISGISLVNPKFFHMNVFKSKNITIKDVTITAPGDSPNTDGIHMGDSSKISII 67
Query: 179 ----------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCT 222
++ + +S V CGPG GISVGSLG+ +++V +TV+NC +
Sbjct: 68 DTVIGTGDDCISIGPGTEGVNISGVTCGPGHGISVGSLGRYKDEKDVTDVTVKNCVLKKS 127
Query: 223 SNGVRVKTWPD-SHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNIEI 281
+NGVR+K++ D + + AS FT+E+I M +V NPI+ID YCP C + N ++
Sbjct: 128 TNGVRIKSYEDAASVLTASKFTYENIKMEDVANPIIIDMKYCPNKICT-----ANGNSKV 182
Query: 282 GNRNLVYNGVNVKVEGPETTS-LCSNVKP 309
+++ + + PE S LCS+ P
Sbjct: 183 TIKDITFKNITGTSSTPEAVSLLCSDKLP 211
>gi|59939885|gb|AAX12520.1| polygalacturonase [Psidium guajava]
Length = 119
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 75/113 (66%), Gaps = 3/113 (2%)
Query: 153 RYFHINILGCYNLKLNDLKITAHADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGL 212
R +NI G +++ D ++ D S+ + V V CGPG GIS+GSLGK ++ VVG+
Sbjct: 7 RSTGVNITGA-DIRTGDDCVSL-GDGSQQVNVESVTCGPGHGISIGSLGKYHDEQPVVGV 64
Query: 213 TVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQL-YCP 264
TVRNCT T T NG+RVKTWP S G+A+N FEDI + NV PI+IDQ YCP
Sbjct: 65 TVRNCTLTNTPNGIRVKTWPASPGGVATNMHFEDITVKNVSTPILIDQKNYCP 117
>gi|59860148|gb|AAX09642.1| polygalacturonase [Malus x domestica]
Length = 292
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 126/288 (43%), Gaps = 60/288 (20%)
Query: 76 EFEGPCKASISFQLQGLLD---------------LF-SIDTSLSLAKGTFHGQGETAWPL 119
EF GPCK+ ++ Q+ G ++ +F ++ L + GT +G G W
Sbjct: 5 EFSGPCKSQLTLQIYGTIEASEDRSIYKDIDHWLIFDNVQNLLVVGPGTINGNGNIWWK- 63
Query: 120 NQCHKNSD----CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH 175
N C PT + FN N+ + + D++ H+ C N++ + L +TA
Sbjct: 64 NSCKIKPQPPCGTYAPTAVTFNRCNNLVVKNLNIQDAQQIHVIFQNCINVQASRLTVTAP 123
Query: 176 ADS---------------------------------SKDILVSEVFCGPGQGISVGSLGK 202
DS S+ + +++ CGPG GIS+GSLG+
Sbjct: 124 EDSPNTDGIHVTNTQNITISSSVIGTGDDCISIVSGSQRVQATDITCGPGHGISIGSLGE 183
Query: 203 GIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLY 262
++ V G+ V + TSNG+R+KTW G +N F+++ MN+V NPI+IDQ Y
Sbjct: 184 DGSEDHVSGVFVNGAKLSGTSNGLRIKTWKGGS-GSVTNIVFQNVQMNDVTNPIIIDQNY 242
Query: 263 CPYNKCNIKPKDSMPNIEIGNRNLVYNGVN-VKVEGPETTSLCSNVKP 309
C + + K + S + +N++Y + G T CS P
Sbjct: 243 CDHKTKDCKQQKSAVQV----KNVLYQNIRGTSASGDAITLNCSQSVP 286
>gi|357128627|ref|XP_003565972.1| PREDICTED: probable polygalacturonase At1g80170-like [Brachypodium
distachyon]
Length = 445
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 124/304 (40%), Gaps = 64/304 (21%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
+L + DFGAV DGI +D++AF +W A G + VP GK Y + GPC+
Sbjct: 32 LLTLDDFGAVGDGIANDTQAFVDAWSAACG-TGDTTYLNVPAGKSYQIWPLTLSGPCRND 90
Query: 85 ISFQLQGLLDL---------------------FSIDTSLSLAKGTF-HGQGETAWPLNQC 122
I + G + F + L+L+ G G+G+ W
Sbjct: 91 IKLLISGNIVAPENPDDWQEEGSSSQVTQWLHFRGMSGLALSGGGIVDGRGQQWWARQTQ 150
Query: 123 HKNSD------CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 176
+ NS P + F D ++ GI +S H+ CYN+K N L++TA
Sbjct: 151 NSNSSQPQPAMAAAPKAVHFEDCEDVSVMGITVQNSPRQHLAFTRCYNVKANYLRVTAPE 210
Query: 177 DSS---------------------------------KDILVSEVFCGPGQGISVGSLGKG 203
DS D+ + V CGPG GIS+G LG+
Sbjct: 211 DSPGTVGVLLASSTNVHVMDDLFSVGGDCVSIVGNCTDVRLRAVSCGPGAGISIGDLGED 270
Query: 204 IKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
++ + + + T NGVRVKT D G A F I+M NV NPI+IDQ Y
Sbjct: 271 QSQHKIEKIKMDTLFISNTKNGVRVKTHEDG-CGFARKVKFAQILMRNVSNPIIIDQHYS 329
Query: 264 PYNK 267
N+
Sbjct: 330 YSNR 333
>gi|449524613|ref|XP_004169316.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 227
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 103/226 (45%), Gaps = 61/226 (26%)
Query: 155 FHINILGCYNLKLNDLKITA----------HADSSK-----------------------D 181
FH ++ CYN ++KI A H +SK +
Sbjct: 3 FHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHSTEN 62
Query: 182 ILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASN 241
I V+ V CGPG G+SVGSLGK K++ V + V+NCT +NG R+KTW G+AS
Sbjct: 63 ITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASRISGLASR 122
Query: 242 FTFEDIVMNNVENPIVIDQLYCPYNK-------CNIKPKD----SMPN------------ 278
FEDIVM NV+NPI+IDQ Y K N++ K+ S N
Sbjct: 123 IIFEDIVMYNVKNPIIIDQTYSTKKKKESNWKVSNVQFKNIRGTSTTNVAVLLECSKLFP 182
Query: 279 ---IEIGNRNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 321
+E+ + NL Y G N++ S CSN K FG Q P CV
Sbjct: 183 CEGVELRDINLSYGGTNLR--NTTIVSSCSNAKIATFGVQKPPPCV 226
>gi|414877334|tpg|DAA54465.1| TPA: polygalacturonase [Zea mays]
Length = 502
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 137/306 (44%), Gaps = 64/306 (20%)
Query: 26 VLNVKDFGAVADG--ITDDSKAFDTSWREAWNWDGIKGTVLVPP-GKYLVSFAEFEGPCK 82
V +V+ FGA DG + DD+ AF +W+ A + D T+LVP G + ++ F GPCK
Sbjct: 100 VFDVRAFGASGDGSCVDDDTAAFRAAWKAACSSDSAAATLLVPSDGVFTIASTIFSGPCK 159
Query: 83 ASISFQLQGLLD------------------LFSIDTSLSLA-KGTFHGQGETAWPLN-QC 122
++FQ+ G+L +F L+LA +GT G GE W L +
Sbjct: 160 PDLTFQIDGVLMPPDGPASWPATDSRKQWIVFYKADRLTLAGEGTIEGNGEEWWDLPCKP 219
Query: 123 HKNSD-------CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH 175
H+ + C P IRF ND T+ G++ +S FH+ C ++++ L +++
Sbjct: 220 HRGPNGSTLRGPCDSPALIRFFSSNDVTVCGLRIENSPQFHLRFDDCERVRVDGLFVSSP 279
Query: 176 ADSS---------------------------------KDILVSEVFCGPGQGISVGSLGK 202
A S D+ V + CG G GIS+GSLG
Sbjct: 280 ASSPNTDGVHVENTKSVQILNSRIYNGDDCVSIGAGCSDVHVENITCGHGHGISIGSLGV 339
Query: 203 GIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLY 262
V +TVRN + NGVR+KTW G S F + M NV+N IVIDQ Y
Sbjct: 340 HNTHACVSNVTVRNVRILDSDNGVRIKTW-QGGAGAVSAVEFTGVQMQNVKNCIVIDQYY 398
Query: 263 CPYNKC 268
C + C
Sbjct: 399 CLGHGC 404
>gi|229577245|ref|NP_001132604.2| uncharacterized protein LOC100194076 [Zea mays]
gi|195645302|gb|ACG42119.1| polygalacturonase [Zea mays]
Length = 502
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 137/306 (44%), Gaps = 64/306 (20%)
Query: 26 VLNVKDFGAVADG--ITDDSKAFDTSWREAWNWDGIKGTVLVPP-GKYLVSFAEFEGPCK 82
V +V+ FGA DG + DD+ AF +W+ A + D T+LVP G + ++ F GPCK
Sbjct: 100 VFDVRAFGASGDGSCVDDDTAAFRAAWKAACSSDSAAATLLVPSDGVFTIASTIFSGPCK 159
Query: 83 ASISFQLQGLLD------------------LFSIDTSLSLA-KGTFHGQGETAWPLN-QC 122
++FQ+ G+L +F L+LA +GT G GE W L +
Sbjct: 160 PDLTFQIDGVLMPPDGPASWPATDSRKQWIVFYKADRLTLAGEGTIEGNGEEWWDLPCKP 219
Query: 123 HKNSD-------CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH 175
H+ + C P IRF ND T+ G++ +S FH+ C ++++ L +++
Sbjct: 220 HRGPNGSTLRGPCDSPALIRFFSSNDVTVCGLRIENSPQFHLRFDDCERVRVDGLFVSSP 279
Query: 176 ADSS---------------------------------KDILVSEVFCGPGQGISVGSLGK 202
A S D+ V + CG G GIS+GSLG
Sbjct: 280 ASSPNTDGVHVENTKSVQILNSRIYNGDDCVSIGAGCSDVHVENITCGHGHGISIGSLGV 339
Query: 203 GIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLY 262
V +TVRN + NGVR+KTW G S F + M NV+N IVIDQ Y
Sbjct: 340 HNTHACVSNVTVRNVRILDSDNGVRIKTW-QGGAGAVSAVEFTGVQMQNVKNCIVIDQYY 398
Query: 263 CPYNKC 268
C + C
Sbjct: 399 CLGHGC 404
>gi|50313466|gb|AAT74603.1| polygalacturonase [Musa acuminata AAA Group]
Length = 419
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 125/267 (46%), Gaps = 34/267 (12%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPP-GKYLVSFAEFEGPCKASI 85
+V+ FGAV DG+TDD++AF ++WR A + + T+ VP G ++++ F GPC+ +
Sbjct: 71 FDVRSFGAVGDGVTDDTEAFRSAWRAACSVE--SATLFVPSDGVFMITSTIFPGPCQPGL 128
Query: 86 SFQLQGLLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPTP----IRFNFLND 141
FQ+ + S + S + ++ D ++ I+F+ D
Sbjct: 129 VFQV-----ILSTKITCSGCIXLLLWIQLIRFFMSCNLTVRDLRIENSPQFHIKFDACED 183
Query: 142 STITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSS--------------------KD 181
I G+ S++S F N G + + I S+ D
Sbjct: 184 VHIEGL-SINSPAFSPNTDGVHIENTRSVTIYNSMISNGWKRLLSGSGDDCISIGPGCSD 242
Query: 182 ILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASN 241
+ + V CGPG GIS+GSLG + V ++V+N + NGVR+KTW +G S+
Sbjct: 243 VDIQNVTCGPGHGISIGSLGMHNSEACVSNVSVKNAVIRNSDNGVRIKTW-QGGMGSVSD 301
Query: 242 FTFEDIVMNNVENPIVIDQLYCPYNKC 268
+F+ + M NV NPI+IDQ YC C
Sbjct: 302 ISFDTVYMENVRNPIIIDQYYCLSESC 328
>gi|222617828|gb|EEE53960.1| hypothetical protein OsJ_00563 [Oryza sativa Japonica Group]
Length = 409
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 129/282 (45%), Gaps = 57/282 (20%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVL-NVKDFGAVADGITDDSKAFDTSWREAWNWDGI 59
+ + A+++ ++ + + R +A R L NV DF A DG TDD+KAF +W E N +G
Sbjct: 115 IWVEAKYTFVLLLVLT-RSSEAQKRPLYNVLDFNATGDGNTDDTKAFLAAWEETCNNEGW 173
Query: 60 KGTVLVPPGK-YLVSFAEFEGPCKASISFQLQG---------------LLDLFSIDTSLS 103
+++P G+ +L+ +F G CK+ I Q+ G L+ +S++
Sbjct: 174 P-ILIIPGGRTFLLKQIKFNGSCKSPIKIQMDGNIVAPNYIWASEADNLITFYSVNNLTL 232
Query: 104 LAKGTFHGQGETAWPLNQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGC 162
G G+G W C+ C P + F N+ ++T I +S H+ + C
Sbjct: 233 DGNGQIDGKGAIWW---TCYTEKKCVYRPVILAFAACNNLSVTNIHLTNSADKHMTVYRC 289
Query: 163 YNLKLNDLKITAHADS---------------------------------SKDILVSEVFC 189
+ ++++ I A DS + D+ ++++ C
Sbjct: 290 SQVHVHNVTIVAPGDSPNTDGITMAISDHVYISNCSIQSGDDCVSMLSYTTDVNITDITC 349
Query: 190 GPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTW 231
GPG GISVGSLG+ + V +TV NC F T NGVR+K+W
Sbjct: 350 GPGHGISVGSLGR-FETALVERITVSNCNFIGTKNGVRIKSW 390
>gi|255568778|ref|XP_002525360.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223535323|gb|EEF36998.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 510
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 142/350 (40%), Gaps = 92/350 (26%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
++NV FGA DG++DD++AF +W+ A + K LVPPG+ YLV+ +F+GPC+
Sbjct: 62 LVNVDSFGAAGDGVSDDTQAFVNAWKTACSTP--KSVFLVPPGRRYLVNATKFKGPCEEK 119
Query: 85 ISFQLQGL------------------LDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNS 126
+ Q+ G LD ++ L G G G + W + C KN
Sbjct: 120 LVIQIDGTIVAPAEPENWDPNLPRIWLDFSKLNGVLFQGHGVIDGSG-SKWWASSCKKNK 178
Query: 127 D--CQ-LPTPIRFNFLNDSTITGIKSVDSRYFH--------------------------- 156
C+ PT + + + + G+ +S+ +
Sbjct: 179 TNPCRGAPTALTIDSSSSVKVRGLTIQNSQQMNFVIARSASVRVSRVLVSSPGDSPNTDG 238
Query: 157 INILGCYNLKLNDLKITAHAD------SSKDILVSEVFCGPGQGISVGSLGKGIKDEEVV 210
I+I N+ L D KI D S I + +FCGPG G+S+GSLGK V
Sbjct: 239 IHITDSTNVALQDCKIGTGDDCVSIVNGSSGIKMKRIFCGPGHGVSIGSLGKDNSTGIVS 298
Query: 211 GLTVRNCTFTCTSNGVRVKTW------------------------PDSHI---------- 236
+ + T+NG+R+KTW ++I
Sbjct: 299 KVVLDTAFLKETTNGLRIKTWQVILLPIIDMKSLIVQNTEVCTSRSSNYIHSVTLLQGGN 358
Query: 237 GIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNIEIGNRNL 286
G FE++ M+NV NPI+IDQ YC K ++ EI RN+
Sbjct: 359 GYVRGIRFENVQMDNVANPIIIDQFYCDSPKTCQNQTSAVKISEIMYRNV 408
>gi|357436957|ref|XP_003588754.1| PGN [Medicago truncatula]
gi|355477802|gb|AES59005.1| PGN [Medicago truncatula]
Length = 397
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 135/307 (43%), Gaps = 54/307 (17%)
Query: 9 LLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG 68
L+ S ++ + + NV +GA DG +DD++AF +W+ + T++VP
Sbjct: 10 LIFSIVSCNSFVGFSQNTFNVLQYGAKGDGTSDDTQAFLEAWKALCAANQGTPTLVVPAE 69
Query: 69 K-YLVSFAEFEGPCKA-SISFQLQGLLDLFSIDTSLSLAK----------------GTFH 110
+ V A F+GPCK+ ++ Q+ G + D S +K G
Sbjct: 70 HTFFVRQATFQGPCKSQNLHIQIMGNIIAPHRDAWGSCSKRWLYFLNVHGMTVDGSGVID 129
Query: 111 GQGETAWP-LNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLND 169
G+GE W LN + PT + F + ++G+ ++ H+ ++ ++ ++
Sbjct: 130 GRGEAWWSNLNGTKGCAANARPTALLFERCDGLQLSGLTHINGPAMHVYVVHSQDVTISH 189
Query: 170 LKITAHADS---------------------------------SKDILVSEVFCGPG-QGI 195
+ I++ DS S+ I V++V CGPG GI
Sbjct: 190 INISSSKDSYNTDGIDISNSIRVNIHDSIIQSGDDCIAIKGGSQFINVTQVTCGPGTHGI 249
Query: 196 SVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENP 255
SVGSLG G +E + VRNCTF + R+KTWP G A F+ I++N + NP
Sbjct: 250 SVGSLGGGGAEEFADRVNVRNCTFNGADSAARIKTWPGGK-GYAKAIIFDHIIVNQIRNP 308
Query: 256 IVIDQLY 262
I I Q Y
Sbjct: 309 ISIQQHY 315
>gi|255556512|ref|XP_002519290.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223541605|gb|EEF43154.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 479
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 139/311 (44%), Gaps = 64/311 (20%)
Query: 19 GIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEF 77
G ++ + +V +GAV DG TDD+ AF +W+ A + G +L P G ++++ F
Sbjct: 78 GKSTSDCIFDVTSYGAVGDGSTDDTAAFVAAWKAACAVE--SGVILAPSGYSFMITSTIF 135
Query: 78 EGPCKASISFQLQGLLD------------------LFSIDTSLSL-AKGTFHGQGETAWP 118
GPC+ + FQ+ G L +F T ++L KGT G GE W
Sbjct: 136 SGPCQPGLVFQVDGCLMPPDGPDSWPEKDSKKQWLVFYRLTDMTLTGKGTIEGNGEKWWD 195
Query: 119 LN-QCHKNSD-------CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
L + H++ + C P IRF ++ ++G+ +S FH+ GC + + L
Sbjct: 196 LPCKPHRSPNGESSKEPCDSPAMIRFFMSSNLVVSGLSIQNSPQFHMKFDGCEGVLIEKL 255
Query: 171 KITA----------HADSSK-----------------------DILVSEVFCGPGQGISV 197
I++ H +++K ++ + V CGP GIS+
Sbjct: 256 SISSPKLSPNTDGIHIENTKTVGIYNSMISNGDDCISIGTGCSNVDIEGVTCGPSHGISI 315
Query: 198 GSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIV 257
GSLG V +TV N + NGVR+KTW G S +F++I M NV N ++
Sbjct: 316 GSLGVHNSQACVSNITVSNAIIRDSDNGVRIKTW-QGGTGCVSGISFQNIQMENVRNCMI 374
Query: 258 IDQLYCPYNKC 268
IDQ YC C
Sbjct: 375 IDQYYCMSKAC 385
>gi|218200954|gb|EEC83381.1| hypothetical protein OsI_28796 [Oryza sativa Indica Group]
Length = 236
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 116/233 (49%), Gaps = 56/233 (24%)
Query: 144 ITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADSSK------------- 180
+ + SV+S++FH+ +L C K++ +KI+A H + S
Sbjct: 3 VQNVASVNSKFFHMALLQCSGAKISGVKISAPESSPNTDGIHIERSNGVSIADTTIATGD 62
Query: 181 ----------DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKT 230
+I V+ V CGPG G+SVGSLG+ + + +V + VR+ TF T NGVR+KT
Sbjct: 63 DCISIGQGNDNIDVARVHCGPGHGMSVGSLGRYVGEGDVTRIHVRDMTFHGTMNGVRIKT 122
Query: 231 WPDSHIGI-ASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK--PKDSMPNIEIGN---- 283
W +S A++ FE++VMN+V+NPI+IDQ YCPY C K ++ +++ N
Sbjct: 123 WENSPTKSNAAHMLFENLVMNDVQNPIIIDQKYCPYYNCEHKFVSGVTIKDVQFKNIKGT 182
Query: 284 ---------------RNLVYNGVNVKVEGPE-TTSLCSNVKPTLFGKQIPATC 320
+ +V V+++ +G ++S C NV+ G Q P C
Sbjct: 183 ATTQVAVLLKCGVPCQGVVLQDVDLRYKGNGVSSSKCENVRAKYAGFQNPKPC 235
>gi|157165824|gb|ABV25001.1| polygalacturonase 4 [Oncidium Gower Ramsey]
Length = 483
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 131/305 (42%), Gaps = 66/305 (21%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKY--LVSFAEFEGP-CK 82
+ NV DFGA DG+TDD+KAF+ +W A ++ + + P Y LV F GP C+
Sbjct: 88 MFNVLDFGAKGDGVTDDTKAFEDAWMSACQ---VEASTMQIPSDYTFLVGPISFSGPYCQ 144
Query: 83 ASISFQLQG-----------------LLDLFSIDTSLSLAKGTFHGQGETAW-------- 117
+I FQL G ++ + GT G+G W
Sbjct: 145 PNIIFQLDGTIVAPTNSKIWSSGLLWWIEFTKLKGITIQGSGTIEGRGSVWWSQPEPNDE 204
Query: 118 PLNQCHKNSDCQL-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 176
P+++ + + P +RF + T+TGI +S H+ C + + ++ +T+
Sbjct: 205 PISEELGSKMPSIKPAALRFYGSYNVTVTGITIQNSPQCHLKFDNCEAVHVYNMSVTSPG 264
Query: 177 DS----------SKDILVSE-----------------------VFCGPGQGISVGSLGKG 203
DS SKD+++ V CGPG GIS+G LG+
Sbjct: 265 DSLNTDGIHLQNSKDVVIHHCNLSCGDDCVSIQTGCNGVKIHNVNCGPGHGISIGGLGRD 324
Query: 204 IKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
V +TV++ T GVR+KTW G + F +I ++ V+ PIVIDQ YC
Sbjct: 325 NTKACVSNITVQDVNMYGTMTGVRIKTWQGGS-GSVQSIRFSNIRVSEVQTPIVIDQFYC 383
Query: 264 PYNKC 268
+ C
Sbjct: 384 DRSSC 388
>gi|118488018|gb|ABK95830.1| unknown [Populus trichocarpa]
Length = 516
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 135/329 (41%), Gaps = 87/329 (26%)
Query: 23 TNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKY--LVSFAEFEGP 80
++ NV DFGA +G +DD+KAF +W EA + + ++ P +Y LV F GP
Sbjct: 97 SSTTFNVLDFGAKGNGKSDDTKAFQAAWAEACK---VAASTMIVPAEYVFLVGPISFSGP 153
Query: 81 -CKASISFQL--------------QGLLDLFSIDTSLSL---AKGTFHGQGETAW----- 117
C+A+I FQL +GL + + +GT G G W
Sbjct: 154 YCQANIVFQLDGTIIAPTNSNVWGRGLFQWLEFTKLVGITIQGEGTIDGSGSVWWQDYPF 213
Query: 118 ------------PLN---QCHKNSDCQ----------LPTPIRFNFLNDSTITGIKSVDS 152
PLN Q H + PT +RF + T+TGI +S
Sbjct: 214 EDPIDNESEFIVPLNNTAQQHPPMPIRSELSGKMPSIKPTALRFYGSFNVTVTGITIQNS 273
Query: 153 RYFHINILGCYNLKLNDLKITAHADS----------SKDILVSE---------------- 186
H+ C + ++D++ ++ DS SKD+L+
Sbjct: 274 PQCHLKFDNCIGVVVHDMRTSSPGDSPNTDGIHLQNSKDVLIHSTDLACGDDCVSIQTGC 333
Query: 187 -------VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIA 239
V CGPG GIS+G LGK V +TVR+ T GVR+KTW G
Sbjct: 334 SNVYIHNVNCGPGHGISIGGLGKDNTKACVSNITVRDVVLHGTMTGVRIKTWQGGS-GSV 392
Query: 240 SNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
F +I ++ V+ PIVIDQ YC + C
Sbjct: 393 QGVLFSNIQVSEVQLPIVIDQFYCDKSIC 421
>gi|224127770|ref|XP_002329173.1| predicted protein [Populus trichocarpa]
gi|222870954|gb|EEF08085.1| predicted protein [Populus trichocarpa]
Length = 153
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 84/159 (52%), Gaps = 37/159 (23%)
Query: 192 GQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNN 251
GQG VGSLGK ++ V G+ V+NCT + T+NGVR+K+WP + G+ASN FEDIVMNN
Sbjct: 2 GQG--VGSLGKYPNEKPVSGIFVKNCTISDTTNGVRIKSWPALYGGVASNMHFEDIVMNN 59
Query: 252 VENPIVIDQLYCPYNKCNIKPKDSMP------------------------------NIEI 281
V+NP++IDQ YCP+N+C +K + +++
Sbjct: 60 VQNPVIIDQGYCPWNQCTLKAPSKVKISDVSFKSIRGTSATPVVVRIACSSGFPCQKVKL 119
Query: 282 GNRNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 320
N NL Y G G S CSNVKP + G + C
Sbjct: 120 ANINLAYRG-----PGGPAKSQCSNVKPIISGIMSASGC 153
>gi|359487384|ref|XP_003633583.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Vitis
vinifera]
Length = 427
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 146/321 (45%), Gaps = 67/321 (20%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG--KYLVSFAEFEGPCKA- 83
+NV++FG+ DG TDD K F +W E + + VLV P KY V F GPCK+
Sbjct: 45 VNVENFGSEGDGETDD-KVFKKAWEETSSSNT---AVLVVPKVKKYHVKPITFSGPCKSD 100
Query: 84 SISFQLQGLLD-----------------LFSIDTSLSLAKGTFHGQGETAWPLN--QCHK 124
S++ ++ G ++ ++I +GT G G W N + +K
Sbjct: 101 SVTLKILGTIEASDDPSDYAHDRSHWPLFYNIKNFQVEGEGTIDGNG-MIWXKNSYKINK 159
Query: 125 NSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA--------- 174
C + PT + F ++ + G+K +++ H++I N++ + T+
Sbjct: 160 TQPCTEAPTAVSFIQCDNLKVNGLKVQNAQEMHVSIEQSVNVEAFKIVTTSPQTSPNTXG 219
Query: 175 -HADSSKDILVSE-----------------------VFCGPGQGISVGSLGKGIKDEEVV 210
HA SS+++ + E V CGPG GISVG LG G + +V
Sbjct: 220 IHATSSENVQIIESVITTGDDCISIVNGSKNVEAIDVTCGPGHGISVGILGGGNSEAQVS 279
Query: 211 GLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNI 270
+ V T+ GVR+KTW + N F++I M NV+NPI+IDQ YC +
Sbjct: 280 NVLVDXAKLIGTTIGVRIKTWIRGSRNV-DNIVFQNIKMENVKNPIIIDQNYCD-QETPX 337
Query: 271 KPKDSMPNIEIGNRNLVYNGV 291
K ++S I RN+VY +
Sbjct: 338 KEQNSAVQI----RNIVYRNI 354
>gi|218188124|gb|EEC70551.1| hypothetical protein OsI_01700 [Oryza sativa Indica Group]
Length = 783
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 127/301 (42%), Gaps = 66/301 (21%)
Query: 26 VLNVKDFGAVADGIT--DDSKAFDTSWREAWNWDGIKGTVLVPP-GKYLVSFAEFEGPCK 82
V +V+ FGA +G + D++AF +W+ A + + TVLVP G + ++ F GPCK
Sbjct: 345 VFDVRAFGATGNGSSADGDTRAFRAAWKAACSAE--SATVLVPSDGVFTITSTIFAGPCK 402
Query: 83 ASISFQLQGLLD-------------------LFSIDTSLSLAKGTFHGQGETAWPLN-QC 122
++FQ+ G+L + D KGT G GE W L +
Sbjct: 403 PGLTFQIDGVLMPPDGPASWPAADGRRQWIVFYRADGMTLSGKGTIEGNGEEWWNLPCKP 462
Query: 123 HKNSD-------CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH 175
H+ + C+ P I+F +D ++ G++ +S FH+ GC + ++ L +++
Sbjct: 463 HRGPNGSTLPGPCESPALIKFVASSDVSVQGLRMENSPQFHLKFDGCSRVLVDGLVVSSP 522
Query: 176 ADSS---------------------------------KDILVSEVFCGPGQGISVGSLGK 202
A S + V V C G GIS+G LG
Sbjct: 523 ASSPNTDGVHVENTSSVRILNSRISNGDDCVSIGGGCSGVRVENVTCVHGHGISIGGLGA 582
Query: 203 GIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLY 262
V +TVR + NGVR+KTW G S F+ + M NV IVIDQ Y
Sbjct: 583 RGARACVSNVTVRGARVVDSDNGVRIKTW-QGGAGSVSGVVFDAVQMVNVRGCIVIDQYY 641
Query: 263 C 263
C
Sbjct: 642 C 642
>gi|163637657|gb|ABY27563.1| polygalacturonase [Mangifera indica]
Length = 75
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/74 (67%), Positives = 57/74 (77%)
Query: 190 GPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVM 249
GPG GIS+GSLGK ++ V G+TVRNCT T T NGVRVKTWP S G ASN F+DI+M
Sbjct: 1 GPGHGISIGSLGKYQNEQPVEGITVRNCTLTNTMNGVRVKTWPASPRGAASNLRFQDIIM 60
Query: 250 NNVENPIVIDQLYC 263
NNV NPI+IDQ YC
Sbjct: 61 NNVSNPIIIDQNYC 74
>gi|115436326|ref|NP_001042921.1| Os01g0329300 [Oryza sativa Japonica Group]
gi|53791330|dbj|BAD54709.1| putative polygalacturonase PG2 [Oryza sativa Japonica Group]
gi|113532452|dbj|BAF04835.1| Os01g0329300 [Oryza sativa Japonica Group]
Length = 759
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 127/301 (42%), Gaps = 66/301 (21%)
Query: 26 VLNVKDFGAVADGIT--DDSKAFDTSWREAWNWDGIKGTVLVPP-GKYLVSFAEFEGPCK 82
V +V+ FGA +G + D++AF +W+ A + + TVLVP G + ++ F GPCK
Sbjct: 345 VFDVRAFGATGNGSSADGDTRAFRAAWKAACSAE--SATVLVPSDGVFTITSTIFAGPCK 402
Query: 83 ASISFQLQGLLD-------------------LFSIDTSLSLAKGTFHGQGETAWPLN-QC 122
++FQ+ G+L + D KGT G GE W L +
Sbjct: 403 PGLTFQIDGVLMPPDGPASWPAADGRRQWIVFYRADGMTLSGKGTIEGNGEEWWNLPCKP 462
Query: 123 HKNSD-------CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH 175
H+ + C+ P I+F +D ++ G++ +S FH+ GC + ++ L +++
Sbjct: 463 HRGPNGSTLPGPCESPALIKFVASSDVSVQGLRMENSPQFHLKFDGCSRVLVDGLVVSSP 522
Query: 176 ADSS---------------------------------KDILVSEVFCGPGQGISVGSLGK 202
A S + V V C G GIS+G LG
Sbjct: 523 ASSPNTDGVHVENTSSVRILNSRISNGDDCVSIGGGCSGVRVENVTCVHGHGISIGGLGA 582
Query: 203 GIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLY 262
V +TVR + NGVR+KTW G S F+ + M NV IVIDQ Y
Sbjct: 583 RGARACVSNVTVRGARVVDSDNGVRIKTW-QGGAGSVSGVVFDAVQMVNVRGCIVIDQYY 641
Query: 263 C 263
C
Sbjct: 642 C 642
>gi|340034707|gb|AEK28685.1| pectin lyase superfamily protein [Populus tremula]
Length = 142
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 80/124 (64%), Gaps = 9/124 (7%)
Query: 190 GPGQGISVGSLGKGIKDEE---VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFED 246
GPG GISVGS+G E VVGLTV N TFT TSNG+R+KTW + G+AS FT+ED
Sbjct: 1 GPGHGISVGSMGGNTVIENKDIVVGLTVTNSTFTNTSNGLRIKTWASRYEGLASGFTYED 60
Query: 247 IVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNIEIGNRNLVYNGVNVKVEGPETTSL-CS 305
I+MN+VE+PI+IDQ YCP + C K + I+I +++ Y+ + + +L CS
Sbjct: 61 IIMNDVEHPIIIDQQYCPSSSCESK---TASRIQI--KDITYSNIRGTSKSKAAVTLNCS 115
Query: 306 NVKP 309
++ P
Sbjct: 116 SIVP 119
>gi|449484419|ref|XP_004156878.1| PREDICTED: probable polygalacturonase At3g15720-like [Cucumis
sativus]
Length = 415
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 132/292 (45%), Gaps = 61/292 (20%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPC-K 82
+ ++V +GA DG TDDS+AF +W+ + +LVP K +L++ +F+GPC
Sbjct: 46 KAIDVVQYGAAGDGKTDDSRAFLKAWKAVCEAN-TPSAMLVPSTKTFLLNPVQFQGPCMS 104
Query: 83 ASISFQLQGL------LD-----------LFSIDTSLSL-AKGTFHGQGETAWPLNQCHK 124
+S+ Q+ G LD LFS + L + G GQG W +
Sbjct: 105 SSVGVQILGKIVAPSDLDAWKDFDAKNWLLFSNVSRLVIQGNGEIDGQGAAWWD-----R 159
Query: 125 NSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------ 178
+SD + PT + + ++G+ +S H++I+ C + ++ L I A +S
Sbjct: 160 DSDGK-PTALAIYDCDGLHLSGLTHSNSPKSHMHIVRCNHASISKLNIVAPENSPNTDGI 218
Query: 179 ---------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVG 211
+ +I ++ + CGPG GIS+GSLGK V
Sbjct: 219 DVAHSSHVKIHNCNIGTGDDCIAISEGTSNIHIANIQCGPGHGISIGSLGKDGTSSSVED 278
Query: 212 LTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
+ V+NC T G R+KTW G A +F+ I ++ V PI+IDQ YC
Sbjct: 279 VRVQNCHLKGTMYGARIKTWQGG-AGYARKISFQGITLDQVHKPILIDQYYC 329
>gi|317106729|dbj|BAJ53225.1| JHL06P13.4 [Jatropha curcas]
Length = 380
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 126/272 (46%), Gaps = 47/272 (17%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKA-SI 85
NV +GAV DG DD++AF +W A + D ++VP K +LV+ F GPCK+ +I
Sbjct: 29 NVLSYGAVGDGNEDDTQAFVEAWNAACHCDEDTPRLVVPEDKTFLVNPINFLGPCKSGNI 88
Query: 86 SFQLQGLL---------------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHK 124
L G + D+ ++ + G G+GE W + H+
Sbjct: 89 EVVLSGTIIAPDGSNPWMENNVGRWLAFRDVHGLNIT---GDGMLDGRGERWWDFCKHHR 145
Query: 125 NSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA-------- 176
+ F+ D + GI + S HI I GC N+ L L I A A
Sbjct: 146 ------VKILGFSNCTDVHMRGINTARSGGGHIFIFGCENVDLAFLNIQAPATSPNTDGD 199
Query: 177 ------DSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKT 230
D + ++ ++ V CGPG GIS+GSLG + +V +T+R+ F T+NG R+KT
Sbjct: 200 DCISMVDRTYNVNITNVDCGPGHGISIGSLGANGEVVDVQNITIRDINFYGTTNGARIKT 259
Query: 231 WPDSHIGIASNFTFEDIVMNNVENPIVIDQLY 262
G + F +I + V+NPI+IDQ Y
Sbjct: 260 CRAGR-GRVQDVYFYNINVTEVKNPIIIDQHY 290
>gi|449469286|ref|XP_004152352.1| PREDICTED: probable polygalacturonase At3g15720-like [Cucumis
sativus]
Length = 415
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 132/292 (45%), Gaps = 61/292 (20%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPC-K 82
+ ++V +GA DG TDDS+AF +W+ + +LVP K +L++ +F+GPC
Sbjct: 46 KAIDVIQYGAAGDGKTDDSRAFLKAWKAVCEAN-TPSAMLVPSTKTFLLNPVQFQGPCMS 104
Query: 83 ASISFQLQGL------LD-----------LFSIDTSLSL-AKGTFHGQGETAWPLNQCHK 124
+S+ Q+ G LD LFS + L + G GQG W +
Sbjct: 105 SSVGVQILGKIVAPSDLDAWKVFDAKNWLLFSNVSRLVIQGNGEIDGQGAAWWD-----R 159
Query: 125 NSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------ 178
+SD + PT + + ++G+ +S H++I+ C + ++ L I A +S
Sbjct: 160 DSDGK-PTALAIYDCDGLHLSGLTHSNSPQSHMHIVRCNHASISKLNIVAPENSPNTDGI 218
Query: 179 ---------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVG 211
+ +I ++ + CGPG GIS+GSLGK V
Sbjct: 219 DVAHSSHVKIHNCNIGTGDDCIAISEGTSNIHIANIQCGPGHGISIGSLGKDGTSSSVED 278
Query: 212 LTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
+ V+NC T G R+KTW G A +F+ I ++ V PI+IDQ YC
Sbjct: 279 VRVQNCHLKGTMYGARIKTWQGG-AGYARKISFQGITLDQVHKPILIDQYYC 329
>gi|449441508|ref|XP_004138524.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
Length = 475
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 134/311 (43%), Gaps = 64/311 (20%)
Query: 19 GIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEF 77
G ++ V +V DFGAV DG TDD+ AF +W+ A + T+LVP + ++ F
Sbjct: 73 GNSTSDCVFDVTDFGAVGDGCTDDTAAFKAAWKAACAVE--SATLLVPSNLCFKITSTIF 130
Query: 78 EGPCKASISFQLQGLLD-------------------LFSIDTSLSLAKGTFHGQGETAWP 118
GPCK + F++ G L + +D GT G G+ W
Sbjct: 131 SGPCKPGLVFKVDGTLMPPDGPESWPKADSPRQWLVFYRLDQMTLTGSGTIEGNGQKWWE 190
Query: 119 LN-QCHKNSD-------CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
L + H+ + C P IRF ++ + ++ +S FH+ GC + + L
Sbjct: 191 LPCKPHRGPNGSTLPGPCDSPALIRFFMSSNLAVNSLRIQNSPMFHMKFDGCEGVLIEKL 250
Query: 171 KITA----------HADSSK-----------------------DILVSEVFCGPGQGISV 197
I++ H +++K ++ + V CGP GIS+
Sbjct: 251 SISSPKLSPNTDGIHIENTKGVGIYNSMISNGDDCISIGPGCANVAIEGVTCGPSHGISI 310
Query: 198 GSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIV 257
GSLG V +TVRN + NG+R+KTW G S+ FE+I M NV N I+
Sbjct: 311 GSLGVHNSQACVSNITVRNAVIRDSDNGLRIKTW-QGGSGSVSDILFENIQMENVRNCII 369
Query: 258 IDQLYCPYNKC 268
+DQ YC C
Sbjct: 370 VDQYYCLSKDC 380
>gi|359473233|ref|XP_003631273.1| PREDICTED: probable polygalacturonase At1g80170-like [Vitis
vinifera]
Length = 462
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 133/298 (44%), Gaps = 58/298 (19%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
++NV FGA DG+ DD++AF ++W +A + K +LVP G+ YLV+ F+GPC
Sbjct: 62 LVNVDAFGAAGDGVADDTQAFLSAWDKACS--TPKSVLLVPQGRSYLVNATRFKGPCADK 119
Query: 85 ISFQLQGLLDL-----------------FSIDTSLSLAKGTFHGQGETAWPLNQCHKNSD 127
+ Q+ G + FS + G + W + C +N
Sbjct: 120 LLIQIDGTIVAPDEPKNWDPKNPRNWLDFSKLKGVLFQGGGIIDGSGSKWWASSCKRNKS 179
Query: 128 --CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------ 178
C+ PT + + + + G+ +S+ H I ++++ D++++A DS
Sbjct: 180 NPCRGAPTALTIDSSSSVWVKGLTIQNSQQMHFTISRSQSVRIIDVQVSAPEDSPNTDGI 239
Query: 179 ---------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVG 211
S +I + ++CGPG GIS+GSLGK V
Sbjct: 240 HITDSTNVLLQNCKIGTGDDCISIVSGSSNIKMKTIYCGPGHGISIGSLGKDNSSGIVTK 299
Query: 212 LTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPY-NKC 268
+ + + T+NG+R+KTW G ++++ M +V NPI+IDQ YC N+C
Sbjct: 300 VVLDSAFLRGTTNGLRIKTWQGGS-GFVRAVRYQNVRMEDVANPILIDQFYCDSPNEC 356
>gi|297739065|emb|CBI28554.3| unnamed protein product [Vitis vinifera]
Length = 1125
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 134/299 (44%), Gaps = 60/299 (20%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
++NV FGA DG+ DD++AF ++W +A + K +LVP G+ YLV+ F+GPC
Sbjct: 711 LVNVDAFGAAGDGVADDTQAFLSAWDKACSTP--KSVLLVPQGRSYLVNATRFKGPCADK 768
Query: 85 ISFQLQGL------------------LDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNS 126
+ Q+ G LD FS + G + W + C +N
Sbjct: 769 LLIQIDGTIVAPDEPKNWDPKNPRNWLD-FSKLKGVLFQGGGIIDGSGSKWWASSCKRNK 827
Query: 127 D--CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----- 178
C+ PT + + + + G+ +S+ H I ++++ D++++A DS
Sbjct: 828 SNPCRGAPTALTIDSSSSVWVKGLTIQNSQQMHFTISRSQSVRIIDVQVSAPEDSPNTDG 887
Query: 179 ----------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVV 210
S +I + ++CGPG GIS+GSLGK V
Sbjct: 888 IHITDSTNVLLQNCKIGTGDDCISIVSGSSNIKMKTIYCGPGHGISIGSLGKDNSSGIVT 947
Query: 211 GLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPY-NKC 268
+ + + T+NG+R+KTW G ++++ M +V NPI+IDQ YC N+C
Sbjct: 948 KVVLDSAFLRGTTNGLRIKTWQGGS-GFVRAVRYQNVRMEDVANPILIDQFYCDSPNEC 1005
>gi|357128137|ref|XP_003565732.1| PREDICTED: polygalacturonase At1g48100-like [Brachypodium
distachyon]
Length = 653
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 129/311 (41%), Gaps = 71/311 (22%)
Query: 26 VLNVKDFGAVADGITD-------DSKAFDTSWREAWNWDGIKGTVLVPP-GKYLVSFAEF 77
V +V+ FGA G + D++AF +W+ A + T++VP G + ++ F
Sbjct: 238 VFDVRAFGASGSGNGNGNGSSSNDTRAFRAAWKAACSAG--SATLVVPSDGVFTITSTVF 295
Query: 78 EGPCKASISFQLQGLL-------------------DLFSIDTSLSLAKGTFHGQGETAWP 118
GPCK ++FQ+ G+L + D +GT G GE W
Sbjct: 296 AGPCKPGLTFQIDGVLMPPDGPASWPEADSRRQWVTFYKADGMTLNGRGTIEGNGEEWWN 355
Query: 119 LN-QCHKNSD-------CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
L + H+ + C P +RF N+ T+ G++ +S FH+ GC ++++ L
Sbjct: 356 LPCKPHRGPNGSTLRVPCDSPALVRFFASNNVTVQGLRIENSPQFHLKFDGCEQVRIDGL 415
Query: 171 KITAHADSS---------------------------------KDILVSEVFCGPGQGISV 197
I++ A S + + V CG G GIS+
Sbjct: 416 FISSPALSPNTDGVHVENTSSVQIYNSRINNGDDCISIGAGCSGVHIENVTCGHGHGISI 475
Query: 198 GSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIV 257
GSLG V +TVRN + NGVR+KTW G S F + M NV N IV
Sbjct: 476 GSLGVRNTRACVSNVTVRNARILDSDNGVRIKTW-QGGAGSVSAVEFVGVRMENVRNCIV 534
Query: 258 IDQLYCPYNKC 268
IDQ YC C
Sbjct: 535 IDQYYCTGGGC 545
>gi|225425613|ref|XP_002266099.1| PREDICTED: polygalacturonase At1g48100 [Vitis vinifera]
gi|297739091|emb|CBI28580.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 129/303 (42%), Gaps = 61/303 (20%)
Query: 24 NRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGPCK 82
+R+ +V FGA DGI+DDSKA +W A G T+ +P K+L+ +GPC
Sbjct: 79 SRIFDVLSFGAKGDGISDDSKALLAAWGAACKVPG--ATLEIPSEFKFLIEPITLQGPCM 136
Query: 83 ASISFQLQGLL------------DLFS------IDTSLSLAKGTFHGQGETAWPLNQCH- 123
+ Q+ G L LF + GT GQG W L+Q H
Sbjct: 137 PRLVLQIDGTLLAPPKVASWPKSSLFQWINFKWLHNFTIQGTGTVDGQGSNWWSLSQIHY 196
Query: 124 -----KNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA---- 174
K+ PT +RF D T+ I+ ++S H+ + + ++ I++
Sbjct: 197 IQKRSKDIPNMKPTALRFYASYDVTVCNIRIINSPQCHLKFDYSGRVNVTNITISSPENS 256
Query: 175 ------HADSSKD-----------------------ILVSEVFCGPGQGISVGSLGKGIK 205
H +++D + V + CGPG GIS+G LGK
Sbjct: 257 PNTDGIHLQNTQDVEIQHSNIGCGDDCVSIQTGCSNVHVHHINCGPGHGISLGGLGKEKS 316
Query: 206 DEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPY 265
V L V N + GVR+KTW IG N +F +I +++V+ PI+IDQ YC
Sbjct: 317 AACVSNLVVDNISVQNALYGVRIKTWQGG-IGSVKNVSFSNIQVSDVKVPIMIDQYYCDK 375
Query: 266 NKC 268
+ C
Sbjct: 376 HIC 378
>gi|22329091|ref|NP_194963.2| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|332660647|gb|AEE86047.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 342
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 136/315 (43%), Gaps = 66/315 (20%)
Query: 7 FSLLVSFITSVRGIDATNRVLNVKDFGAVADG-ITDDSKAFDTSWREAWNWDGIKGTVLV 65
FSL++ I+ R+L++KDF + I D S+AF +W+ + G+ LV
Sbjct: 15 FSLII-VISYYFEYGEGQRILSIKDFIIDTNHTIIDYSQAFQEAWKGLCEDETPNGSALV 73
Query: 66 --PPGKYLVSFAEFEGPCKAS-ISFQLQGLLD------------------LFSIDTSLSL 104
Y + + F GPC +S I Q+ G L+ ++ +
Sbjct: 74 IRKNETYTLQPSTFRGPCVSSNIHIQIDGKLEGPRKPIYWKNKENRSWLGFKDVEGLVIN 133
Query: 105 AKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYN 164
G + GE W K PT I F D G+ ++S HI+I GC N
Sbjct: 134 GSGVLNPHGEAWWKSVSLSKR-----PTTISFASCMDIVYNGLHHINSPRNHISIYGCTN 188
Query: 165 LKLNDLKITAHADS------------------------------------SKDILVSEVF 188
L++L I+A DS S DI ++ V
Sbjct: 189 ATLSNLDISAPEDSPNTDGINICLSHRIQILDSSIQTGDDCVAITGGRGGSSDINITGVA 248
Query: 189 CGPGQGISVGSLGK-GIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDI 247
CGPG GIS+GSLGK +D+ V + VR+C+FT T NG R+KTW G+A N +E+I
Sbjct: 249 CGPGHGISIGSLGKDNERDDIVENVNVRSCSFTGTQNGARIKTWNGGR-GLAKNILYENI 307
Query: 248 VMNNVENPIVIDQLY 262
+ + PI+I+Q Y
Sbjct: 308 TLIDAGYPIIINQHY 322
>gi|15241590|ref|NP_199296.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|9758387|dbj|BAB08836.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332007783|gb|AED95166.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 332
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 115/263 (43%), Gaps = 68/263 (25%)
Query: 62 TVLVPPGK-YLVSFAEFEGPCKA-SISFQLQG---------------LLDLFSIDTSLSL 104
T L+P + +L+ F+GPCK+ S+ + G L S + L
Sbjct: 10 TFLIPSNQTFLLQPLTFQGPCKSPSVQVKFDGKIVAPINKAAWSESKLFRWVSFKEIIGL 69
Query: 105 ---AKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILG 161
GT HG+G + W Q H F ND I GI S +S HI+I
Sbjct: 70 TVNGSGTIHGRGSSFWK--QLH------------FQRCNDLKIIGITSFNSPRNHISISE 115
Query: 162 CYNLKLNDLKITAHADS----------SKDILVSEVF----------------------- 188
C ++L +K+ A DS S D+ V + F
Sbjct: 116 CKRVQLTKIKLVAPEDSPNTDGINISGSSDVDVYDTFIGTGDDCVAINNGSVNINITRMN 175
Query: 189 CGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIV 248
CGPG GISVGSLG+ ++ V + V NCTF T NGVR+KTWP+ G A N F+D+
Sbjct: 176 CGPGHGISVGSLGRDGEESIVENVQVTNCTFFRTDNGVRIKTWPNGK-GYARNILFKDLT 234
Query: 249 MNNVENPIVIDQLYCPYNKCNIK 271
+NPI+IDQ Y + +++
Sbjct: 235 FRESKNPIIIDQNYVDKGRLDVE 257
>gi|168032270|ref|XP_001768642.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680141|gb|EDQ66580.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 424
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 123/303 (40%), Gaps = 62/303 (20%)
Query: 20 IDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFE 78
+ V NV GAV DG TDD +AF +W A VLVP G K+ + F
Sbjct: 17 VHGIGEVFNVMMEGAVGDGRTDDGEAFQRAWLHACRIP--SAVVLVPAGRKFSLRPIVFA 74
Query: 79 GPCKASISFQLQGL-----------------LDLFSIDTSLSLAKGTFHGQGETAW---- 117
GPC + + +++G L+ ++ + G +G+G W
Sbjct: 75 GPCASKLQLKVEGTIVAMEGPGSGTGDHKAWLEFKNLRDFALVGNGVINGKGRRWWSQVC 134
Query: 118 -PLNQCHKNSDCQLPTP---IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKIT 173
P + + C+ + F + ++ ++ DS FH+ C ++ L IT
Sbjct: 135 RPTMKVSGKTWCRNRKEFYGLVFQNCVNVRVSNLRIRDSPKFHLTFTNCDGVRATGLLIT 194
Query: 174 AHADS---------------------------------SKDILVSEVFCGPGQGISVGSL 200
A +S S +L+ ++ CGPG GISVGSL
Sbjct: 195 APRNSPNTDGIHLKDCQNVFILNCRIRTGDDCVSIQTGSSLVLIEDIECGPGHGISVGSL 254
Query: 201 GKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQ 260
GK V G+ V TF T+NG R+K+W G A F + MN VE P+VIDQ
Sbjct: 255 GKSRSKACVWGIKVDRATFDRTTNGFRIKSWQGGS-GHAHGIMFLNAKMNKVEKPVVIDQ 313
Query: 261 LYC 263
YC
Sbjct: 314 YYC 316
>gi|357457907|ref|XP_003599234.1| Polygalacturonase [Medicago truncatula]
gi|355488282|gb|AES69485.1| Polygalacturonase [Medicago truncatula]
Length = 437
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 146/316 (46%), Gaps = 64/316 (20%)
Query: 23 TNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK--YLVSFAEFEGP 80
++ +NV D+GA ++ D++AF+ +W EA + G VLV P + Y ++ F GP
Sbjct: 66 SHNTVNVNDYGAKSNDGQVDNEAFEMAWNEACS----NGKVLVVPKQSVYHLNPITFSGP 121
Query: 81 CKASISFQLQGLL------DLFSIDTSLSL-----------AKGTFHGQGETAWPLNQCH 123
C+ + + ++ G + + D L + GT +G G W N C
Sbjct: 122 CQPNTALKIYGTIKAWPRISAYGADRKLWIKFENVTNLIVDGGGTINGNGRIWWE-NSCK 180
Query: 124 KNSD--CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-- 178
N C+ PT + F+ N+ + I+ +++ H+ I GC N+ ++L +TA S
Sbjct: 181 VNESLPCKGAPTAVTFDECNNLKVDKIRFRNAQQMHLRIQGCNNVWASNLIVTAPGHSPN 240
Query: 179 -------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDE 207
SK++ +++ CGPG GIS+GSLG G
Sbjct: 241 TDGIHITHSQNVFITNSTIGTGDDCISIVSGSKNVRATDITCGPGHGISIGSLGGGNTQA 300
Query: 208 EVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
EV + V T T+NGVR+KTW G A N F +IV+ NV NPI+IDQ YC K
Sbjct: 301 EVSNVEVNRATLIGTTNGVRIKTWQGGS-GYARNIKFINIVVRNVTNPIIIDQKYCDQKK 359
Query: 268 CNIKPKDSMPNIEIGN 283
K ++ +E+ N
Sbjct: 360 ---KCQEQNSAVELSN 372
>gi|297802790|ref|XP_002869279.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315115|gb|EFH45538.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 134/305 (43%), Gaps = 67/305 (21%)
Query: 24 NRVLNVKDFGAVADG-ITDDSKAFDTSWREAWNWDGIKGTVLV--PPGKYLVSFAEFEGP 80
++L++KDF + I D S+AF +W+ + G+ LV Y + F GP
Sbjct: 24 QKILSIKDFILKTNHTIIDYSQAFHEAWKGLCEDETPNGSALVIRKNETYTLQPLIFRGP 83
Query: 81 CKAS-ISFQLQGLLD------------------LFSIDTSLSLAKGTFHGQGETAWPLNQ 121
C +S I Q+ G L+ ++ + G + GE W
Sbjct: 84 CVSSKIHIQIDGKLEGPRKPIYWKNTEKKSWLGFRDVEGLVINGSGVLNPHGEAWWK--- 140
Query: 122 CHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--- 178
S + PT I F D G+ ++S HI+I GC N L++L I+A DS
Sbjct: 141 --SVSHSKRPTTISFESCTDIIYNGLTQINSPKNHISIYGCTNATLSNLDISAPEDSPNT 198
Query: 179 ---------------------------------SKDILVSEVFCGPGQGISVGSLGKGIK 205
S DI ++ V CGPG GIS+GSLGK +
Sbjct: 199 DGINICLSHKIQILDSSIQTGDDCVAITGGRGGSSDINITGVACGPGHGISIGSLGKDDE 258
Query: 206 DEEVV-GLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
+++V + VR+C+FT T NG R+KTW G+A N +E+I + + PI+I+Q Y
Sbjct: 259 TDDIVENVIVRSCSFTGTQNGARIKTWQGGQ-GLAKNILYENITLIDAGYPIIINQHY-- 315
Query: 265 YNKCN 269
++K N
Sbjct: 316 FDKSN 320
>gi|357135651|ref|XP_003569422.1| PREDICTED: polygalacturonase At1g48100-like [Brachypodium
distachyon]
Length = 544
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 97/308 (31%), Positives = 135/308 (43%), Gaps = 68/308 (22%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGP-CKA 83
V NV DFGA DG++DD+KAF +W A TVLVP ++LV F GP CK
Sbjct: 144 VFNVVDFGAKGDGVSDDTKAFQAAWAAACKQG--SSTVLVPSELEFLVGPISFSGPYCKP 201
Query: 84 SISFQLQG--------------LLDL--FSIDTSLSL-AKGTFHGQGETAW--------- 117
+I FQL+G LL F+ LS+ G +G+G+ W
Sbjct: 202 NILFQLEGTILAPTNAKAWGSGLLQWLEFTKLNGLSIQGSGVINGRGQQWWTYSDPNDDE 261
Query: 118 ----PLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKIT 173
NQ + PT +RF + + GI V+S H+ C + ++DL I+
Sbjct: 262 DDDTQYNQELERMPQVKPTALRFYGSFNVVVAGITIVNSSQCHLKFDNCQGVLVHDLTIS 321
Query: 174 A----------HADSSKD-----------------------ILVSEVFCGPGQGISVGSL 200
+ H +SKD I + V CGPG GIS+G L
Sbjct: 322 SPENSLNTDGIHLQNSKDVSIHHTNLACGDDCISIQTGCSNIYIHNVNCGPGHGISIGGL 381
Query: 201 GKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQ 260
G+ V +TVR+ T GVR+KTW IG+ + F +I ++ V+ PI+IDQ
Sbjct: 382 GRDNTKACVSNVTVRDVNMFRTMTGVRIKTW-QGGIGLVQDVRFSNIQVSEVQTPIMIDQ 440
Query: 261 LYCPYNKC 268
YC C
Sbjct: 441 FYCDKRTC 448
>gi|449498572|ref|XP_004160574.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 227
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 103/226 (45%), Gaps = 61/226 (26%)
Query: 155 FHINILGCYNLKLNDLKITA----------HADSSK-----------------------D 181
FH ++ CYN ++KITA H +SK +
Sbjct: 3 FHTSVFYCYNFTATNMKITAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHSTEN 62
Query: 182 ILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASN 241
I V+ V CGPG G+SVGSLGK K++ V + V+NCT +NG R+KTW G+AS
Sbjct: 63 ITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPISGLASR 122
Query: 242 FTFEDIVMNNVENPIVIDQLY-------CPYNKCNIKPKD----SMPN------------ 278
FEDIVM V+NPI+IDQ Y + N++ K+ S N
Sbjct: 123 IIFEDIVMYGVKNPIIIDQTYGTKKSEESNWKVSNVQFKNIRGTSTTNVAVLLECSKLFP 182
Query: 279 ---IEIGNRNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 321
+E+ + NL Y G N++ S CSN K FG Q P CV
Sbjct: 183 CEGVELRDINLSYGGSNLR--NSTIVSSCSNAKIATFGVQNPPPCV 226
>gi|302801658|ref|XP_002982585.1| hypothetical protein SELMODRAFT_116909 [Selaginella moellendorffii]
gi|300149684|gb|EFJ16338.1| hypothetical protein SELMODRAFT_116909 [Selaginella moellendorffii]
Length = 420
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 152/379 (40%), Gaps = 106/379 (27%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK---------GTVLVPPGK-YLVSFA 75
V +V +GA DG TDD+KA +W A + G VLVP G+ +++S
Sbjct: 20 VSSVVSYGARGDGRTDDTKALLDAWNAACSGGGASRRYGSSSYASMVLVPGGRTFVISPV 79
Query: 76 EFEGPCKASISFQLQGLL--------------DLFSIDTSLSL---AKGTFHGQGETAWP 118
+ GPCK+ I+ Q+ G L D I L G G+G+ WP
Sbjct: 80 QLRGPCKSLITLQVAGNLVASTRFLTSDETTRDWIVIRKVSGLTIQGGGVLDGRGKQWWP 139
Query: 119 -------LNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLK 171
CH+ PT + + + G+ V+S+ H +I N+ +L
Sbjct: 140 KSCKFDSTQPCHR-----APTSLVLHDSERVLVDGLTLVNSQQIHFSIFHSSNVTATNLI 194
Query: 172 ITA----------HADSSK---------------------------------------DI 182
++A H SK +
Sbjct: 195 VSAARKSPNTDGVHVQGSKFVNLGTITIDTGMPASLSFFLSFPFSLWDDCISIGANTSHV 254
Query: 183 LVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDS-HIGIASN 241
+ ++ CG G GIS+GSLG V +++ T+NG+R+KTWP S G+A+
Sbjct: 255 SMRDITCGAGHGISIGSLGNYKSAAFVSNISLDGALLANTTNGLRIKTWPASGGAGLATG 314
Query: 242 FTFEDIVMNNVENPIVIDQLYCPYNKCNIKPK--DSMPNIEIGNRNLVYN---------- 289
+F ++ M+NV+NPI+IDQ YC P+ D +E+ R++VY
Sbjct: 315 ISFRNVQMDNVKNPIIIDQFYCDMES---SPQGCDHGSGVEV--RDVVYENISGSSATPV 369
Query: 290 GVNVKVEGPETTSLCSNVK 308
GV + P T + SN++
Sbjct: 370 GVKLNCNHPCTEIVMSNIR 388
>gi|242057705|ref|XP_002457998.1| hypothetical protein SORBIDRAFT_03g025260 [Sorghum bicolor]
gi|241929973|gb|EES03118.1| hypothetical protein SORBIDRAFT_03g025260 [Sorghum bicolor]
Length = 420
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 124/291 (42%), Gaps = 62/291 (21%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGPCKASI 85
L+V FGA ADG+TDD++A +WR A + TVL+P G ++L+S +GPC +
Sbjct: 31 LSVLSFGAAADGVTDDAEALVAAWRVACRVP--RATVLLPSGHRFLLSPVTLQGPCSTKL 88
Query: 86 SFQ----LQGL----LDLFSIDTSLSLAKGTFHGQGETAW-----PLNQC-------HKN 125
+ Q LQ L L FSI L GT GQ T+ P N H +
Sbjct: 89 TLQPRRPLQWLNFKWLQDFSI-----LGAGTVDGQSITSLQSASSPANNSTSQTSTGHWH 143
Query: 126 SDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSS------ 179
S PT IRF + T+ I+ +S H+ +K+ ++ I++ DS
Sbjct: 144 SPGVKPTLIRFYNSFNVTVRNIRITNSPQCHLKFDSSGGIKVKNITISSPGDSPNTDGIH 203
Query: 180 ---------------------------KDILVSEVFCGPGQGISVGSLGKGIKDEEVVGL 212
++ + V C PG GIS+G LGK V +
Sbjct: 204 LQNTRDVEIKSSTIGCGDDCVSIQTGCSNVHIKNVVCNPGHGISLGGLGKDYSLACVSDV 263
Query: 213 TVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
N GVR+KTW +G N TF ++ + NV PI IDQ YC
Sbjct: 264 VAENIIVQNALYGVRIKTW-QGGVGSVRNITFSNVRVANVATPIAIDQFYC 313
>gi|4056431|gb|AAC98004.1| Similar to gb|AJ002532 endo-polygalacturonase from Arabidopsis
thaliana and is a member of the polygalacturonase family
PF|00295 [Arabidopsis thaliana]
Length = 457
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 132/294 (44%), Gaps = 63/294 (21%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
++NV FGA DG++DD++AF ++W +A + K LVP G+ YLV+ +F GPC+
Sbjct: 65 LVNVDTFGAAGDGVSDDTQAFVSAWSKACSTS--KSVFLVPEGRRYLVNATKFNGPCEQK 122
Query: 85 ISFQLQGLLDLFSIDTSL--------------------SLAKGT-FHGQG-----ETAWP 118
+ Q++ L SID ++ S KG F G+G + W
Sbjct: 123 LIIQVK----LSSIDGTIVAPDEPSNWDSKFQRIWLEFSKLKGVVFQGKGVIDGSGSKWW 178
Query: 119 LNQCHKN---------------SDCQLPTPIRFNFL---NDSTITGIKSVDS-----RYF 155
C KN S + + NF+ +DS V S
Sbjct: 179 AASCKKNKSNALTIESSSGVKVSGLTIQNSQQMNFIIARSDSVRVSKVMVSSPGDSPNTD 238
Query: 156 HINILGCYNLKLNDLKITAHAD------SSKDILVSEVFCGPGQGISVGSLGKGIKDEEV 209
I+I G N+ L D KI D +S +I + ++CGPG GIS+GSLGK V
Sbjct: 239 GIHITGSTNVILQDCKIGTGDDCVSIVNASSNIKMKNIYCGPGHGISIGSLGKDNTTGIV 298
Query: 210 VGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
+ + T+NG+R+KT+ G F ++ M +V NPI+IDQ YC
Sbjct: 299 TQVVLDTALLRETTNGLRIKTYQGGS-GYVQGIRFTNVEMQDVANPILIDQFYC 351
>gi|22329093|ref|NP_680757.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|332660648|gb|AEE86048.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 486
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 142/320 (44%), Gaps = 75/320 (23%)
Query: 49 SWREAWNW---DGIKGT----VLVPPGKYLVSFAEFEGPCKA-SISFQLQGLLDL----- 95
+++EAWN + GT V+ Y+V F+GPC + +I Q+ G L+
Sbjct: 5 AFKEAWNALCEANVNGTTTSLVINANETYIVQPQLFQGPCASRNIHIQIDGKLEAPKMVR 64
Query: 96 ------------FSIDTSLSL-AKGTFHGQGETAWP-LNQCHKNSDCQLPTPIRFNFLND 141
F+ L L G H GE W + H+ P I F+ ++
Sbjct: 65 EWGNYESKCWLCFTNVKGLVLNGSGILHPHGEAWWSSIEHSHR------PRTIGFSGSSN 118
Query: 142 STITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----------------------- 178
G+ ++S HI+IL C N+ L++ + A DS
Sbjct: 119 ILYNGLTQMNSPKNHISILDCTNVTLSNFHLIAPKDSPNTDGIDIAHSNNIRIFNSSIQT 178
Query: 179 ----------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRV 228
S DI ++ V CGPG GIS+GSLG+ ++ V + +R+C+F T NG R+
Sbjct: 179 GDDCIAINGGSYDINITHVACGPGHGISIGSLGRYSVNDTVQNVKIRHCSFNGTENGARI 238
Query: 229 KTWP-DSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNIEIGNRNLV 287
KTW +G+A N +E+I + + + PI+IDQ YC N + K++M +++ N
Sbjct: 239 KTWTVRGGLGVAKNILYENITLTDTKYPIIIDQHYC--NGGHNCTKEAMTAVKVSNVTFR 296
Query: 288 Y------NGVNVKVEGPETT 301
Y N + +K++ E T
Sbjct: 297 YFTGTCANDIAIKLDCDEVT 316
>gi|224115434|ref|XP_002332134.1| predicted protein [Populus trichocarpa]
gi|222875184|gb|EEF12315.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 146/345 (42%), Gaps = 58/345 (16%)
Query: 21 DATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGP 80
+AT R NV D+GA +G D + AF +W + T+ V G S EG
Sbjct: 12 EATGRRFNVLDYGADGNGKIDATPAFQKAWADFCQASEAMPTLEVTAGNTFSS--NIEGT 69
Query: 81 CKASISF-QLQGLLDL-----FSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPTPI 134
A SF G D F+ L + G AW C+ +
Sbjct: 70 IGAPNSFDSWDGDGDYEKWIGFTASVGLIVDGGGRFDGRGEAW-WKACN---------AL 119
Query: 135 RFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---------------- 178
FN N ++ + V+S+ HI I C ++++++L+I A +S
Sbjct: 120 HFNKCNGLRLSNLHHVNSQKGHICINACDDVEVSNLQILAPDESPNTDGIDISESNHVNI 179
Query: 179 -----------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTC 221
S I V+ V CGPG GIS+GSLGK E V + V++C F
Sbjct: 180 HDSFIGTGDDCIAINGFSTSINVTGVKCGPGHGISIGSLGKDGAYETVEDVHVKSCAFKG 239
Query: 222 TSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP---YNKCNIKPKD-SMP 277
T NGVR+KTW ++ G TFEDI N ENPI+IDQ Y P IK D +
Sbjct: 240 TQNGVRIKTW-ETGSGYVRKITFEDITFVNSENPIIIDQQYNPNGNRGGSGIKISDVTYR 298
Query: 278 NIEIGNRNLVYNGVNVKVEGPETTSLCSNVKPTLF--GKQIPATC 320
N+ + + V +N + T + NVK T GKQI A+C
Sbjct: 299 NVRGSSADEVAIALNCAGKAACTNIVMDNVKITSSNPGKQIRASC 343
>gi|357128629|ref|XP_003565973.1| PREDICTED: probable polygalacturonase At1g80170-like [Brachypodium
distachyon]
Length = 429
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 129/317 (40%), Gaps = 65/317 (20%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVL-VPPGK-YLVSFAEFEGPCKA 83
+L+V DFGAV DGI DD++A +W A + TVL VP G+ Y V GPC+
Sbjct: 28 LLSVDDFGAVGDGIADDTQALLDAWNAACA--TLDKTVLNVPAGRSYQVWPVTLAGPCRE 85
Query: 84 SISFQLQG------------------LLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKN 125
I + G L + + G G+G+ W + K+
Sbjct: 86 EIKLFISGNIVAPESPDEWERRDGEKWLHFYRVQDLSVSGGGVIDGRGQQWWEQSCKGKH 145
Query: 126 SDCQLPTP------IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----- 174
Q TP + F + + G+ +S+ H+ C N + + L++++
Sbjct: 146 HALQHCTPQAAPKALHFEECHGVRVQGVTVQNSQQQHLTFTRCTNARASFLRVSSPESSP 205
Query: 175 -----HADSSK-----------------------DILVSEVFCGPGQGISVGSLGKGIKD 206
H SK D+ + + CGPG GIS+G++G+
Sbjct: 206 ATDGIHLVDSKNVQLADNLISTGGDCVSMVGNCTDVRLRSISCGPGSGISIGTIGETPAA 265
Query: 207 EEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC--- 263
+ + + + T TSNGVR+KTW D G A F+ I M NV NPIVIDQ
Sbjct: 266 DRLEKIKIDTVFMTNTSNGVRIKTWQDG-CGYARKVKFQSIAMKNVSNPIVIDQYRTSSH 324
Query: 264 PYNKCNIKPKDSMPNIE 280
P C P S +E
Sbjct: 325 PAVPCGSTPGMSAVAVE 341
>gi|383100775|emb|CCG48006.1| polygalacturonase, putative, expressed [Triticum aestivum]
Length = 441
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 153/389 (39%), Gaps = 102/389 (26%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
+L++ DFGAV DGI +D++AF +W+ A G + VP GK Y + GPC+
Sbjct: 31 LLSLDDFGAVGDGIANDTQAFVDAWKAACATGGTT-YLNVPAGKSYQIWPVTLAGPCRGE 89
Query: 85 ISFQL-----------------QGLLDLFSIDTSLSLAKGTF-HGQGETAWPLNQCHKNS 126
I + QG F LSL+ G G+G+ W C ++
Sbjct: 90 IKLMISGNIIAPEDPEDWSDGDQGRWLHFRGVGDLSLSGGGIVDGRGQQWWA-GSC-EDE 147
Query: 127 DCQ-------LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH---- 175
+C P + F D ++ GI +S+ H+ C++++ L++T+
Sbjct: 148 NCTSYRPYEVAPMALHFEDCRDVSVKGITVQNSQRQHLVFTRCHDVEAYYLRVTSPEYSH 207
Query: 176 -----------------------------ADSSKDILVSEVFCGPGQGISVGSLGKGIKD 206
A +S DI + + CGPG GIS G LG+ +
Sbjct: 208 GTVGVLVVSSTDVHIKHDLFSVGGDCVSIAGNSSDIRLRAISCGPGLGISTGGLGENQSN 267
Query: 207 EEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYN 266
+ + + + N + T NG+R+KT+ + G A F I M NV NPIVIDQ Y N
Sbjct: 268 DRIHKIKMDNMLLSNTKNGLRIKTYENG-CGYARKVKFAHITMRNVANPIVIDQHYSASN 326
Query: 267 KCNIKP---------------------------------KDSMPNIEIGNRNLVYNGVNV 293
P D+MP ++L +GVN+
Sbjct: 327 SNRGTPCGTPNGSVVAVEKIKYIDITGTSATERAVTFACSDAMP-----CKHLYLDGVNL 381
Query: 294 KVEGPETTS-LCSNVKPTLFGKQIPATCV 321
K G +TS C G +P +C+
Sbjct: 382 KTAGGGSTSAYCHQAFGKHVGDVLPVSCL 410
>gi|357485855|ref|XP_003613215.1| Polygalacturonase [Medicago truncatula]
gi|355514550|gb|AES96173.1| Polygalacturonase [Medicago truncatula]
Length = 543
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 129/332 (38%), Gaps = 94/332 (28%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYL--VSFAEFEGP-CKA 83
NV D+GA DG TDD+KAF +W ++ + +V P Y+ V F GP CKA
Sbjct: 121 FNVLDYGAKGDGNTDDTKAFQATWAATCK---VEASTMVIPANYIFYVGPISFSGPYCKA 177
Query: 84 SISFQLQGLLDLFSIDTS-----------------LSLAK---------GTFHGQGETAW 117
+I FQ + +D + L K G G+G W
Sbjct: 178 NIVFQANNKVIFCQLDGTIIAPTNPNAWSGVTLQWLEFTKLEGITIQGNGVIDGRGSVWW 237
Query: 118 -----------------PLNQCHK-----------NSDCQLPTPIRFNFLNDSTITGIKS 149
PLNQ K PT +RF T+TGI
Sbjct: 238 QDFPYDNPIDDEEKLIVPLNQTQKPPMPVQNEMGRKMPSNKPTALRFYGSYGPTVTGITI 297
Query: 150 VDSRYFHINILGCYNLKLNDLKITAHADS----------SKDIL---------------- 183
+S H+ C + ++D+ I++ DS SKD+L
Sbjct: 298 QNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHLQNSKDVLIHSSKLACGDDCISIQ 357
Query: 184 -------VSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHI 236
V V CGPG GIS+GSLGK V +TVR+ + NGVR+KTW
Sbjct: 358 TGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDVNIHDSMNGVRIKTW-QGGS 416
Query: 237 GIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
G F +I ++ V+ PIVIDQ YC C
Sbjct: 417 GSVQGVLFSNIQVSEVQLPIVIDQFYCDKRVC 448
>gi|242091477|ref|XP_002441571.1| hypothetical protein SORBIDRAFT_09g029500 [Sorghum bicolor]
gi|241946856|gb|EES20001.1| hypothetical protein SORBIDRAFT_09g029500 [Sorghum bicolor]
Length = 537
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 137/311 (44%), Gaps = 67/311 (21%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPP-GKYLVSFAEFEGP 80
+ + V NV DFGA DG+TDD++AF+ +W A + TVLVP +++V F GP
Sbjct: 134 SQDTVFNVVDFGAKGDGVTDDTQAFEAAWAAACKVEA--STVLVPSEHEFVVGPISFSGP 191
Query: 81 -CKASISFQL--------------QGLLDLFSIDTSLSLA---KGTFHGQGETAWPLNQC 122
CK +I FQL GLL +A G +G+G+ W +
Sbjct: 192 YCKPNILFQLDGTILAQTSARVWGSGLLQWLEFTKLTGIAIQGSGVINGRGQQWWTYSDP 251
Query: 123 HKNSDCQL------------PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
+ + + PT +RF ++ T+TGI V+S H+ C + ++DL
Sbjct: 252 NDDDNDDAYYVELDKMPQIKPTALRFYGSSNVTVTGITIVNSSQCHLKFDSCQGVMVHDL 311
Query: 171 KITA----------HADSSK-----------------------DILVSEVFCGPGQGISV 197
I++ H +SK D+ + V CGPG GIS+
Sbjct: 312 TISSPEHSPNTDGIHLQNSKEVSIHHTNLACGDDCVSIQTGCSDVNIHNVNCGPGHGISI 371
Query: 198 GSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIV 257
G LG+ V +TVR+ T GVR+KTW G+ F +I ++ V+ PI+
Sbjct: 372 GGLGRYNTKACVSNITVRDVKMFRTMTGVRIKTWQGGS-GLVQGIRFSNIQVSEVQTPII 430
Query: 258 IDQLYCPYNKC 268
IDQ YC C
Sbjct: 431 IDQFYCDKTTC 441
>gi|255576392|ref|XP_002529088.1| conserved hypothetical protein [Ricinus communis]
gi|223531439|gb|EEF33272.1| conserved hypothetical protein [Ricinus communis]
Length = 307
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 124/265 (46%), Gaps = 47/265 (17%)
Query: 9 LLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG 68
+LV + + T+ NV +GA DG TD +KAF T+W +A + VPPG
Sbjct: 6 ILVFYFIFITSPLVTSAQFNVLSYGANPDGRTDCTKAFLTAWTQACA-STRPAIISVPPG 64
Query: 69 KYLVSFAEFEGPCKASISFQLQGLLDLFSIDTSLSLAKGTFHGQGETA-WPLNQCHKNSD 127
++LVS F+GPCK + L S+D S +A + G W
Sbjct: 65 RFLVSKLLFQGPCKNNAV--------LLSVDGSTLVAPSDYWATGNAQNW---------- 106
Query: 128 CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-----SKDI 182
+ F +++ TI+G +D + + ++ K + K A S S +I
Sbjct: 107 ------LIFEYVDGVTISG-GILDGQGMSL-----WSCKASGKKCPTGATSLGFSNSNNI 154
Query: 183 LVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNF 242
+ I +GSLGK +++ V +TV+ FT T NG+R+K+W G A N
Sbjct: 155 AI----------IGIGSLGKDLQEAGVQNVTVKTAKFTGTQNGLRIKSWGRPSNGFARNI 204
Query: 243 TFEDIVMNNVENPIVIDQLYCPYNK 267
F+ M +V+NPIVIDQ YCP+NK
Sbjct: 205 LFQHATMIDVKNPIVIDQNYCPHNK 229
>gi|194690040|gb|ACF79104.1| unknown [Zea mays]
Length = 496
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 132/305 (43%), Gaps = 64/305 (20%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGP-CKA 83
V +V +FGA DG+TDD++AF+ +W A + TVLVP G +++V F GP CK
Sbjct: 97 VFSVVEFGAKGDGVTDDTQAFEAAWAAACKVE--ASTVLVPSGLEFVVGPISFSGPYCKP 154
Query: 84 SISFQLQ---------------GLLDLFSIDTSLSLA---KGTFHGQGETAWPLNQCHKN 125
+I FQL GLL +A G +G+G+ W +
Sbjct: 155 NILFQLDGTILAQTSARAWGSAGLLQWLEFTKLTGIAVQGSGVINGRGQDWWTYADPNDA 214
Query: 126 SDCQL--------PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD 177
D + PT +RF ++ T+ GI V+S H+ C + ++DL +++ D
Sbjct: 215 DDESVEMLLPRTKPTALRFYGSSNVTVAGITIVNSSQCHLKFDSCEGVMVHDLSVSSPED 274
Query: 178 SS---------------------------------KDILVSEVFCGPGQGISVGSLGKGI 204
S D+ + V CGPG GIS+G LG+
Sbjct: 275 SPNTDGIHLQNSRGVDIHHATLACGDDCISIQTGCSDVNIHSVNCGPGHGISIGGLGRFN 334
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
V +TVR+ T+ GVR+KTW G+ F +I + V+ PI+IDQ YC
Sbjct: 335 TKACVSNVTVRDVKMFRTTTGVRIKTWQGGS-GLVQGVRFSNIQVTEVQTPIMIDQFYCD 393
Query: 265 YNKCN 269
C
Sbjct: 394 RATCR 398
>gi|302798709|ref|XP_002981114.1| hypothetical protein SELMODRAFT_113633 [Selaginella moellendorffii]
gi|300151168|gb|EFJ17815.1| hypothetical protein SELMODRAFT_113633 [Selaginella moellendorffii]
Length = 427
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 154/386 (39%), Gaps = 113/386 (29%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK---------GTVLVPPGK-YLVSFA 75
V +V +GA DG TDD+KA +W A + G VLVP G+ +++S
Sbjct: 20 VSSVVSYGARGDGQTDDTKALLDAWNAACSGGGASRRYGSSSYASMVLVPGGRTFVISPV 79
Query: 76 EFEGPCKASISFQLQGLL--------------DLFSIDTSLSL---AKGTFHGQGETAWP 118
+ +GPCK+ I+ Q+ G L D I L G G+G+ WP
Sbjct: 80 QLKGPCKSLITLQVAGNLVASTRFLTSDETTRDWIVIRKVSGLTIQGGGVLDGRGKQWWP 139
Query: 119 -------LNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLK 171
CH+ PT + + + G+ V+S+ H +I N+ +L
Sbjct: 140 KSCKFDSTQPCHR-----APTSLVLHDSERVLVDGLTLVNSQQIHFSIFHSSNVTATNLI 194
Query: 172 ITA----------HADSSK----------------------------------------- 180
++A H SK
Sbjct: 195 VSAARKSPNTDGVHVQGSKFVNLGTITIDTGMPASFSFFLSFFPFLTLFALLDGDDCISI 254
Query: 181 -----DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDS- 234
+ + ++ CG G GIS+GSLG V +++ T+NG+R+KTWP S
Sbjct: 255 GANTSHVSMRDITCGAGHGISIGSLGNYKSAAFVSNISLDGALLANTTNGLRIKTWPASG 314
Query: 235 HIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPK--DSMPNIEIGNRNLVYN--- 289
+G+A+ +F ++ M+NV+NPI+IDQ YC P+ D +E+ R++VY
Sbjct: 315 GVGLATGISFRNVQMDNVKNPIIIDQFYCDMES---SPQGCDHGSGVEV--RDVVYENIS 369
Query: 290 -------GVNVKVEGPETTSLCSNVK 308
GV + P T + SN++
Sbjct: 370 GSSATPVGVKLNCNHPCTEIVMSNIR 395
>gi|15242508|ref|NP_198807.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|332007107|gb|AED94490.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 373
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 125/280 (44%), Gaps = 44/280 (15%)
Query: 24 NRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCK 82
N + NV ++GA+ DG +DDSKAF +W + N+ G + + +P G +L+ EF GPCK
Sbjct: 33 NNIFNVLNYGAIGDGFSDDSKAFKDAWEDTCNYIGSESIMEIPEGNTFLLQPIEFHGPCK 92
Query: 83 AS-ISFQLQGLLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSD-----CQLPTPIRF 136
+ I + G L K H E A +N + + + P +
Sbjct: 93 SKKIILSISGNLIAPESPYEWKCNKDDCHQWIEFA-HINGLYIDGHGLMACLKRPRGVVI 151
Query: 137 NFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------------ 178
+ ++ I+ I DS F +++ + + L ITA DS
Sbjct: 152 SHSSNVHISNIMVKDSPNFQMSLEDSKWVIVKQLTITADGDSPNTDGIHIQRSQNVIVYD 211
Query: 179 ---------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTS 223
SK I +S + CGPG GIS+GSLG+ E V + VR+CTF T+
Sbjct: 212 SNIRTGDDCISIGDGSKYINISRISCGPGHGISIGSLGRYGTKETVENVVVRDCTFRETT 271
Query: 224 NGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
NGVR+KTW + I N F I +++ P V QL C
Sbjct: 272 NGVRIKTWQTKAVEIK-NVMFNHIHGTSIKKPFV--QLLC 308
>gi|226500736|ref|NP_001141617.1| hypothetical protein [Zea mays]
gi|194705292|gb|ACF86730.1| unknown [Zea mays]
gi|413948585|gb|AFW81234.1| hypothetical protein ZEAMMB73_645258 [Zea mays]
Length = 537
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 132/305 (43%), Gaps = 64/305 (20%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGP-CKA 83
V +V +FGA DG+TDD++AF+ +W A + TVLVP G +++V F GP CK
Sbjct: 138 VFSVVEFGAKGDGVTDDTQAFEAAWAAACKVEA--STVLVPSGLEFVVGPISFSGPYCKP 195
Query: 84 SISFQLQ---------------GLLDLFSIDTSLSLA---KGTFHGQGETAWPLNQCHKN 125
+I FQL GLL +A G +G+G+ W +
Sbjct: 196 NILFQLDGTILAQTSARAWGSAGLLQWLEFTKLTGIAVQGSGVINGRGQDWWTYADPNDA 255
Query: 126 SDCQL--------PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD 177
D + PT +RF ++ T+ GI V+S H+ C + ++DL +++ D
Sbjct: 256 DDESVEMLLPRTKPTALRFYGSSNVTVAGITIVNSSQCHLKFDSCEGVMVHDLSVSSPED 315
Query: 178 SS---------------------------------KDILVSEVFCGPGQGISVGSLGKGI 204
S D+ + V CGPG GIS+G LG+
Sbjct: 316 SPNTDGIHLQNSRGVDIHHATLACGDDCISIQTGCSDVNIHSVNCGPGHGISIGGLGRFN 375
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
V +TVR+ T+ GVR+KTW G+ F +I + V+ PI+IDQ YC
Sbjct: 376 TKACVSNVTVRDVKMFRTTTGVRIKTW-QGGSGLVQGVRFSNIQVTEVQTPIMIDQFYCD 434
Query: 265 YNKCN 269
C
Sbjct: 435 RATCR 439
>gi|357448409|ref|XP_003594480.1| Polygalacturonase [Medicago truncatula]
gi|355483528|gb|AES64731.1| Polygalacturonase [Medicago truncatula]
Length = 380
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 120/282 (42%), Gaps = 73/282 (25%)
Query: 59 IKGTVLVPPGKYLVSFAEFEGPC-KASISFQLQGLLDL---------------FSIDTSL 102
+ T+ VP GK+L+ F G C IS + G L F + +
Sbjct: 27 VPSTIYVPHGKFLLGRVTFRGECTNKDISIIIDGTLVAPSDYHVIGEASYWLTFENVSGV 86
Query: 103 SLAKGTFHGQGETAWPLNQCHKNSDCQLPTPIR--------------------FNFLNDS 142
+ G G+G + W K+ C + + +NF +D+
Sbjct: 87 KIHGGVLDGKGTSLWDCKNSGKS--CPMGAAVSSFFIVRNGTQYLSNHNFLYTWNFNSDN 144
Query: 143 TI-TGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADSSKDILV------- 184
I TG+ S++S+ FHI I C N+K++ +KI A H SS DI +
Sbjct: 145 IIITGLTSLNSQMFHIVIRECRNVKVDGVKIIAPKNSPNTDGIHVQSSSDITILKPRIRT 204
Query: 185 ----------------SEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRV 228
V CGPG GIS+GSLG + + V +TV++ TFT T NG R+
Sbjct: 205 GDDCISIGPSTRNLWIEHVECGPGHGISIGSLGWKLNEPGVKNVTVKSTTFTKTQNGFRI 264
Query: 229 KTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP-YNKCN 269
K+W G + F M +V+NPI+IDQ YCP Y C+
Sbjct: 265 KSWGKPSNGFVRHVHFVHATMIDVQNPILIDQHYCPLYKGCS 306
>gi|225933|prf||1403396A endopolygalacturonase
Length = 456
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 138/317 (43%), Gaps = 58/317 (18%)
Query: 3 LAARFSLLVSFITSVRGIDATNR----VLNVKDFGAVADGITDDSKAFDTSWREAWNWDG 58
A S L I S ID ++ V+NV FGA DG T D+ AF+ +W EA +
Sbjct: 48 FQAYLSYLSKNIESNNNIDKVDKNGIKVINVLSFGAKGDGKTYDNIAFEQAWNEACS-SR 106
Query: 59 IKGTVLVPPGK-YLVSFAEFEGPCKASISFQLQGLLDLFS-----IDTSLSLAKGTFHG- 111
+VP K YL+ F +SIS ++ G L+ S D L +A +
Sbjct: 107 TPVQFVVPKNKNYLLKQITFSVDKNSSISVKIFGSLEASSKISDYKDRRLWIAFDSVQNL 166
Query: 112 ----------QGETAWPLN-QCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINI 159
G+ WP + + +K+ C+ PT + F + + +KS +++ HI
Sbjct: 167 VVGGGGTINGNGQVWWPSSCKINKSLPCRDAPTALTFWNCKNLKVNNLKSKNAQQIHIKF 226
Query: 160 LGCYNLKLNDLKITAHADS---------------------------------SKDILVSE 186
C N+ ++L I A A S S+++ +
Sbjct: 227 ESCTNVVASNLMINASAKSPNTDGVHVSNTQYIQISDTIIGTGDDCISIVSGSQNVQATN 286
Query: 187 VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFED 246
+ CGPG GIS+GSLG G + V +TV NGVR+KTW G ASN F +
Sbjct: 287 ITCGPGHGISIGSLGSGNSEAYVSNVTVNEAKIIGAENGVRIKTWQGGS-GQASNIKFLN 345
Query: 247 IVMNNVENPIVIDQLYC 263
+ M +V+ PI+IDQ YC
Sbjct: 346 VEMQDVKYPIIIDQNYC 362
>gi|449436122|ref|XP_004135843.1| PREDICTED: probable polygalacturonase At1g80170-like [Cucumis
sativus]
gi|449491014|ref|XP_004158774.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase
At1g80170-like [Cucumis sativus]
Length = 371
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 120/273 (43%), Gaps = 56/273 (20%)
Query: 49 SWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLLD-------------- 94
+W+ A ++ V +LV E GPC++ ++ ++ G+++
Sbjct: 3 AWKMACSFPTRVRIVFPASNTFLVHPLELHGPCRSRVTLRIHGIINAPKDPNAWAGLNPR 62
Query: 95 ---LFSIDTSLSL-AKGTFHGQGETAWPLNQCHKNSD--CQ-LPTPIRFNFLNDSTITGI 147
F L+L G +G G W ++ C NS C+ PT I F+ + I +
Sbjct: 63 KWLYFRGVNHLTLEGGGEINGMGYEWW-MSSCKINSTNPCRHAPTAITFHKCKNLKIHHL 121
Query: 148 KSVDSRYFHINILGCYNLKLNDLKITAHADS----------------------------- 178
+DS+ H+ + C + ++LK+ A A S
Sbjct: 122 LVIDSQQMHVALTSCLRVVASNLKVIAPAFSPNTDGIHISASKGVMVKNSIISTGDDCVS 181
Query: 179 ----SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDS 234
S IL+ ++ CGPG GIS+GSLGK +V + V + T NG R+KTW
Sbjct: 182 IVGNSSRILIKDITCGPGHGISIGSLGKRNTSAQVRNVRVDGAVLSNTKNGARIKTWQGG 241
Query: 235 HIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
G A++ F++++M NV NPI+IDQ YC N+
Sbjct: 242 S-GSATDIIFKNMLMKNVSNPIIIDQYYCDSNR 273
>gi|115456093|ref|NP_001051647.1| Os03g0808000 [Oryza sativa Japonica Group]
gi|30103016|gb|AAP21429.1| putative polygalacturonase precursor [Oryza sativa Japonica Group]
gi|41469668|gb|AAS07380.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|108711664|gb|ABF99459.1| Polygalacturonase family protein, expressed [Oryza sativa Japonica
Group]
gi|113550118|dbj|BAF13561.1| Os03g0808000 [Oryza sativa Japonica Group]
Length = 444
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 141/313 (45%), Gaps = 60/313 (19%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
V ++ +GA DG DD+ A +W A VLVP + YL+ GPC+++
Sbjct: 68 VFSLDSYGAHGDGERDDTAALARAWSAACA-SAAPAVVLVPESRSYLLRQVTLSGPCEST 126
Query: 85 ISFQLQGLL----DLFSIDTS-------------LSLAKGTFHGQGETAWPLNQCHKNSD 127
I ++G L D+ + + S L++ G W N C N
Sbjct: 127 IKLMVKGTLVASPDMSNWNESNRRYWIVVRGVDGLAVGGGGTIDGNGEGWWENSCKINRA 186
Query: 128 --CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA---------- 174
C+ PT + F+ ++ ++ G+K V+S+ H+++ C ++L L I+A
Sbjct: 187 LPCKGAPTALSFHTCDNLSVNGLKMVNSQQIHMSVEDCTGVELAHLSISAPGTSPNTDGI 246
Query: 175 HADSSKDILVSE-----------------------VFCGPGQGISVGSLGKGIKDEEVVG 211
H SK++ VS+ + CGPG GIS+GSLG EV
Sbjct: 247 HITHSKNVQVSDCTIKTGDDCVSIEDGTHGLHVTRLVCGPGHGISIGSLGDDNSRAEVSD 306
Query: 212 LTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC-PYNKCNI 270
+ + T+NG R+KTW G A + F+++VMN+V+NPI+IDQ YC KC
Sbjct: 307 IFIDTVHLYGTTNGARIKTWQGGS-GYAKDIVFQNMVMNSVKNPIIIDQNYCDSAKKCET 365
Query: 271 KPKDSMPNIEIGN 283
+ + +EI N
Sbjct: 366 QEGSA---VEISN 375
>gi|356497743|ref|XP_003517718.1| PREDICTED: polygalacturonase At1g48100-like [Glycine max]
Length = 461
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 128/301 (42%), Gaps = 62/301 (20%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGPCKASI 85
+V FGA +G++DDS+AF +W A G TV +P K+L+ +GPC + +
Sbjct: 65 FDVLSFGAKGNGVSDDSEAFLAAWNGACKVAG--ATVKIPAQLKFLIKPVTLQGPCISDL 122
Query: 86 SFQLQGLL------------DLFS------IDTSLSLAKGTFHGQGETAWPLNQCH---- 123
+ Q+ G L LF + GT GQG W ++ +
Sbjct: 123 TLQIDGTLLAPPEASTWPKSSLFQWINFKWVRNFTIKGSGTVDGQGYNWWSSSEFYDIQK 182
Query: 124 ---KNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA------ 174
K+ PT IRF N T+ I+ ++S H+ +K+N++ I++
Sbjct: 183 SYSKHIPGMKPTAIRFYSSNFVTVRDIRIINSPLCHLKFDNSKGIKVNNITISSPENSPN 242
Query: 175 ----HADSSKD-----------------------ILVSEVFCGPGQGISVGSLGKGIKDE 207
H +++D I V + CGPG GIS+G LGK
Sbjct: 243 TDGIHLQNTQDVEIQRSIISTGDDCVSIQTGCSNIHVHHINCGPGHGISLGGLGKDKSAA 302
Query: 208 EVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
V +TV + + T G R+KTW IG+ N TF I + +V PI+IDQ YC
Sbjct: 303 CVSDITVEDISMKNTLYGARIKTW-QGGIGMVKNVTFSRIQVYDVMYPIMIDQYYCDKQI 361
Query: 268 C 268
C
Sbjct: 362 C 362
>gi|350535549|ref|NP_001234200.1| polygalacturonase [Solanum lycopersicum]
gi|4325090|gb|AAD17250.1| polygalacturonase [Solanum lycopersicum]
Length = 367
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 116/260 (44%), Gaps = 55/260 (21%)
Query: 58 GIKGTVLVPPGK-YLVSFAEFEGPCK-ASISFQLQGLLD-----------------LFSI 98
+K T+L+P K +LV F+GPCK A+I QL G + F+
Sbjct: 24 AMKSTILIPSEKSFLVGPITFQGPCKSANIHLQLLGSIVAPKDPVAWTGCENVCWIYFTG 83
Query: 99 DTSLSL-AKGTFHGQGETAWPL-NQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFH 156
L + GT +G G+ W ++ N C PT ++FN+ N + GIK V+S H
Sbjct: 84 VAGLFINGSGTINGNGQRWWDTPSRTRVNGTCTKPTVVQFNYCNGLRLNGIKLVNSSRDH 143
Query: 157 INILGCYNLKLNDLKITAHADSS---------------------------------KDIL 183
I + + ++++ I+A S DI
Sbjct: 144 IILTYNKGVTISNIHISAPNYSRNTDGIDIFFSRQVQIRDSIIQTGDDCIGINTGCSDIN 203
Query: 184 VSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFT 243
++ + CGPG GIS+GSLG V + + NC T NGVR+KTW G A
Sbjct: 204 ITGIRCGPGHGISIGSLGPNNTFANVENVYITNCHLEDTQNGVRIKTWQGGS-GYARFIH 262
Query: 244 FEDIVMNNVENPIVIDQLYC 263
FE+I + NVENPI+IDQ YC
Sbjct: 263 FENINLKNVENPIIIDQNYC 282
>gi|218193956|gb|EEC76383.1| hypothetical protein OsI_13998 [Oryza sativa Indica Group]
gi|222626016|gb|EEE60148.1| hypothetical protein OsJ_13044 [Oryza sativa Japonica Group]
Length = 420
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 141/313 (45%), Gaps = 60/313 (19%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
V ++ +GA DG DD+ A +W A VLVP + YL+ GPC+++
Sbjct: 44 VFSLDSYGAHGDGERDDTAALARAWSAACA-SAAPAVVLVPESRSYLLRQVTLSGPCEST 102
Query: 85 ISFQLQGLL----DLFSIDTS-------------LSLAKGTFHGQGETAWPLNQCHKNSD 127
I ++G L D+ + + S L++ G W N C N
Sbjct: 103 IKLMVKGTLVASPDMSNWNESNRRYWIVVRGVDGLAVGGGGTIDGNGEGWWENSCKINRA 162
Query: 128 --CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA---------- 174
C+ PT + F+ ++ ++ G+K V+S+ H+++ C ++L L I+A
Sbjct: 163 LPCKGAPTALSFHTCDNLSVNGLKMVNSQQIHMSVEDCTGVELAHLSISAPGTSPNTDGI 222
Query: 175 HADSSKDILVSE-----------------------VFCGPGQGISVGSLGKGIKDEEVVG 211
H SK++ VS+ + CGPG GIS+GSLG EV
Sbjct: 223 HITHSKNVQVSDCTIKTGDDCVSIEDGTHGLHVTRLVCGPGHGISIGSLGDDNSRAEVSD 282
Query: 212 LTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC-PYNKCNI 270
+ + T+NG R+KTW G A + F+++VMN+V+NPI+IDQ YC KC
Sbjct: 283 IFIDTVHLYGTTNGARIKTWQGGS-GYAKDIVFQNMVMNSVKNPIIIDQNYCDSAKKCET 341
Query: 271 KPKDSMPNIEIGN 283
+ + +EI N
Sbjct: 342 QEGSA---VEISN 351
>gi|357437099|ref|XP_003588825.1| Polygalacturonase [Medicago truncatula]
gi|355477873|gb|AES59076.1| Polygalacturonase [Medicago truncatula]
Length = 394
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 129/289 (44%), Gaps = 56/289 (19%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK--YLVSFAEFEGPCKA- 83
LNV +GA DG TDDSKAF +++ A T++VP G ++ F GPC +
Sbjct: 27 LNVIHYGAKGDGRTDDSKAFVDAFK-ALCGGRYGNTLVVPNGHSFFVRPTLNFSGPCYSK 85
Query: 84 SISFQLQG-----------------LLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNS 126
+I+ ++ G L F+I G +G GE W +
Sbjct: 86 NINIKIMGNILAPKRSDWGRECSLMWLHFFNISGLTLDGSGVINGNGE-GWESREKGIGG 144
Query: 127 DCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNL--------------------- 165
++PT ++F+ + I G+ ++ HI ++ ++
Sbjct: 145 CPRIPTALQFDKCDGLQINGLTHINGPGAHIAVIDSQDITISHIHINSPKKSHNTDGIDL 204
Query: 166 ------KLNDLKITAHAD------SSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLT 213
++D++I + D S+ + VS V CGPG GISVGSLG +E V +
Sbjct: 205 TRTIGVNIHDIQIESGDDCIAVKGGSQFVNVSNVTCGPGHGISVGSLGGHGSEEFVQHFS 264
Query: 214 VRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLY 262
V+NCTF + V++KTWP G A + FEDI++N P+ IDQ Y
Sbjct: 265 VKNCTFNGADSAVKIKTWPGGK-GYAKHIIFEDIIINQTNYPVFIDQHY 312
>gi|449471875|ref|XP_004153433.1| PREDICTED: polygalacturonase-like, partial [Cucumis sativus]
Length = 167
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 89/169 (52%), Gaps = 28/169 (16%)
Query: 179 SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGI 238
+++I V+ V CGPG G+SVGSLGK K++ V + V+NCT +NG R+KTW G+
Sbjct: 1 TENITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPVSGL 60
Query: 239 ASNFTFEDIVMNNVENPIVIDQLYCPYNK-------CNIKPKD----SMPN--------- 278
AS FEDIVM NV+NPI+IDQ Y K N++ K+ S N
Sbjct: 61 ASRIIFEDIVMYNVKNPIIIDQTYGTKKKKESNWKVSNVQFKNIRGTSTTNVAVLLECSK 120
Query: 279 ------IEIGNRNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 321
+E+ + NL Y G N++ S CSN K FG Q P CV
Sbjct: 121 LFPCEGVELRDINLSYGGTNLR--NTTIVSSCSNAKIATFGVQNPPPCV 167
>gi|356562018|ref|XP_003549272.1| PREDICTED: probable polygalacturonase At3g15720-like [Glycine max]
Length = 490
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 129/302 (42%), Gaps = 57/302 (18%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS- 84
+V ++GA +G +DD+ AF +W+ T++VP G + V F GPC++
Sbjct: 124 FDVLNYGAKGNGRSDDTNAFVQAWKALCGASNGTSTLVVPAGHTFFVRQTRFRGPCQSQK 183
Query: 85 ISFQLQG----------------LLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDC 128
+ Q+ G L + G +GQG W + + C
Sbjct: 184 LDIQIMGNLLAPTKDAWKKCSGPWLYFLDVRGMTVHGSGVINGQGRDWW--GKPYGTGAC 241
Query: 129 -QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--------- 178
+PT + F + I+G+ ++ HI ++ ++ ++++ I + +S
Sbjct: 242 SHMPTALLFQRCDGLQISGLTHINGPGSHIFVVHSQDITISNIDIYSPLESHNTDGIDLT 301
Query: 179 ------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTV 214
SK I ++ V CGPG GISVGS+G+G ++E V + V
Sbjct: 302 NSVRVNIRDSIIRTGDDCIAMKGGSKFININNVTCGPGHGISVGSIGQGGQEEFVENVNV 361
Query: 215 RNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLY--CPYNKCNIKP 272
NC F S+ R+KTWP G A N F++I +N + PI + Q Y P K +K
Sbjct: 362 SNCIFNGASSAARIKTWPGGK-GYAKNIAFQNISVNQTDYPIYLSQHYMGTPEKKDAVKV 420
Query: 273 KD 274
D
Sbjct: 421 SD 422
>gi|357437101|ref|XP_003588826.1| Polygalacturonase [Medicago truncatula]
gi|355477874|gb|AES59077.1| Polygalacturonase [Medicago truncatula]
Length = 402
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 131/290 (45%), Gaps = 58/290 (20%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK--YLVSFAEFEGPCKA- 83
L+V +GA DG TDDSKAF +++ A T++VP G+ ++ F GPC +
Sbjct: 35 LDVIHYGAKGDGRTDDSKAFVEAFK-ALCRGRYGNTLVVPNGRSFFVRPTLNFSGPCHSK 93
Query: 84 SISFQLQG-----------------LLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNS 126
+I+ ++ G + F+I + G +G GE W ++
Sbjct: 94 NINIKIMGNILAPKRSDWGRECSLYWIHFFNIHGLILDGSGVINGNGEDWW--SKVKGTG 151
Query: 127 DC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------- 178
C ++PT ++F+ + ITG+ ++ HI + ++ ++ + I + +S
Sbjct: 152 GCPRIPTALQFDKCDGLQITGLTHINGPGPHIAVTDSQDITISHIHINSPKESHNTDGID 211
Query: 179 --------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGL 212
S+ + VS+V CGPG GISVGSLG E V L
Sbjct: 212 LTRAIRVNVHDIPIRSGDDCIAIKGGSQFVNVSQVTCGPGHGISVGSLGGHGSPEFVEHL 271
Query: 213 TVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLY 262
++NCTF + V++KTWP G A + FEDI++ P+ IDQ Y
Sbjct: 272 RIKNCTFNGGDSAVKIKTWPGGK-GYAKDIIFEDIILYQTNYPVYIDQHY 320
>gi|84798479|gb|ABC67156.1| polygalacturonase [Coffea arabica]
Length = 119
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 176 ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSH 235
D SK + ++ V CGPG GIS+GSLG+ +E VVG+ VRNCT T GVRVK+WP +
Sbjct: 28 GDGSKQVSITNVVCGPGHGISIGSLGRYKNEEPVVGVFVRNCTLINTLTGVRVKSWPSAT 87
Query: 236 IGIASNFTFEDIVMNNVENPIVIDQL-YCP 264
G A++ F+DI M NV +PIVIDQ YCP
Sbjct: 88 TGAATDVHFDDITMRNVTSPIVIDQKNYCP 117
>gi|224133792|ref|XP_002321662.1| predicted protein [Populus trichocarpa]
gi|222868658|gb|EEF05789.1| predicted protein [Populus trichocarpa]
Length = 352
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 150/351 (42%), Gaps = 56/351 (15%)
Query: 15 TSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVL-VPPGK-YLV 72
T R + + N+V NV D+GAV DG TDD++AF +W++ ++ VP GK +L+
Sbjct: 14 TQSRSLRSCNQVYNVIDYGAVGDGDTDDTQAFKDAWKDVCKSSSCSVPIIQVPSGKSFLL 73
Query: 73 SFAEFEGPCKA-SISFQLQGLLDLFS---------------------IDTSLSLAKGTFH 110
F G CK I FQ+ G + S +D GT
Sbjct: 74 QPLTFNGECKPDQIIFQIDGTMKAPSDPSDWKCQEHRYCKQWITFDEVDNLTIRGSGTMD 133
Query: 111 GQGETAWPL----NQCH------KNSDCQLPTPIRFNFLNDSTITGIKSVDS---RYFHI 157
GQG T W L H K+S R ++ S +T DS H+
Sbjct: 134 GQGSTWWELISHSQNVHLEGLTFKDSPQMHMAFERSEWVYASNLTIQAPGDSPNTDGIHL 193
Query: 158 ----NILGCYNLKLNDLKITAHADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLT 213
NI Y+ + + D S I ++ + CGPG GIS+GSLG + E V +
Sbjct: 194 QHAKNIFIDYSRIMTGDDCISIGDGSSQINITRIACGPGHGISIGSLGIDGESETVEDVH 253
Query: 214 VRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPK 273
V + FT T+NG R+KTW S + I S FE+I + P V +I
Sbjct: 254 VSDVVFTETTNGARIKTWQSSAVEI-SKIRFENIYGTSHRKPAV-----------HIACS 301
Query: 274 DSMP--NIEIGNRNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPA-TCV 321
S+P +I + N +L +G E ++ C+NV+ G+ P TC+
Sbjct: 302 KSVPCTDIVLSNVHLEAADDGDGDDGDEPSTYCANVQGHAMGRVFPPLTCL 352
>gi|405779218|gb|AFS18538.1| PG2, partial [Cucurbita pepo subsp. pepo]
Length = 171
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 62/89 (69%)
Query: 179 SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGI 238
+ ++ + V CGPG GIS+GSLGK +K++ V +TV++C F T NGVR+K+W G
Sbjct: 13 TSNLWIENVACGPGHGISIGSLGKALKEDGVQNVTVKSCRFMNTQNGVRIKSWGRPSSGF 72
Query: 239 ASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
A N F+ + M NV+NPI+IDQ YCP+NK
Sbjct: 73 ARNIRFQHLKMTNVKNPIIIDQNYCPHNK 101
>gi|27902550|gb|AAO24262.1| putative style polygalacturonase [Turnera subulata]
Length = 473
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 127/307 (41%), Gaps = 72/307 (23%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGP-CKAS 84
NV D+GA DG TDD+KA+ + + A + +LVP G + V F G C A+
Sbjct: 88 FNVLDYGAKGDGHTDDTKAWTDAGKVA------RSKILVPAGSVFFVGPVSFLGSGCGAN 141
Query: 85 ISFQLQG-----------------LLDLFSIDTSLSLAKGTFHGQGETAWP--------- 118
I QL G ++ ++ KGT G+G W
Sbjct: 142 IELQLDGTILAPVSSKIWGSGLLQWIEFKELNGFTIQGKGTIDGRGSVWWNDLPSYGSEW 201
Query: 119 ----LNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA 174
NQ PT +RF T+TGI +S H+ C ++++D ++
Sbjct: 202 ESEVGNQLDGKMPSTKPTALRFYGSTGVTVTGITIQNSPQTHLKFDSCTGVQVSDFTTSS 261
Query: 175 ----------HADSSKDILV------------------SEVF-----CGPGQGISVGSLG 201
H +S+++L+ S VF CGPG GIS+G LG
Sbjct: 262 PGNSPNTDGIHLQNSQNVLIYSSDLACGDDCISIQTGCSNVFIHNVNCGPGHGISIGGLG 321
Query: 202 KGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQL 261
K V +TVR+ + T GVR+KTW G TF ++ ++ V PI+IDQ
Sbjct: 322 KDNTKACVSNVTVRDVSMHNTLTGVRIKTWQGGS-GSVQGITFSNVQVSGVGTPIMIDQF 380
Query: 262 YCPYNKC 268
YC +KC
Sbjct: 381 YCDGSKC 387
>gi|326514360|dbj|BAJ96167.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 532
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 135/310 (43%), Gaps = 71/310 (22%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGP-CKA 83
V +V +FGA DG+TDD++AF+ +W A + TVLVPP +++V F GP CK
Sbjct: 130 VFSVVNFGARGDGVTDDTQAFEAAWAAACKVEA--STVLVPPELEFVVGPISFSGPNCKP 187
Query: 84 SISFQLQGLLDL----------------FSIDTSLSL-AKGTFHGQGETAWPL------- 119
+I FQL G + F+ +S+ G +GQG+ W
Sbjct: 188 NIIFQLDGTISAQTGARAWGSGLLQWLEFTKLNGISIQGSGVINGQGKEWWTYSDSNDDD 247
Query: 120 --------NQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLK 171
+ K + PT +RF + +TGI V+S H+ C + +++L
Sbjct: 248 DDMDSYTDQELEKMPQIK-PTALRFYGSTNVRVTGISIVNSPQCHLKFDSCQGVMVHNLT 306
Query: 172 ITA----------HADSSKDILVSE-----------------------VFCGPGQGISVG 198
I++ H +SKD+ + V CGPG GIS+G
Sbjct: 307 ISSPETSPNTDGIHLQNSKDVNIHHTDLACGDDCISIQTGCSDVNIHNVNCGPGHGISIG 366
Query: 199 SLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVI 258
LG+ V +TVR+ T GVR+KTW G+ F +I M+ V+ PI+I
Sbjct: 367 GLGRYNTKACVSNITVRDVNMFKTMTGVRIKTWQGGS-GLVQGIRFSNIHMSEVQTPIMI 425
Query: 259 DQLYCPYNKC 268
DQ YC C
Sbjct: 426 DQFYCDKTAC 435
>gi|449530160|ref|XP_004172064.1| PREDICTED: polygalacturonase QRT2-like, partial [Cucumis sativus]
Length = 314
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 109/241 (45%), Gaps = 51/241 (21%)
Query: 59 IKGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLLDLFSIDTSLSLAKGTFHGQGETAWP 118
I+GT+ P +++E + I FQ +L + KG +G G W
Sbjct: 1 IEGTIKASP-----HISDYEKDRRHWIIFQ-----NLLGLRVE---GKGIINGNGRKWW- 46
Query: 119 LNQCHKNSDC---QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH 175
LN C N + PT + F + + G++ +++ H++ C N+K +L I +
Sbjct: 47 LNSCKVNKTLPCKEAPTAVTFFQCTNLRVEGLRFRNAQQMHLSFQKCNNVKALNLWIHSP 106
Query: 176 ADS---------------------------------SKDILVSEVFCGPGQGISVGSLGK 202
+S SK++ + CGPG GIS+GSLG
Sbjct: 107 GNSPNTDGIHVTGTQFIVIKNCLIMTGDDCISIVSGSKNVRAKGITCGPGHGISIGSLGA 166
Query: 203 GIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLY 262
G + EV + V F+ T+NGVR+KTW G A N F++IVM+NV NPI+IDQ Y
Sbjct: 167 GKTEAEVSNVVVDTAKFSGTTNGVRIKTWQGGK-GYAQNIIFQNIVMDNVTNPIIIDQNY 225
Query: 263 C 263
C
Sbjct: 226 C 226
>gi|357138599|ref|XP_003570878.1| PREDICTED: polygalacturonase-like [Brachypodium distachyon]
Length = 497
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 127/293 (43%), Gaps = 59/293 (20%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG--KYLVSFAEFEGPCKA 83
V+NV FGA DG DD++AF +W++A + + VLV P +Y V F GPCK
Sbjct: 101 VVNVDSFGAAGDGTADDTEAFRNAWKKACS---LSNAVLVVPANRRYKVGTMRFMGPCKE 157
Query: 84 SISFQLQGLL-------DLFSIDTSLSLAKGTFHGQ----------GETAWPLNQCH--K 124
+ +QG + D L L G G + W N C K
Sbjct: 158 KLVVLIQGAIVAPEEPEDWDPASPRLWLLFGGLVGARIQGGGIIDGSGSKWWANSCKIDK 217
Query: 125 NSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--SKD 181
+ C+ PT + + + ++ +++ H+ + + + ++ + I+A DS +
Sbjct: 218 SKPCRGAPTAVTIDSSRSVRVRRLRIQNAQQMHLTVSRSHAVSVSGVIISAPRDSPNTDG 277
Query: 182 ILVSE-------------------------------VFCGPGQGISVGSLGKGIKDEEVV 210
I VSE + C PG GIS+GSLG+G V
Sbjct: 278 IHVSESTAVTITSCRIGTGDDCISISNASFAIKMKGIVCDPGHGISIGSLGQGGSYAAVE 337
Query: 211 GLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
G+T+ N + NGVR+KTW G + F ++++ V++PI+IDQ YC
Sbjct: 338 GVTLDNARISNAQNGVRIKTW-QGGTGYVRDVRFSNVLVEGVDHPIIIDQFYC 389
>gi|357132727|ref|XP_003567980.1| PREDICTED: probable polygalacturonase At1g80170-like [Brachypodium
distachyon]
Length = 454
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 148/401 (36%), Gaps = 99/401 (24%)
Query: 19 GIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNW---------DGIKGTVL-VPPG 68
G R+L + DFGAV DGI +D++AF +W A D T L VP G
Sbjct: 23 GTAEARRLLTLADFGAVGDGIANDTQAFLDAWAAACGGTSSDKANLNDPSSDTYLNVPAG 82
Query: 69 K-YLVSFAEFEGPCKASISFQLQG------------------LLDLFSIDTSLSLAKGTF 109
K Y + GPC+ I + G L + G
Sbjct: 83 KSYQIWPLTLAGPCRGEIKLLISGNIVAPENPDDWQGSDGGQWLHFLGVKGLAISGGGIV 142
Query: 110 HGQGETAW---PLNQCHKNSDC-------QLPTPIRFNFLNDSTITGIKSVDSRYFHINI 159
G+G+ W P N ++ +C P + F + T+ GI +S H+
Sbjct: 143 DGRGQQWWARQPQNSSCESENCTASQPPAAAPKAVHFEDCKEITVMGITVQNSPREHLAF 202
Query: 160 LGCYNLKLNDLKITAHADSS---------------------------------KDILVSE 186
C +K N L++TA DS +D+ +
Sbjct: 203 TRCSVVKANYLRVTAPVDSPGTVGALLVNSSDVRIMDDLFSVGGDCVSMVGRCRDVRLRA 262
Query: 187 VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFED 246
V CGPG GIS+G LG+ ++ + + FT T G+R+KT D G F
Sbjct: 263 VSCGPGHGISIGGLGENGSLHKIEKIKMDTLFFTNTKYGLRIKTHEDG-CGFVRKVKFAH 321
Query: 247 IVMNNVENPIVIDQLYCPYNK---CNIKPKDSMPNIEIGN-------------------- 283
I+M NV +PIVIDQ Y N+ C + IE +
Sbjct: 322 ILMRNVSDPIVIDQHYSYSNQGTSCEFPNVTLVEKIEYNDITGTSATEQAVKFACSDTMP 381
Query: 284 -RNLVYNGVNVKVE--GPETTSLCSNVKPTLFGKQIPATCV 321
R L +GVN+ + G ++ C+ FG +P +C+
Sbjct: 382 CRRLSMSGVNLTMAGGGGNVSAYCNQAFGRNFGAIVPDSCL 422
>gi|224100173|ref|XP_002311773.1| predicted protein [Populus trichocarpa]
gi|222851593|gb|EEE89140.1| predicted protein [Populus trichocarpa]
Length = 517
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 135/325 (41%), Gaps = 87/325 (26%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKY--LVSFAEFEGP-CKA 83
NV DFGA +G +DD+KAF +W A ++ + L+ P +Y LV F GP C+A
Sbjct: 102 FNVLDFGAKGNGKSDDTKAFQAAWAAACK---VEASTLIVPAEYVFLVGPISFSGPYCQA 158
Query: 84 SISFQL--------------QGLLDLFSIDTSLSL---AKGTFHGQGETAW--------- 117
+I FQL +GLL + + KGT G G W
Sbjct: 159 NIVFQLDGTIIAPSNANAWGRGLLQWLEFTKLVGITIQGKGTIDGSGSVWWQDYPFEDPI 218
Query: 118 --------PLN---QCHKNSDCQ----------LPTPIRFNFLNDSTITGIKSVDSRYFH 156
PLN Q H + PT +RF + T+TGI +S H
Sbjct: 219 DSESELIIPLNNTVQQHPPMPIRNELNGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCH 278
Query: 157 INILGCYNLKLNDLKITA----------HADSSKDILVSE-------------------- 186
+ C + ++D+++++ H +SKD+L+
Sbjct: 279 LKFDNCVGVVVHDMRVSSPGNSPNTDGIHLQNSKDVLIRSTDLACGDDCVSIQTGCTNVY 338
Query: 187 ---VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFT 243
V CGPG GIS+G LGK V +TVR+ T GVRVKTW G
Sbjct: 339 IHNVNCGPGHGISIGGLGKDNTKACVSNITVRDVVMHGTMTGVRVKTWQGGS-GSVQGVL 397
Query: 244 FEDIVMNNVENPIVIDQLYCPYNKC 268
F +I ++ V+ PIVIDQ YC KC
Sbjct: 398 FSNIQVSEVQLPIVIDQFYCDKRKC 422
>gi|326516452|dbj|BAJ92381.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 528
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 126/288 (43%), Gaps = 61/288 (21%)
Query: 32 FGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG--KYLVSFAEFEGPCKASISFQL 89
FGAV DG DD++AF +W +A + +K VLV +Y V ++F GPCK + +
Sbjct: 132 FGAVGDGCADDTEAFAKAWEKACS---LKDAVLVVTAGRRYKVGPSKFMGPCKERLVVLI 188
Query: 90 QGLL--------------DLFSIDTSLSLAK----GTFHGQGETAWPLNQCH--KNSDCQ 129
G + L+ + L A+ G G G + W N C ++ C+
Sbjct: 189 HGTIVAPEEPSQWDPKSPRLWLLFGGLVGARIQGGGVIDGSG-SKWWANSCKVDRSKPCK 247
Query: 130 -LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--SKDILVSE 186
PT + + + G+ +++ H+ + ++L+ + I A DS + I V+E
Sbjct: 248 GAPTAVTIDSCRGVRVRGLTIQNAQQMHLTVSRSRGVRLDGMAIQAPGDSPNTDGIHVAE 307
Query: 187 -------------------------------VFCGPGQGISVGSLGKGIKDEEVVGLTVR 215
+ C PG GIS+GSLG+G V G+T+
Sbjct: 308 STAVTITGARIGTGDDCVSISNASFAVKMKGIVCDPGHGISIGSLGQGGSYAAVEGVTLD 367
Query: 216 NCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
NGVR+KTW G N F +++++ V++PI+IDQ YC
Sbjct: 368 GARIARAQNGVRIKTW-QGGAGYVRNVRFTNVLVDAVDHPIIIDQFYC 414
>gi|297734026|emb|CBI15273.3| unnamed protein product [Vitis vinifera]
Length = 393
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 156/400 (39%), Gaps = 100/400 (25%)
Query: 3 LAARFSLLVSFITSVRGIDATN---RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGI 59
+A+R +L F+ S+ + T V +V +GA+ +G TDDS AF +W + N
Sbjct: 1 MASRLEIL--FLVSLFSVLLTPLHCSVFDVTQYGAIGNGSTDDSPAFMLAWTDVCNSSAS 58
Query: 60 KGTVLVPPGK-YLVSFAEFEGPCKAS-ISFQLQGLLDLFS-------------------- 97
+P K +L++ F+GPC+++ I FQ+ G++ S
Sbjct: 59 TPIFHIPGNKTFLLNPVFFQGPCRSTNIQFQIDGIITAESEPSNWKCTRNRCDKWIHFKR 118
Query: 98 IDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHI 157
+D G G G+ W + + N +TG+ ++ + H+
Sbjct: 119 VDGLFINGSGIIDGNGKNWWSSGYINA---------LEVTSSNKVQLTGLSFRNNPHMHV 169
Query: 158 NILGCYNLKLNDLKITAHADS---------------------------------SKDILV 184
C + ++++ I A DS +I +
Sbjct: 170 VFDSCDMVHISNVSIDAPGDSPNTDGIHLKESTHVNIEFCSIRTGDDCISIVDKCSNITI 229
Query: 185 SEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTF 244
+ CGPG GIS+GS+G+ E V + V + F + +GVR+KTW G A F
Sbjct: 230 QNIECGPGHGISIGSMGQYGAYETVENIYVSDVQFKGSLSGVRIKTWQGGK-GHARKMVF 288
Query: 245 EDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNIEIGN--------------------- 283
+ I N + PI IDQ YCP+ KC+ + +EI +
Sbjct: 289 KGITSLNTQYPIQIDQFYCPHAKCD----EQADAVEISDISYIDIKGTSMRKTAVKLACS 344
Query: 284 -----RNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPA 318
+N+ +N+ +G ++ C NV T G P+
Sbjct: 345 ESVPCKNIFMQDINLSYQGTNASAYCKNVNGTSQGIMEPS 384
>gi|50313468|gb|AAT74604.1| polygalacturonase [Musa acuminata]
Length = 320
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 34/258 (13%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPP-GKYLVSFAEFEGPCKASI 85
+V+ FGAV DG+TDD++AF ++WR A + + T+ VP G ++++ F GPC+ +
Sbjct: 71 FDVRSFGAVGDGVTDDTEAFRSAWRAACSVE--SATLFVPSDGVFMITSTIFPGPCQPGL 128
Query: 86 SFQLQGLLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPTP----IRFNFLND 141
FQ+ + S + S + ++ D ++ I+F+ D
Sbjct: 129 VFQV-----ILSTKITCSGCIXLLLWIQLIRFFMSCNLTVRDLRIENSPQFHIKFDACED 183
Query: 142 STITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSS--------------------KD 181
I G+ S++S F N G + + I S+ D
Sbjct: 184 VHIEGL-SINSPAFSPNTDGVHIENTRSVTIYNSMISTGWKRLLSGSGDDCISIGPGCSD 242
Query: 182 ILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASN 241
+ + V CGPG GIS+GSLG + V ++V+N + NGVR+KTW +G S+
Sbjct: 243 VDIQNVTCGPGHGISIGSLGMHNSEACVSNVSVKNAVIRNSDNGVRIKTW-QGGMGSVSD 301
Query: 242 FTFEDIVMNNVENPIVID 259
+F+ + M NV NPI+ID
Sbjct: 302 ISFDTVYMENVRNPILID 319
>gi|147840305|emb|CAN70684.1| hypothetical protein VITISV_031809 [Vitis vinifera]
Length = 256
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 107/228 (46%), Gaps = 35/228 (15%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
+ V + A ADG TD ++A +WR+A + TV++P G Y + G KA I
Sbjct: 27 IFYVTKYEAKADGNTDITQALLNAWRDAC-ASPVVSTVMIPDGTYALGQITIGGXYKAPI 85
Query: 86 SFQLQGLLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTIT 145
+F +QG + S+DTS A+ + + + Q +RFNF+ +S +
Sbjct: 86 NFNVQGTVKS-SMDTSRFKAEAGWIAFQQIDQFILSYGGVFYGQAKPNLRFNFITNSMVK 144
Query: 146 GIKSVDSRYFHINILGCYNLKLNDLKITAH------------------------------ 175
I S D++ F + +LGC NL ++ I+A
Sbjct: 145 DITSRDNKQFQMXLLGCKNLTFYNVGISAPEVSINTDGIHIGRSSGFNITNSTVETGDDC 204
Query: 176 ---ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFT 220
D S+ I + V CGPG GISVGSLGK +E VVG++V+NCTFT
Sbjct: 205 VSIGDGSEQINIQXVTCGPGYGISVGSLGKCPNEEPVVGISVKNCTFT 252
>gi|125581161|gb|EAZ22092.1| hypothetical protein OsJ_05753 [Oryza sativa Japonica Group]
Length = 250
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 104/209 (49%), Gaps = 40/209 (19%)
Query: 136 FNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----------------- 178
++ + T+ GI +S++FH+NI N+ ++ + IT+ DS
Sbjct: 6 IDYSTNVTVRGITLKNSKFFHLNIYESKNVVIDKVTITSPGDSPNTDGIHVGDSTNITIS 65
Query: 179 ----------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCT 222
+K + V+ V CGPG GISVGSLG+ +++V + V NCT T
Sbjct: 66 STTIAAGDDCISIGPGTKMVRVNGVRCGPGHGISVGSLGRYKDEKDVEDIIVTNCTIKGT 125
Query: 223 SNGVRVKTWPDSHIGI-ASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNIEI 281
+NG+R+K++ DS + A+ F ++ I M+NV PI+IDQ YCP N C+ + +I
Sbjct: 126 TNGLRIKSYEDSKSQLRATKFLYDGITMDNVSYPIIIDQKYCPNNICSASGTSKVAVTDI 185
Query: 282 GNRNLVYNGVNVKVEGPETTSL-CSNVKP 309
+N+V PE +L C+N P
Sbjct: 186 VFKNIVGTSAT-----PEAVTLNCANNLP 209
>gi|297739403|emb|CBI29512.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 61/89 (68%)
Query: 179 SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGI 238
+ ++ + V CGPG GIS+GSLGK +K+E V +TV+ TFT + NGVR+K+W + G
Sbjct: 718 ATNLWIENVACGPGHGISIGSLGKDLKEEGVQNVTVKTVTFTGSQNGVRIKSWARASNGF 777
Query: 239 ASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
F+ I+M NV+NPIVIDQ YCP +K
Sbjct: 778 VKRVVFQHILMVNVQNPIVIDQNYCPGHK 806
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 48/111 (43%), Gaps = 16/111 (14%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPC 81
AT NV + GA DG TD +KAF +W A T+ VPPG+YL+ A F G
Sbjct: 352 ATAVTYNVVNLGAKGDGHTDSTKAFLNAWAAACG-SASPATIYVPPGRYLLLNAVFRGCK 410
Query: 82 KASISFQLQGLLD---------------LFSIDTSLSLAKGTFHGQGETAW 117
+I+F++ L F T +S+ G GQG W
Sbjct: 411 NHAITFRIDATLVAPSDYRVIGNAANWLAFQDVTGVSIIGGVLDGQGTGLW 461
>gi|297736775|emb|CBI25976.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 112/269 (41%), Gaps = 62/269 (23%)
Query: 61 GTVLVPPGK-YLVSFAEFEGPCKASISFQLQGLLD-------------------LFSIDT 100
G VLVP ++++ F GPCK + FQ+ G+L + +D
Sbjct: 13 GIVLVPADHVFMITSTIFSGPCKPGLVFQVDGVLMPPNGPDCWPKSDSKKQWLVFYRLDQ 72
Query: 101 SLSLAKGTFHGQGETAWPLN-QCHKNSD-------CQLPTPIRFNFLNDSTITGIKSVDS 152
GT G G W L + H+ + C P IRF ++ ++ ++ +S
Sbjct: 73 MTFTGSGTIEGNGGDWWELPCKPHRGPNGSTLPGPCDSPALIRFFMSSNLVVSSLRIQNS 132
Query: 153 RYFHINILGCYNLKLNDLKITA----------HADSSK---------------------- 180
FH+ GC + + L I++ H +++K
Sbjct: 133 PQFHMKFDGCEGVLIEKLSISSPKLSPNTDGIHIENTKSVGIYNSEIGNGDDCISIGRGC 192
Query: 181 -DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIA 239
D+ + V CGP GIS+GSLG V +TVRN + NGVR+KTW G
Sbjct: 193 SDVNIEGVTCGPSHGISIGSLGVQNSQACVSNITVRNVFIKDSDNGVRIKTW-QGGTGSV 251
Query: 240 SNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
S +FE+I M NV N ++IDQ YC C
Sbjct: 252 SGISFENIQMENVRNCMIIDQYYCLSKAC 280
>gi|297802786|ref|XP_002869277.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315113|gb|EFH45536.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 332
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 80/165 (48%), Gaps = 34/165 (20%)
Query: 131 PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------------ 178
P +RF + G+ ++S HI+I GC N L++L + A A+S
Sbjct: 47 PEAVRFFGCQNLLYKGLTQINSPRNHISIFGCTNATLSNLHLIAPANSPNTDGIDISHSQ 106
Query: 179 ---------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNC 217
S DI ++ V CGPG GIS+GSLG+G E V + VR+C
Sbjct: 107 NIHVLSSTINTGDDCVAIKGASYDINITYVTCGPGHGISIGSLGQGGASEVVQNVNVRHC 166
Query: 218 TFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLY 262
TF+ T NG R+KTWP G N +E+I + N PI+IDQ Y
Sbjct: 167 TFSGTQNGARIKTWPGGR-GFVKNILYENITLINANFPIIIDQQY 210
>gi|158634620|gb|ABW76153.1| polygalacturonase [Vitis vinifera]
Length = 483
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 130/327 (39%), Gaps = 84/327 (25%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGP-CKA 83
NV FGA DG DD+KAF+ +W A G T++VP G +LV F GP C+
Sbjct: 72 TFNVLHFGAKGDGKADDTKAFEAAWAAACQVRG--STMMVPSGSVFLVKPITFSGPNCEP 129
Query: 84 SISFQLQG-----------------LLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNS 126
+I FQL G LD + KGT GQG W N S
Sbjct: 130 NIVFQLDGKIIAPRSSSAWGSGFYQWLDFSKLQGITIRGKGTIDGQGSIWW--NDSTDES 187
Query: 127 DCQLPT-------------------------PIRFNFLNDS--TITGIKSVDSRYFHINI 159
+ + PT P F S T+TGI +S H+
Sbjct: 188 ESETPTAGDSLYSSKQDSISGELSAKMPSTKPTALRFYGSSVVTVTGITIQNSPQTHLKF 247
Query: 160 LGCYNLKLNDLKITAHADSS---------------------------------KDILVSE 186
C ++++ + +++ DS +I V
Sbjct: 248 DDCTGVQVSGVTVSSPGDSPNTDGIHLQNSQNVVIYSTNLACGDDCVSIQTGCSNIFVHN 307
Query: 187 VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFED 246
V CGPG GIS+G LG+ V +TVR+ T T GVR+KTW G S F +
Sbjct: 308 VNCGPGHGISIGGLGRDNTKACVENVTVRDITMQDTMTGVRIKTWQGGS-GSVSGVMFSN 366
Query: 247 IVMNNVENPIVIDQLYCPYNKCNIKPK 273
I ++ V+ PI+IDQ YC ++C + K
Sbjct: 367 IQVSRVKTPIMIDQFYCDKSRCQNETK 393
>gi|115438773|ref|NP_001043666.1| Os01g0636500 [Oryza sativa Japonica Group]
gi|55297585|dbj|BAD68931.1| polygalacturonase PG1-like [Oryza sativa Japonica Group]
gi|113533197|dbj|BAF05580.1| Os01g0636500 [Oryza sativa Japonica Group]
gi|218188725|gb|EEC71152.1| hypothetical protein OsI_02991 [Oryza sativa Indica Group]
gi|222618920|gb|EEE55052.1| hypothetical protein OsJ_02751 [Oryza sativa Japonica Group]
Length = 538
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 133/309 (43%), Gaps = 68/309 (22%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGP-CKA 83
V NV DFGA DG++DD+KAF+ +W A TV+VP ++LV F GP CK
Sbjct: 138 VFNVVDFGAKGDGVSDDTKAFEAAWAAACKQGA--STVVVPSELEFLVGPISFSGPYCKP 195
Query: 84 SISFQLQGLL-----------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNS 126
+I FQL G + + ++ G +G+G+ W + +
Sbjct: 196 NILFQLDGTIVAPTSAKAWGSGLLQWIEFTKLNGVSIQGNGIINGRGQQWWTYSDIDDDE 255
Query: 127 DCQL-------------PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKIT 173
D PT +RF + + GI V+S H+ C + ++D+ I+
Sbjct: 256 DDDTQYDVEFERMPQVKPTALRFYGSFNVVVAGITIVNSSQCHLKFDSCQGVMVHDVTIS 315
Query: 174 A----------HADSSKDILVSE-----------------------VFCGPGQGISVGSL 200
+ H +SKD+ + V CGPG GIS+G L
Sbjct: 316 SPENSLNTDGIHLQNSKDVSIHHTNLACGDDCVSIQTGCSNINIHNVNCGPGHGISIGGL 375
Query: 201 GKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQ 260
G+ V +TVR+ T GVR+KTW +G+ + F +I ++ V+ PI+IDQ
Sbjct: 376 GRDNTKACVSNVTVRDVNMFRTMTGVRIKTW-QGGLGLVQDVRFSNIQVSEVQTPIIIDQ 434
Query: 261 LYCPYNKCN 269
YC C+
Sbjct: 435 FYCDKRTCS 443
>gi|413943678|gb|AFW76327.1| hypothetical protein ZEAMMB73_655172 [Zea mays]
Length = 308
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 25/228 (10%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNR----VLNVKDFGAVADGITDDSKAFDTSWREAWNW 56
L L F ++ +GIDA ++ GA +G TD++K + A
Sbjct: 11 LFLLVLFCIVHGEKEESKGIDAKASRPGGSFDITKLGASGNGKTDNTKDVQEACASACGG 70
Query: 57 DGIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLL----------------DLFSIDT 100
G K T+L+P G +LV F PCK ++ Q+ G L ++ +D
Sbjct: 71 TG-KQTILIPKGDFLVGQLNFTCPCKGDVTIQVDGNLLATMDLSQYKEHGKWIEILRVDN 129
Query: 101 SLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINI 159
+ KG GQG W N C K DC+ LP + F+N+ ++G+ ++S++FH+N+
Sbjct: 130 LVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMYFVNNGEVSGVTLLNSKFFHMNM 189
Query: 160 LGCYNLKLNDLKITAHADSSKDILVSEVFCGPGQGISVGSLGKGIKDE 207
C N+ + D+ +TA DS + G GI++ + G+ D+
Sbjct: 190 YQCKNMLIKDVTVTAPGDSPN---TDGIHMGDSSGITITNTVIGVGDD 234
>gi|359488687|ref|XP_003633802.1| PREDICTED: polygalacturonase At1g48100 [Vitis vinifera]
gi|296087645|emb|CBI34901.3| unnamed protein product [Vitis vinifera]
Length = 483
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 130/327 (39%), Gaps = 84/327 (25%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGP-CKA 83
NV FGA DG DD+KAF+ +W A G T++VP G +LV F GP C+
Sbjct: 72 TFNVLHFGAKGDGKADDTKAFEAAWAAACQVRG--STMMVPSGSVFLVKPITFSGPNCEP 129
Query: 84 SISFQLQG-----------------LLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNS 126
+I FQL G LD + KGT GQG W N S
Sbjct: 130 NIVFQLDGKIIAPRSSSAWGSGFYQWLDFSKLQGITIRGKGTIDGQGSIWW--NDSTDES 187
Query: 127 DCQLPT-------------------------PIRFNFLNDS--TITGIKSVDSRYFHINI 159
+ + PT P F S T+TGI +S H+
Sbjct: 188 ESETPTAGDSLYSSKQDSISGELSAKMPSTKPTALRFYGSSVVTVTGITIQNSPQTHLKF 247
Query: 160 LGCYNLKLNDLKITAHADSS---------------------------------KDILVSE 186
C ++++ + +++ DS +I V
Sbjct: 248 DDCTGVQVSGVTVSSPGDSPNTDGIHLQNSQNVVIYSTNLACGDDCVSIQTGCSNIFVHN 307
Query: 187 VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFED 246
V CGPG GIS+G LG+ V +TVR+ T T GVR+KTW G S F +
Sbjct: 308 VNCGPGHGISIGGLGRDNTKACVKNVTVRDITMQDTMTGVRIKTWQGGS-GSVSGVMFSN 366
Query: 247 IVMNNVENPIVIDQLYCPYNKCNIKPK 273
I ++ V+ PI+IDQ YC ++C + K
Sbjct: 367 IQVSRVKTPIMIDQFYCDKSRCQNETK 393
>gi|302759450|ref|XP_002963148.1| hypothetical protein SELMODRAFT_78038 [Selaginella moellendorffii]
gi|300170009|gb|EFJ36611.1| hypothetical protein SELMODRAFT_78038 [Selaginella moellendorffii]
Length = 455
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 137/311 (44%), Gaps = 72/311 (23%)
Query: 19 GIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKY--LVSFAE 76
G +TN + +V FGA DG+TDD+ AF +W +A ++ +++ P + LV
Sbjct: 63 GYYSTN-IYDVLSFGAKGDGVTDDTHAFLAAWNQACK---VESSMVEVPANFVFLVKPLV 118
Query: 77 FEGPCKASISFQLQGLL---------DLFSIDTSLSLAK-----------GTFHGQGETA 116
F GPC+ ++ FQ+ G + + S+ + A+ G +G G
Sbjct: 119 FSGPCQNNLVFQVDGTIVAPTSAKAWNGTSLLQWIEFARVHGLLLQGSCTGAINGNGPAW 178
Query: 117 WPLNQCHKNSDCQLPTP-----IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLK 171
W NS C+ +P +RF ++ + + V+S H+ C + +N++
Sbjct: 179 W-------NSSCKAKSPAPAQAVRFYGSSNVVVQHLAIVNSPQTHLKFDSCQGVVVNNVT 231
Query: 172 IT------------------AHADSSK---------------DILVSEVFCGPGQGISVG 198
I+ A SS+ +I + ++ CGPG GIS+G
Sbjct: 232 ISSPYTSPNTDGIHLQDTRYAAVRSSRVSTGDDCVSIQTGCSNIEIFDMMCGPGHGISIG 291
Query: 199 SLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVI 258
LG+G V ++V + + NGVR+KTW G S+ F +I + NV NPIVI
Sbjct: 292 GLGRGGTKACVSDVSVHDVVVHTSQNGVRIKTWQGGS-GSVSSVHFHNIAVLNVSNPIVI 350
Query: 259 DQLYCPYNKCN 269
DQ YC C+
Sbjct: 351 DQFYCDGRSCH 361
>gi|125553174|gb|EAY98883.1| hypothetical protein OsI_20839 [Oryza sativa Indica Group]
Length = 439
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 124/303 (40%), Gaps = 64/303 (21%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
+L++ DFGAV DG+ +D++A +W A G + VP K YLV GPC+
Sbjct: 29 LLSLDDFGAVGDGVANDTQALVDAWSAACA-TGDHTFLHVPAAKSYLVWPVTLAGPCREE 87
Query: 85 ISFQLQG--------------------LLDLFSI-DTSLSLAKGTFHGQGETAWPLNQCH 123
I + G L + D +LS G G+G W +
Sbjct: 88 IKLFISGNIVAPESPDEWPEGGGGGGEWLHFVGVSDLTLS-GGGVIDGRGHRWWARSCKA 146
Query: 124 KNSDCQ------LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD 177
K++ + P + F ++ GI +S+ H+ C ++K N L+IT+ D
Sbjct: 147 KHNATENCTTQAAPKALHFEDCQGISVMGITLQNSQESHLTFTRCSHVKANYLRITSPED 206
Query: 178 S---------------------------------SKDILVSEVFCGPGQGISVGSLGKGI 204
S S D+ + + CGPG GIS+G LG+
Sbjct: 207 SPDTTGVHVVSSRNVHIMDDSISTGHDCVSIVGNSTDVRLRAISCGPGHGISIGGLGENR 266
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
V + + + T NGVRVKT+ G A F DI+M NV+NPIVIDQ
Sbjct: 267 SYHRVEKIKMDTLFISNTENGVRVKTFQGG-CGTARKMKFGDILMKNVKNPIVIDQQNSS 325
Query: 265 YNK 267
N+
Sbjct: 326 SNE 328
>gi|115465199|ref|NP_001056199.1| Os05g0542900 [Oryza sativa Japonica Group]
gi|52353425|gb|AAU43993.1| unknown protein [Oryza sativa Japonica Group]
gi|113579750|dbj|BAF18113.1| Os05g0542900 [Oryza sativa Japonica Group]
gi|215736855|dbj|BAG95784.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 445
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 122/296 (41%), Gaps = 64/296 (21%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
+L++ DFGAV DG+ +D++A +W A G + VP K YLV GPC+
Sbjct: 35 LLSLDDFGAVGDGVANDTQALVDAWSAACA-TGDHTFLHVPAAKSYLVWPVTLAGPCREE 93
Query: 85 ISFQLQG--------------------LLDLFSI-DTSLSLAKGTFHGQGETAWPLNQCH 123
I + G L + D +LS G G+G W +
Sbjct: 94 IKLFISGNIVAPESPDEWPEGGGGGGEWLHFVGVSDLTLS-GGGVIDGRGHRWWARSCKA 152
Query: 124 KNSDCQ------LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD 177
K++ + P + F ++ GI +S+ H+ C ++K N L+IT+ D
Sbjct: 153 KHNATENCTTQAAPKALHFEDCQGISVMGITLQNSQESHLTFTRCSHVKANYLRITSPED 212
Query: 178 S---------------------------------SKDILVSEVFCGPGQGISVGSLGKGI 204
S S D+ + + CGPG GIS+G LG+
Sbjct: 213 SPDTTGVHVVSSRNVHIMDDSISTGHDCVSIVGNSTDVRLRAISCGPGHGISIGGLGENR 272
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQ 260
V + + + T NGVRVKT+ G A F DI+M NV+NPIVIDQ
Sbjct: 273 SYHRVEKIKMDTLFISNTENGVRVKTFQGG-CGTARKMKFGDILMKNVKNPIVIDQ 327
>gi|22428|emb|CAA44247.1| polygalacturonase [Zea mays]
Length = 197
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 22/186 (11%)
Query: 1 LLLAARFSLLVSFITSVRGIDAT----NRVLNVKDFGAVADGITDDSKAFDTSWREAWNW 56
L L F ++ +GIDA ++ GA +G TD++KA +W A
Sbjct: 11 LFLLVLFCIVHGEKEESKGIDAKASGPGGSFDITKLGASGNGKTDNTKAVQEAWASACGG 70
Query: 57 DGIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLL----------------DLFSIDT 100
G K T+L+P G +LV F GPCK ++ Q+ G L ++ +D
Sbjct: 71 TG-KQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYKDHGNWIEILRVDN 129
Query: 101 SLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINI 159
+ KG GQG W N C K DC+ LP + +F+N+ ++G+ ++S++FH+N+
Sbjct: 130 LVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNM 189
Query: 160 LGCYNL 165
C ++
Sbjct: 190 YRCKDM 195
>gi|222632422|gb|EEE64554.1| hypothetical protein OsJ_19406 [Oryza sativa Japonica Group]
Length = 445
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 122/296 (41%), Gaps = 64/296 (21%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
+L++ DFGAV DG+ +D++A +W A G + VP K YLV GPC+
Sbjct: 35 LLSLDDFGAVGDGVANDTQALVDAWSAACA-TGDHTFLHVPAAKSYLVWPVTLAGPCREE 93
Query: 85 ISFQLQG--------------------LLDLFSI-DTSLSLAKGTFHGQGETAWPLNQCH 123
I + G L + D +LS G G+G W +
Sbjct: 94 IKLFISGNIVAPESPDEWPEGGGGGGEWLHFVGVSDLTLS-GGGVIDGRGHRWWARSCKA 152
Query: 124 KNSDCQ------LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD 177
K++ + P + F ++ GI +S+ H+ C ++K N L+IT+ D
Sbjct: 153 KHNATENCTTQAAPKALHFEDCQGISVMGITLQNSQESHLTFTRCSHVKANYLRITSPED 212
Query: 178 S---------------------------------SKDILVSEVFCGPGQGISVGSLGKGI 204
S S D+ + + CGPG GIS+G LG+
Sbjct: 213 SPDTTGVHVVSSRNVHIMDDSISTGHDCVSIVGNSTDVRLRAISCGPGHGISIGGLGENR 272
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQ 260
V + + + T NGVRVKT+ G A F DI+M NV+NPIVIDQ
Sbjct: 273 SYHRVEKIKMDTLFISNTENGVRVKTFQGG-CGTARKMKFGDILMKNVKNPIVIDQ 327
>gi|255568780|ref|XP_002525361.1| polygalacturonase, putative [Ricinus communis]
gi|223535324|gb|EEF36999.1| polygalacturonase, putative [Ricinus communis]
Length = 519
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 135/327 (41%), Gaps = 91/327 (27%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKY--LVSFAEFEGP-CKA 83
NV +FGA DG TDD+KAF +W A ++ + ++ P +Y LV F GP C+A
Sbjct: 104 FNVLNFGAKGDGKTDDTKAFQAAWAAACK---VEASTMLVPAEYIFLVGPVSFSGPYCQA 160
Query: 84 SISFQLQGLLDLFSIDTSLSLAKG-------------------TFHGQGETAW------- 117
+I FQL G + + S AKG T G G W
Sbjct: 161 NIVFQLNG--KIIAPTNSYVWAKGLLWWIEFTKLKGITIQGTGTIDGSGSVWWEDYPLDD 218
Query: 118 ----------PLN---QCH----------KNSDCQLPTPIRFNFLNDSTITGIKSVDSRY 154
PLN Q H K PT +RF ++T+TGI +S
Sbjct: 219 PEDDETKLIIPLNNTVQQHPPMPVRSELGKKMPSIKPTALRFYGSFNATVTGITIQNSPQ 278
Query: 155 FHINILGCYNLKLNDLKITAHADS----------SKDILVSE------------------ 186
H+ C + ++D+ I++ DS SKD+L+
Sbjct: 279 CHLKFDNCIGVVIHDITISSPGDSPNTDGIHLQNSKDVLIHSSNLACGDDCVSIQTGCTN 338
Query: 187 -----VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASN 241
V CGPG GIS+GSLG+ V +TVR+ T GVR+KTW G
Sbjct: 339 VYIHNVNCGPGHGISIGSLGRDNTKACVSNITVRDVVMHNTMTGVRIKTWQGGS-GSVQG 397
Query: 242 FTFEDIVMNNVENPIVIDQLYCPYNKC 268
F +I ++ V+ PIVIDQ YC + C
Sbjct: 398 VLFSNIQVSEVQLPIVIDQFYCDKSTC 424
>gi|89145851|gb|ABD62081.1| putative style polygalacturonase [Turnera subulata]
Length = 473
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 125/307 (40%), Gaps = 72/307 (23%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGP-CKAS 84
NV D+GA DG TDD+ A+ + + A + +LVP G + V F G C A+
Sbjct: 88 FNVLDYGAKGDGHTDDTNAWTDAGKVA------RSKILVPAGSVFFVGPVSFLGSGCGAN 141
Query: 85 ISFQLQG-----------------LLDLFSIDTSLSLAKGTFHGQGETAWP--------- 118
I QL G ++ ++ KGT G+G W
Sbjct: 142 IELQLDGTILAPVSSKIWGSGLLQWIEFKELNGFTIQGKGTIDGRGSVWWNDLPSYGSEW 201
Query: 119 ----LNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA 174
NQ PT +RF T+TGI +S H+ C ++++D ++
Sbjct: 202 ESEVGNQLDGKMPSTKPTALRFYGSTGVTVTGITIQNSPQTHLKFDSCTGVQVSDFTTSS 261
Query: 175 ----------HADSSKDILV------------------SEVF-----CGPGQGISVGSLG 201
H +S+++L+ S VF CGPG GIS+G LG
Sbjct: 262 PGNSPNTDGIHLQNSQNVLIYSSDLACGDDCISIQTGCSNVFIHNVNCGPGHGISIGGLG 321
Query: 202 KGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQL 261
K V +TVR+ + T GVR+KTW G TF ++ ++ V PI+IDQ
Sbjct: 322 KDNTKACVSNVTVRDVSMHNTLTGVRIKTWQGGS-GSVQGITFSNVQVSGVGTPIMIDQF 380
Query: 262 YCPYNKC 268
YC + C
Sbjct: 381 YCDGSIC 387
>gi|242063922|ref|XP_002453250.1| hypothetical protein SORBIDRAFT_04g002530 [Sorghum bicolor]
gi|241933081|gb|EES06226.1| hypothetical protein SORBIDRAFT_04g002530 [Sorghum bicolor]
Length = 520
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 137/303 (45%), Gaps = 60/303 (19%)
Query: 17 VRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFA 75
++G A V+NV+ FGA DG DD++AF ++W+ A + D LVP G +Y V
Sbjct: 94 MQGKGACRNVVNVESFGAAGDGDADDTQAFASAWKTACSLD--NPVFLVPAGRRYKVGAI 151
Query: 76 EFEGPCKAS-ISFQLQGLL--------------DLFSIDTSLSLAK----GTFHGQGETA 116
+F GPCK + + Q+QG + L+ + + L+ A+ G G G +
Sbjct: 152 QFLGPCKDNRMIIQIQGTIVAPEEPSEWDPQSPRLWLLFSGLAGARIQGGGVIDGSG-SK 210
Query: 117 WPLNQC--HKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKIT 173
W N C +K++ C+ PT + + + G++ +++ H+ + +++ L+I
Sbjct: 211 WWANSCKINKSNPCRGAPTAVTIDSCRGVRVRGLRVRNAQQMHVTVSRSRGVRVGGLRID 270
Query: 174 AHADS---------------------------------SKDILVSEVFCGPGQGISVGSL 200
A DS S + + + CGPG GIS+GSL
Sbjct: 271 APEDSPNTDGIHVADSTAVTIQSCRIGTGDDCISIVNGSFGVKMRNIDCGPGHGISIGSL 330
Query: 201 GKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQ 260
GKG V + + NGVR+KTW G F ++ M+ V++PIVIDQ
Sbjct: 331 GKGGAFAAVADVALDGARIRRAQNGVRIKTW-QGGAGYVRGVRFANVDMDGVDHPIVIDQ 389
Query: 261 LYC 263
YC
Sbjct: 390 FYC 392
>gi|449464134|ref|XP_004149784.1| PREDICTED: exopolygalacturonase clone GBGE184-like [Cucumis
sativus]
Length = 455
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 60/85 (70%)
Query: 178 SSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIG 237
S+++I V+ V CGPG G+SVGSLGK K++ V + V+NCT +NG R+KTW G
Sbjct: 360 STENITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPVSG 419
Query: 238 IASNFTFEDIVMNNVENPIVIDQLY 262
+AS FEDIVM NV+NPI+IDQ Y
Sbjct: 420 LASRIIFEDIVMYNVKNPIIIDQTY 444
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKA-S 84
V +V GA A+G TDD++AF T+W A L+P G +LV F GPCK+
Sbjct: 83 VFDVTKHGAKANGKTDDAQAFMTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSFP 142
Query: 85 ISFQLQGLL------------DLFSID--TSLSL-AKGTFHGQGETAWPLNQCHKNSDCQ 129
I+ + QG + + FSI+ T L G F GQG + WP N C KN+ CQ
Sbjct: 143 ITLENQGTVKATTDISAYSSPEWFSIEDITGFILTGSGVFDGQGLSVWPYNDCKKNNLCQ 202
Query: 130 L 130
L
Sbjct: 203 L 203
>gi|302796826|ref|XP_002980174.1| hypothetical protein SELMODRAFT_112735 [Selaginella moellendorffii]
gi|300151790|gb|EFJ18434.1| hypothetical protein SELMODRAFT_112735 [Selaginella moellendorffii]
Length = 456
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 137/313 (43%), Gaps = 74/313 (23%)
Query: 19 GIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK--YLVSFAE 76
G +TN + +V FGA DG+TDD+ AF +W +A ++ +++ P +LV
Sbjct: 62 GYYSTN-IYDVLSFGAKGDGVTDDTHAFLAAWNQACK---VESSMVEVPANFVFLVKPLV 117
Query: 77 FEGPCKASISFQLQGLL---------DLFSIDTSLSLAK-----------GTFHGQGETA 116
F GPC+ ++ FQ+ G + + S+ + A+ G +G G
Sbjct: 118 FSGPCQNNLVFQVDGTIVAPTSAKAWNGTSLLQWIEFARVHGLLLQGSCTGAINGNGPAW 177
Query: 117 WPLNQCHKNSDCQLPTP-----IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLK 171
W NS C+ +P +RF ++ + + V+S H+ C + +N++
Sbjct: 178 W-------NSSCKAKSPALAQAVRFFGSSNVVVQHLAIVNSPQTHLKFDSCQGVVVNNVT 230
Query: 172 IT------------------AHADSSK-----------------DILVSEVFCGPGQGIS 196
I+ A SS+ +I + ++ CGPG GIS
Sbjct: 231 ISSPYTSPNTDGIHLQDTRYAAVRSSRVLCCAGDDCVSIQTGCSNIEIFDMMCGPGHGIS 290
Query: 197 VGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPI 256
+G LG+G V ++V + + NGVR+KTW G S+ F +I + NV NPI
Sbjct: 291 IGGLGRGGTKACVSDVSVHDVVVHTSQNGVRIKTWQGGS-GSVSSVHFHNIAVLNVSNPI 349
Query: 257 VIDQLYCPYNKCN 269
VIDQ YC C+
Sbjct: 350 VIDQFYCDGRSCH 362
>gi|1495261|emb|CAA66407.1| polygalacturonase precursor homologue [Arabidopsis thaliana]
Length = 328
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 121/281 (43%), Gaps = 60/281 (21%)
Query: 45 AFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGPCKASISFQLQGLLDL-------- 95
A +W+ A G G V +P G ++LV +GPCK Q++G+L
Sbjct: 1 ALVGAWKAACKVVG--GKVEIPAGTQFLVKAVTLQGPCKEETVVQIEGILVAPEKIGSWP 58
Query: 96 ---------FSIDTSLSL-AKGTFHGQGETAWPLNQCHKNSDCQL-----PTPIRFNFLN 140
F + L++ GT +G+G W L+ + + PT +RF N
Sbjct: 59 NSSLFQWLNFKWVSHLTIQGSGTLNGRGYNWWNLDTYQTQTRNKYIPPMKPTALRFYSSN 118
Query: 141 DSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---------------------- 178
+ T+ I V+S H+ +K+N++ I++ +S
Sbjct: 119 NVTVRDISIVNSPLCHLKFDDSDGVKVNNITISSPENSPNTDGIHLQNTRNVEIQHSNIA 178
Query: 179 -----------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVR 227
S ++ + + CGPG GIS+G LGK V + V + + T GVR
Sbjct: 179 CGDDCVSIQTGSSNVHIHHINCGPGHGISIGGLGKDKSVACVSDIIVEDISIQNTLAGVR 238
Query: 228 VKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
+KTW +G+ N TF +I + +V+ PIVIDQ YC +KC
Sbjct: 239 IKTW-QGGLGVVKNLTFSNIQVKDVKVPIVIDQYYCDKSKC 278
>gi|356502035|ref|XP_003519827.1| PREDICTED: polygalacturonase At1g48100-like [Glycine max]
Length = 462
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 126/302 (41%), Gaps = 63/302 (20%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGPCKASI 85
+V FGA +G++DDS+A +W A TV +P K+L+ +GPC +
Sbjct: 65 FDVLAFGAKGNGVSDDSEALLAAWNGACKVAA--ATVKIPAQFKFLMKPVTLQGPCMPDL 122
Query: 86 SFQLQGLL------------DLFS------IDTSLSLAKGTFHGQGETAWPLNQCH---- 123
+ Q+ G L LF + + GT GQG W ++ +
Sbjct: 123 TLQIDGTLLAPSEASSWPQSSLFQWINFKWVQNFTIIGSGTVDGQGYNWWSSSEFYDMQK 182
Query: 124 ---KNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA------ 174
K+ PT IRF N T+ I+ ++S H+ +K+N++ I++
Sbjct: 183 TYSKHIPSIKPTAIRFYSSNFVTVRDIRIINSPLCHLKFDNSKGIKVNNITISSPENSPN 242
Query: 175 ----HADSSKDI-----------------------LVSEVFCGPGQGISVGSLGKGIKDE 207
H +++D+ V + CGPG GIS+G LGK
Sbjct: 243 TDGIHLQNTQDVEIQRSIISTGDDCVSIQTGCSNVHVHHINCGPGHGISLGGLGKDKTSA 302
Query: 208 EVVG-LTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYN 266
V +TV + + T G R+KTW IG+ N TF I + +V PI+IDQ YC
Sbjct: 303 ACVSDITVEDISMKNTLFGARIKTW-QGGIGMVKNVTFSRIQVYDVMYPIMIDQYYCDKE 361
Query: 267 KC 268
C
Sbjct: 362 IC 363
>gi|242052857|ref|XP_002455574.1| hypothetical protein SORBIDRAFT_03g013330 [Sorghum bicolor]
gi|241927549|gb|EES00694.1| hypothetical protein SORBIDRAFT_03g013330 [Sorghum bicolor]
Length = 548
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 125/315 (39%), Gaps = 90/315 (28%)
Query: 43 SKAFDTSWREAWNWDGIKGTVLVPP-GKYLVSFAEFEGPCKASISFQLQGLLD------- 94
+ AF +W+ A + D T+LVP G + ++ F GPCK ++FQ+ G+L
Sbjct: 137 TPAFRAAWKAACSSDSATATLLVPSDGVFTITSTIFSGPCKPDLTFQIDGVLMPPDGPAS 196
Query: 95 -----------LFSIDTSLSLA-KGTFHGQGETAWPLN-QCHKNSD-------CQLPTPI 134
+F L+LA +GT G GE W L + H+ + C P I
Sbjct: 197 WPATDSRKQWIVFYKADRLTLAGEGTIEGNGEEWWDLPCKPHRGPNGSTLPGPCDSPALI 256
Query: 135 RFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSS--------------- 179
RF ND T+ G++ +S FH+ C ++++ L +++ A S
Sbjct: 257 RFFLSNDVTVCGLRIENSPQFHLRFDDCERVRVDGLFVSSPASSPNTDGVHVENTTSVQI 316
Query: 180 ------------------KDILVSEVFCGPGQGI-------------------------- 195
D+ V + CG G GI
Sbjct: 317 LNSRIYNGDDCVSIGAGCSDVHVENITCGHGHGIRYLSVSHSATCFHGGTSPDAAKLCSH 376
Query: 196 --SVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVE 253
S+GSLG V +TVRN + NG+R+KTW G + F + M NV+
Sbjct: 377 RRSIGSLGVHNTHACVSNITVRNARILDSDNGLRIKTW-QGGTGAVTAVEFAGVQMQNVK 435
Query: 254 NPIVIDQLYCPYNKC 268
+ IVIDQ YC + C
Sbjct: 436 SCIVIDQYYCLGHGC 450
>gi|449529002|ref|XP_004171490.1| PREDICTED: polygalacturonase ADPG1-like, partial [Cucumis sativus]
Length = 271
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 78/135 (57%), Gaps = 8/135 (5%)
Query: 176 ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSH 235
D S I +S++ CGPG GIS+GSLGK E+V + V++ TFT T+NGVR+KTW
Sbjct: 136 GDGSYRINISKIACGPGHGISIGSLGKHGDHEKVEFIHVKDVTFTDTTNGVRIKTWQGGS 195
Query: 236 IGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNIEIGNRNLVYNGVNVKV 295
G A N FE IV NPI+IDQ YC + KC K+ +++ N++YN V+
Sbjct: 196 -GYARNIIFEGIVSRGSLNPIIIDQFYCDHEKC----KNQTSAVKVS--NVLYNRVSGTS 248
Query: 296 EGPETTSL-CSNVKP 309
+ +L CS +P
Sbjct: 249 KSKIAVNLACSETEP 263
>gi|242088671|ref|XP_002440168.1| hypothetical protein SORBIDRAFT_09g027160 [Sorghum bicolor]
gi|241945453|gb|EES18598.1| hypothetical protein SORBIDRAFT_09g027160 [Sorghum bicolor]
Length = 423
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 119/289 (41%), Gaps = 59/289 (20%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPP-GKYLVSFAEFEGPCKAS 84
+L + DFGAV DG+ DD+KA +W A G + VP G + + GPC++
Sbjct: 28 LLTLHDFGAVGDGVADDTKALADAWTAACT-AGDNVILNVPAAGTFQIWPLTLAGPCRSE 86
Query: 85 ISFQLQGLLDLFSIDTSLSLAKGT------FH--------------GQGETAWPLNQCHK 124
I + G D+ + ++ +G FH G+G+ W Q
Sbjct: 87 IKLLISG--DIVAPESPSDWGQGQRSQWLHFHKVQDLKITGGGIIDGRGQQWWA--QSSL 142
Query: 125 NSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------ 178
P + F ++ GI +S+ +H+ N++ N L++T+ DS
Sbjct: 143 MGAQPAPKAVHFEDCQGISVKGITLQNSQSYHLTFTRSSNVEANYLRVTSPEDSIDTKGI 202
Query: 179 ---------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVG 211
+D+ + + CGPG GIS+G+LG + V
Sbjct: 203 HLVDSFNVHVMDNLISTGDDCVSIVGNCEDVRLRAISCGPGHGISIGTLGVNNSVDYVEK 262
Query: 212 LTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQ 260
+ V + T NGVRV+T G A FE IVM NV NPI++DQ
Sbjct: 263 IKVDTLFISNTKNGVRVRTTRSGGGGFARKVKFESIVMRNVTNPIIVDQ 311
>gi|297849410|ref|XP_002892586.1| hypothetical protein ARALYDRAFT_471186 [Arabidopsis lyrata subsp.
lyrata]
gi|297338428|gb|EFH68845.1| hypothetical protein ARALYDRAFT_471186 [Arabidopsis lyrata subsp.
lyrata]
Length = 381
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 116/286 (40%), Gaps = 81/286 (28%)
Query: 63 VLVPPG-KYLVSFAEFEGP-CKASISFQLQGLL-----------------DLFSIDTSLS 103
+LVPP YLV F GP C+A+I FQL G + D +
Sbjct: 2 MLVPPEYTYLVGPISFSGPYCQANIVFQLDGTIIAPTDSKTWGKGLMWWIDFTKLKGIKV 61
Query: 104 LAKGTFHGQGETAW---------------PLN-QCHKNSDCQL------------PTPIR 135
KG G+G W PLN H+N + PT +R
Sbjct: 62 QGKGVIDGRGSGWWQQDDPFSDGETKLIIPLNNSVHQNPPMPIRSELDGRMPSTKPTALR 121
Query: 136 FNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----------SKDIL-- 183
F+ +TGI +S H+ C + ++D+ +++ DS ++D+L
Sbjct: 122 FSGSLGVEVTGITIQNSPQCHLKFDDCLGVVVHDIAVSSPGDSPNTDGIHLQNTRDVLIH 181
Query: 184 ---------------------VSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCT 222
V V CGPG GIS+GSLGK V +TVR+ T
Sbjct: 182 STTLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKEGTKACVSNITVRDVAMHNT 241
Query: 223 SNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
GVR+KTW +G F +I +N V+ PI+IDQ YC ++KC
Sbjct: 242 MTGVRIKTW-QGGVGSVKGIIFSNIQLNEVQIPIMIDQFYCDHSKC 286
>gi|356498200|ref|XP_003517941.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase
At3g15720-like [Glycine max]
Length = 403
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 123/289 (42%), Gaps = 69/289 (23%)
Query: 31 DFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKASI-SFQ 88
D G + + D +AF +WR+A N T+L+P K +++ F G CK I +
Sbjct: 68 DAGPSFNSVID--QAFLKAWRDARNASHGSPTLLIPKEKTFMLQPVLFRGRCKPPIVHIK 125
Query: 89 LQGLLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDST----- 143
L+G + + L K T AW IRF + DS
Sbjct: 126 LKGTIIAPNKIGLXKLPKST-----RKAW----------------IRFRHIRDSLHFREC 164
Query: 144 ----ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--------------------- 178
++G+ ++S HI+I+ C N +++L + A +S
Sbjct: 165 DNLFLSGLIHLNSPKNHISIIRCNNSLISNLHMIAPNESPNTDENVISHSSNISIKNSKM 224
Query: 179 ------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGV 226
S I + VFC PG GIS+GSLG + V + VRNCTF T+NG
Sbjct: 225 EIGEDCIAINHGSTFISIIGVFCKPGHGISIGSLGXNGAHQTVEEICVRNCTFNRTTNGA 284
Query: 227 RVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPY-NKCNIKPKD 274
R+KTW G A TF+DI + N ++IDQLY P N C ++ D
Sbjct: 285 RIKTWIGGQ-GYARKITFKDIKLVEATNLVIIDQLYNPCDNVCAVRVND 332
>gi|22329095|ref|NP_194964.2| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|332660650|gb|AEE86050.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 354
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 83/191 (43%), Gaps = 39/191 (20%)
Query: 105 AKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYN 164
G + GE+ W P +RF + G+ ++S HI IL N
Sbjct: 26 GSGVLNTHGESWWSSVALQSR-----PVAVRFFGCQNILYNGLTQINSPRNHITILDSNN 80
Query: 165 LKLNDLKITAHADS---------------------------------SKDILVSEVFCGP 191
L++L + A A S S +I V+ V CGP
Sbjct: 81 ATLSNLHLIAPASSPNTDGIDISHSQNINIMSSTIKTGDDCVAIKRNSYNINVTYVTCGP 140
Query: 192 GQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNN 251
G GIS+GSLG+G E V + VR+CTFT T NG R+KTWP G N +EDI + N
Sbjct: 141 GHGISIGSLGEGGASEVVQNVNVRHCTFTGTQNGARIKTWPGGQ-GFVKNILYEDITLIN 199
Query: 252 VENPIVIDQLY 262
PI+IDQ Y
Sbjct: 200 ANFPIIIDQQY 210
>gi|384496095|gb|EIE86586.1| hypothetical protein RO3G_11297 [Rhizopus delemar RA 99-880]
Length = 386
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 93/198 (46%), Gaps = 45/198 (22%)
Query: 107 GTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLK 166
GT +G G+ AW + D PT +RF L DS ++GIK V++ H+ + C N
Sbjct: 117 GTINGNGQ-AW-----YDAEDHTAPTVLRF-ALTDSKVSGIKIVNAPRAHLGVTNCENFV 169
Query: 167 LNDLKITAHADSSK-------------------------------------DILVSEVFC 189
L+++ + + SSK +I +S++ C
Sbjct: 170 LDNITLKTASTSSKLAKNTDALDVSSSSGIVFQNSELTVGDDCLAINGGVTNITLSKITC 229
Query: 190 GPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVM 249
G G SVGSLGKG K E V + +R+ NGVR+KTWP G S+ + +I +
Sbjct: 230 NGGHGFSVGSLGKGGKSETVKTVRIRDSVCNNCQNGVRIKTWPGGK-GAVSDVEYSNIKL 288
Query: 250 NNVENPIVIDQLYCPYNK 267
NNV+NPI+I YC N+
Sbjct: 289 NNVDNPILITTHYCDQNQ 306
>gi|14532456|gb|AAK63956.1| At1g10640/F20B24_8 [Arabidopsis thaliana]
gi|23506077|gb|AAN28898.1| At1g10640/F20B24_8 [Arabidopsis thaliana]
Length = 380
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 116/286 (40%), Gaps = 81/286 (28%)
Query: 63 VLVPPG-KYLVSFAEFEGP-CKASISFQLQGLL-----------------DLFSIDTSLS 103
+LVPP YLV F GP C+A+I FQL G + D +
Sbjct: 1 MLVPPEYTYLVGPISFSGPYCQANIVFQLDGTIIAPTDSKTWGKGLMWWIDFTKLKGIKV 60
Query: 104 LAKGTFHGQGETAWPLNQCHKNSDCQL----------------------------PTPIR 135
KG G+G W + +SD +L PT +R
Sbjct: 61 QGKGVIDGRGSGWWQQDSPFIDSDTKLIVPLNNSANQNPPMPIRSELDERMPSIKPTALR 120
Query: 136 FNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----------SKDILV- 184
F+ +TGI +S H+ C + ++D+ +++ DS +KD+L+
Sbjct: 121 FSGSFGVEVTGITIQNSPQCHLKFDDCVGVVVHDIAVSSPGDSPNTDGIHLQNTKDVLIH 180
Query: 185 -----------------SEVF-----CGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCT 222
S VF CGPG GIS+GSLGK V +TVR+ T
Sbjct: 181 STTLACGDDCISIQTGCSNVFVHNVNCGPGHGISIGSLGKEGTKACVSNITVRDVAMHNT 240
Query: 223 SNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
GVR+KTW +G F +I +N V+ PI I+Q YC ++KC
Sbjct: 241 MTGVRIKTW-QGGVGSVKGIIFSNIQLNQVQIPITINQFYCDHSKC 285
>gi|218185532|gb|EEC67959.1| hypothetical protein OsI_35700 [Oryza sativa Indica Group]
Length = 341
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 76/139 (54%), Gaps = 7/139 (5%)
Query: 177 DSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHI 236
+ S D+L+ V CGPG GIS+GSLG + V +TV+ T+NG+R+KTW ++
Sbjct: 155 EGSSDVLIEAVTCGPGHGISIGSLGDTPEQVAVRNITVKGAALAGTTNGLRIKTWAKANA 214
Query: 237 GIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNIEIGNRNLVYNGVN-VKV 295
G + +F +VM NV NPI++DQ YCP N S ++G+ + +GV+ V
Sbjct: 215 GAVTGVSFSGVVMRNVSNPIIVDQNYCPGNASCPTEARSPETCDLGS-GIEISGVSYTDV 273
Query: 296 EGPETTSL-----CSNVKP 309
EG T+ CS +P
Sbjct: 274 EGTSATATAVRFDCSPSRP 292
>gi|413953936|gb|AFW86585.1| hypothetical protein ZEAMMB73_740672 [Zea mays]
Length = 419
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 106/262 (40%), Gaps = 57/262 (21%)
Query: 62 TVLVPPGK-YLVSFAEFEG--PCKASISFQLQGL------------------LDLFSIDT 100
TVLVP +LV F G C+ ++ FQ+ G L+ S+
Sbjct: 77 TVLVPASYVFLVGPIAFTGGDSCEPNVVFQVDGTILANTGSTAWRSGYATQWLEFKSVRG 136
Query: 101 SLSLAKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINIL 160
G GQG W N Q T +R ++ T+TGI S FH+ +
Sbjct: 137 LTIQGCGVIDGQGSHWWSRNPLVDQG--QTTTALRVYQGDNVTVTGITIRSSPKFHLTLD 194
Query: 161 GCYNLKLNDLKITAHADS---------------------------------SKDILVSEV 187
C ++++ + I + DS D+ + V
Sbjct: 195 TCRAVEVHGVTIASPGDSPNTDGIHLASSVGVSIHHTTIACGDDCVSIQAGCSDVSIRNV 254
Query: 188 FCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDI 247
+CGPG GISVG LGKG V +TV++ TF T GVR+KTW G N F +
Sbjct: 255 YCGPGHGISVGGLGKGGATATVSDVTVQDVTFNHTMTGVRIKTWQGGS-GSVKNVRFSGV 313
Query: 248 VMNNVENPIVIDQLYCPYNKCN 269
++ V+ PIVIDQ YC + C
Sbjct: 314 RVSAVKTPIVIDQYYCDHTACT 335
>gi|217330700|gb|ACK38189.1| unknown [Medicago truncatula]
Length = 254
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 109/254 (42%), Gaps = 61/254 (24%)
Query: 6 RFS--LLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTV 63
+FS ++VSF+ A + VL++ FG + +D A +W+EA +
Sbjct: 2 KFSTVIIVSFLFLADFCAAQSGVLDIAKFGGKPN--SDIGMALTAAWKEACA-STTAAKI 58
Query: 64 LVPPGKYLVSFAEFEGPCKASISFQLQGLLD-----------------LFSIDTSLSLAK 106
++P G Y ++ E +GPCKA I Q+ G + L+ +LS K
Sbjct: 59 VIPAGTYQLNGIELKGPCKAPIELQVDGTIQAPADPSVIKGTEQWFKFLYMDHLTLS-GK 117
Query: 107 GTFHGQGETAWPLNQ-----CHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILG 161
G F GQG + + Q K + + FNF+N+S + G+ S DS+ FH+ + G
Sbjct: 118 GVFDGQGASVYKKAQPAAAWSGKGGNSKNFMNFGFNFVNNSLVHGVTSKDSKNFHVMVFG 177
Query: 162 CYNLKLNDLKITAHADS---------------------------------SKDILVSEVF 188
C N+ + ITA DS SK I V V
Sbjct: 178 CNNITFDSFTITAPGDSPNTDGIHMGKSTGVKILNTNIGTGDDCVSIGDGSKQITVEGVK 237
Query: 189 CGPGQGISVGSLGK 202
CGPG G+S+GSLGK
Sbjct: 238 CGPGHGLSIGSLGK 251
>gi|147667130|gb|ABQ45847.1| polygalacturonase, partial [Citrus unshiu]
Length = 213
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 58/88 (65%)
Query: 179 SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGI 238
+ ++ + V CGPG GIS+GSLGK + V +T + TFT T NGVR+K+W + G
Sbjct: 45 ATNLWIENVACGPGHGISIGSLGKEQQKAGVQNVTATSVTFTGTQNGVRIKSWGRTSSGF 104
Query: 239 ASNFTFEDIVMNNVENPIVIDQLYCPYN 266
A N F+ +MNNV+NPI+IDQ YCP N
Sbjct: 105 ARNILFQHALMNNVDNPIIIDQNYCPDN 132
>gi|223947811|gb|ACN27989.1| unknown [Zea mays]
gi|413948584|gb|AFW81233.1| hypothetical protein ZEAMMB73_645258 [Zea mays]
Length = 421
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 110/269 (40%), Gaps = 62/269 (23%)
Query: 62 TVLVPPG-KYLVSFAEFEGP-CKASISFQLQG---------------LLDLFSIDTSLSL 104
TVLVP G +++V F GP CK +I FQL G LL +
Sbjct: 56 TVLVPSGLEFVVGPISFSGPYCKPNILFQLDGTILAQTSARAWGSAGLLQWLEFTKLTGI 115
Query: 105 A---KGTFHGQGETAWPLNQCHKNSDCQL--------PTPIRFNFLNDSTITGIKSVDSR 153
A G +G+G+ W + D + PT +RF ++ T+ GI V+S
Sbjct: 116 AVQGSGVINGRGQDWWTYADPNDADDESVEMLLPRTKPTALRFYGSSNVTVAGITIVNSS 175
Query: 154 YFHINILGCYNLKLNDLKITAHADSS---------------------------------K 180
H+ C + ++DL +++ DS
Sbjct: 176 QCHLKFDSCEGVMVHDLSVSSPEDSPNTDGIHLQNSRGVDIHHATLACGDDCISIQTGCS 235
Query: 181 DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIAS 240
D+ + V CGPG GIS+G LG+ V +TVR+ T+ GVR+KTW G+
Sbjct: 236 DVNIHSVNCGPGHGISIGGLGRFNTKACVSNVTVRDVKMFRTTTGVRIKTWQGGS-GLVQ 294
Query: 241 NFTFEDIVMNNVENPIVIDQLYCPYNKCN 269
F +I + V+ PI+IDQ YC C
Sbjct: 295 GVRFSNIQVTEVQTPIMIDQFYCDRATCR 323
>gi|238011668|gb|ACR36869.1| unknown [Zea mays]
Length = 421
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 110/269 (40%), Gaps = 62/269 (23%)
Query: 62 TVLVPPG-KYLVSFAEFEGP-CKASISFQLQG---------------LLDLFSIDTSLSL 104
TVLVP G +++V F GP CK +I FQL G LL +
Sbjct: 56 TVLVPSGLEFVVGPISFSGPYCKPNILFQLDGTILAQTSARAWGSAGLLQWLEFTKLTGI 115
Query: 105 A---KGTFHGQGETAWPLNQCHKNSDCQL--------PTPIRFNFLNDSTITGIKSVDSR 153
A G +G+G+ W + D + PT +RF ++ T+ GI V+S
Sbjct: 116 AVQGSGVINGRGQDWWTYADPNDADDESVEMLLPRTKPTALRFYGSSNVTVAGITIVNSS 175
Query: 154 YFHINILGCYNLKLNDLKITAHADS---------------------------------SK 180
H+ C + ++DL +++ DS
Sbjct: 176 QCHLKFDSCEGVMVHDLSVSSPEDSPNTDGIHLQNSRGVDIHHATLACGDDCISIQTGCS 235
Query: 181 DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIAS 240
D+ + V CGPG GIS+G LG+ V +TVR+ T+ GVR+KTW G+
Sbjct: 236 DVNIHSVNCGPGHGISIGGLGRFNTKACVSNVTVRDVKMFRTTTGVRIKTWQGGS-GLVQ 294
Query: 241 NFTFEDIVMNNVENPIVIDQLYCPYNKCN 269
F +I + V+ PI+IDQ YC C
Sbjct: 295 GVRFSNIQVTEVQTPIMIDQFYCDRATCR 323
>gi|449435398|ref|XP_004135482.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
gi|449516643|ref|XP_004165356.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
Length = 467
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 132/308 (42%), Gaps = 75/308 (24%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKY--LVSFAEFEGPCKA 83
+ N+ FGA +G++DDSKA +W+ A I G L P +Y L+ GPC A
Sbjct: 71 IFNILSFGAKGNGVSDDSKALLAAWKAACE---IPGATLEIPSQYKFLIKPITLNGPCMA 127
Query: 84 SISFQLQGL-----------------------LDLFSIDTSLSLAKGTFHGQGETAWPLN 120
Q+ G L F+I S GT +GQG W LN
Sbjct: 128 QFVLQIDGAVLAPPKVSSWPKSSLFQWLNFKWLHNFTIQGS-----GTVNGQGFNWWTLN 182
Query: 121 -------QCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKIT 173
+ SD + PT +RF + T+ I ++S H+ +K++++ I+
Sbjct: 183 NILFLQKKLKHISDMK-PTALRFYSSYNVTVRDITIINSPQCHLKFDNSGTVKIDNITIS 241
Query: 174 A----------HADSSKD-----------------------ILVSEVFCGPGQGISVGSL 200
+ H +++D I + + CGPG GIS+G L
Sbjct: 242 SPENSPNTDGIHLQNTRDVEIQHSNIGCGDDCVSIQTGCSNIHIHHINCGPGHGISLGGL 301
Query: 201 GKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQ 260
GK V + V N + T +GVR+KTW IG N +F +I +++V+ PI+IDQ
Sbjct: 302 GKDKSAACVSNIVVENISIQNTLSGVRIKTW-QGGIGSVKNVSFSNIQVSDVKVPIMIDQ 360
Query: 261 LYCPYNKC 268
YC +KC
Sbjct: 361 YYCDKSKC 368
>gi|125524377|gb|EAY72491.1| hypothetical protein OsI_00348 [Oryza sativa Indica Group]
Length = 300
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 80/168 (47%), Gaps = 34/168 (20%)
Query: 134 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADSSKDIL 183
+RF N+ T+ G+K +S FH C ++++ L I++ H +++ D+L
Sbjct: 109 MRFAISNNVTVRGLKVQNSPEFHFRFDNCNGVRVDGLSISSPALSPNTDGIHVENTSDVL 168
Query: 184 VSE-----------------------VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFT 220
++ V CGPG GIS+GSLGK V +TVRN
Sbjct: 169 ITNTVVSNGDDCVSIGAGTLNVHIENVTCGPGHGISIGSLGKAGTKACVANVTVRNAVIR 228
Query: 221 CTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
+ NGVR+KTW G S FE++ M+ V NPI+IDQ YC C
Sbjct: 229 HSDNGVRIKTWQGGS-GSVSAVAFENVRMDAVRNPIIIDQYYCLSKSC 275
>gi|413943667|gb|AFW76316.1| hypothetical protein ZEAMMB73_878249 [Zea mays]
Length = 245
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 86/167 (51%), Gaps = 34/167 (20%)
Query: 136 FNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----------------- 178
+F+N+ ++G+ ++S++FH+N+ C ++ + D+ +TA DS
Sbjct: 1 MDFVNNGEVSGVTLLNSKFFHMNMYQCKDMLIKDVTVTAPGDSPNTDGIHMGDTSGITIT 60
Query: 179 ----------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCT 222
+ + ++ V CGPG GIS+GSLG+ +++V + V++CT T
Sbjct: 61 NTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKT 120
Query: 223 SNGVRVKTWPDSHIGIA-SNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
+ GVR+K + D+ + S +E++ M + NPI ID +YCP C
Sbjct: 121 TFGVRIKAYEDAASELTVSKIHYENVKMEDSTNPIFIDMMYCPNKLC 167
>gi|449500405|ref|XP_004161089.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase At1g48100-like
[Cucumis sativus]
Length = 423
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 83/172 (48%), Gaps = 34/172 (19%)
Query: 131 PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----------SK 180
PT +RF ++T+TGI +S H+ C + ++D+ +++ DS SK
Sbjct: 158 PTALRFYGSFNATVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSK 217
Query: 181 DILVSE-----------------------VFCGPGQGISVGSLGKGIKDEEVVGLTVRNC 217
D+L+ V CGPG GIS+GSLGK V +TVR+
Sbjct: 218 DVLIHSTSLSCGDDCVSIQTGCSNIYIHNVNCGPGHGISIGSLGKDHTKACVSNITVRDV 277
Query: 218 TFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCN 269
T T NGVR+KTW G N F +I M+ V+ PIVIDQ YC KC+
Sbjct: 278 TMHDTMNGVRIKTWQGGS-GSVQNVLFSNIQMSEVQLPIVIDQFYCDKAKCS 328
>gi|62733048|gb|AAX95165.1| endopolygalacturonase [Oryza sativa Japonica Group]
Length = 389
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 97/232 (41%), Gaps = 49/232 (21%)
Query: 68 GKYLVSFAEFEGPCKA-SISFQLQG-------------LLDLFSIDTSLSLAKGTFHGQG 113
G YLVS A F GPC++ +++ + G L +F +S+A GT G+G
Sbjct: 77 GVYLVSRARFAGPCRSGAVAVNMTGATVVAPVPYAGVQLWIVFQDVDGVSVAGGTLDGRG 136
Query: 114 ETAWPLNQCHKNSDCQLPT-PIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKI 172
W + + DC T + + + G+ S DS HI + + + D +
Sbjct: 137 RALWACRRARR-PDCPPATRSLTIYRSRNVAVRGLTSRDSAGIHITVQASAGVAIVDTVV 195
Query: 173 TAHADS---------------------------------SKDILVSEVFCGPGQGISVGS 199
+A S S D+L+ V CGPG GIS+GS
Sbjct: 196 SAPGRSPNTDGIHIKQSTGVTVRNAVIGTGDDCVSMVEGSSDVLIEAVTCGPGHGISIGS 255
Query: 200 LGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNN 251
LG + V +TV+ T+NG+R+KTW ++ G + +F +VM N
Sbjct: 256 LGDTPEQVAVRNITVKGAALAGTTNGLRIKTWAKANAGAVAGVSFSGVVMRN 307
>gi|222618338|gb|EEE54470.1| hypothetical protein OsJ_01569 [Oryza sativa Japonica Group]
Length = 760
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 124/302 (41%), Gaps = 67/302 (22%)
Query: 26 VLNVKDFGAVADGIT--DDSKAFDTSWREAWNWDGIKGTVLVPP-GKYLVSFAEFEGPCK 82
V +V+ FGA +G + D++AF +W+ A + + TVLVP G + ++ F GPCK
Sbjct: 345 VFDVRAFGATGNGSSADGDTRAFRAAWKAACSAE--SATVLVPSDGVFTITSTIFAGPCK 402
Query: 83 ASISFQLQGLLD-------------------LFSIDTSLSLAKGTFHGQGETAWPLN-QC 122
++FQ+ G+L + D KGT G GE W L +
Sbjct: 403 PGLTFQIDGVLMPPDGPASWPAADGRRQWIVFYRADGMTLSGKGTIEGNGEEWWNLPCKP 462
Query: 123 HKNSD-------CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH 175
H+ + C+ P I+F +D ++ G++ +S FH+ GC + ++ L +++
Sbjct: 463 HRGPNGSTLPGPCESPALIKFVASSDVSVQGLRMENSPQFHLKFDGCSRVLVDGLVVSSP 522
Query: 176 ADSS---------------------------------KDILVSEVFCGPGQGISVGSLG- 201
A S + V V C G GIS+G LG
Sbjct: 523 ASSPNTDGVHVENTSSVRILNSRISNGDDCVSIGGGCSGVRVENVTCVHGHGISIGGLGA 582
Query: 202 KGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQL 261
+G + R + GVR+KTW G S F+ + M NV IVID
Sbjct: 583 RGARACVSNVTRARRARRRTPTTGVRIKTW-QGGAGSVSGVVFDAVQMVNVRGCIVIDPY 641
Query: 262 YC 263
YC
Sbjct: 642 YC 643
>gi|15220066|ref|NP_178131.1| pectin lyase-like protein [Arabidopsis thaliana]
gi|332198241|gb|AEE36362.1| pectin lyase-like protein [Arabidopsis thaliana]
Length = 336
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 116/258 (44%), Gaps = 63/258 (24%)
Query: 61 GTVLVPPGK-YLVSFAEFEGPC-KASISFQLQGLLDLFS--------------------I 98
G+V VP GK +L++ F GPC + F + G + S +
Sbjct: 2 GSVNVPAGKVFLLNSLHFTGPCIPKPLLFIIDGEMIAQSDPQKWGNGENGVIPWLIFDQV 61
Query: 99 DTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPTPIR-FNFLNDSTITGIKSVDSRYFHI 157
D + +G GQG++ W + C + P P+ F+ + T+ ++ +S H+
Sbjct: 62 DGLAIVGRGLLDGQGKSWWDI-HCRDH-----PGPMMTFSNCGNVTLKSLRFRNSAQTHV 115
Query: 158 NILGCYNLKLNDLKITA----------HADSSKDILVSE--------------------- 186
++G N+ ++D+KIT+ H SS + ++
Sbjct: 116 LVMGSQNVYIDDIKITSPEASPNTDGIHITSSTAVSINHSDIATGDDCVSIGDQVNNLNV 175
Query: 187 --VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTF 244
+ CGPG G+S+GSLG+G + V + V + FT T+NG R+KTWP G F
Sbjct: 176 TFMNCGPGHGVSIGSLGRGGTEVTVENIRVSHVNFTGTTNGARIKTWPGG-TGYVRGIEF 234
Query: 245 EDIVMNNVENPIVIDQLY 262
DI ++V+NPI+IDQ Y
Sbjct: 235 FDIRFSSVQNPIIIDQFY 252
>gi|413943675|gb|AFW76324.1| hypothetical protein ZEAMMB73_136411 [Zea mays]
Length = 245
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 84/167 (50%), Gaps = 34/167 (20%)
Query: 136 FNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----------------- 178
+F+N+ ++G+ ++S++FH+N+ C ++ + D+ +TA DS
Sbjct: 1 MDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITIT 60
Query: 179 ----------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCT 222
+ + ++ V CGPG GIS+GSLG+ +++V + V++CT T
Sbjct: 61 NTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKT 120
Query: 223 SNGVRVKTWPD-SHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
GVR+K + D + + S +E+I M + NPI ID YCP C
Sbjct: 121 MFGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLC 167
>gi|413950351|gb|AFW83000.1| hypothetical protein ZEAMMB73_048385 [Zea mays]
Length = 436
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 132/334 (39%), Gaps = 82/334 (24%)
Query: 5 ARFSLLVSFITSVRGIDATNRV-LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTV 63
A +LLV+ + +T R L+V FGA +G+TDD++A +W+ A + TV
Sbjct: 6 ASAALLVTCLVVAAAARSTGRTTLSVLSFGAAGNGVTDDAQALVAAWQVACRVP--RATV 63
Query: 64 LVPPG--KYLVSFAEFEGPCKASISFQLQGL------------------------LDLFS 97
LV P ++L+S +GPC A ++ Q+ G L FS
Sbjct: 64 LVLPSGHRFLLSPVTLQGPCSAKLTLQIDGTVLAPPEMGSWPKPRRPLQWLNFKWLQGFS 123
Query: 98 I---------------DTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDS 142
I D L+ F+ Q T H +S PT IRF +
Sbjct: 124 IQGTGAVDGGQQNLDLDMKCCLSITHFYLQTSTG----TGHWHSPGVKPTLIRFYNSFNV 179
Query: 143 TITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----------SKDILVSE------ 186
++ I+ +S H+ +++ ++ I++ DS +KD+ +
Sbjct: 180 SVRNIRISNSPQCHLKFDSSGGIRVKNVTISSPGDSPNTDGIHLQNTKDVEIRSSTIGCG 239
Query: 187 -----------------VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVK 229
V C PG GIS+G LGK V + N GVR+K
Sbjct: 240 DDCVSIQTGCSNVHMKNVVCNPGHGISLGGLGKDNSLACVSDVVAENIVVQNALYGVRIK 299
Query: 230 TWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
TW +G N TF ++ + NV PI IDQ YC
Sbjct: 300 TW-QGGVGSVRNITFSNVRVANVATPIAIDQFYC 332
>gi|224110914|ref|XP_002315680.1| predicted protein [Populus trichocarpa]
gi|222864720|gb|EEF01851.1| predicted protein [Populus trichocarpa]
Length = 378
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 127/295 (43%), Gaps = 58/295 (19%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG--KYLVSFAEFEGPCKAS 84
+V FGA DG++DDSKA +W+ A + G V+ P K+L+ +GPC
Sbjct: 1 FDVLSFGAKGDGVSDDSKALLAAWKAACK---VSGAVVEIPAEFKFLIKPITLQGPCMPH 57
Query: 85 ISFQLQGLL------------DLFS------IDTSLSLAKGTFHGQGETAWPLNQCHKNS 126
+ ++ G+L LF + G GQG W ++ +
Sbjct: 58 LVLEIDGILLSPPRVGAWPKSSLFQWINFKWVHDFTIQGTGKVDGQGSDWWSPSEVYYIQ 117
Query: 127 DCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HA 176
CQ +RF ++ T+ I+ V+S H+ +K++++ I + H
Sbjct: 118 VCQC-RALRFYDSHNVTVRDIEIVNSPQCHLKFDSSSGIKVDNITINSPEMSPNTDGIHL 176
Query: 177 DSSKD-----------------------ILVSEVFCGPGQGISVGSLGKGIKDEEVVGLT 213
++KD I V ++ CGPG GISVG LGK V +
Sbjct: 177 QNTKDVEIQHSNIGCGDDCVSIQTGCSNIHVHDINCGPGHGISVGGLGKDKSVACVSDIV 236
Query: 214 VRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
V + T +GVR+KTW IG N TF +I +++V+ P++IDQ YC C
Sbjct: 237 VEKISLQNTLSGVRIKTW-QGGIGSVKNVTFSNIEVSDVKYPVIIDQFYCDKKTC 290
>gi|147821308|emb|CAN74591.1| hypothetical protein VITISV_041994 [Vitis vinifera]
Length = 415
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 126/305 (41%), Gaps = 53/305 (17%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKY--LVSFAEFEGPCKA 83
+ +V FGA DG++DDSKAF +W A +K + P K+ L+S +GPC+
Sbjct: 79 IFDVPSFGARGDGVSDDSKAFQVTWSAAC---AVKNATIKIPSKFRLLISPITLQGPCEP 135
Query: 84 SISFQLQGL------------------LDLFSIDTSLSLAKGTFHGQGETAWPLN-QCHK 124
+ Q+ G+ ++ ++ + +GT +GQG W + + +
Sbjct: 136 GLVLQIDGMIVAPGGPRMWLKPELLQWINFKNLHDFVIQGRGTINGQGSAWWWITPRILQ 195
Query: 125 NSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSSKDILV 184
N +RF + TI I+ +S H+ C +K L +T ++
Sbjct: 196 NQ------AVRFYSSLNLTIRDIQIQNSPRCHLKFDNCAGVKTLVLTVTQNSLQ------ 243
Query: 185 SEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTF 244
S+G LGK V + V+N T G+R+KTW +G + F
Sbjct: 244 ----------FSIGGLGKDGTLACVSNIVVQNSIMVDTLYGIRIKTW-QGGVGSVKSVIF 292
Query: 245 EDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNIEIGNRNLVYNGVNVKVEGPETTSLC 304
DI ++NV+ PI+IDQ YC C K + N+ YN +N C
Sbjct: 293 XDIEVSNVKVPIMIDQFYCEGGTCRNKTD------AVSLTNITYNQINGTYATQAIHLAC 346
Query: 305 SNVKP 309
S+ P
Sbjct: 347 SDSIP 351
>gi|338930682|emb|CBM42665.1| group 13 grass pollen allergen [Paspalum notatum]
Length = 169
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 76/133 (57%), Gaps = 7/133 (5%)
Query: 179 SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPD-SHIG 237
S I ++ V CGPG GISVGSLG+ +++V + V+ CT TSNGVR+K++ D + +
Sbjct: 1 STGINITGVTCGPGHGISVGSLGRYKDEKDVTDINVKGCTLKKTSNGVRIKSYEDAASVL 60
Query: 238 IASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNIEIGNRNLVYNGVNVKVEG 297
ASN +E+I M +V NPI+ID YCP C K+ + I +++ + +
Sbjct: 61 SASNLHYENIAMEDVANPIIIDMKYCPNKICT---KNGASKVTI--KDVTFKNITGTSST 115
Query: 298 PETTS-LCSNVKP 309
PE S LCS P
Sbjct: 116 PEAVSLLCSEKLP 128
>gi|300681554|emb|CBH32652.1| polygalacturonase precursor, putative,expressed [Triticum aestivum]
Length = 443
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 152/385 (39%), Gaps = 93/385 (24%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
+L++ DFGAV DGI +D++AF +W+ A G + VP G+ Y + GPC+
Sbjct: 32 LLSLDDFGAVGDGIANDTQAFVDAWKSACATGGTT-YLNVPAGRSYQIWPVTLAGPCRGE 90
Query: 85 ISFQL-----------------QGLLDLFSIDTSLSLAKGTF-HGQGETAWPLNQCHKNS 126
I + QG F LSL+ G G+G+ W C ++
Sbjct: 91 IKLLISGNIIAPEDPEEWWDGDQGRWLHFRGVGDLSLSGGGIVDGRGQQWWA-GSC-EDE 148
Query: 127 DCQ-------LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS- 178
+C P + F D ++ GI + + H+ C++++ N L++T+ S
Sbjct: 149 NCTTYRPYDVAPMALHFEGCRDVSVKGITVQNGQRQHLVFTRCHDVEANYLRVTSPEYSP 208
Query: 179 --------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKD 206
S DI V V CGPG GIS+G LG+ +
Sbjct: 209 GTVGVLVVSSTDVHIKHDLFSVGGDCVSIVGNSSDIRVKAVSCGPGLGISIGGLGENQSN 268
Query: 207 EEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYN 266
+ + + + + T NGVR+KT+ + G A F I+M NV NPIVIDQ Y +
Sbjct: 269 DRIHKIKMDTMLLSNTKNGVRIKTYKNG-CGFARKVKFAHIMMRNVANPIVIDQHYYSAS 327
Query: 267 KCNIKPKDSMPNIE-----------------------------IGNRNLVYNGVNVKVEG 297
N PN+ + R L +GVN+K G
Sbjct: 328 NSNRGTPCGTPNVSAVAVEKIKYIDITGTSATERAVTFACSDAMPCRRLYLDGVNLKTAG 387
Query: 298 PETTS-LCSNVKPTLFGKQIPATCV 321
+TS C G +P +C+
Sbjct: 388 GGSTSAYCHQAFGKHVGDVLPESCL 412
>gi|338930680|emb|CBM42664.1| group 13 grass pollen allergen [Paspalum notatum]
Length = 169
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 75/130 (57%), Gaps = 7/130 (5%)
Query: 182 ILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPD-SHIGIAS 240
I ++ V CGPG GISVGSLG+ +++V + V+ CT TSNGVR+K++ D + + AS
Sbjct: 4 INITGVTCGPGHGISVGSLGRYKDEKDVTDINVKGCTLKKTSNGVRIKSYEDAASVLSAS 63
Query: 241 NFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNIEIGNRNLVYNGVNVKVEGPET 300
N +E+I M +V NPI+ID YCP C K+ + I +++ + + PE
Sbjct: 64 NLHYENIAMEDVANPIIIDMKYCPNKICT---KNGASKVTI--KDVTFKNITGTSSTPEA 118
Query: 301 TS-LCSNVKP 309
S LCS P
Sbjct: 119 VSLLCSEKLP 128
>gi|413946315|gb|AFW78964.1| hypothetical protein ZEAMMB73_374088 [Zea mays]
Length = 175
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 78/167 (46%), Gaps = 27/167 (16%)
Query: 181 DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIAS 240
D+ V ++ CGPG GIS+GSLGK + V + V C T T+NGVR+K+W G A
Sbjct: 7 DVRVKDISCGPGHGISIGSLGKNRTTDMVEDVKVDTCLLTNTTNGVRIKSW-QGGTGFAR 65
Query: 241 NFTFEDIVMNNVENPIVIDQLYC--PYNKCNIKPKDSMPNIEIGN--------------- 283
+ FE+IVM NV NPI+IDQ YC P N + +E
Sbjct: 66 DLRFENIVMRNVSNPIIIDQYYCDQPTPCANQTQAVEVRRVEFAGIRGTSATPQAISIAC 125
Query: 284 ------RNLVYNGVNVKVEG---PETTSLCSNVKPTLFGKQIPATCV 321
R+L VN+ +EG T+LC G +P +C+
Sbjct: 126 SDAVPCRDLELANVNLTLEGGGAGRATALCYRASGKSAGTVVPPSCL 172
>gi|38699529|gb|AAR27069.1| endo-polygalacturonase [Ficus carica]
Length = 118
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 57/84 (67%)
Query: 179 SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGI 238
+ ++ + ++ CGPG GIS+GSLGK +K+ V +TV+ TF T NG+R+K+W G
Sbjct: 35 TTNLWIEDIACGPGHGISIGSLGKELKEAGVQNVTVKTATFRGTQNGLRIKSWGRPSSGF 94
Query: 239 ASNFTFEDIVMNNVENPIVIDQLY 262
A N F+ +VM NV+NPI+IDQ Y
Sbjct: 95 ARNILFQHVVMINVQNPIIIDQHY 118
>gi|223950345|gb|ACN29256.1| unknown [Zea mays]
Length = 332
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 96/232 (41%), Gaps = 42/232 (18%)
Query: 78 EGPCKASISFQLQGLLDLFSIDTSLSLAKGTFHGQGETAWPL--------NQCHKNSDCQ 129
+GP + + + + D +GT G GE W L N C
Sbjct: 4 DGPASWPATDSRKQWIVFYKADRLTLAGEGTIEGNGEEWWDLPCKPHRGPNGSTLRGPCD 63
Query: 130 LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADSS 179
P IRF ND T+ G++ +S FH+ C ++++ L +++ H +++
Sbjct: 64 SPALIRFFSSNDVTVCGLRIENSPQFHLRFDDCERVRVDGLFVSSPASSPNTDGVHVENT 123
Query: 180 K-----------------------DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRN 216
K D+ V + CG G GIS+GSLG V +TVRN
Sbjct: 124 KSVQILNSRIYNGDDCVSIGAGCSDVHVENITCGHGHGISIGSLGVHNTHACVSNVTVRN 183
Query: 217 CTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
+ NGVR+KTW G S F + M NV+N IVIDQ YC + C
Sbjct: 184 VRILDSDNGVRIKTW-QGGAGAVSAVEFTGVQMQNVKNCIVIDQYYCLGHGC 234
>gi|224166212|ref|XP_002338901.1| predicted protein [Populus trichocarpa]
gi|222873867|gb|EEF10998.1| predicted protein [Populus trichocarpa]
Length = 293
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 126/274 (45%), Gaps = 57/274 (20%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCK-ASI 85
+V +GA DG TD +KAF +W +A T+ VP G + + F+GPC +I
Sbjct: 25 FSVLSYGATPDGKTDSTKAFAAAWAQACA-STQPATISVPKGSFSLGQVRFQGPCNNRAI 83
Query: 86 SFQLQGLLD---------------LFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQL 130
++ G L +F ++++ GT GQG W C KNS
Sbjct: 84 LVRIDGTLVAPSDYKVIGNAKNWLIFEHVNGVTVSGGTLDGQGAGLW---SC-KNSGKGC 139
Query: 131 P---TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--------- 178
P T + F+ N+ ITG+ S++S+ FHI I GC N+K+ +K++A +S
Sbjct: 140 PRGATSLEFSNSNNIAITGLASLNSQLFHIVINGCQNVKVQGVKVSAAGNSPNTDGIHVQ 199
Query: 179 ------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTV 214
+ + + V CGPG GIS+GSLGK ++ V +TV
Sbjct: 200 SSTGVTILNSRIGTGDDCVSIGPGTSSLWIENVACGPGHGISIGSLGKESQEAGVQNVTV 259
Query: 215 RNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIV 248
+ TFT T NG+R+K+W G A + F+ V
Sbjct: 260 KTTTFTGTENGLRIKSWGRPSNGFARDILFQHAV 293
>gi|226533566|ref|NP_001151374.1| polygalacturonase precursor [Zea mays]
gi|195646264|gb|ACG42600.1| polygalacturonase precursor [Zea mays]
Length = 429
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 119/292 (40%), Gaps = 64/292 (21%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPP--GKYLVSFAEFEGPCKA 83
+L + DFGAV DG+ DD+KA +W A +L P G + + GPC++
Sbjct: 28 LLTLYDFGAVGDGVADDTKALAGAWTAACT--AADNVILNVPAGGTFRIWPLTLAGPCRS 85
Query: 84 SISFQLQGLLDLFSIDTSLSLAKGT------FH--------------GQGETAWPLNQCH 123
I + G D+ + ++ +G FH G+G+ W +
Sbjct: 86 EIKLLISG--DILAPESPQDWGQGQSDQWLHFHKVRDLTVTGGGIIDGRGQQWWAQSLAR 143
Query: 124 KNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA--HADSSK- 180
P + F ++ GI +S+ +H+ +++ N L++T+ H+ +K
Sbjct: 144 TQP---APKAVHFEDCQGISVKGITLQNSQSYHLTFTRSSDVEANYLRVTSPEHSVDTKG 200
Query: 181 ------------------------------DILVSEVFCGPGQGISVGSLGKGIKDEEVV 210
D+ + + CGPG GIS+G+LG + V
Sbjct: 201 IHLVDSYNVHVMDNLISTGDDCVSIVGNCTDVRLRAISCGPGHGISIGTLGVNSSVDYVE 260
Query: 211 GLTVRNCTFTCTSNGVRVKTWPD--SHIGIASNFTFEDIVMNNVENPIVIDQ 260
+ V + NGVRV+T D G A FE IVM NV NPI++DQ
Sbjct: 261 KIKVDTLFISNAENGVRVRTTEDGGGGGGFARKVKFESIVMRNVTNPIIVDQ 312
>gi|28411803|dbj|BAC57278.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 461
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 77/153 (50%), Gaps = 34/153 (22%)
Query: 144 ITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADSSKDILVSE------- 186
+ +K V+S+ I++ C ++K++ L ITA H S+D+ V++
Sbjct: 215 VENLKVVNSQQIQISVEDCTDVKMSRLSITAPETAPNTDGIHITRSRDVQVTDCTIKTGD 274
Query: 187 ----------------VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKT 230
+ CGPG GIS+GSLG + V +TV N T+NG R+KT
Sbjct: 275 DCMSIEDGTKNLHVKNMVCGPGHGISIGSLGDHNSEAHVNNVTVDNVRLYGTTNGARIKT 334
Query: 231 WPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
W G A N F+++VM+NV NPI+IDQ YC
Sbjct: 335 WQGGK-GSAKNIVFQNMVMDNVWNPIIIDQNYC 366
>gi|7959973|gb|AAF71155.1|AF152753_1 polygalacturonase A [Actinidia chinensis]
Length = 171
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 180 KDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIA 239
+ + VS++ CGPG GIS+GSLG G + V + V T+NGVR+KTW G A
Sbjct: 1 RKVRVSDITCGPGHGISIGSLGYGNSEAHVSDVVVNGAKLCGTTNGVRIKTWQGGS-GSA 59
Query: 240 SNFTFEDIVMNNVENPIVIDQLYCPYNK 267
SN F+++ M+NVENPI+IDQ YC +K
Sbjct: 60 SNIKFQNVEMHNVENPIIIDQNYCDQDK 87
>gi|414879283|tpg|DAA56414.1| TPA: putative alcohol dehydrogenase superfamily protein [Zea mays]
Length = 622
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 108/272 (39%), Gaps = 64/272 (23%)
Query: 7 FSLLVSFITSVRGIDAT--NRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVL 64
SLLV +V + A V NV +GA DG+TD + F +W +A + V
Sbjct: 8 LSLLVHLHAAVLFLPAPAGGAVYNVLRYGARPDGVTDAAGPFLRAWADACR-SPLPAAVY 66
Query: 65 VPPGKYLVSFAEFEGPCKA-SISFQLQGL----------------LDLFSIDTSLSLAKG 107
VPPG+YLV A F GPC +++F + G + ++D + G
Sbjct: 67 VPPGRYLVRSATFTGPCHTRAVTFAVAGTVVAPAAYGARGSSGRWITFENMDGLVVAGGG 126
Query: 108 TFHGQGETAWPLNQCHKNSDCQLPTP-IRFNFLNDSTITGIKSVDSRYFHINILGCYNLK 166
T G+G W Q DC PT + D + G++SVDS FH+ +L C+ +
Sbjct: 127 TLDGRGRALWACRQ-RGQRDCPTPTSTLTIANSKDVVVAGLRSVDSELFHVVVLQCHGVT 185
Query: 167 LNDLKITAHADS---------------------------------SKDILVSEVFCGPGQ 193
+ + + A ADS + + + V CGPG
Sbjct: 186 VRGVTVEAPADSPNTDGIHLHMSTHVSVYDARISTGDDCISIGPGNSHLWIERVACGPGH 245
Query: 194 GISVGSLGKGIKDEEVVGLTVRNCTFTCTSNG 225
GI + + EE+ G R TC+ G
Sbjct: 246 GI------RKVPAEELGG---RKAKPTCSRAG 268
>gi|384500306|gb|EIE90797.1| hypothetical protein RO3G_15508 [Rhizopus delemar RA 99-880]
Length = 383
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 100/225 (44%), Gaps = 46/225 (20%)
Query: 80 PCKASISFQLQGLLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFL 139
P +AS FQ Q D GT +G G+ AW + +D PT IRF L
Sbjct: 89 PARAS-KFQGQNHYIQLKGDNVNMYGGGTINGNGQ-AW-----YDAADHTAPTVIRF-AL 140
Query: 140 NDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSSK------------------- 180
+S ++ + V+S H+ + NL L+++ + + SSK
Sbjct: 141 TNSKVSHLNIVNSPRAHMGVTNSKNLVLDNITLKTASTSSKLAKNTDALDVSSSEGIIFQ 200
Query: 181 ------------------DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCT 222
+I ++ + C G G SVGSLGKG K E V + + N + T
Sbjct: 201 NSHLTVGDDCLAINGGVTNITLNNINCNGGHGFSVGSLGKGGKSETVKTVRILNSSCTNC 260
Query: 223 SNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
NGVR+KTWP G S+ + +I +NNV+NPI+I YC N+
Sbjct: 261 QNGVRIKTWPGGK-GSVSDVKYSNIKLNNVDNPIIITTHYCDKNQ 304
>gi|7959971|gb|AAF71154.1|AF152752_1 polygalacturonase A, partial [Actinidia chinensis]
Length = 171
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 180 KDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIA 239
+ + VS++ CGPG GIS+GSLG G + V + V T+NGVR+KTW G A
Sbjct: 1 RKVRVSDITCGPGHGISIGSLGYGNSEAHVPDVVVNGAKLCGTTNGVRIKTWQGGS-GSA 59
Query: 240 SNFTFEDIVMNNVENPIVIDQLYCPYNK 267
SN F+++ M+NVENPI+IDQ YC +K
Sbjct: 60 SNIKFQNVEMHNVENPIIIDQNYCDQDK 87
>gi|125599506|gb|EAZ39082.1| hypothetical protein OsJ_23514 [Oryza sativa Japonica Group]
Length = 321
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 77/153 (50%), Gaps = 34/153 (22%)
Query: 144 ITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADSSKDILVSE------- 186
+ +K V+S+ I++ C ++K++ L ITA H S+D+ V++
Sbjct: 75 VENLKVVNSQQIQISVEDCTDVKMSRLSITAPETAPNTDGIHITRSRDVQVTDCTIKTGD 134
Query: 187 ----------------VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKT 230
+ CGPG GIS+GSLG + V +TV N T+NG R+KT
Sbjct: 135 DCMSIEDGTKNLHVKNMVCGPGHGISIGSLGDHNSEAHVNNVTVDNVRLYGTTNGARIKT 194
Query: 231 WPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
W G A N F+++VM+NV NPI+IDQ YC
Sbjct: 195 WQGGK-GSAKNIVFQNMVMDNVWNPIIIDQNYC 226
>gi|326514730|dbj|BAJ99726.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 434
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 152/383 (39%), Gaps = 92/383 (24%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
+L++ DFGAV DGI +D++A +W+ A G + VP GK Y + GPC+
Sbjct: 36 LLSLDDFGAVGDGIANDTQALVDAWKAACA-AGDNTYLNVPAGKSYQIWPVTLAGPCRGE 94
Query: 85 ISFQL-----------------QGLLDLFSIDTSLSLAKGTF-HGQGETAWPLNQCHKNS 126
I + QG F+ LSL+ G G+G+ W C ++
Sbjct: 95 IKLMISGNIVAPESPEEWADGDQGRWLHFTGVGDLSLSGGGIVDGRGQQWWA-GSC-EDE 152
Query: 127 DCQ-------LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS- 178
+C P + F D ++ GI +S+ H+ CYN++ N L++T+ S
Sbjct: 153 NCTSYRQHEVAPKALHFEDCQDVSVKGITVQNSQREHLVFTRCYNVEANYLRVTSPEYSP 212
Query: 179 --------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKD 206
D+ + + CGPG GIS+G LG+
Sbjct: 213 GTAGVLVVSSTNVHIKDDLFSVGGDCVSIVGNCSDVRLRAISCGPGLGISIGGLGENQTS 272
Query: 207 EEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYN 266
++ + + T NGVRVKT+ + G A F I+M NV NPI+IDQ Y N
Sbjct: 273 HKIEKIKTDTMFISNTKNGVRVKTYENG-CGFARKVKFAQIMMRNVANPIIIDQHYSASN 331
Query: 267 K---CNIKPKDSMPNIEIGN------------------------RNLVYNGVNV-KVEGP 298
+ C P S +E N R L +GVN+ V G
Sbjct: 332 RGTHCG-APNGSAVAVENINYIDITGTSATEQAVTFACSDAMPCRRLYLDGVNLTTVGGG 390
Query: 299 ETTSLCSNVKPTLFGKQIPATCV 321
T++ C G +P +C+
Sbjct: 391 NTSAYCHQAFGKHVGNVLPESCL 413
>gi|296082716|emb|CBI21721.3| unnamed protein product [Vitis vinifera]
Length = 192
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 70/137 (51%), Gaps = 18/137 (13%)
Query: 59 IKGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLLDLFSIDTSLSLAK------------ 106
+ TV++P G Y + GPCKA I+F +QG + +DTS A+
Sbjct: 31 MASTVMIPEGTYALGQITIGGPCKAPINFIVQGTMKA-PVDTSRFKAEAGWIAFQQIDQF 89
Query: 107 -----GTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILG 161
G F+GQG+T W QLP +RFNF+ +S + I S DS+ FHIN+LG
Sbjct: 90 TLFGGGVFYGQGKTVWGRKSPRSAYCNQLPINLRFNFITNSMVNDITSRDSKQFHINLLG 149
Query: 162 CYNLKLNDLKITAHADS 178
C NL ++ I+A +S
Sbjct: 150 CKNLTFYNIAISAPEES 166
>gi|297791315|ref|XP_002863542.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309377|gb|EFH39801.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 346
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 114/261 (43%), Gaps = 71/261 (27%)
Query: 57 DGIKGTVLVPPGK-YLVSFAEFEGPCKASISFQLQGLLDLFSIDTSLSL----------- 104
+G T+LVP + +L+ +F+GPC +S FQ+ G + + D SL L
Sbjct: 5 EGDTKTILVPSSQTFLLQPLQFQGPCGSSPVFQMDGEI-VAPSDESLWLNLDQKSKKWIS 63
Query: 105 ----------AKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRY 154
G+ +G G + W + FN N+ I+GI S DS
Sbjct: 64 FSNVNDLTVVGSGSINGFGSSFWE--------------SLDFNNCNNLKISGITSKDSPR 109
Query: 155 FHINILGC-----YNLKLN-----------DLKITAHADSSK-----------------D 181
HI+I C N++L D+ + + D SK +
Sbjct: 110 NHISIDSCNIVMISNIQLFAPETSPNTDGIDISTSTNVDISKSTIGTGDDCIALNTGCVN 169
Query: 182 ILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASN 241
I ++E+ CGPG GIS+GSLG + +V + V +C F T+NG R+KT G +
Sbjct: 170 INITEIVCGPGHGISIGSLGANGQVAKVENVQVTHCIFNKTTNGARIKTCQGGE-GYVKH 228
Query: 242 FTFEDIVMNNVENPIVIDQLY 262
FE I + + +NPI+IDQ Y
Sbjct: 229 IYFEHITIIDAKNPIIIDQHY 249
>gi|147801585|emb|CAN74551.1| hypothetical protein VITISV_002518 [Vitis vinifera]
Length = 319
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 126/310 (40%), Gaps = 80/310 (25%)
Query: 31 DFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQ 90
++GAV DG TD+S+ + ++ K L S +
Sbjct: 2 NYGAVGDGKTDNSQ--------------VAAKIIASTNKSLFSNNHWL------------ 35
Query: 91 GLLDLFSIDTSLSL-AKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKS 149
LFS L+L GT GQG +W + + ++F + + G+
Sbjct: 36 ----LFSYVKGLTLTGSGTIDGQGAGSW--------QERRGVAALKFYTCPNLVLQGLTH 83
Query: 150 VDSRYFHINILGCYNLKLNDLKITA-HADSSKD--------------------------- 181
++ + HI + C +N++ I+A A + D
Sbjct: 84 INPQKAHIILTKCDGANINNITISAPEAAPNTDGIDIASSNHVQVRNSKIGTGDDCIAIS 143
Query: 182 -----ILVSEVFCGPGQGISVGSLGK-GIKDEEVVG-LTVRNCTFTC-TSNGVRVKTWPD 233
I ++ V CGPG GIS+GSLG G D + V + VR+C FT + GVR+KTW
Sbjct: 144 ARCSFINITXVTCGPGHGISIGSLGDPGSGDFDTVSEVHVRSCNFTGRNTTGVRIKTWQG 203
Query: 234 SHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNIEIGNRNLVYNGVNV 293
G T+EDIV +NV PIVIDQ YCP N C K+ + +++Y +
Sbjct: 204 GE-GEVKKITYEDIVFDNVRYPIVIDQFYCPNNAC----KNHSGTSALAISDVLYTRITG 258
Query: 294 KVEGPETTSL 303
G E SL
Sbjct: 259 TSSGDEVISL 268
>gi|384500308|gb|EIE90799.1| hypothetical protein RO3G_15510 [Rhizopus delemar RA 99-880]
gi|384500309|gb|EIE90800.1| hypothetical protein RO3G_15511 [Rhizopus delemar RA 99-880]
Length = 383
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 95/211 (45%), Gaps = 48/211 (22%)
Query: 107 GTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLK 166
GT +G G+ AW + +D PT +RF N S ++GI V++ H+ + NL
Sbjct: 115 GTINGNGQ-AW-----YDAADHTAPTVLRFGLTN-SKVSGINIVNAPRAHMGVTNSQNLI 167
Query: 167 LNDLKITAHADSSK-------------------------------------DILVSEVFC 189
L+++ + + SS +I ++ + C
Sbjct: 168 LDNITLKTASTSSNLAKNTDALDVSSSQGIIFQNSHLTVGDDCLAINGGVTNITLNNINC 227
Query: 190 GPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVM 249
G G SVGSLGKG K E V + + N + T NGVR+KTWP G S+ + +I +
Sbjct: 228 NGGHGFSVGSLGKGGKSETVKTVRILNSSCTNCQNGVRIKTWPGGK-GSVSDVKYSNIKL 286
Query: 250 NNVENPIVIDQLYCPYNK---CNIKPKDSMP 277
NNV+NPI+I YC N+ CN S+
Sbjct: 287 NNVDNPIIITTHYCDKNQQSYCNGNDASSLS 317
>gi|255579187|ref|XP_002530440.1| polygalacturonase, putative [Ricinus communis]
gi|223530026|gb|EEF31950.1| polygalacturonase, putative [Ricinus communis]
Length = 216
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 179 SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGI 238
+ +I +S V CGPG GISVGSLGK E V + V NCTF T NGVR+KTWP G
Sbjct: 41 TSNINISGVLCGPGHGISVGSLGKNGAYETVEDIHVENCTFNGTQNGVRIKTWPGGS-GY 99
Query: 239 ASNFTFEDIVMNNVENPIVIDQLY 262
A +FE I + +NPI+IDQ Y
Sbjct: 100 ARRISFEQINLIASQNPIIIDQNY 123
>gi|7959975|gb|AAF71156.1|AF152754_1 polygalacturonase B [Actinidia chinensis]
gi|7959977|gb|AAF71157.1|AF152755_1 polygalacturonase B [Actinidia chinensis]
Length = 164
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 180 KDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIA 239
+ + +++ CGPG GIS+GSLG G + V + V T+NGVR+KTW G A
Sbjct: 1 QKVRANDITCGPGHGISIGSLGSGKSEAYVSDVVVNGAKLFGTTNGVRIKTWQGGS-GSA 59
Query: 240 SNFTFEDIVMNNVENPIVIDQLYCPYNK 267
SN TF+++ M+NV NPI+IDQ YC NK
Sbjct: 60 SNITFQNLEMHNVANPIIIDQNYCDQNK 87
>gi|224102451|ref|XP_002312682.1| predicted protein [Populus trichocarpa]
gi|222852502|gb|EEE90049.1| predicted protein [Populus trichocarpa]
Length = 468
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 122/296 (41%), Gaps = 63/296 (21%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG--KYLVSFAEFEGPCKA 83
+ +V FGA DG++DDSKA +W+ A + G V+ P K+L+ +GPC
Sbjct: 81 IFDVLSFGAKGDGVSDDSKALLAAWKAACK---VSGAVVEIPAEFKFLIKPITLQGPCMP 137
Query: 84 SISFQLQGLL------------DLFS------IDTSLSLAKGTFHGQGETAWPLNQCHKN 125
+ ++ G+L LF + G GQG W
Sbjct: 138 HLVLEVDGILLAPPQVGAWPKSGLFQWLNFKWVHDFTIQGTGKLDGQGSAWW------SP 191
Query: 126 SDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------H 175
S +RF ++ T+ IK ++S H+ +K+N++ I + H
Sbjct: 192 SGVYYIQALRFYDSHNVTVRDIKIMNSPQCHLKFDSSSGIKVNNITIDSPENSPNTDGIH 251
Query: 176 ADSSKD-----------------------ILVSEVFCGPGQGISVGSLGKGIKDEEVVGL 212
++KD I V + CGPG GIS+G LGK V +
Sbjct: 252 LQNTKDVEIQHSNIGCGDDCVSIQTGCSNIHVHHINCGPGHGISLGGLGKDKSVACVSDI 311
Query: 213 TVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
V + T +GVR+KTW +G N TF I +++V+ P++IDQ YC C
Sbjct: 312 VVEKISLQNTLSGVRIKTW-QGGVGSVKNVTFSSIEVSDVKYPVIIDQFYCDKKIC 366
>gi|255573961|ref|XP_002527898.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223532673|gb|EEF34455.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 477
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 127/301 (42%), Gaps = 61/301 (20%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGPCKAS 84
+ +V FGA DG++DDSKA +W+ A G TV +P K+L+ +GPC
Sbjct: 82 IFDVLSFGAKGDGVSDDSKALLAAWKAACKVPG--ATVEIPAEFKFLIKPITLQGPCMPH 139
Query: 85 ISFQLQG---------------LLDLFSIDTSLSL---AKGTFHGQGETAWP------LN 120
+ Q+ G L F+ G+ +GQG W +
Sbjct: 140 LVLQIDGTVLAPPEVGSWPKSSLFQWFNFKWVHDFTIQGTGSVNGQGFYWWTPSNVYFIQ 199
Query: 121 QCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA------ 174
+ K+ PT +RF + T+ I+ ++S H+ +K+N++ I++
Sbjct: 200 KRFKHIPDMKPTALRFYASYNVTVRNIEIINSPQCHLKFDNSKGIKVNNITISSPENSPN 259
Query: 175 ----HADSSKD-----------------------ILVSEVFCGPGQGISVGSLGKGIKDE 207
H +++D I V + CGPG GIS+G LGK
Sbjct: 260 TDGIHLQNTQDVEIQHSNIGTGDDCISIQTGCSNIHVHHINCGPGHGISLGGLGKDKSVA 319
Query: 208 EVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
V + V + T G R+KTW +G N +F +I +++V+ PI+IDQ YC +
Sbjct: 320 CVSNIVVEKISLHNTLAGARIKTW-QGGLGSVKNVSFSNIQVSDVKYPIIIDQFYCDKHI 378
Query: 268 C 268
C
Sbjct: 379 C 379
>gi|384490346|gb|EIE81568.1| hypothetical protein RO3G_06273 [Rhizopus delemar RA 99-880]
Length = 382
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 121/291 (41%), Gaps = 62/291 (21%)
Query: 61 GTVLVPPGKY--LVSFAEFEGPCKASISFQ----LQGLLDLFSIDTSLSLAKG------- 107
GTV P G L S E EG I FQ L G F + KG
Sbjct: 54 GTVSFPKGNNYNLKSLIEIEGLKNVKIDFQGKITLSGFDKKFKGKNAYIKIKGDNVHMSG 113
Query: 108 --TFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNL 165
T G G+ AW Q H PT +R + +S + K ++S H+ NL
Sbjct: 114 GGTIDGNGQ-AWYDKQDH-----TAPTVLRM-MVTNSVFSNFKIINSPRAHMGATNSNNL 166
Query: 166 KLNDLKITAHADSSK-------------------------------------DILVSEVF 188
+ ++ + + SSK ++ +S++
Sbjct: 167 VIENVTLKTASKSSKPAKNTDALDISSSSNIIFRNSELNVGDDCTAINGGVTNVTLSKIT 226
Query: 189 CGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIV 248
C G G SVGSLGKG KD+ V + V + T NGVRVKTWP G S+ ++++
Sbjct: 227 CNGGHGFSVGSLGKGGKDDTVKTIRVLDSTCNNCQNGVRVKTWPGGK-GSVSDVIYKNVK 285
Query: 249 MNNVENPIVIDQLYCPYNKCNIKPKDSMPNIEIGNRNLVYNGVNVKVEGPE 299
+NNVENP+++ YC N+ + K++ ++ I + + ++ + V G +
Sbjct: 286 LNNVENPVIVTTHYCDKNQMSYCTKNADRSLSI--KGVTFDNITGSVTGKK 334
>gi|47900290|gb|AAT39158.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|51854308|gb|AAU10689.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 571
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 143/348 (41%), Gaps = 106/348 (30%)
Query: 24 NRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGP-C 81
N V NV DFGA DG+TDD++AF+ +W A + TVLVP +++V F GP C
Sbjct: 131 NTVFNVVDFGARGDGVTDDTQAFEEAWAAACKVEA--STVLVPSELEFVVGPISFSGPYC 188
Query: 82 KASISFQL--------------QGLLDL--FSIDTSLSL-AKGTFHGQGETAWPLNQCHK 124
K +I FQL GLL F+ + +S+ G +G+G+ W + +
Sbjct: 189 KPNILFQLDGTILAQTSTRVWGSGLLQWLEFTKLSGISIQGSGVINGRGQEWWTYSDPND 248
Query: 125 NS-------DCQL-------PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
+ + +L PT +RF ++ T+TGI V+S H+ C + ++DL
Sbjct: 249 DDNDDVDAYNVELEKMPQIKPTALRFYGSSNVTVTGITIVNSSQCHLKFDSCQGVMVHDL 308
Query: 171 KITA----------HADSSKDILV--SEVFCG----------PGQGISVGSLGKGIKDEE 208
I++ H +SK + + S + CG P + G L ++ E
Sbjct: 309 TISSPENSPNTDGIHLQNSKQVSIHHSNLACGNALINSIKAKPTGFRTKGKLKTLVQVSE 368
Query: 209 VV-------------------------------GLTV----RNCTFTCTSN--------- 224
V+ G+++ R T C SN
Sbjct: 369 VIFALCDAGDDCVSIQTGCSDINIHNVNCGPGHGISIGGLGRYNTKACVSNVTVRDVNMF 428
Query: 225 ----GVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
GVR+KTW G+ F +I ++ V+ PI+IDQ YC C
Sbjct: 429 KTMTGVRIKTWQGGS-GLVQGIRFSNIQVSEVQTPIIIDQFYCDRTTC 475
>gi|147795880|emb|CAN65317.1| hypothetical protein VITISV_006410 [Vitis vinifera]
Length = 388
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 115/291 (39%), Gaps = 84/291 (28%)
Query: 61 GTVLVPPGKY--LVSFAEFEGP-CKASISFQLQGLL-----------------DLFSIDT 100
+ +V P +Y LV F GP C+A+I FQL G + + +
Sbjct: 4 ASTIVVPSEYVFLVGPISFSGPYCEANIVFQLDGTIIAPTNAKAWGSGLLWWIEFTKLRG 63
Query: 101 SLSLAKGTFHGQGETAW-----------------PLNQCHK-NSDCQL------------ 130
G G+G W PLN+ K NS +
Sbjct: 64 ITIRGNGVIDGKGSVWWQDSPFDDPVDDEAKLIIPLNRTAKENSPIPINSKLGSKMPSTK 123
Query: 131 PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----------SK 180
PT +RF + T+TGI +S H+ C + + ++ +++ DS SK
Sbjct: 124 PTALRFYGSFNVTVTGITIQNSPQCHLKFDNCMGVSVYEMSVSSPGDSVNTDGIHLQNSK 183
Query: 181 DILV------------------SEVF-----CGPGQGISVGSLGKGIKDEEVVGLTVRNC 217
D+L+ S V+ CGPG GIS+G LG+ V +TVR+
Sbjct: 184 DVLIHATNLACGDDCVSIQTGCSNVYIHNVNCGPGHGISIGGLGRDGTKACVSNITVRDI 243
Query: 218 TFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
T NGVR+KTW G F +I ++ VE PIVIDQ YC KC
Sbjct: 244 IMHNTMNGVRIKTWQGGS-GSVQGVLFSNIQVSEVELPIVIDQFYCDKGKC 293
>gi|218199291|gb|EEC81718.1| hypothetical protein OsI_25336 [Oryza sativa Indica Group]
Length = 185
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 177 DSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHI 236
D +K++ V + CGPG GIS+GSLG + V +TV N T+NG R+KTW
Sbjct: 44 DGTKNLHVKNMVCGPGHGISIGSLGDHNSEAHVNNVTVDNVRLYGTTNGARIKTWQGGK- 102
Query: 237 GIASNFTFEDIVMNNVENPIVIDQLYC 263
G A N F+++VM+NV NPI+IDQ YC
Sbjct: 103 GSAKNIVFQNMVMDNVWNPIIIDQNYC 129
>gi|413943679|gb|AFW76328.1| hypothetical protein ZEAMMB73_146703 [Zea mays]
Length = 198
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 22/181 (12%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNR----VLNVKDFGAVADGITDDSKAFDTSWREAWNW 56
L L A F ++ + IDA ++ GA +G D++KA +W A
Sbjct: 11 LFLLALFCVMHGEKEESKRIDAKASGPGGSFDITKLGASGNGKIDNTKAVQEAWASACG- 69
Query: 57 DGIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLL----------------DLFSIDT 100
D K T+L+P G +LV F GPCK ++ + G L ++ +D
Sbjct: 70 DTGKQTILIPKGDFLVGQLNFTGPCKGDVTIHVDGNLLSTMDLSQYKEHGNWIEILRVDN 129
Query: 101 SLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINI 159
+ KG G G W N C K DC+ LP + +F+N+ ++G+ ++S++FH+
Sbjct: 130 LVITGKGNLDGLGPAVWSKNSCAKKYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMKA 189
Query: 160 L 160
L
Sbjct: 190 L 190
>gi|115471125|ref|NP_001059161.1| Os07g0208100 [Oryza sativa Japonica Group]
gi|113610697|dbj|BAF21075.1| Os07g0208100 [Oryza sativa Japonica Group]
Length = 224
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 177 DSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHI 236
D +K++ V + CGPG GIS+GSLG + V +TV N T+NG R+KTW
Sbjct: 44 DGTKNLHVKNMVCGPGHGISIGSLGDHNSEAHVNNVTVDNVRLYGTTNGARIKTWQGGK- 102
Query: 237 GIASNFTFEDIVMNNVENPIVIDQLYC 263
G A N F+++VM+NV NPI+IDQ YC
Sbjct: 103 GSAKNIVFQNMVMDNVWNPIIIDQNYC 129
>gi|384492930|gb|EIE83421.1| hypothetical protein RO3G_08126 [Rhizopus delemar RA 99-880]
Length = 402
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 112/275 (40%), Gaps = 64/275 (23%)
Query: 61 GTVLVPPGK--YLVSFAEFEGPCKASISFQLQGLLDLFSIDTSLSLAK------------ 106
GTV P GK L S E EG I FQ G ++L D
Sbjct: 74 GTVSFPKGKNYKLNSMIEIEGLKNVKIDFQ--GQINLAPFDKKFKGGNAYIKIRGDNVHL 131
Query: 107 ---GTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCY 163
GT +G G+ + L D PT +R + +S + K +++ H+ +
Sbjct: 132 SGGGTINGNGQAWYDL------QDHTAPTVLRM-MVTNSVFSNFKIINAPRAHMGVTNAK 184
Query: 164 NLKLNDLKITAHADSSK-------------------------------------DILVSE 186
NL + + + + SSK ++ +S+
Sbjct: 185 NLVIEGVTLNTASKSSKPPKNTDALDISSSSGIIFRNSVLNIGDDCTAINGGVTNVTLSK 244
Query: 187 VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFED 246
+ C G G SVGSLGKG KD+ V + V + NGVRVKTWP G S+ + +
Sbjct: 245 ITCNGGHGFSVGSLGKGGKDDSVRTVRVLDSVCNNCQNGVRVKTWPGGK-GSVSDVLYRN 303
Query: 247 IVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNIEI 281
+ +NNVENP+++ YC N+ + K++ ++ I
Sbjct: 304 VQLNNVENPVIVTTHYCDKNQMSYCTKNADSSLSI 338
>gi|356565946|ref|XP_003551196.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Glycine
max]
Length = 293
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 100/257 (38%), Gaps = 85/257 (33%)
Query: 117 WPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 176
+ L Q C P F+FLN I I S DS+ FH+N+LGC N+ + I A A
Sbjct: 61 YKLKQIELKGPCVPPIEFGFDFLNSMIIQDITSKDSKNFHVNVLGCNNITFTNFNIIAPA 120
Query: 177 DS---------------------------------SKDILVSEVFCGPGQGISVGSLGKG 203
S SK I V V CGP GISV GK
Sbjct: 121 TSLNRNEIHIGRSTQVNITNTNIAIGDDCISLGNGSKKINVLNVTCGPRHGISVXRFGK- 179
Query: 204 IKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
NG T D H F+DI M NV NPI+ID+ YC
Sbjct: 180 ------------------YPNG--TTTMIDMH--------FKDIKMVNVMNPIIIDKEYC 211
Query: 264 PYNKC-NIKPKD------SMPNI----------------EIGNRNLVYNGVNVKVEGPET 300
P+N+C N PK + NI ++ ++V + +++K G
Sbjct: 212 PWNQCTNQSPKKIKIRKVTFKNIIGTSATQEGVVLVCSNDVPCEDVVLSDIDLKFNGIIA 271
Query: 301 TSLCSNVKPTLFGKQIP 317
T+ +NVKPT GK +P
Sbjct: 272 TAKLANVKPTTQGKSLP 288
>gi|147782807|emb|CAN63436.1| hypothetical protein VITISV_021123 [Vitis vinifera]
Length = 418
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 104/257 (40%), Gaps = 58/257 (22%)
Query: 69 KYLVSFAEFEGPCKASISFQLQGLL------------DLFS------IDTSLSLAKGTFH 110
K+L+ +GPC + Q+ G L LF + GT
Sbjct: 78 KFLIEPITLQGPCMPRLVLQIDGTLLAPPKVASWPKSSLFQWINFKWLHNFTIQGTGTVD 137
Query: 111 GQGETAWPLNQCH------KNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYN 164
GQG W L+Q H K+ PT +RF D T+ I+ ++S H+
Sbjct: 138 GQGSNWWSLSQIHYIQKRSKDIPNMKPTALRFYASYDVTVCNIRIINSPQCHLKFDNSGR 197
Query: 165 LKLNDLKITA----------HADSSKD-----------------------ILVSEVFCGP 191
+ + ++ I++ H +++D + V + CGP
Sbjct: 198 VNVTNITISSPENSPNTDGIHLQNTQDVEIQHSNIGCGDDCVSIQTGCSNVHVHHINCGP 257
Query: 192 GQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNN 251
G GIS+G LGK V L V N + GVR+KTW IG N +F +I +++
Sbjct: 258 GHGISLGGLGKEKSAACVSNLVVDNISVQNALYGVRIKTW-QGGIGSVKNVSFSNIQVSD 316
Query: 252 VENPIVIDQLYCPYNKC 268
V+ PI+IDQ YC + C
Sbjct: 317 VKVPIMIDQYYCDKHIC 333
>gi|125662100|gb|ABN50044.1| polygalacturonase [Trichosanthes dioica]
Length = 133
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 60/120 (50%), Gaps = 13/120 (10%)
Query: 72 VSFAEFEGPCKASISFQLQGLLD------------LFSIDTSLSLAKGTFHGQGETAWPL 119
VS + GPCK I Q+ G L L ID G F GQG W
Sbjct: 1 VSQSNLRGPCKNPIELQVDGTLQAPIHPKGDGLVILEYIDQLTLSGTGVFDGQGIAGWEK 60
Query: 120 NQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS 178
N CHK C +LP ++FNF+ +S + I S+DS+ FHIN+LGC N+ + ITA +S
Sbjct: 61 NDCHKRKICTKLPMNLKFNFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTITAPENS 120
>gi|125597244|gb|EAZ37024.1| hypothetical protein OsJ_21369 [Oryza sativa Japonica Group]
Length = 429
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 109/285 (38%), Gaps = 48/285 (16%)
Query: 27 LNVKDFGAVADGITDDSKA----FDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCK 82
+V +GAV DG DD+KA DG L G +V+ + C
Sbjct: 65 FSVLQYGAVGDGDKDDTKASVRPRVVGGVRREVVDGGGAGGLSLDGT-IVANTDSGAWCS 123
Query: 83 ASISFQLQGLLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQL------PTPIRF 136
+ +Q L+ S GT GQG W + D PT +R
Sbjct: 124 GN---AVQQWLEFRSCTGLTIQGSGTVDGQGSHWWSGGAPATDIDADRVGTNNRPTALRV 180
Query: 137 NFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSS----------------- 179
+ +TGI +S FH+ C +++ + I + DS
Sbjct: 181 YESTNVAVTGITIQNSARFHLTFDTCRAVEVRGVAIRSPGDSPNTDGIHLAGSVGVSIQN 240
Query: 180 ----------------KDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTS 223
+LV V CGPG GIS+G LGKG V +TV++ + TS
Sbjct: 241 ATVACGDDCVSIQDGCSRVLVRGVTCGPGHGISIGGLGKGGAMAVVSDVTVQDVSLVGTS 300
Query: 224 NGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
GVR+KTW G F + ++ V+ PIVIDQ YC + C
Sbjct: 301 AGVRIKTWQGGS-GSVRGVLFSGVRVSAVKTPIVIDQYYCDHATC 344
>gi|115465629|ref|NP_001056414.1| Os05g0578600 [Oryza sativa Japonica Group]
gi|113579965|dbj|BAF18328.1| Os05g0578600, partial [Oryza sativa Japonica Group]
Length = 312
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 78/171 (45%), Gaps = 34/171 (19%)
Query: 131 PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADSSK 180
PT +RF ++ T+TGI V+S H+ C + ++DL I++ H +SK
Sbjct: 47 PTALRFYGSSNVTVTGITIVNSSQCHLKFDSCQGVMVHDLTISSPENSPNTDGIHLQNSK 106
Query: 181 -----------------------DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNC 217
DI + V CGPG GIS+G LG+ V +TVR+
Sbjct: 107 QVSIHHSNLACGDDCVSIQTGCSDINIHNVNCGPGHGISIGGLGRYNTKACVSNVTVRDV 166
Query: 218 TFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
T GVR+KTW G+ F +I ++ V+ PI+IDQ YC C
Sbjct: 167 NMFKTMTGVRIKTWQGGS-GLVQGIRFSNIQVSEVQTPIIIDQFYCDRTTC 216
>gi|302791651|ref|XP_002977592.1| hypothetical protein SELMODRAFT_417452 [Selaginella moellendorffii]
gi|300154962|gb|EFJ21596.1| hypothetical protein SELMODRAFT_417452 [Selaginella moellendorffii]
Length = 804
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 120/289 (41%), Gaps = 77/289 (26%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGPCKAS 84
V +V FGA+ DG TDDS+AF ++W A TVL P +++ E GPC
Sbjct: 394 VFDVTSFGALGDGETDDSQAFLSAWEAACFVP--SSTVLFPATYSFVIGPVELSGPCADY 451
Query: 85 ISFQLQGL-------------LDLFSIDTSLSLAK----GTFHGQGETAWPLNQCHKNSD 127
I+ ++ G LD + + + L L + G G+G N+ ++
Sbjct: 452 ITLRVDGTIMARDDLSNWNVDLDGWLVFSGLQLFRLTGYGVIDGRGLPNEITNRSSQSVL 511
Query: 128 CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--------- 178
+ + + ++L +K DS+ FH+++ C + + L++ A +DS
Sbjct: 512 LRRSSAVEISYLT------LK--DSQEFHLSVESCNEVYMTGLQVVAPSDSPNTDGIHIV 563
Query: 179 ------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTV 214
S +I + V CGPG G+S+G LGK V G+ V
Sbjct: 564 RSENVYLQDTLIGTGDDCISIQTGSYNIYIERVTCGPGHGVSIGGLGKYDSWACVAGVYV 623
Query: 215 RNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
++ T G+ + FE + MN+V P++I+Q YC
Sbjct: 624 KDLGGT----------------GVVRDVHFESVTMNDVAFPVIINQFYC 656
>gi|215766185|dbj|BAG98413.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 271
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 78/171 (45%), Gaps = 34/171 (19%)
Query: 131 PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADSSK 180
PT +RF ++ T+TGI V+S H+ C + ++DL I++ H +SK
Sbjct: 6 PTALRFYGSSNVTVTGITIVNSSQCHLKFDSCQGVMVHDLTISSPENSPNTDGIHLQNSK 65
Query: 181 -----------------------DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNC 217
DI + V CGPG GIS+G LG+ V +TVR+
Sbjct: 66 QVSIHHSNLACGDDCVSIQTGCSDINIHNVNCGPGHGISIGGLGRYNTKACVSNVTVRDV 125
Query: 218 TFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
T GVR+KTW G+ F +I ++ V+ PI+IDQ YC C
Sbjct: 126 NMFKTMTGVRIKTWQGGS-GLVQGIRFSNIQVSEVQTPIIIDQFYCDRTTC 175
>gi|89145870|gb|ABD62085.1| polygalacturonase precursor [Glycine max]
Length = 338
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 78/171 (45%), Gaps = 34/171 (19%)
Query: 131 PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----------SK 180
PT +RF + T+TGI +S H+ C + ++++ I++ DS SK
Sbjct: 86 PTALRFYGSFNPTVTGITIQNSPQCHLKFDSCNGVMVHNVTISSPGDSPNTDGIHLQNSK 145
Query: 181 DIL-----------------------VSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNC 217
D+L V V CGPG GIS+GSLGK V +TVR+
Sbjct: 146 DVLIYGSTMACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNITVRDV 205
Query: 218 TFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
T NGVR+KTW G F +I ++ VE PIVIDQ YC C
Sbjct: 206 NMHNTMNGVRIKTWQGGS-GSVQGVLFSNIQVSEVELPIVIDQFYCDKRTC 255
>gi|242096358|ref|XP_002438669.1| hypothetical protein SORBIDRAFT_10g024000 [Sorghum bicolor]
gi|241916892|gb|EER90036.1| hypothetical protein SORBIDRAFT_10g024000 [Sorghum bicolor]
Length = 195
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 71/128 (55%), Gaps = 7/128 (5%)
Query: 184 VSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPD-SHIGIASNF 242
++ V CGPG GIS+GSLG+ +++V + V++CT TSNG+R+K + D + + AS
Sbjct: 32 ITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVLTASKI 91
Query: 243 TFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNIEIGNRNLVYNGVNVKVEGPETTS 302
+E+I M + NPI+ID YCP C + ++ +N+ + PE S
Sbjct: 92 HYENIKMEDSSNPIIIDMKYCPNKICTASGASKVTVKDVSFKNVTGTSAS-----PEAVS 146
Query: 303 -LCSNVKP 309
LCS+ P
Sbjct: 147 LLCSDKIP 154
>gi|193230842|gb|ACF16415.1| polygalacturonase [Mangifera indica]
Length = 157
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 190 GPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVM 249
GPG GIS+GSLG V + V + F TSNGVR+KTW G A N TF+ I +
Sbjct: 1 GPGHGISIGSLGARGTSARVQNILVYDSIFKGTSNGVRIKTWQGGS-GSAKNITFDKIRL 59
Query: 250 NNVENPIVIDQLYCPYNKC 268
+V+NPI+IDQ YCP+ C
Sbjct: 60 ESVQNPIIIDQYYCPHRNC 78
>gi|125555354|gb|EAZ00960.1| hypothetical protein OsI_22993 [Oryza sativa Indica Group]
Length = 432
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 119/326 (36%), Gaps = 54/326 (16%)
Query: 27 LNVKDFGAVADGITDDSKA----FDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCK 82
+V +GAV DG DD+KA DG L G +V+ + C
Sbjct: 68 FSVLQYGAVGDGDKDDTKASVRRRVVGGVRREVVDGGGAGGLSLDGT-IVANTDSGAWCS 126
Query: 83 ASISFQLQGLLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQL------PTPIRF 136
+ +Q L+ S GT GQG W + D PT +R
Sbjct: 127 GN---AVQQWLEFRSCTGLTIQGSGTVDGQGSHWWSGGAPATDIDADRVGTNNRPTALRV 183
Query: 137 NFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSS----------------- 179
+ +TGI +S FH+ C +++ + I + DS
Sbjct: 184 YESTNVAVTGITIQNSARFHLTFDTCRAVEVRGVAIRSPGDSPNTDGIHLAGSVGVSIQN 243
Query: 180 ----------------KDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTS 223
+LV V CGPG GIS+G LGKG V +TV++ TS
Sbjct: 244 ATVACGDDCVSIQDGCSRVLVRGVTCGPGHGISIGGLGKGGAMAFVSDVTVQDVFLVGTS 303
Query: 224 NGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNIEIGN 283
GVR+KTW G F + ++ V+ PIVIDQ YC + C + +
Sbjct: 304 AGVRIKTWQGGS-GSVRGVLFSGVRVSAVKTPIVIDQYYCDHATC------ANQTAAVAV 356
Query: 284 RNLVYNGVNVKVEGPETTSLCSNVKP 309
+ Y+G+ CS+ P
Sbjct: 357 SGVAYSGITGTYTQRPVYLACSDAAP 382
>gi|86276858|gb|ABC87913.1| polygalacturonase precursor [Glycine max]
Length = 336
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 102/241 (42%), Gaps = 63/241 (26%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGP 80
+++ V +V+ FGAV DG DD++AF +W+ A D G VL P + +S F GP
Sbjct: 90 SSDCVFDVRSFGAVGDGCADDTRAFGAAWKAACAVD--SGVVLAPENYIFKISSTIFSGP 147
Query: 81 CKASISFQLQGLLD-------------------LFSIDTSLSLAKGTFHGQGETAWPLN- 120
CK + FQ+ G L + +D GT G G+ W L
Sbjct: 148 CKPGLVFQVDGTLMAPDGPNSWPEADSRNQWLVFYRLDQMTLNGTGTIEGNGDKWWDLPC 207
Query: 121 QCHK-------NSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKIT 173
+ H+ + C P IRF ++ + G+K +S FH+ GC + ++ L I+
Sbjct: 208 KPHRGPSGKTLSGPCGSPAMIRFFMSSNLKVNGLKIQNSPQFHMIFNGCQGVLIDKLSIS 267
Query: 174 A----------HADSSK-----------------------DILVSEVFCGPGQGISVGSL 200
+ H ++SK ++ ++ + CGP GIS+GSL
Sbjct: 268 SPKLSPNTDGIHVENSKYVGIYNSMISNGDDCISIGPGSSNVDIAGLTCGPSHGISIGSL 327
Query: 201 G 201
G
Sbjct: 328 G 328
>gi|405779220|gb|AFS18539.1| PG3, partial [Cucurbita pepo subsp. pepo]
Length = 141
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
Query: 177 DSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHI 236
++S I + + CGPG GIS+GSLGK V + + T+NGVR+KTW
Sbjct: 25 NASSGIKMKRISCGPGHGISIGSLGKDNSTGIVTKVVLDTAFLRETTNGVRIKTWQGGS- 83
Query: 237 GIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNI-EIGNRNL 286
G FE++ M NVENPI+IDQ YC + C +P+ S I +I RN+
Sbjct: 84 GYVRAVRFENVRMENVENPIIIDQFYCDHTTC--EPQASAVKISQIMYRNI 132
>gi|13958032|gb|AAK50769.1|AF361321_1 polygalacturonase [Pisum sativum]
Length = 355
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 76/171 (44%), Gaps = 34/171 (19%)
Query: 131 PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----------SK 180
PT +RF T+TGI +S H+ C + ++D+ I++ DS SK
Sbjct: 91 PTALRFYGSYGPTVTGITIQNSPQCHLKFDSCNRVLVHDVSISSPGDSPNTDGIHLQNSK 150
Query: 181 DIL-----------------------VSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNC 217
D+L V V CGPG GIS+GSLGK V +TVR+
Sbjct: 151 DVLIYSSKLACGDDCISIQTGCSNVYVHNVDCGPGHGISIGSLGKDNTRACVSNITVRDV 210
Query: 218 TFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
+ NGVR+KTW G F +I + V+ PIVIDQ YC C
Sbjct: 211 NIHNSMNGVRIKTWQGGS-GSVQGVLFSNIQVTEVQLPIVIDQFYCDKRTC 260
>gi|86276862|gb|ABC87915.1| polygalacturonase precursor [Glycine max]
Length = 336
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 102/241 (42%), Gaps = 63/241 (26%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGP 80
+++ V +V+ FGAV DG DD++AF +W+ A D G VL P + +S F GP
Sbjct: 90 SSDCVFDVRSFGAVGDGCADDTRAFRAAWKAACAVD--SGVVLAPENYIFKISSTIFSGP 147
Query: 81 CKASISFQLQGLLD-------------------LFSIDTSLSLAKGTFHGQGETAWPLN- 120
CK + FQ+ G L + +D GT G G+ W L
Sbjct: 148 CKPGLVFQVDGTLMAPDGPNSWPEADSRNQWLVFYRLDQMTLNGTGTIEGNGDKWWDLPC 207
Query: 121 QCHK-------NSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKIT 173
+ H+ + C P IRF ++ + G+K +S FH+ GC + ++ L I+
Sbjct: 208 KPHRGPSGKTLSGPCGSPAMIRFFMNSNLKVNGLKIQNSPQFHMIFNGCQGVLIDKLPIS 267
Query: 174 A----------HADSSK-----------------------DILVSEVFCGPGQGISVGSL 200
+ H ++SK ++ ++ + CGP GIS+GSL
Sbjct: 268 SPKLSPNTDGIHVENSKYVGIYNSMISNGDDCISIGPGSSNVDIAGLTCGPSHGISIGSL 327
Query: 201 G 201
G
Sbjct: 328 G 328
>gi|89640981|gb|ABD77576.1| polygalacturonase, partial [Opuntia ficus-indica]
Length = 94
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 47/63 (74%)
Query: 176 ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSH 235
D S+ I + V CG G GISVGSLGK ++ VVG+TVRNCT T T+NGVRVKTWP+S+
Sbjct: 32 GDGSQHIYIENVTCGLGHGISVGSLGKYRGEQPVVGITVRNCTLTNTNNGVRVKTWPNSY 91
Query: 236 IGI 238
GI
Sbjct: 92 NGI 94
>gi|224107817|ref|XP_002314612.1| predicted protein [Populus trichocarpa]
gi|222863652|gb|EEF00783.1| predicted protein [Populus trichocarpa]
Length = 382
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 112/288 (38%), Gaps = 84/288 (29%)
Query: 64 LVPPGKY--LVSFAEFEGP-CKASISFQL--------------QGLLDLFSIDTSLSL-- 104
++ P +Y LV F GP C+A+I FQL +GL + +
Sbjct: 1 MIVPAEYVFLVGPISFSGPYCQANIVFQLDGTIIAPTNSNVWGRGLFQWLEFTKLVGITI 60
Query: 105 -AKGTFHGQGETAW-----------------PLN---QCHKNSDCQ----------LPTP 133
+GT G G W PLN Q H + PT
Sbjct: 61 QGEGTIDGSGSVWWQDYPFEDPIDNESEFIVPLNNTAQQHPPMPIRSELSGKMPSIKPTA 120
Query: 134 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----------SKDIL 183
+RF + T+TGI +S H+ C + ++D++ ++ DS SKD+L
Sbjct: 121 LRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDMRTSSPGDSPNTDGIHLQNSKDVL 180
Query: 184 VSE-----------------------VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFT 220
+ V CGPG GIS+G LGK V +TVR+
Sbjct: 181 IHSTDLACGDDCVSIQTGCSNVYIHNVNCGPGHGISIGGLGKDNTKACVSNITVRDVVLH 240
Query: 221 CTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
T GVR+KTW G F +I ++ V+ PIVIDQ YC + C
Sbjct: 241 GTMTGVRIKTWQGGS-GSVQGVLFSNIQVSEVQLPIVIDQFYCDKSIC 287
>gi|323454097|gb|EGB09967.1| hypothetical protein AURANDRAFT_36645 [Aureococcus anophagefferens]
Length = 494
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 100/243 (41%), Gaps = 37/243 (15%)
Query: 59 IKGTVLVPPGKYLVSFAEFEGPCKASISFQLQ-GLLDLFSIDTSLSLAKGTFHGQGETAW 117
I GT+ PP + AE E ++ +++ L+L G G G W
Sbjct: 151 IDGTIRAPPMDRWPARAEPEDETQSPELRRMRYAFLELRRAKRVTVTGSGAVEGSGRAWW 210
Query: 118 PLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD 177
+ + + + P + D +T ++ +S ++H+ +L ++ L L++ +
Sbjct: 211 RVRK--RRPSVRAPVLLLVADSRDVAVTHLRLAESPFYHVVVLRSSSVALRRLRVASPPG 268
Query: 178 S----------SKDILVS--------------------EVFCG---PGQGISVGSLGKGI 204
S ++D+ V EV G G G+S+GSLG+G
Sbjct: 269 SVNTDGIDLLAARDVTVDDCWVDTGDDNVAIKEGCVGVEVRGGTFYKGHGLSIGSLGEGG 328
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
V + + F TSN RVKTW G +N TF D+ + V P+V+DQ YCP
Sbjct: 329 TTASVRDVVLSGVRFVKTSNAARVKTWQGGS-GAVANVTFRDLDVRAVGAPVVVDQFYCP 387
Query: 265 YNK 267
++
Sbjct: 388 ESQ 390
>gi|357485783|ref|XP_003613179.1| Polygalacturonase [Medicago truncatula]
gi|355514514|gb|AES96137.1| Polygalacturonase [Medicago truncatula]
Length = 489
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 126/325 (38%), Gaps = 91/325 (28%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGPCKASI 85
++ FGA +G++DDS+AF +W+ A G T+ VP K+L+ +GPC +
Sbjct: 59 FDIMSFGAKGNGVSDDSEAFLAAWKCACKVSG--ATIKVPEKLKFLIKPITLQGPCMPDL 116
Query: 86 SFQLQGLL------------DLFS------IDTSLSLAKGTFHGQGETAWPLNQCHKNSD 127
+ Q+ G + +LF + GT GQG W ++ + D
Sbjct: 117 TLQIDGTILAPPEVSSWPKSNLFQWINFKWVQNFTIKGYGTIDGQGSNWWSSSKLY---D 173
Query: 128 CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HAD 177
Q IRF N I IK +S H+ +K++++ I++ H
Sbjct: 174 IQ---AIRFYSSNFVKIRDIKIKNSPLCHLKFDNSKGIKVDNITISSPENSPNTDGIHLQ 230
Query: 178 SSKD-----------------------ILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTV 214
+++D I V + CGPG GIS+G LGK V + V
Sbjct: 231 NTQDVEIQHSNIGTGDDCVSIQTGCSNIHVHHIKCGPGHGISLGGLGKDKSVACVSDIIV 290
Query: 215 RNCTFTCTSNGVRVKTW-------------------PDSHI------------GIASNFT 243
+ + T G R+KTW D ++ G+ N +
Sbjct: 291 EDISMKNTLYGARIKTWQYHVKSFTLKVMRSEQMFISDEYLHLTSRFCGVGGNGMVKNVS 350
Query: 244 FEDIVMNNVENPIVIDQLYCPYNKC 268
F I + +V P++IDQ YC C
Sbjct: 351 FSRIKVYDVMYPVMIDQYYCDKQIC 375
>gi|55297004|dbj|BAD68575.1| polygalacturonase PG1-like [Oryza sativa Japonica Group]
gi|55297593|dbj|BAD68939.1| polygalacturonase PG1-like [Oryza sativa Japonica Group]
Length = 423
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 78/172 (45%), Gaps = 34/172 (19%)
Query: 131 PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADSSK 180
PT +RF + + GI V+S H+ C + ++D+ I++ H +SK
Sbjct: 158 PTALRFYGSFNVVVAGITIVNSSQCHLKFDSCQGVMVHDVTISSPENSLNTDGIHLQNSK 217
Query: 181 DILVSE-----------------------VFCGPGQGISVGSLGKGIKDEEVVGLTVRNC 217
D+ + V CGPG GIS+G LG+ V +TVR+
Sbjct: 218 DVSIHHTNLACGDDCVSIQTGCSNINIHNVNCGPGHGISIGGLGRDNTKACVSNVTVRDV 277
Query: 218 TFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCN 269
T GVR+KTW +G+ + F +I ++ V+ PI+IDQ YC C+
Sbjct: 278 NMFRTMTGVRIKTW-QGGLGLVQDVRFSNIQVSEVQTPIIIDQFYCDERTCS 328
>gi|125526990|gb|EAY75104.1| hypothetical protein OsI_03000 [Oryza sativa Indica Group]
Length = 374
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 78/172 (45%), Gaps = 34/172 (19%)
Query: 131 PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADSSK 180
PT +RF + + GI V+S H+ C + ++D+ I++ H +SK
Sbjct: 109 PTALRFYGSFNVVVAGITIVNSSQCHLKFDSCQGVMVHDVTISSPENSLNTDGIHLQNSK 168
Query: 181 DILVSE-----------------------VFCGPGQGISVGSLGKGIKDEEVVGLTVRNC 217
D+ + V CGPG GIS+G LG+ V +TVR+
Sbjct: 169 DVSIHHTNLACGDDCVSIQTGCSNINIHNVNCGPGHGISIGGLGRDNTKACVSNVTVRDV 228
Query: 218 TFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCN 269
T GVR+KTW +G+ + F +I ++ V+ PI+IDQ YC C+
Sbjct: 229 NMFRTMTGVRIKTWQGG-LGLVQDVRFSNIQVSEVQTPIIIDQFYCDERTCS 279
>gi|384500217|gb|EIE90708.1| hypothetical protein RO3G_15419 [Rhizopus delemar RA 99-880]
Length = 383
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 95/225 (42%), Gaps = 46/225 (20%)
Query: 80 PCKASISFQLQGLLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFL 139
P +AS FQ Q D GT +G G+ AW + +D PT IRF L
Sbjct: 89 PARAS-KFQGQNHYIQLKGDNVNMYGGGTINGNGQ-AW-----YDAADHTAPTVIRF-AL 140
Query: 140 NDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSSK------------------- 180
+S ++ V++ H+ NL L+++ + + SSK
Sbjct: 141 TNSKVSHFNIVNAPRAHMGATNSKNLVLDNITLKTASTSSKLAKNTDALDVSSSEGIVFQ 200
Query: 181 ------------------DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCT 222
++ V V C G G SVGSLGKG K E V + + T
Sbjct: 201 NSQLTIGDDCLAINGGVTNLTVYNVICNGGHGFSVGSLGKGGKSETVKMVRISESTCNNC 260
Query: 223 SNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
NG+R+KTWP G S+ + ++ +NNV+NPI+I YC N+
Sbjct: 261 QNGIRIKTWPGGK-GSVSDVKYTNMKLNNVDNPILITTHYCDKNQ 304
>gi|413946317|gb|AFW78966.1| polygalacturonase [Zea mays]
Length = 429
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 119/291 (40%), Gaps = 63/291 (21%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPP--GKYLVSFAEFEGPCKA 83
+L + DFGAV DG+ DD+KA +W A +L P G + + GPC++
Sbjct: 29 LLTLHDFGAVGDGVADDTKALAGAWTAACA--AADDVILNVPAGGTFRIWPLTLAGPCRS 86
Query: 84 SISFQLQGLLDLFSIDTSLSLAKGT------FH--------------GQGETAWPLNQCH 123
I + G D+ + ++ +G FH G+G+ W +
Sbjct: 87 EIKLLISG--DIVAPESPQDWGQGQSDQWLHFHKVRDLTVTGGGIIDGRGQQWWAQSLAR 144
Query: 124 KNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA--HADSSK- 180
P + F ++ GI +S+ +H+ +++ N L++T+ H+ +K
Sbjct: 145 AQP---APKAVHFEDCQGISVKGITLQNSQSYHLTFTRSSDVEANYLRVTSPEHSVDTKG 201
Query: 181 ------------------------------DILVSEVFCGPGQGISVGSLGKGIKDEEVV 210
D+ + + CGPG GIS+G+LG + V
Sbjct: 202 IHLVDSYNVHVMDNLISTGDDCVSIVGNCTDVRLRAISCGPGHGISIGTLGVNSSVDYVE 261
Query: 211 GLTVRNCTFTCTSNGVRVKTWPD-SHIGIASNFTFEDIVMNNVENPIVIDQ 260
+ V + NGVRV+T + G A FE IVM NV NPI++DQ
Sbjct: 262 KIKVDTLFISNAENGVRVRTTENGGGGGFARKVKFESIVMRNVTNPIIVDQ 312
>gi|374376177|ref|ZP_09633835.1| Polygalacturonase [Niabella soli DSM 19437]
gi|373233017|gb|EHP52812.1| Polygalacturonase [Niabella soli DSM 19437]
Length = 437
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 120/306 (39%), Gaps = 75/306 (24%)
Query: 23 TNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCK 82
+ + ++KDFGA+A+ TD++ + A G GTV++PPG YL +F K
Sbjct: 35 SGKKFSIKDFGAIANNSTDNTGVIQQAIDAADKAGG--GTVIIPPGIYLCGPLQF----K 88
Query: 83 ASISFQLQ--GLLDLFSIDTSLSLAK-------------------GTFHGQGETAWPLNQ 121
+S++F++ +L L +D K GT GQG WP
Sbjct: 89 SSLNFRIDSGAVLRLLPMDRYPGGTKSGTDFISGSKLHDVAITGSGTIDGQGAPWWP--- 145
Query: 122 CHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSSKD 181
+K+ + P I I G+ +++ FHI I G + K+T A +S D
Sbjct: 146 AYKDKGVKRPRMIALQNCERLLIRGVTLMNAPMFHIAISGKATNNVTVDKVTVRAPASDD 205
Query: 182 IL----------------------------------------VSEVFCGPGQGISVGSLG 201
L + G G G+S+GS
Sbjct: 206 PLNPSHNTDACDVSGNKILIKDCDISTGDDNFTCGGGTSNVHIQNCKYGYGHGLSIGSYT 265
Query: 202 KGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQL 261
KG V + +C+FT T G+R+K+ D G+ N T+ +I M NV PI+I
Sbjct: 266 KG----GVSNFLIEDCSFTNTECGIRIKSDRDRG-GVVQNLTYRNIKMENVGMPILIYGA 320
Query: 262 YCPYNK 267
Y K
Sbjct: 321 YMAKEK 326
>gi|338930686|emb|CBM42667.1| group 13 grass pollen allergen [Paspalum notatum]
Length = 169
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 74/133 (55%), Gaps = 7/133 (5%)
Query: 179 SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSH-IG 237
S + ++ V CGPG GIS+GSLG+ +++V + V++CT +SNG+R+K + D+ +
Sbjct: 1 STKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKSSNGLRIKAYEDAKSVL 60
Query: 238 IASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNIEIGNRNLVYNGVNVKVEG 297
SN +E++ M + PI+ID YCP C+ + ++ +++ + +
Sbjct: 61 TCSNIHYENVKMEDAGYPIIIDMKYCPNKICS-----ASAGSKVTVKDVTFKDITGTSST 115
Query: 298 PETTS-LCSNVKP 309
PE S LCS+ P
Sbjct: 116 PEAVSLLCSDSTP 128
>gi|338930684|emb|CBM42666.1| group 13 grass pollen allergen [Paspalum notatum]
Length = 169
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 74/133 (55%), Gaps = 7/133 (5%)
Query: 179 SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSH-IG 237
S + ++ V CGPG GIS+GSLG+ +++V + V++CT ++NG+R+K + D+ +
Sbjct: 1 STKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKSTNGLRIKAYEDAKSVL 60
Query: 238 IASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNIEIGNRNLVYNGVNVKVEG 297
SN +E++ M + PI+ID YCP C+ + ++ +++ + +
Sbjct: 61 TCSNIHYENVKMEDAGYPIIIDMKYCPNKICS-----ASAGSKVTVKDVTFKDITGTSST 115
Query: 298 PETTS-LCSNVKP 309
PE S LCS+ P
Sbjct: 116 PEAVSLLCSDSTP 128
>gi|255564240|ref|XP_002523117.1| galacturan 1,4-alpha-galacturonidase, putative [Ricinus communis]
gi|223537679|gb|EEF39302.1| galacturan 1,4-alpha-galacturonidase, putative [Ricinus communis]
Length = 176
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 65/118 (55%), Gaps = 16/118 (13%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
V +V FGA AD TD++ AF +W+EA N VL+P G +++ A F+GPC++ +
Sbjct: 46 VFDVTQFGAKADDKTDNAIAFIKAWKEACN-SKTPAKVLIPKGNFVMGPAVFQGPCQSKV 104
Query: 86 SFQLQGLL----DL----------FSIDTSLSL-AKGTFHGQGETAWPLNQCHKNSDC 128
+F+L G++ DL F T L+L GTF GQGE+AW N C DC
Sbjct: 105 TFELLGIVKATTDLSDYSSPEWISFERITGLTLKGDGTFDGQGESAWKYNDCANTGDC 162
>gi|426204255|gb|AFY12684.1| polygalacturonase 11c, partial [Medicago arabica]
Length = 60
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
Query: 214 VRNCTFTCTSNGVRVKTWPDSHIGIA-SNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK 271
V++CT T T NGVR+KTW D+ I S+ FEDI+MNNV+NP++IDQ YCP+NKC+ K
Sbjct: 2 VKSCTLTATDNGVRIKTWHDAPGTITVSDIHFEDIIMNNVKNPVIIDQEYCPWNKCSKK 60
>gi|384493142|gb|EIE83633.1| hypothetical protein RO3G_08338 [Rhizopus delemar RA 99-880]
Length = 381
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 109/273 (39%), Gaps = 60/273 (21%)
Query: 61 GTVLVPPGK--YLVSFAEFEGPCKASISFQLQGLLDLFSI-------------DTSLSLA 105
GTV P GK L S E +G +I FQ Q L F D
Sbjct: 53 GTVSFPKGKNYKLNSMIEIQGLKNVNIDFQGQITLAPFDSKFKGGSAYIKIKGDNVRLSG 112
Query: 106 KGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNL 165
GT +G G+T W + D PT +R + N S + +++ H+ NL
Sbjct: 113 GGTINGNGQT-W-----YDKEDRTAPTVLRLSVTN-SIFSNFNIINAPRAHMGATNADNL 165
Query: 166 KLNDLKITAHADSSK-------------------------------------DILVSEVF 188
+ + + + SSK ++ +S +
Sbjct: 166 VIEKVTLKTASSSSKPAKNTDALDISSSKNIVFRDSELTIGDDCTAINGGVTNVTLSNIV 225
Query: 189 CGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIV 248
C G G SVGSLGKG + V + V + T NGVRVKTWP G S+ + ++
Sbjct: 226 CNGGHGFSVGSLGKGGATDTVKTVRVLDSTCNNCQNGVRVKTWPGGK-GSVSDVVYRNVK 284
Query: 249 MNNVENPIVIDQLYCPYNKCNIKPKDSMPNIEI 281
+NNVENP+++ YC N+ + K++ ++ I
Sbjct: 285 LNNVENPVIVTTHYCDKNQMSYCTKNADSSLSI 317
>gi|296084980|emb|CBI28395.3| unnamed protein product [Vitis vinifera]
Length = 77
Score = 75.5 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 224 NGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIK 271
NG+RVKTWPDS +A++ FEDI+MNNV NPI+I+Q YCPY++C K
Sbjct: 2 NGIRVKTWPDSPASVATDLHFEDIIMNNVGNPILINQEYCPYDQCQAK 49
>gi|23345319|gb|AAN28730.1| polygalacturonase [Musa acuminata]
Length = 170
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 189 CGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIV 248
CGPG GIS+GSLG + V ++V+N + NGVR+KTW +G S+ +F+ +
Sbjct: 1 CGPGHGISIGSLGMHNSEACVSNVSVKNAVIRNSDNGVRIKTW-QGGMGSVSDISFDTVY 59
Query: 249 MNNVENPIVIDQLYCPYNKC 268
M NV NPI+IDQ YC C
Sbjct: 60 MENVRNPIIIDQYYCLSESC 79
>gi|225217012|gb|ACN85299.1| polygalacturonase precursor [Oryza coarctata]
Length = 152
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 64/130 (49%), Gaps = 18/130 (13%)
Query: 20 IDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEG 79
I +V +V DFGAV DG TD+SK F +W +A G + V+VP G YL+ F G
Sbjct: 14 ITCARQVFDVTDFGAVPDGETDNSKVFVAAWTKARAAPG-RPAVVVPGGDYLLHPVVFRG 72
Query: 80 PCKASISFQLQGL------LDLF----------SIDTSLSLAKGTFHGQGETAWPLNQCH 123
PC+ + ++ G+ LD F ID L GTF G+G + W LN C
Sbjct: 73 PCRGYVEVRVAGVVLAPAGLDAFLGYHEWINFTGIDGLLVTGGGTFDGRGASLWHLNDCP 132
Query: 124 KNSDCQLPTP 133
DC+ P P
Sbjct: 133 IKPDCK-PRP 141
>gi|146295422|ref|YP_001179193.1| galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145408998|gb|ABP66002.1| Galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 447
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 119/308 (38%), Gaps = 83/308 (26%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPC----K 82
LNV+DFGAV +G D++AF + +W G GTV VP G YL + +
Sbjct: 3 LNVRDFGAVGNGQVKDTEAFKKAIEASWEQGG--GTVYVPAGVYLTGPIHLKSNITLYIE 60
Query: 83 ASISFQLQGLLDLFSI----------------------DTSLSLAKGTFHGQGETAWPLN 120
+ + + LD F + + + GT GQGE W L
Sbjct: 61 SGATLKFSNDLDDFPLVYTRWEGEEQEAYSPLIYAENAENIAVVGFGTIDGQGEMWWKL- 119
Query: 121 QCHKNSDCQLPTP--IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS 178
H+N + + P P + F + TI GIK V+S + +N + C N+ ++++KI DS
Sbjct: 120 --HRNKELKYPRPRTVCFYRCKNVTIEGIKIVNSPSWTVNPIECENVTVHNVKIQNPYDS 177
Query: 179 S------------------------------------------KDILVSEVFCGPGQ-GI 195
++I ++ G GI
Sbjct: 178 PNTDGINPESCEGVRISNCYIDVGDDCVTLKSGTEDCKVRIPCENIAITNCIMAHGHGGI 237
Query: 196 SVGS-LGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVEN 254
+GS + G+++ + + NC F T G+R+KT GI + +IVM NV
Sbjct: 238 VIGSEMSGGVRN-----VVISNCIFEGTDRGIRIKT-RRGRGGIVEDIRVSNIVMKNVIC 291
Query: 255 PIVIDQLY 262
P Y
Sbjct: 292 PFAFYMYY 299
>gi|413943671|gb|AFW76320.1| hypothetical protein ZEAMMB73_576403 [Zea mays]
Length = 288
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 20/159 (12%)
Query: 66 PPGKYLVSFAEFEGPCKASISFQLQGLL----------------DLFSIDTSLSLAKGTF 109
P + V F PCK ++ Q+ G L ++ +D + KG
Sbjct: 59 PRAFFFVGQLNFTCPCKGDVTIQVDGNLLATMDLSQYKEHGNWIEILRVDNLVITGKGNL 118
Query: 110 HGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLN 168
GQG W N C K DC+ LP + F+N+ ++G+ ++S++FH+N+ C N+ +
Sbjct: 119 DGQGPAVWSKNSCTKKYDCKILPNSLVMYFVNNGEVSGVTLLNSKFFHMNMYQCKNMLIK 178
Query: 169 DLKITAHADSSKDILVSEVFCGPGQGISVGSLGKGIKDE 207
D+ +TA DS + G GI++ + G+ D+
Sbjct: 179 DVTVTAPGDSPN---TDGIHMGDSSGITITNTVIGVGDD 214
>gi|384490085|gb|EIE81307.1| hypothetical protein RO3G_06012 [Rhizopus delemar RA 99-880]
Length = 385
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 91/210 (43%), Gaps = 48/210 (22%)
Query: 107 GTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLK 166
GT +G G+ AW + D P+ +R NDS I G ++S H+N+ NL
Sbjct: 117 GTINGHGQ-AW-----YDALDHTAPSVLRI-AANDSIIGGFTIINSPRAHLNVTNSTNLV 169
Query: 167 LNDLKITAHADSS-------------------------------------KDILVSEVFC 189
L+D + +++S + ++VS V C
Sbjct: 170 LHDFTLHTVSNNSYLPKNTDALDLYHSSGITFRDSMLTIGDDCVAIKEDVEKVIVSNVTC 229
Query: 190 GPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVM 249
G G S+GSLG G + + V + RN T NGVRVKTW GI + + DI++
Sbjct: 230 RGGHGYSIGSLGIGGRKDYVKHVNFRNSTCIDCENGVRVKTWAGGK-GIVEDINYNDIIL 288
Query: 250 NNVENPIVIDQLYCPYN---KCNIKPKDSM 276
NV+NPI++ YC N CN +S+
Sbjct: 289 QNVDNPILVTTHYCDPNVIEYCNGNDDNSL 318
>gi|449528409|ref|XP_004171197.1| PREDICTED: polygalacturonase At1g48100-like, partial [Cucumis
sativus]
Length = 263
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 75/168 (44%), Gaps = 34/168 (20%)
Query: 134 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADSSK--- 180
IRF ++ + ++ +S FH+ GC + + L I++ H +++K
Sbjct: 2 IRFFMSSNLAVNSLRIQNSPMFHMKFDGCEGVLIEKLSISSPKLSPNTDGIHIENTKGVG 61
Query: 181 --------------------DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFT 220
++ + V CGP GIS+GSLG V +TVRN
Sbjct: 62 IYNSMISNGDDCISIGPGCANVAIEGVTCGPSHGISIGSLGVHNSQACVSNITVRNAVIR 121
Query: 221 CTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
+ NG+R+KTW G S+ FE+I M NV N I++DQ YC C
Sbjct: 122 DSDNGLRIKTWQGGS-GSVSDILFENIQMENVRNCIIVDQYYCLSKDC 168
>gi|449517571|ref|XP_004165819.1| PREDICTED: polygalacturonase At1g48100-like, partial [Cucumis
sativus]
Length = 195
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 181 DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIAS 240
++ + V CGPG GIS+GSLGK V +TVR+ T NGVR+KTW +G
Sbjct: 14 NVYIHNVNCGPGHGISIGSLGKDNTKACVSNITVRDVIMHNTMNGVRIKTW-QGGLGFVQ 72
Query: 241 NFTFEDIVMNNVENPIVIDQLYCPYNKCN 269
F +I ++ V+ PIVIDQ YC KC+
Sbjct: 73 GVLFSNIQVSEVKIPIVIDQFYCDKAKCS 101
>gi|384490093|gb|EIE81315.1| hypothetical protein RO3G_06020 [Rhizopus delemar RA 99-880]
Length = 372
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 181 DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIAS 240
++ VS + C G G SVGSLGKG + V + VR+ T NGVR+KTWP G S
Sbjct: 209 NVTVSNIICNGGHGFSVGSLGKGGSTDVVRQVRVRDSTCNGCENGVRIKTWPGGQ-GSVS 267
Query: 241 NFTFEDIVMNNVENPIVIDQLYCPYN 266
+ + +I++NNV+NPI++ YC N
Sbjct: 268 DVNYNNIILNNVDNPILVTTHYCDPN 293
>gi|125526362|gb|EAY74476.1| hypothetical protein OsI_02367 [Oryza sativa Indica Group]
Length = 382
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 119/305 (39%), Gaps = 73/305 (23%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK 60
+L+A LV+ + A +V FGA +GI DDS+ I
Sbjct: 1 MLIAGAILCLVASTAPAPALSAGRTTFSVSSFGAAGNGIADDSE--------------ID 46
Query: 61 GTVLVPPGKYLVSFAEFEGPCKASISFQLQGLLDLFSIDTSLSLAKGTFHGQG---ETAW 117
G VL PPG + + + P + ++F+ LD F+I GT GQ +
Sbjct: 47 GDVLAPPG--MGYWPKARRPLQW-LNFKW---LDGFTIQ-----GTGTVDGQSTLLRSVS 95
Query: 118 PLN-QCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 176
P N H PT IRF + ++ I+ +S H+ +K+ ++ I++
Sbjct: 96 PANVSQHWYISGVKPTLIRFYSSFNVSVRNIRITNSPQCHLKFDSSGGIKVKNITISSPG 155
Query: 177 DS------------SKDILVSEVFCG---------------------PGQGISVGSLGKG 203
DS DI S + CG PG GIS+G LGK
Sbjct: 156 DSLNTDGIHLQNTRDVDIRSSSIGCGDDCISIQTGCSNVHMKNINCNPGHGISLGGLGKD 215
Query: 204 -----IKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVI 258
+ D + V N + GVR+KTW G N TF ++ + NV PI I
Sbjct: 216 NSLACVSDVFAEHINVENALY-----GVRIKTWQGGK-GTVRNVTFSNVRVANVATPIAI 269
Query: 259 DQLYC 263
DQ YC
Sbjct: 270 DQFYC 274
>gi|157165830|gb|ABV25004.1| polygalacturonase 7 [Oncidium Gower Ramsey]
Length = 393
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 100/248 (40%), Gaps = 36/248 (14%)
Query: 24 NRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGP-C 81
N + NV DFGA DG+TDD+KAF+ +W A + TV +P +L+ F GP C
Sbjct: 86 NSMFNVLDFGAKGDGVTDDTKAFEDAWMSACQVEA--STVQIPSDYTFLIGPISFSGPYC 143
Query: 82 KASISFQLQGLLDLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLND 141
+ +I FQL G T ++ G W I F L
Sbjct: 144 QPNIIFQLDG--------TIVAPTNSKIWSSGLLWW----------------IEFTKLKG 179
Query: 142 STITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSSKDILVSEVFCGPGQGISVGSLG 201
TI G +++ R + + ND I+ + G S
Sbjct: 180 ITIQGNGTIEGR----GSVWWSQPEPNDEPISEELGKKMPSIKPTALRFYG---SYNVTV 232
Query: 202 KGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQL 261
GI V +TV++ T GVR+KTW G + F +I ++ V+ PIVIDQ
Sbjct: 233 TGITKACVSNITVQDVNMYGTMTGVRIKTWQGGS-GSVQSIRFSNIRVSEVQTPIVIDQF 291
Query: 262 YCPYNKCN 269
YC + C
Sbjct: 292 YCDRSSCK 299
>gi|147795881|emb|CAN65318.1| hypothetical protein VITISV_006411 [Vitis vinifera]
Length = 1052
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 121/269 (44%), Gaps = 50/269 (18%)
Query: 26 VLNVKDFGAVADGITDDSKAFDT--SWREAWNWD-----------GIKGTVLVPPGKYLV 72
++NV FGA DG+ DD++ T + E NWD +KG + G
Sbjct: 702 LVNVDAFGAAGDGVADDTQIDGTIVAPDEPKNWDPKNPRNWLDFSKLKGVLFQGGGIIDG 761
Query: 73 SFAEF-EGPCKASISFQLQGLLDLFSIDTSLSL-AKG-TFHGQGETAWPLN--QCHKNSD 127
S +++ CK + S + +ID+S S+ KG T + + ++ Q + D
Sbjct: 762 SGSKWWASSCKRNKS-------NALTIDSSSSVWVKGLTIQNSQQMHFTISRSQSVRIID 814
Query: 128 CQLPTPIRFNFLNDSTIT-GIKSVDSRYFHINILGCYNLKLNDLKITAHAD------SSK 180
Q+ P DS T GI DS N+ L + KI D S
Sbjct: 815 VQVSAP------EDSPNTDGIHITDST----------NVLLQNCKIGTGDDCISIVSGSS 858
Query: 181 DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIAS 240
+I + ++CGPG GIS+GSLGK V + + + T+NG+R+KTW G
Sbjct: 859 NIKMKTIYCGPGHGISIGSLGKDNSSGIVTKVVLDSAFLRGTTNGLRIKTWQGGS-GFVR 917
Query: 241 NFTFEDIVMNNVENPIVIDQLYCPY-NKC 268
++++ M +V NPI+IDQ YC N+C
Sbjct: 918 AVRYQNVRMEDVANPILIDQFYCDSPNEC 946
>gi|344995681|ref|YP_004798024.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963900|gb|AEM73047.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 443
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 122/304 (40%), Gaps = 79/304 (25%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKY---------------- 70
+NV++FGA +GI D++AF + E G GT+ VP G Y
Sbjct: 3 VNVREFGAKGNGIDKDTEAFKKAIEECEKQGG--GTIFVPAGIYHIGAIHLKSNMTLYIE 60
Query: 71 ---LVSFAEFEGPCKASISFQLQGLLDLFSIDTSLSLAK---GTFHGQGETAWPLNQCHK 124
++ F++ E ++Q L + + ++A GT GQGE W L H+
Sbjct: 61 SGAVLKFSQDEEEYTRWEGEEMQVYSPLIYAENAENVAVVGFGTIDGQGEKWWRL---HR 117
Query: 125 NSDCQLPTP--IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSS--- 179
N + + P P I F N+ TI GIK ++S + +N + C N+ ++++KI DS
Sbjct: 118 NKELKYPRPRSICFYKCNNVTIEGIKIINSPSWTVNPIECQNVTVHNVKIQNPYDSPNTD 177
Query: 180 -------KDILVSEVFCGPGQ---------------------------------GISVGS 199
K + +S + G G+ +GS
Sbjct: 178 GINPESCKGVRISNCYIDVGDDCVTLKSGTEDCKQKIPCENITITNCIMAHGHGGVVIGS 237
Query: 200 -LGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVI 258
+ G+++ + + NC F T G+R+KT G+ + +IVM NV P
Sbjct: 238 EMSGGVRN-----VVISNCIFEGTDRGIRIKT-RRGRGGVVEDIRVSNIVMKNVMCPFAF 291
Query: 259 DQLY 262
Y
Sbjct: 292 YMYY 295
>gi|413946316|gb|AFW78965.1| hypothetical protein ZEAMMB73_616173 [Zea mays]
Length = 486
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 119/306 (38%), Gaps = 78/306 (25%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPP--GKYLVSFAEFEGPCKA 83
+L + DFGAV DG+ DD+KA +W A +L P G + + GPC++
Sbjct: 29 LLTLHDFGAVGDGVADDTKALAGAWTAACA--AADDVILNVPAGGTFRIWPLTLAGPCRS 86
Query: 84 SISFQLQGLLDLFSIDTSLSLAKGT------FH--------------GQGETAWPLNQCH 123
I + G D+ + ++ +G FH G+G+ W +
Sbjct: 87 EIKLLISG--DIVAPESPQDWGQGQSDQWLHFHKVRDLTVTGGGIIDGRGQQWWAQSLAR 144
Query: 124 KNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA--HADSSK- 180
P + F ++ GI +S+ +H+ +++ N L++T+ H+ +K
Sbjct: 145 AQP---APKAVHFEDCQGISVKGITLQNSQSYHLTFTRSSDVEANYLRVTSPEHSVDTKG 201
Query: 181 ---------------------------------------------DILVSEVFCGPGQGI 195
D+ + + CGPG GI
Sbjct: 202 IHLVDSYNVHVMDNLISTGSADEFGFQKTISQQCDDCVSIVGNCTDVRLRAISCGPGHGI 261
Query: 196 SVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPD-SHIGIASNFTFEDIVMNNVEN 254
S+G+LG + V + V + NGVRV+T + G A FE IVM NV N
Sbjct: 262 SIGTLGVNSSVDYVEKIKVDTLFISNAENGVRVRTTENGGGGGFARKVKFESIVMRNVTN 321
Query: 255 PIVIDQ 260
PI++DQ
Sbjct: 322 PIIVDQ 327
>gi|147845173|emb|CAN79473.1| hypothetical protein VITISV_023355 [Vitis vinifera]
Length = 1033
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 75/150 (50%), Gaps = 29/150 (19%)
Query: 176 ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNG--VRVKTWPD 233
D S+ I + V G G GI VGSLGK +E VVG++V+NC FT T NG R+K
Sbjct: 909 GDGSEQINIQRVTYGLGHGICVGSLGKYPNEEPVVGISVKNCIFTNTQNGSPSRIK---- 964
Query: 234 SHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMP--NIEIGNRNLVYNGV 291
SN +F +I + V +L C +P ++++G+ NL Y+G
Sbjct: 965 -----LSNVSFRNI--RGTTSTQVAVKLVC---------SQGVPCQDVKLGDINLKYSG- 1007
Query: 292 NVKVEGPETTSLCSNVKPTLFGKQIPATCV 321
EGP S C N+KP L G Q+P TC
Sbjct: 1008 ---NEGP-AMSQCKNIKPNLLGNQLPRTCA 1033
>gi|27923254|gb|AAO27531.1| polygalacturonase [Musa acuminata]
Length = 177
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 189 CGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIV 248
CGPG G +GSLGK +V + V N + T NGVR+KTW G A F I
Sbjct: 1 CGPGHGXXIGSLGKSNSYSQVHDVKVENSLISNTENGVRIKTWQGGS-GYARKIVFRGIR 59
Query: 249 MNNVENPIVIDQLYC 263
M+NV NPI+IDQ YC
Sbjct: 60 MSNVSNPIIIDQYYC 74
>gi|384485854|gb|EIE78034.1| hypothetical protein RO3G_02738 [Rhizopus delemar RA 99-880]
Length = 383
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 88/210 (41%), Gaps = 48/210 (22%)
Query: 107 GTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLK 166
GT +G G+ AW + D PT +R + L DS + ++S H+ + NL
Sbjct: 115 GTINGNGQ-AW-----YDAEDHTAPTVLRLS-LTDSNVGYFTIINSPRAHLGVTNSNNLV 167
Query: 167 LNDLKITAHADSSKD-------------------------------------ILVSEVFC 189
L ++ + + S + I +S + C
Sbjct: 168 LTNITLNTASTSDNEAKNTDALDVSSSSGVIFKDSTLTIGDDCTAINGGVTNITLSNIIC 227
Query: 190 GPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVM 249
G G SVGSLGKG K E V + V + NGVR+KTWP G S+ + ++ +
Sbjct: 228 NGGHGFSVGSLGKGGKTETVKTVRVLDSVCNNCQNGVRIKTWPGGE-GSVSDVKYSNVKL 286
Query: 250 NNVENPIVIDQLYCPYNK---CNIKPKDSM 276
NNV+NP+++ YC N+ CN S+
Sbjct: 287 NNVDNPVIVTTHYCDKNQQSYCNGNDDSSL 316
>gi|22424|emb|CAA40803.1| polygalacturonase [Zea mays]
Length = 180
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 184 VSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPD-SHIGIASNF 242
++ V CGPG GIS+GSLG+ +++V + V++CT T GVR+K + D + + S
Sbjct: 17 ITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASVLTVSKI 76
Query: 243 TFEDIVMNNVENPIVIDQLYCPYNKC 268
+E+I M + NPI ID YCP C
Sbjct: 77 HYENIKMEDSANPIFIDMKYCPNKLC 102
>gi|384491647|gb|EIE82843.1| hypothetical protein RO3G_07548 [Rhizopus delemar RA 99-880]
Length = 381
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 181 DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIAS 240
+I + + C G G SVGSLGKG K E V + V N NGVR+KTWP G S
Sbjct: 219 NITLKHITCNGGHGFSVGSLGKGGKTEYVKTVRVLNSVCNNCQNGVRIKTWPGGK-GSVS 277
Query: 241 NFTFEDIVMNNVENPIVIDQLYCPYNKCN--IKPKDSMPNIE 280
+ ++ + +NNVE+PI+I YC N+ + K KDS +I
Sbjct: 278 DVVYKRVELNNVEHPIIITTHYCDKNQMSYCTKNKDSSLSIS 319
>gi|449531406|ref|XP_004172677.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like, partial
[Cucumis sativus]
Length = 162
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%)
Query: 196 SVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENP 255
SVGSLG+ K+ V +TV++C + T NGVR+K+W G + F+ I M NV+ P
Sbjct: 2 SVGSLGRKEKENGVQNVTVQSCRLSNTQNGVRIKSWGRPSTGFGRDIRFQHITMTNVKYP 61
Query: 256 IVIDQLYCPYNK 267
I+IDQ YCP+++
Sbjct: 62 IIIDQNYCPHHQ 73
>gi|449464894|ref|XP_004150164.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Cucumis
sativus]
Length = 908
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 83/166 (50%), Gaps = 24/166 (14%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKAS-IS 86
NV FGA DG TD +++F +W A + + T+ VP G++L++ F GPCK S I+
Sbjct: 27 NVITFGAKPDGKTDSTQSFLKAWMSACS-SLTRSTINVPKGRFLLTSITFRGPCKNSNIT 85
Query: 87 FQLQGLL---------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLP 131
FQL G L LF+ +S G G+G W C K S + P
Sbjct: 86 FQLNGTLVAPLDYNALGDSRYWILFTKVNGISFIGGNIDGKGTDYW---AC-KGSGKKCP 141
Query: 132 TPIR---FNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA 174
R FN ++ I+G++S+++R HI I C N+ + ++KI A
Sbjct: 142 PGARSITFNSASNVIISGLRSINTRQTHIVINSCNNVMVKNVKIMA 187
>gi|9857258|dbj|BAB11921.1| polygalacturonase [Diospyros kaki]
Length = 64
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 44/56 (78%)
Query: 176 ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTW 231
D S+++ V ++ CGPG GIS+GSLG+ K++ V+G+T++NCT T T NGVR+KTW
Sbjct: 9 GDGSQNVKVEKLTCGPGHGISIGSLGRYQKEDPVIGITIKNCTLTGTDNGVRIKTW 64
>gi|86276860|gb|ABC87914.1| polygalacturonase precursor [Glycine max]
Length = 217
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Query: 146 GIKSVDSRYFHINILGCYNLKL-NDLKITAHADSSKDILVSEVFCGPGQGISVGSLGKGI 204
GI +S+Y +G YN + N + S ++ ++ + CGP GIS+GSLG
Sbjct: 4 GIHVENSKY-----VGIYNSMISNGDDCISIGPGSSNVDIAGLTCGPSHGISIGSLGVHN 58
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
V LTVR+ + NG+R+KTW +G S+ FE+I M NV N I+IDQ YC
Sbjct: 59 SQACVSNLTVRDSIIRESDNGLRIKTW-QGGMGSVSSLGFENIQMENVGNCIIIDQYYCM 117
Query: 265 YNKC 268
+C
Sbjct: 118 SKEC 121
>gi|449511599|ref|XP_004164001.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 321
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 19/177 (10%)
Query: 19 GIDATNRVLNVKDFGAVADGIT-DDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEF 77
G A + NV D+GA D D +KAF ++W A + T+ VP K+ +S A F
Sbjct: 42 GSIAASLTFNVVDYGAKPDNTKFDSAKAFQSAWTHACS-SSKAATIYVPKAKFYISSATF 100
Query: 78 EGPCKA-SISFQLQGLL---------------DLFSIDTSLSLAKGTFHGQGETAWPLNQ 121
GPCK +I+ ++ G L LF ++++ G GQG W Q
Sbjct: 101 NGPCKNNAITLKMDGTLVAPSNFQLTAQSKNWILFRQVNGVTVSGGVIDGQGSGLWACKQ 160
Query: 122 CHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS 178
K + T + F + I+G+ S++S+ +HI + C N+K+ L I A A+S
Sbjct: 161 SGKTCP-RGTTSLEFTNSQNILISGLTSLNSQIYHIVMNKCRNVKMESLNIYAPANS 216
>gi|56550183|emb|CAE51357.1| putative polygalacturonase [Musa acuminata]
Length = 178
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 189 CGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIV 248
CGPG GI +GSLGK V +TV+N + NGVR+KTW G S+ +FE+I
Sbjct: 1 CGPGHGIRIGSLGKQNTRACVANITVKNAVIKHSDNGVRIKTW-QGGSGSVSSISFENIR 59
Query: 249 MNNVENPIVIDQLYCPYNKC 268
M+ V NPI+IDQ YC C
Sbjct: 60 MDTVRNPIIIDQYYCLSKSC 79
>gi|312794141|ref|YP_004027064.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181281|gb|ADQ41451.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 447
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 122/309 (39%), Gaps = 83/309 (26%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEG------ 79
++NV++FGA +GI D++AF + E G GT+ VP G Y + +
Sbjct: 2 IVNVREFGAKGNGIDKDTEAFKKAIEECEKQGG--GTIFVPAGIYHIGAIHLKSNMTLYI 59
Query: 80 PCKASISF-----------------QLQGLLDLFSIDTSLSLAK---GTFHGQGETAWPL 119
A + F ++Q L + + ++A GT GQGE W L
Sbjct: 60 ESGAVLKFSQDEEDYPLVYTRWEGEEMQVYSPLIYAENAENVAVVGFGTIDGQGEKWWRL 119
Query: 120 NQCHKNSDCQLPTP--IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD 177
H+N + + P P I F N+ TI GIK ++S + +N + C N+ ++++KI D
Sbjct: 120 ---HRNKELKYPRPRSICFYKCNNVTIEGIKIINSPSWTVNPIECQNVTVHNVKIQNPYD 176
Query: 178 SS----------KDILVSEVFCGPGQ---------------------------------G 194
S K + +S + G G
Sbjct: 177 SPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTEDCKQKIPCENITITNCIMAHGHGG 236
Query: 195 ISVGS-LGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVE 253
+ +GS + G+++ + + NC F T G+R+KT G+ + +IVM NV
Sbjct: 237 VVIGSEMSGGVRN-----VVISNCIFEGTDRGIRIKTR-RGRGGVVEDIRVSNIVMKNVM 290
Query: 254 NPIVIDQLY 262
P Y
Sbjct: 291 CPFAFYMYY 299
>gi|384499813|gb|EIE90304.1| hypothetical protein RO3G_15015 [Rhizopus delemar RA 99-880]
Length = 382
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 59/103 (57%), Gaps = 5/103 (4%)
Query: 181 DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIAS 240
+I +S + C G G SVGSLGK K E V + V + T NGVR+KTWP G +
Sbjct: 219 NITLSNIVCNGGHGFSVGSLGKNGKSETVKTVRVLDSTCNNCQNGVRIKTWPGGE-GSVT 277
Query: 241 NFTFEDIVMNNVENPIVIDQLYCPYNK---CNIKPKDSMPNIE 280
+ +++IV+ NV+NP+++ YC N+ CN K DS +I
Sbjct: 278 DVKYQNIVLKNVDNPLLVTTHYCDSNQMTYCN-KNDDSSLSIS 319
>gi|312126393|ref|YP_003991267.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
gi|311776412|gb|ADQ05898.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
Length = 447
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 121/308 (39%), Gaps = 83/308 (26%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEG------P 80
+NV++FGA +GI D++AF + E G GT+ VP G Y + +
Sbjct: 3 VNVREFGAKGNGIDKDTEAFKKAIEECEKQGG--GTIFVPAGIYHIGAIHLKSNMTLYIE 60
Query: 81 CKASISF-----------------QLQGLLDLFSIDTSLSLAK---GTFHGQGETAWPLN 120
A + F ++Q L + + ++A GT GQGE W L
Sbjct: 61 SGAVLKFSQDEEDYPLVYTRWEGEEMQVYSPLIYAENAENVAVVGFGTIDGQGEKWWRL- 119
Query: 121 QCHKNSDCQLPTP--IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS 178
H+N + + P P I F N+ TI GIK V+S + +N + C N+ ++++KI DS
Sbjct: 120 --HRNKELKYPRPRSICFYRCNNVTIEGIKIVNSPSWTVNPIECQNVTVHNVKIQNPYDS 177
Query: 179 S----------KDILVSEVFCGPGQ---------------------------------GI 195
K + +S + G G+
Sbjct: 178 PNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTEDCKQKIPCENITITNCIMAHGHGGV 237
Query: 196 SVGS-LGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVEN 254
+GS + G+++ + + NC F T G+R+KT G+ + +IVM NV
Sbjct: 238 VIGSEMSGGVRN-----VVISNCIFEGTDRGIRIKT-RRGRGGVVEDIRVSNIVMKNVMC 291
Query: 255 PIVIDQLY 262
P Y
Sbjct: 292 PFAFYMYY 299
>gi|157420121|gb|ABV55549.1| polygalacturonase [Manilkara zapota]
Length = 211
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 34/209 (16%)
Query: 32 FGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQG 91
FGA DG +DD++AF +W++A + G +LVP YLV F GPCK+ ++ Q+ G
Sbjct: 1 FGARGDGRSDDTEAFKNAWKKACSSTG--AVLLVPQKNYLVKPIRFSGPCKSDLTVQVYG 58
Query: 92 LLD-----------------LFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSD--CQ-LP 131
+D ++ + GT +G G W N C N C+ P
Sbjct: 59 TIDASDNRADYNEDQRHWLVFDGVENLMVEGGGTINGNGVIWWK-NSCKINKALPCKDAP 117
Query: 132 TPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADSSKD 181
T + F + + +K +++ H++ C N++ ++L +TA H +++
Sbjct: 118 TALTFYNCENLVVRNLKIQNAQQIHVSFEECVNVQASNLVVTAPKKSPNTDGIHVARTRN 177
Query: 182 ILVSEVFCGPGQG-ISVGSLGKGIKDEEV 209
I +S G G IS+ S + ++ ++
Sbjct: 178 IQISSSVIGTGDDCISIASGSQKVQATDI 206
>gi|384487846|gb|EIE80026.1| polygalacturonase [Rhizopus delemar RA 99-880]
Length = 383
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 90/210 (42%), Gaps = 48/210 (22%)
Query: 107 GTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLK 166
GT +G G+ AW Q H PT RF+ N S ++GI +++ H+ + NL
Sbjct: 115 GTVNGNGQ-AWYDAQDHT-----APTVFRFSLTN-SKVSGINIINAPRAHLGVTNSQNLV 167
Query: 167 LNDLKITAHADSSK-------------------------------------DILVSEVFC 189
L+++ + + S +I +S V C
Sbjct: 168 LDNITLKTVSTSKNLAKNTDALDVSSSQGIIFQNSHLTVGDDCLAINGGVTNITLSNVNC 227
Query: 190 GPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVM 249
G G SVGSLGKG E V + + + + T NGVR+KTWP G S+ + + +
Sbjct: 228 VGGHGFSVGSLGKGGATENVNMVRILSSSCTNCQNGVRIKTWPGGK-GKVSDVKYIGLSL 286
Query: 250 NNVENPIVIDQLYCPYNK---CNIKPKDSM 276
NV+NPIVI YC N+ CN S+
Sbjct: 287 VNVDNPIVITTHYCDQNQESYCNGNDASSL 316
>gi|312136085|ref|YP_004003423.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
gi|311776136|gb|ADQ05623.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
Length = 447
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 122/309 (39%), Gaps = 83/309 (26%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKY----------LVSFA 75
++NV++FGA +GI D++AF + E G GT+ VP G Y + +
Sbjct: 2 IVNVREFGAKGNGIDKDTEAFKKAIEECEKQGG--GTIFVPAGIYHTGPIHLKSNMTLYI 59
Query: 76 EFEGPCKASISFQ-------------LQGLLDLFSIDTSLSLAK---GTFHGQGETAWPL 119
E K S + +Q L + + ++A GT GQGE W L
Sbjct: 60 ENGAVLKFSQDIEDYPLVYTRWEGEEMQVYSPLIYAENAENVAVVGFGTIDGQGEKWWRL 119
Query: 120 NQCHKNSDCQLPTP--IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD 177
H+N + + P P I F N+ TI GIK V+S + +N + C N+ ++++KI D
Sbjct: 120 ---HRNKELKYPRPRSICFYRCNNVTIEGIKIVNSPSWTVNPIECQNVTVHNVKIQNPYD 176
Query: 178 SS----------KDILVSEVFCGPGQ---------------------------------G 194
S K + +S + G G
Sbjct: 177 SPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTEDCKQKIPCENITITNCIMAHGHGG 236
Query: 195 ISVGS-LGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVE 253
+ +GS + G+++ + + NC F T G+R+KT G+ + +IVM NV
Sbjct: 237 VVIGSEMSGGVRN-----VVISNCIFEGTDRGIRIKTR-RGRGGVVEDIRVSNIVMKNVM 290
Query: 254 NPIVIDQLY 262
P Y
Sbjct: 291 CPFAFYMYY 299
>gi|4049340|emb|CAA22565.1| putative protein [Arabidopsis thaliana]
gi|7270142|emb|CAB79955.1| putative protein [Arabidopsis thaliana]
Length = 312
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 196 SVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENP 255
S+GSLG+G E V + VR+CTFT T NG R+KTWP G N +EDI + N P
Sbjct: 103 SIGSLGEGGASEVVQNVNVRHCTFTGTQNGARIKTWPGGQ-GFVKNILYEDITLINANFP 161
Query: 256 IVIDQLY 262
I+IDQ Y
Sbjct: 162 IIIDQQY 168
>gi|449443297|ref|XP_004139416.1| PREDICTED: probable polygalacturonase At1g80170-like [Cucumis
sativus]
gi|449493697|ref|XP_004159417.1| PREDICTED: probable polygalacturonase At1g80170-like [Cucumis
sativus]
Length = 290
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 43/227 (18%)
Query: 59 IKGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLLDLFSIDTSLSLAKGTFHGQGETAWP 118
I G ++ P S E+ G K S+ L+G+ L I+ S G G+G T W
Sbjct: 20 INGVIVAP-----TSPKEWAGTDK-SLWLALEGISRL-RINGS---GIGKIDGRG-TGWW 68
Query: 119 LNQCHKNSDCQ-----LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKIT 173
C + + + PT ++ ND ++ + ++S + ++GC ++ +L IT
Sbjct: 69 NQSCRDHPNLEGCTSIAPTAMKIISCNDPNLSNLHFINSSQALVLLMGCIRTEIKNLVIT 128
Query: 174 A----------HADSSKDILV----------------SEVFCGPGQGISVGSLGKGIKDE 207
A H SS +I++ S + CGPG GIS+GSLG+G
Sbjct: 129 APERSPNTDGIHIHSSHNIIIRNTTIGTGDYTSRMNISHIKCGPGHGISIGSLGRGGNFV 188
Query: 208 EVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVEN 254
+V ++V N F T+NG R+KTW S + IA N + +++ ++ N
Sbjct: 189 QVEDISVSNIYFKGTTNGARIKTWQQSGVHIA-NVSIKNLFGTSMSN 234
>gi|224128528|ref|XP_002329026.1| predicted protein [Populus trichocarpa]
gi|222839697|gb|EEE78020.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 129/322 (40%), Gaps = 67/322 (20%)
Query: 61 GTVLVPP-GKYLVSFAEFEGPCKAS-ISFQ----LQGLLDLFSIDTSLSLAKGTFHGQGE 114
G+VL P ++ F GPCKA+ IS L L I G G+G+
Sbjct: 7 GSVLTTPWNDIFLNPLTFNGPCKANKISVMKERDLSTWLRFKDIAWLTVSGSGLMDGRGK 66
Query: 115 TAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA 174
W + +++ +RF + I V+S HI +LG N +L L I +
Sbjct: 67 GWWDASCRYRHGKA-----VRFEGCEHLLVDHINIVNSPQIHITLLGSRNAELRFLDIQS 121
Query: 175 ----------HADSSKDILVSE-----------------------VFCGPGQGISVGSLG 201
H SS D+ + + V CGPG GIS+GS G
Sbjct: 122 PESSPNTDGIHISSSNDVTIHDSIIGSGDDCISIGDYTSNITILDVSCGPGHGISIGSFG 181
Query: 202 KGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQL 261
G + EV G+ V F+ T+NG R+KTW + G + F D++ VENPI+ID+
Sbjct: 182 GGGNEVEVEGIFVSRANFSGTTNGARIKTWQGAR-GNVRDVHFSDLIFTAVENPIIIDEH 240
Query: 262 Y---------------CPYNKCNIKPKDSMP-----NIEIGNRNLVYNGVNVK--VEGPE 299
Y Y++ K ++ + + N+ + + +K + G +
Sbjct: 241 YGDPQEKNQTGVHISDVSYSRAQGTAKTAVAINFNCSSSVACTNITLDNIQLKSSIRGQQ 300
Query: 300 TTSLCSNVKPTLFGKQIPATCV 321
+S C+N G P +C+
Sbjct: 301 LSSFCNNAHGITKGIVYPKSCL 322
>gi|55166715|dbj|BAD67423.1| polygalacturonase [Rhizopus oryzae]
gi|169138889|gb|ACA48699.1| polygalacturonase [Rhizopus oryzae]
Length = 383
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 90/210 (42%), Gaps = 48/210 (22%)
Query: 107 GTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLK 166
GT +G G+ AW Q H PT RF+ N S ++GI +++ H+ + NL
Sbjct: 115 GTVNGNGQ-AWYDAQDHT-----APTVFRFSLTN-SKVSGINIINAPRAHLGVTNSQNLV 167
Query: 167 LNDLKITAHADSSK-------------------------------------DILVSEVFC 189
L+++ + + S +I ++ V C
Sbjct: 168 LDNITLKTVSTSKNLAKNTDALDVSSSQGIIFQNSHLTVGDDCLAVNAGVTNITLNNVNC 227
Query: 190 GPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVM 249
G G SVGSLGKG E V + + N + T NGVR+KTWP G S+ + + +
Sbjct: 228 VGGHGFSVGSLGKGGATENVNLVRILNSSCTNCQNGVRIKTWPGGK-GKVSDVKYIGLSL 286
Query: 250 NNVENPIVIDQLYCPYNK---CNIKPKDSM 276
NV+NPI+I YC N+ CN S+
Sbjct: 287 VNVDNPIIITTHYCDQNQESYCNGNDASSL 316
>gi|57899399|dbj|BAD88046.1| putative polygalacturonase PG1 [Oryza sativa Japonica Group]
gi|57900558|dbj|BAD88298.1| putative polygalacturonase PG1 [Oryza sativa Japonica Group]
Length = 372
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 117/301 (38%), Gaps = 75/301 (24%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK 60
+L+A LV+ + A +V FGA +GI DDS+ I
Sbjct: 1 MLIAGAILCLVASTAPAPALSAGRTTFSVSSFGAAGNGIADDSE--------------ID 46
Query: 61 GTVLVPPGKYLVSFAEFEGPCKASISFQLQGLLDLFSIDTSLSLAKGTFHGQGETAWPLN 120
G VL PPG + + + P + ++F+ LD F+I GT GQ L
Sbjct: 47 GDVLAPPG--MGYWPKARRPLQW-LNFK---WLDGFTIQ-----GTGTVDGQSTL---LR 92
Query: 121 QCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-- 178
+ QL IRF + ++ I+ +S H+ +K+ ++ I++ DS
Sbjct: 93 SVSPANVSQL---IRFYSSFNVSVRNIRITNSPQCHLKFDSSGGIKVKNITISSPGDSLN 149
Query: 179 ----------SKDILVSEVFCG---------------------PGQGISVGSLGKG---- 203
DI S + CG PG GIS+G LGK
Sbjct: 150 TDGIHLQNTRDVDIRSSSIGCGDDCISIQTGCSNVHMKNINCNPGHGISLGGLGKDNSLA 209
Query: 204 -IKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLY 262
+ D + V N + GVR+KTW G N TF ++ + NV PI IDQ Y
Sbjct: 210 CVSDVFAEHINVENALY-----GVRIKTWQGGK-GTVRNVTFSNVRVANVATPIAIDQFY 263
Query: 263 C 263
C
Sbjct: 264 C 264
>gi|284005877|ref|YP_003391696.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
gi|283821061|gb|ADB42897.1| glycoside hydrolase family 28 [Spirosoma linguale DSM 74]
Length = 390
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 119/285 (41%), Gaps = 65/285 (22%)
Query: 35 VADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVS---------------FAEFEG 79
+ADG TD +K+ + G GT++VP G+YL+S
Sbjct: 23 LADGTTDQAKSLQQTIDSCGATGG--GTLIVPAGRYLISPISLCSRVNLQLASGATLLAS 80
Query: 80 PCKASISFQLQGLLDLFSI-DTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNF 138
A + +L L++ S+ D SL+ GT G G W Q +S L P R +
Sbjct: 81 TNAADYTPKLPNLINGDSLTDVSLT-GTGTIDGNGAVWW---QRFIDSGKTLNRP-RLIY 135
Query: 139 LNDS---TITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSSK----------DILVS 185
L S TI G+ ++S FH+ C N+ + +L ITA +DS +L+
Sbjct: 136 LTRSRNVTIDGLTLINSPSFHLVPSQCQNVTIQNLTITAPSDSPNTDGIDPANCTHVLIQ 195
Query: 186 EVFCGPGQ-------GISVGSLGKGIKDEEVV--------GLTV-------------RNC 217
G G S G + + +D ++ GL+V NC
Sbjct: 196 NCTIDNGDDNIAIKGGRSNGQIVQPCQDIQIRNCRFLHGHGLSVGSETSSGVSSVSVTNC 255
Query: 218 TFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLY 262
TFT T+NG+R+K+ P G N ++ I M NV NP++ID Y
Sbjct: 256 TFTGTTNGIRIKSQPGLG-GAIQNLSYSQITMTNVTNPLIIDLAY 299
>gi|124361046|gb|ABN09018.1| Pectolytic enzyme, Pectin lyase fold [Medicago truncatula]
Length = 267
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 72/172 (41%), Gaps = 55/172 (31%)
Query: 120 NQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----- 174
N CH PT + F+ + + V+S+ HI C + ++ L ++A
Sbjct: 16 NPCHP-----APTSLTFHRCKSLKVRNLTVVNSQKMHIAFTRCMRVVVSRLNVSAPSSSP 70
Query: 175 ----------------HAD-------SSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVG 211
H+D +S + + CGPG GIS+GSLGK E++
Sbjct: 71 NTDGIHISATKGIEISHSDDCISIVRNSSQVWIRNFSCGPGHGISIGSLGKSKAWEKI-- 128
Query: 212 LTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
NG G+ASN TF+DIVM NV NPI+IDQ YC
Sbjct: 129 -----------ENGGH---------GLASNITFQDIVMENVSNPIIIDQYYC 160
>gi|18644692|gb|AAL76332.1| polygalacturonase [Musa acuminata]
Length = 99
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 180 KDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIA 239
D+ + V CGPG GIS+GSLG + V ++V+N + NGVR+KTW +G
Sbjct: 18 SDVDIQNVTCGPGHGISIGSLGMHNSEACVSNVSVKNAVIRNSDNGVRIKTWQGG-MGSV 76
Query: 240 SNFTFEDIVMNNVENPIVIDQLY 262
S+ +F+ + M NV NPI+ID Y
Sbjct: 77 SDISFDTVYMENVRNPILIDLEY 99
>gi|296084983|emb|CBI28398.3| unnamed protein product [Vitis vinifera]
Length = 105
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 53/107 (49%), Gaps = 35/107 (32%)
Query: 244 FEDIVMNNVENPIVIDQLYCPYNKCNIK-PKDSM-------------------------- 276
FEDIVMNNV NPI+IDQ YCP+N+CN+K P M
Sbjct: 3 FEDIVMNNVGNPIIIDQEYCPHNQCNLKIPSRIMLSNVSFRNIRGTTSTQVAVKLVCSQG 62
Query: 277 ---PNIEIGNRNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 320
+ E+G+ NL YNG KV S C N+KP L G Q+P TC
Sbjct: 63 VPCEDAELGDINLKYNG---KVG--HAMSQCKNIKPNLLGTQLPRTC 104
>gi|359487382|ref|XP_003633582.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Vitis
vinifera]
Length = 418
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 114/260 (43%), Gaps = 58/260 (22%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYL-VSFAEFEGPCKA-S 84
+NV++FGA DG TDD++AF +W E + + ++VP K V F GPCK+ S
Sbjct: 93 VNVENFGAEGDGETDDTEAFKKAWDETCSSN--TAVLVVPENKKCHVKPITFSGPCKSDS 150
Query: 85 ISFQLQGLLD-----------------LFSIDTSLSLAKGTFHGQGETAWPLNQCHKN-- 125
++ ++ G + ++I +GT G G+ W N C N
Sbjct: 151 VTLKILGTIKASDDPSHYKNDRSHWLVFYNIKNFQVEGQGTIDGNGKIGWK-NLCKINII 209
Query: 126 SDCQL-PTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------ 178
C + PT I F ND + G+ +++ H++ N++ ++++T+ S
Sbjct: 210 QPCIVAPTLISFIQCNDLKVYGLNVQNAQEMHVSFEQSVNVQAFNIRVTSPGTSPNTDGI 269
Query: 179 ---------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVG 211
SK+I +V CGPG GIS+GSLG G + V
Sbjct: 270 HVTRSENVQIIKPVIQAGDDCISIVNGSKNIEAIDVTCGPGHGISIGSLGGGKSEAXVSN 329
Query: 212 LTVRNCTFTCTSNGVRVKTW 231
+ V T+NGVR+KTW
Sbjct: 330 VLVNKAKLIGTTNGVRIKTW 349
>gi|414877336|tpg|DAA54467.1| TPA: hypothetical protein ZEAMMB73_770856 [Zea mays]
Length = 367
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 96/267 (35%), Gaps = 77/267 (28%)
Query: 78 EGPCKASISFQLQGLLDLFSIDTSLSLAKGTFHGQGETAWPL--------NQCHKNSDCQ 129
+GP + + + + D +GT G GE W L N C
Sbjct: 4 DGPASWPATDSRKQWIVFYKADRLTLAGEGTIEGNGEEWWDLPCKPHRGPNGSTLRGPCD 63
Query: 130 LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HADSS 179
P IRF ND T+ G++ +S FH+ C ++++ L +++ H +++
Sbjct: 64 SPALIRFFSSNDVTVCGLRIENSPQFHLRFDDCERVRVDGLFVSSPASSPNTDGVHVENT 123
Query: 180 K-----------------------DILVSEVFCGPGQGI--------------------- 195
K D+ V + CG G GI
Sbjct: 124 KSVQILNSRIYNGDDCVSIGAGCSDVHVENITCGHGHGIRYLSVCHSLTHQRASMARGTV 183
Query: 196 --------------SVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASN 241
S+GSLG V +TVRN + NGVR+KTW G S
Sbjct: 184 CSEPDAASCCCHPRSIGSLGVHNTHACVSNVTVRNVRILDSDNGVRIKTW-QGGAGAVSA 242
Query: 242 FTFEDIVMNNVENPIVIDQLYCPYNKC 268
F + M NV+N IVIDQ YC + C
Sbjct: 243 VEFTGVQMQNVKNCIVIDQYYCLGHGC 269
>gi|38699536|gb|AAR27070.1| polygalacturonase 2 [Ficus carica]
Length = 117
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 177 DSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHI 236
+ SK++ ++ CGPG GIS+GSLG + V G+TV+ T T+NGVR+KTW
Sbjct: 33 NGSKNVEAMDITCGPGHGISIGSLGAKKSEAYVSGVTVKRAKLTGTTNGVRIKTWQGGS- 91
Query: 237 GIASNFTFEDIVMNNVENP 255
G AS+ F DI M +V NP
Sbjct: 92 GCASDILFSDIEMVDVCNP 110
>gi|297743989|emb|CBI36959.3| unnamed protein product [Vitis vinifera]
Length = 302
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 93/237 (39%), Gaps = 66/237 (27%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKY--LVSFAEFEGPCKA 83
+ +V FGA DG++DDSKAF +W A +K + P K+ L+S +GPC+
Sbjct: 69 IFDVPSFGARGDGVSDDSKAFQVTWSAA---CAVKNATIKIPSKFRLLISPITLQGPCEP 125
Query: 84 SISFQLQGL------------------LDLFSIDTSLSLAKGTFHGQGETAWPL------ 119
+ Q+ G+ ++ ++ + +GT +GQG W +
Sbjct: 126 GLVLQIDGMIVAPGGPRMWLKPELLQWINFKNLHDFVIQGRGTINGQGSAWWWITPRILQ 185
Query: 120 ----NQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH 175
N+ + D PT +RF + TI I+ +S H+ C +K+ +L I++
Sbjct: 186 NQLTNRNSRYDDTMKPTAVRFYSSLNLTIRDIQIQNSPRCHLKFDNCAGVKVTNLSISSP 245
Query: 176 ADSS---------------------------------KDILVSEVFCGPGQGISVGS 199
DS D+ + + CGPG GI G+
Sbjct: 246 GDSPNTDGIHLQNSQRVEVENSTISCGDDCISIQTGCSDVNIQNIKCGPGHGIRHGA 302
>gi|384490094|gb|EIE81316.1| hypothetical protein RO3G_06021 [Rhizopus delemar RA 99-880]
Length = 385
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 78/198 (39%), Gaps = 45/198 (22%)
Query: 107 GTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLK 166
GT +G G+ W D P+ +R NDS+ ++S H+N+ NL
Sbjct: 117 GTINGNGQAWWDA------LDRTAPSVLRI-AANDSSFGNFNIINSPRAHLNVTNSTNLL 169
Query: 167 LNDLKITAHADSSK-------------------------------------DILVSEVFC 189
L+D I +++S + VS + C
Sbjct: 170 LHDFIIHTVSNNSNPAKNTDALDLYHSSGVIFRDSDLTIGDDCLAVKENVTKVTVSNITC 229
Query: 190 GPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVM 249
G G S+GSLG G + + V + V N T NGVRVKTW G + F DI +
Sbjct: 230 RGGHGYSIGSLGMGGRRDFVTQVNVYNSTCIDCQNGVRVKTWAGGK-GFVEDINFTDIYL 288
Query: 250 NNVENPIVIDQLYCPYNK 267
ENPI+I YC N+
Sbjct: 289 EKAENPIIITTHYCDKNE 306
>gi|332685997|ref|YP_004455771.1| polygalacturonase [Melissococcus plutonius ATCC 35311]
gi|332370006|dbj|BAK20962.1| polygalacturonase [Melissococcus plutonius ATCC 35311]
Length = 442
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 128/319 (40%), Gaps = 94/319 (29%)
Query: 23 TNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCK 82
T +++++DF +ADGI+ D+KAF+ + + A G G ++ PPG YL GP +
Sbjct: 2 TQSLISLQDFSPIADGISLDTKAFEAAIKVAERQGG--GHIVAPPGTYLT------GPIR 53
Query: 83 --ASISFQLQ-GLLDLFS--------IDTSLSLAK---------------------GTFH 110
+++ F++Q G LF+ +D+ L K GT
Sbjct: 54 LISNLVFEIQAGATLLFTDDVEQFPIVDSRLEGVKSKAYMPCIYGKNLTNVILTGSGTLD 113
Query: 111 GQGETAWPLNQCHKNSDCQLPTP----IRFNFLNDSTITGIKSVDSRYFHINILGCYNLK 166
GQG W L H+ + +L P I F++ + TI+ + S + ++ + CY++
Sbjct: 114 GQGTNWWKL---HRETPEKLAYPRPYLIGFDYSSRITISDLNLTMSPSWTVHPMECYDVT 170
Query: 167 LNDLKITAHADSS-------------------------------------------KDIL 183
+ ++ I ADS ++I
Sbjct: 171 IQNISILNPADSPNTDGIDPESCKNLRILNCNIDVGDDCIAIKSGTEQTTTSKSACENIT 230
Query: 184 VSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFT 243
+S G G V LG + + +T+ NC F T G+R+KT G+ N T
Sbjct: 231 ISNCTMVHGHGAVV--LGSEM-SRNIRNVTISNCVFQQTDRGIRMKTR-RGRGGVVENIT 286
Query: 244 FEDIVMNNVENPIVIDQLY 262
IVM +V P VI+ Y
Sbjct: 287 VSTIVMEDVLCPFVINAYY 305
>gi|238602178|ref|XP_002395611.1| hypothetical protein MPER_04312 [Moniliophthora perniciosa FA553]
gi|215466639|gb|EEB96541.1| hypothetical protein MPER_04312 [Moniliophthora perniciosa FA553]
Length = 127
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 60/101 (59%), Gaps = 4/101 (3%)
Query: 179 SKDILVSEVFCGPGQGISVGSLGKGIKDEEVV-GLTVRNCTFTCTSNGVRVKTW--PDSH 235
S +ILVS + C GISVGSLG+ + ++V +T + T SNG R+K W P+
Sbjct: 1 STNILVSNLDCTGSHGISVGSLGQYPEFFDIVENVTATDIHMTDASNGARIKAWAGPNVG 60
Query: 236 IGIASNFTFEDIVMNNVENPIVIDQLY-CPYNKCNIKPKDS 275
GI N TF++ V++NVENP+ IDQ Y + C+ P ++
Sbjct: 61 SGIVRNVTFKNFVVDNVENPLTIDQCYFTDADACSANPSNT 101
>gi|379727941|ref|YP_005320126.1| polygalacturonase [Melissococcus plutonius DAT561]
gi|376318844|dbj|BAL62631.1| polygalacturonase [Melissococcus plutonius DAT561]
Length = 442
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 127/320 (39%), Gaps = 96/320 (30%)
Query: 23 TNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCK 82
T +++++DF +ADGI+ D+KAF+ + + A G G ++VPPG YL GP +
Sbjct: 2 TQSLISLQDFSPIADGISLDTKAFEAAIKVAERQGG--GHIVVPPGTYLT------GPIR 53
Query: 83 --ASISFQLQ-GLLDLFSIDTS-----------------------------LSLAKGTFH 110
+++ F++Q G LF+ D + GT
Sbjct: 54 LISNLVFEIQAGATLLFTDDVEQFPTVDSRWEGVKSKAYMPCIYGKNLTNVILTGSGTLD 113
Query: 111 GQGETAWPLNQCHKNSDCQLPTP----IRFNFLNDSTITGIKSVDSRYFHINILGCYNLK 166
GQG W L H+ + +L P I F++ + TI+ + S + ++ + CY++
Sbjct: 114 GQGTNWWKL---HRETPEKLAYPRPYLIGFDYSSRITISDLNLTMSPSWTVHPMECYDVT 170
Query: 167 LNDLKITAHADSS-------------------------------------------KDIL 183
+ ++ I ADS ++I
Sbjct: 171 IQNISILNPADSPNTDGIDPESCKNLRILNCNIDVGDDCIAIKSGTEQTTTSKSACENIT 230
Query: 184 VSEVFCGPGQG-ISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNF 242
+S G G + +GS G + +T+ NC F T G+R+KT G+ N
Sbjct: 231 ISNCTMVHGHGAVVLGSEMSG----NIRNVTISNCVFQQTDRGIRMKTR-RGRGGVVENI 285
Query: 243 TFEDIVMNNVENPIVIDQLY 262
T IVM +V P VI+ Y
Sbjct: 286 TVSTIVMEDVLCPFVINAYY 305
>gi|344995379|ref|YP_004797722.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963598|gb|AEM72745.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 447
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 121/309 (39%), Gaps = 83/309 (26%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEG------ 79
++NV++FGA +GI ++AF + E G GT+ VP G Y + +
Sbjct: 2 IVNVREFGAKGNGIDKVTEAFKKAIEECEKQGG--GTIFVPAGIYHIGAIHLKSNMTLYI 59
Query: 80 PCKASISF-----------------QLQGLLDLFSIDTSLSLAK---GTFHGQGETAWPL 119
A + F ++Q L + + ++A GT GQGE W L
Sbjct: 60 ESGAVLKFSQDEEDYPLVYTRWEGEEMQVYSPLIYAENAENVAVVGFGTIDGQGEKWWRL 119
Query: 120 NQCHKNSDCQLPTP--IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD 177
H+N + + P P I F N+ TI GIK ++S + +N + C N+ ++++KI D
Sbjct: 120 ---HRNKELKYPRPRSICFYKCNNVTIEGIKIINSPSWTVNPIECQNVTVHNVKIQNPYD 176
Query: 178 SS----------KDILVSEVFCGPGQ---------------------------------G 194
S K + +S + G G
Sbjct: 177 SPNTDGINPESCKGVRISNCYIDVGDDCVTLKSGTEDCKQKIPCENITITNCIMAHGHGG 236
Query: 195 ISVGS-LGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVE 253
+ +GS + G+++ + + NC F T G+R+KT G+ + +IVM NV
Sbjct: 237 VVIGSEMSGGVRN-----VVISNCIFEGTDRGIRIKTR-RGRGGVVEDIRVSNIVMKNVM 290
Query: 254 NPIVIDQLY 262
P Y
Sbjct: 291 CPFAFYMYY 299
>gi|357128340|ref|XP_003565831.1| PREDICTED: polygalacturonase At1g48100-like [Brachypodium
distachyon]
Length = 268
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 181 DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIAS 240
DI + CGPG GIS+G LG+ V +TVR+ + T GVR+KTW G+
Sbjct: 74 DISIHNANCGPGHGISIGGLGRYNTKACVSNITVRDVSMFKTMTGVRIKTWQGGS-GLVQ 132
Query: 241 NFTFEDIVMNNVENPIVIDQLYC 263
F +I ++ V+ PI+IDQ YC
Sbjct: 133 GIRFANIQVSEVQTPIMIDQFYC 155
>gi|395328396|gb|EJF60789.1| hypothetical protein DICSQDRAFT_62163 [Dichomitus squalens LYAD-421
SS1]
Length = 412
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 164 NLKLNDLKITAHAD------SSKDILVSEVFCGPGQGISVGSLGKGIKDEEVV-GLTVRN 216
N+ + D IT D +S +ILVS + C GISVGSLG+ + ++V + N
Sbjct: 215 NVTIADSNITNGDDCVSFKPNSTNILVSNLSCNGSHGISVGSLGQYAGEYDIVENVLATN 274
Query: 217 CTFTCTSNGVRVKTWPDSHIG--IASNFTFEDIVMNNVENPIVIDQLY 262
+ NG R+K W +G I N TFE V +NV+NP++IDQ Y
Sbjct: 275 IRMSNAQNGARIKAWAGKDVGSGIVKNITFEGFVESNVDNPVIIDQCY 322
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.137 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,141,273,615
Number of Sequences: 23463169
Number of extensions: 219085309
Number of successful extensions: 423001
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 1291
Number of HSP's that attempted gapping in prelim test: 417165
Number of HSP's gapped (non-prelim): 3376
length of query: 321
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 179
effective length of database: 9,027,425,369
effective search space: 1615909141051
effective search space used: 1615909141051
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 77 (34.3 bits)