BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047946
(321 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6H9K0|PGLR2_PLAAC Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2
PE=1 SV=1
Length = 377
Score = 225 bits (573), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 136/381 (35%), Positives = 192/381 (50%), Gaps = 88/381 (23%)
Query: 18 RGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEF 77
RG+ ++ V NV D+GA G D S+A +W+ A G TVL+P G Y +
Sbjct: 1 RGVQSSGSVFNVNDYGA--KGAGDISQAVMKAWKAACASQG-PSTVLIPKGNYNMGEVAM 57
Query: 78 EGPCKAS-ISFQLQGLL---------------DLFSIDTSLSLAKGTFHGQGETAWPLNQ 121
+GPCK S I FQ+ G++ + ID GT GQG+TAW N
Sbjct: 58 QGPCKGSKIGFQIDGVVKAPADPSKFKSDGWVSFYRIDGLTVSGTGTLDGQGQTAWAKNN 117
Query: 122 CHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-- 178
C KN +C+ +RF+FL + + I S++S+ FHIN+L C ++ + +TA S
Sbjct: 118 CDKNPNCKHAAMNLRFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSIN 177
Query: 179 -------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDE 207
S+++ +++V CGPG GIS+GSLG+ ++
Sbjct: 178 TDGIHVGISKGVTITNTKIATGDDCISIGPGSQNVTITQVNCGPGHGISIGSLGRYNNEK 237
Query: 208 EVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
EV G+TV+ CTF+ T NGVRVKTWP+S G A++ TF+D+ MNNV+NP+++DQ YCPY +
Sbjct: 238 EVRGITVKGCTFSGTMNGVRVKTWPNSPPGAATDLTFQDLTMNNVQNPVILDQEYCPYGQ 297
Query: 268 CN----------------------------IKPKDSMP--NIEIGNRNLVYNGVNVKVEG 297
C+ I MP N++IG NL Y G G
Sbjct: 298 CSRQAPSRIKLSNINFNNIRGTSTGKVAVVIACSHGMPCSNMKIGEINLSYRGA-----G 352
Query: 298 PETTSLCSNVKPTLFGKQIPA 318
TS CSNVKPT GKQ+PA
Sbjct: 353 GPATSTCSNVKPTFSGKQVPA 373
>sp|Q39786|PGLR_GOSHI Polygalacturonase OS=Gossypium hirsutum GN=G9 PE=2 SV=1
Length = 407
Score = 218 bits (555), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 142/392 (36%), Positives = 190/392 (48%), Gaps = 76/392 (19%)
Query: 2 LLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKG 61
++ + F LL+ FI++ + V V FGA ADG TD SK F +W+EA
Sbjct: 7 IVPSMFVLLLLFISASKVQSDAFDV--VAKFGAKADGKTDLSKPFLDAWKEAC-ASVTPS 63
Query: 62 TVLVPPGKYLVSFAEFEGPCKASISFQLQGLLD---------------LFSIDTSLSLAK 106
TV++P G YL+S EGPCKA I +QG + +S++
Sbjct: 64 TVVIPKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPNWVRFYSVENFKMFGG 123
Query: 107 GTFHGQGETAWPLNQC-HKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNL 165
G F GQG A+ N C ++ +LP IRF+FL ++ I I S DS+ FHIN+ C N+
Sbjct: 124 GIFDGQGSIAYEKNTCENREFRSKLPVNIRFDFLTNALIQDITSKDSKLFHINVFACKNI 183
Query: 166 KLNDLKITAH---------------------------------ADSSKDILVSEVFCGPG 192
L LKI A D +K++++ E+ CGPG
Sbjct: 184 TLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMVIKEITCGPG 243
Query: 193 QGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNV 252
GIS+GSLGK +E V G+ + NCT T TSNG R+KTWP H G S FEDI MNNV
Sbjct: 244 HGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGGAVSEIHFEDITMNNV 303
Query: 253 ENPIVIDQLYCPYNKC--NIKPKDSMPNIEIGN---------------------RNLVYN 289
+PI+IDQ YCP+NKC N + K + NI N +N+
Sbjct: 304 SSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAIKFICSGSSPCQNVELA 363
Query: 290 GVNVKVEGPE-TTSLCSNVKPTLFGKQIPATC 320
+++K G E TS C NVKP GK P C
Sbjct: 364 DIDIKHNGAEPATSQCLNVKPITSGKLNPIPC 395
>sp|Q39766|PGLR_GOSBA Polygalacturonase OS=Gossypium barbadense GN=G9 PE=2 SV=1
Length = 407
Score = 216 bits (550), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 139/398 (34%), Positives = 190/398 (47%), Gaps = 88/398 (22%)
Query: 2 LLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKG 61
++ + F LL+ FI++ + V V FGA ADG TD SK F +W+EA
Sbjct: 7 IVPSMFVLLLLFISASKVQPDAFDV--VAKFGAKADGKTDLSKPFLDAWKEAC-ASVTPS 63
Query: 62 TVLVPPGKYLVSFAEFEGPCKASISFQLQGLLD---------------LFSIDTSLSLAK 106
TV++P G YL+S EGPCKA I +QG + +S++
Sbjct: 64 TVVIPKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPNWVRFYSVENFKMFGG 123
Query: 107 GTFHGQGETAWPLNQC-HKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNL 165
G F GQG A+ N C ++ +LP IRF+F+ ++ I I S DS+ FHIN+ C N+
Sbjct: 124 GIFDGQGSIAYEKNTCENREFRSKLPVNIRFDFVTNALIQDITSKDSKLFHINVFACKNI 183
Query: 166 KLNDLKITAH---------------------------------ADSSKDILVSEVFCGPG 192
L LKI A D +K++++ E+ CGPG
Sbjct: 184 TLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMVIKEITCGPG 243
Query: 193 QGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNV 252
GIS+GSLGK +E V G+ + NCT T TSNG R+KTWP H G S FEDI MNNV
Sbjct: 244 HGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGGAVSEIHFEDITMNNV 303
Query: 253 ENPIVIDQLYCPYNKC----------------NIKPKDSMP--------------NIEIG 282
+PI+IDQ YCP+NKC NI+ ++P N+E+
Sbjct: 304 SSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAIKFICSGSSPCQNVELA 363
Query: 283 NRNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 320
+ ++ +NG TS C NVKP GK P C
Sbjct: 364 DIDIQHNGAE------PATSQCLNVKPITIGKLNPIPC 395
>sp|P24548|PGLR_OENOR Exopolygalacturonase (Fragment) OS=Oenothera organensis PE=2 SV=1
Length = 362
Score = 215 bits (547), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 133/360 (36%), Positives = 179/360 (49%), Gaps = 86/360 (23%)
Query: 41 DDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLL------- 93
D ++A T+W+EA T+LVP G + V EGPCK+SI QLQG L
Sbjct: 1 DSTQALTTAWKEAC-ASASPSTILVPKGNFAVGLITLEGPCKSSIGLQLQGTLKAPADPS 59
Query: 94 --------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSD-CQ-LPTPIRFNFLNDST 143
+L ID G F GQG++AW N CHKN C+ L +R + +S
Sbjct: 60 KIKGLGWINLNKIDLLTIFGGGVFDGQGKSAWVQNDCHKNGPICKTLSMNLRLYAVTNSI 119
Query: 144 ITGIKSVDSRYFHINILGCYNLKLNDLKITAH---------------------------- 175
+ + ++DS+ FH+N++GC NL KI+A
Sbjct: 120 LRDVTTLDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGVNIINTEIKTGD 179
Query: 176 -----ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKT 230
D SK+I ++ + CGPG GISVGSLG+ +E VVG+ V+NCT T + NGVR+KT
Sbjct: 180 DCISLGDGSKNINITNITCGPGHGISVGSLGRYKNEESVVGIYVKNCTITGSQNGVRIKT 239
Query: 231 WPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC----------------NIKP-- 272
WP S G AS F+DI MN+V PI+IDQ YCPYN+C NIK
Sbjct: 240 WPKSEPGEASEMHFQDITMNSVGTPILIDQGYCPYNQCTAEVPSSVKLSKISFKNIKGTS 299
Query: 273 ----------KDSMP--NIEIGNRNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 320
S P +E+ + +L Y+G +G TS+C N+KPT+ GKQIPA C
Sbjct: 300 TTKEAVKLVCSKSFPCNGVELADIDLTYSG-----KGGPATSVCENIKPTIKGKQIPAIC 354
>sp|P49063|PGLR2_ARATH Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana
GN=At3g07850 PE=1 SV=2
Length = 444
Score = 201 bits (512), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 141/376 (37%), Positives = 184/376 (48%), Gaps = 89/376 (23%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASI 85
++VK GA D TDDS AF +W+EA T+ VP G+Y+V EF+GPCK +
Sbjct: 69 AVDVKASGAKGDSKTDDSAAFAAAWKEACAAGS---TITVPKGEYMVESLEFKGPCKGPV 125
Query: 86 SFQLQG----------------LLDLFSI-DTSLSLAKGTFHGQGETAWPLNQCHKNSDC 128
+ +L G +D +I D +L+ K F GQG AW N C K C
Sbjct: 126 TLELNGNFKAPATVKTTKPHAGWIDFENIADFTLNGNKAIFDGQGSLAWKANDCAKTGKC 185
Query: 129 -QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH------------ 175
LP IRF L +S I I S +S+ FH+NIL C N+ L+D+ I A
Sbjct: 186 NSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIG 245
Query: 176 ---------------------ADSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTV 214
D +++++V V CGPG GIS+GSLG+ ++ V G+TV
Sbjct: 246 RSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTV 305
Query: 215 RNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC------ 268
R C T NGVR+KTWP S GIASN FEDI M+NV P++IDQ YCPY C
Sbjct: 306 RKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPS 365
Query: 269 NIKPKD----------------------SMP--NIEIGNRNLVYNGVNVKVEGPETTSLC 304
+K D +P NI + + NLV+NG EGP S C
Sbjct: 366 QVKLSDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNG----KEGP-AVSAC 420
Query: 305 SNVKPTLFGKQIPATC 320
SN+KP L GK +PA C
Sbjct: 421 SNIKPILSGKLVPAAC 436
>sp|Q05967|PGLR_TOBAC Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1
Length = 396
Score = 197 bits (500), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/399 (31%), Positives = 196/399 (49%), Gaps = 92/399 (23%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK 60
L F+L++ F+ ++ V ++ +GA ++ D S+A +++EA
Sbjct: 3 LKFKVHFALVLLFLAHFG--ESQTGVFDITKYGANSNA--DISEALLNAFKEACQSTS-P 57
Query: 61 GTVLVPPGKYLVSFAEFEGPCKASISFQLQGLLDLFSIDTSLSLAK-------------- 106
T+++P G + ++ + EGPCK+ + Q+Q L S + L + +
Sbjct: 58 STIVIPKGTFTMNQVKLEGPCKSPLELQIQATLKAPSDPSQLKVGEWLTVNKLDQFTMSG 117
Query: 107 -GTFHGQGETAWPLNQCHKNSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYN 164
G GQ AW +C ++ C +LP + FN L +STI I ++DS+ FH+N+ C N
Sbjct: 118 GGILDGQAAAAW---ECKQSKKCNKLPNNLSFNSLTNSTIKDITTLDSKSFHVNVNQCKN 174
Query: 165 LKLNDLKITAHA---------------------------------DSSKDILVSEVFCGP 191
L ++A A D ++ + ++ V CGP
Sbjct: 175 LTFIRFNVSAPANSPNTDGIHVSRSSSVNITDSNFSTGDDCISVGDETEQLYITRVTCGP 234
Query: 192 GQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNN 251
G GISVGSLG ++ VVG+ VRNCTFT T NGVR+KTWP SH G+ ++ FEDI++ N
Sbjct: 235 GHGISVGSLGGNPDEKPVVGVFVRNCTFTNTDNGVRIKTWPASHPGVVNDVHFEDIIVQN 294
Query: 252 VENPIVIDQLYCPYNKCN--------------------IKPKDSM----------PNIEI 281
V NP+VIDQ+YCP+NKCN + +D++ IE+
Sbjct: 295 VSNPVVIDQVYCPFNKCNKDLPSQVKISKVSFQNIKGTSRTQDAVSLLRSKGVPCEGIEV 354
Query: 282 GNRNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 320
G+ ++ Y+G EGP +S C N+KP+L GKQ P C
Sbjct: 355 GDIDITYSG----KEGPAKSS-CENIKPSLKGKQNPPVC 388
>sp|P35337|PGLR_BRANA Polygalacturonase OS=Brassica napus PE=2 SV=1
Length = 397
Score = 183 bits (465), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 117/338 (34%), Positives = 169/338 (50%), Gaps = 84/338 (24%)
Query: 63 VLVPPGKYLVSFAEFEGPCKASISFQLQGLLD-------------LFSIDTSLSL-AKGT 108
VL+P G + + GPCK+ I F LQG + +F L GT
Sbjct: 55 VLIPKGDFKLGETVMTGPCKSPIEFTLQGNVKTDGGSTQGKDRWVVFEKINGFKLNGGGT 114
Query: 109 FHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 167
F G+G AW N CHK +C+ LP +RF+F++++ I + S+D++ FH N++ N+
Sbjct: 115 FDGEGNAAWKANNCHKTFECKKLPISVRFDFVDNAEIKDVTSLDAKNFHFNVISGKNMTF 174
Query: 168 NDLKITAHADSS---------------------------------KDILVSEVFCGPGQG 194
+++KI A A+S K++L+ +V CGPG G
Sbjct: 175 DNIKIIAPAESPNTDGIHLGRCEGVKILNTKIATGDDCISVGDGMKNLLIEKVVCGPGHG 234
Query: 195 ISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSH-IGIASNFTFEDIVMNNVE 253
ISVGSLG+ +++V +TV+NCT TSNG+R+KTWP + A+ FEDI++N V
Sbjct: 235 ISVGSLGRYGWEQDVTDITVKNCTLEGTSNGLRIKTWPSAACTTTAAGIHFEDIILNKVS 294
Query: 254 NPIVIDQLYCPYNKCNI-KP-------------------KDSM----------PNIEIGN 283
NPI+IDQ YCP+N+CN KP KD++ N+EIG+
Sbjct: 295 NPILIDQEYCPWNQCNKNKPSTIKLVDITFRNIRGTSENKDAVKLLCSKGHPCENVEIGD 354
Query: 284 RNLVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 321
N+ Y G +GP T C+NV P L G Q P CV
Sbjct: 355 INIEYTG----PDGPPTFE-CTNVTPKLVGAQNPKACV 387
>sp|Q40312|PGLR_MEDSA Polygalacturonase OS=Medicago sativa PE=2 SV=1
Length = 421
Score = 183 bits (464), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/385 (32%), Positives = 185/385 (48%), Gaps = 83/385 (21%)
Query: 8 SLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPP 67
+++VSF+ A + VL++ FG + +D +A ++W EA +++P
Sbjct: 6 AIIVSFLFIADFCAAQSGVLDISKFGGKPN--SDIGQALTSAWNEACA-STTAAKIVIPA 62
Query: 68 GKYLVSFAEFEGPCKASISFQLQGLLD-----------------LFSIDTSLSLAKGTFH 110
G Y ++ E +GPCKA I Q+ G + L+ +LS KG F
Sbjct: 63 GTYQLNGIELKGPCKAPIELQVDGTIQAPADPSVIKGTEQWFKFLYMDHLTLS-GKGVFD 121
Query: 111 GQGETAW----PLNQ-CHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNL 165
GQG T + P + KNS+ ++ FNF+N+S + G+ S DS+ FH+ + GC N+
Sbjct: 122 GQGATVYKKAAPASAWSGKNSNSKVFMNFGFNFVNNSIVRGVTSKDSKNFHVMVFGCKNI 181
Query: 166 KLNDLKITAHADS---------------------------------SKDILVSEVFCGPG 192
+ ITA DS SK I V V CGPG
Sbjct: 182 TFDGFTITAPGDSPNTDGIHMGKSTDVKILNTNIGTGDDCVSIGDGSKQITVQGVNCGPG 241
Query: 193 QGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIA-SNFTFEDIVMNN 251
G+SVGSLGK +E V G+TV+NCT T T NGVR+KTWPD+ I S+ FEDI M N
Sbjct: 242 HGLSVGSLGKFTTEENVEGITVKNCTLTATDNGVRIKTWPDAPGTITVSDIHFEDITMTN 301
Query: 252 VENPIVIDQLYCPYNKCNIKPKDSMPNIEIGNRNLV-----------------------Y 288
V+NP++IDQ Y P+N+C+ K + +I +N+
Sbjct: 302 VKNPVIIDQEYYPWNQCSKKNPSKIKLSKISFKNVKGTSGTAEGVVLICSSAVPCDGVEL 361
Query: 289 NGVNVKVEGPETTSLCSNVKPTLFG 313
N V++K G TT+ C+NVKP + G
Sbjct: 362 NNVDLKFNGAPTTAKCTNVKPLVTG 386
>sp|P49062|PGLR1_ARATH Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana GN=PGA3
PE=2 SV=1
Length = 422
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/315 (33%), Positives = 160/315 (50%), Gaps = 54/315 (17%)
Query: 1 LLLAARFSLLVS---FITSVRGIDATN---RVLNVKDFGAVADGITDDSKAFDTSWREAW 54
+L+A F V+ ++ RG+ A + V ++ FGAV DG T+ KAF +W +
Sbjct: 20 ILMALVFGSCVANGEYLGGRRGLAANSGNPTVYDITKFGAVGDGSTNTFKAFLNTWIQVC 79
Query: 55 NWDGIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLLD------------LFS-IDTS 101
+ + T+LVP G +L F GPCK+ ++ + G + LF +D
Sbjct: 80 D-SPVPATLLVPKGTFLAGPVIFAGPCKSKVTVNVIGTIIATTSGYATPEWFLFERVDNL 138
Query: 102 LSLAKGTFHGQGETAWPLNQCHKNSDCQLP-TPIRFNFLNDSTITGIKSVDSRYFHINIL 160
+ GTFHG+GE W + C K C LP T ++F + + I GI SV+++ FH+ ++
Sbjct: 139 VLTGTGTFHGKGEAVWKADGCGKKVQCNLPPTSLKFRNMKNVEINGISSVNAKAFHMFLV 198
Query: 161 GCYNLKLNDLKITAHADS---------------------------------SKDILVSEV 187
N+ + ++K+TA A+S S ++ V V
Sbjct: 199 KTENVNIQNIKLTAPAESPNTDGIHLSNADNVSILDSTIATGDDCVSVGRGSNNVTVERV 258
Query: 188 FCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDI 247
CGPG G+SVGSLGK +E+V G+ V NCT T NG+R+KTW S A + FE+I
Sbjct: 259 ICGPGHGLSVGSLGKYKNEEDVSGIHVNNCTMIETDNGLRIKTWGGSDPSKAVDIKFENI 318
Query: 248 VMNNVENPIVIDQLY 262
+M +V+NPI+IDQ Y
Sbjct: 319 IMQSVKNPIIIDQNY 333
>sp|P35339|PGLR3_MAIZE Exopolygalacturonase OS=Zea mays GN=PG2C PE=2 SV=1
Length = 410
Score = 157 bits (398), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 165/363 (45%), Gaps = 77/363 (21%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASIS 86
++ GA +G TD +KA +W A G K T+L+P G +LV F GPCK ++
Sbjct: 41 FDITKLGASGNGKTDSTKAVQEAWASACGGTG-KQTILIPKGDFLVGPLNFTGPCKGDVT 99
Query: 87 FQLQGLL----------------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQ- 129
Q+ G L ++ +D + KG GQG W N C K DC+
Sbjct: 100 IQVNGNLLATTDLSQYKDHGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKI 159
Query: 130 LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----------- 178
LP + +F+N+ ++GI ++S++FH+N+ C ++ + D+ +TA DS
Sbjct: 160 LPNSLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDS 219
Query: 179 ----------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRN 216
+ + ++ V CGPG GIS+GSLG+ +++V + V++
Sbjct: 220 SGVTITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKD 279
Query: 217 CTFTCTSNGVRVKTWPD-SHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC------- 268
CT T+NGVR+K + D + + AS +E+I M + PI+ID YCP C
Sbjct: 280 CTLKKTANGVRIKAYEDAASVLTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASK 339
Query: 269 ---------NIKPKDSMPN-------IEIGNRNLVYNGVNVKVEGP--ETTSLCSNVKPT 310
NI S P +I + + VN+K G +T ++C N K +
Sbjct: 340 VTVKDVTFKNITGTSSTPEAVNLLCTAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGS 399
Query: 311 LFG 313
G
Sbjct: 400 AKG 402
>sp|P35338|PGLR2_MAIZE Exopolygalacturonase OS=Zea mays GN=PG9 PE=2 SV=1
Length = 410
Score = 157 bits (398), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 150/323 (46%), Gaps = 56/323 (17%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNR----VLNVKDFGAVADGITDDSKAFDTSWREAWNW 56
L L F ++ +GIDA ++ GA +G TD +KA +W A
Sbjct: 11 LFLLVLFCIVHGEKEESKGIDAKASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGG 70
Query: 57 DGIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLL----------------DLFSIDT 100
G K T+L+P G +LV F GPCK ++ Q+ G L ++ +D
Sbjct: 71 TG-KQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYKEHGNWIEILRVDN 129
Query: 101 SLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINI 159
+ KG GQG W N C K DC+ LP + +F+N+ ++G+ ++S++FH+N+
Sbjct: 130 LVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNM 189
Query: 160 LGCYNLKLNDLKITAHADS---------------------------------SKDILVSE 186
C N+ + D+ +TA DS + + ++
Sbjct: 190 YQCKNMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNITG 249
Query: 187 VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPD-SHIGIASNFTFE 245
V CGPG GIS+GSLG+ +++V + V++CT T GVR+K + D + + S +E
Sbjct: 250 VTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASVLTVSKIHYE 309
Query: 246 DIVMNNVENPIVIDQLYCPYNKC 268
+I M + NPI ID YCP C
Sbjct: 310 NIKMEDSANPIFIDMKYCPNKLC 332
>sp|P26216|PGLR1_MAIZE Exopolygalacturonase OS=Zea mays GN=PG1 PE=1 SV=1
Length = 410
Score = 155 bits (393), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 150/323 (46%), Gaps = 56/323 (17%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNR----VLNVKDFGAVADGITDDSKAFDTSWREAWNW 56
L L F ++ +GIDA ++ GA +G TD +KA +W A
Sbjct: 11 LFLLVLFCIVHGEKEESKGIDAKASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGG 70
Query: 57 DGIKGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLL----------------DLFSIDT 100
G K T+L+P G +LV F GPCK ++ Q+ G L ++ +D
Sbjct: 71 TG-KQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYKDHGNWIEILRVDN 129
Query: 101 SLSLAKGTFHGQGETAWPLNQCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINI 159
+ KG GQG W N C K DC+ LP + +F+N+ ++G+ ++S++FH+N+
Sbjct: 130 LVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNM 189
Query: 160 LGCYNLKLNDLKITAHADS---------------------------------SKDILVSE 186
C ++ + D+ +TA DS + + ++
Sbjct: 190 YRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNITG 249
Query: 187 VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPD-SHIGIASNFTFE 245
V CGPG GIS+GSLG+ +++V + V++CT T GVR+K + D + + S +E
Sbjct: 250 VTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASVLTVSKIHYE 309
Query: 246 DIVMNNVENPIVIDQLYCPYNKC 268
+I M + NPI ID YCP C
Sbjct: 310 NIKMEDSANPIFIDMKYCPNKLC 332
>sp|P48979|PGLR_PRUPE Polygalacturonase OS=Prunus persica PE=2 SV=1
Length = 393
Score = 151 bits (381), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 147/310 (47%), Gaps = 50/310 (16%)
Query: 7 FSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVP 66
FSL + F+ + A+ NV GA ADG TD +KAF ++W +A G + VP
Sbjct: 8 FSLSLIFVFMINSAIASPLTYNVASLGAKADGKTDSTKAFLSAWAKACASMN-PGVIYVP 66
Query: 67 PGKYLVSFAEFEGPCKA-SISFQLQGLLD---------------LFSIDTSLSLAKGTFH 110
G + + F GPCK +I+F++ G L F ++++ G
Sbjct: 67 AGTFFLRDVVFSGPCKNNAITFRIAGTLVAPSDYRVIGNAANWIFFHHVNGVTISGGILD 126
Query: 111 GQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 170
GQG W CH S T + F+ N+ ++G+ S++S+ FHI I N+++ +
Sbjct: 127 GQGTALWACKACHGESCPSGATTLGFSDSNNIVVSGLASLNSQMFHIVINDFQNVQMQGV 186
Query: 171 KITAHADS---------------------------------SKDILVSEVFCGPGQGISV 197
+++ +S + ++ + V CGPG GIS+
Sbjct: 187 RVSRSGNSPNTDGIHVQMSSGVTILNSKIATGDDCVSIGPGTSNLWIEGVACGPGHGISI 246
Query: 198 GSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIV 257
GSLGK ++ V +TV+ TF+ T NG+R+K+W G A N F+ M NVENPIV
Sbjct: 247 GSLGKEQEEAGVQNVTVKTVTFSGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIV 306
Query: 258 IDQLYCPYNK 267
IDQ YCP NK
Sbjct: 307 IDQHYCPDNK 316
>sp|Q94AJ5|PGLR5_ARATH Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana
GN=At1g80170 PE=1 SV=1
Length = 444
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 140/299 (46%), Gaps = 56/299 (18%)
Query: 23 TNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKY-LVSFAEFEGPC 81
+ R+L+V +FGA +G+TDD+KAF +W+ A + +K +LVP L+ + GPC
Sbjct: 49 SERLLHVGNFGAKGNGVTDDTKAFADAWKTACS-SKVKTRILVPENYTCLLRPIDLSGPC 107
Query: 82 KASISFQLQGL------------------LDLFSIDTSLSLAKGTFHGQGETAWPLNQCH 123
KA ++ Q+ G L + GT +G G+ W + H
Sbjct: 108 KARLTLQISGTIIAPNDPDVWEGLNRRKWLYFHGLSRLTVEGGGTVNGMGQEWWERSCKH 167
Query: 124 KNSD-CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--- 178
+S+ C+ PT + F+ + + + +DS+ HI + C + ++ LK+ A A S
Sbjct: 168 NHSNPCRGAPTALTFHKCKNMRVENLNVIDSQQMHIALTSCRRVTISGLKVIAPATSPNT 227
Query: 179 ------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEE 208
S I +S + CGPG GIS+GSLGK EE
Sbjct: 228 DGIHISVSRGIVIDNTTVSTGDDCISIVKNSTQISISNIICGPGHGISIGSLGKSKSWEE 287
Query: 209 VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK 267
V +TV + T+NGVR+KTW G+ S F +I MNNV NPI+IDQ YC K
Sbjct: 288 VRDITVDTAIISDTANGVRIKTWQGGS-GLVSKIIFRNIKMNNVSNPIIIDQYYCDSRK 345
>sp|P48978|PGLR_MALDO Polygalacturonase OS=Malus domestica PE=2 SV=1
Length = 460
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 157/342 (45%), Gaps = 62/342 (18%)
Query: 22 ATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPC 81
A + ++V DFGA +G DD++AF +W+ A + G ++VP YLV EF GPC
Sbjct: 94 APAKTISVDDFGAKGNG-ADDTQAFVKAWKAACSSSGAM-VLVVPQKNYLVRPIEFSGPC 151
Query: 82 KASISFQLQGLLD---------------LF-SIDTSLSLAKGTFHGQGETAWPLNQCHKN 125
K+ ++ Q+ G ++ +F ++ L + GT +G G W N C
Sbjct: 152 KSQLTLQIYGTIEASEDRSIYKDIDHWLIFDNVQNLLVVGPGTINGNGNIWWK-NSCKIK 210
Query: 126 SD----CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--- 178
PT + FN N+ + + D++ H+ C N++ + L +TA DS
Sbjct: 211 PQPPCGTYAPTAVTFNRCNNLVVKNLNIQDAQQIHVIFQNCINVQASCLTVTAPEDSPNT 270
Query: 179 ------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEE 208
S+ + +++ CGPG GIS+GSLG+ ++
Sbjct: 271 DGIHVTNTQNITISSSVIGTGDDCISIVSGSQRVQATDITCGPGHGISIGSLGEDGSEDH 330
Query: 209 VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
V G+ V + TSNG+R+KTW G A+N F+++ MN+V NPI+IDQ YC +
Sbjct: 331 VSGVFVNGAKLSGTSNGLRIKTWKGGS-GSATNIVFQNVQMNDVTNPIIIDQNYCDHKTK 389
Query: 269 NIKPKDSMPNIEIGNRNLVYNGVN-VKVEGPETTSLCSNVKP 309
+ K + S + +N++Y + G T CS P
Sbjct: 390 DCKQQKSAVQV----KNVLYQNIRGTSASGDAITLNCSQSVP 427
>sp|O23147|ADPG1_ARATH Polygalacturonase ADPG1 OS=Arabidopsis thaliana GN=ADPG1 PE=2 SV=1
Length = 431
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 162/321 (50%), Gaps = 64/321 (19%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
++V +FGA DG TDD++AF +W++A + +G+ T LVP GK YL+ F GPCK+
Sbjct: 67 TVSVSNFGAKGDGKTDDTQAFKKAWKKACSTNGVT-TFLVPKGKTYLLKSTRFRGPCKSL 125
Query: 85 ISFQLQGLLDLFSIDT---------------SLSL---AKGTFHGQGETAWPLNQCH--K 124
+FQ+ G L + + +LS+ + G +G G+T W N C K
Sbjct: 126 RNFQILGTLSASTKRSDYKDKNHWLILEDVNNLSIDGGSTGIINGNGKTWWQ-NSCKIDK 184
Query: 125 NSDC-QLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----- 178
+ C + PT + L + + ++ +++ I+I C +++++++ITA DS
Sbjct: 185 SKPCTKAPTALTLYNLKNLNVKNLRVKNAQQIQISIEKCNKVEVSNVEITAPGDSPNTDG 244
Query: 179 -----SKDILVS-----------------------EVFCGPGQGISVGSLGKGIKDEEVV 210
+++I VS ++ CGPG GIS+GSLG V
Sbjct: 245 IHITNTQNIRVSNSDIGTGDDCISIEDGTQNLQIFDLTCGPGHGISIGSLGDDNSKAYVS 304
Query: 211 GLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKCNI 270
G+ V F+ + NGVR+KT+ G A N F++I M NV+NPI+IDQ YC +KC
Sbjct: 305 GINVDGAKFSESDNGVRIKTYQGGS-GTAKNIKFQNIRMENVKNPIIIDQDYCDKDKC-- 361
Query: 271 KPKDSMPNIEIGNRNLVYNGV 291
+D +++ +N+VY +
Sbjct: 362 --EDQESAVQV--KNVVYKNI 378
>sp|P35336|PGLR_ACTDE Polygalacturonase OS=Actinidia deliciosa PE=2 SV=1
Length = 467
Score = 135 bits (340), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 144/303 (47%), Gaps = 58/303 (19%)
Query: 18 RGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEF 77
R +DA+ + +NV DFGA DG DD+KAF+ +W+ A + +LVP YLV F
Sbjct: 82 RVLDAS-KTVNVDDFGAKGDG-RDDTKAFEKAWKAACSSTS-SAVLLVPKKNYLVRPISF 138
Query: 78 EGPCKASISFQLQGLLD-----------------LFSIDTSLSLAKGTFHGQGETAWPLN 120
GPCK+ ++ Q+ G ++ S+ GT +G G+ W N
Sbjct: 139 SGPCKSGLTMQIYGTIEASDDRSDYRKDGRHWLVFDSVQNLRVEGGGTINGNGKIWWQ-N 197
Query: 121 QCHKNSD--CQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD 177
C N C+ PT + F + +K +++ H++ C N++ ++L +TA +
Sbjct: 198 SCKTNKALPCKDAPTALTFYKSKHVIVKNLKIENAQQIHVSFDNCVNVQASNLMVTAPEN 257
Query: 178 S---------------------------------SKDILVSEVFCGPGQGISVGSLGKGI 204
S S+ + V+++ CGPG GIS+GSLG G
Sbjct: 258 SPNTDGIHVTGTQNIHISSCVIGTGDDCISIVNGSRKVRVNDITCGPGHGISIGSLGYGN 317
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
+ V + V T+NGVR+KTW G ASN F+++ M+NVENPI+IDQ YC
Sbjct: 318 SEAHVSDVVVNGAKLCGTTNGVRIKTWQGGS-GSASNIKFQNVEMHNVENPIIIDQNYCD 376
Query: 265 YNK 267
+K
Sbjct: 377 QDK 379
>sp|Q9LW07|PGLR3_ARATH Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana
GN=At3g15720 PE=1 SV=1
Length = 456
Score = 132 bits (331), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 146/307 (47%), Gaps = 60/307 (19%)
Query: 20 IDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFE 78
I ++ L+V FGAV DG+TDDS+AF +W + G G +VP G +++ +F+
Sbjct: 17 IFTSSNALDVTQFGAVGDGVTDDSQAFLKAWEAVCSGTG-DGQFVVPAGMTFMLQPLKFQ 75
Query: 79 GPCKASISF-QLQGLL---------------DLFS-IDTSLSLAKGTFHGQGETAWPLNQ 121
G CK++ F Q+ G L LF+ I+ + G +GQG + W
Sbjct: 76 GSCKSTPVFVQMLGKLVAPSKGNWKGDKDQWILFTDIEGLVIEGDGEINGQGSSWWE--- 132
Query: 122 CHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--- 178
HK S PT ++F N+ ++G+ +DS HI+I C + ++ L+I A S
Sbjct: 133 -HKGSR---PTALKFRSCNNLRLSGLTHLDSPMAHIHISECNYVTISSLRINAPESSPNT 188
Query: 179 ------------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEE 208
+ +I +S + CGPG GIS+GSLGK +
Sbjct: 189 DGIDVGASSNVVIQDCIIATGDDCIAINSGTSNIHISGIDCGPGHGISIGSLGKDGETAT 248
Query: 209 VVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
V + V+NC F T NG R+KTW G A TF I ++NVENPI+IDQ Y +
Sbjct: 249 VENVCVQNCNFRGTMNGARIKTWQGGS-GYARMITFNGITLDNVENPIIIDQFYNGGDSD 307
Query: 269 NIKPKDS 275
N K + S
Sbjct: 308 NAKDRKS 314
>sp|P43212|PGLR2_CRYJA Polygalacturonase OS=Cryptomeria japonica PE=1 SV=1
Length = 514
Score = 132 bits (331), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 141/299 (47%), Gaps = 61/299 (20%)
Query: 21 DATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG--KYLVSFAEFE 78
DA N + NV+ +GAV DG D ++AF T+W+ A +L+ PG K++V+ F
Sbjct: 54 DAIN-IFNVEKYGAVGDGKHDCTEAFSTAWQAACK---KPSAMLLVPGNKKFVVNNLFFN 109
Query: 79 GPCKASISFQLQGLLDLFSIDTSLS----------------LAKGTFHGQGETAWP---- 118
GPC+ +F++ G++ + S + KG GQG+ W
Sbjct: 110 GPCQPHFTFKVDGIIAAYQNPASWKNNRIWLQFAKLTGFTLMGKGVIDGQGKQWWAGQCK 169
Query: 119 -LNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD 177
+N +D PT I+F+F I G+K ++S FH+ C +K+ + ITA D
Sbjct: 170 WVNGREICNDRDRPTAIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPRD 229
Query: 178 S---------------------------------SKDILVSEVFCGPGQGISVGSLGKGI 204
S S +I++ ++ CGPG GIS+GSLG+
Sbjct: 230 SPNTDGIDIFASKNFHLQKNTIGTGDDCVAIGTGSSNIVIEDLICGPGHGISIGSLGREN 289
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
EV + V F T NG+R+KTW G+AS+ +E++ M N ENPI+I+Q YC
Sbjct: 290 SRAEVSYVHVNGAKFIDTQNGLRIKTWQGGS-GMASHIIYENVEMINSENPILINQFYC 347
>sp|Q949Z1|PGLR4_ARATH Polygalacturonase At1g48100 OS=Arabidopsis thaliana GN=At1g48100
PE=2 SV=1
Length = 475
Score = 131 bits (329), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 135/304 (44%), Gaps = 64/304 (21%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK-YLVSFAEFEGPCKAS 84
V +V FGAV DG DD+ AF +W+ A + G VL P G + ++ F GPCK
Sbjct: 79 VFDVTSFGAVGDGSCDDTAAFQDAWKAACAVE--SGVVLAPEGGVFKITSTIFSGPCKPG 136
Query: 85 ISFQLQGLLD-------------------LFSIDTSLSLAKGTFHGQGETAWPLN-QCHK 124
+ FQL G+L + +D KGT G G+ W L + H+
Sbjct: 137 LVFQLDGVLMPPDGPEEWPEKDNKNQWLVFYRLDGFTFSGKGTVEGNGQKWWDLPCKPHR 196
Query: 125 NSD-------CQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA--- 174
D C PT IRF N+ + G++ +S FH+ GC + +N+++I++
Sbjct: 197 GPDGSSSSGPCASPTMIRFFMSNNIEVKGLRIQNSPQFHMKFDGCQGVLINEIQISSPKL 256
Query: 175 -------HADSSK-----------------------DILVSEVFCGPGQGISVGSLGKGI 204
H +++ D+ + V CGP GIS+GSLG
Sbjct: 257 SPNTDGIHLGNTRSVGIYNSVVSNGDDCISIGTGCSDVDIQGVTCGPSHGISIGSLGVHN 316
Query: 205 KDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCP 264
V +TVRN + NG+RVKTW G SN FE+I M NV N I++DQ YC
Sbjct: 317 SQACVSNITVRNTVIRDSDNGLRVKTW-QGGTGSVSNLLFENIQMENVLNCIIVDQYYCQ 375
Query: 265 YNKC 268
C
Sbjct: 376 SKDC 379
>sp|Q9SFB7|QRT2_ARATH Polygalacturonase QRT2 OS=Arabidopsis thaliana GN=QRT2 PE=1 SV=2
Length = 439
Score = 129 bits (323), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 132/292 (45%), Gaps = 56/292 (19%)
Query: 25 RVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKAS 84
R NV FGA A+G DDSKAF +W A + GI V Y++ F GPCK+S
Sbjct: 69 RSFNVNTFGAKANG-NDDSKAFMKAWEAACSSTGIVYIVAPKNRDYMLKAVTFSGPCKSS 127
Query: 85 -ISFQLQGLLDLFSIDTSLSLAK----------------GTFHGQGETAWPLNQCHKNSD 127
I F++ G ++ + + + G G G WP C N
Sbjct: 128 LIIFKIYGRIEAWENPSDYKERRHWIVFENVNNLRVEGGGRIDGNGHIWWP-KSCKINPQ 186
Query: 128 CQ---LPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS------ 178
PT + F N+ ++ I+ +++ H+ C N+K +L +T+ ADS
Sbjct: 187 LPCLGAPTAVTFVECNNLRVSNIRLENAQQMHLTFQDCKNVKALNLMVTSPADSPNTDGI 246
Query: 179 ---------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVG 211
S+++ + + CGPG GIS+GSLG+ + V
Sbjct: 247 HVSGTQNILIQDSIVRTGDDCISIVSGSENVRATGITCGPGHGISIGSLGEDNSEAYVSN 306
Query: 212 LTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
+ V T T+NGVR+KTW H G+A N F+DI+M NV NPI+I+Q YC
Sbjct: 307 VVVNKATLIGTTNGVRIKTWQGGH-GMAKNIIFQDIIMKNVTNPIIINQDYC 357
>sp|Q8RY29|ADPG2_ARATH Polygalacturonase ADPG2 OS=Arabidopsis thaliana GN=ADPG2 PE=2 SV=2
Length = 433
Score = 128 bits (322), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 154/321 (47%), Gaps = 58/321 (18%)
Query: 3 LAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGT 62
L R + + VR T ++V DFGA DG TDD++AF +W++A + +G
Sbjct: 44 LIKRREDITGLRSFVRASLRTPTTVSVSDFGAKGDGKTDDTQAFVNAWKKACSSNGAV-N 102
Query: 63 VLVPPGK-YLVSFAEFEGPCKASISFQLQGLLD---------------LFSIDTSLSL-- 104
+LVP G YL+ + GPC + ++ Q+ G L +F +LS+
Sbjct: 103 LLVPKGNTYLLKSIQLTGPCNSILTVQIFGTLSASQKRSDYKDISKWIMFDGVNNLSVDG 162
Query: 105 -AKGTFHGQGETAWPLNQCHKNSD---CQLPTPIRFNFLNDSTITGIKSVDSRYFHINIL 160
G G GET W N C +N + PT + F + +K +++ I+I
Sbjct: 163 GDTGVVDGNGETWWQ-NSCKRNKAKPCTKAPTALTFYNSKSLIVKNLKVRNAQQIQISIE 221
Query: 161 GCYNLKLNDLKITAHADS---------------------------------SKDILVSEV 187
C N++++++ +TA ADS S+++ ++++
Sbjct: 222 KCSNVQVSNVVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESGSQNVQINDI 281
Query: 188 FCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDI 247
CGPG GIS+GSLG V G+TV + T NGVR+KT+ G ASN F++I
Sbjct: 282 TCGPGHGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGS-GTASNIIFQNI 340
Query: 248 VMNNVENPIVIDQLYCPYNKC 268
M+NV+NPI+IDQ YC +KC
Sbjct: 341 QMDNVKNPIIIDQDYCDKSKC 361
>sp|Q02096|PGLR_PERAE Polygalacturonase OS=Persea americana PE=2 SV=1
Length = 462
Score = 128 bits (322), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 178/402 (44%), Gaps = 107/402 (26%)
Query: 6 RFSLLVSFITSVRGIDATNRV----------LNVKDFGAVADGITDDSKAFDTSWREAWN 55
FS ++ F S+ ++ N V ++V DFGA DG TDD+KAF+ +W++A +
Sbjct: 54 EFSSIMGFEPSILSLERFNPVGGPETSPDTDISVDDFGARGDG-TDDTKAFEKAWKDACS 112
Query: 56 WDGIKGTVLVPP--GKYLVSFAEFEGPCKASISFQLQGLLDL-----------------F 96
G+VL+ P YL+ F GPCK+ + +++G ++ F
Sbjct: 113 ----SGSVLIVPENKNYLLKQITFSGPCKSDLRVKIRGTIEASSDQSDWVGHNRKRWIEF 168
Query: 97 SIDTSLSL-AKGTFHGQGETAWPLNQCHKNS-DCQ-LPTPIRFNFLNDSTITGIKSVDSR 153
++L+L GT +G GET W + K S C+ PT + F + ++ + DS+
Sbjct: 169 EDISNLTLEGGGTSNGNGETWWDSSCKRKKSLPCKSAPTALTFRSCKNLIVSDLSIKDSQ 228
Query: 154 YFHINILGCYNLKLNDLKITAHADS---------------------------------SK 180
H++ C ++ ++L +TA S SK
Sbjct: 229 KMHLSFDKCQDVIASNLMVTAPEHSPNTDGIHITGTQRIHVMNSVIGTGDDCISIESGSK 288
Query: 181 DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIAS 240
++ + + CGPG GIS+GSLG + V G+ V T+NG+R+KTW G A
Sbjct: 289 MVIATNITCGPGHGISIGSLGDRNSEAHVSGVLVDGGNLFDTTNGLRIKTWQGGS-GSAK 347
Query: 241 NFTFEDIVMNNVENPIVIDQLY------CPYNKCNIKPKD-SMPNIE------------- 280
N F++IVM+NV NPI+IDQ Y CP + +K + + NI
Sbjct: 348 NIKFQNIVMHNVTNPIIIDQYYCDSKDPCPEQESAVKVSNVAYMNIRGTSASEVAVKFDC 407
Query: 281 ----------IGNRNLVYNGVNVKVEGPETTSLCSNVKPTLF 312
+GN NLV NG G ETT CSN+ L
Sbjct: 408 SKSSPCQGYIVGNINLVGNG------GKETTMSCSNIVQGLL 443
>sp|O22818|PGLR6_ARATH Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana
GN=At2g43860 PE=2 SV=1
Length = 405
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 138/295 (46%), Gaps = 57/295 (19%)
Query: 27 LNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEG-PCK-AS 84
LNV +GA DG D +KAF +W A T++VP G++LV F G CK A
Sbjct: 33 LNVLSYGAKPDGSKDSTKAFLAAWDVAC-ASANPTTIIVPKGRFLVGNLVFHGNECKQAP 91
Query: 85 ISFQLQGLLDL---------------FSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQ 129
IS ++ G + F T +S+ G QG + W +C N
Sbjct: 92 ISIRIAGSIVAPEDFRIIASSKHWIWFEDVTDVSIYGGILDAQGTSLW---KCKNNGGHN 148
Query: 130 LPTPIR---FNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA----------HA 176
PT + F+ N+ I+G+ S++S+ FHI I N+ ++ +K++A H
Sbjct: 149 CPTGAKSLVFSGSNNIKISGLTSINSQKFHIVIDNSNNVNIDGVKVSADENSPNTDGIHV 208
Query: 177 DSSK-----------------------DILVSEVFCGPGQGISVGSLGKGIKDEEVVGLT 213
+SS ++ + + CGPG GIS+GSLG+ +++ V +T
Sbjct: 209 ESSHSVHITNSRIGTGDDCISIGPGSTNVFIQTIRCGPGHGISIGSLGRAEEEQGVDNVT 268
Query: 214 VRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNKC 268
V N F T+NGVR+KTW A N F+ I M V+NPI+IDQ YC + C
Sbjct: 269 VSNVDFMGTNNGVRIKTWGKDSNSFARNIVFQHINMKMVKNPIIIDQHYCLHKPC 323
>sp|Q7M1E7|PGLR2_CHAOB Polygalacturonase OS=Chamaecyparis obtusa PE=1 SV=1
Length = 514
Score = 125 bits (313), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 133/294 (45%), Gaps = 60/294 (20%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGPCKAS 84
V NV+ +GAV DG D ++AF T+W A +LVP K+ V+ F GPC+
Sbjct: 58 VFNVEQYGAVGDGKHDSTEAFATTWNAACK--KASAVLLVPANKKFFVNNLVFRGPCQPH 115
Query: 85 ISFQLQGLLDL---------------FSIDTSLSL-AKGTFHGQGETAWPLNQCH----- 123
+SF++ G + F+ T +L G GQG+ W QC
Sbjct: 116 LSFKVDGTIVAQPDPARWKNSKIWLQFAQLTDFNLMGTGVIDGQGQQWW-AGQCKVVNGR 174
Query: 124 -KNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---- 178
+D PT I+ ++ T+ + ++S FH+ C +K+ LKI A DS
Sbjct: 175 TVCNDRNRPTAIKIDYSKSVTVKELTLMNSPEFHLVFGECEGVKIQGLKIKAPRDSPNTD 234
Query: 179 -----------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEV 209
S +I + ++ CGPG GIS+GSLG+ EV
Sbjct: 235 GIDIFASKRFHIEKCVIGTGDDCIAIGTGSSNITIKDLICGPGHGISIGSLGRDNSRAEV 294
Query: 210 VGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
+ V F T NG+R+KTW G+AS T+E++ M N ENPI+I+Q YC
Sbjct: 295 SHVHVNRAKFIDTQNGLRIKTWQGGS-GLASYITYENVEMINSENPILINQFYC 347
>sp|Q9FY19|PGLR2_JUNAS Polygalacturonase OS=Juniperus ashei GN=JNA2 PE=1 SV=1
Length = 507
Score = 124 bits (312), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 132/294 (44%), Gaps = 60/294 (20%)
Query: 26 VLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPG-KYLVSFAEFEGPCKAS 84
V NV+ +GAV DG D + AF+ +W A N + LVP K++V+ F GPC+
Sbjct: 59 VFNVEHYGAVGDGKHDSTDAFEKTWNAACN--KLSAVFLVPANKKFVVNNLVFYGPCQPH 116
Query: 85 ISFQLQGLLDLFSIDTSLSLAK----------------GTFHGQGETAWPLNQCHK---- 124
SF++ G + + +K G GQG W +QC
Sbjct: 117 FSFKVDGTIAAYPDPAKWKNSKIWMHFARLTDFNLMGTGVIDGQGNRWWS-DQCKTINGR 175
Query: 125 --NSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS---- 178
+D PT I+ +F T+ + +S FH+ C +K+ +KI A DS
Sbjct: 176 TVCNDKGRPTAIKIDFSKSVTVKELTLTNSPEFHLVFGECDGVKIQGIKIKAPRDSPNTD 235
Query: 179 -----------------------------SKDILVSEVFCGPGQGISVGSLGKGIKDEEV 209
S +I + ++ CGPG G+S+GSLGKG EV
Sbjct: 236 GIDIFASKRFEIEKCTIGTGDDCVAVGTGSSNITIKDLTCGPGHGMSIGSLGKGNSRSEV 295
Query: 210 VGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQLYC 263
+ + F T NG+R+KTW G+AS+ T+E++ M N ENPI+I+Q YC
Sbjct: 296 SFVHLDGAKFIDTQNGLRIKTWQGGS-GLASHITYENVEMINAENPILINQFYC 348
>sp|P05117|PGLR_SOLLC Polygalacturonase-2 OS=Solanum lycopersicum GN=PG2 PE=1 SV=1
Length = 457
Score = 114 bits (285), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 142/317 (44%), Gaps = 58/317 (18%)
Query: 3 LAARFSLLVSFITSVRGIDATNR----VLNVKDFGAVADGITDDSKAFDTSWREAWNWDG 58
A S L I S ID ++ V+NV FGA DG T D+ AF+ +W EA +
Sbjct: 48 FQAYLSYLSKNIESNNNIDKVDKNGIKVINVLSFGAKGDGKTYDNIAFEQAWNEACS-SR 106
Query: 59 IKGTVLVPPGK-YLVSFAEFEGPCKASISFQLQGLLDLFS-----IDTSLSLAKGTFHG- 111
+VP K YL+ F GPC++SIS ++ G L+ S D L +A +
Sbjct: 107 TPVQFVVPKNKNYLLKQITFSGPCRSSISVKIFGSLEASSKISDYKDRRLWIAFDSVQNL 166
Query: 112 ----------QGETAWPLN-QCHKNSDCQ-LPTPIRFNFLNDSTITGIKSVDSRYFHINI 159
G+ WP + + +K+ C+ PT + F + + +KS +++ HI
Sbjct: 167 VVGGGGTINGNGQVWWPSSCKINKSLPCRDAPTALTFWNCKNLKVNNLKSKNAQQIHIKF 226
Query: 160 LGCYNLKLNDLKITAHADS---------------------------------SKDILVSE 186
C N+ ++L I A A S S+++ +
Sbjct: 227 ESCTNVVASNLMINASAKSPNTDGVHVSNTQYIQISDTIIGTGDDCISIVSGSQNVQATN 286
Query: 187 VFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFED 246
+ CGPG GIS+GSLG G + V +TV NGVR+KTW G ASN F +
Sbjct: 287 ITCGPGHGISIGSLGSGNSEAYVSNVTVNEAKIIGAENGVRIKTWQGGS-GQASNIKFLN 345
Query: 247 IVMNNVENPIVIDQLYC 263
+ M +V+ PI+IDQ YC
Sbjct: 346 VEMQDVKYPIIIDQNYC 362
>sp|Q5ARE6|RHGA_EMENI Rhamnogalacturonase A OS=Emericella nidulans (strain FGSC A4 / ATCC
38163 / CBS 112.46 / NRRL 194 / M139) GN=rhgA PE=2 SV=2
Length = 507
Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 126/307 (41%), Gaps = 66/307 (21%)
Query: 3 LAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGT 62
+ + S V +TSV T + NV D+GAVAD TD A ++W E + G
Sbjct: 15 VKGQLSGSVGPLTSVSSKSQT-KTCNVLDYGAVADKSTDIGPALSSAWDECAD----GGV 69
Query: 63 VLVPPGKYLV-SFAEFEGPCKASISFQLQGLLDLFSIDTS--------------LSLAKG 107
V +PPG Y + ++ + G +I QL G++ D S +KG
Sbjct: 70 VYIPPGDYAIETWVKLSGGKACAI--QLDGIIYRTGTDGGNMIMIEHTSDFEFFSSTSKG 127
Query: 108 TFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGC----- 162
F G G + H P +R ++D ++ + VDS FH ++ C
Sbjct: 128 AFQGYGY------EFHAKGSSDGPRILRLYDVSDFSVHDVALVDSPLFHFSMDTCSNGEV 181
Query: 163 YNLKL--------------------NDLKITAHAD------SSKDILVSEVFCGPGQGIS 196
YN+ + +D+++T + SK+ILV ++C G +
Sbjct: 182 YNMAIRGGNMGGLDGIDVWSTNVWIHDVEVTNKDECVTVKSPSKNILVENIYCNWSGGCA 241
Query: 197 VGSLGKGIKDEEVVGLTVRNCTFTCTSNGV-RVKTWPDSHIGIASNFTFEDIVMNNVENP 255
+GSLG D ++ + RN +T SN + VK+ + G SN E+ + +
Sbjct: 242 MGSLG---TDTDISDIVYRN-VYTWKSNQMYMVKS--NGGSGTVSNLVLENFIGHGNAYS 295
Query: 256 IVIDQLY 262
+ ID +
Sbjct: 296 LDIDSAW 302
>sp|B8NK45|RHGA_ASPFN Probable rhamnogalacturonase A OS=Aspergillus flavus (strain ATCC
200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167)
GN=rhgA PE=3 SV=1
Length = 467
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 110/272 (40%), Gaps = 51/272 (18%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASISF 87
NV+D+GA AD TD A + +W + G V +P G Y +S KAS +
Sbjct: 41 NVQDYGAKADKETDIGSAIEKAWDDC----AEGGVVYIPSGDYAMSSRLKLSGGKAS-AI 95
Query: 88 QLQGLL--------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFL 139
QL G++ +LF I+ S + QG + HK+ P +RF +
Sbjct: 96 QLDGIIYRTGSDGGNLFMIEHSSDFEFFSSTSQGAIQGLGYEFHKDGSLNGPRLLRFYDV 155
Query: 140 NDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--------------------- 178
D ++ + VDS FH+++ C N ++ ++ I DS
Sbjct: 156 TDFSVHDVALVDSPAFHLSLDTCKNAEIYNMAIRG-GDSGGLDGVDIWSENVWVHDVEVT 214
Query: 179 -----------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVR 227
+K+ILV ++C G ++GSLG D + + RN +T SN +
Sbjct: 215 NKDECVTVKSPAKNILVENIYCNWSGGCAMGSLG---ADTNISDVVYRN-VYTWKSNQMY 270
Query: 228 VKTWPDSHIGIASNFTFEDIVMNNVENPIVID 259
+ + G SN E+ + + + ID
Sbjct: 271 MIK-SNGGSGSVSNLVLENFIGHGNAYSLDID 301
>sp|Q2U293|RHGA_ASPOR Probable rhamnogalacturonase A OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=rhgA PE=3 SV=1
Length = 467
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 110/272 (40%), Gaps = 51/272 (18%)
Query: 28 NVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGKYLVSFAEFEGPCKASISF 87
NV+D+GA AD TD A + +W + G V +P G Y + F+ + + +
Sbjct: 41 NVQDYGAKADKETDIGSAIEKAWDDC----AEGGVVYIPSGDYAM-FSRLKLSGGKASAI 95
Query: 88 QLQGLL--------DLFSIDTSLSLAKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFL 139
QL G++ +LF I+ S + QG + HK+ P +RF +
Sbjct: 96 QLDGIIYRTGSDGGNLFMIEHSSDFEFFSSTSQGAIQGLGYEFHKDGSLNGPRLLRFYDV 155
Query: 140 NDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS--------------------- 178
D ++ + VDS FH+++ C N ++ ++ I DS
Sbjct: 156 TDFSVHDVALVDSPAFHLSLDTCKNAEIYNMAIRG-GDSGGLDGVDIWSENVWVHDVEVT 214
Query: 179 -----------SKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVR 227
+K+ILV ++C G ++GSLG D + + RN +T SN +
Sbjct: 215 NKDECVTVKSPAKNILVENIYCNWSGGCAMGSLG---ADTNISDVVYRN-VYTWKSNQMY 270
Query: 228 VKTWPDSHIGIASNFTFEDIVMNNVENPIVID 259
+ + G SN E+ + + + ID
Sbjct: 271 MIK-SNGGSGSVSNLVLENFIGHGNAYSLDID 301
>sp|Q5ASG9|PGLX1_EMENI Exopolygalacturonase X-1 OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=pgaX-1
PE=1 SV=1
Length = 434
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 16/122 (13%)
Query: 178 SSKDILVSEVFCGPGQGISVGSLGKGIKDEEVV-GLTVRNCTFTCTSNGVRVKTWP---- 232
+S +ILV ++C GISVGSLG+ I + ++V + V N + S+ R+K WP
Sbjct: 253 NSTEILVQNLYCNGSHGISVGSLGQYIGEVDIVKNVLVYNISMYNASDMARIKVWPGVAS 312
Query: 233 --------DSHIGIASNFTFEDIVMNNVENPIVIDQLYCPYNK--CNIKPKD-SMPNIEI 281
+G SN T+ED+ + NV+ I I Q Y N CN P + ++ ++ I
Sbjct: 313 AMSEDLQGGGGLGSVSNITYEDMYIENVDWAIEITQCYGQKNMTLCNEYPSNLTISDVYI 372
Query: 282 GN 283
N
Sbjct: 373 SN 374
>sp|P26215|PGLR_COCCA Polygalacturonase OS=Cochliobolus carbonum GN=PGN1 PE=3 SV=1
Length = 364
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 64/129 (49%), Gaps = 7/129 (5%)
Query: 177 DSSKDILVSEVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHI 236
+S DI V+ C G G+S+GS+G G KD V G+ V T + NGVR+KT +
Sbjct: 209 NSGSDIHVTNCQCSGGHGVSIGSVG-GRKDNTVKGVVVSGTTIANSDNGVRIKTISGA-T 266
Query: 237 GIASNFTFEDIVMNNVEN-PIVIDQLYCPYNKCNIKPKDSMPNIEIGNRNLVYNGVNVKV 295
G S+ T+E+I + N+ IVI+Q Y KP +P + +N+ +V
Sbjct: 267 GSVSDITYENITLKNIAKYGIVIEQDYLNGGPTG-KPTTGVPITGVTLKNVAG---SVTG 322
Query: 296 EGPETTSLC 304
G E LC
Sbjct: 323 SGTEIYVLC 331
>sp|Q27UB1|PGXB_ASPNG Exopolygalacturonase B OS=Aspergillus niger GN=pgxB PE=3 SV=1
Length = 438
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 178 SSKDILVSEVFCGPGQGISVGSLGKGIKDEEVV-GLTVRNCTFTCTSNGVRVKTWPDSHI 236
++ +I V ++C G+S+GS+G+ + +++ + + N T NG R+K W +
Sbjct: 263 NTTNIFVQNMWCNNTHGVSMGSIGQYAGEMDIIENVYIENVTLLNGQNGARLKAWAGQDV 322
Query: 237 GIA--SNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNI 279
G +N T+++I + N + PIV+DQ Y N S NI
Sbjct: 323 GYGRINNVTYKNIQIQNTDAPIVLDQCYFDINATECAKYPSAVNI 367
>sp|A2QHG0|PGXB_ASPNC Probable exopolygalacturonase B OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=pgxB PE=3 SV=1
Length = 438
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 178 SSKDILVSEVFCGPGQGISVGSLGKGIKDEEVV-GLTVRNCTFTCTSNGVRVKTWPDSHI 236
++ +I V ++C G+S+GS+G+ + +++ + + N T NG R+K W +
Sbjct: 263 NTTNIFVQNMWCNNTHGVSMGSIGQYAGEMDIIENVYIENVTLLNGQNGARLKAWAGQDV 322
Query: 237 GIA--SNFTFEDIVMNNVENPIVIDQLYCPYNKCNIKPKDSMPNI 279
G +N T+++I + N + PIV+DQ Y N S NI
Sbjct: 323 GYGRINNVTYKNIQIQNTDAPIVLDQCYFDINATECAKYPSAVNI 367
>sp|Q0CFC7|RHGB_ASPTN Probable rhamnogalacturonase B OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=rhgB PE=3 SV=1
Length = 526
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 125/312 (40%), Gaps = 74/312 (23%)
Query: 2 LLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKG 61
L AAR S V +TS AT + NV D+GA AD TD +++ + G
Sbjct: 17 LAAARLSGSVGPLTSASAKAAT-KTCNVLDYGAAADKTTDLGAPLASAFADC----KTGG 71
Query: 62 TVLVPPGKY-LVSFAEFEGPCKASISFQLQGLL-------------------DLFSIDTS 101
V VPPG Y L S+A+ G + + Q+ G + +LFS
Sbjct: 72 LVYVPPGDYALESWAQLSG--GKAWALQIDGTIYRTGTDGGNMIFIEHSSDFELFS---- 125
Query: 102 LSLAKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILG 161
S + G G G + HK+ + P +R ++D + VDS FH+++
Sbjct: 126 -STSSGAMQGLGY------EFHKDDNWSGPRLLRLYDVSDFALHDFILVDSPSFHLSLDT 178
Query: 162 C-----YNLKL--------------------NDLKITAHAD------SSKDILVSEVFCG 190
C YN+ + +D+++T + +++ILV ++C
Sbjct: 179 CSNGEVYNMAIRGGNHGALDGVDVWSTNIWIHDVEVTNKDECVTVKSPAQNILVENIYCN 238
Query: 191 PGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMN 250
G +GSLG D + +T RN +T SN + + + G SN E+ + +
Sbjct: 239 WSGGCGMGSLG---ADTNISDITYRN-VYTWNSNQMMLIK-SNGGSGTVSNVVLENFIGH 293
Query: 251 NVENPIVIDQLY 262
+ ID +
Sbjct: 294 GNAYSLDIDSAW 305
>sp|B0YAA4|PGXB_ASPFC Probable exopolygalacturonase B OS=Neosartorya fumigata (strain
CEA10 / CBS 144.89 / FGSC A1163) GN=pgxB PE=3 SV=2
Length = 453
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 7/101 (6%)
Query: 178 SSKDILVSEVFCGPGQGISVGSLGK--GIKDEEVVGLTVRNCTFTCTSNGVRVKTW--PD 233
++ ++ V ++C G S+GS+G+ G+ D + + + N T NG R+K W PD
Sbjct: 263 NTTNVFVKNLWCNGTHGASMGSIGQYPGVLDI-IENVWIENVTLLNGENGARLKAWAGPD 321
Query: 234 SHIGIASNFTFEDIVMNNVENPIVIDQLYCPYN--KCNIKP 272
G +N T+++I + N +NPIV+DQ Y N +C P
Sbjct: 322 VGYGRINNVTYKNIHVENTDNPIVLDQCYFNINATQCAAYP 362
>sp|Q4WBK6|PGXB_ASPFU Probable exopolygalacturonase B OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pgxB
PE=3 SV=2
Length = 453
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 7/101 (6%)
Query: 178 SSKDILVSEVFCGPGQGISVGSLGK--GIKDEEVVGLTVRNCTFTCTSNGVRVKTW--PD 233
++ ++ V ++C G S+GS+G+ G+ D + + + N T NG R+K W PD
Sbjct: 263 NTTNVFVKNLWCNGTHGASMGSIGQYPGVLDI-IENVWIENVTLLNGENGARLKAWAGPD 321
Query: 234 SHIGIASNFTFEDIVMNNVENPIVIDQLYCPYN--KCNIKP 272
G +N T+++I + N +NPIV+DQ Y N +C P
Sbjct: 322 VGYGRINNVTYKNIHVENTDNPIVLDQCYFNINATQCAAYP 362
>sp|Q0C7H7|PGXB_ASPTN Probable exopolygalacturonase B OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=pgxB PE=3 SV=1
Length = 435
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 178 SSKDILVSEVFCGPGQGISVGSLGK--GIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSH 235
++ DI V ++C G+S+GS+G+ G+ D + + N T NG R+K W +
Sbjct: 262 NTTDIFVQNLWCNGTHGVSMGSIGQYPGVMDI-IEHAYIENVTLLNGQNGARLKAWAGEN 320
Query: 236 IGIA--SNFTFEDIVMNNVENPIVIDQLY 262
+G +N T+++I + N + P+V+DQ Y
Sbjct: 321 VGYGRINNITYKNIRIENTDKPVVLDQCY 349
>sp|Q2UFD2|RHGC_ASPOR Probable rhamnogalacturonase C OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=rhgC PE=3 SV=1
Length = 447
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 124/317 (39%), Gaps = 83/317 (26%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK 60
+L++A+ S V + + A N+ ++ D+GAVADG TD A +AW
Sbjct: 15 ILVSAQLSGSVGPLVDFK-TKAKNKTCDITDYGAVADGKTDVGPAI----LDAWGNCSTG 69
Query: 61 GTVLVPPGKYLVSFAEFEGPCKASISFQLQGLLDLFSIDTSLSLAKGTFHGQGETAWPLN 120
G + VPPG Y ++ + E S +FQL G+ LA+G H +
Sbjct: 70 GLIYVPPGTYSLA-TDLELKHGESTAFQLDGV-----------LARG--HEGSYQLILVR 115
Query: 121 QCHKNSDCQLPTP-----------------------IRFNFLNDSTITGIKSVDSRYFHI 157
CH DC+ + RF ++D ++ G ++DS +++
Sbjct: 116 NCH---DCEFFSGNSQGAVQGYGYEYLQDGNYGERLFRFQDVSDFSVHGFAAIDSPAYYL 172
Query: 158 NILGCYNLKLNDLKITAHAD--------------------------------SSKDILVS 185
N ++ +L + AD + D L+
Sbjct: 173 VFDTVSNGEIYNLLVRGIADLGMTDAFDIWGQNVWVHDIEVTNGDECVTVKSPASDFLIE 232
Query: 186 EVFCGPGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFE 245
++C G ++GSLG G + + RN + ++ +KT + GI N +E
Sbjct: 233 NIYCNLSGGTAIGSLGTGTN---ISNIHYRNL-YMNQADACYLKT--HNGDGIVKNIVWE 286
Query: 246 DIVMNNVENPIVIDQLY 262
+++++ P+ +++ +
Sbjct: 287 NVIVHRGPYPLAVNEAW 303
>sp|B8NGP8|RHGC_ASPFN Probable rhamnogalacturonase C OS=Aspergillus flavus (strain ATCC
200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167)
GN=rhgC PE=3 SV=2
Length = 447
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 122/301 (40%), Gaps = 51/301 (16%)
Query: 1 LLLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIK 60
+L++A+ S V + + A N+ ++ D+GAVADG TD A +AW
Sbjct: 15 ILVSAQLSGSVGPLVDFK-TKAKNKTCDITDYGAVADGKTDVGPAI----LDAWGNCSTG 69
Query: 61 GTVLVPPGKYLVSFAEFEGPCKASISFQLQGLLDL-FSIDTSLSLAKGT-----FHGQGE 114
G + VPPG Y ++ + E S +FQL G+L L L + F G +
Sbjct: 70 GLIYVPPGTYSLA-TDLELKHGESTAFQLDGVLARGHEGSYQLILVRNCHDCEFFSGNSQ 128
Query: 115 TAWPLNQCHKNSDCQLPTPI-RFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKIT 173
A D + RF ++D ++ G ++DS +++ N ++ +L +
Sbjct: 129 GAVQGYGYEYLQDGNYGERLFRFQDVSDFSVHGFAAIDSPAYYLVFDTVSNGEIYNLLVR 188
Query: 174 AHAD--------------------------------SSKDILVSEVFCGPGQGISVGSLG 201
AD + D L+ ++C G ++GSLG
Sbjct: 189 GIADLGMTDAFDIWGQNVWIHDIEVTNGDECVTVKSPASDFLIENIYCNLSGGTAIGSLG 248
Query: 202 KGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQL 261
G + + RN + ++ +KT + GI N +E+++++ P+ +++
Sbjct: 249 TGTN---ISNIHYRNL-YMNQADACYLKT--HNGDGIVKNIVWENVIVHGGPYPLAVNEA 302
Query: 262 Y 262
+
Sbjct: 303 W 303
>sp|Q873X6|PGXB_EMENI Probable exopolygalacturonase B OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=pgxB
PE=2 SV=1
Length = 440
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 178 SSKDILVSEVFCGPGQGISVGSLGK--GIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSH 235
++ +I V ++C G+S+GS+G+ G+ D + + N T NG R+K W
Sbjct: 268 NTTNIFVQNLWCNNTHGVSMGSIGQYPGVLDI-IEHAYIENVTLLNGENGARLKAWAGED 326
Query: 236 IGIA--SNFTFEDIVMNNVENPIVIDQLY--CPYNKCNIKPKDSMPNIEIGNRNLVYNGV 291
+G +N T+++I + N + PIV+DQ Y P ++C P ++ N+V+ V
Sbjct: 327 VGYGRINNITYKNIHVENTDYPIVLDQCYFNIPADECASYPS------QVNVTNIVFENV 380
Query: 292 NVKVEGPE 299
G E
Sbjct: 381 YGTSSGAE 388
>sp|A1DAX2|PGXB_NEOFI Probable exopolygalacturonase B OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pgxB
PE=3 SV=1
Length = 453
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 7/101 (6%)
Query: 178 SSKDILVSEVFCGPGQGISVGSLGK--GIKDEEVVGLTVRNCTFTCTSNGVRVKTW--PD 233
++ ++ V ++C G S+GS+G+ G+ D + + + N T NG R+K W P+
Sbjct: 263 NTTNVFVQNLWCNGTHGTSMGSIGQYPGVLDI-IENVWIENVTLLNGENGARLKAWAGPN 321
Query: 234 SHIGIASNFTFEDIVMNNVENPIVIDQLYCPYN--KCNIKP 272
G +N T+++I + N +NPIV+DQ Y N +C P
Sbjct: 322 VGYGRINNVTYKNIHVENTDNPIVLDQCYFNINATQCAAYP 362
>sp|Q0CGP0|PGLRX_ASPTN Probable exopolygalacturonase X OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=pgaX PE=3 SV=1
Length = 434
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 16/122 (13%)
Query: 178 SSKDILVSEVFCGPGQGISVGSLGKGIKDEEVV-GLTVRNCTFTCTSNGVRVKTWP--DS 234
+S DILV + C GISVGSLG+ + ++V + V N + S+ R+K WP DS
Sbjct: 253 NSTDILVQNMHCNGSHGISVGSLGQYKGEIDIVKNILVYNISMYNASDMARIKVWPGVDS 312
Query: 235 HI----------GIASNFTFEDIVMNNVENPIVIDQLYCPYNK--CNIKPKD-SMPNIEI 281
+ G SN T++ + + NV+ I + Q Y N+ CN P + ++ ++ I
Sbjct: 313 ALSEDLQGGGGSGAVSNITYDRMYIENVDWAIEVTQCYGQKNQTLCNQYPSNLTISDVHI 372
Query: 282 GN 283
N
Sbjct: 373 KN 374
>sp|Q00359|PGLRX_COCCA Exopolygalacturonase OS=Cochliobolus carbonum GN=PGX1 PE=3 SV=1
Length = 446
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 16/122 (13%)
Query: 178 SSKDILVSEVFCGPGQGISVGSLGKGIKDEEVV-GLTVRNCTFTCTSNGVRVKTWPDSHI 236
+S +ILV + C GISVGSLG+ + ++V + VRN + + S+G R+K WP +
Sbjct: 258 NSTNILVQNLVCNGSHGISVGSLGQYPGEVDIVENILVRNISMSNASDGARIKVWPGASS 317
Query: 237 G------------IASNFTFEDIVMNNVENPIVIDQLYCPYN--KCNIKPKD-SMPNIEI 281
N T++ +++ NV+ I I Q Y N CN P + ++ +I I
Sbjct: 318 ALSGDLQGGGGSGAVRNVTYDGMIVKNVDYAIEITQCYGQKNLTLCNQFPSNLTISDITI 377
Query: 282 GN 283
N
Sbjct: 378 KN 379
>sp|Q1HAY5|PGLRB_ASPKA Probable endopolygalacturonase B OS=Aspergillus kawachii GN=pgaB
PE=3 SV=1
Length = 362
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 98/240 (40%), Gaps = 53/240 (22%)
Query: 60 KGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLLDLFSIDTSLSLAKGT-FHGQGETAWP 118
KGT ++ G+ + E++GP L+ + D ++ A G + G W
Sbjct: 66 KGTTVIFEGETTFGYKEWKGP-----------LISMSGTDITVKQASGAKINCDGARWW- 113
Query: 119 LNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS 178
+ N P + + L++S+ITG+K ++ +IL + L + D+ I A +
Sbjct: 114 -DGKGSNGGKTKPKFFQAHKLDESSITGLKIYNTPVQGFSILADH-LTITDVTIDDSAGT 171
Query: 179 SK-----------------------------------DILVSEVFCGPGQGISVGSLGKG 203
SK I + +C G G+S+GS+G G
Sbjct: 172 SKGHNTDAFDIGQSTYITIDGATVYNQDDCLAINSGEHITFTNGYCDGGHGLSIGSIG-G 230
Query: 204 IKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVEN-PIVIDQLY 262
D V +T+ N + NGVR+KT G N FEDI ++++ IV++Q Y
Sbjct: 231 RSDNTVNDVTISNSKVVNSQNGVRIKTIY-GKTGTVENVKFEDITLSDISKYGIVVEQDY 289
>sp|Q2TWN8|RHGB_ASPOR Probable rhamnogalacturonase B OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=rhgB PE=3 SV=1
Length = 532
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 125/313 (39%), Gaps = 74/313 (23%)
Query: 2 LLAARFSLLVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKG 61
L A S V +TS A + NV D+GA AD TD +++ + + G
Sbjct: 18 LALASLSGSVGPLTSAS-TKAATKTCNVLDYGAKADKTTDLGPPLASAFADCKS----GG 72
Query: 62 TVLVPPGKYLVS-FAEFEGPCKASISFQLQGLL-------------------DLFSIDTS 101
V VP G Y +S +A+ G + + Q+ G + +LFS
Sbjct: 73 LVYVPSGDYALSTWAKLSG--GKAWALQIDGTIYRTGTDGGNMIFIEHSSDFELFS---- 126
Query: 102 LSLAKGTFHGQGETAWPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILG 161
S + G G G + HK++ P +R + D ++ VD+ FH ++
Sbjct: 127 -STSSGAMQGLGY------EYHKDNKWSGPRLLRLYDVTDFSVHDFILVDAPAFHFSLDT 179
Query: 162 C-----YNLKL--------------------NDLKITAHAD------SSKDILVSEVFCG 190
C YN+ + +D+++T + SK+ILV ++C
Sbjct: 180 CTNGEVYNMAIRGGNHGGLDGVDVWSTNVWIHDIEVTNKDECVTVKSPSKNILVENIYCN 239
Query: 191 PGQGISVGSLGKGIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMN 250
G +GSLG KD ++ +T RN ++N + +K+ + G A+N FE+ + +
Sbjct: 240 WSGGCGMGSLG---KDTDISDITYRNIYTWNSNNMMFIKS--NGGSGSATNLLFENFIGH 294
Query: 251 NVENPIVIDQLYC 263
ID +
Sbjct: 295 GNAYSFDIDSYWA 307
>sp|A2QLQ5|RHGC_ASPNC Probable rhamnogalacturonase C OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=rhgC PE=3 SV=1
Length = 459
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 121/302 (40%), Gaps = 75/302 (24%)
Query: 10 LVSFITSVRGIDATNRVLNVKDFGAVADGITDDSKAFDTSWREAWNWDGIKGTVLVPPGK 69
LV + T R N+ N+ D+GAVADG TD S+A +AW + G V +PPG
Sbjct: 27 LVDYSTKAR-----NQTCNIIDYGAVADGKTDISQAL----LDAWGNCSVGGLVYIPPGN 77
Query: 70 Y-LVSFAEFEGPCKASI------------SFQLQGLLDLFSIDTSLSLAKGTFHGQGETA 116
Y L E + ++I S+Q+ + D + ++G G G
Sbjct: 78 YSLAEDIELKHGQSSAIQLDGVVMRGHRGSYQMILIRDCNDFEFFSGNSRGAIQGFGYE- 136
Query: 117 WPLNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHI-----------NIL----- 160
+ +D +R +N+ ++ G +DS ++I NIL
Sbjct: 137 ------YLQNDTYGERLLRIQEVNNFSVHGFALIDSPSYYIVFDTVTSGEVYNILIRGVT 190
Query: 161 ----------GCYNLKLNDLKITAHAD------SSKDILVSEVFCGPGQGISVGSLGKGI 204
N+ +D++++ + + + L+ ++C G ++GSLG G
Sbjct: 191 SVGATDAIDVWGENMWFHDIEVSNGDECVTVKSPAHNYLIENIYCNLSGGTAIGSLGTGT 250
Query: 205 KDEEV----VGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVENPIVIDQ 260
++ + + + F ++NG GI N +E+++++ P+ ID+
Sbjct: 251 NISDIHYRNLYMNQADACFLKSNNG----------DGIVKNIIWENVIVHGGPYPLAIDE 300
Query: 261 LY 262
+
Sbjct: 301 AW 302
>sp|Q2TW03|PGXB_ASPOR Probable exopolygalacturonase B OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=pgxB PE=3 SV=2
Length = 435
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 178 SSKDILVSEVFCGPGQGISVGSLGK--GIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSH 235
++ +I V + C G+S+GS+G+ G+ D + + N T NG R+K W
Sbjct: 262 NTTNIFVQNLLCNNTHGVSMGSIGQYPGVMDI-IEHAYIENVTLLNGQNGARLKAWAGQD 320
Query: 236 IGIA--SNFTFEDIVMNNVENPIVIDQLY 262
+G +N T+++I + N + P+V+DQ Y
Sbjct: 321 VGYGRINNITYKNIRIENTDAPVVLDQCY 349
>sp|B8NX60|PGXB_ASPFN Probable exopolygalacturonase B OS=Aspergillus flavus (strain ATCC
200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167)
GN=pgxB PE=3 SV=1
Length = 435
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 178 SSKDILVSEVFCGPGQGISVGSLGK--GIKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSH 235
++ +I V + C G+S+GS+G+ G+ D + + N T NG R+K W
Sbjct: 262 NTTNIFVQNLLCNNTHGVSMGSIGQYPGVMDI-IEHAYIENVTLLNGQNGARLKAWAGQD 320
Query: 236 IGIA--SNFTFEDIVMNNVENPIVIDQLY 262
+G +N T+++I + N + P+V+DQ Y
Sbjct: 321 VGYGRINNITYKNIRIENTDAPVVLDQCY 349
>sp|Q9P4W3|PGLRB_ASPNG Endopolygalacturonase B OS=Aspergillus niger GN=pgaB PE=1 SV=1
Length = 362
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 97/240 (40%), Gaps = 53/240 (22%)
Query: 60 KGTVLVPPGKYLVSFAEFEGPCKASISFQLQGLLDLFSIDTSLSLAKGT-FHGQGETAWP 118
KGT ++ G+ + E++GP L+ + D ++ A G + G W
Sbjct: 66 KGTTVIFEGETTFGYKEWKGP-----------LISMSGTDITVKQASGAKINCDGARWW- 113
Query: 119 LNQCHKNSDCQLPTPIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS 178
+ N P + + L+ S+ITG+K ++ +IL + L + D+ I A +
Sbjct: 114 -DGKGSNGGKTKPKFFQAHKLDQSSITGLKVYNTPVQGFSILADH-LTITDVTIDNSAGT 171
Query: 179 SK-----------------------------------DILVSEVFCGPGQGISVGSLGKG 203
SK I + +C G G+S+GS+G G
Sbjct: 172 SKGHNTDAFDIGQSTYITIDGATVYNQDDCLAINSGEHITFTNGYCDGGHGLSIGSIG-G 230
Query: 204 IKDEEVVGLTVRNCTFTCTSNGVRVKTWPDSHIGIASNFTFEDIVMNNVEN-PIVIDQLY 262
D V +T+ N + NGVR+KT G N FEDI ++++ IV++Q Y
Sbjct: 231 RSDNTVNDVTISNSKVLNSQNGVRIKTIY-GKTGTVENVKFEDITLSDISKYGIVVEQDY 289
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 122,217,187
Number of Sequences: 539616
Number of extensions: 5283695
Number of successful extensions: 10683
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 131
Number of HSP's that attempted gapping in prelim test: 10392
Number of HSP's gapped (non-prelim): 216
length of query: 321
length of database: 191,569,459
effective HSP length: 117
effective length of query: 204
effective length of database: 128,434,387
effective search space: 26200614948
effective search space used: 26200614948
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)