RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 047952
(354 letters)
>d1lnqa2 f.14.1.1 (A:19-98) Potassium channel-related protein MthK
{Archaeon Methanothermobacter thermautotrophicus [TaxId:
145262]}
Length = 80
Score = 64.0 bits (156), Expect = 7e-14
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 70 RVLVYLAAYLGGGSLSFYAVNSQIEGLKTNEILDSIYFCIVTMTTVGYGDLVPNSVVSKL 129
R+L+ + A + G+ F+ IEG S+Y+ VT+ TVGYGD P++ +
Sbjct: 4 RILLLVLAVIIYGTAGFHF----IEGE---SWTVSLYWTFVTIATVGYGDYSPSTPLGMY 56
Query: 130 LSCAFVFTGMGLVGMFLSKAADYL 153
+ + G+G + + + ++L
Sbjct: 57 FTVTLIVLGIGTFAVAVERLLEFL 80
Score = 59.7 bits (145), Expect = 3e-12
Identities = 27/75 (36%), Positives = 36/75 (48%)
Query: 192 MLVLELVLILVGTIFLVVVEKMSFVDAFYCVCSTITTLGYGDKSFSTTGGRAFGVVWISS 251
+L+L L +I+ GT +E S+ + Y TI T+GYGD S ST G F V I
Sbjct: 5 ILLLVLAVIIYGTAGFHFIEGESWTVSLYWTFVTIATVGYGDYSPSTPLGMYFTVTLIVL 64
Query: 252 STMTLAQFFLYVAEF 266
T A + EF
Sbjct: 65 GIGTFAVAVERLLEF 79
>d1r3jc_ f.14.1.1 (C:) Potassium channel protein {Streptomyces
coelicolor [TaxId: 1902]}
Length = 103
Score = 57.2 bits (138), Expect = 3e-11
Identities = 20/91 (21%), Positives = 39/91 (42%)
Query: 68 FKRVLVYLAAYLGGGSLSFYAVNSQIEGLKTNEILDSIYFCIVTMTTVGYGDLVPNSVVS 127
V L L GS G + ++++ + T TTVGYGDL P ++
Sbjct: 8 AGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLYPVTLWG 67
Query: 128 KLLSCAFVFTGMGLVGMFLSKAADYLVDKQE 158
+ ++ + G+ G+ + A + V +++
Sbjct: 68 RCVAVVVMVAGITSFGLVTAALATWFVGREQ 98
Score = 49.5 bits (118), Expect = 2e-08
Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 7/91 (7%)
Query: 190 IIMLVLELVLILVGTIFLVVVEKM-------SFVDAFYCVCSTITTLGYGDKSFSTTGGR 242
VL ++++L G+ V+ E+ ++ A + T TT+GYGD T GR
Sbjct: 9 GAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLYPVTLWGR 68
Query: 243 AFGVVWISSSTMTLAQFFLYVAEFNTEKRQK 273
VV + + + +A + + Q+
Sbjct: 69 CVAVVVMVAGITSFGLVTAALATWFVGREQE 99
>d1xl4a2 f.14.1.1 (A:23-138) Inward rectifier potassium channel
kirbac3.1 {Magnetospirillum magnetotacticum [TaxId:
188]}
Length = 116
Score = 50.8 bits (121), Expect = 9e-09
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Query: 71 VLVYLAAYLGGGSLSFYAVNSQIEGLKTNEILDSIYFCIVTMTTVGYGDLVPNSVVSKLL 130
+YL + A IE + D+ +F + TM T+GYG L+P ++ L
Sbjct: 32 TGLYLVTNALFALA-YLACGDVIENARPGSFTDAFFFSVQTMATIGYGKLIPIGPLANTL 90
Query: 131 SCAFVFTGMGLVGMFLS 147
GM + + S
Sbjct: 91 VTLEALCGMLGLAVAAS 107
Score = 41.9 bits (98), Expect = 1e-05
Identities = 13/78 (16%), Positives = 27/78 (34%), Gaps = 10/78 (12%)
Query: 190 IIMLVLELVLILVGTIFLVV----------VEKMSFVDAFYCVCSTITTLGYGDKSFSTT 239
+ + ++ + ++ +F + SF DAF+ T+ T+GYG
Sbjct: 26 VFITLITGLYLVTNALFALAYLACGDVIENARPGSFTDAFFFSVQTMATIGYGKLIPIGP 85
Query: 240 GGRAFGVVWISSSTMTLA 257
+ + LA
Sbjct: 86 LANTLVTLEALCGMLGLA 103
>d1p7ba2 f.14.1.1 (A:36-151) Inward rectifier potassium channel
Kirbac1.1 {Burkholderia pseudomallei [TaxId: 28450]}
Length = 116
Score = 49.6 bits (118), Expect = 2e-08
Identities = 15/77 (19%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 71 VLVYLAAYLGGGSLSFYAVNSQIEGLKTNEILDSIYFCIVTMTTVGYGDLVPNSVVSKLL 130
+++ L + ++ I + + +F + T+ TVGYGD+ P +V + +
Sbjct: 33 AALFVVNNTLFALL-YQLGDAPIANQSPPGFVGAFFFSVETLATVGYGDMHPQTVYAHAI 91
Query: 131 SCAFVFTGMGLVGMFLS 147
+ +F GM + +
Sbjct: 92 ATLEIFVGMSGIALSTG 108
Score = 40.0 bits (93), Expect = 6e-05
Identities = 17/77 (22%), Positives = 28/77 (36%), Gaps = 10/77 (12%)
Query: 191 IMLVLELVLILVGTIFLVV----------VEKMSFVDAFYCVCSTITTLGYGDKSFSTTG 240
L + ++ T+F ++ FV AF+ T+ T+GYGD T
Sbjct: 28 FFASLAALFVVNNTLFALLYQLGDAPIANQSPPGFVGAFFFSVETLATVGYGDMHPQTVY 87
Query: 241 GRAFGVVWISSSTMTLA 257
A + I +A
Sbjct: 88 AHAIATLEIFVGMSGIA 104
>d2h8pc1 f.14.1.1 (C:22-78) Potassium channel protein {Streptomyces
coelicolor [TaxId: 1902]}
Length = 57
Score = 37.5 bits (87), Expect = 9e-05
Identities = 12/46 (26%), Positives = 17/46 (36%)
Query: 72 LVYLAAYLGGGSLSFYAVNSQIEGLKTNEILDSIYFCIVTMTTVGY 117
V L L GS G + ++++ T TTVGY
Sbjct: 12 TVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWACETATTVGY 57
Score = 25.2 bits (55), Expect = 2.5
Identities = 12/55 (21%), Positives = 26/55 (47%), Gaps = 8/55 (14%)
Query: 185 VRYKCIIMLVLEL-VLILVGTIFLVVVEKMS-------FVDAFYCVCSTITTLGY 231
+ ++ + L +++L G+ V+ E+ + + A + C T TT+GY
Sbjct: 3 LHWRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWACETATTVGY 57
>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 75
Score = 30.3 bits (68), Expect = 0.062
Identities = 10/48 (20%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Query: 293 DIDEDGVVSAAEFIIYKLKEMGKISQEDIALVMEEFQDLDFDQSGTLS 340
D + DG + E + +EDI + +D D + G +
Sbjct: 19 DKNADGFIDIEELGEILRATGEHVIEEDI---EDLMKDSDKNNDGRID 63
>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus
(Branchiostoma lanceolatum) [TaxId: 7740]}
Length = 68
Score = 29.8 bits (67), Expect = 0.066
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 293 DIDEDGVVSAAEFIIYKLKEMGKISQEDIALVMEEFQDLDFDQSGTLS 340
D + DGV+ EF ++++G+ D A V E ++ D D +G +
Sbjct: 12 DANGDGVIDFDEFKFI-MQKVGEEPLTD-AEVEEAMKEADEDGNGVID 57
Score = 24.4 bits (53), Expect = 6.2
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 273 KALVNWVLTRKMTHVDLEAADIDEDGVVSAAEFI 306
+ + LT ++ AD D +GV+ EF+
Sbjct: 29 QKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFM 62
>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD
{Soybean (Glycine max) [TaxId: 3847]}
Length = 182
Score = 31.6 bits (70), Expect = 0.084
Identities = 11/30 (36%), Positives = 21/30 (70%)
Query: 315 KISQEDIALVMEEFQDLDFDQSGTLSPSDL 344
++S+E+I + E F+ +D D SGT++ +L
Sbjct: 3 RLSEEEIGGLKELFKMIDTDNSGTITFDEL 32
>d1dava_ a.139.1.1 (A:) Cellulosome endoglucanase SS {Clostridium
thermocellum [TaxId: 1515]}
Length = 71
Score = 28.9 bits (65), Expect = 0.17
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 275 LVNWVLTRKMTHVDLEAADIDEDGVVSAAEFIIYKLKEMGKISQ 318
L +VL R ++ + AD++EDG V++ + I K + +I
Sbjct: 23 LKRYVL-RSGISINTDNADLNEDGRVNSTDLGILKRYILKEIDT 65
>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding
protein LAV1-2) {Physarum polycephalum [TaxId: 5791]}
Length = 321
Score = 31.1 bits (69), Expect = 0.19
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 316 ISQEDIALVMEEFQDLDFDQSGTLSPSDL 344
+S+ED ++ + F SG S DL
Sbjct: 116 LSEEDTNILRQLFLSSAVSGSGKFSFQDL 144
>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac
isoform [TaxId: 9031]}
Length = 81
Score = 28.4 bits (63), Expect = 0.33
Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Query: 293 DIDEDGVVSAAEFIIYKLKEMGKISQEDIALVMEEFQDLDFDQSGTLS 340
D + DG + E I I+++DI +M++ D + G +
Sbjct: 25 DKNADGYIDLEELKIMLQATGETITEDDIEELMKDG---DKNNDGRID 69
>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae
(Chlamydomonas reinhardtii) [TaxId: 3055]}
Length = 77
Score = 27.9 bits (62), Expect = 0.40
Identities = 6/48 (12%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Query: 293 DIDEDGVVSAAEFIIYKLKEMGKISQEDIALVMEEFQDLDFDQSGTLS 340
D D G ++ + + +++E++ E + D + +
Sbjct: 19 DDDNSGTITIKDLRRVAKELGENLTEEEL---QEMIAEADRNDDNEID 63
Score = 24.1 bits (52), Expect = 10.0
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 280 LTRKMTHVDLEAADIDEDGVVSAAEFI 306
LT + + AD ++D + EFI
Sbjct: 42 LTEEELQEMIAEADRNDDNEIDEDEFI 68
>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 67
Score = 27.6 bits (61), Expect = 0.43
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Query: 293 DIDEDGVVSAAEFIIYKLKEMGKISQEDIALVMEEFQDLDFDQSGTLS 340
D ++DG +S EF L +QEDI EE D D +G L+
Sbjct: 11 DKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEI---DVDGNGELN 55
>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 162
Score = 28.7 bits (63), Expect = 0.60
Identities = 10/48 (20%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Query: 293 DIDEDGVVSAAEFIIYKLKEMGKISQEDIALVMEEFQDLDFDQSGTLS 340
D + DG + E +++EDI +M++ D + G +
Sbjct: 106 DKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDS---DKNNDGRID 150
Score = 25.7 bits (55), Expect = 7.7
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 316 ISQEDIALVMEEFQDLDFDQSGTLSPSD 343
+S+E IA F D D G +S +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKE 41
>d2cclb1 a.139.1.1 (B:1-59) Endo-1,4-beta-xylanase Y {Clostridium
thermocellum [TaxId: 1515]}
Length = 59
Score = 26.9 bits (60), Expect = 0.63
Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 275 LVNWVL-TRKMTHVDLEAADIDEDGVVSAAEFIIYKLKEMGKI 316
L VL +T AD+D++G ++AA+ ++ + I
Sbjct: 17 LKRSVLRAITLTDDAKARADVDKNGSINAADVLLLSRYLLRVI 59
Score = 23.8 bits (52), Expect = 9.3
Identities = 10/52 (19%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Query: 293 DIDEDGVVSAAEFIIYKLKEMGKISQEDIALVMEEFQDLDFDQSGTLSPSDL 344
D++ DG +++ + + K + I+ D + D D++G+++ +D+
Sbjct: 2 DVNGDGTINSTDLTMLKRSVLRAITLTD-----DAKARADVDKNGSINAADV 48
>gi|148225444|ref|NP_001084009.1|(23-166:170) myosin light chain,
phosphorylatable, fast skeletal muscle [Xenopus laevis]
gi|27371289|gb|AAH41503.1| Mylpf-prov protein [Xenopus
laevis] gi|32450381|gb|AAH53808.1| Mylpf-prov protein
[Xenopus laevis] gi|45361043|ref|NP_989158.1| myosin,
light polypeptide 2, regulatory, cardiac, slow [Xenopus
(Silurana) tropicalis] gi|38494267|gb|AAH61602.1| Fast
skeletal myosin light chain 2 [Xenopus tropicalis]
gi|68342098|gb|AAY90073.1| MLC2 [Xenopus tropicalis]
gi|89272443|emb|CAJ83266.1| fast skeletal myosin light
chain 2 [Xenopus tropicalis] E=1e-68 s/c=1.81 id=86%
cov=100%
Length = 144
Score = 28.8 bits (63), Expect = 0.65
Identities = 8/28 (28%), Positives = 12/28 (42%)
Query: 317 SQEDIALVMEEFQDLDFDQSGTLSPSDL 344
Q I E F +D ++ G + DL
Sbjct: 2 DQTQIQEFKEAFTVIDQNRDGIIDKEDL 29
>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 81
Score = 27.3 bits (60), Expect = 0.70
Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Query: 293 DIDEDGVVSAAEFIIYKLKEMGKISQEDIALVMEEFQDLDFDQSGTLS 340
D D G +S E ++E++ ++EE D D SGT+
Sbjct: 24 DADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEV---DEDGSGTID 68
Score = 26.5 bits (58), Expect = 1.4
Identities = 8/37 (21%), Positives = 17/37 (45%)
Query: 277 NWVLTRKMTHVDLEAADIDEDGVVSAAEFIIYKLKEM 313
T++ +E D D G + EF++ +++M
Sbjct: 44 GQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQM 80
Score = 24.6 bits (53), Expect = 7.2
Identities = 10/36 (27%), Positives = 14/36 (38%)
Query: 316 ISQEDIALVMEEFQDLDFDQSGTLSPSDLFLAQDSQ 351
+S+E IA F D D G +S +L
Sbjct: 8 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRML 43
>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein
{Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}
Length = 185
Score = 28.8 bits (63), Expect = 0.73
Identities = 3/35 (8%), Positives = 5/35 (14%)
Query: 272 QKALVNWVLTRKMTHVDLEAADIDEDGVVSAAEFI 306
Q N+ L +
Sbjct: 128 QNYCKNFQLQCADVPAVYNVITDGGKVTFDLNRYK 162
>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD
{Soybean (Glycine max) [TaxId: 3847]}
Length = 87
Score = 27.2 bits (60), Expect = 0.83
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 293 DIDEDGVVSAAEFIIYKLKEMGKISQEDIALVMEEFQDLDFDQSGTLSPSDLFLA 347
D D G ++ E + ++ + +I +M+ D D+SGT+ + F+A
Sbjct: 33 DTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAA---DIDKSGTIDYGE-FIA 83
Score = 26.5 bits (58), Expect = 1.8
Identities = 11/30 (36%), Positives = 21/30 (70%)
Query: 315 KISQEDIALVMEEFQDLDFDQSGTLSPSDL 344
++S+E+I + E F+ +D D SGT++ +L
Sbjct: 16 RLSEEEIGGLKELFKMIDTDNSGTITFDEL 45
>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 146
Score = 28.3 bits (62), Expect = 0.90
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 316 ISQEDIALVMEEFQDLDFDQSGTLSPSDL 344
+++E IA E F D D +G++S S+L
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSISSSEL 32
>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 181
Score = 28.5 bits (62), Expect = 0.99
Identities = 10/59 (16%), Positives = 20/59 (33%), Gaps = 13/59 (22%)
Query: 284 MTHVDLEAADIDEDGVVSAAEFI--IYKLKEMGKISQEDIALVMEEFQDLDFDQSGTLS 340
+ + D G ++ +FI L+ + + F+ D DQ G +
Sbjct: 123 FHDILIRKFDRQGRGQIAFDDFIQGCIVLQRL-----------TDIFRRYDTDQDGWIQ 170
>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop
(Aequipecten irradians) [TaxId: 31199]}
Length = 142
Score = 27.7 bits (60), Expect = 1.3
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 316 ISQEDIALVMEEFQDLDFDQSGTLSPSD 343
+ Q+ I + E F +D D+ G +S D
Sbjct: 1 LPQKQIQEMKEAFSMIDVDRDGFVSKED 28
>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 165
Score = 27.7 bits (60), Expect = 1.4
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 308 YKLKEMGKISQEDIALVMEEFQDLDFDQSGTLSPSDL 344
Y L+ ++I + + F+ LD D SG+LS +
Sbjct: 2 YPLEMCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEF 38
>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId:
8010]}
Length = 107
Score = 26.8 bits (59), Expect = 1.6
Identities = 12/47 (25%), Positives = 17/47 (36%)
Query: 260 FLYVAEFNTEKRQKALVNWVLTRKMTHVDLEAADIDEDGVVSAAEFI 306
F+ E + + LT T L D D DG++ EF
Sbjct: 56 FIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFA 102
Score = 26.1 bits (57), Expect = 3.1
Identities = 9/48 (18%), Positives = 14/48 (29%)
Query: 293 DIDEDGVVSAAEFIIYKLKEMGKISQEDIALVMEEFQDLDFDQSGTLS 340
D D+ G + E ++ A D D D G +
Sbjct: 50 DQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIG 97
>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea
[TaxId: 1836]}
Length = 176
Score = 27.7 bits (60), Expect = 1.8
Identities = 6/54 (11%), Positives = 16/54 (29%), Gaps = 4/54 (7%)
Query: 257 AQFFLYVAEFNTEKRQKALVNWVLTRKMTHVDLEA----ADIDEDGVVSAAEFI 306
+ + + W+ M+ + D + +G +S E +
Sbjct: 106 GIVGMCDKNADGQINADEFAAWLTALGMSKAEAAEAFNQVDTNGNGELSLDELL 159
>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 108
Score = 26.8 bits (59), Expect = 1.9
Identities = 8/51 (15%), Positives = 14/51 (27%)
Query: 290 EAADIDEDGVVSAAEFIIYKLKEMGKISQEDIALVMEEFQDLDFDQSGTLS 340
D D+ G + E + K + + D D G +
Sbjct: 48 RFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIG 98
Score = 26.5 bits (58), Expect = 2.2
Identities = 14/47 (29%), Positives = 20/47 (42%)
Query: 260 FLYVAEFNTEKRQKALVNWVLTRKMTHVDLEAADIDEDGVVSAAEFI 306
+L E ++ LT T ++AAD D DG + A EF
Sbjct: 57 YLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQ 103
>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa
(Obelia longissima), obelin [TaxId: 32570]}
Length = 189
Score = 27.7 bits (60), Expect = 2.0
Identities = 5/28 (17%), Positives = 12/28 (42%)
Query: 317 SQEDIALVMEEFQDLDFDQSGTLSPSDL 344
+ I F LD + +G ++ ++
Sbjct: 9 NPRWIKRHKHMFDFLDINGNGKITLDEI 36
Score = 25.7 bits (55), Expect = 7.5
Identities = 4/27 (14%), Positives = 9/27 (33%)
Query: 280 LTRKMTHVDLEAADIDEDGVVSAAEFI 306
+++ D+D G + E
Sbjct: 140 PSQEDCEATFRHCDLDNAGDLDVDEMT 166
>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human
(Homo sapiens) [TaxId: 9606]}
Length = 83
Score = 25.9 bits (56), Expect = 2.2
Identities = 9/45 (20%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 301 SAAEFIIYKLKEMGKISQEDIALVMEEFQDLDFDQSGTLSPSDLF 345
+A I+ +L + ++ A+ +EF++ D ++ T+S +
Sbjct: 2 TADRDILARLHK--AVTSHYHAI-TQEFENFDTMKTNTISREEFR 43
>d2gs5a1 d.310.1.1 (A:1-193) Hypothetical protein DIP2367
{Corynebacterium diphtheriae [TaxId: 1717]}
Length = 193
Score = 27.4 bits (60), Expect = 2.3
Identities = 13/126 (10%), Positives = 37/126 (29%), Gaps = 10/126 (7%)
Query: 66 PNFKRVLVYLAAYLGGGSLSFYAVNSQIEGLKTNEILDSIYFCIVTMTTVGYGDLVPNSV 125
+F R ++ + + + + + ++ C+ + G +
Sbjct: 30 EDFARSVILIIEHSEYATFGV--NLASRSDVAVFNVIPEWVPCVTKPQALYIGGPLNQQS 87
Query: 126 VSKLLSCAFVFTGMGLVGMFLSKAADYLVDK-QEILLVKALHRYQKV-------GPTDIL 177
V + A + + +V+ + +K L ++ P +
Sbjct: 88 VVGVGVTAQGVDAARVDNLTRLANRLVMVNLGADPEEIKPLVSGMRLFAGHAEWAPGQLA 147
Query: 178 KEIETN 183
+EIE
Sbjct: 148 QEIENG 153
>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId:
8010]}
Length = 109
Score = 26.4 bits (58), Expect = 2.4
Identities = 11/59 (18%), Positives = 24/59 (40%), Gaps = 7/59 (11%)
Query: 288 DLEAA--DIDEDGVVSAAEFIIYKLKEMGKISQEDIALVMEEFQDLDFDQSGTLSPSDL 344
D++ A + +G + +F + + V + F+ +D D SG + +L
Sbjct: 10 DIKKALDAVKAEGSFNHKKFF-----ALVGLKAMSANDVKKVFKAIDADASGFIEEEEL 63
Score = 26.0 bits (57), Expect = 3.2
Identities = 9/54 (16%), Positives = 19/54 (35%), Gaps = 6/54 (11%)
Query: 290 EAADIDEDGVVSAAEF--IIYKLKEMG-KISQEDIALVMEEFQDLDFDQSGTLS 340
+A D D G + E ++ G ++ + ++ D D G +
Sbjct: 48 KAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAA---DKDGDGKIG 98
>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis
semifasciata) [TaxId: 30493]}
Length = 109
Score = 26.5 bits (58), Expect = 2.6
Identities = 18/68 (26%), Positives = 26/68 (38%), Gaps = 13/68 (19%)
Query: 284 MTHVDLEAADI-------DEDGVVSAAEFIIYKLKEMGKISQEDIALVMEEFQDLDFDQS 336
MT V L+A DI + G F + + + E F+ LD DQS
Sbjct: 2 MTKV-LKADDINKAISAFKDPGTFDYKRFFHLVGLKGK--TDAQV---KEVFEILDKDQS 55
Query: 337 GTLSPSDL 344
G + +L
Sbjct: 56 GFIEEEEL 63
>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica)
[TaxId: 5759]}
Length = 134
Score = 26.6 bits (57), Expect = 2.7
Identities = 6/29 (20%), Positives = 12/29 (41%)
Query: 278 WVLTRKMTHVDLEAADIDEDGVVSAAEFI 306
+ + AD + DG ++ EF+
Sbjct: 102 KKHGIEKVAEQVMKADANGDGYITLEEFL 130
>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens),
s100a6 [TaxId: 9606]}
Length = 89
Score = 25.6 bits (56), Expect = 3.0
Identities = 10/50 (20%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 292 ADIDEDG-VVSAAEFIIYKLKEMGKISQEDIALVMEEFQDLDFDQSGTLS 340
+ + D +S E KE+ S+ A + +DLD ++ ++
Sbjct: 19 SGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVN 68
>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 139
Score = 26.4 bits (57), Expect = 3.4
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
Query: 276 VNWVLTRKMTHVDLE---AADIDEDGVVSAAEFI 306
V L KMT ++E A D +G ++ F+
Sbjct: 102 VLTTLGEKMTEEEVETVLAGHEDSNGCINYEAFL 135
>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId:
9913]}
Length = 61
Score = 24.6 bits (53), Expect = 4.2
Identities = 7/30 (23%), Positives = 13/30 (43%)
Query: 277 NWVLTRKMTHVDLEAADIDEDGVVSAAEFI 306
LT L+ ++D +G + +FI
Sbjct: 31 GEKLTDAEVDELLKGVEVDSNGEIDYKKFI 60
>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein
{Leishmania major [TaxId: 5664]}
Length = 182
Score = 26.5 bits (57), Expect = 4.4
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 319 EDIALVMEEFQDLDFDQSGTLSPSDL 344
D +ME F+ +D D SG +S +L
Sbjct: 15 NDNQELMEWFRAVDTDGSGAISVPEL 40
>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein
{Jellyfish (Aequorea aequorea), aequorin [TaxId:
168712]}
Length = 187
Score = 26.1 bits (56), Expect = 4.8
Identities = 6/28 (21%), Positives = 12/28 (42%)
Query: 317 SQEDIALVMEEFQDLDFDQSGTLSPSDL 344
+ I F LD + +G +S ++
Sbjct: 7 NPRWIGRHKHMFNFLDVNHNGKISLDEM 34
Score = 25.3 bits (54), Expect = 9.1
Identities = 6/31 (19%), Positives = 10/31 (32%)
Query: 276 VNWVLTRKMTHVDLEAADIDEDGVVSAAEFI 306
+ + + DIDE G + E
Sbjct: 134 AGIIQSSEDCEETFRVCDIDESGQLDVDEMT 164
>d1su0b_ d.224.1.2 (B:) IscU homolog SPy0289 {Streptococcus pyogenes
[TaxId: 1314]}
Length = 136
Score = 25.7 bits (56), Expect = 5.3
Identities = 9/62 (14%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Query: 131 SCAFVFTGMGLVGMFLSKAADYLVDKQEILLVKALHRYQKVGPTDILKEIETNKVRYKCI 190
+ + + T ++G +A E++ + +++G ++L + R KC
Sbjct: 65 ASSSMMTDA-VIGKSKEEALALADIFSEMVQGQENPAQKELGEAELLAGVAKFPQRIKCS 123
Query: 191 IM 192
+
Sbjct: 124 TL 125
>d1cg2a1 c.56.5.4 (A:26-213,A:327-414) Carboxypeptidase G2,
catalytic domain {Pseudomonas sp., strain rs-16 [TaxId:
306]}
Length = 276
Score = 26.4 bits (57), Expect = 5.5
Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 7/53 (13%)
Query: 269 EKRQKALVNWVLTRKMTHVDL--EAADI-----DEDGVVSAAEFIIYKLKEMG 314
+KR L + + + +I D +G+ +A F+ +LK +G
Sbjct: 1 QKRDNVLFQAATDEQPAVIKTLEKLVNIETGTGDAEGIAAAGNFLEAELKNLG 53
>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId:
10117]}
Length = 109
Score = 25.3 bits (55), Expect = 6.0
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 280 LTRKMTHVDLEAADIDEDGVVSAAEFI 306
L+ K T + A D D DG + EF
Sbjct: 77 LSAKETKTLMAAGDKDGDGKIGVEEFS 103
>d1olma1 a.5.3.1 (A:1-75) Supernatant protein factor (SPF),
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 75
Score = 24.7 bits (54), Expect = 6.2
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 260 FLYVAEFNTEKRQKALVNWVLTRKMTHVD 288
+L F+ +K + L V RK +D
Sbjct: 41 WLRARSFDLQKSEAMLRKHVEFRKQKDID 69
>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 77
Score = 24.6 bits (53), Expect = 6.4
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 316 ISQEDIALVMEEFQDLDFDQSGTLSPSDLFLAQDS 350
+++E IA E F D D +G++S S+L S
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRS 38
>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 146
Score = 25.4 bits (54), Expect = 6.8
Identities = 5/18 (27%), Positives = 11/18 (61%)
Query: 289 LEAADIDEDGVVSAAEFI 306
L+ ++D +G + +FI
Sbjct: 123 LKGVEVDSNGEIDYKKFI 140
>d1vf6c_ a.194.1.1 (C:) Maguk p55 subfamily member 5, Patj {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 51
Score = 23.8 bits (51), Expect = 7.6
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 317 SQEDIALVMEEFQDLDFDQS 336
SQEDI+L+++ Q+ DF +
Sbjct: 24 SQEDISLLLQLVQNRDFQNA 43
>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein
{Sandworm (Nereis diversicolor) [TaxId: 126592]}
Length = 174
Score = 25.4 bits (54), Expect = 8.6
Identities = 7/28 (25%), Positives = 13/28 (46%)
Query: 317 SQEDIALVMEEFQDLDFDQSGTLSPSDL 344
S + + F +DFD+ G ++ D
Sbjct: 1 SDLWVQKMKTYFNRIDFDKDGAITRMDF 28
>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 141
Score = 24.9 bits (53), Expect = 9.6
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 289 LEAADIDEDGVVSAAEFI 306
++ AD D DG VS EF+
Sbjct: 121 IDEADRDGDGEVSEQEFL 138
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.136 0.386
Gapped
Lambda K H
0.267 0.0576 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,246,344
Number of extensions: 56877
Number of successful extensions: 284
Number of sequences better than 10.0: 1
Number of HSP's gapped: 282
Number of HSP's successfully gapped: 79
Length of query: 354
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 268
Effective length of database: 1,226,816
Effective search space: 328786688
Effective search space used: 328786688
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (24.5 bits)