BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047954
(582 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 152/288 (52%), Gaps = 16/288 (5%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITE-EFRKQLLVIADQKHPNLLPLLAYYF 334
LG+G FG YK L V VKRL++ + E +F+ ++ +I+ H NLL L +
Sbjct: 46 LGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCM 105
Query: 335 SNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRT 394
+ E+LLVY + NG++ + + S+ + + R R +A G AR L YLH
Sbjct: 106 TPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR--IALGSARGLAYLH----DHC 159
Query: 395 QSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP-----IAAQRMISYKSPEYQSSKK 449
+IH ++K+ NILLD+ +V D+G + L+ A + I + +PEY S+ K
Sbjct: 160 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGK 219
Query: 450 ISRKSDVWSFGCLLLELLTGRISTHSAPQGINGAD--LCSWVLRAVREEWTAEIFDSEIS 507
S K+DV+ +G +LLEL+TG+ + A + N D L WV ++E+ + D ++
Sbjct: 220 SSEKTDVFGYGVMLLELITGQRAFDLA-RLANDDDVMLLDWVKGLLKEKKLEALVDVDLQ 278
Query: 508 VQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTESTEE 555
+ +L+QVA+ C SP +RP+M+EVV LE + E EE
Sbjct: 279 GNYKDEE-VEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERWEE 325
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 152/288 (52%), Gaps = 16/288 (5%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITE-EFRKQLLVIADQKHPNLLPLLAYYF 334
LG+G FG YK L V VKRL++ + E +F+ ++ +I+ H NLL L +
Sbjct: 38 LGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 97
Query: 335 SNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRT 394
+ E+LLVY + NG++ + + S+ + + R R +A G AR L YLH
Sbjct: 98 TPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR--IALGSARGLAYLH----DHC 151
Query: 395 QSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP-----IAAQRMISYKSPEYQSSKK 449
+IH ++K+ NILLD+ +V D+G + L+ A + I + +PEY S+ K
Sbjct: 152 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGK 211
Query: 450 ISRKSDVWSFGCLLLELLTGRISTHSAPQGINGAD--LCSWVLRAVREEWTAEIFDSEIS 507
S K+DV+ +G +LLEL+TG+ + A + N D L WV ++E+ + D ++
Sbjct: 212 SSEKTDVFGYGVMLLELITGQRAFDLA-RLANDDDVMLLDWVKGLLKEKKLEALVDVDLQ 270
Query: 508 VQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTESTEE 555
+ +L+QVA+ C SP +RP+M+EVV LE + E EE
Sbjct: 271 GNYKDEE-VEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERWEE 317
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 138/277 (49%), Gaps = 19/277 (6%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
+G G+FG YK +L A V +KR EEF ++ ++ +HP+L+ L+ +
Sbjct: 47 IGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE 106
Query: 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
+E +L+YK+ NGNL ++G S + RL + G AR L YLH +
Sbjct: 107 RNEMILIYKYMENGNLKRHLYG--SDLPTMSMSWEQRLEICIGAARGLHYLHTR------ 158
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ------PIAAQRMISYKSPEYQSSKK 449
A+IH ++KS NILLD+N + ++D+G S + + + Y PEY +
Sbjct: 159 -AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGR 217
Query: 450 ISRKSDVWSFGCLLLELLTGRIS-THSAPQGINGADLCSWVLRAVREEWTAEIFDSEISV 508
++ KSDV+SFG +L E+L R + S P+ + +L W + + +I D ++
Sbjct: 218 LTEKSDVYSFGVVLFEVLCARSAIVQSLPREM--VNLAEWAVESHNNGQLEQIVDPNLA- 274
Query: 509 QRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
+ + K A++C S E RP M +V+ +LE
Sbjct: 275 DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 138/277 (49%), Gaps = 19/277 (6%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
+G G+FG YK +L A V +KR EEF ++ ++ +HP+L+ L+ +
Sbjct: 47 IGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE 106
Query: 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
+E +L+YK+ NGNL ++G S + RL + G AR L YLH +
Sbjct: 107 RNEMILIYKYMENGNLKRHLYG--SDLPTMSMSWEQRLEICIGAARGLHYLHTR------ 158
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ------PIAAQRMISYKSPEYQSSKK 449
A+IH ++KS NILLD+N + ++D+G S + + + Y PEY +
Sbjct: 159 -AIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGR 217
Query: 450 ISRKSDVWSFGCLLLELLTGRIS-THSAPQGINGADLCSWVLRAVREEWTAEIFDSEISV 508
++ KSDV+SFG +L E+L R + S P+ + +L W + + +I D ++
Sbjct: 218 LTEKSDVYSFGVVLFEVLCARSAIVQSLPREM--VNLAEWAVESHNNGQLEQIVDPNLA- 274
Query: 509 QRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
+ + K A++C S E RP M +V+ +LE
Sbjct: 275 DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 139/277 (50%), Gaps = 30/277 (10%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQ----LLVIADQKHPNLLPLLA 331
+G+G FG YK + V VK+L + + TEE ++Q + V+A +H NL+ LL
Sbjct: 39 MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
+ D+ LVY + NG+L +R+ + P R +A+G A + +LH
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP---PLSWHMRCKIAQGAANGINFLH---- 150
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGF---SSLVAQPIAAQRMI---SYKSPEYQ 445
++ IH ++KS NILLD+ +SD+G S AQ + R++ +Y +PE
Sbjct: 151 ---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEAL 207
Query: 446 SSKKISRKSDVWSFGCLLLELLTG--RISTHSAPQGINGADLCSWVLRAVREEWTAEIFD 503
+I+ KSD++SFG +LLE++TG + H PQ + L E+ + D
Sbjct: 208 RG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL----LDIKEEIEDEEKTIEDYID 262
Query: 504 SEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEV 540
+++ S + + + VA QC ++ KRP++ +V
Sbjct: 263 KKMNDADSTS--VEAMYSVASQCLHEKKNKRPDIKKV 297
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 139/277 (50%), Gaps = 30/277 (10%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQ----LLVIADQKHPNLLPLLA 331
+G+G FG YK + V VK+L + + TEE ++Q + V+A +H NL+ LL
Sbjct: 39 MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
+ D+ LVY + NG+L +R+ + P R +A+G A + +LH
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP---PLSWHMRCKIAQGAANGINFLH---- 150
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGF---SSLVAQPIAAQRMI---SYKSPEYQ 445
++ IH ++KS NILLD+ +SD+G S AQ + R++ +Y +PE
Sbjct: 151 ---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEAL 207
Query: 446 SSKKISRKSDVWSFGCLLLELLTG--RISTHSAPQGINGADLCSWVLRAVREEWTAEIFD 503
+I+ KSD++SFG +LLE++TG + H PQ + L E+ + D
Sbjct: 208 RG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL----LDIKEEIEDEEKTIEDYID 262
Query: 504 SEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEV 540
+++ S + + + VA QC ++ KRP++ +V
Sbjct: 263 KKMNDADSTS--VEAMYSVASQCLHEKKNKRPDIKKV 297
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 139/277 (50%), Gaps = 30/277 (10%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQ----LLVIADQKHPNLLPLLA 331
+G+G FG YK + V VK+L + + TEE ++Q + V+A +H NL+ LL
Sbjct: 33 MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 91
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
+ D+ LVY + NG+L +R+ + P R +A+G A + +LH
Sbjct: 92 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP---PLSWHMRCKIAQGAANGINFLH---- 144
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGF---SSLVAQPIAAQRMI---SYKSPEYQ 445
++ IH ++KS NILLD+ +SD+G S AQ + R++ +Y +PE
Sbjct: 145 ---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEAL 201
Query: 446 SSKKISRKSDVWSFGCLLLELLTG--RISTHSAPQGINGADLCSWVLRAVREEWTAEIFD 503
+I+ KSD++SFG +LLE++TG + H PQ + L E+ + D
Sbjct: 202 RG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL----LDIKEEIEDEEKTIEDYID 256
Query: 504 SEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEV 540
+++ S + + + VA QC ++ KRP++ +V
Sbjct: 257 KKMNDADSTS--VEAMYSVASQCLHEKKNKRPDIKKV 291
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 133/276 (48%), Gaps = 30/276 (10%)
Query: 277 GKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQ----LLVIADQKHPNLLPLLAY 332
G+G FG YK + V VK+L + + TEE ++Q + V A +H NL+ LL +
Sbjct: 31 GEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGF 89
Query: 333 YFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKS 392
D+ LVY + NG+L +R+ + P R +A+G A + +LH
Sbjct: 90 SSDGDDLCLVYVYXPNGSLLDRLSCLDGTP---PLSWHXRCKIAQGAANGINFLH----- 141
Query: 393 RTQSAVIHGNLKSTNILLDDNEMVLVSDYGF---SSLVAQPIAAQRMI---SYKSPEYQS 446
++ IH ++KS NILLD+ +SD+G S AQ + R++ +Y +PE
Sbjct: 142 --ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALR 199
Query: 447 SKKISRKSDVWSFGCLLLELLTG--RISTHSAPQGINGADLCSWVLRAVREEWTAEIFDS 504
+I+ KSD++SFG +LLE++TG + H PQ + E++ + +
Sbjct: 200 G-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKXND 258
Query: 505 EISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEV 540
S A + VA QC ++ KRP++ +V
Sbjct: 259 ADSTSVEAXY------SVASQCLHEKKNKRPDIKKV 288
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 127/278 (45%), Gaps = 35/278 (12%)
Query: 276 LGKGIFGNSYKALLEGRA-PVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYF 334
LG G +G Y+ + + + V VK L++ + EEF K+ V+ + KHPNL+ LL
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 335 SNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRT 394
++ +F GNL + + NR L +A ++ A+EYL K+
Sbjct: 81 REPPFYIITEFMTYGNLLDYLR----ECNRQEVNAVVLLYMATQISSAMEYLEKKN---- 132
Query: 395 QSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA-----QPIAAQRMISYKSPEYQSSKK 449
IH +L + N L+ +N +V V+D+G S L+ P A+ I + +PE + K
Sbjct: 133 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNK 189
Query: 450 ISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
S KSDVW+FG LL E+ T +S + G DL E+ + + ++
Sbjct: 190 FSIKSDVWAFGVLLWEIATYGMSPYP------GIDLSQ----------VYELLEKDYRME 233
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
R K+ ++ C +P RP AE+ E +
Sbjct: 234 RPEGCPE-KVYELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 127/278 (45%), Gaps = 35/278 (12%)
Query: 276 LGKGIFGNSYKALLEGRA-PVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYF 334
LG G +G Y+ + + + V VK L++ + EEF K+ V+ + KHPNL+ LL
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 335 SNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRT 394
++ +F GNL + + NR L +A ++ A+EYL K+
Sbjct: 82 REPPFYIITEFMTYGNLLDYLR----ECNRQEVNAVVLLYMATQISSAMEYLEKKN---- 133
Query: 395 QSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA-----QPIAAQRMISYKSPEYQSSKK 449
IH +L + N L+ +N +V V+D+G S L+ P A+ I + +PE + K
Sbjct: 134 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNK 190
Query: 450 ISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
S KSDVW+FG LL E+ T +S + G DL E+ + + ++
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMSPYP------GIDLSQ----------VYELLEKDYRME 234
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
R K+ ++ C +P RP AE+ E +
Sbjct: 235 RPEGCPE-KVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 129/287 (44%), Gaps = 35/287 (12%)
Query: 276 LGKGIFGNSYKALLEGRA-PVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYF 334
LG G +G Y+ + + + V VK L++ + EEF K+ V+ + KHPNL+ LL
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 335 SNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRT 394
++ +F GNL + + NR L +A ++ A+EYL K+
Sbjct: 287 REPPFYIITEFMTYGNLLDYLR----ECNRQEVSAVVLLYMATQISSAMEYLEKKN---- 338
Query: 395 QSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI-----AAQRMISYKSPEYQSSKK 449
IH NL + N L+ +N +V V+D+G S L+ A+ I + +PE + K
Sbjct: 339 ---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 395
Query: 450 ISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
S KSDVW+FG LL E+ T +S + G DL E+ + + ++
Sbjct: 396 FSIKSDVWAFGVLLWEIATYGMSPYP------GIDLSQ----------VYELLEKDYRME 439
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTESTEEE 556
R K+ ++ C +P RP AE+ E + S +E
Sbjct: 440 RPEGCPE-KVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE 485
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 136/301 (45%), Gaps = 39/301 (12%)
Query: 276 LGKGIFGNSYKALLEGRA-PVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYF 334
LG G +G Y+ + + + V VK L++ + EEF K+ V+ + KHPNL+ LL
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 335 SNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRT 394
++ +F GNL + + NR L +A ++ A+EYL K+
Sbjct: 284 REPPFYIITEFMTYGNLLDYLR----ECNRQEVNAVVLLYMATQISSAMEYLEKKN---- 335
Query: 395 QSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI-----AAQRMISYKSPEYQSSKK 449
IH NL + N L+ +N +V V+D+G S L+ A+ I + +PE + K
Sbjct: 336 ---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 392
Query: 450 ISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
S KSDVW+FG LL E+ T +S + G DL E+ + + ++
Sbjct: 393 FSIKSDVWAFGVLLWEIATYGMSPYP------GIDLSQ----------VYELLEKDYRME 436
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTESTEEEEDFWLDQSLTDES 569
R K+ ++ C +P RP AE+ E + S +E +++ L E+
Sbjct: 437 RPEGCPE-KVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE----VEKELGKEN 491
Query: 570 L 570
L
Sbjct: 492 L 492
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 136/301 (45%), Gaps = 39/301 (12%)
Query: 276 LGKGIFGNSYKALLEGRA-PVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYF 334
LG G +G Y+ + + + V VK L++ + EEF K+ V+ + KHPNL+ LL
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 335 SNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRT 394
++ +F GNL + + NR L +A ++ A+EYL K+
Sbjct: 326 REPPFYIITEFMTYGNLLDYLR----ECNRQEVNAVVLLYMATQISSAMEYLEKKN---- 377
Query: 395 QSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI-----AAQRMISYKSPEYQSSKK 449
IH NL + N L+ +N +V V+D+G S L+ A+ I + +PE + K
Sbjct: 378 ---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 434
Query: 450 ISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
S KSDVW+FG LL E+ T +S + G DL E+ + + ++
Sbjct: 435 FSIKSDVWAFGVLLWEIATYGMSPYP------GIDLSQ----------VYELLEKDYRME 478
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTESTEEEEDFWLDQSLTDES 569
R K+ ++ C +P RP AE+ E + S +E +++ L E+
Sbjct: 479 RPEG-CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE----VEKELGKEN 533
Query: 570 L 570
L
Sbjct: 534 L 534
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 126/278 (45%), Gaps = 35/278 (12%)
Query: 276 LGKGIFGNSYKALLEGRA-PVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYF 334
LG G +G Y+ + + + V VK L++ + EEF K+ V+ + KHPNL+ LL
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 335 SNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRT 394
++ +F GNL + + NR L +A ++ A+EYL K+
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLR----ECNRQEVNAVVLLYMATQISSAMEYLEKKN---- 136
Query: 395 QSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI-----AAQRMISYKSPEYQSSKK 449
IH +L + N L+ +N +V V+D+G S L+ A+ I + +PE + K
Sbjct: 137 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 450 ISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
S KSDVW+FG LL E+ T +S + G DL E+ + + ++
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYP------GIDLSQ----------VYELLEKDYRME 237
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
R K+ ++ C +P RP AE+ E +
Sbjct: 238 RPEGCPE-KVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 126/278 (45%), Gaps = 35/278 (12%)
Query: 276 LGKGIFGNSYKALLEGRA-PVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYF 334
LG G +G Y+ + + + V VK L++ + EEF K+ V+ + KHPNL+ LL
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 335 SNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRT 394
++ +F GNL + + NR L +A ++ A+EYL K+
Sbjct: 93 REPPFYIITEFMTYGNLLDYLR----ECNRQEVNAVVLLYMATQISSAMEYLEKKN---- 144
Query: 395 QSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI-----AAQRMISYKSPEYQSSKK 449
IH +L + N L+ +N +V V+D+G S L+ A+ I + +PE + K
Sbjct: 145 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 201
Query: 450 ISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
S KSDVW+FG LL E+ T +S + G DL E+ + + ++
Sbjct: 202 FSIKSDVWAFGVLLWEIATYGMSPYP------GIDLSQ----------VYELLEKDYRME 245
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
R K+ ++ C +P RP AE+ E +
Sbjct: 246 RPEGCPE-KVYELMRACWQWNPSDRPSFAEIHQAFETM 282
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 126/278 (45%), Gaps = 35/278 (12%)
Query: 276 LGKGIFGNSYKALLEGRA-PVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYF 334
LG G +G Y+ + + + V VK L++ + EEF K+ V+ + KHPNL+ LL
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 335 SNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRT 394
++ +F GNL + + NR L +A ++ A+EYL K+
Sbjct: 85 REPPFYIITEFMTYGNLLDYLR----ECNRQEVNAVVLLYMATQISSAMEYLEKKN---- 136
Query: 395 QSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI-----AAQRMISYKSPEYQSSKK 449
IH +L + N L+ +N +V V+D+G S L+ A+ I + +PE + K
Sbjct: 137 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 450 ISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
S KSDVW+FG LL E+ T +S + G DL E+ + + ++
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYP------GIDLSQ----------VYELLEKDYRME 237
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
R K+ ++ C +P RP AE+ E +
Sbjct: 238 RPEGCPE-KVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 126/278 (45%), Gaps = 35/278 (12%)
Query: 276 LGKGIFGNSYKALLEGRA-PVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYF 334
LG G +G Y+ + + + V VK L++ + EEF K+ V+ + KHPNL+ LL
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 335 SNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRT 394
++ +F GNL + + NR L +A ++ A+EYL K+
Sbjct: 85 REPPFYIITEFMTYGNLLDYLR----ECNRQEVNAVVLLYMATQISSAMEYLEKKN---- 136
Query: 395 QSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI-----AAQRMISYKSPEYQSSKK 449
IH +L + N L+ +N +V V+D+G S L+ A+ I + +PE + K
Sbjct: 137 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK 193
Query: 450 ISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
S KSDVW+FG LL E+ T +S + G DL E+ + + ++
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYP------GIDLSQ----------VYELLEKDYRME 237
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
R K+ ++ C +P RP AE+ E +
Sbjct: 238 RPEGCPE-KVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 126/278 (45%), Gaps = 35/278 (12%)
Query: 276 LGKGIFGNSYKALLEGRA-PVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYF 334
LG G +G Y+ + + + V VK L++ + EEF K+ V+ + KHPNL+ LL
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 335 SNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRT 394
++ +F GNL + + NR L +A ++ A+EYL K+
Sbjct: 84 REPPFYIITEFMTYGNLLDYLR----ECNRQEVNAVVLLYMATQISSAMEYLEKKN---- 135
Query: 395 QSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI-----AAQRMISYKSPEYQSSKK 449
IH +L + N L+ +N +V V+D+G S L+ A+ I + +PE + K
Sbjct: 136 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 192
Query: 450 ISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
S KSDVW+FG LL E+ T +S + G DL E+ + + ++
Sbjct: 193 FSIKSDVWAFGVLLWEIATYGMSPYP------GIDLSQ----------VYELLEKDYRME 236
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
R K+ ++ C +P RP AE+ E +
Sbjct: 237 RPEGCPE-KVYELMRACWQWNPSDRPSFAEIHQAFETM 273
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 126/278 (45%), Gaps = 35/278 (12%)
Query: 276 LGKGIFGNSYKALLEGRA-PVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYF 334
LG G +G Y+ + + + V VK L++ + EEF K+ V+ + KHPNL+ LL
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 335 SNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRT 394
++ +F GNL + + NR L +A ++ A+EYL K+
Sbjct: 85 REPPFYIITEFMTYGNLLDYLR----ECNRQEVNAVVLLYMATQISSAMEYLEKKN---- 136
Query: 395 QSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI-----AAQRMISYKSPEYQSSKK 449
IH +L + N L+ +N +V V+D+G S L+ A+ I + +PE + K
Sbjct: 137 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 450 ISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
S KSDVW+FG LL E+ T +S + G DL E+ + + ++
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYP------GIDLSQ----------VYELLEKDYRME 237
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
R K+ ++ C +P RP AE+ E +
Sbjct: 238 RPEGCPE-KVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 126/278 (45%), Gaps = 35/278 (12%)
Query: 276 LGKGIFGNSYKALLEGRA-PVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYF 334
LG G +G Y+ + + + V VK L++ + EEF K+ V+ + KHPNL+ LL
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 335 SNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRT 394
++ +F GNL + + NR L +A ++ A+EYL K+
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLR----ECNRQEVNAVVLLYMATQISSAMEYLEKKN---- 132
Query: 395 QSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI-----AAQRMISYKSPEYQSSKK 449
IH +L + N L+ +N +V V+D+G S L+ A+ I + +PE + K
Sbjct: 133 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK 189
Query: 450 ISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
S KSDVW+FG LL E+ T +S + G DL E+ + + ++
Sbjct: 190 FSIKSDVWAFGVLLWEIATYGMSPYP------GIDLSQ----------VYELLEKDYRME 233
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
R K+ ++ C +P RP AE+ E +
Sbjct: 234 RPEGCPE-KVYELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 126/278 (45%), Gaps = 35/278 (12%)
Query: 276 LGKGIFGNSYKALLEGRA-PVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYF 334
LG G +G Y+ + + + V VK L++ + EEF K+ V+ + KHPNL+ LL
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 335 SNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRT 394
++ +F GNL + + NR L +A ++ A+EYL K+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLR----ECNRQEVNAVVLLYMATQISSAMEYLEKKN---- 131
Query: 395 QSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI-----AAQRMISYKSPEYQSSKK 449
IH +L + N L+ +N +V V+D+G S L+ A+ I + +PE + K
Sbjct: 132 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 450 ISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
S KSDVW+FG LL E+ T +S + G DL E+ + + ++
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYP------GIDLSQ----------VYELLEKDYRME 232
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
R K+ ++ C +P RP AE+ E +
Sbjct: 233 RPEGCPE-KVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 126/278 (45%), Gaps = 35/278 (12%)
Query: 276 LGKGIFGNSYKALLEGRA-PVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYF 334
LG G +G Y+ + + + V VK L++ + EEF K+ V+ + KHPNL+ LL
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 335 SNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRT 394
++ +F GNL + + NR L +A ++ A+EYL K+
Sbjct: 82 REPPFYIITEFMTYGNLLDYLR----ECNRQEVNAVVLLYMATQISSAMEYLEKKN---- 133
Query: 395 QSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI-----AAQRMISYKSPEYQSSKK 449
IH +L + N L+ +N +V V+D+G S L+ A+ I + +PE + K
Sbjct: 134 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 190
Query: 450 ISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
S KSDVW+FG LL E+ T +S + G DL E+ + + ++
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMSPYP------GIDLSQ----------VYELLEKDYRME 234
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
R K+ ++ C +P RP AE+ E +
Sbjct: 235 RPEGCPE-KVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 128/278 (46%), Gaps = 35/278 (12%)
Query: 276 LGKGIFGNSYKALLEGRA-PVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYF 334
LG G FG Y+ + + + V VK L++ + EEF K+ V+ + KHPNL+ LL
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 335 SNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRT 394
++ +F GNL + + NR L +A ++ A+EYL K+
Sbjct: 78 REPPFYIITEFMTYGNLLDYLR----ECNRQEVSAVVLLYMATQISSAMEYLEKKN---- 129
Query: 395 QSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI-----AAQRMISYKSPEYQSSKK 449
IH +L + N L+ +N +V V+D+G S L+ A+ I + +PE + K
Sbjct: 130 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK 186
Query: 450 ISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
S KSDVW+FG LL E+ T +S + GI+ + + E+ + + ++
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPYP---GIDPSQV-------------YELLEKDYRME 230
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
R K+ ++ C +P RP AE+ E +
Sbjct: 231 RPEGCPE-KVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 126/278 (45%), Gaps = 35/278 (12%)
Query: 276 LGKGIFGNSYKALLEGRA-PVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYF 334
LG G +G Y+ + + + V VK L++ + EEF K+ V+ + KHPNL+ LL
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 335 SNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRT 394
++ +F GNL + + NR L +A ++ A+EYL K+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLR----ECNRQEVNAVVLLYMATQISSAMEYLEKKN---- 131
Query: 395 QSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI-----AAQRMISYKSPEYQSSKK 449
IH +L + N L+ +N +V V+D+G S L+ A+ I + +PE + K
Sbjct: 132 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 450 ISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
S KSDVW+FG LL E+ T +S + G DL E+ + + ++
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYP------GIDLSQ----------VYELLEKDYRME 232
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
R K+ ++ C +P RP AE+ E +
Sbjct: 233 RPEGCPE-KVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 126/278 (45%), Gaps = 35/278 (12%)
Query: 276 LGKGIFGNSYKALLEGRA-PVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYF 334
LG G +G Y+ + + + V VK L++ + EEF K+ V+ + KHPNL+ LL
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 335 SNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRT 394
++ +F GNL + + NR L +A ++ A+EYL K+
Sbjct: 85 REPPFYIITEFMTYGNLLDYLR----ECNRQEVSAVVLLYMATQISSAMEYLEKKN---- 136
Query: 395 QSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI-----AAQRMISYKSPEYQSSKK 449
IH +L + N L+ +N +V V+D+G S L+ A+ I + +PE + K
Sbjct: 137 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 450 ISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
S KSDVW+FG LL E+ T +S + G DL E+ + + ++
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYP------GIDLSQ----------VYELLEKDYRME 237
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
R K+ ++ C +P RP AE+ E +
Sbjct: 238 RPEGCPE-KVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 126/278 (45%), Gaps = 35/278 (12%)
Query: 276 LGKGIFGNSYKALLEGRA-PVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYF 334
LG G +G Y+ + + + V VK L++ + EEF K+ V+ + KHPNL+ LL
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 335 SNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRT 394
++ +F GNL + + NR L +A ++ A+EYL K+
Sbjct: 82 REPPFYIITEFMTYGNLLDYLR----ECNRQEVNAVVLLYMATQISSAMEYLEKKN---- 133
Query: 395 QSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI-----AAQRMISYKSPEYQSSKK 449
IH +L + N L+ +N +V V+D+G S L+ A+ I + +PE + K
Sbjct: 134 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 190
Query: 450 ISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
S KSDVW+FG LL E+ T +S + G DL E+ + + ++
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMSPYP------GIDLSQ----------VYELLEKDYRME 234
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
R K+ ++ C +P RP AE+ E +
Sbjct: 235 RPEGCPE-KVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 126/278 (45%), Gaps = 35/278 (12%)
Query: 276 LGKGIFGNSYKALLEGRA-PVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYF 334
LG G +G Y+ + + + V VK L++ + EEF K+ V+ + KHPNL+ LL
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 335 SNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRT 394
++ +F GNL + + NR L +A ++ A+EYL K+
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLR----ECNRQEVSAVVLLYMATQISSAMEYLEKKN---- 131
Query: 395 QSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI-----AAQRMISYKSPEYQSSKK 449
IH +L + N L+ +N +V V+D+G S L+ A+ I + +PE + K
Sbjct: 132 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 450 ISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
S KSDVW+FG LL E+ T +S + G DL E+ + + ++
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYP------GIDLSQ----------VYELLEKDYRME 232
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
R K+ ++ C +P RP AE+ E +
Sbjct: 233 RPEGCPE-KVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 126/278 (45%), Gaps = 35/278 (12%)
Query: 276 LGKGIFGNSYKALLEGRA-PVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYF 334
LG G +G Y+ + + + V VK L++ + EEF K+ V+ + KHPNL+ LL
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 335 SNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRT 394
++ +F GNL + + NR L +A ++ A+EYL K+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLR----ECNRQEVSAVVLLYMATQISSAMEYLEKKN---- 131
Query: 395 QSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI-----AAQRMISYKSPEYQSSKK 449
IH +L + N L+ +N +V V+D+G S L+ A+ I + +PE + K
Sbjct: 132 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 450 ISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
S KSDVW+FG LL E+ T +S + G DL E+ + + ++
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYP------GIDLSQ----------VYELLEKDYRME 232
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
R K+ ++ C +P RP AE+ E +
Sbjct: 233 RPEGCPE-KVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 126/278 (45%), Gaps = 35/278 (12%)
Query: 276 LGKGIFGNSYKALLEGRA-PVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYF 334
LG G +G Y+ + + + V VK L++ + EEF K+ V+ + KHPNL+ LL
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 335 SNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRT 394
++ +F GNL + + NR L +A ++ A+EYL K+
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLR----ECNRQEVSAVVLLYMATQISSAMEYLEKKN---- 131
Query: 395 QSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI-----AAQRMISYKSPEYQSSKK 449
IH +L + N L+ +N +V V+D+G S L+ A+ I + +PE + K
Sbjct: 132 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 450 ISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
S KSDVW+FG LL E+ T +S + G DL E+ + + ++
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYP------GIDLSQ----------VYELLEKDYRME 232
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
R K+ ++ C +P RP AE+ E +
Sbjct: 233 RPEGCPE-KVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 126/278 (45%), Gaps = 35/278 (12%)
Query: 276 LGKGIFGNSYKALLEGRA-PVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYF 334
LG G +G Y+ + + + V VK L++ + EEF K+ V+ + KHPNL+ LL
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 335 SNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRT 394
++ +F GNL + + NR L +A ++ A+EYL K+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLR----ECNRQEVSAVVLLYMATQISSAMEYLEKKN---- 131
Query: 395 QSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI-----AAQRMISYKSPEYQSSKK 449
IH +L + N L+ +N +V V+D+G S L+ A+ I + +PE + K
Sbjct: 132 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 450 ISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
S KSDVW+FG LL E+ T +S + G DL E+ + + ++
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYP------GIDLSQ----------VYELLEKDYRME 232
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
R K+ ++ C +P RP AE+ E +
Sbjct: 233 RPEGCPE-KVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 131/287 (45%), Gaps = 35/287 (12%)
Query: 276 LGKGIFGNSYKALLEGRA-PVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYF 334
LG G +G Y+ + + + V VK L++ + EEF K+ V+ + KHPNL+ LL
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 335 SNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRT 394
++ +F GNL + + NR L +A ++ A+EYL K+
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLR----ECNRQEVSAVVLLYMATQISSAMEYLEKKN---- 129
Query: 395 QSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI-----AAQRMISYKSPEYQSSKK 449
IH +L + N L+ +N +V V+D+G S L+ A+ I + +PE + K
Sbjct: 130 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK 186
Query: 450 ISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
S KSDVW+FG LL E+ T +S + GI+ + + E+ + + ++
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPYP---GIDPSQV-------------YELLEKDYRME 230
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTESTEEE 556
R K+ ++ C +P RP AE+ E + S +E
Sbjct: 231 RPEGCPE-KVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE 276
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 128/278 (46%), Gaps = 35/278 (12%)
Query: 276 LGKGIFGNSYKALLEGRA-PVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYF 334
LG G +G Y+ + + + V VK L++ + EEF K+ V+ + KHPNL+ LL
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 335 SNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRT 394
++ +F GNL + + NR L +A ++ A+EYL K+
Sbjct: 78 REPPFYIITEFMTYGNLLDYLR----ECNRQEVSAVVLLYMATQISSAMEYLEKKN---- 129
Query: 395 QSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI-----AAQRMISYKSPEYQSSKK 449
IH +L + N L+ +N +V V+D+G S L+ A+ I + +PE + K
Sbjct: 130 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNK 186
Query: 450 ISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
S KSDVW+FG LL E+ T +S + GI+ + + E+ + + ++
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPYP---GIDPSQV-------------YELLEKDYRME 230
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
R K+ ++ C +P RP AE+ E +
Sbjct: 231 RPEGCPE-KVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 133/283 (46%), Gaps = 37/283 (13%)
Query: 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAY 332
+ +G G FG YK G V + + P + F+ ++ V+ +H N+L L
Sbjct: 17 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 75
Query: 333 YFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKS 392
Y + + +V ++ +L++ +H ++ F + + +AR AR ++YLH K
Sbjct: 76 YSTKPQLAIVTQWCEGSSLYHHLHASETK-----FEMKKLIDIARQTARGMDYLHAK--- 127
Query: 393 RTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM------ISYKSPE--- 443
++IH +LKS NI L ++ V + D+G +++ ++ + + I + +PE
Sbjct: 128 ----SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 183
Query: 444 YQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGAD-LCSWVLRAVREEWTAEIF 502
Q S S +SDV++FG +L EL+TG++ + IN D + V R
Sbjct: 184 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN----INNRDQIIEMVGRGS--------L 231
Query: 503 DSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
++S RS +K L +C K ++RP +++E+E
Sbjct: 232 SPDLSKVRSNCPKRMKRLMA--ECLKKKRDERPSFPRILAEIE 272
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 138/284 (48%), Gaps = 39/284 (13%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
+G G FG YK G V + ++ D P + FR ++ V+ +H N+L L Y +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNIL-LFMGYMT 102
Query: 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
D +V ++ +L+ +H ++ F+ + +AR A+ ++YLH K+
Sbjct: 103 KDNLAIVTQWCEGSSLYKHLHVQETK-----FQMFQLIDIARQTAQGMDYLHAKN----- 152
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM------ISYKSPE---YQS 446
+IH ++KS NI L + V + D+G +++ ++ +Q++ + + +PE Q
Sbjct: 153 --IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQD 210
Query: 447 SKKISRKSDVWSFGCLLLELLTGRIS-THSAPQGINGAD-LCSWVLRAVREEWTAEIFDS 504
+ S +SDV+S+G +L EL+TG + +H IN D + V R ++++
Sbjct: 211 NNPFSFQSDVYSYGIVLYELMTGELPYSH-----INNRDQIIFMVGRGYASPDLSKLY-- 263
Query: 505 EISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548
++ M +L+ C K E+RP +++S +E+++
Sbjct: 264 -----KNCPKAMKRLVA---DCVKKVKEERPLFPQILSSIELLQ 299
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 132/283 (46%), Gaps = 37/283 (13%)
Query: 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAY 332
+ +G G FG YK G V + + P + F+ ++ V+ +H N+L L
Sbjct: 29 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 87
Query: 333 YFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKS 392
Y + + +V ++ +L++ +H ++ F + + +AR AR ++YLH K
Sbjct: 88 YSTKPQLAIVTQWCEGSSLYHHLHASETK-----FEMKKLIDIARQTARGMDYLHAK--- 139
Query: 393 RTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM------ISYKSPE--- 443
++IH +LKS NI L ++ V + D+G ++ ++ + + I + +PE
Sbjct: 140 ----SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 195
Query: 444 YQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGAD-LCSWVLRAVREEWTAEIF 502
Q S S +SDV++FG +L EL+TG++ + IN D + V R
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN----INNRDQIIEMVGRGS--------L 243
Query: 503 DSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
++S RS +K L +C K ++RP +++E+E
Sbjct: 244 SPDLSKVRSNCPKRMKRLMA--ECLKKKRDERPSFPRILAEIE 284
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 131/280 (46%), Gaps = 37/280 (13%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
+G G FG YK G V + + P + F+ ++ V+ +H N+L L Y +
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYST 90
Query: 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
+ +V ++ +L++ +H ++ F + + +AR AR ++YLH K
Sbjct: 91 APQLAIVTQWCEGSSLYHHLHASETK-----FEMKKLIDIARQTARGMDYLHAK------ 139
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM------ISYKSPE---YQS 446
++IH +LKS NI L ++ V + D+G ++ ++ + + I + +PE Q
Sbjct: 140 -SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 447 SKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGAD-LCSWVLRAVREEWTAEIFDSE 505
S S +SDV++FG +L EL+TG++ + IN D + V R +
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSN----INNRDQIIEMVGRGS--------LSPD 246
Query: 506 ISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
+S RS +K L +C K ++RP +++E+E
Sbjct: 247 LSKVRSNCPKRMKRLMA--ECLKKKRDERPSFPRILAEIE 284
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 131/291 (45%), Gaps = 49/291 (16%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLR-----DLKPLITEEFRKQLLVIADQKHPNLLP 328
E +G G FG Y+A G V VK R D+ I E R++ + A KHPN++
Sbjct: 13 EIIGIGGFGKVYRAFWIGDE-VAVKAARHDPDEDISQTI-ENVRQEAKLFAMLKHPNIIA 70
Query: 329 LLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLV--ARGVARALEYL 386
L LV +FA G L NR+ GK RIP +LV A +AR + YL
Sbjct: 71 LRGVCLKEPNLCLVMEFARGGPL-NRVLSGK----RIP----PDILVNWAVQIARGMNYL 121
Query: 387 HHKDKSRTQSAVIHGNLKSTNILLDD--------NEMVLVSDYGFSSLVAQP--IAAQRM 436
H + +IH +LKS+NIL+ N+++ ++D+G + + ++A
Sbjct: 122 HDE----AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGA 177
Query: 437 ISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREE 496
++ +PE + S+ SDVWS+G LL ELLTG + +GI+G +
Sbjct: 178 YAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF----RGIDGLAVA---------- 223
Query: 497 WTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
+ + + + + KL++ C N P RP ++ +L I
Sbjct: 224 YGVAMNKLALPIPSTCPEPFAKLME---DCWNPDPHSRPSFTNILDQLTTI 271
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 100/201 (49%), Gaps = 15/201 (7%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRL--RDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
E +G G FG ++A G + V VK L +D EF +++ ++ +HPN++ +
Sbjct: 43 EKIGAGSFGTVHRAEWHG-SDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
+V ++ G+L+ +H S R R RL +A VA+ + YLH+++
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLH---KSGAREQLDERRRLSMAYDVAKGMNYLHNRN- 157
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS----YKSPEYQSS 447
++H NLKS N+L+D V V D+G S L A + + + + +PE
Sbjct: 158 ----PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRD 213
Query: 448 KKISRKSDVWSFGCLLLELLT 468
+ + KSDV+SFG +L EL T
Sbjct: 214 EPSNEKSDVYSFGVILWELAT 234
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 124/280 (44%), Gaps = 39/280 (13%)
Query: 276 LGKGIFGNSYKALLEGRA-PVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYF 334
LG G +G Y + + + V VK L++ + EEF K+ V+ + KHPNL+ LL
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 335 SNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRT 394
+V ++ GNL + + NR L +A ++ A+EYL K+
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLR----ECNREEVTAVVLLYMATQISSAMEYLEKKN---- 150
Query: 395 QSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI-----AAQRMISYKSPEYQSSKK 449
IH +L + N L+ +N +V V+D+G S L+ A+ I + +PE +
Sbjct: 151 ---FIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNT 207
Query: 450 ISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFD-SEISV 508
S KSDVW+FG LL E+ T +S + G DL ++++D E
Sbjct: 208 FSIKSDVWAFGVLLWEIATYGMSPYP------GIDL-------------SQVYDLLEKGY 248
Query: 509 QRSAAHGM-LKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
+ G K+ ++ C SP RP AE E +
Sbjct: 249 RMEQPEGCPPKVYELMRACWKWSPADRPSFAETHQAFETM 288
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 15/201 (7%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRL--RDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
E +G G FG ++A G + V VK L +D EF +++ ++ +HPN++ +
Sbjct: 43 EKIGAGSFGTVHRAEWHG-SDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
+V ++ G+L+ +H S R R RL +A VA+ + YLH+++
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLH---KSGAREQLDERRRLSMAYDVAKGMNYLHNRN- 157
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS----YKSPEYQSS 447
++H +LKS N+L+D V V D+G S L A + + + +PE
Sbjct: 158 ----PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRD 213
Query: 448 KKISRKSDVWSFGCLLLELLT 468
+ + KSDV+SFG +L EL T
Sbjct: 214 EPSNEKSDVYSFGVILWELAT 234
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 122/276 (44%), Gaps = 37/276 (13%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
LG G FG + G V +K L+ + E F ++ ++ KH L+ L A S
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKP-GTMSPESFLEEAQIMKKLKHDKLVQLYAV-VS 74
Query: 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
+ +V ++ G+L + + G+ ++P + + +A VA + Y+ +
Sbjct: 75 EEPIYIVTEYMNKGSLLDFLKDGEGRALKLP----NLVDMAAQVAAGMAYIERMN----- 125
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-----ISYKSPEYQSSKKI 450
IH +L+S NIL+ + + ++D+G + L+ R I + +PE +
Sbjct: 126 --YIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRF 183
Query: 451 SRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
+ KSDVWSFG LL EL+T GR+ G+N ++ V R R D IS+
Sbjct: 184 TIKSDVWSFGILLTELVTKGRVPY----PGMNNREVLEQVERGYRMPCPQ---DCPISLH 236
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
++ I C K PE+RP + S LE
Sbjct: 237 -----------ELMIHCWKKDPEERPTFEYLQSFLE 261
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 21/202 (10%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFR-KQLLVIADQKHPNLLPLLAY 332
E +G+G G Y A+ V R +L+ +E ++LV+ + K+PN++ L
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 333 YFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKS 392
Y DE +V ++ G+L + + + +I CR L +ALE+LH
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-------QALEFLH----- 134
Query: 393 RTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYKSPEYQSSKKISR 452
+ VIH N+KS NILL + V ++D+GF + + P ++R +P + + + ++R
Sbjct: 135 --SNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQIT-PEQSKRSTMVGTPYWMAPEVVTR 191
Query: 453 KS-----DVWSFGCLLLELLTG 469
K+ D+WS G + +E++ G
Sbjct: 192 KAYGPKVDIWSLGIMAIEMIEG 213
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 123/275 (44%), Gaps = 36/275 (13%)
Query: 276 LGKGIFGNSYKA--LLEGRAPVVVKRLRDLKPLITEEFR----KQLLVIADQKHPNLLPL 329
+G+G F Y+A LL+G PV +K+++ L+ + R K++ ++ HPN++
Sbjct: 40 IGRGQFSEVYRAACLLDG-VPVALKKVQIFD-LMDAKARADCIKEIDLLKQLNHPNVIKY 97
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
A + ++E +V + A G+L I K K IP R + V + ALE++H +
Sbjct: 98 YASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQ--LCSALEHMHSR 155
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA-QPIAAQRMIS---YKSPEYQ 445
V+H ++K N+ + +V + D G + + AA ++ Y SPE
Sbjct: 156 -------RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERI 208
Query: 446 SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSE 505
+ KSD+WS GCLL E+ + + +N LC + + ++ + E
Sbjct: 209 HENGYNFKSDIWSLGCLLYEM--AALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEE 266
Query: 506 ISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEV 540
L Q+ C N PEKRP++ V
Sbjct: 267 -------------LRQLVNMCINPDPEKRPDVTYV 288
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 101/202 (50%), Gaps = 21/202 (10%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFR-KQLLVIADQKHPNLLPLLAY 332
E +G+G G Y A+ V R +L+ +E ++LV+ + K+PN++ L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 333 YFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKS 392
Y DE +V ++ G+L + + + +I CR L +ALE+LH
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-------QALEFLH----- 133
Query: 393 RTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYKSPEYQSSKKISR 452
+ VIH ++KS NILL + V ++D+GF + + P ++R +P + + + ++R
Sbjct: 134 --SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT-PEQSKRSTMVGTPYWMAPEVVTR 190
Query: 453 KS-----DVWSFGCLLLELLTG 469
K+ D+WS G + +E++ G
Sbjct: 191 KAYGPKVDIWSLGIMAIEMIEG 212
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 133/284 (46%), Gaps = 35/284 (12%)
Query: 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAY 332
+ +G G FG YK G V + + P + F+ ++ V+ +H N+L L
Sbjct: 18 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 76
Query: 333 YFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKS 392
Y + + +V ++ +L++ +H ++ F + +AR A+ ++YLH K
Sbjct: 77 YSTKPQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHAK--- 128
Query: 393 RTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM------ISYKSPE--- 443
++IH +LKS NI L ++ V + D+G +++ ++ + + I + +PE
Sbjct: 129 ----SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
Query: 444 YQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFD 503
Q S +SDV++FG +L EL+TG++ + IN D +++
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN----INNRDQIIFMV-------GRGYLS 233
Query: 504 SEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
++S RS +K L +C K ++RP ++++ +E++
Sbjct: 234 PDLSKVRSNCPKAMKRLMA--ECLKKKRDERPLFPQILASIELL 275
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 133/284 (46%), Gaps = 35/284 (12%)
Query: 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAY 332
+ +G G FG YK G V + + P + F+ ++ V+ +H N+L L
Sbjct: 18 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 76
Query: 333 YFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKS 392
Y + + +V ++ +L++ +H ++ F + +AR A+ ++YLH K
Sbjct: 77 YSTKPQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHAK--- 128
Query: 393 RTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM------ISYKSPE--- 443
++IH +LKS NI L ++ V + D+G +++ ++ + + I + +PE
Sbjct: 129 ----SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
Query: 444 YQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFD 503
Q S +SDV++FG +L EL+TG++ + IN D +++
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN----INNRDQIIFMV-------GRGYLS 233
Query: 504 SEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
++S RS +K L +C K ++RP ++++ +E++
Sbjct: 234 PDLSKVRSNCPKAMKRLMA--ECLKKKRDERPLFPQILASIELL 275
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 133/284 (46%), Gaps = 35/284 (12%)
Query: 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAY 332
+ +G G FG YK G V + + P + F+ ++ V+ +H N+L L
Sbjct: 13 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 71
Query: 333 YFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKS 392
Y + + +V ++ +L++ +H ++ F + +AR A+ ++YLH K
Sbjct: 72 YSTKPQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHAK--- 123
Query: 393 RTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM------ISYKSPE--- 443
++IH +LKS NI L ++ V + D+G +++ ++ + + I + +PE
Sbjct: 124 ----SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 444 YQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFD 503
Q S +SDV++FG +L EL+TG++ + IN D +++
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN----INNRDQIIFMV-------GRGYLS 228
Query: 504 SEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
++S RS +K L +C K ++RP ++++ +E++
Sbjct: 229 PDLSKVRSNCPKAMKRLMA--ECLKKKRDERPLFPQILASIELL 270
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 101/202 (50%), Gaps = 21/202 (10%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFR-KQLLVIADQKHPNLLPLLAY 332
E +G+G G Y A+ V R +L+ +E ++LV+ + K+PN++ L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 333 YFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKS 392
Y DE +V ++ G+L + + + +I CR L +ALE+LH
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-------QALEFLH----- 133
Query: 393 RTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYKSPEYQSSKKISR 452
+ VIH ++KS NILL + V ++D+GF + + P ++R +P + + + ++R
Sbjct: 134 --SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT-PEQSKRSXMVGTPYWMAPEVVTR 190
Query: 453 KS-----DVWSFGCLLLELLTG 469
K+ D+WS G + +E++ G
Sbjct: 191 KAYGPKVDIWSLGIMAIEMIEG 212
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 101/202 (50%), Gaps = 21/202 (10%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFR-KQLLVIADQKHPNLLPLLAY 332
E +G+G G Y A+ V R +L+ +E ++LV+ + K+PN++ L
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 333 YFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKS 392
Y DE +V ++ G+L + + + +I CR L +ALE+LH
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-------QALEFLH----- 134
Query: 393 RTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYKSPEYQSSKKISR 452
+ VIH ++KS NILL + V ++D+GF + + P ++R +P + + + ++R
Sbjct: 135 --SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT-PEQSKRSXMVGTPYWMAPEVVTR 191
Query: 453 KS-----DVWSFGCLLLELLTG 469
K+ D+WS G + +E++ G
Sbjct: 192 KAYGPKVDIWSLGIMAIEMIEG 213
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 133/284 (46%), Gaps = 35/284 (12%)
Query: 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAY 332
+ +G G FG YK G V + + P + F+ ++ V+ +H N+L L
Sbjct: 15 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 73
Query: 333 YFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKS 392
Y + + +V ++ +L++ +H ++ F + +AR A+ ++YLH K
Sbjct: 74 YSTKPQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHAK--- 125
Query: 393 RTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM------ISYKSPE--- 443
++IH +LKS NI L ++ V + D+G +++ ++ + + I + +PE
Sbjct: 126 ----SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 181
Query: 444 YQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFD 503
Q S +SDV++FG +L EL+TG++ + IN D +++
Sbjct: 182 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN----INNRDQIIFMV-------GRGYLS 230
Query: 504 SEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
++S RS +K L +C K ++RP ++++ +E++
Sbjct: 231 PDLSKVRSNCPKAMKRLMA--ECLKKKRDERPLFPQILASIELL 272
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 119/276 (43%), Gaps = 37/276 (13%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
LG+G FG + G V +K L+ + E F ++ V+ +H L+ L A S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VS 249
Query: 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
+ +V ++ G+L + + G R+P + +A +A + Y+ +
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVERMN----- 300
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-----ISYKSPEYQSSKKI 450
+H +L++ NIL+ +N + V+D+G + L+ R I + +PE +
Sbjct: 301 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 358
Query: 451 SRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
+ KSDVWSFG LL EL T GR+ G+ ++ V R R E +S
Sbjct: 359 TIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCPPECPES----- 409
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
L + QC K PE+RP + + LE
Sbjct: 410 ---------LHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 133/284 (46%), Gaps = 35/284 (12%)
Query: 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAY 332
+ +G G FG YK G V + + P + F+ ++ V+ +H N+L L
Sbjct: 40 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 98
Query: 333 YFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKS 392
Y + + +V ++ +L++ +H ++ F + +AR A+ ++YLH K
Sbjct: 99 YSTKPQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHAK--- 150
Query: 393 RTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM------ISYKSPE--- 443
++IH +LKS NI L ++ V + D+G +++ ++ + + I + +PE
Sbjct: 151 ----SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 206
Query: 444 YQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFD 503
Q S +SDV++FG +L EL+TG++ + IN D +++
Sbjct: 207 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN----INNRDQIIFMV-------GRGYLS 255
Query: 504 SEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
++S RS +K L +C K ++RP ++++ +E++
Sbjct: 256 PDLSKVRSNCPKAMKRLMA--ECLKKKRDERPLFPQILASIELL 297
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 119/276 (43%), Gaps = 37/276 (13%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
LG+G FG + G V +K L+ + E F ++ V+ +H L+ L A S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VS 249
Query: 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
+ +V ++ G+L + + G R+P + +A +A + Y+ +
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVERMN----- 300
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-----ISYKSPEYQSSKKI 450
+H +L++ NIL+ +N + V+D+G + L+ R I + +PE +
Sbjct: 301 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 358
Query: 451 SRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
+ KSDVWSFG LL EL T GR+ G+ ++ V R R E +S
Sbjct: 359 TIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCPPECPES----- 409
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
L + QC K PE+RP + + LE
Sbjct: 410 ---------LHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 133/284 (46%), Gaps = 35/284 (12%)
Query: 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAY 332
+ +G G FG YK G V + + P + F+ ++ V+ +H N+L L
Sbjct: 13 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 71
Query: 333 YFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKS 392
Y + + +V ++ +L++ +H ++ F + +AR A+ ++YLH K
Sbjct: 72 YSTAPQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHAK--- 123
Query: 393 RTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM------ISYKSPE--- 443
++IH +LKS NI L ++ V + D+G +++ ++ + + I + +PE
Sbjct: 124 ----SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 444 YQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFD 503
Q S +SDV++FG +L EL+TG++ + IN D +++
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN----INNRDQIIFMV-------GRGYLS 228
Query: 504 SEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
++S RS +K L +C K ++RP ++++ +E++
Sbjct: 229 PDLSKVRSNCPKAMKRLMA--ECLKKKRDERPLFPQILASIELL 270
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 133/284 (46%), Gaps = 35/284 (12%)
Query: 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAY 332
+ +G G FG YK G V + + P + F+ ++ V+ +H N+L L
Sbjct: 41 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 99
Query: 333 YFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKS 392
Y + + +V ++ +L++ +H ++ F + +AR A+ ++YLH K
Sbjct: 100 YSTKPQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHAK--- 151
Query: 393 RTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM------ISYKSPE--- 443
++IH +LKS NI L ++ V + D+G +++ ++ + + I + +PE
Sbjct: 152 ----SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 207
Query: 444 YQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFD 503
Q S +SDV++FG +L EL+TG++ + IN D +++
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN----INNRDQIIFMV-------GRGYLS 256
Query: 504 SEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
++S RS +K L +C K ++RP ++++ +E++
Sbjct: 257 PDLSKVRSNCPKAMKRLMA--ECLKKKRDERPLFPQILASIELL 298
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 116/268 (43%), Gaps = 41/268 (15%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKP--LITEEFRKQLLVIADQKHPNLLPLLAYY 333
LG+G FG + G V +K LKP + E F ++ V+ +H L+ L A
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIK---TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV- 71
Query: 334 FSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSR 393
S + +V ++ G+L + + G R+P + +A +A + Y+ +
Sbjct: 72 VSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVERMN--- 124
Query: 394 TQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-----ISYKSPEYQSSK 448
+H +L++ NIL+ +N + V+D+G + L+ R I + +PE
Sbjct: 125 ----YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYG 180
Query: 449 KISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEIS 507
+ + KSDVWSFG LL EL T GR+ G+ ++ V R R E +S
Sbjct: 181 RFTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCPPECPES--- 233
Query: 508 VQRSAAHGMLKLLQVAIQCCNKSPEKRP 535
L + QC K PE+RP
Sbjct: 234 -----------LHDLMCQCWRKEPEERP 250
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 120/278 (43%), Gaps = 41/278 (14%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLR--DLKPLITEEFRKQLLVIADQKHPNLLPLLAYY 333
LG+G FG + G V +K L+ ++ P E F ++ V+ +H L+ L A
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSP---EAFLQEAQVMKKLRHEKLVQLYAV- 248
Query: 334 FSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSR 393
S + +V ++ G+L + + G R+P + +A +A + Y+ +
Sbjct: 249 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERMN--- 301
Query: 394 TQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-----ISYKSPEYQSSK 448
+H +L++ NIL+ +N + V+D+G L+ R I + +PE
Sbjct: 302 ----YVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYG 357
Query: 449 KISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEIS 507
+ + KSDVWSFG LL EL T GR+ G+ ++ V R R E +S
Sbjct: 358 RFTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCPPECPES--- 410
Query: 508 VQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
L + QC K PE+RP + + LE
Sbjct: 411 -----------LHDLMCQCWRKDPEERPTFEYLQAFLE 437
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 101/202 (50%), Gaps = 21/202 (10%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFR-KQLLVIADQKHPNLLPLLAY 332
E +G+G G Y A+ V R +L+ +E ++LV+ + K+PN++ L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 333 YFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKS 392
Y DE +V ++ G+L + + + +I CR L +ALE+LH
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-------QALEFLH----- 133
Query: 393 RTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYKSPEYQSSKKISR 452
+ VIH ++KS NILL + V ++D+GF + + P ++R +P + + + ++R
Sbjct: 134 --SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT-PEQSKRSEMVGTPYWMAPEVVTR 190
Query: 453 KS-----DVWSFGCLLLELLTG 469
K+ D+WS G + +E++ G
Sbjct: 191 KAYGPKVDIWSLGIMAIEMIEG 212
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 119/276 (43%), Gaps = 37/276 (13%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
LG+G FG + G V +K L+ + E F ++ V+ +H L+ L A S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VS 249
Query: 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
+ +V ++ G+L + + G R+P + +A +A + Y+ +
Sbjct: 250 EEPIYIVGEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVERMN----- 300
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-----ISYKSPEYQSSKKI 450
+H +L++ NIL+ +N + V+D+G + L+ R I + +PE +
Sbjct: 301 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 358
Query: 451 SRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
+ KSDVWSFG LL EL T GR+ G+ ++ V R R E +S
Sbjct: 359 TIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCPPECPES----- 409
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
L + QC K PE+RP + + LE
Sbjct: 410 ---------LHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 18/202 (8%)
Query: 274 EGLGKGIFGNS--YKALLEGRAPVVVK-RLRDLKPLITEEFRKQLLVIADQKHPNLLPLL 330
+ +G+G FG + K+ +GR V+ + + + EE R+++ V+A+ KHPN++
Sbjct: 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYR 89
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
+ N +V + G+LF RI+ K + F+ L + AL+++H +
Sbjct: 90 ESFEENGSLYIVMDYCEGGDLFKRINAQKG----VLFQEDQILDWFVQICLALKHVHDRK 145
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI----SYKSPEYQS 446
++H ++KS NI L + V + D+G + ++ + R Y SPE
Sbjct: 146 -------ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICE 198
Query: 447 SKKISRKSDVWSFGCLLLELLT 468
+K + KSD+W+ GC+L EL T
Sbjct: 199 NKPYNNKSDIWALGCVLYELCT 220
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 115/266 (43%), Gaps = 37/266 (13%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
LG+G FG + G V +K L+ + E F ++ V+ +H L+ L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VS 83
Query: 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
+ +V ++ G+L + + G R+P + +A +A + Y+ +
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERMN----- 134
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-----ISYKSPEYQSSKKI 450
+H +L++ NIL+ +N + V+D+G + L+ R I + +PE +
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRF 192
Query: 451 SRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
+ KSDVWSFG LL EL T GR+ G+ ++ V R R E +S
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCPPECPES----- 243
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRP 535
L + QC K PE+RP
Sbjct: 244 ---------LHDLMCQCWRKDPEERP 260
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 119/276 (43%), Gaps = 37/276 (13%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
LG+G FG + G V +K L+ + E F ++ V+ +H L+ L A S
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VS 332
Query: 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
+ +V ++ G+L + + G R+P + +A +A + Y+ +
Sbjct: 333 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVERMN----- 383
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-----ISYKSPEYQSSKKI 450
+H +L++ NIL+ +N + V+D+G + L+ R I + +PE +
Sbjct: 384 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 441
Query: 451 SRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
+ KSDVWSFG LL EL T GR+ G+ ++ V R R E +S
Sbjct: 442 TIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCPPECPES----- 492
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
L + QC K PE+RP + + LE
Sbjct: 493 ---------LHDLMCQCWRKEPEERPTFEYLQAFLE 519
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 116/268 (43%), Gaps = 41/268 (15%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKP--LITEEFRKQLLVIADQKHPNLLPLLAYY 333
LG+G FG + G V +K LKP + E F ++ V+ +H L+ L A
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIK---TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV- 74
Query: 334 FSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSR 393
S + +V ++ G+L + + G R+P + +A +A + Y+ +
Sbjct: 75 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVERMN--- 127
Query: 394 TQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-----ISYKSPEYQSSK 448
+H +L++ NIL+ +N + V+D+G + L+ R I + +PE
Sbjct: 128 ----YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 183
Query: 449 KISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEIS 507
+ + KSDVWSFG LL EL T GR+ G+ ++ V R R E +S
Sbjct: 184 RFTIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCPPECPES--- 236
Query: 508 VQRSAAHGMLKLLQVAIQCCNKSPEKRP 535
L + QC K PE+RP
Sbjct: 237 -----------LHDLMCQCWRKEPEERP 253
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 119/276 (43%), Gaps = 37/276 (13%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
LG+G FG + G V +K L+ + E F ++ V+ +H L+ L A S
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VS 72
Query: 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
+ +V ++ G+L + + G R+P + +A +A + Y+ +
Sbjct: 73 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERMN----- 123
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-----ISYKSPEYQSSKKI 450
+H +L++ NIL+ +N + V+D+G + L+ R I + +PE +
Sbjct: 124 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 181
Query: 451 SRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
+ KSDVWSFG LL EL T GR+ G+ ++ V R R E +S
Sbjct: 182 TIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCPPECPES----- 232
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
L + QC K PE+RP + + LE
Sbjct: 233 ---------LHDLMCQCWRKDPEERPTFEYLQAFLE 259
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 132/284 (46%), Gaps = 35/284 (12%)
Query: 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAY 332
+ +G G FG YK G V + + P + F+ ++ V+ +H N+L L
Sbjct: 13 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 71
Query: 333 YFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKS 392
Y + + +V ++ +L++ +H ++ F + +AR A+ ++YLH K
Sbjct: 72 YSTKPQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHAK--- 123
Query: 393 RTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM------ISYKSPE--- 443
++IH +LKS NI L ++ V + D+G ++ ++ + + I + +PE
Sbjct: 124 ----SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 444 YQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFD 503
Q S +SDV++FG +L EL+TG++ + IN D +++
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN----INNRDQIIFMV-------GRGYLS 228
Query: 504 SEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
++S RS +K L +C K ++RP ++++ +E++
Sbjct: 229 PDLSKVRSNCPKAMKRLMA--ECLKKKRDERPLFPQILASIELL 270
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 119/276 (43%), Gaps = 37/276 (13%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
LG+G FG + G V +K L+ + E F ++ V+ +H L+ L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VS 83
Query: 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
+ +V ++ G+L + + G R+P + +A +A + Y+ +
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERMN----- 134
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-----ISYKSPEYQSSKKI 450
+H +L++ NIL+ +N + V+D+G + L+ R I + +PE +
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 451 SRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
+ KSDVWSFG LL EL T GR+ G+ ++ V R R E +S
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCPPECPES----- 243
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
L + QC K PE+RP + + LE
Sbjct: 244 ---------LHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 119/276 (43%), Gaps = 37/276 (13%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
LG+G FG + G V +K L+ + E F ++ V+ +H L+ L A S
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VS 74
Query: 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
+ +V ++ G+L + + G R+P + +A +A + Y+ +
Sbjct: 75 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERMN----- 125
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-----ISYKSPEYQSSKKI 450
+H +L++ NIL+ +N + V+D+G + L+ R I + +PE +
Sbjct: 126 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 183
Query: 451 SRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
+ KSDVWSFG LL EL T GR+ G+ ++ V R R E +S
Sbjct: 184 TIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCPPECPES----- 234
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
L + QC K PE+RP + + LE
Sbjct: 235 ---------LHDLMCQCWRKDPEERPTFEYLQAFLE 261
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 118/276 (42%), Gaps = 37/276 (13%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
LG+G FG + G V +K L+ + E F ++ V+ +H L+ L A S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VS 80
Query: 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
+ +V ++ G+L + + G R+P +A G+A Y+ +
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMA----YVERMN----- 131
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-----ISYKSPEYQSSKKI 450
+H +L++ NIL+ +N + V+D+G + L+ R I + +PE +
Sbjct: 132 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 189
Query: 451 SRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
+ KSDVWSFG LL EL T GR+ G+ ++ V R R E +S
Sbjct: 190 TIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCPPECPES----- 240
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
L + QC K PE+RP + + LE
Sbjct: 241 ---------LHDLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 119/276 (43%), Gaps = 37/276 (13%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
LG+G FG + G V +K L+ + E F ++ V+ +H L+ L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VS 83
Query: 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
+ +V ++ G+L + + G R+P + +A +A + Y+ +
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERMN----- 134
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-----ISYKSPEYQSSKKI 450
+H +L++ NIL+ +N + V+D+G + L+ R I + +PE +
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 451 SRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
+ KSDVWSFG LL EL T GR+ G+ ++ V R R E +S
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCPPECPES----- 243
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
L + QC K PE+RP + + LE
Sbjct: 244 ---------LHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 114/266 (42%), Gaps = 37/266 (13%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
LG+G FG + G V +K L+ + E F ++ V+ +H L+ L A S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VS 80
Query: 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
+ +V ++ G+L + + G R+P +A G+A Y+ +
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMA----YVERMN----- 131
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-----ISYKSPEYQSSKKI 450
+H +L++ NIL+ +N + V+D+G + L+ R I + +PE +
Sbjct: 132 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRF 189
Query: 451 SRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
+ KSDVWSFG LL EL T GR+ G+ ++ V R R E +S
Sbjct: 190 TIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCPPECPES----- 240
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRP 535
L + QC K PE+RP
Sbjct: 241 ---------LHDLMCQCWRKEPEERP 257
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 119/276 (43%), Gaps = 37/276 (13%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
LG+G FG + G V +K L+ + E F ++ V+ +H L+ L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VS 83
Query: 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
+ +V ++ G+L + + G R+P + +A +A + Y+ +
Sbjct: 84 EEPIYIVCEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERMN----- 134
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-----ISYKSPEYQSSKKI 450
+H +L++ NIL+ +N + V+D+G + L+ R I + +PE +
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 451 SRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
+ KSDVWSFG LL EL T GR+ G+ ++ V R R E +S
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCPPECPES----- 243
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
L + QC K PE+RP + + LE
Sbjct: 244 ---------LHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 119/276 (43%), Gaps = 37/276 (13%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
LG+G FG + G V +K L+ + E F ++ V+ +H L+ L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKIRHEKLVQLYAV-VS 83
Query: 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
+ +V ++ G+L + + G R+P + +A +A + Y+ +
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERMN----- 134
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-----ISYKSPEYQSSKKI 450
+H +L++ NIL+ +N + V+D+G + L+ R I + +PE +
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 451 SRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
+ KSDVWSFG LL EL T GR+ G+ ++ V R R E +S
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCPPECPES----- 243
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
L + QC K PE+RP + + LE
Sbjct: 244 ---------LHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 132/284 (46%), Gaps = 35/284 (12%)
Query: 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAY 332
+ +G G FG YK G V + + P + F+ ++ V+ +H N+L L
Sbjct: 33 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 91
Query: 333 YFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKS 392
Y + + +V ++ +L++ +H ++ F + +AR A+ ++YLH K
Sbjct: 92 YSTKPQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHAK--- 143
Query: 393 RTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM------ISYKSPE--- 443
++IH +LKS NI L ++ V + D+G ++ ++ + + I + +PE
Sbjct: 144 ----SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 199
Query: 444 YQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFD 503
Q S +SDV++FG +L EL+TG++ + IN D +++
Sbjct: 200 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN----INNRDQIIFMV-------GRGYLS 248
Query: 504 SEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
++S RS +K L +C K ++RP ++++ +E++
Sbjct: 249 PDLSKVRSNCPKAMKRLMA--ECLKKKRDERPLFPQILASIELL 290
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 132/284 (46%), Gaps = 35/284 (12%)
Query: 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAY 332
+ +G G FG YK G V + + P + F+ ++ V+ +H N+L L
Sbjct: 41 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMG 99
Query: 333 YFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKS 392
Y + + +V ++ +L++ +H ++ F + +AR A+ ++YLH K
Sbjct: 100 YSTKPQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHAK--- 151
Query: 393 RTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM------ISYKSPE--- 443
++IH +LKS NI L ++ V + D+G ++ ++ + + I + +PE
Sbjct: 152 ----SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 207
Query: 444 YQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFD 503
Q S +SDV++FG +L EL+TG++ + IN D +++
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN----INNRDQIIFMV-------GRGYLS 256
Query: 504 SEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
++S RS +K L +C K ++RP ++++ +E++
Sbjct: 257 PDLSKVRSNCPKAMKRLMA--ECLKKKRDERPLFPQILASIELL 298
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 118/276 (42%), Gaps = 37/276 (13%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
LG+G FG + G V +K L+ + E F ++ V+ +H L+ L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VS 83
Query: 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
+ +V ++ G L + + G R+P + +A +A + Y+ +
Sbjct: 84 EEPIYIVMEYMSKGCLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERMN----- 134
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-----ISYKSPEYQSSKKI 450
+H +L++ NIL+ +N + V+D+G + L+ R I + +PE +
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 451 SRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
+ KSDVWSFG LL EL T GR+ G+ ++ V R R E +S
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCPPECPES----- 243
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
L + QC K PE+RP + + LE
Sbjct: 244 ---------LHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 135/307 (43%), Gaps = 63/307 (20%)
Query: 274 EGLGKGIFGNSYKALL---EGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNL 326
E +G+G FG Y L +G+ A + R+ D+ + +F + +++ D HPN+
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV--SQFLTEGIIMKDFSHPNV 91
Query: 327 LPLLAYYF-SNDEKLLVYKFAGNGNLFNRIHG---GKSSKNRIPFRCRSRLLVARGVARA 382
L LL S L+V + +G+L N I + K+ I F + VA+
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ--------VAKG 143
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSS--------LVAQPIAAQ 434
++YL K +H +L + N +LD+ V V+D+G + V A+
Sbjct: 144 MKYLASK-------KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 196
Query: 435 RMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP--QGINGADLCSWVL-- 490
+ + + E ++K + KSDVWSFG LL EL+ T AP +N D+ ++L
Sbjct: 197 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQG 251
Query: 491 -RAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKV 549
R ++ E+ + L +V ++C + E RP +E+VS + I
Sbjct: 252 RRLLQPEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 294
Query: 550 TESTEEE 556
T E E
Sbjct: 295 TFIGEHE 301
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 118/276 (42%), Gaps = 37/276 (13%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
LG+G FG + G V +K L+ + E F ++ V+ +H L+ L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VS 83
Query: 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
+ +V ++ G L + + G R+P + +A +A + Y+ +
Sbjct: 84 EEPIYIVTEYMSKGCLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERMN----- 134
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-----ISYKSPEYQSSKKI 450
+H +L++ NIL+ +N + V+D+G + L+ R I + +PE +
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 451 SRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
+ KSDVWSFG LL EL T GR+ G+ ++ V R R E +S
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCPPECPES----- 243
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
L + QC K PE+RP + + LE
Sbjct: 244 ---------LHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 114/266 (42%), Gaps = 37/266 (13%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
LG+G FG + G V +K L+ + E F ++ V+ +H L+ L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VS 83
Query: 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
+ +V ++ G+L + + G R+P + +A +A + Y+ +
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERMN----- 134
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-----ISYKSPEYQSSKKI 450
+H +L + NIL+ +N + V+D+G + L+ R I + +PE +
Sbjct: 135 --YVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 451 SRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509
+ KSDVWSFG LL EL T GR+ G+ ++ V R R E +S
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPY----PGMVNREVLDQVERGYRMPCPPECPES----- 243
Query: 510 RSAAHGMLKLLQVAIQCCNKSPEKRP 535
L + QC K PE+RP
Sbjct: 244 ---------LHDLMCQCWRKDPEERP 260
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 135/309 (43%), Gaps = 55/309 (17%)
Query: 263 FKLNDLLKAPAEGLGKGIFGNSYKALLEGRAPVVV-KRLRDLKPLITEEFRKQLLVIADQ 321
F+ +DL+ E LGKG FG + K V+V K L F K++ V+
Sbjct: 7 FRPSDLIHG--EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCL 64
Query: 322 KHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVAR 381
+HPN+L + + + + ++ G L I KS ++ P+ R+ A+ +A
Sbjct: 65 EHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGII---KSMDSQYPWS--QRVSFAKDIAS 119
Query: 382 ALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV----AQPIAAQRMI 437
+ YLH + +IH +L S N L+ +N+ V+V+D+G + L+ QP + +
Sbjct: 120 GMAYLHSMN-------IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLK 172
Query: 438 S--------------YKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHS--APQGIN 481
+ +PE + + K DV+SFG +L E++ GR++ P+ ++
Sbjct: 173 KPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNADPDYLPRTMD 231
Query: 482 -GADLCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEV 540
G ++ ++ R F + ++CC+ PEKRP ++
Sbjct: 232 FGLNVRGFLDRYCPPNCPPSFF------------------PITVRCCDLDPEKRPSFVKL 273
Query: 541 VSELEIIKV 549
LE +++
Sbjct: 274 EHWLETLRM 282
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 132/298 (44%), Gaps = 63/298 (21%)
Query: 274 EGLGKGIFGNSYKALL---EGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNL 326
E +G+G FG Y L +G+ A + R+ D+ + +F + +++ D HPN+
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV--SQFLTEGIIMKDFSHPNV 111
Query: 327 LPLLAYYF-SNDEKLLVYKFAGNGNLFNRIHG---GKSSKNRIPFRCRSRLLVARGVARA 382
L LL S L+V + +G+L N I + K+ I F + VA+
Sbjct: 112 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ--------VAKG 163
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSS--------LVAQPIAAQ 434
++YL K +H +L + N +LD+ V V+D+G + V A+
Sbjct: 164 MKYLASK-------KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 216
Query: 435 RMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP--QGINGADLCSWVL-- 490
+ + + E ++K + KSDVWSFG LL EL+ T AP +N D+ ++L
Sbjct: 217 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQG 271
Query: 491 -RAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
R ++ E+ + L +V ++C + E RP +E+VS + I
Sbjct: 272 RRLLQPEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAI 312
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 138/326 (42%), Gaps = 64/326 (19%)
Query: 244 VVAGEDRNLVFIEDEQPAGFKLNDLLKAPAEGLGKGIFGNSYKALLEGRAPVVVKRLRDL 303
+V ++++ +FI+ GF DL+ EGL G F +KR+
Sbjct: 23 MVIIDNKHYLFIQKLGEGGFSYVDLV----EGLHDGHF-------------YALKRILCH 65
Query: 304 KPLITEEFRKQLLVIADQKHPNLLPLLAYYF----SNDEKLLVYKFAGNGNLFNRIHGGK 359
+ EE +++ + HPN+L L+AY + E L+ F G L+N I K
Sbjct: 66 EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLK 125
Query: 360 SSKNRIPFRCRSRLL-VARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLV 418
N F ++L + G+ R LE +H K + H +LK TNILL D ++
Sbjct: 126 DKGN---FLTEDQILWLLLGICRGLEAIHAKGYA-------HRDLKPTNILLGDEGQPVL 175
Query: 419 SDYGF------------SSLVAQPIAAQR-MISYKSPEY---QSSKKISRKSDVWSFGCL 462
D G +L Q AAQR ISY++PE QS I ++DVWS GC+
Sbjct: 176 MDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCV 235
Query: 463 LLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQV 522
L ++ G Q + + A +++S+ +S H L Q+
Sbjct: 236 LYAMMFGEGPYDMVFQ---------------KGDSVALAVQNQLSIPQSPRHSS-ALWQL 279
Query: 523 AIQCCNKSPEKRPEMAEVVSELEIIK 548
P +RP + ++S+LE ++
Sbjct: 280 LNSMMTVDPHQRPHIPLLLSQLEALQ 305
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 132/298 (44%), Gaps = 63/298 (21%)
Query: 274 EGLGKGIFGNSYKALL---EGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNL 326
E +G+G FG Y L +G+ A + R+ D+ + +F + +++ D HPN+
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV--SQFLTEGIIMKDFSHPNV 112
Query: 327 LPLLAYYF-SNDEKLLVYKFAGNGNLFNRIHG---GKSSKNRIPFRCRSRLLVARGVARA 382
L LL S L+V + +G+L N I + K+ I F + VA+
Sbjct: 113 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ--------VAKG 164
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSS--------LVAQPIAAQ 434
++YL K +H +L + N +LD+ V V+D+G + V A+
Sbjct: 165 MKYLASKK-------FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 217
Query: 435 RMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP--QGINGADLCSWVL-- 490
+ + + E ++K + KSDVWSFG LL EL+ T AP +N D+ ++L
Sbjct: 218 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQG 272
Query: 491 -RAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
R ++ E+ + L +V ++C + E RP +E+VS + I
Sbjct: 273 RRLLQPEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAI 313
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 132/298 (44%), Gaps = 63/298 (21%)
Query: 274 EGLGKGIFGNSYKALL---EGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNL 326
E +G+G FG Y L +G+ A + R+ D+ + +F + +++ D HPN+
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV--SQFLTEGIIMKDFSHPNV 92
Query: 327 LPLLAYYF-SNDEKLLVYKFAGNGNLFNRIHG---GKSSKNRIPFRCRSRLLVARGVARA 382
L LL S L+V + +G+L N I + K+ I F + VA+
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ--------VAKG 144
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS--------SLVAQPIAAQ 434
++YL K +H +L + N +LD+ V V+D+G + V A+
Sbjct: 145 MKYLASK-------KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAK 197
Query: 435 RMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP--QGINGADLCSWVL-- 490
+ + + E ++K + KSDVWSFG LL EL+ T AP +N D+ ++L
Sbjct: 198 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQG 252
Query: 491 -RAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
R ++ E+ + L +V ++C + E RP +E+VS + I
Sbjct: 253 RRLLQPEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 132/298 (44%), Gaps = 63/298 (21%)
Query: 274 EGLGKGIFGNSYKALL---EGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNL 326
E +G+G FG Y L +G+ A + R+ D+ + +F + +++ D HPN+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV--SQFLTEGIIMKDFSHPNV 93
Query: 327 LPLLAYYF-SNDEKLLVYKFAGNGNLFNRIHG---GKSSKNRIPFRCRSRLLVARGVARA 382
L LL S L+V + +G+L N I + K+ I F + VA+
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ--------VAKG 145
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSS--------LVAQPIAAQ 434
++YL K +H +L + N +LD+ V V+D+G + V A+
Sbjct: 146 MKYLASK-------KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 198
Query: 435 RMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP--QGINGADLCSWVL-- 490
+ + + E ++K + KSDVWSFG LL EL+ T AP +N D+ ++L
Sbjct: 199 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQG 253
Query: 491 -RAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
R ++ E+ + L +V ++C + E RP +E+VS + I
Sbjct: 254 RRLLQPEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 132/298 (44%), Gaps = 63/298 (21%)
Query: 274 EGLGKGIFGNSYKALL---EGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNL 326
E +G+G FG Y L +G+ A + R+ D+ + +F + +++ D HPN+
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV--SQFLTEGIIMKDFSHPNV 92
Query: 327 LPLLAYYF-SNDEKLLVYKFAGNGNLFNRIHG---GKSSKNRIPFRCRSRLLVARGVARA 382
L LL S L+V + +G+L N I + K+ I F + VA+
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ--------VAKG 144
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSS--------LVAQPIAAQ 434
++YL K +H +L + N +LD+ V V+D+G + V A+
Sbjct: 145 MKYLASK-------KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 197
Query: 435 RMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP--QGINGADLCSWVL-- 490
+ + + E ++K + KSDVWSFG LL EL+ T AP +N D+ ++L
Sbjct: 198 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQG 252
Query: 491 -RAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
R ++ E+ + L +V ++C + E RP +E+VS + I
Sbjct: 253 RRLLQPEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 132/298 (44%), Gaps = 63/298 (21%)
Query: 274 EGLGKGIFGNSYKALL---EGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNL 326
E +G+G FG Y L +G+ A + R+ D+ + +F + +++ D HPN+
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV--SQFLTEGIIMKDFSHPNV 90
Query: 327 LPLLAYYF-SNDEKLLVYKFAGNGNLFNRIHG---GKSSKNRIPFRCRSRLLVARGVARA 382
L LL S L+V + +G+L N I + K+ I F + VA+
Sbjct: 91 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ--------VAKG 142
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSS--------LVAQPIAAQ 434
++YL K +H +L + N +LD+ V V+D+G + V A+
Sbjct: 143 MKYLASK-------KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 195
Query: 435 RMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP--QGINGADLCSWVL-- 490
+ + + E ++K + KSDVWSFG LL EL+ T AP +N D+ ++L
Sbjct: 196 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQG 250
Query: 491 -RAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
R ++ E+ + L +V ++C + E RP +E+VS + I
Sbjct: 251 RRLLQPEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAI 291
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 132/298 (44%), Gaps = 63/298 (21%)
Query: 274 EGLGKGIFGNSYKALL---EGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNL 326
E +G+G FG Y L +G+ A + R+ D+ + +F + +++ D HPN+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV--SQFLTEGIIMKDFSHPNV 93
Query: 327 LPLLAYYF-SNDEKLLVYKFAGNGNLFNRIHG---GKSSKNRIPFRCRSRLLVARGVARA 382
L LL S L+V + +G+L N I + K+ I F + VA+
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ--------VAKG 145
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSS--------LVAQPIAAQ 434
++YL K +H +L + N +LD+ V V+D+G + V A+
Sbjct: 146 MKYLASK-------KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 198
Query: 435 RMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP--QGINGADLCSWVL-- 490
+ + + E ++K + KSDVWSFG LL EL+ T AP +N D+ ++L
Sbjct: 199 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQG 253
Query: 491 -RAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
R ++ E+ + L +V ++C + E RP +E+VS + I
Sbjct: 254 RRLLQPEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 132/298 (44%), Gaps = 63/298 (21%)
Query: 274 EGLGKGIFGNSYKALL---EGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNL 326
E +G+G FG Y L +G+ A + R+ D+ + +F + +++ D HPN+
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV--SQFLTEGIIMKDFSHPNV 85
Query: 327 LPLLAYYF-SNDEKLLVYKFAGNGNLFNRIHG---GKSSKNRIPFRCRSRLLVARGVARA 382
L LL S L+V + +G+L N I + K+ I F + VA+
Sbjct: 86 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ--------VAKG 137
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSS--------LVAQPIAAQ 434
++YL K +H +L + N +LD+ V V+D+G + V A+
Sbjct: 138 MKYLASKK-------FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 190
Query: 435 RMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP--QGINGADLCSWVL-- 490
+ + + E ++K + KSDVWSFG LL EL+ T AP +N D+ ++L
Sbjct: 191 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQG 245
Query: 491 -RAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
R ++ E+ + L +V ++C + E RP +E+VS + I
Sbjct: 246 RRLLQPEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAI 286
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 132/298 (44%), Gaps = 63/298 (21%)
Query: 274 EGLGKGIFGNSYKALL---EGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNL 326
E +G+G FG Y L +G+ A + R+ D+ + +F + +++ D HPN+
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV--SQFLTEGIIMKDFSHPNV 88
Query: 327 LPLLAYYF-SNDEKLLVYKFAGNGNLFNRIHG---GKSSKNRIPFRCRSRLLVARGVARA 382
L LL S L+V + +G+L N I + K+ I F + VA+
Sbjct: 89 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ--------VAKG 140
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSS--------LVAQPIAAQ 434
++YL K +H +L + N +LD+ V V+D+G + V A+
Sbjct: 141 MKYLASK-------KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK 193
Query: 435 RMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP--QGINGADLCSWVL-- 490
+ + + E ++K + KSDVWSFG LL EL+ T AP +N D+ ++L
Sbjct: 194 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQG 248
Query: 491 -RAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
R ++ E+ + L +V ++C + E RP +E+VS + I
Sbjct: 249 RRLLQPEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAI 289
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 134/307 (43%), Gaps = 61/307 (19%)
Query: 276 LGKGIFGNSYKALLE---GRAPVVVKRLRDLKPLITEEFRKQLL----VIADQKHPNLLP 328
+G G FG YK +L+ G+ V V ++ LK TE+ R L ++ H N++
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVA-IKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIR 110
Query: 329 LLAYYFSNDEKLLVYKFAGNGNL--FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYL 386
L +++ ++ NG L F R G+ F + + RG+A ++YL
Sbjct: 111 LEGVISKYKPMMIITEYMENGALDKFLREKDGE-------FSVLQLVGMLRGIAAGMKYL 163
Query: 387 HHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-------ISY 439
+ + +H +L + NIL++ N + VSD+G S ++ A I +
Sbjct: 164 ANMN-------YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRW 216
Query: 440 KSPEYQSSKKISRKSDVWSFGCLLLELLT------GRISTHSAPQGINGADLCSWVLRAV 493
+PE S +K + SDVWSFG ++ E++T +S H + IN
Sbjct: 217 TAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG---------- 266
Query: 494 REEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE-IIKVTES 552
F + +A + Q+ +QC + +RP+ A++VS L+ +I+ +S
Sbjct: 267 --------FRLPTPMDCPSA-----IYQLMMQCWQQERARRPKFADIVSILDKLIRAPDS 313
Query: 553 TEEEEDF 559
+ DF
Sbjct: 314 LKTLADF 320
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 132/298 (44%), Gaps = 63/298 (21%)
Query: 274 EGLGKGIFGNSYKALL---EGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNL 326
E +G+G FG Y L +G+ A + R+ D+ + +F + +++ D HPN+
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV--SQFLTEGIIMKDFSHPNV 152
Query: 327 LPLLAYYF-SNDEKLLVYKFAGNGNLFNRIHG---GKSSKNRIPFRCRSRLLVARGVARA 382
L LL S L+V + +G+L N I + K+ I F + VA+
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ--------VAKG 204
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS--------SLVAQPIAAQ 434
+++L K +H +L + N +LD+ V V+D+G + V A+
Sbjct: 205 MKFLASKK-------FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 257
Query: 435 RMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP--QGINGADLCSWVL-- 490
+ + + E ++K + KSDVWSFG LL EL+ T AP +N D+ ++L
Sbjct: 258 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQG 312
Query: 491 -RAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
R ++ E+ + L +V ++C + E RP +E+VS + I
Sbjct: 313 RRLLQPEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAI 353
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 132/298 (44%), Gaps = 63/298 (21%)
Query: 274 EGLGKGIFGNSYKALL---EGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNL 326
E +G+G FG Y L +G+ A + R+ D+ + +F + +++ D HPN+
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV--SQFLTEGIIMKDFSHPNV 94
Query: 327 LPLLAYYF-SNDEKLLVYKFAGNGNLFNRIHG---GKSSKNRIPFRCRSRLLVARGVARA 382
L LL S L+V + +G+L N I + K+ I F + VA+
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ--------VAKG 146
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS--------SLVAQPIAAQ 434
+++L K +H +L + N +LD+ V V+D+G + V A+
Sbjct: 147 MKFLASK-------KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 199
Query: 435 RMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP--QGINGADLCSWVL-- 490
+ + + E ++K + KSDVWSFG LL EL+ T AP +N D+ ++L
Sbjct: 200 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQG 254
Query: 491 -RAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
R ++ E+ + L +V ++C + E RP +E+VS + I
Sbjct: 255 RRLLQPEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 132/298 (44%), Gaps = 63/298 (21%)
Query: 274 EGLGKGIFGNSYKALL---EGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNL 326
E +G+G FG Y L +G+ A + R+ D+ + +F + +++ D HPN+
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV--SQFLTEGIIMKDFSHPNV 98
Query: 327 LPLLAYYF-SNDEKLLVYKFAGNGNLFNRIHG---GKSSKNRIPFRCRSRLLVARGVARA 382
L LL S L+V + +G+L N I + K+ I F + VA+
Sbjct: 99 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ--------VAKG 150
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS--------SLVAQPIAAQ 434
+++L K +H +L + N +LD+ V V+D+G + V A+
Sbjct: 151 MKFLASK-------KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 203
Query: 435 RMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP--QGINGADLCSWVL-- 490
+ + + E ++K + KSDVWSFG LL EL+ T AP +N D+ ++L
Sbjct: 204 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQG 258
Query: 491 -RAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
R ++ E+ + L +V ++C + E RP +E+VS + I
Sbjct: 259 RRLLQPEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAI 299
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 132/298 (44%), Gaps = 63/298 (21%)
Query: 274 EGLGKGIFGNSYKALL---EGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNL 326
E +G+G FG Y L +G+ A + R+ D+ + +F + +++ D HPN+
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV--SQFLTEGIIMKDFSHPNV 91
Query: 327 LPLLAYYF-SNDEKLLVYKFAGNGNLFNRIHG---GKSSKNRIPFRCRSRLLVARGVARA 382
L LL S L+V + +G+L N I + K+ I F + VA+
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ--------VAKG 143
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS--------SLVAQPIAAQ 434
+++L K +H +L + N +LD+ V V+D+G + V A+
Sbjct: 144 MKFLASK-------KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 196
Query: 435 RMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP--QGINGADLCSWVL-- 490
+ + + E ++K + KSDVWSFG LL EL+ T AP +N D+ ++L
Sbjct: 197 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQG 251
Query: 491 -RAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
R ++ E+ + L +V ++C + E RP +E+VS + I
Sbjct: 252 RRLLQPEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 132/298 (44%), Gaps = 63/298 (21%)
Query: 274 EGLGKGIFGNSYKALL---EGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNL 326
E +G+G FG Y L +G+ A + R+ D+ + +F + +++ D HPN+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV--SQFLTEGIIMKDFSHPNV 93
Query: 327 LPLLAYYF-SNDEKLLVYKFAGNGNLFNRIHG---GKSSKNRIPFRCRSRLLVARGVARA 382
L LL S L+V + +G+L N I + K+ I F + VA+
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ--------VAKG 145
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS--------SLVAQPIAAQ 434
+++L K +H +L + N +LD+ V V+D+G + V A+
Sbjct: 146 MKFLASK-------KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 198
Query: 435 RMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP--QGINGADLCSWVL-- 490
+ + + E ++K + KSDVWSFG LL EL+ T AP +N D+ ++L
Sbjct: 199 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQG 253
Query: 491 -RAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
R ++ E+ + L +V ++C + E RP +E+VS + I
Sbjct: 254 RRLLQPEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 132/298 (44%), Gaps = 63/298 (21%)
Query: 274 EGLGKGIFGNSYKALL---EGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNL 326
E +G+G FG Y L +G+ A + R+ D+ + +F + +++ D HPN+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV--SQFLTEGIIMKDFSHPNV 93
Query: 327 LPLLAYYF-SNDEKLLVYKFAGNGNLFNRIHG---GKSSKNRIPFRCRSRLLVARGVARA 382
L LL S L+V + +G+L N I + K+ I F + VA+
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ--------VAKG 145
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS--------SLVAQPIAAQ 434
+++L K +H +L + N +LD+ V V+D+G + V A+
Sbjct: 146 MKFLASKK-------FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 198
Query: 435 RMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP--QGINGADLCSWVL-- 490
+ + + E ++K + KSDVWSFG LL EL+ T AP +N D+ ++L
Sbjct: 199 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQG 253
Query: 491 -RAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
R ++ E+ + L +V ++C + E RP +E+VS + I
Sbjct: 254 RRLLQPEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 132/298 (44%), Gaps = 63/298 (21%)
Query: 274 EGLGKGIFGNSYKALL---EGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNL 326
E +G+G FG Y L +G+ A + R+ D+ + +F + +++ D HPN+
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV--SQFLTEGIIMKDFSHPNV 94
Query: 327 LPLLAYYF-SNDEKLLVYKFAGNGNLFNRIHG---GKSSKNRIPFRCRSRLLVARGVARA 382
L LL S L+V + +G+L N I + K+ I F + VA+
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQ--------VAKG 146
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS--------SLVAQPIAAQ 434
+++L K +H +L + N +LD+ V V+D+G + V A+
Sbjct: 147 MKFLASK-------KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAK 199
Query: 435 RMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP--QGINGADLCSWVL-- 490
+ + + E ++K + KSDVWSFG LL EL+ T AP +N D+ ++L
Sbjct: 200 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQG 254
Query: 491 -RAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
R ++ E+ + L +V ++C + E RP +E+VS + I
Sbjct: 255 RRLLQPEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 19/202 (9%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
+G G FG + + V +K +R+ + E+F ++ V+ HP L+ L
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
LV++F +G L + + R F + L + V + YL +
Sbjct: 74 QAPICLVFEFMEHGCLSDYLR-----TQRGLFAAETLLGMCLDVCEGMAYLE-------E 121
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV-----AQPIAAQRMISYKSPEYQSSKKI 450
++VIH +L + N L+ +N+++ VSD+G + V + + + SPE S +
Sbjct: 122 ASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY 181
Query: 451 SRKSDVWSFGCLLLELLT-GRI 471
S KSDVWSFG L+ E+ + G+I
Sbjct: 182 SSKSDVWSFGVLMWEVFSEGKI 203
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 19/202 (9%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
+G G FG + + V +K +R+ + E+F ++ V+ HP L+ L
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
LV++F +G L + + R F + L + V + YL +
Sbjct: 72 QAPICLVFEFMEHGCLSDYLR-----TQRGLFAAETLLGMCLDVCEGMAYLE-------E 119
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV-----AQPIAAQRMISYKSPEYQSSKKI 450
+ VIH +L + N L+ +N+++ VSD+G + V + + + SPE S +
Sbjct: 120 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY 179
Query: 451 SRKSDVWSFGCLLLELLT-GRI 471
S KSDVWSFG L+ E+ + G+I
Sbjct: 180 SSKSDVWSFGVLMWEVFSEGKI 201
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 19/202 (9%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
+G G FG + + V +K +R+ + E+F ++ V+ HP L+ L
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
LV++F +G L + + R F + L + V + YL +
Sbjct: 74 QAPICLVFEFMEHGCLSDYLR-----TQRGLFAAETLLGMCLDVCEGMAYLE-------E 121
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV-----AQPIAAQRMISYKSPEYQSSKKI 450
+ VIH +L + N L+ +N+++ VSD+G + V + + + SPE S +
Sbjct: 122 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY 181
Query: 451 SRKSDVWSFGCLLLELLT-GRI 471
S KSDVWSFG L+ E+ + G+I
Sbjct: 182 SSKSDVWSFGVLMWEVFSEGKI 203
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 19/202 (9%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
+G G FG + + V +K +R+ + E+F ++ V+ HP L+ L
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
LV++F +G L + + R F + L + V + YL +
Sbjct: 77 QAPICLVFEFMEHGCLSDYLR-----TQRGLFAAETLLGMCLDVCEGMAYLE-------E 124
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV-----AQPIAAQRMISYKSPEYQSSKKI 450
+ VIH +L + N L+ +N+++ VSD+G + V + + + SPE S +
Sbjct: 125 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY 184
Query: 451 SRKSDVWSFGCLLLELLT-GRI 471
S KSDVWSFG L+ E+ + G+I
Sbjct: 185 SSKSDVWSFGVLMWEVFSEGKI 206
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 91/198 (45%), Gaps = 18/198 (9%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
LG G FG G+ V +K +++ + +EF ++ V+ + H L+ L
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
++ ++ NG L N + + R F+ + L + + V A+EYL K
Sbjct: 91 QRPIFIITEYMANGCLLNYLR-----EMRHRFQTQQLLEMCKDVCEAMEYLESKQ----- 140
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV-----AQPIAAQRMISYKSPEYQSSKKI 450
+H +L + N L++D +V VSD+G S V + ++ + + PE K
Sbjct: 141 --FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKF 198
Query: 451 SRKSDVWSFGCLLLELLT 468
S KSD+W+FG L+ E+ +
Sbjct: 199 SSKSDIWAFGVLMWEIYS 216
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 91/198 (45%), Gaps = 18/198 (9%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
LG G FG G+ V +K +++ + +EF ++ V+ + H L+ L
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
++ ++ NG L N + + R F+ + L + + V A+EYL K
Sbjct: 91 QRPIFIITEYMANGCLLNYLR-----EMRHRFQTQQLLEMCKDVCEAMEYLESKQ----- 140
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV-----AQPIAAQRMISYKSPEYQSSKKI 450
+H +L + N L++D +V VSD+G S V + ++ + + PE K
Sbjct: 141 --FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF 198
Query: 451 SRKSDVWSFGCLLLELLT 468
S KSD+W+FG L+ E+ +
Sbjct: 199 SSKSDIWAFGVLMWEIYS 216
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 91/198 (45%), Gaps = 18/198 (9%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
LG G FG G+ V +K +++ + +EF ++ V+ + H L+ L
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
++ ++ NG L N + + R F+ + L + + V A+EYL K
Sbjct: 75 QRPIFIITEYMANGCLLNYLR-----EMRHRFQTQQLLEMCKDVCEAMEYLESKQ----- 124
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV-----AQPIAAQRMISYKSPEYQSSKKI 450
+H +L + N L++D +V VSD+G S V + ++ + + PE K
Sbjct: 125 --FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF 182
Query: 451 SRKSDVWSFGCLLLELLT 468
S KSD+W+FG L+ E+ +
Sbjct: 183 SSKSDIWAFGVLMWEIYS 200
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 91/198 (45%), Gaps = 18/198 (9%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
LG G FG G+ V +K +++ + +EF ++ V+ + H L+ L
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
++ ++ NG L N + + R F+ + L + + V A+EYL K
Sbjct: 82 QRPIFIITEYMANGCLLNYLR-----EMRHRFQTQQLLEMCKDVCEAMEYLESKQ----- 131
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV-----AQPIAAQRMISYKSPEYQSSKKI 450
+H +L + N L++D +V VSD+G S V + ++ + + PE K
Sbjct: 132 --FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF 189
Query: 451 SRKSDVWSFGCLLLELLT 468
S KSD+W+FG L+ E+ +
Sbjct: 190 SSKSDIWAFGVLMWEIYS 207
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 91/198 (45%), Gaps = 18/198 (9%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
LG G FG G+ V +K +++ + +EF ++ V+ + H L+ L
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
++ ++ NG L N + + R F+ + L + + V A+EYL K
Sbjct: 76 QRPIFIITEYMANGCLLNYLR-----EMRHRFQTQQLLEMCKDVCEAMEYLESKQ----- 125
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV-----AQPIAAQRMISYKSPEYQSSKKI 450
+H +L + N L++D +V VSD+G S V + ++ + + PE K
Sbjct: 126 --FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF 183
Query: 451 SRKSDVWSFGCLLLELLT 468
S KSD+W+FG L+ E+ +
Sbjct: 184 SSKSDIWAFGVLMWEIYS 201
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 94/180 (52%), Gaps = 20/180 (11%)
Query: 295 VVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNR 354
V VK++ K E +++++ D H N++ + + Y DE +V +F G L +
Sbjct: 73 VAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDI 132
Query: 355 IHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNE 414
+ + ++ +I C S V RAL YLH++ VIH ++KS +ILL +
Sbjct: 133 VTHTRMNEEQIATVCLS-------VLRALSYLHNQ-------GVIHRDIKSDSILLTSDG 178
Query: 415 MVLVSDYGFSSLVAQPIAAQRMISYKSPEYQSSKKISR-----KSDVWSFGCLLLELLTG 469
+ +SD+GF + V++ + ++ + +P + + + ISR + D+WS G +++E++ G
Sbjct: 179 RIKLSDFGFCAQVSKEVPKRKXL-VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDG 237
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 19/202 (9%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
+G G FG + + V +K +R+ + E+F ++ V+ HP L+ L
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
LV +F +G L + + R F + L + V + YL +
Sbjct: 75 QAPICLVTEFMEHGCLSDYLR-----TQRGLFAAETLLGMCLDVCEGMAYLE-------E 122
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV-----AQPIAAQRMISYKSPEYQSSKKI 450
+ VIH +L + N L+ +N+++ VSD+G + V + + + SPE S +
Sbjct: 123 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY 182
Query: 451 SRKSDVWSFGCLLLELLT-GRI 471
S KSDVWSFG L+ E+ + G+I
Sbjct: 183 SSKSDVWSFGVLMWEVFSEGKI 204
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 91/198 (45%), Gaps = 18/198 (9%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
LG G FG G+ V +K +++ + +EF ++ V+ + H L+ L
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
++ ++ NG L N + + R F+ + L + + V A+EYL K
Sbjct: 71 QRPIFIITEYMANGCLLNYLR-----EMRHRFQTQQLLEMCKDVCEAMEYLESKQ----- 120
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV-----AQPIAAQRMISYKSPEYQSSKKI 450
+H +L + N L++D +V VSD+G S V + ++ + + PE K
Sbjct: 121 --FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF 178
Query: 451 SRKSDVWSFGCLLLELLT 468
S KSD+W+FG L+ E+ +
Sbjct: 179 SSKSDIWAFGVLMWEIYS 196
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 97/222 (43%), Gaps = 29/222 (13%)
Query: 258 EQPAGFKLNDLLKAPAEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPL----ITEEFRK 313
E+ FK+ +LL GKG F Y+A V ++ D K + + + +
Sbjct: 8 EKIEDFKVGNLL-------GKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQN 60
Query: 314 QLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRI-PFRCRSR 372
++ + KHP++L L Y+ ++ LV + NG + + KNR+ PF
Sbjct: 61 EVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEM------NRYLKNRVKPFSENEA 114
Query: 373 LLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIA 432
+ + YLH ++H +L +N+LL N + ++D+G ++ + P
Sbjct: 115 RHFMHQIITGMLYLH-------SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE 167
Query: 433 AQRMI----SYKSPEYQSSKKISRKSDVWSFGCLLLELLTGR 470
+ +Y SPE + +SDVWS GC+ LL GR
Sbjct: 168 KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGR 209
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 19/202 (9%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
+G G FG + + V +K +++ + ++F ++ V+ HP L+ L
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKE-GSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
LV++F +G L + + R F + L + V + YL +
Sbjct: 94 QAPICLVFEFMEHGCLSDYLR-----TQRGLFAAETLLGMCLDVCEGMAYLE-------E 141
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV-----AQPIAAQRMISYKSPEYQSSKKI 450
+ VIH +L + N L+ +N+++ VSD+G + V + + + SPE S +
Sbjct: 142 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY 201
Query: 451 SRKSDVWSFGCLLLELLT-GRI 471
S KSDVWSFG L+ E+ + G+I
Sbjct: 202 SSKSDVWSFGVLMWEVFSEGKI 223
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 117/273 (42%), Gaps = 48/273 (17%)
Query: 294 PVVVKRLRDLKPLITEEFRKQLL----VIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNG 349
PV +K LK TE R+ L ++ HPN++ L ++V ++ NG
Sbjct: 79 PVAIK---ALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENG 135
Query: 350 NL--FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTN 407
+L F R H G+ F + + RGV + YL + +H +L + N
Sbjct: 136 SLDTFLRTHDGQ-------FTIMQLVGMLRGVGAGMRYL-------SDLGYVHRDLAARN 181
Query: 408 ILLDDNEMVLVSDYGFSSLVAQ-PIAAQRM------ISYKSPEYQSSKKISRKSDVWSFG 460
+L+D N + VSD+G S ++ P AA I + +PE + + S SDVWSFG
Sbjct: 182 VLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFG 241
Query: 461 CLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLL 520
++ E+L + D+ S V R + H + +L+
Sbjct: 242 VVMWEVLA---YGERPYWNMTNRDVISSVEEGYR-----------LPAPMGCPHALHQLM 287
Query: 521 QVAIQCCNKSPEKRPEMAEVVSELE-IIKVTES 552
+ C +K +RP +++VS L+ +I+ ES
Sbjct: 288 ---LDCWHKDRAQRPRFSQIVSVLDALIRSPES 317
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 136/315 (43%), Gaps = 37/315 (11%)
Query: 254 FIEDEQPAG-FKLNDLLKAPAEGLGKGIFGNSYKALLEGRAPVVVKRL--RDLKPLITEE 310
F+ +Q G K +D K G G G G +K + V+ ++L ++KP I +
Sbjct: 12 FLTQKQKVGELKDDDFEKISELGAGNG--GVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ 69
Query: 311 FRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCR 370
++L V+ + P ++ ++S+ E + + G+L + RIP +
Sbjct: 70 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQIL 125
Query: 371 SRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP 430
++ +A V + L YL K K ++H ++K +NIL++ + + D+G S +
Sbjct: 126 GKVSIA--VIKGLTYLREKHK------IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 177
Query: 431 IAAQRM--ISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSW 488
+A + SY SPE S +SD+WS G L+E+ GR S + +L +
Sbjct: 178 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDY 237
Query: 489 VLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548
++ + + +F L+ +C K+P +R ++ +++ I
Sbjct: 238 IVNEPPPKLPSGVFS-------------LEFQDFVNKCLIKNPAERADLKQLMVHAFI-- 282
Query: 549 VTESTEEEEDF--WL 561
S EE DF WL
Sbjct: 283 -KRSDAEEVDFAGWL 296
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 117/273 (42%), Gaps = 48/273 (17%)
Query: 294 PVVVKRLRDLKPLITEEFRKQLL----VIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNG 349
PV +K LK TE R+ L ++ HPN++ L ++V ++ NG
Sbjct: 79 PVAIK---ALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENG 135
Query: 350 NL--FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTN 407
+L F R H G+ F + + RGV + YL + +H +L + N
Sbjct: 136 SLDTFLRTHDGQ-------FTIMQLVGMLRGVGAGMRYL-------SDLGYVHRDLAARN 181
Query: 408 ILLDDNEMVLVSDYGFSSLVAQ-PIAAQRM------ISYKSPEYQSSKKISRKSDVWSFG 460
+L+D N + VSD+G S ++ P AA I + +PE + + S SDVWSFG
Sbjct: 182 VLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFG 241
Query: 461 CLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLL 520
++ E+L + D+ S V R + H + +L+
Sbjct: 242 VVMWEVLA---YGERPYWNMTNRDVISSVEEGYR-----------LPAPMGCPHALHQLM 287
Query: 521 QVAIQCCNKSPEKRPEMAEVVSELE-IIKVTES 552
+ C +K +RP +++VS L+ +I+ ES
Sbjct: 288 ---LDCWHKDRAQRPRFSQIVSVLDALIRSPES 317
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 18/198 (9%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
LG G FG G+ V +K +++ + +EF ++ V+ + H L+ L
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
++ ++ NG L N + + R F+ + L + + V A+EYL K
Sbjct: 76 QRPIFIITEYMANGCLLNYLR-----EMRHRFQTQQLLEMCKDVCEAMEYLESKQ----- 125
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV-----AQPIAAQRMISYKSPEYQSSKKI 450
+H +L + N L++D +V VSD+G S V ++ + + PE K
Sbjct: 126 --FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKF 183
Query: 451 SRKSDVWSFGCLLLELLT 468
S KSD+W+FG L+ E+ +
Sbjct: 184 SSKSDIWAFGVLMWEIYS 201
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 22/201 (10%)
Query: 276 LGKGIFGNSY--KALLEGR--APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
LG G FG + ++ GR A V+K+ ++ E + L+++ HP ++ +
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
+ + ++ + G LF+ + + N + A V ALEYLH KD
Sbjct: 74 TFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVA------KFYAAEVCLALEYLHSKD- 126
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS---YKSPEYQSSK 448
+I+ +LK NILLD N + ++D+GF+ V P + Y +PE S+K
Sbjct: 127 ------IIYRDLKPENILLDKNGHIKITDFGFAKYV--PDVTYXLCGTPDYIAPEVVSTK 178
Query: 449 KISRKSDVWSFGCLLLELLTG 469
++ D WSFG L+ E+L G
Sbjct: 179 PYNKSIDWWSFGILIYEMLAG 199
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 125/286 (43%), Gaps = 42/286 (14%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
LG G FG + A V VK ++ + E F + V+ +H L+ L A +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKP-GSMSVEAFLAEANVMKTLQHDKLVKLHAV-VT 247
Query: 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
+ ++ +F G+L + + + SK +P +A G+A ++ ++
Sbjct: 248 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA----FIEQRN----- 298
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYKSPEYQSSKKISRKSD 455
IH +L++ NIL+ + + ++D+G + + A+ I + +PE + + KSD
Sbjct: 299 --YIHRDLRAANILVSASLVCKIADFGLAR-----VGAKFPIKWTAPEAINFGSFTIKSD 351
Query: 456 VWSFGCLLLELLT-GRI--STHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQRSA 512
VWSFG LL+E++T GRI S P+ I + R R E E
Sbjct: 352 VWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG---YRMPRPENCPE------------ 396
Query: 513 AHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL-EIIKVTESTEEEE 557
+L + ++C PE+RP + S L + TES +++
Sbjct: 397 -----ELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQXQQQ 437
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 118/286 (41%), Gaps = 41/286 (14%)
Query: 273 AEGLGKGIFGNSYKALLEG-RAPVVVKRLRD-LKPLITEEFRKQLLVIADQKHPNLLPLL 330
E +G+G FG + L V VK R+ L P + +F ++ ++ HPN++ L+
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 331 AYYFSNDEKLLVYKFAGNGNL--FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
+V + G+ F R G + R ++ L + A +EYL
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGAR-------LRVKTLLQMVGDAAAGMEYLES 231
Query: 389 KDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAA------QRMISYKSP 442
K IH +L + N L+ + ++ +SD+G S A + A Q + + +P
Sbjct: 232 K-------CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAP 284
Query: 443 EYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIF 502
E + + S +SDVWSFG LL E + S + +L + R E+
Sbjct: 285 EALNYGRYSSESDVWSFGILLWETFSLGASPY--------PNLSNQQTREFVEK------ 330
Query: 503 DSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548
+ + +L++ QC P +RP + + EL+ I+
Sbjct: 331 GGRLPCPELCPDAVFRLME---QCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 130/300 (43%), Gaps = 59/300 (19%)
Query: 274 EGLGKGIFGNSYKALLEGRAP------VVVKRLRD-LKPLITEEFRKQLLVIADQKHPNL 326
E LG+ FG YK L G AP V +K L+D + + EEFR + ++ A +HPN+
Sbjct: 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 91
Query: 327 LPLLAYYFSNDEKLLVYKFAGNGNLFNRI-----HG--GKSSKNRIPFRCRSRL------ 373
+ LL + +++ + +G+L + H G + +R +S L
Sbjct: 92 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT---VKSALEPPDFV 148
Query: 374 -LVARGVARALEYL--HHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP 430
LVA+ +A +EYL HH V+H +L + N+L+ D V +SD G V
Sbjct: 149 HLVAQ-IAAGMEYLSSHH---------VVHKDLATRNVLVYDKLNVKISDLGLFREVYAA 198
Query: 431 IAAQRM------ISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGAD 484
+ + I + +PE K S SD+WS+G +L E+ + + + G + D
Sbjct: 199 DYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYC---GYSNQD 255
Query: 485 LCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
V+ +R D + + + I+C N+ P +RP ++ S L
Sbjct: 256 ----VVEMIRNRQVLPCPDDCPAW----------VYALMIECWNEFPSRRPRFKDIHSRL 301
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 130/300 (43%), Gaps = 59/300 (19%)
Query: 274 EGLGKGIFGNSYKALLEGRAP------VVVKRLRD-LKPLITEEFRKQLLVIADQKHPNL 326
E LG+ FG YK L G AP V +K L+D + + EEFR + ++ A +HPN+
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 327 LPLLAYYFSNDEKLLVYKFAGNGNLFNRI-----HG--GKSSKNRIPFRCRSRL------ 373
+ LL + +++ + +G+L + H G + +R +S L
Sbjct: 75 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT---VKSALEPPDFV 131
Query: 374 -LVARGVARALEYL--HHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP 430
LVA+ +A +EYL HH V+H +L + N+L+ D V +SD G V
Sbjct: 132 HLVAQ-IAAGMEYLSSHH---------VVHKDLATRNVLVYDKLNVKISDLGLFREVYAA 181
Query: 431 IAAQRM------ISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGAD 484
+ + I + +PE K S SD+WS+G +L E+ + + + G + D
Sbjct: 182 DYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYC---GYSNQD 238
Query: 485 LCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
V+ +R D + + + I+C N+ P +RP ++ S L
Sbjct: 239 ----VVEMIRNRQVLPCPDDCPAW----------VYALMIECWNEFPSRRPRFKDIHSRL 284
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 118/286 (41%), Gaps = 41/286 (14%)
Query: 273 AEGLGKGIFGNSYKALLEG-RAPVVVKRLRD-LKPLITEEFRKQLLVIADQKHPNLLPLL 330
E +G+G FG + L V VK R+ L P + +F ++ ++ HPN++ L+
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 331 AYYFSNDEKLLVYKFAGNGNL--FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
+V + G+ F R G + R ++ L + A +EYL
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGAR-------LRVKTLLQMVGDAAAGMEYLES 231
Query: 389 KDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAA------QRMISYKSP 442
K IH +L + N L+ + ++ +SD+G S A + A Q + + +P
Sbjct: 232 K-------CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAP 284
Query: 443 EYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIF 502
E + + S +SDVWSFG LL E + S + +L + R E+
Sbjct: 285 EALNYGRYSSESDVWSFGILLWETFSLGASPY--------PNLSNQQTREFVEK------ 330
Query: 503 DSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548
+ + +L++ QC P +RP + + EL+ I+
Sbjct: 331 GGRLPCPELCPDAVFRLME---QCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 126/292 (43%), Gaps = 46/292 (15%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKP--LITEEFRKQLLVIADQKHPNLLPLLAYY 333
LG G FG + A V VK +KP + E F + V+ +H L+ L A
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVK---TMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAV- 251
Query: 334 FSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSR 393
+ + ++ +F G+L + + + SK +P +A G+A ++ ++
Sbjct: 252 VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA----FIEQRN--- 304
Query: 394 TQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV-----AQPIAAQRMISYKSPEYQSSK 448
IH +L++ NIL+ + + ++D+G + ++ A+ I + +PE +
Sbjct: 305 ----YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG 360
Query: 449 KISRKSDVWSFGCLLLELLT-GRI--STHSAPQGINGADLCSWVLRAVREEWTAEIFDSE 505
+ KSDVWSFG LL+E++T GRI S P+ I + R R E E
Sbjct: 361 SFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG---YRMPRPENCPE----- 412
Query: 506 ISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL-EIIKVTESTEEE 556
+L + ++C PE+RP + S L + TES EE
Sbjct: 413 ------------ELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQXEE 452
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 119/290 (41%), Gaps = 51/290 (17%)
Query: 276 LGKGIFGNSYKA----LLEGRAPVVVKRLRDLKPLI-TEEFRKQLLVIADQKHPNLLPLL 330
+GKG FG Y + R +K L + + E F ++ L++ HPN+L L+
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 331 AYYFSND---EKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
+ LL Y G+ F R S R P + + VAR +EYL
Sbjct: 89 GIMLPPEGLPHVLLPYMCHGDLLQFIR------SPQRNP-TVKDLISFGLQVARGMEYL- 140
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSS--------LVAQPIAAQRMISY 439
+ +H +L + N +LD++ V V+D+G + V Q A+ + +
Sbjct: 141 ------AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKW 194
Query: 440 KSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP--QGINGADLCSWVLRAVREEW 497
+ E + + + KSDVWSFG LL ELL T AP + I+ DL ++ + R
Sbjct: 195 TALESLQTYRFTTKSDVWSFGVLLWELL-----TRGAPPYRHIDPFDLTHFLAQGRRLPQ 249
Query: 498 TAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
DS L QV QC P RP +V E+E I
Sbjct: 250 PEYCPDS--------------LYQVMQQCWEADPAVRPTFRVLVGEVEQI 285
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 141/319 (44%), Gaps = 63/319 (19%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKR-----LRDLKPLITEEFRKQLL----VIADQKHPNL 326
+G G FG + GR + K+ ++ LK TE+ R+ L ++ HPN+
Sbjct: 53 VGAGEFGE----VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 108
Query: 327 LPLLAYYFSNDEKLLVYKFAGNGNL--FNRIHGGKSSKNRIPFRCRSRLLVARGVARALE 384
+ L + ++V ++ NG+L F R H + F + + RG+A ++
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-------FTVIQLVGMLRGIASGMK 161
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ-PIAAQRM------I 437
YL + +H +L + NIL++ N + VSD+G S ++ P AA I
Sbjct: 162 YL-------SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 438 SYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQG-INGADLCSWVLRAVREE 496
+ SPE + +K + SDVWS+G +L E++ S P ++ D V++AV E
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVM----SYGERPYWEMSNQD----VIKAVDEG 266
Query: 497 WTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE-IIK------- 548
+ + AA L Q+ + C K RP+ ++VS L+ +I+
Sbjct: 267 -----YRLPPPMDCPAA-----LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKI 316
Query: 549 VTESTEEEEDFWLDQSLTD 567
+T + + LDQS D
Sbjct: 317 ITSAAARPSNLLLDQSNVD 335
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 141/319 (44%), Gaps = 63/319 (19%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKR-----LRDLKPLITEEFRKQLL----VIADQKHPNL 326
+G G FG + GR + K+ ++ LK TE+ R+ L ++ HPN+
Sbjct: 53 VGAGEFGE----VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 108
Query: 327 LPLLAYYFSNDEKLLVYKFAGNGNL--FNRIHGGKSSKNRIPFRCRSRLLVARGVARALE 384
+ L + ++V ++ NG+L F R H + F + + RG+A ++
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-------FTVIQLVGMLRGIASGMK 161
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ-PIAAQRM------I 437
YL + +H +L + NIL++ N + VSD+G S ++ P AA I
Sbjct: 162 YL-------SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 438 SYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQG-INGADLCSWVLRAVREE 496
+ SPE + +K + SDVWS+G +L E++ S P ++ D V++AV E
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVM----SYGERPYWEMSNQD----VIKAVDEG 266
Query: 497 WTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE-IIK------- 548
+ + AA L Q+ + C K RP+ ++VS L+ +I+
Sbjct: 267 -----YRLPPPMDCPAA-----LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKI 316
Query: 549 VTESTEEEEDFWLDQSLTD 567
+T + + LDQS D
Sbjct: 317 ITSAAARPSNLLLDQSNVD 335
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 141/319 (44%), Gaps = 63/319 (19%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKR-----LRDLKPLITEEFRKQLL----VIADQKHPNL 326
+G G FG + GR + K+ ++ LK TE+ R+ L ++ HPN+
Sbjct: 53 VGAGEFGE----VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 108
Query: 327 LPLLAYYFSNDEKLLVYKFAGNGNL--FNRIHGGKSSKNRIPFRCRSRLLVARGVARALE 384
+ L + ++V ++ NG+L F R H + F + + RG+A ++
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-------FTVIQLVGMLRGIASGMK 161
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ-PIAAQRM------I 437
YL + +H +L + NIL++ N + VSD+G S ++ P AA I
Sbjct: 162 YL-------SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 438 SYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQG-INGADLCSWVLRAVREE 496
+ SPE + +K + SDVWS+G +L E++ S P ++ D V++AV E
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVM----SYGERPYWEMSNQD----VIKAVDEG 266
Query: 497 WTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE-IIK------- 548
+ + AA L Q+ + C K RP+ ++VS L+ +I+
Sbjct: 267 -----YRLPPPMDCPAA-----LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKI 316
Query: 549 VTESTEEEEDFWLDQSLTD 567
+T + + LDQS D
Sbjct: 317 ITSAAARPSNLLLDQSNVD 335
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 141/319 (44%), Gaps = 63/319 (19%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKR-----LRDLKPLITEEFRKQLL----VIADQKHPNL 326
+G G FG + GR + K+ ++ LK TE+ R+ L ++ HPN+
Sbjct: 53 VGAGEFGE----VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 108
Query: 327 LPLLAYYFSNDEKLLVYKFAGNGNL--FNRIHGGKSSKNRIPFRCRSRLLVARGVARALE 384
+ L + ++V ++ NG+L F R H + F + + RG+A ++
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-------FTVIQLVGMLRGIASGMK 161
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ-PIAAQRM------I 437
YL + +H +L + NIL++ N + VSD+G S ++ P AA I
Sbjct: 162 YL-------SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 438 SYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQG-INGADLCSWVLRAVREE 496
+ SPE + +K + SDVWS+G +L E++ S P ++ D V++AV E
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVM----SYGERPYWEMSNQD----VIKAVDEG 266
Query: 497 WTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE-IIK------- 548
+ + AA L Q+ + C K RP+ ++VS L+ +I+
Sbjct: 267 -----YRLPPPMDCPAA-----LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKI 316
Query: 549 VTESTEEEEDFWLDQSLTD 567
+T + + LDQS D
Sbjct: 317 ITSAAARPSNLLLDQSNVD 335
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 141/319 (44%), Gaps = 63/319 (19%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKR-----LRDLKPLITEEFRKQLL----VIADQKHPNL 326
+G G FG + GR + K+ ++ LK TE+ R+ L ++ HPN+
Sbjct: 53 VGAGEFGE----VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 108
Query: 327 LPLLAYYFSNDEKLLVYKFAGNGNL--FNRIHGGKSSKNRIPFRCRSRLLVARGVARALE 384
+ L + ++V ++ NG+L F R H + F + + RG+A ++
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-------FTVIQLVGMLRGIASGMK 161
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ-PIAAQRM------I 437
YL + +H +L + NIL++ N + VSD+G S ++ P AA I
Sbjct: 162 YL-------SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 438 SYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQG-INGADLCSWVLRAVREE 496
+ SPE + +K + SDVWS+G +L E++ S P ++ D V++AV E
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVM----SYGERPYWEMSNQD----VIKAVDEG 266
Query: 497 WTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE-IIK------- 548
+ + AA L Q+ + C K RP+ ++VS L+ +I+
Sbjct: 267 -----YRLPPPMDCPAA-----LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKI 316
Query: 549 VTESTEEEEDFWLDQSLTD 567
+T + + LDQS D
Sbjct: 317 ITSAAARPSNLLLDQSNVD 335
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 141/319 (44%), Gaps = 63/319 (19%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKR-----LRDLKPLITEEFRKQLL----VIADQKHPNL 326
+G G FG + GR + K+ ++ LK TE+ R+ L ++ HPN+
Sbjct: 51 VGAGEFGE----VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 106
Query: 327 LPLLAYYFSNDEKLLVYKFAGNGNL--FNRIHGGKSSKNRIPFRCRSRLLVARGVARALE 384
+ L + ++V ++ NG+L F R H + F + + RG+A ++
Sbjct: 107 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-------FTVIQLVGMLRGIASGMK 159
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ-PIAAQRM------I 437
YL + +H +L + NIL++ N + VSD+G S ++ P AA I
Sbjct: 160 YL-------SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 212
Query: 438 SYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQG-INGADLCSWVLRAVREE 496
+ SPE + +K + SDVWS+G +L E++ S P ++ D V++AV E
Sbjct: 213 RWTSPEAIAYRKFTSASDVWSYGIVLWEVM----SYGERPYWEMSNQD----VIKAVDEG 264
Query: 497 WTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE-IIK------- 548
+ + AA L Q+ + C K RP+ ++VS L+ +I+
Sbjct: 265 -----YRLPPPMDCPAA-----LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKI 314
Query: 549 VTESTEEEEDFWLDQSLTD 567
+T + + LDQS D
Sbjct: 315 ITSAAARPSNLLLDQSNVD 333
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 30/208 (14%)
Query: 276 LGKGIFGN--SYKALLEGRAPVVVKRLRDLKPLITEEFRKQLL----VIADQKHPNLLPL 329
+G G FG S + L G+ V V ++ LK TE+ R+ L ++ HPN++ L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVA-IKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL 109
Query: 330 LAYYFSNDEKLLVYKFAGNGNL--FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
++V +F NG L F R H G+ F + + RG+A + YL
Sbjct: 110 EGVVTRGKPVMIVIEFMENGALDAFLRKHDGQ-------FTVIQLVGMLRGIAAGMRYL- 161
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSL-------VAQPIAAQRMISYK 440
+H +L + NIL++ N + VSD+G S + V + + +
Sbjct: 162 ------ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWT 215
Query: 441 SPEYQSSKKISRKSDVWSFGCLLLELLT 468
+PE +K + SDVWS+G ++ E+++
Sbjct: 216 APEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 119/287 (41%), Gaps = 53/287 (18%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
LG G FG +G+ V VK +++ + +EF ++ + HP L+
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKE-GSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 336 NDEKLLVYKFAGNGNLFN--RIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSR 393
+V ++ NG L N R HG +++ C V G+A LE
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYD---VCEGMA-FLE--------- 121
Query: 394 TQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV-----AQPIAAQRMISYKSPEYQSSK 448
IH +L + N L+D + V VSD+G + V + + + + +PE
Sbjct: 122 -SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYF 180
Query: 449 KISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISV 508
K S KSDVW+FG L+ E+ + G DL + +SE+ +
Sbjct: 181 KYSSKSDVWAFGILMWEVFS---------LGKMPYDLYT---------------NSEVVL 216
Query: 509 QRSAAHGMLK-------LLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548
+ S H + + + Q+ C ++ PEKRP +++S +E ++
Sbjct: 217 KVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLR 263
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 141/319 (44%), Gaps = 63/319 (19%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKR-----LRDLKPLITEEFRKQLL----VIADQKHPNL 326
+G G FG + GR + K+ ++ LK TE+ R+ L ++ HPN+
Sbjct: 24 VGAGEFGE----VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 79
Query: 327 LPLLAYYFSNDEKLLVYKFAGNGNL--FNRIHGGKSSKNRIPFRCRSRLLVARGVARALE 384
+ L + ++V ++ NG+L F R H + F + + RG+A ++
Sbjct: 80 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-------FTVIQLVGMLRGIASGMK 132
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ-PIAAQRM------I 437
YL + +H +L + NIL++ N + VSD+G S ++ P AA I
Sbjct: 133 YL-------SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 185
Query: 438 SYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQG-INGADLCSWVLRAVREE 496
+ SPE + +K + SDVWS+G +L E++ S P ++ D V++AV E
Sbjct: 186 RWTSPEAIAYRKFTSASDVWSYGIVLWEVM----SYGERPYWEMSNQD----VIKAVDEG 237
Query: 497 WTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE-IIK------- 548
+ + AA L Q+ + C K RP+ ++VS L+ +I+
Sbjct: 238 -----YRLPPPMDCPAA-----LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKI 287
Query: 549 VTESTEEEEDFWLDQSLTD 567
+T + + LDQS D
Sbjct: 288 ITSAAARPSNLLLDQSNVD 306
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 107/245 (43%), Gaps = 28/245 (11%)
Query: 309 EEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRI-HGGKSSKNRIPF 367
+E K++ ++ HPN++ + DE LV K G++ + I H +++
Sbjct: 58 DELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGV 117
Query: 368 RCRSRL-LVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSL 426
S + + R V LEYLH ++ IH ++K+ NILL ++ V ++D+G S+
Sbjct: 118 LDESTIATILREVLEGLEYLH-------KNGQIHRDVKAGNILLGEDGSVQIADFGVSAF 170
Query: 427 VAQPIAAQR---------MISYKSPE-YQSSKKISRKSDVWSFGCLLLELLTGRISTHSA 476
+A R + +PE + + K+D+WSFG +EL TG H
Sbjct: 171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKY 230
Query: 477 PQGINGADLCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPE 536
P + +L + + E + + + K++ + C K PEKRP
Sbjct: 231 P------PMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISL---CLQKDPEKRPT 281
Query: 537 MAEVV 541
AE++
Sbjct: 282 AAELL 286
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 141/319 (44%), Gaps = 63/319 (19%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKR-----LRDLKPLITEEFRKQLL----VIADQKHPNL 326
+G G FG + GR + K+ ++ LK TE+ R+ L ++ HPN+
Sbjct: 41 VGAGEFGE----VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 96
Query: 327 LPLLAYYFSNDEKLLVYKFAGNGNL--FNRIHGGKSSKNRIPFRCRSRLLVARGVARALE 384
+ L + ++V ++ NG+L F R H + F + + RG+A ++
Sbjct: 97 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-------FTVIQLVGMLRGIASGMK 149
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ-PIAAQRM------I 437
YL + +H +L + NIL++ N + VSD+G S ++ P AA I
Sbjct: 150 YL-------SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 202
Query: 438 SYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQG-INGADLCSWVLRAVREE 496
+ SPE + +K + SDVWS+G +L E++ S P ++ D V++AV E
Sbjct: 203 RWTSPEAIAYRKFTSASDVWSYGIVLWEVM----SYGERPYWEMSNQD----VIKAVDEG 254
Query: 497 WTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE-IIK------- 548
+ + AA L Q+ + C K RP+ ++VS L+ +I+
Sbjct: 255 -----YRLPPPMDCPAA-----LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKI 304
Query: 549 VTESTEEEEDFWLDQSLTD 567
+T + + LDQS D
Sbjct: 305 ITSAAARPSNLLLDQSNVD 323
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 107/245 (43%), Gaps = 28/245 (11%)
Query: 309 EEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRI-HGGKSSKNRIPF 367
+E K++ ++ HPN++ + DE LV K G++ + I H +++
Sbjct: 53 DELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGV 112
Query: 368 RCRSRL-LVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSL 426
S + + R V LEYLH ++ IH ++K+ NILL ++ V ++D+G S+
Sbjct: 113 LDESTIATILREVLEGLEYLH-------KNGQIHRDVKAGNILLGEDGSVQIADFGVSAF 165
Query: 427 VAQPIAAQR---------MISYKSPE-YQSSKKISRKSDVWSFGCLLLELLTGRISTHSA 476
+A R + +PE + + K+D+WSFG +EL TG H
Sbjct: 166 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKY 225
Query: 477 PQGINGADLCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPE 536
P + +L + + E + + + K++ + C K PEKRP
Sbjct: 226 P------PMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISL---CLQKDPEKRPT 276
Query: 537 MAEVV 541
AE++
Sbjct: 277 AAELL 281
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 21/160 (13%)
Query: 317 VIADQKHPNLLPLLAYYFSNDEKLLV-YKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLV 375
V++ HP + L + F +DEKL +A NG L I S C +R
Sbjct: 85 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDET----C-TRFYT 138
Query: 376 ARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR 435
A + ALEYLH K +IH +LK NILL+++ + ++D+G + +++ R
Sbjct: 139 AE-IVSALEYLHGK-------GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
Query: 436 MIS------YKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
S Y SPE + K S+ SD+W+ GC++ +L+ G
Sbjct: 191 ANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 29/172 (16%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS-SLVAQPIAAQR-- 435
VAR +E+L + IH +L + NILL +N +V + D+G + + P ++
Sbjct: 208 VARGMEFL-------SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGD 260
Query: 436 ---MISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRA 492
+ + +PE K S KSDVWS+G LL E+ + S + Q D CS +
Sbjct: 261 TRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQ--MDEDFCSRLREG 318
Query: 493 VREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
+R R+ + ++ Q+ + C ++ P++RP AE+V +L
Sbjct: 319 MR--------------MRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 141/319 (44%), Gaps = 63/319 (19%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKR-----LRDLKPLITEEFRKQLL----VIADQKHPNL 326
+G G FG + GR + K+ ++ LK TE+ R+ L ++ HPN+
Sbjct: 53 VGAGEFGE----VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 108
Query: 327 LPLLAYYFSNDEKLLVYKFAGNGNL--FNRIHGGKSSKNRIPFRCRSRLLVARGVARALE 384
+ L + ++V ++ NG+L F R H + F + + RG+A ++
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-------FTVIQLVGMLRGIASGMK 161
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ-PIAAQRM------I 437
YL + +H +L + NIL++ N + VSD+G + ++ P AA I
Sbjct: 162 YL-------SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPI 214
Query: 438 SYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQG-INGADLCSWVLRAVREE 496
+ SPE + +K + SDVWS+G +L E++ S P ++ D V++AV E
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVM----SYGERPYWEMSNQD----VIKAVDEG 266
Query: 497 WTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE-IIK------- 548
+ + AA L Q+ + C K RP+ ++VS L+ +I+
Sbjct: 267 -----YRLPPPMDCPAA-----LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKI 316
Query: 549 VTESTEEEEDFWLDQSLTD 567
+T + + LDQS D
Sbjct: 317 ITSAAARPSNLLLDQSNVD 335
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 96/215 (44%), Gaps = 29/215 (13%)
Query: 276 LGKGIFGNSYKALLEGRAP------VVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPL 329
LG+G FG + A +P V VK L+D ++F+++ ++ + +H +++
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 330 LAYYFSNDEKLLVYKFAGNGNL--FNRIHG--------GKSSKNRIPFRCRSRLLVARGV 379
D ++V+++ +G+L F R HG G+ + + L +A +
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 380 ARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP----IAAQR 435
A + YL +H +L + N L+ N +V + D+G S V +
Sbjct: 143 ASGMVYL-------ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHT 195
Query: 436 M--ISYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
M I + PE +K + +SDVWSFG +L E+ T
Sbjct: 196 MLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 29/207 (14%)
Query: 276 LGKGIFGNSYKALL--EG---RAPVVVKRLRDLK-PLITEEFRKQLLVIADQKHPNLLPL 329
LG G FG YK + EG + PV +K L + P EF + L++A HP+L+ L
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLV--ARGVARALEYLH 387
L S +L V + +G L +H K + S+LL+ +A+ + YL
Sbjct: 83 LGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIG-------SQLLLNWCVQIAKGMMYLE 134
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA------QPIAAQRMISYKS 441
+ ++H +L + N+L+ V ++D+G + L+ + I + +
Sbjct: 135 ER-------RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMA 187
Query: 442 PEYQSSKKISRKSDVWSFGCLLLELLT 468
E +K + +SDVWS+G + EL+T
Sbjct: 188 LECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 21/160 (13%)
Query: 317 VIADQKHPNLLPLLAYYFSNDEKLLV-YKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLV 375
V++ HP + L + F +DEKL +A NG L I S C +R
Sbjct: 86 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----C-TRFYT 139
Query: 376 ARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR 435
A + ALEYLH K +IH +LK NILL+++ + ++D+G + +++ R
Sbjct: 140 AE-IVSALEYLHGK-------GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 191
Query: 436 MIS------YKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
S Y SPE + K + SD+W+ GC++ +L+ G
Sbjct: 192 ANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 29/207 (14%)
Query: 276 LGKGIFGNSYKALL--EG---RAPVVVKRLRDLK-PLITEEFRKQLLVIADQKHPNLLPL 329
LG G FG YK + EG + PV +K L + P EF + L++A HP+L+ L
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLV--ARGVARALEYLH 387
L S +L V + +G L +H K + S+LL+ +A+ + YL
Sbjct: 106 LGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIG-------SQLLLNWCVQIAKGMMYLE 157
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA------QPIAAQRMISYKS 441
+ ++H +L + N+L+ V ++D+G + L+ + I + +
Sbjct: 158 ER-------RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMA 210
Query: 442 PEYQSSKKISRKSDVWSFGCLLLELLT 468
E +K + +SDVWS+G + EL+T
Sbjct: 211 LECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 140/319 (43%), Gaps = 63/319 (19%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKR-----LRDLKPLITEEFRKQLL----VIADQKHPNL 326
+G G FG + GR + K+ ++ LK TE+ R+ L ++ HPN+
Sbjct: 53 VGAGEFGE----VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 108
Query: 327 LPLLAYYFSNDEKLLVYKFAGNGNL--FNRIHGGKSSKNRIPFRCRSRLLVARGVARALE 384
+ L + ++V ++ NG+L F R H + F + + RG+A ++
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-------FTVIQLVGMLRGIASGMK 161
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ-PIAAQRM------I 437
YL + +H +L + NIL++ N + VSD+G ++ P AA I
Sbjct: 162 YL-------SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPI 214
Query: 438 SYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQG-INGADLCSWVLRAVREE 496
+ SPE + +K + SDVWS+G +L E++ S P ++ D V++AV E
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVM----SYGERPYWEMSNQD----VIKAVDEG 266
Query: 497 WTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE-IIK------- 548
+ + AA L Q+ + C K RP+ ++VS L+ +I+
Sbjct: 267 -----YRLPPPMDCPAA-----LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKI 316
Query: 549 VTESTEEEEDFWLDQSLTD 567
+T + + LDQS D
Sbjct: 317 ITSAAARPSNLLLDQSNVD 335
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 23/203 (11%)
Query: 276 LGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
LGKG FGN Y A + R A V+ + + K + + R+++ + + +HPN+L L
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
Y+ L+ ++A G ++ + K SK F + +A AL Y H K
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQ--KLSK----FDEQRTATYITELANALSYCHSK-- 124
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPEYQSS 447
VIH ++K N+LL + ++D+G+S V P + + + Y PE
Sbjct: 125 -----RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 177
Query: 448 KKISRKSDVWSFGCLLLELLTGR 470
+ K D+WS G L E L G+
Sbjct: 178 RMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 21/171 (12%)
Query: 317 VIADQKHPNLLPLLAYYFSNDEKLLV-YKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLV 375
V++ HP + L + F +DEKL +A NG L I S C +R
Sbjct: 85 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----C-TRFYT 138
Query: 376 ARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR 435
A + ALEYLH K +IH +LK NILL+++ + ++D+G + +++ R
Sbjct: 139 AE-IVSALEYLHGK-------GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
Query: 436 ------MISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGI 480
Y SPE + K + SD+W+ GC++ +L+ G + +G+
Sbjct: 191 ANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGL 241
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 140/319 (43%), Gaps = 63/319 (19%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKR-----LRDLKPLITEEFRKQLL----VIADQKHPNL 326
+G G FG + GR + K+ ++ LK TE+ R+ L ++ HPN+
Sbjct: 53 VGAGEFGE----VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 108
Query: 327 LPLLAYYFSNDEKLLVYKFAGNGNL--FNRIHGGKSSKNRIPFRCRSRLLVARGVARALE 384
+ L + ++V + NG+L F R H + F + + RG+A ++
Sbjct: 109 IRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ-------FTVIQLVGMLRGIASGMK 161
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ-PIAAQRM------I 437
YL + +H +L + NIL++ N + VSD+G S ++ P AA I
Sbjct: 162 YL-------SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 438 SYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQG-INGADLCSWVLRAVREE 496
+ SPE + +K + SDVWS+G +L E++ S P ++ D V++AV E
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVM----SYGERPYWEMSNQD----VIKAVDEG 266
Query: 497 WTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE-IIK------- 548
+ + AA L Q+ + C K RP+ ++VS L+ +I+
Sbjct: 267 -----YRLPPPMDCPAA-----LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKI 316
Query: 549 VTESTEEEEDFWLDQSLTD 567
+T + + LDQS D
Sbjct: 317 ITSAAARPSNLLLDQSNVD 335
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 21/160 (13%)
Query: 317 VIADQKHPNLLPLLAYYFSNDEKLLV-YKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLV 375
V++ HP + L + F +DEKL +A NG L I S C +R
Sbjct: 83 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----C-TRFYT 136
Query: 376 ARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR 435
A + ALEYLH K +IH +LK NILL+++ + ++D+G + +++ R
Sbjct: 137 AE-IVSALEYLHGK-------GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 188
Query: 436 ------MISYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
Y SPE + K + SD+W+ GC++ +L+ G
Sbjct: 189 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 21/160 (13%)
Query: 317 VIADQKHPNLLPLLAYYFSNDEKLLV-YKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLV 375
V++ HP + L + F +DEKL +A NG L I S C +R
Sbjct: 82 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----C-TRFYT 135
Query: 376 ARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR 435
A + ALEYLH K +IH +LK NILL+++ + ++D+G + +++ R
Sbjct: 136 AE-IVSALEYLHGK-------GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 187
Query: 436 MIS------YKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
S Y SPE + K + SD+W+ GC++ +L+ G
Sbjct: 188 ANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 134/309 (43%), Gaps = 38/309 (12%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRL--RDLKPLITEEFRKQLLVIADQKHPNLLPLLAYY 333
LG G G +K + V+ ++L ++KP I + ++L V+ + P ++ +
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 76
Query: 334 FSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSR 393
+S+ E + + G+L + RIP + ++ +A V + L YL K K
Sbjct: 77 YSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIA--VIKGLTYLREKHK-- 128
Query: 394 TQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM--ISYKSPEYQSSKKIS 451
++H ++K +NIL++ + + D+G S + +A + + SY SPE S
Sbjct: 129 ----IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQGTHYS 184
Query: 452 RKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQRS 511
+SD+WS G L+E+ GR P I +L +++ + + +F
Sbjct: 185 VQSDIWSMGLSLVEMAVGRYP--RPPMAI--FELLDYIVNEPPPKLPSAVFS-------- 232
Query: 512 AAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTESTEEEEDF--WLDQSLTDES 569
L+ +C K+P +R ++ +++ I S EE DF WL ++
Sbjct: 233 -----LEFQDFVNKCLIKNPAERADLKQLMVHAFI---KRSDAEEVDFAGWLCSTIGLNQ 284
Query: 570 LSISTVASA 578
S T A+
Sbjct: 285 PSTPTHAAG 293
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 21/160 (13%)
Query: 317 VIADQKHPNLLPLLAYYFSNDEKLLV-YKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLV 375
V++ HP + L + F +DEKL +A NG L I S C +R
Sbjct: 62 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----C-TRFYT 115
Query: 376 ARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR 435
A V+ ALEYLH K +IH +LK NILL+++ + ++D+G + +++ R
Sbjct: 116 AEIVS-ALEYLHGK-------GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 167
Query: 436 ------MISYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
Y SPE + K + SD+W+ GC++ +L+ G
Sbjct: 168 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 21/160 (13%)
Query: 317 VIADQKHPNLLPLLAYYFSNDEKLLV-YKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLV 375
V++ HP + L + F +DEKL +A NG L I S C +R
Sbjct: 63 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----C-TRFYT 116
Query: 376 ARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR 435
A V+ ALEYLH K +IH +LK NILL+++ + ++D+G + +++ R
Sbjct: 117 AEIVS-ALEYLHGK-------GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 168
Query: 436 ------MISYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
Y SPE + K + SD+W+ GC++ +L+ G
Sbjct: 169 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 21/171 (12%)
Query: 317 VIADQKHPNLLPLLAYYFSNDEKLLV-YKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLV 375
V++ HP + L + F +DEKL +A NG L I S C +R
Sbjct: 85 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----C-TRFYT 138
Query: 376 ARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR 435
A + ALEYLH K +IH +LK NILL+++ + ++D+G + +++ R
Sbjct: 139 AE-IVSALEYLHGK-------GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
Query: 436 ------MISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGI 480
Y SPE + K + SD+W+ GC++ +L+ G + +G+
Sbjct: 191 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGL 241
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 121/280 (43%), Gaps = 45/280 (16%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKP--LITEEFRKQLLVIADQKHPNLLPLLAYY 333
LG G FG + A V VK +KP + E F + V+ +H L+ L A
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVK---TMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAV- 78
Query: 334 FSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSR 393
+ + ++ +F G+L + + + SK +P +A G+A ++ ++
Sbjct: 79 VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA----FIEQRN--- 131
Query: 394 TQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV-----AQPIAAQRMISYKSPEYQSSK 448
IH +L++ NIL+ + + ++D+G + ++ A+ I + +PE +
Sbjct: 132 ----YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG 187
Query: 449 KISRKSDVWSFGCLLLELLT-GRI--STHSAPQGINGADLCSWVLRAVREEWTAEIFDSE 505
+ KSDVWSFG LL+E++T GRI S P+ I + R R E E
Sbjct: 188 SFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG---YRMPRPENCPE----- 239
Query: 506 ISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
+L + ++C PE+RP + S L+
Sbjct: 240 ------------ELYNIMMRCWKNRPEERPTFEYIQSVLD 267
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 21/160 (13%)
Query: 317 VIADQKHPNLLPLLAYYFSNDEKLLV-YKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLV 375
V++ HP + L + F +DEKL +A NG L I S C +R
Sbjct: 83 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----C-TRFYT 136
Query: 376 ARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR 435
A + ALEYLH K +IH +LK NILL+++ + ++D+G + +++ R
Sbjct: 137 AE-IVSALEYLHGK-------GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 188
Query: 436 ------MISYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
Y SPE + K + SD+W+ GC++ +L+ G
Sbjct: 189 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 21/160 (13%)
Query: 317 VIADQKHPNLLPLLAYYFSNDEKLLV-YKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLV 375
V++ HP + L + F +DEKL +A NG L I S C +R
Sbjct: 85 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----C-TRFYT 138
Query: 376 ARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR 435
A + ALEYLH K +IH +LK NILL+++ + ++D+G + +++ R
Sbjct: 139 AE-IVSALEYLHGK-------GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
Query: 436 ------MISYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
Y SPE + K + SD+W+ GC++ +L+ G
Sbjct: 191 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 21/160 (13%)
Query: 317 VIADQKHPNLLPLLAYYFSNDEKLLV-YKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLV 375
V++ HP + L + F +DEKL +A NG L I S C +R
Sbjct: 85 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----C-TRFYT 138
Query: 376 ARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR 435
A + ALEYLH K +IH +LK NILL+++ + ++D+G + +++ R
Sbjct: 139 AE-IVSALEYLHGK-------GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
Query: 436 ------MISYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
Y SPE + K + SD+W+ GC++ +L+ G
Sbjct: 191 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 21/160 (13%)
Query: 317 VIADQKHPNLLPLLAYYFSNDEKLLV-YKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLV 375
V++ HP + L + F +DEKL +A NG L I S C +R
Sbjct: 60 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----C-TRFYT 113
Query: 376 ARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR 435
A V+ ALEYLH K +IH +LK NILL+++ + ++D+G + +++ R
Sbjct: 114 AEIVS-ALEYLHGK-------GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 165
Query: 436 ------MISYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
Y SPE + K + SD+W+ GC++ +L+ G
Sbjct: 166 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 21/160 (13%)
Query: 317 VIADQKHPNLLPLLAYYFSNDEKLLV-YKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLV 375
V++ HP + L + F +DEKL +A NG L I S C +R
Sbjct: 83 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----C-TRFYT 136
Query: 376 ARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR 435
A + ALEYLH K +IH +LK NILL+++ + ++D+G + +++ R
Sbjct: 137 AE-IVSALEYLHGK-------GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 188
Query: 436 ------MISYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
Y SPE + K + SD+W+ GC++ +L+ G
Sbjct: 189 ANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 21/160 (13%)
Query: 317 VIADQKHPNLLPLLAYYFSNDEKLLV-YKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLV 375
V++ HP + L + F +DEKL +A NG L I S C +R
Sbjct: 61 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----C-TRFYT 114
Query: 376 ARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR 435
A V+ ALEYLH K +IH +LK NILL+++ + ++D+G + +++ R
Sbjct: 115 AEIVS-ALEYLHGK-------GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 166
Query: 436 ------MISYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
Y SPE + K + SD+W+ GC++ +L+ G
Sbjct: 167 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 21/160 (13%)
Query: 317 VIADQKHPNLLPLLAYYFSNDEKLLV-YKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLV 375
V++ HP + L + F +DEKL +A NG L I S C +R
Sbjct: 86 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----C-TRFYT 139
Query: 376 ARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR 435
A + ALEYLH K +IH +LK NILL+++ + ++D+G + +++ R
Sbjct: 140 AE-IVSALEYLHGK-------GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 191
Query: 436 ------MISYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
Y SPE + K + SD+W+ GC++ +L+ G
Sbjct: 192 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 21/160 (13%)
Query: 317 VIADQKHPNLLPLLAYYFSNDEKLLV-YKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLV 375
V++ HP + L + F +DEKL +A NG L I S C +R
Sbjct: 85 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----C-TRFYT 138
Query: 376 ARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR 435
A + ALEYLH K +IH +LK NILL+++ + ++D+G + +++ R
Sbjct: 139 AE-IVSALEYLHGK-------GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 190
Query: 436 ------MISYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
Y SPE + K + SD+W+ GC++ +L+ G
Sbjct: 191 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 21/160 (13%)
Query: 317 VIADQKHPNLLPLLAYYFSNDEKLLV-YKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLV 375
V++ HP + L + F +DEKL +A NG L I S +R
Sbjct: 90 VMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYT 143
Query: 376 ARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR 435
A + ALEYLH K +IH +LK NILL+++ + ++D+G + +++ R
Sbjct: 144 AE-IVSALEYLHGK-------GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 195
Query: 436 ------MISYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
Y SPE + K + SD+W+ GC++ +L+ G
Sbjct: 196 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 21/160 (13%)
Query: 317 VIADQKHPNLLPLLAYYFSNDEKLLV-YKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLV 375
V++ HP + L + F +DEKL +A NG L I S C +R
Sbjct: 83 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----C-TRFYT 136
Query: 376 ARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR 435
A + ALEYLH K +IH +LK NILL+++ + ++D+G + +++ R
Sbjct: 137 AE-IVSALEYLHGK-------GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 188
Query: 436 ------MISYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
Y SPE + K + SD+W+ GC++ +L+ G
Sbjct: 189 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 21/160 (13%)
Query: 317 VIADQKHPNLLPLLAYYFSNDEKLLV-YKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLV 375
V++ HP + L + F +DEKL +A NG L I S C +R
Sbjct: 88 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----C-TRFYT 141
Query: 376 ARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR 435
A + ALEYLH K +IH +LK NILL+++ + ++D+G + +++ R
Sbjct: 142 AE-IVSALEYLHGK-------GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 193
Query: 436 ------MISYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
Y SPE + K + SD+W+ GC++ +L+ G
Sbjct: 194 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 21/160 (13%)
Query: 317 VIADQKHPNLLPLLAYYFSNDEKLLV-YKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLV 375
V++ HP + L + F +DEKL +A NG L I S C +R
Sbjct: 67 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----C-TRFYT 120
Query: 376 ARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR 435
A + ALEYLH K +IH +LK NILL+++ + ++D+G + +++ R
Sbjct: 121 AE-IVSALEYLHGK-------GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 172
Query: 436 ------MISYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
Y SPE + K + SD+W+ GC++ +L+ G
Sbjct: 173 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 33/210 (15%)
Query: 276 LGKGIFG----------NSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPN 325
LGKG FG Y A+ R V++ + ++ +TE V+ + +HP
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAK-DEVAHTVTES-----RVLQNTRHPF 66
Query: 326 LLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
L L + ++D V ++A G LF + S+ R+ R+R A V+ ALEY
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVS-ALEY 120
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI----SYKS 441
LH +D V++ ++K N++LD + + ++D+G A + Y +
Sbjct: 121 LHSRD-------VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLA 173
Query: 442 PEYQSSKKISRKSDVWSFGCLLLELLTGRI 471
PE R D W G ++ E++ GR+
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 203
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 33/210 (15%)
Query: 276 LGKGIFG----------NSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPN 325
LGKG FG Y A+ R V++ + ++ +TE V+ + +HP
Sbjct: 18 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAK-DEVAHTVTES-----RVLQNTRHPF 71
Query: 326 LLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
L L + ++D V ++A G LF + S+ R+ R+R A + ALEY
Sbjct: 72 LTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAE-IVSALEY 125
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI----SYKS 441
LH +D V++ ++K N++LD + + ++D+G A + Y +
Sbjct: 126 LHSRD-------VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLA 178
Query: 442 PEYQSSKKISRKSDVWSFGCLLLELLTGRI 471
PE R D W G ++ E++ GR+
Sbjct: 179 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 208
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 140/319 (43%), Gaps = 63/319 (19%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKR-----LRDLKPLITEEFRKQLL----VIADQKHPNL 326
+G G FG + GR + K+ ++ LK TE+ R+ L ++ HPN+
Sbjct: 53 VGAGEFGE----VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 108
Query: 327 LPLLAYYFSNDEKLLVYKFAGNGNL--FNRIHGGKSSKNRIPFRCRSRLLVARGVARALE 384
+ L + ++V + NG+L F R H + F + + RG+A ++
Sbjct: 109 IRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ-------FTVIQLVGMLRGIASGMK 161
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ-PIAAQRM------I 437
YL + +H +L + NIL++ N + VSD+G S ++ P AA I
Sbjct: 162 YL-------SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 438 SYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQG-INGADLCSWVLRAVREE 496
+ SPE + +K + SDVWS+G +L E++ S P ++ D V++AV E
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVM----SYGERPYWEMSNQD----VIKAVDEG 266
Query: 497 WTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE-IIK------- 548
+ + AA L Q+ + C K RP+ ++VS L+ +I+
Sbjct: 267 -----YRLPPPMDCPAA-----LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKI 316
Query: 549 VTESTEEEEDFWLDQSLTD 567
+T + + LDQS D
Sbjct: 317 ITSAAARPSNLLLDQSNVD 335
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 21/160 (13%)
Query: 317 VIADQKHPNLLPLLAYYFSNDEKLLV-YKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLV 375
V++ HP + L + F +DEKL +A NG L I S C +R
Sbjct: 82 VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----C-TRFYT 135
Query: 376 ARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR 435
A + ALEYLH K +IH +LK NILL+++ + ++D+G + +++ R
Sbjct: 136 AE-IVSALEYLHGK-------GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 187
Query: 436 ------MISYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
Y SPE + K + SD+W+ GC++ +L+ G
Sbjct: 188 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 113/256 (44%), Gaps = 55/256 (21%)
Query: 257 DEQP--AGFKLNDLLKAPAEGLGKGIFGNSYKA--LLEGRAPVVVKRL--RDLKPLITEE 310
DEQP ++L + +GKG F A +L GR V VK + L P ++
Sbjct: 9 DEQPHIGNYRLQ-------KTIGKGNFAKVKLARHVLTGRE-VAVKIIDKTQLNPTSLQK 60
Query: 311 FRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRI--HGGKSSKNRIPFR 368
+++ ++ HPN++ L + LV ++A G +F+ + HG K
Sbjct: 61 LFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE----- 115
Query: 369 CRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS---- 424
R++ R + A++Y H Q ++H +LK+ N+LLD + + ++D+GFS
Sbjct: 116 ARAKF---RQIVSAVQYCH-------QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFT 165
Query: 425 ------SLVAQPIAAQRMISYKSPE-YQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP 477
+ P Y +PE +Q K + DVWS G +L L++G S P
Sbjct: 166 VGNKLDTFCGSP-------PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLP 213
Query: 478 -QGINGADLCSWVLRA 492
G N +L VLR
Sbjct: 214 FDGQNLKELRERVLRG 229
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 27/204 (13%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDL------KPLITEEFRKQLLVIADQKHPNLLPL 329
LGKG FGN Y L R + L+ L K + + R+++ + + +HPN+L L
Sbjct: 20 LGKGKFGNVY--LARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
Y+ L+ ++A G ++ + K S+ F + +A AL Y H K
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRELQ--KLSR----FDEQRTATYITELANALSYCHSK 131
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPEYQ 445
VIH ++K N+LL N + ++D+G+S V P + + + Y PE
Sbjct: 132 -------RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMI 182
Query: 446 SSKKISRKSDVWSFGCLLLELLTG 469
+ K D+WS G L E L G
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 116/249 (46%), Gaps = 41/249 (16%)
Query: 257 DEQP--AGFKLNDLLKAPAEGLGKGIFGNSYKA--LLEGRAPVVVKRL--RDLKPLITEE 310
DEQP ++L LK +GKG F A +L GR V +K + L P ++
Sbjct: 9 DEQPHIGNYRL---LKT----IGKGNFAKVKLARHILTGRE-VAIKIIDKTQLNPTSLQK 60
Query: 311 FRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRI--HGGKSSKNRIPFR 368
+++ ++ HPN++ L + L+ ++A G +F+ + HG K
Sbjct: 61 LFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKE----- 115
Query: 369 CRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS---S 425
RS+ R + A++Y H Q ++H +LK+ N+LLD + + ++D+GFS +
Sbjct: 116 ARSKF---RQIVSAVQYCH-------QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT 165
Query: 426 LVAQPIAAQRMISYKSPE-YQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP-QGINGA 483
+ + A Y +PE +Q K + DVWS G +L L++G S P G N
Sbjct: 166 VGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFDGQNLK 220
Query: 484 DLCSWVLRA 492
+L VLR
Sbjct: 221 ELRERVLRG 229
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 140/319 (43%), Gaps = 63/319 (19%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKR-----LRDLKPLITEEFRKQLL----VIADQKHPNL 326
+G G FG + GR + K+ ++ LK TE+ R+ L ++ HPN+
Sbjct: 24 VGAGEFGE----VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 79
Query: 327 LPLLAYYFSNDEKLLVYKFAGNGNL--FNRIHGGKSSKNRIPFRCRSRLLVARGVARALE 384
+ L + ++V + NG+L F R H + F + + RG+A ++
Sbjct: 80 IRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ-------FTVIQLVGMLRGIASGMK 132
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ-PIAAQRM------I 437
YL + +H +L + NIL++ N + VSD+G S ++ P AA I
Sbjct: 133 YL-------SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 185
Query: 438 SYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQG-INGADLCSWVLRAVREE 496
+ SPE + +K + SDVWS+G +L E++ S P ++ D V++AV E
Sbjct: 186 RWTSPEAIAYRKFTSASDVWSYGIVLWEVM----SYGERPYWEMSNQD----VIKAVDEG 237
Query: 497 WTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE-IIK------- 548
+ + AA L Q+ + C K RP+ ++VS L+ +I+
Sbjct: 238 -----YRLPPPMDCPAA-----LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKI 287
Query: 549 VTESTEEEEDFWLDQSLTD 567
+T + + LDQS D
Sbjct: 288 ITSAAARPSNLLLDQSNVD 306
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 33/210 (15%)
Query: 276 LGKGIFG----------NSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPN 325
LGKG FG Y A+ R V++ + ++ +TE V+ + +HP
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAK-DEVAHTVTES-----RVLQNTRHPF 66
Query: 326 LLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
L L + ++D V ++A G LF + S+ R+ R+R A + ALEY
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAE-IVSALEY 120
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI----SYKS 441
LH +D V++ ++K N++LD + + ++D+G A + Y +
Sbjct: 121 LHSRD-------VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLA 173
Query: 442 PEYQSSKKISRKSDVWSFGCLLLELLTGRI 471
PE R D W G ++ E++ GR+
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 203
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 103/224 (45%), Gaps = 38/224 (16%)
Query: 276 LGKGIFGNSYKALLEGRAP------VVVKRLRDLKPL-ITEEFRKQLLVIADQKHPNLLP 328
+G+G FG ++A G P V VK L++ + +F+++ ++A+ +PN++
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 329 LLAYYFSNDEKLLVYKFAGNGNL--FNRI----------HGGKSSKNRI------PFRCR 370
LL L++++ G+L F R H S++ R+ P C
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 371 SRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP 430
+L +AR VA + YL ++ +H +L + N L+ +N +V ++D+G S +
Sbjct: 175 EQLCIARQVAAGMAYL-------SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA 227
Query: 431 IAAQR------MISYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
+ I + PE + + +SDVW++G +L E+ +
Sbjct: 228 DYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 33/210 (15%)
Query: 276 LGKGIFG----------NSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPN 325
LGKG FG Y A+ R V++ + ++ +TE V+ + +HP
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAK-DEVAHTVTES-----RVLQNTRHPF 66
Query: 326 LLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
L L + ++D V ++A G LF + S+ R+ R+R A V+ ALEY
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVS-ALEY 120
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI----SYKS 441
LH +D V++ ++K N++LD + + ++D+G A + Y +
Sbjct: 121 LHSRD-------VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLA 173
Query: 442 PEYQSSKKISRKSDVWSFGCLLLELLTGRI 471
PE R D W G ++ E++ GR+
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 203
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 276 LGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
LGKG FGN Y A + A V+ + + K + + R+++ + + +HPN+L L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
Y+ L+ ++A G ++ + K SK F + +A AL Y H K
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQ--KLSK----FDEQRTATYITELANALSYCHSK-- 132
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPEYQSS 447
VIH ++K N+LL + ++D+G+S V P + + + Y PE
Sbjct: 133 -----RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 185
Query: 448 KKISRKSDVWSFGCLLLELLTGR 470
+ K D+WS G L E L G+
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 17/220 (7%)
Query: 261 AGFKLNDLLKAPAEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIAD 320
+G+ LN + +GKG FG+ G V VK +++ + F + V+
Sbjct: 186 SGWALNMKELKLLQTIGKGEFGDVMLGDYRGNK-VAVKCIKN--DATAQAFLAEASVMTQ 242
Query: 321 QKHPNLLPLLAYYFSNDEKL-LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGV 379
+H NL+ LL L +V ++ G+L + + S+ R L + V
Sbjct: 243 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR----SRGRSVLGGDCLLKFSLDV 298
Query: 380 ARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-IS 438
A+EYL + +H +L + N+L+ ++ + VSD+G + + ++ +
Sbjct: 299 CEAMEYLEGNN-------FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK 351
Query: 439 YKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAP 477
+ +PE KK S KSDVWSFG LL E+ + GR+ P
Sbjct: 352 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 391
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 33/210 (15%)
Query: 276 LGKGIFG----------NSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPN 325
LGKG FG Y A+ R V++ + ++ +TE V+ + +HP
Sbjct: 16 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAK-DEVAHTVTES-----RVLQNTRHPF 69
Query: 326 LLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
L L + ++D V ++A G LF + S+ R+ R+R A V+ ALEY
Sbjct: 70 LTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVS-ALEY 123
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI----SYKS 441
LH +D V++ ++K N++LD + + ++D+G A + Y +
Sbjct: 124 LHSRD-------VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLA 176
Query: 442 PEYQSSKKISRKSDVWSFGCLLLELLTGRI 471
PE R D W G ++ E++ GR+
Sbjct: 177 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 206
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 27/204 (13%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDL------KPLITEEFRKQLLVIADQKHPNLLPL 329
LGKG FGN Y L R + L+ L K + + R+++ + + +HPN+L L
Sbjct: 20 LGKGKFGNVY--LARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
Y+ L+ ++A G ++ + K S+ F + +A AL Y H K
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRELQ--KLSR----FDEQRTATYITELANALSYCHSK 131
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPEYQ 445
VIH ++K N+LL N + ++D+G+S V P + + + Y PE
Sbjct: 132 -------RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMI 182
Query: 446 SSKKISRKSDVWSFGCLLLELLTG 469
+ K D+WS G L E L G
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 276 LGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
LGKG FGN Y A + A V+ + + K + + R+++ + + +HPN+L L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
Y+ L+ ++A G ++ + K SK F + +A AL Y H K
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQ--KLSK----FDEQRTATYITELANALSYCHSK-- 132
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPEYQSS 447
VIH ++K N+LL + ++D+G+S V P + + + Y PE
Sbjct: 133 -----RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLXGTLDYLPPEMIEG 185
Query: 448 KKISRKSDVWSFGCLLLELLTGR 470
+ K D+WS G L E L G+
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 41/280 (14%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYY 333
E LG G FG + G V VK L+ + + F + ++ +H L+ L A
Sbjct: 15 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV- 72
Query: 334 FSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSR 393
+ + ++ ++ NG+L + + + + I L +A +A + ++ ++
Sbjct: 73 VTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIEERN--- 125
Query: 394 TQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV-----AQPIAAQRMISYKSPEYQSSK 448
IH NL++ NIL+ D ++D+G + L+ A+ I + +PE +
Sbjct: 126 ----YIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG 181
Query: 449 KISRKSDVWSFGCLLLELLT-GRI--STHSAPQGINGADLCSWVLRAVREEWTAEIFDSE 505
+ KSDVWSFG LL E++T GRI + P+ I + R VR + E
Sbjct: 182 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG---YRMVRPDNCPE----- 233
Query: 506 ISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
+L Q+ C + PE RP + S LE
Sbjct: 234 ------------ELYQLMRLCWKERPEDRPTFDYLRSVLE 261
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 33/210 (15%)
Query: 276 LGKGIFG----------NSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPN 325
LGKG FG Y A+ R V++ + ++ +TE V+ + +HP
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAK-DEVAHTVTES-----RVLQNTRHPF 66
Query: 326 LLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
L L + ++D V ++A G LF + S+ R+ R+R A V+ ALEY
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVS-ALEY 120
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI----SYKS 441
LH +D V++ ++K N++LD + + ++D+G A + Y +
Sbjct: 121 LHSRD-------VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLA 173
Query: 442 PEYQSSKKISRKSDVWSFGCLLLELLTGRI 471
PE R D W G ++ E++ GR+
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 203
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 33/210 (15%)
Query: 276 LGKGIFG----------NSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPN 325
LGKG FG Y A+ R V++ + ++ +TE V+ + +HP
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAK-DEVAHTVTES-----RVLQNTRHPF 66
Query: 326 LLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
L L + ++D V ++A G LF + S+ R+ R+R A V+ ALEY
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVS-ALEY 120
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI----SYKS 441
LH +D V++ ++K N++LD + + ++D+G A + Y +
Sbjct: 121 LHSRD-------VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLA 173
Query: 442 PEYQSSKKISRKSDVWSFGCLLLELLTGRI 471
PE R D W G ++ E++ GR+
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 203
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 17/220 (7%)
Query: 261 AGFKLNDLLKAPAEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIAD 320
+G+ LN + +GKG FG+ G V VK +++ + F + V+
Sbjct: 14 SGWALNMKELKLLQTIGKGEFGDVMLGDYRGNK-VAVKCIKN--DATAQAFLAEASVMTQ 70
Query: 321 QKHPNLLPLLAYYFSNDEKL-LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGV 379
+H NL+ LL L +V ++ G+L + + S+ R L + V
Sbjct: 71 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR----SRGRSVLGGDCLLKFSLDV 126
Query: 380 ARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-IS 438
A+EYL + +H +L + N+L+ ++ + VSD+G + + ++ +
Sbjct: 127 CEAMEYLEGNN-------FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK 179
Query: 439 YKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAP 477
+ +PE KK S KSDVWSFG LL E+ + GR+ P
Sbjct: 180 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 219
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 99/212 (46%), Gaps = 26/212 (12%)
Query: 276 LGKGIFGNSYKALLEGRAP------VVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPL 329
LG+G FG + A P V VK L+D ++F ++ ++ + +H +++
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 330 LAYYFSNDEKLLVYKFAGNGNL--FNRIHGGKS---SKNRIPFR-CRSRLL-VARGVARA 382
D ++V+++ +G+L F R HG + ++ P +S++L +A+ +A
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP----IAAQRM-- 436
+ YL +H +L + N L+ +N +V + D+G S V + M
Sbjct: 141 MVYL-------ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 193
Query: 437 ISYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
I + PE +K + +SDVWS G +L E+ T
Sbjct: 194 IRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 104/237 (43%), Gaps = 28/237 (11%)
Query: 255 IEDEQPAGFKLNDLLKAPAEGLGKGIFGN----SYKALLEGRAPVV-VKRLRDLKPLITE 309
ED P F+ L + LGKG FG+ Y L + VV VK+L+
Sbjct: 30 FEDRDPTQFEERHL--KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 87
Query: 310 EFRKQLLVIADQKHPNLLPLLAYYFSNDEK--LLVYKFAGNGNLFNRIHGGKSSKNRIPF 367
+F +++ ++ +H N++ +S + L+ ++ G+L + + K + I
Sbjct: 88 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 147
Query: 368 RCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV 427
L + + +EYL K IH +L + NIL+++ V + D+G + ++
Sbjct: 148 -----LQYTSQICKGMEYLGTK-------RYIHRDLATRNILVENENRVKIGDFGLTKVL 195
Query: 428 AQPIAAQRM-------ISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP 477
Q ++ I + +PE + K S SDVWSFG +L EL T + S P
Sbjct: 196 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP 252
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 19/201 (9%)
Query: 276 LGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
LGKG FGN Y A + A V+ + + K + + R+++ + + +HPN+L L
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
Y+ + L+ ++A G ++ + K SK F + +A AL Y H K
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQ--KLSK----FDEQRTATYITELANALSYCHSKK- 128
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS--SLVAQPIAAQRMISYKSPEYQSSKK 449
VIH ++K N+LL + ++D+G+S + ++ A + Y PE +
Sbjct: 129 ------VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRM 182
Query: 450 ISRKSDVWSFGCLLLELLTGR 470
K D+WS G L E L G+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGK 203
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 104/237 (43%), Gaps = 28/237 (11%)
Query: 255 IEDEQPAGFKLNDLLKAPAEGLGKGIFGN----SYKALLEGRAPVV-VKRLRDLKPLITE 309
ED P F+ L + LGKG FG+ Y L + VV VK+L+
Sbjct: 6 FEDRDPTQFEERHL--KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 63
Query: 310 EFRKQLLVIADQKHPNLLPLLAYYFSNDEK--LLVYKFAGNGNLFNRIHGGKSSKNRIPF 367
+F +++ ++ +H N++ +S + L+ ++ G+L + + K + I
Sbjct: 64 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 123
Query: 368 RCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV 427
L + + +EYL K IH +L + NIL+++ V + D+G + ++
Sbjct: 124 -----LQYTSQICKGMEYLGTK-------RYIHRDLATRNILVENENRVKIGDFGLTKVL 171
Query: 428 AQPIAAQRM-------ISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP 477
Q ++ I + +PE + K S SDVWSFG +L EL T + S P
Sbjct: 172 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP 228
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 104/237 (43%), Gaps = 28/237 (11%)
Query: 255 IEDEQPAGFKLNDLLKAPAEGLGKGIFGN----SYKALLEGRAPVV-VKRLRDLKPLITE 309
ED P F+ L + LGKG FG+ Y L + VV VK+L+
Sbjct: 4 FEDRDPTQFEERHL--KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 61
Query: 310 EFRKQLLVIADQKHPNLLPLLAYYFSNDEK--LLVYKFAGNGNLFNRIHGGKSSKNRIPF 367
+F +++ ++ +H N++ +S + L+ ++ G+L + + K + I
Sbjct: 62 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 121
Query: 368 RCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV 427
L + + +EYL K IH +L + NIL+++ V + D+G + ++
Sbjct: 122 -----LQYTSQICKGMEYLGTK-------RYIHRDLATRNILVENENRVKIGDFGLTKVL 169
Query: 428 AQPIAAQRM-------ISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP 477
Q ++ I + +PE + K S SDVWSFG +L EL T + S P
Sbjct: 170 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP 226
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 104/237 (43%), Gaps = 28/237 (11%)
Query: 255 IEDEQPAGFKLNDLLKAPAEGLGKGIFGN----SYKALLEGRAPVV-VKRLRDLKPLITE 309
ED P F+ L + LGKG FG+ Y L + VV VK+L+
Sbjct: 5 FEDRDPTQFEERHL--KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 62
Query: 310 EFRKQLLVIADQKHPNLLPLLAYYFSNDEK--LLVYKFAGNGNLFNRIHGGKSSKNRIPF 367
+F +++ ++ +H N++ +S + L+ ++ G+L + + K + I
Sbjct: 63 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 122
Query: 368 RCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV 427
L + + +EYL K IH +L + NIL+++ V + D+G + ++
Sbjct: 123 -----LQYTSQICKGMEYLGTK-------RYIHRDLATRNILVENENRVKIGDFGLTKVL 170
Query: 428 AQPIAAQRM-------ISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP 477
Q ++ I + +PE + K S SDVWSFG +L EL T + S P
Sbjct: 171 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP 227
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 126/286 (44%), Gaps = 49/286 (17%)
Query: 276 LGKGIFGN--SYKALLEGRA--PVVVKRLRDLKPLITEEFRKQLL----VIADQKHPNLL 327
+G G FG S + L G+ PV +K LK TE+ R+ L ++ HPN++
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIK---TLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
L + ++V ++ NG+L + KN F + + RG++ ++YL
Sbjct: 87 HLEGVVTKSKPVMIVTEYMENGSLDTFL-----KKNDGQFTVIQLVGMLRGISAGMKYL- 140
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ-PIAAQRM------ISYK 440
+ +H +L + NIL++ N + VSD+G S ++ P AA I +
Sbjct: 141 ------SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 194
Query: 441 SPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQG-INGADLCSWVLRAVREEWTA 499
+PE + +K + SDVWS+G ++ E+ +S P + D V++AV E +
Sbjct: 195 APEAIAFRKFTSASDVWSYGIVMWEV----VSYGERPYWEMTNQD----VIKAVEEGYRL 246
Query: 500 EIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
S L Q+ + C K RP+ E+V+ L+
Sbjct: 247 P----------SPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLD 282
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 104/237 (43%), Gaps = 28/237 (11%)
Query: 255 IEDEQPAGFKLNDLLKAPAEGLGKGIFGN----SYKALLEGRAPVV-VKRLRDLKPLITE 309
ED P F+ L + LGKG FG+ Y L + VV VK+L+
Sbjct: 3 FEDRDPTQFEERHL--KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 60
Query: 310 EFRKQLLVIADQKHPNLLPLLAYYFSNDEK--LLVYKFAGNGNLFNRIHGGKSSKNRIPF 367
+F +++ ++ +H N++ +S + L+ ++ G+L + + K + I
Sbjct: 61 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 120
Query: 368 RCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV 427
L + + +EYL K IH +L + NIL+++ V + D+G + ++
Sbjct: 121 -----LQYTSQICKGMEYLGTK-------RYIHRDLATRNILVENENRVKIGDFGLTKVL 168
Query: 428 AQPIAAQRM-------ISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP 477
Q ++ I + +PE + K S SDVWSFG +L EL T + S P
Sbjct: 169 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP 225
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 28/236 (11%)
Query: 256 EDEQPAGFKLNDLLKAPAEGLGKGIFGN----SYKALLEGRAPVV-VKRLRDLKPLITEE 310
ED P F+ L + LGKG FG+ Y L + VV VK+L+ +
Sbjct: 3 EDRDPTQFEERHL--KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 60
Query: 311 FRKQLLVIADQKHPNLLPLLAYYFSNDEK--LLVYKFAGNGNLFNRIHGGKSSKNRIPFR 368
F +++ ++ +H N++ +S + L+ ++ G+L + + K + I
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL- 119
Query: 369 CRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428
L + + +EYL K IH +L + NIL+++ V + D+G + ++
Sbjct: 120 ----LQYTSQICKGMEYLGTK-------RYIHRDLATRNILVENENRVKIGDFGLTKVLP 168
Query: 429 QPIAAQRM-------ISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP 477
Q ++ I + +PE + K S SDVWSFG +L EL T + S P
Sbjct: 169 QDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP 224
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 102/212 (48%), Gaps = 32/212 (15%)
Query: 274 EGLGKGIFGNSYKALLE--GRAPVVVKRLRDLKPLITEEFRKQLL----VIADQKHPNLL 327
E +G G FG + L+ G+ V ++ LK TE R++ L ++ +HPN++
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVA-IKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNL--FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
L ++ +++ +F NG L F R++ G+ F + + RG+A + Y
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ-------FTVIQLVGMLRGIASGMRY 131
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ---------PIAAQRM 436
L + + +H +L + NIL++ N + VSD+G S + + + +
Sbjct: 132 L-------AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIP 184
Query: 437 ISYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
I + +PE + +K + SD WS+G ++ E+++
Sbjct: 185 IRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 102/237 (43%), Gaps = 28/237 (11%)
Query: 255 IEDEQPAGFKLNDLLKAPAEGLGKGIFGN----SYKALLEGRAPVV-VKRLRDLKPLITE 309
ED P F+ L LGKG FG+ Y L + VV VK+L+
Sbjct: 2 FEDRDPTQFEERHL--KFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 59
Query: 310 EFRKQLLVIADQKHPNLLPLLAYYFSNDEK--LLVYKFAGNGNLFNRIHGGKSSKNRIPF 367
+F +++ ++ +H N++ +S + L+ +F G+L + K + I
Sbjct: 60 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKL 119
Query: 368 RCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV 427
L + + +EYL K IH +L + NIL+++ V + D+G + ++
Sbjct: 120 -----LQYTSQICKGMEYLGTK-------RYIHRDLATRNILVENENRVKIGDFGLTKVL 167
Query: 428 AQPIAAQRM-------ISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP 477
Q ++ I + +PE + K S SDVWSFG +L EL T + S P
Sbjct: 168 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP 224
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 17/205 (8%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
+GKG FG+ G V VK +++ + F + V+ +H NL+ LL
Sbjct: 14 IGKGEFGDVMLGDYRGNK-VAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 336 NDEKL-LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRT 394
L +V ++ G+L + + S+ R L + V A+EYL +
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLR----SRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---- 122
Query: 395 QSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-ISYKSPEYQSSKKISRK 453
+H +L + N+L+ ++ + VSD+G + + ++ + + +PE KK S K
Sbjct: 123 ---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTK 179
Query: 454 SDVWSFGCLLLELLT-GRISTHSAP 477
SDVWSFG LL E+ + GR+ P
Sbjct: 180 SDVWSFGILLWEIYSFGRVPYPRIP 204
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 102/212 (48%), Gaps = 32/212 (15%)
Query: 274 EGLGKGIFGNSYKALLE--GRAPVVVKRLRDLKPLITEEFRKQLL----VIADQKHPNLL 327
E +G G FG + L+ G+ V ++ LK TE R++ L ++ +HPN++
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCVA-IKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNL--FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
L ++ +++ +F NG L F R++ G+ F + + RG+A + Y
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ-------FTVIQLVGMLRGIASGMRY 133
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ---------PIAAQRM 436
L + + +H +L + NIL++ N + VSD+G S + + + +
Sbjct: 134 L-------AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIP 186
Query: 437 ISYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
I + +PE + +K + SD WS+G ++ E+++
Sbjct: 187 IRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 274 EGLGKGIFGNSY--KALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
E LG G F + K L G+ +K ++ ++ V+ KH N++ L
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKL-FALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLED 73
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
Y S LV + G LF+RI R + + LV + V A++YLH
Sbjct: 74 IYESTTHYYLVMQLVSGGELFDRI------LERGVYTEKDASLVIQQVLSAVKYLH---- 123
Query: 392 SRTQSAVIHGNLKSTNILL---DDNEMVLVSDYGFSSLVAQPI--AAQRMISYKSPEYQS 446
++ ++H +LK N+L ++N ++++D+G S + I A Y +PE +
Sbjct: 124 ---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLA 180
Query: 447 SKKISRKSDVWSFGCLLLELLTG 469
K S+ D WS G + LL G
Sbjct: 181 QKPYSKAVDCWSIGVITYILLCG 203
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 104/221 (47%), Gaps = 17/221 (7%)
Query: 254 FIEDEQPAGFKLNDLLKAPAEGLGKGIFGNSYKALLEGRAPVVVKRL--RDLKPLITEEF 311
F+ +Q G +D + +E LG G G +K + V+ ++L ++KP I +
Sbjct: 20 FLTQKQKVGELKDDDFEKISE-LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI 78
Query: 312 RKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRS 371
++L V+ + P ++ ++S+ E + + G+L + RIP +
Sbjct: 79 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILG 134
Query: 372 RLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI 431
++ +A V + L YL K K ++H ++K +NIL++ + + D+G S + +
Sbjct: 135 KVSIA--VIKGLTYLREKHK------IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 186
Query: 432 AAQRM--ISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGR 470
A + SY SPE S +SD+WS G L+E+ GR
Sbjct: 187 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 276 LGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
LGKG FGN Y A + A V+ + + K + + R+++ + + +HPN+L L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
Y+ L+ ++A G ++ + K SK F + +A AL Y H K
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQ--KLSK----FDEQRTATYITELANALSYCHSK-- 153
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPEYQSS 447
VIH ++K N+LL + ++D+G+S V P + + + Y PE
Sbjct: 154 -----RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 206
Query: 448 KKISRKSDVWSFGCLLLELLTGR 470
+ K D+WS G L E L G+
Sbjct: 207 RMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 276 LGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
LGKG FGN Y A + A V+ + + K + + R+++ + + +HPN+L L
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
Y+ L+ ++A G ++ + K SK F + +A AL Y H K
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQ--KLSK----FDEQRTATYITELANALSYCHSK-- 144
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPEYQSS 447
VIH ++K N+LL + ++D+G+S V P + + + Y PE
Sbjct: 145 -----RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 197
Query: 448 KKISRKSDVWSFGCLLLELLTGR 470
+ K D+WS G L E L G+
Sbjct: 198 RMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 276 LGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
LGKG FGN Y A + A V+ + + K + + R+++ + + +HPN+L L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
Y+ L+ ++A G ++ + K SK F + +A AL Y H K
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQ--KLSK----FDEQRTATYITELANALSYCHSK-- 132
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPEYQSS 447
VIH ++K N+LL + ++D+G+S V P + + + Y PE
Sbjct: 133 -----RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEXIEG 185
Query: 448 KKISRKSDVWSFGCLLLELLTGR 470
+ K D+WS G L E L G+
Sbjct: 186 RXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 253 VFIEDEQPAGFKLNDLLKAPAEGLGKGIFGNSYKALLEGRAPVVVKRL--RDLKPLITEE 310
F+ +Q G +D + +E LG G G +K + V+ ++L ++KP I +
Sbjct: 54 AFLTQKQKVGELKDDDFEKISE-LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ 112
Query: 311 FRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCR 370
++L V+ + P ++ ++S+ E + + G+L + RIP +
Sbjct: 113 IIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQIL 168
Query: 371 SRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP 430
++ +A V + L YL K K ++H ++K +NIL++ + + D+G S +
Sbjct: 169 GKVSIA--VIKGLTYLREKHK------IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 220
Query: 431 IAAQRM--ISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGR 470
+A + SY SPE S +SD+WS G L+E+ GR
Sbjct: 221 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 92/180 (51%), Gaps = 20/180 (11%)
Query: 295 VVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNR 354
V VK++ K E +++++ D +H N++ + Y DE +V +F G L +
Sbjct: 48 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 107
Query: 355 IHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNE 414
+ + ++ +I C + V +AL LH + VIH ++KS +ILL +
Sbjct: 108 VTHTRMNEEQIAAVCLA-------VLQALSVLHAQ-------GVIHRDIKSDSILLTHDG 153
Query: 415 MVLVSDYGFSSLVAQPIAAQRMISYKSPEYQSSKKISR-----KSDVWSFGCLLLELLTG 469
V +SD+GF + V++ + ++ + +P + + + ISR + D+WS G +++E++ G
Sbjct: 154 RVKLSDFGFCAQVSKEVPRRKXL-VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 212
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 276 LGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
LGKG FGN Y A + A V+ + + K + + R+++ + + +HPN+L L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
Y+ L+ ++A G ++ + K SK F + +A AL Y H K
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQ--KLSK----FDEQRTATYITELANALSYCHSKR- 131
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS--SLVAQPIAAQRMISYKSPEYQSSKK 449
VIH ++K N+LL + ++D+G+S + ++ A + Y PE +
Sbjct: 132 ------VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRM 185
Query: 450 ISRKSDVWSFGCLLLELLTGR 470
K D+WS G L E L G+
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGK 206
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 25/210 (11%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEE-----FRKQLLVIADQKHPNLLPLL 330
LGKG FGN Y A E ++ +V K I +E R+++ + A HPN+L L
Sbjct: 31 LGKGKFGNVYLAR-EKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLY 89
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
Y++ L+ ++A G L+ K + F + + +A AL Y H K
Sbjct: 90 NYFYDRRRIYLILEYAPRGELY------KELQKSCTFDEQRTATIMEELADALMYCHGKK 143
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPEYQS 446
VIH ++K N+LL + ++D+G+S V P ++ + Y PE
Sbjct: 144 -------VIHRDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKTMCGTLDYLPPEMIE 194
Query: 447 SKKISRKSDVWSFGCLLLELLTGRISTHSA 476
+ + K D+W G L ELL G SA
Sbjct: 195 GRMHNEKVDLWCIGVLCYELLVGNPPFESA 224
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 114/256 (44%), Gaps = 55/256 (21%)
Query: 257 DEQP--AGFKLNDLLKAPAEGLGKGIFGNSYKA--LLEGRAPVVVKRL--RDLKPLITEE 310
DEQP ++L LK +GKG F A +L GR V +K + L P ++
Sbjct: 6 DEQPHIGNYRL---LKT----IGKGNFAKVKLARHILTGRE-VAIKIIDKTQLNPTSLQK 57
Query: 311 FRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRI--HGGKSSKNRIPFR 368
+++ ++ HPN++ L + L+ ++A G +F+ + HG K
Sbjct: 58 LFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKE----- 112
Query: 369 CRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS---- 424
RS+ R + A++Y H Q ++H +LK+ N+LLD + + ++D+GFS
Sbjct: 113 ARSKF---RQIVSAVQYCH-------QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT 162
Query: 425 ------SLVAQPIAAQRMISYKSPE-YQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP 477
+ P Y +PE +Q K + DVWS G +L L++G S P
Sbjct: 163 VGGKLDTFCGSP-------PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLP 210
Query: 478 -QGINGADLCSWVLRA 492
G N +L VLR
Sbjct: 211 FDGQNLKELRERVLRG 226
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 120/280 (42%), Gaps = 50/280 (17%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQ----KHPNLLPL 329
E +G+G FG KA + V +K++ +E RK +V Q HPN++ L
Sbjct: 14 EVVGRGAFGVVCKAKWRAKD-VAIKQIE------SESERKAFIVELRQLSRVNHPNIVKL 66
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLL-VARGVARALEYLHH 388
Y + LV ++A G+L+N +HG + S L ++GVA YLH
Sbjct: 67 --YGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVA----YLH- 119
Query: 389 KDKSRTQSAVIHGNLKSTNILLDDNEMVL-VSDYGFSSLVAQPIAAQR-MISYKSPEYQS 446
S A+IH +LK N+LL VL + D+G + + + + ++ +PE
Sbjct: 120 ---SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFE 176
Query: 447 SKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEI 506
S K DV+S+G +L E++T R I G A R W
Sbjct: 177 GSNYSEKCDVFSWGIILWEVITRRKPFDE----IGGP--------AFRIMW--------- 215
Query: 507 SVQRSAAHGMLKLLQVAIQ-----CCNKSPEKRPEMAEVV 541
+V ++K L I+ C +K P +RP M E+V
Sbjct: 216 AVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIV 255
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 276 LGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
LGKG FGN Y A + A V+ + + K + + R+++ + + +HPN+L L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
Y+ L+ ++A G ++ + K SK F + +A AL Y H K
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQ--KLSK----FDEQRTATYITELANALSYCHSK-- 153
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPEYQSS 447
VIH ++K N+LL + ++D+G+S V P + + + Y PE
Sbjct: 154 -----RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEMIEG 206
Query: 448 KKISRKSDVWSFGCLLLELLTGR 470
+ K D+WS G L E L G+
Sbjct: 207 RMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 92/180 (51%), Gaps = 20/180 (11%)
Query: 295 VVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNR 354
V VK++ K E +++++ D +H N++ + Y DE +V +F G L +
Sbjct: 59 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 118
Query: 355 IHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNE 414
+ + ++ +I C + V +AL LH + VIH ++KS +ILL +
Sbjct: 119 VTHTRMNEEQIAAVCLA-------VLQALSVLHAQ-------GVIHRDIKSDSILLTHDG 164
Query: 415 MVLVSDYGFSSLVAQPIAAQRMISYKSPEYQSSKKISR-----KSDVWSFGCLLLELLTG 469
V +SD+GF + V++ + ++ + +P + + + ISR + D+WS G +++E++ G
Sbjct: 165 RVKLSDFGFCAQVSKEVPRRKXL-VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 223
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 276 LGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
LGKG FGN Y A + A V+ + + K + + R+++ + + +HPN+L L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
Y+ L+ ++A G ++ + K SK F + +A AL Y H K
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQ--KLSK----FDEQRTATYITELANALSYCHSK-- 129
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPEYQSS 447
VIH ++K N+LL + ++D+G+S V P + + + Y PE
Sbjct: 130 -----RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEG 182
Query: 448 KKISRKSDVWSFGCLLLELLTGR 470
+ K D+WS G L E L G+
Sbjct: 183 RMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 92/180 (51%), Gaps = 20/180 (11%)
Query: 295 VVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNR 354
V VK++ K E +++++ D +H N++ + Y DE +V +F G L +
Sbjct: 52 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 111
Query: 355 IHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNE 414
+ + ++ +I C + V +AL LH + VIH ++KS +ILL +
Sbjct: 112 VTHTRMNEEQIAAVCLA-------VLQALSVLHAQ-------GVIHRDIKSDSILLTHDG 157
Query: 415 MVLVSDYGFSSLVAQPIAAQRMISYKSPEYQSSKKISR-----KSDVWSFGCLLLELLTG 469
V +SD+GF + V++ + ++ + +P + + + ISR + D+WS G +++E++ G
Sbjct: 158 RVKLSDFGFCAQVSKEVPRRKXL-VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 216
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 276 LGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
LGKG FGN Y A + A V+ + + K + + R+++ + + +HPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
Y+ L+ ++A G ++ + K SK F + +A AL Y H K
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQ--KLSK----FDEQRTATYITELANALSYCHSK-- 127
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPEYQSS 447
VIH ++K N+LL + ++D+G+S V P + + + Y PE
Sbjct: 128 -----RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 180
Query: 448 KKISRKSDVWSFGCLLLELLTGR 470
+ K D+WS G L E L G+
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 276 LGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
LGKG FGN Y A + A V+ + + K + + R+++ + + +HPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
Y+ L+ ++A G ++ + K SK F + +A AL Y H K
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQ--KLSK----FDEQRTATYITELANALSYCHSK-- 127
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPEYQSS 447
VIH ++K N+LL + ++D+G+S V P + + + Y PE
Sbjct: 128 -----RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTELCGTLDYLPPEMIEG 180
Query: 448 KKISRKSDVWSFGCLLLELLTGR 470
+ K D+WS G L E L G+
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 276 LGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
LGKG FGN Y A + A V+ + + K + + R+++ + + +HPN+L L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
Y+ L+ ++A G ++ + K SK F + +A AL Y H K
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQ--KLSK----FDEQRTATYITELANALSYCHSK-- 128
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPEYQSS 447
VIH ++K N+LL + ++D+G+S V P + + + Y PE
Sbjct: 129 -----RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEG 181
Query: 448 KKISRKSDVWSFGCLLLELLTGR 470
+ K D+WS G L E L G+
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 32/210 (15%)
Query: 276 LGKGIFGN--SYKALLEGRAPVVVKRLRDLKPLITEEFRKQLL----VIADQKHPNLLPL 329
+G G FG S L G+ + V ++ LK TE+ R+ L ++ HPN++ L
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVA-IKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 99
Query: 330 LAYYFSNDEKLLVYKFAGNGNL--FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
+ +++ +F NG+L F R + G+ F + + RG+A ++YL
Sbjct: 100 EGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-------FTVIQLVGMLRGIAAGMKYLA 152
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV---------AQPIAAQRMIS 438
+ +H +L + NIL++ N + VSD+G S + + + I
Sbjct: 153 DMN-------YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIR 205
Query: 439 YKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
+ +PE +K + SDVWS+G ++ E+++
Sbjct: 206 WTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 276 LGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
LGKG FGN Y A + A V+ + + K + + R+++ + + +HPN+L L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
Y+ L+ ++A G ++ + K SK F + +A AL Y H K
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQ--KLSK----FDEQRTATYITELANALSYCHSK-- 132
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPEYQSS 447
VIH ++K N+LL + ++D+G+S V P + + + Y PE
Sbjct: 133 -----RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 185
Query: 448 KKISRKSDVWSFGCLLLELLTGR 470
+ K D+WS G L E L G+
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 276 LGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
LGKG FGN Y A + A V+ + + K + + R+++ + + +HPN+L L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
Y+ L+ ++A G ++ + K SK F + +A AL Y H K
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQ--KLSK----FDEQRTATYITELANALSYCHSK-- 130
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPEYQSS 447
VIH ++K N+LL + ++D+G+S V P + + + Y PE
Sbjct: 131 -----RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 183
Query: 448 KKISRKSDVWSFGCLLLELLTGR 470
+ K D+WS G L E L G+
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 102/204 (50%), Gaps = 29/204 (14%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLL-----VIADQKHPNLLPLL 330
+G+G G A + +V + DL+ ++ R++LL ++ D +H N++ +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLR----KQQRRELLFNEVVIMRDYQHENVVEMY 92
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
Y DE +V +F G L + + + ++ +I C + V +AL LH +
Sbjct: 93 NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA-------VLQALSVLHAQ- 144
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYKSPEYQSSKKI 450
VIH ++KS +ILL + V +SD+GF + V++ + ++ + +P + + + I
Sbjct: 145 ------GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL-VGTPYWMAPELI 197
Query: 451 SR-----KSDVWSFGCLLLELLTG 469
SR + D+WS G +++E++ G
Sbjct: 198 SRLPYGPEVDIWSLGIMVIEMVDG 221
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 120/280 (42%), Gaps = 50/280 (17%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQ----KHPNLLPL 329
E +G+G FG KA + V +K++ +E RK +V Q HPN++ L
Sbjct: 15 EVVGRGAFGVVCKAKWRAKD-VAIKQIE------SESERKAFIVELRQLSRVNHPNIVKL 67
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLL-VARGVARALEYLHH 388
Y + LV ++A G+L+N +HG + S L ++GVA YLH
Sbjct: 68 --YGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVA----YLH- 120
Query: 389 KDKSRTQSAVIHGNLKSTNILLDDNEMVL-VSDYGFSSLVAQPIAAQR-MISYKSPEYQS 446
S A+IH +LK N+LL VL + D+G + + + + ++ +PE
Sbjct: 121 ---SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFE 177
Query: 447 SKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEI 506
S K DV+S+G +L E++T R I G A R W
Sbjct: 178 GSNYSEKCDVFSWGIILWEVITRRKPFDE----IGGP--------AFRIMW--------- 216
Query: 507 SVQRSAAHGMLKLLQVAIQ-----CCNKSPEKRPEMAEVV 541
+V ++K L I+ C +K P +RP M E+V
Sbjct: 217 AVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIV 256
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 276 LGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
LGKG FGN Y A + A V+ + + K + + R+++ + + +HPN+L L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
Y+ L+ ++A G ++ + K SK F + +A AL Y H K
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQ--KLSK----FDEQRTATYITELANALSYCHSK-- 132
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPEYQSS 447
VIH ++K N+LL + ++D+G+S V P + + + Y PE
Sbjct: 133 -----RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEG 185
Query: 448 KKISRKSDVWSFGCLLLELLTGR 470
+ K D+WS G L E L G+
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 26/216 (12%)
Query: 276 LGKGIFGN----SYKALLEGRAPVV-VKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLL 330
LGKG FG+ Y L + VV VK+L+ +F +++ ++ +H N++
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 331 AYYFSNDEK--LLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
+S + L+ ++ G+L + + K + I L + + +EYL
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGT 133
Query: 389 KDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-------ISYKS 441
K IH NL + NIL+++ V + D+G + ++ Q ++ I + +
Sbjct: 134 K-------RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYA 186
Query: 442 PEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP 477
PE + K S SDVWSFG +L EL T + S P
Sbjct: 187 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP 222
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 89/204 (43%), Gaps = 27/204 (13%)
Query: 276 LGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
LGKG FGN Y A + A V+ + + K + + R+++ + + +HPN+L +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRI--HGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
Y+ L+ +FA G L+ + HG + F +A AL Y H
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF--------MEELADALHYCH-- 132
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM----ISYKSPEYQ 445
+ VIH ++K N+L+ + ++D+G+S V P +R + Y PE
Sbjct: 133 -----ERKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMI 185
Query: 446 SSKKISRKSDVWSFGCLLLELLTG 469
K K D+W G L E L G
Sbjct: 186 EGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 276 LGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
LGKG FGN Y A + A V+ + + K + + R+++ + + +HPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
Y+ L+ ++A G ++ + K SK F + +A AL Y H K
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQ--KLSK----FDEQRTATYITELANALSYCHSK-- 127
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPEYQSS 447
VIH ++K N+LL + ++D+G+S V P + + + Y PE
Sbjct: 128 -----RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEG 180
Query: 448 KKISRKSDVWSFGCLLLELLTGR 470
+ K D+WS G L E L G+
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 276 LGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
LGKG FGN Y A + A V+ + + K + + R+++ + + +HPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
Y+ L+ ++A G ++ + K SK F + +A AL Y H K
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQ--KLSK----FDEQRTATYITELANALSYCHSK-- 127
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPEYQSS 447
VIH ++K N+LL + ++D+G+S V P + + + Y PE
Sbjct: 128 -----RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEG 180
Query: 448 KKISRKSDVWSFGCLLLELLTGR 470
+ K D+WS G L E L G+
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 16/199 (8%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRL--RDLKPLITEEFRKQLLVIADQKHPNLLPLLAYY 333
LG G G +K + V+ ++L ++KP I + ++L V+ + P ++ +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 334 FSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSR 393
+S+ E + + G+L + RIP + ++ +A V + L YL K K
Sbjct: 74 YSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIA--VIKGLTYLREKHK-- 125
Query: 394 TQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM--ISYKSPEYQSSKKIS 451
++H ++K +NIL++ + + D+G S + +A + SY SPE S
Sbjct: 126 ----IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS 181
Query: 452 RKSDVWSFGCLLLELLTGR 470
+SD+WS G L+E+ GR
Sbjct: 182 VQSDIWSMGLSLVEMAVGR 200
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 16/199 (8%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRL--RDLKPLITEEFRKQLLVIADQKHPNLLPLLAYY 333
LG G G +K + V+ ++L ++KP I + ++L V+ + P ++ +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 334 FSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSR 393
+S+ E + + G+L + RIP + ++ +A V + L YL K K
Sbjct: 74 YSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIA--VIKGLTYLREKHK-- 125
Query: 394 TQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM--ISYKSPEYQSSKKIS 451
++H ++K +NIL++ + + D+G S + +A + SY SPE S
Sbjct: 126 ----IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS 181
Query: 452 RKSDVWSFGCLLLELLTGR 470
+SD+WS G L+E+ GR
Sbjct: 182 VQSDIWSMGLSLVEMAVGR 200
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 89/204 (43%), Gaps = 27/204 (13%)
Query: 276 LGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
LGKG FGN Y A + A V+ + + K + + R+++ + + +HPN+L +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRI--HGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
Y+ L+ +FA G L+ + HG + F +A AL Y H
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF--------MEELADALHYCH-- 131
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM----ISYKSPEYQ 445
+ VIH ++K N+L+ + ++D+G+S V P +R + Y PE
Sbjct: 132 -----ERKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMI 184
Query: 446 SSKKISRKSDVWSFGCLLLELLTG 469
K K D+W G L E L G
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 276 LGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
LGKG FGN Y A + A V+ + + K + + R+++ + + +HPN+L L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
Y+ L+ ++A G ++ + K SK F + +A AL Y H K
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQ--KLSK----FDEQRTATYITELANALSYCHSK-- 128
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPEYQSS 447
VIH ++K N+LL + ++D+G+S V P + + + Y PE
Sbjct: 129 -----RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIEG 181
Query: 448 KKISRKSDVWSFGCLLLELLTGR 470
+ K D+WS G L E L G+
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 89/204 (43%), Gaps = 27/204 (13%)
Query: 276 LGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
LGKG FGN Y A + A V+ + + K + + R+++ + + +HPN+L +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRI--HGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
Y+ L+ +FA G L+ + HG + F +A AL Y H
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF--------MEELADALHYCH-- 131
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM----ISYKSPEYQ 445
+ VIH ++K N+L+ + ++D+G+S V P +R + Y PE
Sbjct: 132 -----ERKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMI 184
Query: 446 SSKKISRKSDVWSFGCLLLELLTG 469
K K D+W G L E L G
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 100/230 (43%), Gaps = 40/230 (17%)
Query: 314 QLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRL 373
++ V+ KHPN++ L Y S L+ + G LF+RI K R SRL
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI----VEKGFYTERDASRL 121
Query: 374 LVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNIL---LDDNEMVLVSDYGFSSLVAQP 430
+ V A++YLH ++H +LK N+L LD++ +++SD+G S + P
Sbjct: 122 IFQ--VLDAVKYLH-------DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDP 171
Query: 431 IA----AQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLC 486
+ A Y +PE + K S+ D WS G + LL G + N A L
Sbjct: 172 GSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE----NDAKLF 227
Query: 487 SWVLRAVREEWTAEIFDSEI--SVQRSAAHGMLKLLQVAIQCCNKSPEKR 534
+L+A E FDS + SA + L++ K PEKR
Sbjct: 228 EQILKAEYE------FDSPYWDDISDSAKDFIRHLME-------KDPEKR 264
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 16/199 (8%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRL--RDLKPLITEEFRKQLLVIADQKHPNLLPLLAYY 333
LG G G +K + V+ ++L ++KP I + ++L V+ + P ++ +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 334 FSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSR 393
+S+ E + + G+L + RIP + ++ +A V + L YL K K
Sbjct: 74 YSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIA--VIKGLTYLREKHK-- 125
Query: 394 TQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM--ISYKSPEYQSSKKIS 451
++H ++K +NIL++ + + D+G S + +A + SY SPE S
Sbjct: 126 ----IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS 181
Query: 452 RKSDVWSFGCLLLELLTGR 470
+SD+WS G L+E+ GR
Sbjct: 182 VQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 16/199 (8%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRL--RDLKPLITEEFRKQLLVIADQKHPNLLPLLAYY 333
LG G G +K + V+ ++L ++KP I + ++L V+ + P ++ +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 334 FSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSR 393
+S+ E + + G+L + RIP + ++ +A V + L YL K K
Sbjct: 74 YSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIA--VIKGLTYLREKHK-- 125
Query: 394 TQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM--ISYKSPEYQSSKKIS 451
++H ++K +NIL++ + + D+G S + +A + SY SPE S
Sbjct: 126 ----IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS 181
Query: 452 RKSDVWSFGCLLLELLTGR 470
+SD+WS G L+E+ GR
Sbjct: 182 VQSDIWSMGLSLVEMAVGR 200
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 19/204 (9%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYY 333
E LG G FG + G V VK L+ + + F + ++ +H L+ L A
Sbjct: 20 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV- 77
Query: 334 FSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSR 393
+ + ++ ++ NG+L + + + + I L +A +A + ++ ++
Sbjct: 78 VTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIEERN--- 130
Query: 394 TQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-----ISYKSPEYQSSK 448
IH +L++ NIL+ D ++D+G + L+ R I + +PE +
Sbjct: 131 ----YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG 186
Query: 449 KISRKSDVWSFGCLLLELLT-GRI 471
+ KSDVWSFG LL E++T GRI
Sbjct: 187 TFTIKSDVWSFGILLTEIVTHGRI 210
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 119/281 (42%), Gaps = 41/281 (14%)
Query: 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAY 332
E LG G FG + G V VK L+ + + F + ++ +H L+ L A
Sbjct: 13 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 71
Query: 333 YFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKS 392
+ + ++ ++ NG+L + + + + I L +A +A + ++ ++
Sbjct: 72 -VTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIEERN-- 124
Query: 393 RTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV-----AQPIAAQRMISYKSPEYQSS 447
IH +L++ NIL+ D ++D+G + L+ A+ I + +PE +
Sbjct: 125 -----YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY 179
Query: 448 KKISRKSDVWSFGCLLLELLT-GRI--STHSAPQGINGADLCSWVLRAVREEWTAEIFDS 504
+ KSDVWSFG LL E++T GRI + P+ I + R VR + E
Sbjct: 180 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG---YRMVRPDNCPE---- 232
Query: 505 EISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
+L Q+ C + PE RP + S LE
Sbjct: 233 -------------ELYQLMRLCWKERPEDRPTFDYLRSVLE 260
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 118/280 (42%), Gaps = 41/280 (14%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYY 333
E LG G FG + G V VK L+ + + F + ++ +H L+ L A
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV- 76
Query: 334 FSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSR 393
+ + ++ ++ NG+L + + + + I L +A +A + ++ ++
Sbjct: 77 VTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIEERN--- 129
Query: 394 TQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-----ISYKSPEYQSSK 448
IH +L++ NIL+ D ++D+G + L+ R I + +PE +
Sbjct: 130 ----YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG 185
Query: 449 KISRKSDVWSFGCLLLELLT-GRI--STHSAPQGINGADLCSWVLRAVREEWTAEIFDSE 505
+ KSDVWSFG LL E++T GRI + P+ I + R VR + E
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG---YRMVRPDNCPE----- 237
Query: 506 ISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
+L Q+ C + PE RP + S LE
Sbjct: 238 ------------ELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 103/237 (43%), Gaps = 28/237 (11%)
Query: 255 IEDEQPAGFKLNDLLKAPAEGLGKGIFGN----SYKALLEGRAPVV-VKRLRDLKPLITE 309
ED P F+ L + LGKG FG+ Y L + VV VK+L+
Sbjct: 2 FEDRDPTQFEERHL--KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 59
Query: 310 EFRKQLLVIADQKHPNLLPLLAYYFSNDEK--LLVYKFAGNGNLFNRIHGGKSSKNRIPF 367
+F +++ ++ +H N++ +S + L+ ++ G+L + + + I
Sbjct: 60 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKL 119
Query: 368 RCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV 427
L + + +EYL K IH +L + NIL+++ V + D+G + ++
Sbjct: 120 -----LQYTSQICKGMEYLGTK-------RYIHRDLATRNILVENENRVKIGDFGLTKVL 167
Query: 428 AQPIAAQRM-------ISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP 477
Q ++ I + +PE + K S SDVWSFG +L EL T + S P
Sbjct: 168 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP 224
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 90/201 (44%), Gaps = 19/201 (9%)
Query: 276 LGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
LGKG FGN Y A + A V+ + + K + + R+++ + + +HPN+L L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
Y+ L+ ++A G ++ + K SK F + +A AL Y H K
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQ--KLSK----FDEQRTATYITELANALSYCHSK-- 128
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV--AQPIAAQRMISYKSPEYQSSKK 449
VIH ++K N+LL + ++D+G+S ++ + Y PE +
Sbjct: 129 -----RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRM 183
Query: 450 ISRKSDVWSFGCLLLELLTGR 470
K D+WS G L E L G+
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGK 204
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 19/204 (9%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYY 333
E LG G FG + G V VK L+ + + F + ++ +H L+ L A
Sbjct: 21 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV- 78
Query: 334 FSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSR 393
+ + ++ ++ NG+L + + + + I L +A +A + ++ ++
Sbjct: 79 VTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIEERN--- 131
Query: 394 TQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-----ISYKSPEYQSSK 448
IH +L++ NIL+ D ++D+G + L+ R I + +PE +
Sbjct: 132 ----YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG 187
Query: 449 KISRKSDVWSFGCLLLELLT-GRI 471
+ KSDVWSFG LL E++T GRI
Sbjct: 188 TFTIKSDVWSFGILLTEIVTHGRI 211
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 276 LGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
LGKG FGN Y A + A V+ + + K + + R+++ + + +HPN+L L
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
Y+ L+ ++A G ++ + K SK F + +A AL Y H K
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQ--KLSK----FDEQRTATYITELANALSYCHSKR- 132
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPEYQSS 447
VIH ++K N+LL + ++D+G+S V P + + + Y PE
Sbjct: 133 ------VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 184
Query: 448 KKISRKSDVWSFGCLLLELLTGR 470
+ K D+WS G L E L G+
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 16/199 (8%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRL--RDLKPLITEEFRKQLLVIADQKHPNLLPLLAYY 333
LG G G +K + V+ ++L ++KP I + ++L V+ + P ++ +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 334 FSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSR 393
+S+ E + + G+L + RIP + ++ +A V + L YL K K
Sbjct: 74 YSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIA--VIKGLTYLREKHK-- 125
Query: 394 TQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM--ISYKSPEYQSSKKIS 451
++H ++K +NIL++ + + D+G S + +A + SY SPE S
Sbjct: 126 ----IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS 181
Query: 452 RKSDVWSFGCLLLELLTGR 470
+SD+WS G L+E+ GR
Sbjct: 182 VQSDIWSMGLSLVEMAVGR 200
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 19/204 (9%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYY 333
E LG G FG + G V VK L+ + + F + ++ +H L+ L A
Sbjct: 27 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV- 84
Query: 334 FSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSR 393
+ + ++ ++ NG+L + + + + I L +A +A + ++ ++
Sbjct: 85 VTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIEERN--- 137
Query: 394 TQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-----ISYKSPEYQSSK 448
IH +L++ NIL+ D ++D+G + L+ R I + +PE +
Sbjct: 138 ----YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG 193
Query: 449 KISRKSDVWSFGCLLLELLT-GRI 471
+ KSDVWSFG LL E++T GRI
Sbjct: 194 TFTIKSDVWSFGILLTEIVTHGRI 217
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 276 LGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
LGKG FGN Y A + A V+ + + K + + R+++ + + +HPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
Y+ L+ ++A G ++ + K SK F + +A AL Y H K
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQ--KLSK----FDEQRTATYITELANALSYCHSKR- 128
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS--SLVAQPIAAQRMISYKSPEYQSSKK 449
VIH ++K N+LL + ++D+G+S + ++ A + Y PE +
Sbjct: 129 ------VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRM 182
Query: 450 ISRKSDVWSFGCLLLELLTGR 470
K D+WS G L E L G+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGK 203
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 92/180 (51%), Gaps = 20/180 (11%)
Query: 295 VVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNR 354
V VK++ K E +++++ D +H N++ + Y DE +V +F G L +
Sbjct: 102 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 161
Query: 355 IHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNE 414
+ + ++ +I C + V +AL LH + VIH ++KS +ILL +
Sbjct: 162 VTHTRMNEEQIAAVCLA-------VLQALSVLHAQ-------GVIHRDIKSDSILLTHDG 207
Query: 415 MVLVSDYGFSSLVAQPIAAQRMISYKSPEYQSSKKISR-----KSDVWSFGCLLLELLTG 469
V +SD+GF + V++ + ++ + +P + + + ISR + D+WS G +++E++ G
Sbjct: 208 RVKLSDFGFCAQVSKEVPRRKXL-VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 266
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 19/204 (9%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYY 333
E LG G FG + G V VK L+ + + F + ++ +H L+ L A
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV- 82
Query: 334 FSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSR 393
+ + ++ ++ NG+L + + + + I L +A +A + ++ ++
Sbjct: 83 VTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIEERN--- 135
Query: 394 TQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-----ISYKSPEYQSSK 448
IH +L++ NIL+ D ++D+G + L+ R I + +PE +
Sbjct: 136 ----YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG 191
Query: 449 KISRKSDVWSFGCLLLELLT-GRI 471
+ KSDVWSFG LL E++T GRI
Sbjct: 192 TFTIKSDVWSFGILLTEIVTHGRI 215
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 119/281 (42%), Gaps = 41/281 (14%)
Query: 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAY 332
E LG G FG + G V VK L+ + + F + ++ +H L+ L A
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 333 YFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKS 392
+ + ++ ++ NG+L + + + + I L +A +A + ++ ++
Sbjct: 77 -VTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIEERN-- 129
Query: 393 RTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV-----AQPIAAQRMISYKSPEYQSS 447
IH +L++ NIL+ D ++D+G + L+ A+ I + +PE +
Sbjct: 130 -----YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY 184
Query: 448 KKISRKSDVWSFGCLLLELLT-GRI--STHSAPQGINGADLCSWVLRAVREEWTAEIFDS 504
+ KSDVWSFG LL E++T GRI + P+ I + R VR + E
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG---YRMVRPDNCPE---- 237
Query: 505 EISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
+L Q+ C + PE RP + S LE
Sbjct: 238 -------------ELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 19/204 (9%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYY 333
E LG G FG + G V VK L+ + + F + ++ +H L+ L A
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV- 76
Query: 334 FSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSR 393
+ + ++ ++ NG+L + + + + I L +A +A + ++ ++
Sbjct: 77 VTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIEERN--- 129
Query: 394 TQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-----ISYKSPEYQSSK 448
IH +L++ NIL+ D ++D+G + L+ R I + +PE +
Sbjct: 130 ----YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG 185
Query: 449 KISRKSDVWSFGCLLLELLT-GRI 471
+ KSDVWSFG LL E++T GRI
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRI 209
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 276 LGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
LGKG FGN Y A + A V+ + + K + + R+++ + + +HPN+L L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
Y+ L+ ++A G ++ + K SK F + +A AL Y H K
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQ--KLSK----FDEQRTATYITELANALSYCHSK-- 130
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPEYQSS 447
VIH ++K N+LL + ++D+G+S V P + + + Y PE
Sbjct: 131 -----RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 183
Query: 448 KKISRKSDVWSFGCLLLELLTGR 470
+ K D+WS G L E L G+
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 276 LGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
LGKG FGN Y A + A V+ + + K + + R+++ + + +HPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
Y+ L+ ++A G ++ + K SK F + +A AL Y H K
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQ--KLSK----FDEQRTATYITELANALSYCHSK-- 127
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPEYQSS 447
VIH ++K N+LL + ++D+G+S V P + + + Y PE
Sbjct: 128 -----RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEG 180
Query: 448 KKISRKSDVWSFGCLLLELLTGR 470
+ K D+WS G L E L G+
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 276 LGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
LGKG FGN Y A + A V+ + + K + + R+++ + + +HPN+L L
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
Y+ L+ ++A G ++ + K SK F + +A AL Y H K
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQ--KLSK----FDEQRTATYITELANALSYCHSK-- 126
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPEYQSS 447
VIH ++K N+LL + ++D+G+S V P + + + Y PE
Sbjct: 127 -----RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 179
Query: 448 KKISRKSDVWSFGCLLLELLTGR 470
+ K D+WS G L E L G+
Sbjct: 180 RMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 19/204 (9%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYY 333
E LG G FG + G V VK L+ + + F + ++ +H L+ L A
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV- 82
Query: 334 FSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSR 393
+ + ++ ++ NG+L + + + + I L +A +A + ++ ++
Sbjct: 83 VTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIEERN--- 135
Query: 394 TQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV-----AQPIAAQRMISYKSPEYQSSK 448
IH +L++ NIL+ D ++D+G + L+ A+ I + +PE +
Sbjct: 136 ----YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG 191
Query: 449 KISRKSDVWSFGCLLLELLT-GRI 471
+ KSDVWSFG LL E++T GRI
Sbjct: 192 TFTIKSDVWSFGILLTEIVTHGRI 215
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 19/204 (9%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYY 333
E LG G FG + G V VK L+ + + F + ++ +H L+ L A
Sbjct: 28 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV- 85
Query: 334 FSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSR 393
+ + ++ ++ NG+L + + + + I L +A +A + ++ ++
Sbjct: 86 VTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIEERN--- 138
Query: 394 TQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-----ISYKSPEYQSSK 448
IH +L++ NIL+ D ++D+G + L+ R I + +PE +
Sbjct: 139 ----YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG 194
Query: 449 KISRKSDVWSFGCLLLELLT-GRI 471
+ KSDVWSFG LL E++T GRI
Sbjct: 195 TFTIKSDVWSFGILLTEIVTHGRI 218
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 276 LGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
LGKG FGN Y A + A V+ + + K + + R+++ + + +HPN+L L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
Y+ L+ ++A G ++ + K SK F + +A AL Y H K
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQ--KLSK----FDEQRTATYITELANALSYCHSK-- 130
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPEYQSS 447
VIH ++K N+LL + ++D+G+S V P + + + Y PE
Sbjct: 131 -----RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEG 183
Query: 448 KKISRKSDVWSFGCLLLELLTGR 470
+ K D+WS G L E L G+
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 19/204 (9%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYY 333
E LG G FG + G V VK L+ + + F + ++ +H L+ L A
Sbjct: 24 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV- 81
Query: 334 FSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSR 393
+ + ++ ++ NG+L + + + + I L +A +A + ++ ++
Sbjct: 82 VTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIEERN--- 134
Query: 394 TQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV-----AQPIAAQRMISYKSPEYQSSK 448
IH +L++ NIL+ D ++D+G + L+ A+ I + +PE +
Sbjct: 135 ----YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG 190
Query: 449 KISRKSDVWSFGCLLLELLT-GRI 471
+ KSDVWSFG LL E++T GRI
Sbjct: 191 TFTIKSDVWSFGILLTEIVTHGRI 214
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 276 LGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
LGKG FGN Y A + A V+ + + K + + R+++ + + +HPN+L L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
Y+ L+ ++A G ++ + K SK F + +A AL Y H K
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQ--KLSK----FDEQRTATYITELANALSYCHSK-- 130
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPEYQSS 447
VIH ++K N+LL + ++D+G+S V P + + + Y PE
Sbjct: 131 -----RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEMIEG 183
Query: 448 KKISRKSDVWSFGCLLLELLTGR 470
+ K D+WS G L E L G+
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 120/288 (41%), Gaps = 44/288 (15%)
Query: 276 LGKGIFGNSYKALLEG---RAPVVVKRLRDLKPLITE-EFRKQLLVIAD-QKHPNLLPLL 330
+G+G FG KA ++ R +KR+++ +F +L V+ HPN++ LL
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 89
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPF----------RCRSRLLVARGVA 380
L ++A +GNL + + + + F + L A VA
Sbjct: 90 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 149
Query: 381 RALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS---SLVAQPIAAQRMI 437
R ++YL +Q IH NL + NIL+ +N + ++D+G S + + + +
Sbjct: 150 RGMDYL-------SQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPV 202
Query: 438 SYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQ-GINGADLCSWVLRAVREE 496
+ + E + + SDVWS+G LL E+ +S P G+ A+L + + R E
Sbjct: 203 RWMAIESLNYSVYTTNSDVWSYGVLLWEI----VSLGGTPYCGMTCAELYEKLPQGYRLE 258
Query: 497 WTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
D + R QC + P +RP A+++ L
Sbjct: 259 KPLNCDDEVYDLMR--------------QCWREKPYERPSFAQILVSL 292
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 276 LGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
LGKG FGN Y A + A V+ + + K + + R+++ + + +HPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
Y+ L+ ++A G ++ + K SK F + +A AL Y H K
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQ--KLSK----FDEQRTATYITELANALSYCHSK-- 127
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPEYQSS 447
VIH ++K N+LL + ++D+G+S V P + + + Y PE
Sbjct: 128 -----RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTXLCGTLDYLPPEMIEG 180
Query: 448 KKISRKSDVWSFGCLLLELLTGR 470
+ K D+WS G L E L G+
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 100/230 (43%), Gaps = 40/230 (17%)
Query: 314 QLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRL 373
++ V+ KHPN++ L Y S L+ + G LF+RI K R SRL
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI----VEKGFYTERDASRL 121
Query: 374 LVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNIL---LDDNEMVLVSDYGFSSLVAQP 430
+ V A++YLH ++H +LK N+L LD++ +++SD+G S + P
Sbjct: 122 IFQ--VLDAVKYLH-------DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDP 171
Query: 431 IA----AQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLC 486
+ A Y +PE + K S+ D WS G + LL G + N A L
Sbjct: 172 GSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE----NDAKLF 227
Query: 487 SWVLRAVREEWTAEIFDSEI--SVQRSAAHGMLKLLQVAIQCCNKSPEKR 534
+L+A E FDS + SA + L++ K PEKR
Sbjct: 228 EQILKAEYE------FDSPYWDDISDSAKDFIRHLME-------KDPEKR 264
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 100/230 (43%), Gaps = 40/230 (17%)
Query: 314 QLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRL 373
++ V+ KHPN++ L Y S L+ + G LF+RI K R SRL
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI----VEKGFYTERDASRL 121
Query: 374 LVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNIL---LDDNEMVLVSDYGFSSLVAQP 430
+ V A++YLH ++H +LK N+L LD++ +++SD+G S + P
Sbjct: 122 IFQ--VLDAVKYLH-------DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDP 171
Query: 431 IA----AQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLC 486
+ A Y +PE + K S+ D WS G + LL G + N A L
Sbjct: 172 GSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE----NDAKLF 227
Query: 487 SWVLRAVREEWTAEIFDSEI--SVQRSAAHGMLKLLQVAIQCCNKSPEKR 534
+L+A E FDS + SA + L++ K PEKR
Sbjct: 228 EQILKAEYE------FDSPYWDDISDSAKDFIRHLME-------KDPEKR 264
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 19/204 (9%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYY 333
E LG G FG + G V VK L+ + + F + ++ +H L+ L A
Sbjct: 29 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV- 86
Query: 334 FSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSR 393
+ + ++ ++ NG+L + + + + I L +A +A + ++ ++
Sbjct: 87 VTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIEERN--- 139
Query: 394 TQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV-----AQPIAAQRMISYKSPEYQSSK 448
IH +L++ NIL+ D ++D+G + L+ A+ I + +PE +
Sbjct: 140 ----YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG 195
Query: 449 KISRKSDVWSFGCLLLELLT-GRI 471
+ KSDVWSFG LL E++T GRI
Sbjct: 196 TFTIKSDVWSFGILLTEIVTHGRI 219
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 84/160 (52%), Gaps = 18/160 (11%)
Query: 314 QLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRL 373
+++++ D +H N++ + Y +E ++ +F G L + + + ++ +I C +
Sbjct: 92 EVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEA-- 149
Query: 374 LVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAA 433
V +AL YLH + VIH ++KS +ILL + V +SD+GF + +++ +
Sbjct: 150 -----VLQALAYLHAQ-------GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK 197
Query: 434 QRMIS----YKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
++ + + +PE S + + D+WS G +++E++ G
Sbjct: 198 RKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDG 237
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 92/180 (51%), Gaps = 20/180 (11%)
Query: 295 VVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNR 354
V VK++ K E +++++ D +H N++ + Y DE +V +F G L +
Sbjct: 179 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 238
Query: 355 IHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNE 414
+ + ++ +I C + V +AL LH + VIH ++KS +ILL +
Sbjct: 239 VTHTRMNEEQIAAVCLA-------VLQALSVLHAQ-------GVIHRDIKSDSILLTHDG 284
Query: 415 MVLVSDYGFSSLVAQPIAAQRMISYKSPEYQSSKKISR-----KSDVWSFGCLLLELLTG 469
V +SD+GF + V++ + ++ + +P + + + ISR + D+WS G +++E++ G
Sbjct: 285 RVKLSDFGFCAQVSKEVPRRKXL-VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 343
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 129/290 (44%), Gaps = 57/290 (19%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKR-----LRDLKPLITEEFRKQLL----VIADQKHPNL 326
+G G FG + GR V KR ++ LK T++ R+ L ++ HPN+
Sbjct: 37 IGVGEFGE----VCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNI 92
Query: 327 LPLLAYYFSNDEKLLVYKFAGNGNL--FNRIHGGKSSKNRIPFRCRSRLLVARGVARALE 384
+ L +++ ++ NG+L F R + G+ F + + RG+ ++
Sbjct: 93 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-------FTVIQLVGMLRGIGSGMK 145
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ-PIAAQRM------I 437
YL + + +H +L + NIL++ N + VSD+G S ++ P AA I
Sbjct: 146 YL-------SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPI 198
Query: 438 SYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP-QGINGADLCSWVLRAVREE 496
+ +PE + +K + SDVWS+G ++ E++ S P ++ D V++A+ E
Sbjct: 199 RWTAPEAIAYRKFTSASDVWSYGIVMWEVM----SYGERPYWDMSNQD----VIKAIEEG 250
Query: 497 WT-AEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
+ D I+ L Q+ + C K RP+ ++V+ L+
Sbjct: 251 YRLPPPMDCPIA-----------LHQLMLDCWQKERSDRPKFGQIVNMLD 289
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 274 EGLGKGIFGN----SYKALLEGRAPVV-VKRLRDLKPLITEEFRKQLLVIADQKHPNLLP 328
+ LGKG FG+ Y L + VV VK+L+ +F +++ ++ +H N++
Sbjct: 15 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 329 LLAYYFSNDEK--LLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYL 386
+S + L+ ++ G+L + + K + I L + + +EYL
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYL 129
Query: 387 HHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-------ISY 439
K IH +L + NIL+++ V + D+G + ++ Q ++ I +
Sbjct: 130 GTK-------RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFW 182
Query: 440 KSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP 477
+PE + K S SDVWSFG +L EL T + S P
Sbjct: 183 YAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP 220
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 97/216 (44%), Gaps = 26/216 (12%)
Query: 276 LGKGIFGN----SYKALLEGRAPVV-VKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLL 330
LGKG FG+ Y L + VV VK+L+ +F +++ ++ +H N++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 331 AYYFSNDEK--LLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
+S + L+ ++ G+L + + K + I L + + +EYL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGT 132
Query: 389 KDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-------ISYKS 441
K IH +L + NIL+++ V + D+G + ++ Q ++ I + +
Sbjct: 133 K-------RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 185
Query: 442 PEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP 477
PE + K S SDVWSFG +L EL T + S P
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP 221
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 97/216 (44%), Gaps = 26/216 (12%)
Query: 276 LGKGIFGN----SYKALLEGRAPVV-VKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLL 330
LGKG FG+ Y L + VV VK+L+ +F +++ ++ +H N++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 331 AYYFSNDEK--LLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
+S + L+ ++ G+L + + K + I L + + +EYL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGT 132
Query: 389 KDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-------ISYKS 441
K IH +L + NIL+++ V + D+G + ++ Q ++ I + +
Sbjct: 133 K-------RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 185
Query: 442 PEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP 477
PE + K S SDVWSFG +L EL T + S P
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP 221
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 97/216 (44%), Gaps = 26/216 (12%)
Query: 276 LGKGIFGN----SYKALLEGRAPVV-VKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLL 330
LGKG FG+ Y L + VV VK+L+ +F +++ ++ +H N++
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 331 AYYFSNDEK--LLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
+S + L+ ++ G+L + + K + I L + + +EYL
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGT 130
Query: 389 KDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-------ISYKS 441
K IH +L + NIL+++ V + D+G + ++ Q ++ I + +
Sbjct: 131 K-------RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 183
Query: 442 PEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP 477
PE + K S SDVWSFG +L EL T + S P
Sbjct: 184 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP 219
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 32/210 (15%)
Query: 276 LGKGIFG----------NSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPN 325
LGKG FG Y A+ + V+V + ++ +TE V+ + +HP
Sbjct: 159 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK-DEVAHTLTEN-----RVLQNSRHPF 212
Query: 326 LLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
L L + ++D V ++A G LF + S+ R+ R+R A + AL+Y
Sbjct: 213 LTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAE-IVSALDY 266
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI----SYKS 441
LH ++ V++ +LK N++LD + + ++D+G + A + Y +
Sbjct: 267 LH------SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLA 320
Query: 442 PEYQSSKKISRKSDVWSFGCLLLELLTGRI 471
PE R D W G ++ E++ GR+
Sbjct: 321 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 350
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 32/210 (15%)
Query: 276 LGKGIFG----------NSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPN 325
LGKG FG Y A+ + V+V + ++ +TE V+ + +HP
Sbjct: 17 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK-DEVAHTLTEN-----RVLQNSRHPF 70
Query: 326 LLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
L L + ++D V ++A G LF + S+ R+ R+R A + AL+Y
Sbjct: 71 LTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAE-IVSALDY 124
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI----SYKS 441
LH ++ V++ +LK N++LD + + ++D+G + A + Y +
Sbjct: 125 LH------SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLA 178
Query: 442 PEYQSSKKISRKSDVWSFGCLLLELLTGRI 471
PE R D W G ++ E++ GR+
Sbjct: 179 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 208
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 32/210 (15%)
Query: 276 LGKGIFG----------NSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPN 325
LGKG FG Y A+ + V+V + ++ +TE V+ + +HP
Sbjct: 156 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK-DEVAHTLTEN-----RVLQNSRHPF 209
Query: 326 LLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
L L + ++D V ++A G LF + S+ R+ R+R A + AL+Y
Sbjct: 210 LTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAE-IVSALDY 263
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI----SYKS 441
LH ++ V++ +LK N++LD + + ++D+G + A + Y +
Sbjct: 264 LH------SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLA 317
Query: 442 PEYQSSKKISRKSDVWSFGCLLLELLTGRI 471
PE R D W G ++ E++ GR+
Sbjct: 318 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 347
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 100/230 (43%), Gaps = 40/230 (17%)
Query: 314 QLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRL 373
++ V+ KHPN++ L Y S L+ + G LF+RI K R SRL
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI----VEKGFYTERDASRL 121
Query: 374 LVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNIL---LDDNEMVLVSDYGFSSLVAQP 430
+ V A++YLH ++H +LK N+L LD++ +++SD+G S + P
Sbjct: 122 IFQ--VLDAVKYLH-------DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDP 171
Query: 431 IA----AQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLC 486
+ A Y +PE + K S+ D WS G + LL G + N A L
Sbjct: 172 GSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE----NDAKLF 227
Query: 487 SWVLRAVREEWTAEIFDSEI--SVQRSAAHGMLKLLQVAIQCCNKSPEKR 534
+L+A E FDS + SA + L++ K PEKR
Sbjct: 228 EQILKAEYE------FDSPYWDDISDSAKDFIRHLME-------KDPEKR 264
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 32/210 (15%)
Query: 276 LGKGIFG----------NSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPN 325
LGKG FG Y A+ + V+V + ++ +TE V+ + +HP
Sbjct: 16 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK-DEVAHTLTEN-----RVLQNSRHPF 69
Query: 326 LLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
L L + ++D V ++A G LF + S+ R+ R+R A + AL+Y
Sbjct: 70 LTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAE-IVSALDY 123
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI----SYKS 441
LH ++ V++ +LK N++LD + + ++D+G + A + Y +
Sbjct: 124 LH------SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLA 177
Query: 442 PEYQSSKKISRKSDVWSFGCLLLELLTGRI 471
PE R D W G ++ E++ GR+
Sbjct: 178 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 207
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 23/205 (11%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLV-----IADQKHPNLLPLL 330
+G G +G K + ++V + D + E KQ+LV + + KHPN++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAE--KQMLVSEVNLLRELKHPNIV--- 68
Query: 331 AYY-----FSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
YY +N +V ++ G+L + I K +K R L V + AL+
Sbjct: 69 RYYDRIIDRTNTTLYIVMEYCEGGDLASVI--TKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI----SYKS 441
H + S V+H +LK N+ LD + V + D+G + ++ + + Y S
Sbjct: 127 CHRR--SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMS 184
Query: 442 PEYQSSKKISRKSDVWSFGCLLLEL 466
PE + + KSD+WS GCLL EL
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 32/210 (15%)
Query: 276 LGKGIFG----------NSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPN 325
LGKG FG Y A+ + V+V + ++ +TE V+ + +HP
Sbjct: 18 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK-DEVAHTLTEN-----RVLQNSRHPF 71
Query: 326 LLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
L L + ++D V ++A G LF + S+ R+ R+R A + AL+Y
Sbjct: 72 LTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAE-IVSALDY 125
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI----SYKS 441
LH ++ V++ +LK N++LD + + ++D+G + A + Y +
Sbjct: 126 LH------SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLA 179
Query: 442 PEYQSSKKISRKSDVWSFGCLLLELLTGRI 471
PE R D W G ++ E++ GR+
Sbjct: 180 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 209
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 32/210 (15%)
Query: 276 LGKGIFGN--SYKALLEGRAPVVVKRLRDLKPLITEEFRKQLL----VIADQKHPNLLPL 329
+G G FG S L G+ + V ++ LK TE+ R+ L ++ HPN++ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVA-IKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 73
Query: 330 LAYYFSNDEKLLVYKFAGNGNL--FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
+ +++ +F NG+L F R + G+ F + + RG+A ++YL
Sbjct: 74 EGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-------FTVIQLVGMLRGIAAGMKYLA 126
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV---------AQPIAAQRMIS 438
+ +H L + NIL++ N + VSD+G S + + + I
Sbjct: 127 DMN-------YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIR 179
Query: 439 YKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
+ +PE +K + SDVWS+G ++ E+++
Sbjct: 180 WTAPEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 97/216 (44%), Gaps = 26/216 (12%)
Query: 276 LGKGIFGN----SYKALLEGRAPVV-VKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLL 330
LGKG FG+ Y L + VV VK+L+ +F +++ ++ +H N++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 331 AYYFSNDEK--LLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
+S + L+ ++ G+L + + K + I L + + +EYL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGT 150
Query: 389 KDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-------ISYKS 441
K IH +L + NIL+++ V + D+G + ++ Q ++ I + +
Sbjct: 151 K-------RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 203
Query: 442 PEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP 477
PE + K S SDVWSFG +L EL T + S P
Sbjct: 204 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP 239
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 97/216 (44%), Gaps = 26/216 (12%)
Query: 276 LGKGIFGN----SYKALLEGRAPVV-VKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLL 330
LGKG FG+ Y L + VV VK+L+ +F +++ ++ +H N++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 331 AYYFSNDEK--LLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
+S + L+ ++ G+L + + K + I L + + +EYL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGT 150
Query: 389 KDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-------ISYKS 441
K IH +L + NIL+++ V + D+G + ++ Q ++ I + +
Sbjct: 151 K-------RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 203
Query: 442 PEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP 477
PE + K S SDVWSFG +L EL T + S P
Sbjct: 204 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP 239
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 129/290 (44%), Gaps = 57/290 (19%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKR-----LRDLKPLITEEFRKQLL----VIADQKHPNL 326
+G G FG + GR V KR ++ LK T++ R+ L ++ HPN+
Sbjct: 16 IGVGEFGE----VCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNI 71
Query: 327 LPLLAYYFSNDEKLLVYKFAGNGNL--FNRIHGGKSSKNRIPFRCRSRLLVARGVARALE 384
+ L +++ ++ NG+L F R + G+ F + + RG+ ++
Sbjct: 72 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-------FTVIQLVGMLRGIGSGMK 124
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ-PIAAQRM------I 437
YL + + +H +L + NIL++ N + VSD+G S ++ P AA I
Sbjct: 125 YL-------SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPI 177
Query: 438 SYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP-QGINGADLCSWVLRAVREE 496
+ +PE + +K + SDVWS+G ++ E++ S P ++ D V++A+ E
Sbjct: 178 RWTAPEAIAYRKFTSASDVWSYGIVMWEVM----SYGERPYWDMSNQD----VIKAIEEG 229
Query: 497 WT-AEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
+ D I+ L Q+ + C K RP+ ++V+ L+
Sbjct: 230 YRLPPPMDCPIA-----------LHQLMLDCWQKERSDRPKFGQIVNMLD 268
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 131/292 (44%), Gaps = 46/292 (15%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVK-RLRDLKPLIT-----EEFRKQLLVIADQKHPNLLPL 329
LGKG FG+ +A L+ VK ++ LK I EEF ++ + + HP++ L
Sbjct: 31 LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKL 90
Query: 330 LAYYFSNDEK------LLVYKFAGNGNLFNRIHGGKSSKN--RIPFRCRSRLLVARGVAR 381
+ + K +++ F +G+L + + +N +P + R +V +A
Sbjct: 91 VGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV--DIAC 148
Query: 382 ALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV------AQPIAAQR 435
+EYL ++ IH +L + N +L ++ V V+D+G S + Q A++
Sbjct: 149 GMEYLSSRN-------FIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKL 201
Query: 436 MISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVRE 495
+ + + E + + SDVW+FG + E++T R T A GI A++ ++++ R
Sbjct: 202 PVKWLALESLADNLYTVHSDVWAFGVTMWEIMT-RGQTPYA--GIENAEIYNYLIGGNRL 258
Query: 496 EWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
+ E M ++ + QC + P++RP + ELE I
Sbjct: 259 KQPPEC--------------MEEVYDLMYQCWSADPKQRPSFTCLRMELENI 296
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 129/290 (44%), Gaps = 57/290 (19%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKR-----LRDLKPLITEEFRKQLL----VIADQKHPNL 326
+G G FG + GR V KR ++ LK T++ R+ L ++ HPN+
Sbjct: 22 IGVGEFGE----VCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNI 77
Query: 327 LPLLAYYFSNDEKLLVYKFAGNGNL--FNRIHGGKSSKNRIPFRCRSRLLVARGVARALE 384
+ L +++ ++ NG+L F R + G+ F + + RG+ ++
Sbjct: 78 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-------FTVIQLVGMLRGIGSGMK 130
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ-PIAAQRM------I 437
YL + + +H +L + NIL++ N + VSD+G S ++ P AA I
Sbjct: 131 YL-------SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPI 183
Query: 438 SYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP-QGINGADLCSWVLRAVREE 496
+ +PE + +K + SDVWS+G ++ E++ S P ++ D V++A+ E
Sbjct: 184 RWTAPEAIAYRKFTSASDVWSYGIVMWEVM----SYGERPYWDMSNQD----VIKAIEEG 235
Query: 497 WT-AEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
+ D I+ L Q+ + C K RP+ ++V+ L+
Sbjct: 236 YRLPPPMDCPIA-----------LHQLMLDCWQKERSDRPKFGQIVNMLD 274
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 23/205 (11%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLV-----IADQKHPNLLPLL 330
+G G +G K + ++V + D + E KQ+LV + + KHPN++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAE--KQMLVSEVNLLRELKHPNIV--- 68
Query: 331 AYY-----FSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
YY +N +V ++ G+L + I K +K R L V + AL+
Sbjct: 69 RYYDRIIDRTNTTLYIVMEYCEGGDLASVI--TKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI----SYKS 441
H + S V+H +LK N+ LD + V + D+G + ++ + + Y S
Sbjct: 127 CHRR--SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMS 184
Query: 442 PEYQSSKKISRKSDVWSFGCLLLEL 466
PE + + KSD+WS GCLL EL
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 117/251 (46%), Gaps = 42/251 (16%)
Query: 256 EDEQPAGFKLNDLLKAPAEGLGKGIFGNSYKALL----EGRAPVVVKRLRDLKPLITEEF 311
E P+ F +LLK LG+G FG + + R +K L+ + +
Sbjct: 19 EKADPSQF---ELLKV----LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV 71
Query: 312 RKQLL--VIADQKHPNLLPLLAYYFSNDEKL-LVYKFAGNGNLFNRIHGGKSSKNRIPFR 368
R ++ ++ + HP ++ L Y F + KL L+ F G+LF R+ SK +
Sbjct: 72 RTKMERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRL-----SKEVMFTE 125
Query: 369 CRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428
+ +A +A AL++LH +I+ +LK NILLD+ + ++D+G S
Sbjct: 126 EDVKFYLAE-LALALDHLH-------SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--- 174
Query: 429 QPIAAQR-------MISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGIN 481
+ I ++ + Y +PE + + ++ +D WSFG L+ E+LTG + QG +
Sbjct: 175 ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF----QGKD 230
Query: 482 GADLCSWVLRA 492
+ + +L+A
Sbjct: 231 RKETMTMILKA 241
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 117/251 (46%), Gaps = 42/251 (16%)
Query: 256 EDEQPAGFKLNDLLKAPAEGLGKGIFGNSYKALL----EGRAPVVVKRLRDLKPLITEEF 311
E P+ F +LLK LG+G FG + + R +K L+ + +
Sbjct: 20 EKADPSQF---ELLKV----LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV 72
Query: 312 RKQLL--VIADQKHPNLLPLLAYYFSNDEKL-LVYKFAGNGNLFNRIHGGKSSKNRIPFR 368
R ++ ++ + HP ++ L Y F + KL L+ F G+LF R+ SK +
Sbjct: 73 RTKMERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRL-----SKEVMFTE 126
Query: 369 CRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428
+ +A +A AL++LH +I+ +LK NILLD+ + ++D+G S
Sbjct: 127 EDVKFYLAE-LALALDHLH-------SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--- 175
Query: 429 QPIAAQR-------MISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGIN 481
+ I ++ + Y +PE + + ++ +D WSFG L+ E+LTG + QG +
Sbjct: 176 ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF----QGKD 231
Query: 482 GADLCSWVLRA 492
+ + +L+A
Sbjct: 232 RKETMTMILKA 242
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 117/251 (46%), Gaps = 42/251 (16%)
Query: 256 EDEQPAGFKLNDLLKAPAEGLGKGIFGNSYKALL----EGRAPVVVKRLRDLKPLITEEF 311
E P+ F +LLK LG+G FG + + R +K L+ + +
Sbjct: 19 EKADPSQF---ELLKV----LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV 71
Query: 312 RKQLL--VIADQKHPNLLPLLAYYFSNDEKL-LVYKFAGNGNLFNRIHGGKSSKNRIPFR 368
R ++ ++ + HP ++ L Y F + KL L+ F G+LF R+ SK +
Sbjct: 72 RTKMERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRL-----SKEVMFTE 125
Query: 369 CRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428
+ +A +A AL++LH +I+ +LK NILLD+ + ++D+G S
Sbjct: 126 EDVKFYLAE-LALALDHLH-------SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--- 174
Query: 429 QPIAAQR-------MISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGIN 481
+ I ++ + Y +PE + + ++ +D WSFG L+ E+LTG + QG +
Sbjct: 175 ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF----QGKD 230
Query: 482 GADLCSWVLRA 492
+ + +L+A
Sbjct: 231 RKETMTMILKA 241
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 94/202 (46%), Gaps = 18/202 (8%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
LG G FG + V VK L+ + + F ++ ++ +H L+ L A
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKP-GTMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
+ ++ ++ G+L + + + K +P +A G+A Y+ K+
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMA----YIERKN----- 130
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV-----AQPIAAQRMISYKSPEYQSSKKI 450
IH +L++ N+L+ ++ M ++D+G + ++ A+ I + +PE +
Sbjct: 131 --YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCF 188
Query: 451 SRKSDVWSFGCLLLELLT-GRI 471
+ KSDVWSFG LL E++T G+I
Sbjct: 189 TIKSDVWSFGILLYEIVTYGKI 210
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 90/184 (48%), Gaps = 29/184 (15%)
Query: 317 VIADQKHPNLLPLLAYYFSNDEKL-LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLV 375
++AD HP ++ L Y F + KL L+ F G+LF R+ SK + + +
Sbjct: 83 ILADVNHPFVVKL-HYAFQTEGKLYLILDFLRGGDLFTRL-----SKEVMFTEEDVKFYL 136
Query: 376 ARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR 435
A +A L++LH +I+ +LK NILLD+ + ++D+G S + I ++
Sbjct: 137 AE-LALGLDHLH-------SLGIIYRDLKPENILLDEEGHIKLTDFGLSK---EAIDHEK 185
Query: 436 -------MISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSW 488
+ Y +PE + + S +D WS+G L+ E+LTG + QG + + +
Sbjct: 186 KAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPF----QGKDRKETMTL 241
Query: 489 VLRA 492
+L+A
Sbjct: 242 ILKA 245
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 82/171 (47%), Gaps = 14/171 (8%)
Query: 302 DLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSS 361
++KP I + ++L V+ + P ++ ++S+ E + + G+L + K
Sbjct: 52 EIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAK-- 109
Query: 362 KNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDY 421
RIP ++ +A V R L YL R + ++H ++K +NIL++ + + D+
Sbjct: 110 --RIPEEILGKVSIA--VLRGLAYL------REKHQIMHRDVKPSNILVNSRGEIKLCDF 159
Query: 422 GFSSLVAQPIAAQRM--ISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGR 470
G S + +A + SY +PE S +SD+WS G L+EL GR
Sbjct: 160 GVSGQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 26/216 (12%)
Query: 276 LGKGIFGN----SYKALLEGRAPVV-VKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLL 330
LGKG FG+ Y L + VV VK+L+ +F +++ ++ +H N++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 331 AYYFSNDEK--LLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
+S + L+ ++ G+L + + K + I L + + +EYL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGT 132
Query: 389 KDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI-------AAQRMISYKS 441
K IH +L + NIL+++ V + D+G + ++ Q + I + +
Sbjct: 133 K-------RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYA 185
Query: 442 PEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP 477
PE + K S SDVWSFG +L EL T + S P
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP 221
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 276 LGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
LGKG FGN Y A + A V+ + + K + + R+++ + + +HPN+L L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
Y+ L+ ++A G ++ + K SK F + +A AL Y H K
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQ--KLSK----FDEQRTATYITELANALSYCHSKR- 130
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPEYQSS 447
VIH ++K N+LL + ++++G+S V P + + + Y PE
Sbjct: 131 ------VIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 182
Query: 448 KKISRKSDVWSFGCLLLELLTGR 470
+ K D+WS G L E L G+
Sbjct: 183 RMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 94/202 (46%), Gaps = 18/202 (8%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
LG G FG + V VK L+ + + F ++ ++ +H L+ L A
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKP-GTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
+ ++ +F G+L + + + K +P +A G+A Y+ K+
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMA----YIERKN----- 129
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV-----AQPIAAQRMISYKSPEYQSSKKI 450
IH +L++ N+L+ ++ M ++D+G + ++ A+ I + +PE +
Sbjct: 130 --YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCF 187
Query: 451 SRKSDVWSFGCLLLELLT-GRI 471
+ KS+VWSFG LL E++T G+I
Sbjct: 188 TIKSNVWSFGILLYEIVTYGKI 209
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 120/288 (41%), Gaps = 44/288 (15%)
Query: 276 LGKGIFGNSYKALLEG---RAPVVVKRLRDLKPLITE-EFRKQLLVIAD-QKHPNLLPLL 330
+G+G FG KA ++ R +KR+++ +F +L V+ HPN++ LL
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 92
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPF----------RCRSRLLVARGVA 380
L ++A +GNL + + + + F + L A VA
Sbjct: 93 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 152
Query: 381 RALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS---SLVAQPIAAQRMI 437
R ++YL +Q IH +L + NIL+ +N + ++D+G S + + + +
Sbjct: 153 RGMDYL-------SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPV 205
Query: 438 SYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQ-GINGADLCSWVLRAVREE 496
+ + E + + SDVWS+G LL E+ +S P G+ A+L + + R E
Sbjct: 206 RWMAIESLNYSVYTTNSDVWSYGVLLWEI----VSLGGTPYCGMTCAELYEKLPQGYRLE 261
Query: 497 WTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
D + R QC + P +RP A+++ L
Sbjct: 262 KPLNCDDEVYDLMR--------------QCWREKPYERPSFAQILVSL 295
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 120/288 (41%), Gaps = 44/288 (15%)
Query: 276 LGKGIFGNSYKALLEG---RAPVVVKRLRDLKPLITE-EFRKQLLVIAD-QKHPNLLPLL 330
+G+G FG KA ++ R +KR+++ +F +L V+ HPN++ LL
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 82
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPF----------RCRSRLLVARGVA 380
L ++A +GNL + + + + F + L A VA
Sbjct: 83 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 142
Query: 381 RALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS---SLVAQPIAAQRMI 437
R ++YL +Q IH +L + NIL+ +N + ++D+G S + + + +
Sbjct: 143 RGMDYL-------SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPV 195
Query: 438 SYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQ-GINGADLCSWVLRAVREE 496
+ + E + + SDVWS+G LL E+ +S P G+ A+L + + R E
Sbjct: 196 RWMAIESLNYSVYTTNSDVWSYGVLLWEI----VSLGGTPYCGMTCAELYEKLPQGYRLE 251
Query: 497 WTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
D + R QC + P +RP A+++ L
Sbjct: 252 KPLNCDDEVYDLMR--------------QCWREKPYERPSFAQILVSL 285
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 276 LGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
LGKG FGN Y A + A V+ + + K + + R+++ + + +HPN+L L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
Y+ L+ ++A G ++ + K SK F + +A AL Y H K
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQ--KLSK----FDEQRTATYITELANALSYCHSK-- 130
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPEYQSS 447
VIH ++K N+LL + ++++G+S V P + + + Y PE
Sbjct: 131 -----RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 183
Query: 448 KKISRKSDVWSFGCLLLELLTGR 470
+ K D+WS G L E L G+
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 97/204 (47%), Gaps = 19/204 (9%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYY 333
E LG G G + G V VK L+ + + F + ++ +H L+ L A
Sbjct: 19 ERLGAGQAGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAV- 76
Query: 334 FSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSR 393
+ + ++ ++ NG+L + + + + I L +A +A + ++ ++
Sbjct: 77 VTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIEERN--- 129
Query: 394 TQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV--AQPIA---AQRMISYKSPEYQSSK 448
IH +L++ NIL+ D ++D+G + L+ A+ A A+ I + +PE +
Sbjct: 130 ----YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYG 185
Query: 449 KISRKSDVWSFGCLLLELLT-GRI 471
+ KSDVWSFG LL E++T GRI
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRI 209
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 23/205 (11%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLV-----IADQKHPNLLPLL 330
+G G +G K + ++V + D + E KQ+LV + + KHPN++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAE--KQMLVSEVNLLRELKHPNIV--- 68
Query: 331 AYY-----FSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
YY +N +V ++ G+L + I K +K R L V + AL+
Sbjct: 69 RYYDRIIDRTNTTLYIVMEYCEGGDLASVI--TKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIA-AQRMIS---YKS 441
H + S V+H +LK N+ LD + V + D+G + ++ A+ + Y S
Sbjct: 127 CHRR--SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMS 184
Query: 442 PEYQSSKKISRKSDVWSFGCLLLEL 466
PE + + KSD+WS GCLL EL
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 17/205 (8%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
+GKG FG+ G V VK +++ + F + V+ +H NL+ LL
Sbjct: 20 IGKGEFGDVMLGDYRGNK-VAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 336 NDEKL-LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRT 394
L +V ++ G+L + + S+ R L + V A+EYL +
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLR----SRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---- 128
Query: 395 QSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-ISYKSPEYQSSKKISRK 453
+H +L + N+L+ ++ + VSD+G + + ++ + + +PE S K
Sbjct: 129 ---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAAFSTK 185
Query: 454 SDVWSFGCLLLELLT-GRISTHSAP 477
SDVWSFG LL E+ + GR+ P
Sbjct: 186 SDVWSFGILLWEIYSFGRVPYPRIP 210
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 25/176 (14%)
Query: 323 HPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRI--HGGKSSKNRIPFRCRSRLLVARGVA 380
HPN++ L + LV ++A G +F+ + HG K R++ R +
Sbjct: 72 HPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKE-----ARAKF---RQIV 123
Query: 381 RALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS---SLVAQPIAAQRMI 437
A++Y H Q ++H +LK+ N+LLD + + ++D+GFS + + A
Sbjct: 124 SAVQYCH-------QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAP 176
Query: 438 SYKSPE-YQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRA 492
Y +PE +Q K + DVWS G +L L++G + G N +L VLR
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRG 228
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 14/112 (12%)
Query: 373 LLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIA 432
LL A+ + + YLH + IH NL + N+LLD++ +V + D+G + V +
Sbjct: 120 LLFAQQICEGMAYLHSQH-------YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 172
Query: 433 AQRM-------ISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP 477
R+ + + +PE K SDVWSFG L ELLT S+ S P
Sbjct: 173 YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPP 224
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 14/112 (12%)
Query: 373 LLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIA 432
LL A+ + + YLH + IH NL + N+LLD++ +V + D+G + V +
Sbjct: 120 LLFAQQICEGMAYLHAQH-------YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 172
Query: 433 AQRM-------ISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP 477
R+ + + +PE K SDVWSFG L ELLT S+ S P
Sbjct: 173 YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPP 224
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 131/285 (45%), Gaps = 43/285 (15%)
Query: 276 LGKGIFGNSYKA-LLEGRAPVVVKRL-----RDLKPLIT--EEFRKQLLVIADQKHPNLL 327
+GKG FG +K L++ ++ V +K L +I +EF++++ ++++ HPN++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
L Y ++ +V +F G+L++R+ + I + + RL++ +A +EY+
Sbjct: 87 KL--YGLMHNPPRMVMEFVPCGDLYHRL---LDKAHPIKWSVKLRLML--DIALGIEYMQ 139
Query: 388 HKDKSRTQSAVIHGNLKSTNIL---LDDNEMVL--VSDYGFSSLVAQPIAAQRM-ISYKS 441
+++ ++H +L+S NI LD+N V V+D+G S ++ + +
Sbjct: 140 NQN-----PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMA 194
Query: 442 PEYQSSKKIS--RKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTA 499
PE +++ S K+D +SF +L +LTG G + +REE
Sbjct: 195 PETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK------FINMIREEGLR 248
Query: 500 EIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
+ +L V C + P+KRP + +V EL
Sbjct: 249 PTIPEDCPP---------RLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 125/311 (40%), Gaps = 60/311 (19%)
Query: 276 LGKGIFGNSYKALLEG--------RAPVVVKRLRD------LKPLITE-EFRKQLLVIAD 320
LG+G FG A G V VK L+D L L++E E K +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI----- 97
Query: 321 QKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSK-------NRIP---FRCR 370
KH N++ LL + ++ ++A GNL + + NR+P +
Sbjct: 98 GKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 371 SRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV--- 427
+ +AR +EYL IH +L + N+L+ +N ++ ++D+G + +
Sbjct: 158 DLVSCTYQLARGMEYL-------ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 428 ---AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGAD 484
+ + + + +PE + + +SDVWSFG L+ E+ T S + GI +
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP---GIPVEE 267
Query: 485 LCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
L + R + A+ +L + C + P +RP ++V +L
Sbjct: 268 LFKLLKEGHRMD--------------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
Query: 545 EIIKVTESTEE 555
+ I + EE
Sbjct: 314 DRILTLTTNEE 324
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 113/257 (43%), Gaps = 57/257 (22%)
Query: 257 DEQP--AGFKLNDLLKAPAEGLGKGIFGNSYKA--LLEGRAPVVVKRLRDLKPLITEEFR 312
DEQP ++L LK +GKG F A +L G+ V R+ D L + +
Sbjct: 8 DEQPHIGNYRL---LKT----IGKGNFAKVKLARHILTGKEVAV--RIIDKTQLNSSSLQ 58
Query: 313 K---QLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRI--HGGKSSKNRIPF 367
K ++ ++ HPN++ L + LV ++A G +F+ + HG K
Sbjct: 59 KLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE---- 114
Query: 368 RCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS--- 424
R++ R + A++Y H Q ++H +LK+ N+LLD + + ++D+GFS
Sbjct: 115 -ARAKF---RQIVSAVQYCH-------QKFIVHRDLKAENLLLDADMNIKIADFGFSNEF 163
Query: 425 -------SLVAQPIAAQRMISYKSPE-YQSSKKISRKSDVWSFGCLLLELLTGRISTHSA 476
+ P Y +PE +Q K + DVWS G +L L++G S
Sbjct: 164 TFGNKLDTFCGSP-------PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG-----SL 211
Query: 477 P-QGINGADLCSWVLRA 492
P G N +L VLR
Sbjct: 212 PFDGQNLKELRERVLRG 228
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 124/310 (40%), Gaps = 58/310 (18%)
Query: 276 LGKGIFGNSYKALLEG--------RAPVVVKRLRD------LKPLITEEFRKQLLVIADQ 321
LG+G FG A G V VK L+D L L++E +++
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI----G 87
Query: 322 KHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSK-------NRIP---FRCRS 371
KH N++ LL + ++ ++A GNL + + NR+P +
Sbjct: 88 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 372 RLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV---- 427
+ +AR +EYL IH +L + N+L+ +N ++ ++D+G + +
Sbjct: 148 LVSCTYQLARGMEYL-------ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 200
Query: 428 --AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADL 485
+ + + + +PE + + +SDVWSFG L+ E+ T S + GI +L
Sbjct: 201 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP---GIPVEEL 257
Query: 486 CSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
+ R + A + + R H + P +RP ++V +L+
Sbjct: 258 FKLLKEGHRMDKPANCTNELYMMMRDCWHAV--------------PSQRPTFKQLVEDLD 303
Query: 546 IIKVTESTEE 555
I + EE
Sbjct: 304 RILTLTTNEE 313
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVV-VKRL---RDLKPLITEEFRKQLLVIADQKHPNLLPL 329
E LG+G +G+ YKA+ + +V +K++ DL+ +I K++ ++ P+++
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEII-----KEISIMQQCDSPHVVKY 89
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFN--RIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
YF N + +V ++ G G++ + R+ +++ I +S L + LEYLH
Sbjct: 90 YGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTL-------KGLEYLH 142
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS----YKSPE 443
K IH ++K+ NILL+ ++D+G + + +A + + + +PE
Sbjct: 143 FMRK-------IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPE 195
Query: 444 YQSSKKISRKSDVWSFGCLLLELLTGR 470
+ +D+WS G +E+ G+
Sbjct: 196 VIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 111/249 (44%), Gaps = 41/249 (16%)
Query: 257 DEQP--AGFKLNDLLKAPAEGLGKGIFGNSYKA--LLEGRAPVVVKRLRDLKPLITEEFR 312
DEQP ++L LK +GKG F A +L G+ V R+ D L + +
Sbjct: 8 DEQPHIGNYRL---LKT----IGKGNFAKVKLARHILTGKEVAV--RIIDKTQLNSSSLQ 58
Query: 313 K---QLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRI--HGGKSSKNRIPF 367
K ++ ++ HPN++ L + LV ++A G +F+ + HG K
Sbjct: 59 KLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE---- 114
Query: 368 RCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV 427
R++ R + A++Y H Q ++H +LK+ N+LLD + + ++D+GFS+
Sbjct: 115 -ARAKF---RQIVSAVQYCH-------QKFIVHRDLKAENLLLDADMNIKIADFGFSNEF 163
Query: 428 AQPIAAQRMIS---YKSPE-YQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGA 483
Y +PE +Q K + DVWS G +L L++G + G N
Sbjct: 164 TFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF----DGQNLK 219
Query: 484 DLCSWVLRA 492
+L VLR
Sbjct: 220 ELRERVLRG 228
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 127/299 (42%), Gaps = 53/299 (17%)
Query: 276 LGKGIFGNSYKALLEG------RAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPL 329
LG+G FG+ + L+ + V +L + EEF + + D HPN++ L
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 330 LAYYFSNDEK-----LLVYKFAGNGNL-----FNRIHGGKSSKNRIPFRCRSRLLVARGV 379
L + +++ F G+L ++R+ G IP + + +V +
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGP---KHIPLQTLLKFMV--DI 156
Query: 380 ARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV------AQPIAA 433
A +EYL +++ +H +L + N +L D+ V V+D+G S + Q A
Sbjct: 157 ALGMEYLSNRN-------FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIA 209
Query: 434 QRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ + + + E + + + KSDVW+FG + E+ T ++ + G+ ++ ++L
Sbjct: 210 KMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYP---GVQNHEMYDYLLHGH 266
Query: 494 REEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTES 552
R + + D +L ++ C P RP + V L++ K+ ES
Sbjct: 267 RLKQPEDCLD--------------ELYEIMYSCWRTDPLDRPTFS--VLRLQLEKLLES 309
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 124/310 (40%), Gaps = 58/310 (18%)
Query: 276 LGKGIFGNSYKALLEG--------RAPVVVKRLRD------LKPLITEEFRKQLLVIADQ 321
LG+G FG A G V VK L+D L L++E +++
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI----G 90
Query: 322 KHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSK-------NRIP---FRCRS 371
KH N++ LL + ++ ++A GNL + + NR+P +
Sbjct: 91 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 372 RLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV---- 427
+ +AR +EYL IH +L + N+L+ +N ++ ++D+G + +
Sbjct: 151 LVSCTYQLARGMEYL-------ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 203
Query: 428 --AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADL 485
+ + + + +PE + + +SDVWSFG L+ E+ T S + GI +L
Sbjct: 204 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP---GIPVEEL 260
Query: 486 CSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
+ R + A + + R H + P +RP ++V +L+
Sbjct: 261 FKLLKEGHRMDKPANCTNELYMMMRDCWHAV--------------PSQRPTFKQLVEDLD 306
Query: 546 IIKVTESTEE 555
I + EE
Sbjct: 307 RILTLTTNEE 316
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEF--RKQLLVIADQKHPNLLPLLA 331
E +GKG FG +K + VV ++ DL+ E ++++ V++ P +
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
Y + + ++ ++ G G+ + + G + +I + R + + L+YLH + K
Sbjct: 93 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-------TILREILKGLDYLHSEKK 145
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSS-LVAQPIAAQRMIS---YKSPEYQSS 447
IH ++K+ N+LL ++ V ++D+G + L I + + +PE
Sbjct: 146 -------IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQ 198
Query: 448 KKISRKSDVWSFGCLLLELLTGR 470
K+D+WS G +EL G
Sbjct: 199 SAYDSKADIWSLGITAIELARGE 221
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 25/176 (14%)
Query: 323 HPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRI--HGGKSSKNRIPFRCRSRLLVARGVA 380
HPN++ L + LV ++A G +F+ + HG K R++ R +
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE-----ARAKF---RQIV 123
Query: 381 RALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS---SLVAQPIAAQRMI 437
A++Y H Q ++H +LK+ N+LLD + + ++D+GFS + + A
Sbjct: 124 SAVQYCH-------QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAP 176
Query: 438 SYKSPE-YQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRA 492
Y +PE +Q K + DVWS G +L L++G + G N +L VLR
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF----DGQNLKELRERVLRG 228
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 125/310 (40%), Gaps = 58/310 (18%)
Query: 276 LGKGIFGNSYKALLEG--------RAPVVVKRLRD------LKPLITEEFRKQLLVIADQ 321
LG+G FG A G V VK L+D L L++E +++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI----G 98
Query: 322 KHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSK-------NRIP---FRCRS 371
KH N++ LL + ++ ++A GNL + + NR+P +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 372 RLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV---- 427
+ +AR +EYL IH +L + N+L+ +N ++ ++D+G + +
Sbjct: 159 LVSCTYQLARGMEYL-------ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNID 211
Query: 428 --AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADL 485
+ + + + +PE + + +SDVWSFG L+ E+ T S + GI +L
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP---GIPVEEL 268
Query: 486 CSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
+ R + A+ +L + C + P +RP ++V +L+
Sbjct: 269 FKLLKEGHRMD--------------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
Query: 546 IIKVTESTEE 555
I + EE
Sbjct: 315 RILTLTTNEE 324
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 34/211 (16%)
Query: 276 LGKGIFGN----SYKALLEGR-APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPL- 329
LGKG FG+ Y L + A V VK+L+ P +F++++ ++ ++
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 330 -LAYYFSNDEKLLVYKFAGNGNL--FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYL 386
++Y E LV ++ +G L F + H + +R+ LL + + + +EYL
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRL-------LLYSSQICKGMEYL 127
Query: 387 HHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSL---------VAQPIAAQRMI 437
+ +H +L + NIL++ V ++D+G + L V +P Q I
Sbjct: 128 GSR-------RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREP--GQSPI 178
Query: 438 SYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
+ +PE S SR+SDVWSFG +L EL T
Sbjct: 179 FWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 91/202 (45%), Gaps = 20/202 (9%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEF--RKQLLVIADQKHPNLLPLLA 331
E +GKG FG +K + VV ++ DL+ E ++++ V++ P +
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
Y + + ++ ++ G G+ + + G + +I + R + + L+YLH + K
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQI-------ATILREILKGLDYLHSEKK 140
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSS-LVAQPIAAQRMIS---YKSPEYQSS 447
IH ++K+ N+LL ++ V ++D+G + L I + + +PE
Sbjct: 141 -------IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQ 193
Query: 448 KKISRKSDVWSFGCLLLELLTG 469
K+D+WS G +EL G
Sbjct: 194 SAYDSKADIWSLGITAIELARG 215
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 124/311 (39%), Gaps = 60/311 (19%)
Query: 276 LGKGIFGNSYKALLEG--------RAPVVVKRLRD------LKPLITE-EFRKQLLVIAD 320
LG+G FG A G V VK L+D L L++E E K +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI----- 97
Query: 321 QKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSK-------NRIP---FRCR 370
KH N++ LL + ++ ++A GNL + + NR+P +
Sbjct: 98 GKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 371 SRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV--- 427
+ +AR +EYL IH +L + N+L+ +N ++ ++D+G + +
Sbjct: 158 DLVSCTYQLARGMEYL-------ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 428 ---AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGAD 484
+ + + + +PE + + +SDVWSFG L+ E+ T S + GI +
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP---GIPVEE 267
Query: 485 LCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
L + R + A + + R C + P +RP ++V +L
Sbjct: 268 LFKLLKEGHRMDKPANCTNELYMMMRD--------------CWHAVPSQRPTFKQLVEDL 313
Query: 545 EIIKVTESTEE 555
+ I + EE
Sbjct: 314 DRILTLTTNEE 324
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 125/310 (40%), Gaps = 58/310 (18%)
Query: 276 LGKGIFGNSYKALLEG--------RAPVVVKRLRD------LKPLITEEFRKQLLVIADQ 321
LG+G FG A G V VK L+D L L++E +++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMI----G 98
Query: 322 KHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSK-------NRIP---FRCRS 371
KH N++ LL + ++ ++A GNL + + NR+P +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 372 RLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV---- 427
+ +AR +EYL IH +L + N+L+ +N ++ ++D+G + +
Sbjct: 159 LVSCTYQLARGMEYL-------ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 428 --AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADL 485
+ + + + +PE + + +SDVWSFG L+ E+ T S + GI +L
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP---GIPVEEL 268
Query: 486 CSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
+ R + A+ +L + C + P +RP ++V +L+
Sbjct: 269 FKLLKEGHRMD--------------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
Query: 546 IIKVTESTEE 555
I + EE
Sbjct: 315 RILTLTTNEE 324
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 127/312 (40%), Gaps = 61/312 (19%)
Query: 276 LGKGIFGNSYKALLEG--------RAPVVVKRLRD------LKPLITE-EFRKQLLVIAD 320
LG+G FG A G V VK L+D L L++E E K +
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI----- 143
Query: 321 QKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSK-------NRIP---FRCR 370
KH N++ LL + ++ ++A GNL + + NR+P +
Sbjct: 144 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 203
Query: 371 SRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV--- 427
+ +AR +EYL IH +L + N+L+ +N ++ ++D+G + +
Sbjct: 204 DLVSCTYQLARGMEYL-------ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 256
Query: 428 ---AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGAD 484
+ + + + +PE + + +SDVWSFG L+ E+ T S + GI +
Sbjct: 257 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP---GIPVEE 313
Query: 485 LCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
L + R + A + + R H + P +RP ++V +L
Sbjct: 314 LFKLLKEGHRMDKPANCTNELYMMMRDCWHAV--------------PSQRPTFKQLVEDL 359
Query: 545 EIIKVTESTEEE 556
+ I +T +T EE
Sbjct: 360 DRI-LTLTTNEE 370
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 91/202 (45%), Gaps = 20/202 (9%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEF--RKQLLVIADQKHPNLLPLLA 331
E +GKG FG +K + VV ++ DL+ E ++++ V++ P +
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
Y + + ++ ++ G G+ + + G + +I + R + + L+YLH + K
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-------TILREILKGLDYLHSEKK 125
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSS-LVAQPIAAQRMIS---YKSPEYQSS 447
IH ++K+ N+LL ++ V ++D+G + L I + + +PE
Sbjct: 126 -------IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQ 178
Query: 448 KKISRKSDVWSFGCLLLELLTG 469
K+D+WS G +EL G
Sbjct: 179 SAYDSKADIWSLGITAIELARG 200
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 125/315 (39%), Gaps = 60/315 (19%)
Query: 276 LGKGIFGNSYKALLEG--------RAPVVVKRLRD------LKPLITE-EFRKQLLVIAD 320
LG+G FG A G V VK L+D L L++E E K +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI----- 97
Query: 321 QKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSK-------NRIP---FRCR 370
KH N++ LL + ++ ++A GNL + + NR+P +
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFK 157
Query: 371 SRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV--- 427
+ +AR +EYL IH +L + N+L+ +N ++ ++D+G + +
Sbjct: 158 DLVSCTYQLARGMEYL-------ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 428 ---AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGAD 484
+ + + + +PE + + +SDVWSFG L+ E+ T S + GI +
Sbjct: 211 DXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP---GIPVEE 267
Query: 485 LCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
L + R + A + + R H + P +RP ++V +L
Sbjct: 268 LFKLLKEGHRMDKPANCTNELYMMMRDCWHAV--------------PSQRPTFKQLVEDL 313
Query: 545 EIIKVTESTEEEEDF 559
+ I + EE D
Sbjct: 314 DRILTLTTNEEYLDL 328
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 125/315 (39%), Gaps = 60/315 (19%)
Query: 276 LGKGIFGNSYKALLEG--------RAPVVVKRLRD------LKPLITE-EFRKQLLVIAD 320
LG+G FG A G V VK L+D L L++E E K +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI----- 97
Query: 321 QKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSK-------NRIP---FRCR 370
KH N++ LL + ++ ++A GNL + + NR+P +
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 371 SRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV--- 427
+ +AR +EYL IH +L + N+L+ +N ++ ++D+G + +
Sbjct: 158 DLVSCTYQLARGMEYL-------ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 428 ---AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGAD 484
+ + + + +PE + + +SDVWSFG L+ E+ T S + GI +
Sbjct: 211 DXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP---GIPVEE 267
Query: 485 LCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
L + R + A + + R C + P +RP ++V +L
Sbjct: 268 LFKLLKEGHRMDKPANCTNELYMMMRD--------------CWHAVPSQRPTFKQLVEDL 313
Query: 545 EIIKVTESTEEEEDF 559
+ I + EE D
Sbjct: 314 DRILTLTTNEEYLDL 328
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 91/202 (45%), Gaps = 20/202 (9%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEF--RKQLLVIADQKHPNLLPLLA 331
E +GKG FG +K + VV ++ DL+ E ++++ V++ P +
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
Y + + ++ ++ G G+ + + G + +I + R + + L+YLH + K
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-------TILREILKGLDYLHSEKK 125
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSS-LVAQPIAAQRMIS---YKSPEYQSS 447
IH ++K+ N+LL ++ V ++D+G + L I + + +PE
Sbjct: 126 -------IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQ 178
Query: 448 KKISRKSDVWSFGCLLLELLTG 469
K+D+WS G +EL G
Sbjct: 179 SAYDSKADIWSLGITAIELARG 200
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 41/184 (22%)
Query: 323 HPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRI--HGGKSSKNRIPFRCRSRLLVARGVA 380
HPN++ L + LV ++A G +F+ + HG K R++ R +
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE-----ARAKF---RQIV 123
Query: 381 RALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS----------SLVAQP 430
A++Y H Q ++H +LK+ N+LLD + + ++D+GFS + P
Sbjct: 124 SAVQYCH-------QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSP 176
Query: 431 IAAQRMISYKSPE-YQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP-QGINGADLCSW 488
Y +PE +Q K + DVWS G +L L++G S P G N +L
Sbjct: 177 -------PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFDGQNLKELRER 224
Query: 489 VLRA 492
VLR
Sbjct: 225 VLRG 228
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 39/183 (21%)
Query: 323 HPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRI--HGGKSSKNRIPFRCRSRLLVARGVA 380
HPN++ L + LV ++A G +F+ + HG K R++ R +
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE-----ARAKF---RQIV 123
Query: 381 RALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS----------SLVAQP 430
A++Y H Q ++H +LK+ N+LLD + + ++D+GFS + P
Sbjct: 124 SAVQYCH-------QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSP 176
Query: 431 IAAQRMISYKSPE-YQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWV 489
Y +PE +Q K + DVWS G +L L++G + G N +L V
Sbjct: 177 -------PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF----DGQNLKELRERV 225
Query: 490 LRA 492
LR
Sbjct: 226 LRG 228
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 45/208 (21%)
Query: 359 KSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLV 418
K ++R P C + L + RA++++H R + +IH +LK N+LL + + +
Sbjct: 125 KKMESRGPLSCDTVLKIFYQTCRAVQHMH-----RQKPPIIHRDLKVENLLLSNQGTIKL 179
Query: 419 SDYGFSS----------------LVAQPIAAQRMISYKSPE---YQSSKKISRKSDVWSF 459
D+G ++ LV + I Y++PE S+ I K D+W+
Sbjct: 180 CDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWAL 239
Query: 460 GCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKL 519
GC+L L H G LR V +++ D++ +V S ML++
Sbjct: 240 GCILYLLC---FRQHPFEDGAK--------LRIVNGKYSIPPHDTQYTVFHSLIRAMLQV 288
Query: 520 LQVAIQCCNKSPEKRPEMAEVVSELEII 547
+PE+R +AEVV +L+ I
Sbjct: 289 ----------NPEERLSIAEVVHQLQEI 306
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 41/184 (22%)
Query: 323 HPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRI--HGGKSSKNRIPFRCRSRLLVARGVA 380
HPN++ L + LV ++A G +F+ + HG K R++ R +
Sbjct: 65 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKE-----ARAKF---RQIV 116
Query: 381 RALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS----------SLVAQP 430
A++Y H Q ++H +LK+ N+LLD + + ++D+GFS + P
Sbjct: 117 SAVQYCH-------QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSP 169
Query: 431 IAAQRMISYKSPE-YQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP-QGINGADLCSW 488
Y +PE +Q K + DVWS G +L L++G S P G N +L
Sbjct: 170 -------PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFDGQNLKELRER 217
Query: 489 VLRA 492
VLR
Sbjct: 218 VLRG 221
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 131/285 (45%), Gaps = 43/285 (15%)
Query: 276 LGKGIFGNSYKA-LLEGRAPVVVKRL-----RDLKPLIT--EEFRKQLLVIADQKHPNLL 327
+GKG FG +K L++ ++ V +K L +I +EF++++ ++++ HPN++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
L Y ++ +V +F G+L++R+ + I + + RL++ +A +EY+
Sbjct: 87 KL--YGLMHNPPRMVMEFVPCGDLYHRL---LDKAHPIKWSVKLRLML--DIALGIEYMQ 139
Query: 388 HKDKSRTQSAVIHGNLKSTNIL---LDDNEMVL--VSDYGFSSLVAQPIAAQRM-ISYKS 441
+++ ++H +L+S NI LD+N V V+D+G S ++ + +
Sbjct: 140 NQN-----PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMA 194
Query: 442 PEYQSSKKIS--RKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTA 499
PE +++ S K+D +SF +L +LTG G + +REE
Sbjct: 195 PETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK------FINMIREEGLR 248
Query: 500 EIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
+ +L V C + P+KRP + +V EL
Sbjct: 249 PTIPEDCPP---------RLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 30/205 (14%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLIT-EEFRKQLLVIADQKHPNLLPLL-AYY 333
LG G FG YKA + + + ++ D K E++ ++ ++A HPN++ LL A+Y
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 334 FSNDEKLLVYKFAGNGNLFNRIHGGKS-SKNRIPFRCRSRLLVARGVARALEYLHHKDKS 392
+ N+ +L+ AG + + ++++I C+ L AL YLH
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL-------DALNYLH----- 152
Query: 393 RTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYKSPEYQSSKKI-- 450
+ +IH +LK+ NIL + + ++D+G S+ + I QR S+ Y + ++
Sbjct: 153 --DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI--QRRDSFIGTPYWMAPEVVM 208
Query: 451 ---------SRKSDVWSFGCLLLEL 466
K+DVWS G L+E+
Sbjct: 209 CETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 124/310 (40%), Gaps = 58/310 (18%)
Query: 276 LGKGIFGNSYKALLEG--------RAPVVVKRLRD------LKPLITEEFRKQLLVIADQ 321
LG+G FG A G V VK L+D L L++E +++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI----G 98
Query: 322 KHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSK-------NRIP---FRCRS 371
KH N++ LL + ++ ++A GNL + + NR+P +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 372 RLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV---- 427
+ +AR +EYL IH +L + N+L+ +N ++ ++D+G + +
Sbjct: 159 LVSCTYQLARGMEYL-------ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 428 --AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADL 485
+ + + +PE + + +SDVWSFG L+ E+ T S + GI +L
Sbjct: 212 YYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP---GIPVEEL 268
Query: 486 CSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
+ R + A+ +L + C + P +RP ++V +L+
Sbjct: 269 FKLLKEGHRMD--------------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
Query: 546 IIKVTESTEE 555
I + EE
Sbjct: 315 RILTLTTNEE 324
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 129/315 (40%), Gaps = 60/315 (19%)
Query: 276 LGKGIFGNSYKAL---LEGRAP-----VVVKRLR------DLKPLITE-EFRKQLLVIAD 320
LG+G FG A L+ P V VK L+ DL LI+E E K +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI----- 90
Query: 321 QKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPF--------RCRSR 372
KH N++ LL + ++ ++A GNL + + F + S+
Sbjct: 91 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSK 150
Query: 373 LLV--ARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP 430
LV A VAR +EYL K IH +L + N+L+ ++ ++ ++D+G + +
Sbjct: 151 DLVSCAYQVARGMEYLASK-------KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 203
Query: 431 IAAQRM------ISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGAD 484
++ + + +PE + + +SDVWSFG LL E+ T S + G+ +
Sbjct: 204 DXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP---GVPVEE 260
Query: 485 LCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
L + R + + + + R C + P +RP ++V +L
Sbjct: 261 LFKLLKEGHRMDKPSNCTNELYMMMRD--------------CWHAVPSQRPTFKQLVEDL 306
Query: 545 EIIKVTESTEEEEDF 559
+ I S +E D
Sbjct: 307 DRIVALTSNQEXLDL 321
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 126/312 (40%), Gaps = 61/312 (19%)
Query: 276 LGKGIFGNSYKALLEG--------RAPVVVKRLRD------LKPLITE-EFRKQLLVIAD 320
LG+G FG A G V VK L+D L L++E E K +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI----- 97
Query: 321 QKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSK-------NRIP---FRCR 370
KH N++ LL + ++ +A GNL + + NR+P +
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 371 SRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV--- 427
+ +AR +EYL IH +L + N+L+ +N ++ ++D+G + +
Sbjct: 158 DLVSCTYQLARGMEYL-------ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 428 ---AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGAD 484
+ + + + +PE + + +SDVWSFG L+ E+ T S + GI +
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP---GIPVEE 267
Query: 485 LCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
L + R + A + + R C + P +RP ++V +L
Sbjct: 268 LFKLLKEGHRMDKPANCTNELYMMMRD--------------CWHAVPSQRPTFKQLVEDL 313
Query: 545 EIIKVTESTEEE 556
+ I +T +T EE
Sbjct: 314 DRI-LTLTTNEE 324
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 14/112 (12%)
Query: 373 LLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIA 432
LL A+ + + YLH + IH +L + N+LLD++ +V + D+G + V +
Sbjct: 137 LLFAQQICEGMAYLHAQH-------YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 189
Query: 433 AQRM-------ISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP 477
R+ + + +PE K SDVWSFG L ELLT S+ S P
Sbjct: 190 XYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPP 241
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 127/311 (40%), Gaps = 59/311 (18%)
Query: 276 LGKGIFGNSYKALLEG--------RAPVVVKRLRD------LKPLITEEFRKQLLVIADQ 321
LG+G FG A G V VK L+D L L++E +++
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI----G 85
Query: 322 KHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSK-------NRIP---FRCRS 371
KH N++ LL + ++ ++A GNL + + NR+P +
Sbjct: 86 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 372 RLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV---- 427
+ +AR +EYL IH +L + N+L+ +N ++ ++D+G + +
Sbjct: 146 LVSCTYQLARGMEYL-------ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNID 198
Query: 428 --AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADL 485
+ + + + +PE + + +SDVWSFG L+ E+ T S + GI +L
Sbjct: 199 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP---GIPVEEL 255
Query: 486 CSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
+ R + A + + R H + P +RP ++V +L+
Sbjct: 256 FKLLKEGHRMDKPANCTNELYMMMRDCWHAV--------------PSQRPTFKQLVEDLD 301
Query: 546 IIKVTESTEEE 556
I +T +T +E
Sbjct: 302 RI-LTLTTNQE 311
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 30/205 (14%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLIT-EEFRKQLLVIADQKHPNLLPLL-AYY 333
LG G FG YKA + + + ++ D K E++ ++ ++A HPN++ LL A+Y
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 334 FSNDEKLLVYKFAGNGNLFNRIHGGKS-SKNRIPFRCRSRLLVARGVARALEYLHHKDKS 392
+ N+ +L+ AG + + ++++I C+ L AL YLH
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL-------DALNYLH----- 152
Query: 393 RTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYKSPEYQSSKKI-- 450
+ +IH +LK+ NIL + + ++D+G S+ + I QR S+ Y + ++
Sbjct: 153 --DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXI--QRRDSFIGTPYWMAPEVVM 208
Query: 451 ---------SRKSDVWSFGCLLLEL 466
K+DVWS G L+E+
Sbjct: 209 CETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 123/311 (39%), Gaps = 60/311 (19%)
Query: 276 LGKGIFGNSYKALLEG--------RAPVVVKRLRD------LKPLITE-EFRKQLLVIAD 320
LG+G FG A G V VK L+D L L++E E K +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI----- 97
Query: 321 QKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSK-------NRIP---FRCR 370
KH N++ LL + ++ +A GNL + + NR+P +
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 371 SRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV--- 427
+ +AR +EYL IH +L + N+L+ +N ++ ++D+G + +
Sbjct: 158 DLVSCTYQLARGMEYL-------ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 428 ---AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGAD 484
+ + + + +PE + + +SDVWSFG L+ E+ T S + GI +
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP---GIPVEE 267
Query: 485 LCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
L + R + A + + R C + P +RP ++V +L
Sbjct: 268 LFKLLKEGHRMDKPANCTNELYMMMRD--------------CWHAVPSQRPTFKQLVEDL 313
Query: 545 EIIKVTESTEE 555
+ I + EE
Sbjct: 314 DRILTLTTNEE 324
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 24/157 (15%)
Query: 323 HPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARA 382
HP+++ L+ Y S+ LV+ G LF+ + ++ + + R + A
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYL------TEKVALSEKETRSIMRSLLEA 212
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI----S 438
+ +LH + ++H +LK NILLDDN + +SD+GFS + +P R +
Sbjct: 213 VSFLHANN-------IVHRDLKPENILLDDNMQIRLSDFGFSCHL-EPGEKLRELCGTPG 264
Query: 439 YKSPEY------QSSKKISRKSDVWSFGCLLLELLTG 469
Y +PE ++ ++ D+W+ G +L LL G
Sbjct: 265 YLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 29/213 (13%)
Query: 274 EGLGKGIFGNSYKALLE--------GRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPN 325
E LG+G F +K + V++K L +E F + +++ H +
Sbjct: 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 326 LLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
L+ F DE +LV +F G+L + K+ N + +L VA+ +A A+ +
Sbjct: 74 LVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINIL-----WKLEVAKQLAWAMHF 128
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNE--------MVLVSDYGFSSLVAQPIAAQRMI 437
L ++ +IHGN+ + NILL E + +SD G S V Q I
Sbjct: 129 LE-------ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERI 181
Query: 438 SYKSPE-YQSSKKISRKSDVWSFGCLLLELLTG 469
+ PE ++ K ++ +D WSFG L E+ +G
Sbjct: 182 PWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 96/204 (47%), Gaps = 20/204 (9%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLR-DLKPL-ITEEFRKQLLVIADQKHPNLLPLLA 331
E +G+G +G YKA V +KR+R D + I +++ ++ + HPN++ L+
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
S LV++F +L + K+ + L+ RGVA
Sbjct: 87 VIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLL-RGVAHC--------- 135
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPEY-QS 446
Q ++H +LK N+L++ + + ++D+G + P+ + + Y++P+
Sbjct: 136 --HQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMG 193
Query: 447 SKKISRKSDVWSFGCLLLELLTGR 470
SKK S D+WS GC+ E++TG+
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 31/210 (14%)
Query: 276 LGKGIFGNSYKALLEGRAPVV-VKRLRDLKPLITEEFRKQLL----VIADQKHPNLLPLL 330
+G G G +K V+ VK++R + EE ++ L+ V+ P ++
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMR--RSGNKEENKRILMDLDVVLKSHDCPYIVQCF 90
Query: 331 AYYFSNDEKLLVYKFAGNG--NLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
+ +N + + + G L R+ G IP R ++ VA + +AL YL
Sbjct: 91 GTFITNTDVFIAMELMGTCAEKLKKRMQG------PIPERILGKMTVA--IVKALYYLKE 142
Query: 389 KDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR---MISYKSPEYQ 445
K VIH ++K +NILLD+ + + D+G S + A R +Y +PE
Sbjct: 143 K------HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERI 196
Query: 446 SSKKISR-----KSDVWSFGCLLLELLTGR 470
++ ++DVWS G L+EL TG+
Sbjct: 197 DPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 96/204 (47%), Gaps = 20/204 (9%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLR-DLKPL-ITEEFRKQLLVIADQKHPNLLPLLA 331
E +G+G +G YKA V +KR+R D + I +++ ++ + HPN++ L+
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
S LV++F +L + K+ + L+ RGVA
Sbjct: 87 VIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLL-RGVAHC--------- 135
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE-YQS 446
Q ++H +LK N+L++ + + ++D+G + P+ + + Y++P+
Sbjct: 136 --HQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMG 193
Query: 447 SKKISRKSDVWSFGCLLLELLTGR 470
SKK S D+WS GC+ E++TG+
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 28/214 (13%)
Query: 276 LGKGIFGNSYKALLEGRAP------VVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPL 329
LG+G FG + A P V VK L++ ++F+++ ++ +H +++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 330 LAYYFSNDEKLLVYKFAGNGNL--FNRIHG-------GKSSKNRIPFRCRSRLLVARGVA 380
L+V+++ +G+L F R HG G P L VA VA
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 381 RALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP----IAAQRM 436
+ YL +H +L + N L+ +V + D+G S + + + M
Sbjct: 169 AGMVYL-------AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 221
Query: 437 --ISYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
I + PE +K + +SDVWSFG +L E+ T
Sbjct: 222 LPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 28/214 (13%)
Query: 276 LGKGIFGNSYKALLEGRAP------VVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPL 329
LG+G FG + A P V VK L++ ++F+++ ++ +H +++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 330 LAYYFSNDEKLLVYKFAGNGNL--FNRIHG-------GKSSKNRIPFRCRSRLLVARGVA 380
L+V+++ +G+L F R HG G P L VA VA
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 381 RALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP----IAAQRM 436
+ YL +H +L + N L+ +V + D+G S + + + M
Sbjct: 140 AGMVYL-------AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 192
Query: 437 --ISYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
I + PE +K + +SDVWSFG +L E+ T
Sbjct: 193 LPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 34/211 (16%)
Query: 276 LGKGIFGN----SYKALLEGR-APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPL- 329
LGKG FG+ Y L + A V VK+L+ P +F++++ ++ ++
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 330 -LAYYFSNDEKLLVYKFAGNGNL--FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYL 386
++Y LV ++ +G L F + H + +R+ LL + + + +EYL
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRL-------LLYSSQICKGMEYL 131
Query: 387 HHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSL---------VAQPIAAQRMI 437
+ +H +L + NIL++ V ++D+G + L V +P Q I
Sbjct: 132 GSR-------RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREP--GQSPI 182
Query: 438 SYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
+ +PE S SR+SDVWSFG +L EL T
Sbjct: 183 FWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 34/211 (16%)
Query: 276 LGKGIFGN----SYKALLEGR-APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPL- 329
LGKG FG+ Y L + A V VK+L+ P +F++++ ++ ++
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 330 -LAYYFSNDEKLLVYKFAGNGNL--FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYL 386
++Y LV ++ +G L F + H + +R+ LL + + + +EYL
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRL-------LLYSSQICKGMEYL 130
Query: 387 HHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSL---------VAQPIAAQRMI 437
+ +H +L + NIL++ V ++D+G + L V +P Q I
Sbjct: 131 GSR-------RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREP--GQSPI 181
Query: 438 SYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
+ +PE S SR+SDVWSFG +L EL T
Sbjct: 182 FWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 28/214 (13%)
Query: 276 LGKGIFGNSYKALLEGRAP------VVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPL 329
LG+G FG + A P V VK L++ ++F+++ ++ +H +++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 330 LAYYFSNDEKLLVYKFAGNGNL--FNRIHG-------GKSSKNRIPFRCRSRLLVARGVA 380
L+V+++ +G+L F R HG G P L VA VA
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 381 RALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP----IAAQRM 436
+ YL +H +L + N L+ +V + D+G S + + + M
Sbjct: 146 AGMVYL-------AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 198
Query: 437 --ISYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
I + PE +K + +SDVWSFG +L E+ T
Sbjct: 199 LPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 34/211 (16%)
Query: 276 LGKGIFGN----SYKALLEGR-APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPL- 329
LGKG FG+ Y L + A V VK+L+ P +F++++ ++ ++
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 330 -LAYYFSNDEKLLVYKFAGNGNL--FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYL 386
++Y LV ++ +G L F + H + +R+ LL + + + +EYL
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRL-------LLYSSQICKGMEYL 143
Query: 387 HHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSL---------VAQPIAAQRMI 437
+ +H +L + NIL++ V ++D+G + L V +P Q I
Sbjct: 144 GSR-------RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREP--GQSPI 194
Query: 438 SYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
+ +PE S SR+SDVWSFG +L EL T
Sbjct: 195 FWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 124/292 (42%), Gaps = 40/292 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRLRDLKPL----ITEEFRKQLLVIADQKHPNLLPLL 330
+G+G FG+ ++ + + P + ++ K + E+F ++ L + HP+++ L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
+ + ++ + G L + + K S + S +L A ++ AL YL K
Sbjct: 75 GV-ITENPVWIIMELCTLGELRSFLQVRKYSLD-----LASLILYAYQLSTALAYLESK- 127
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS-----SLVAQPIAAQRMISYKSPEYQ 445
+H ++ + N+L+ N+ V + D+G S S + + I + +PE
Sbjct: 128 ------RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 181
Query: 446 SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSE 505
+ ++ + SDVW FG + E+L + QG+ D+ + R
Sbjct: 182 NFRRFTSASDVWMFGVCMWEILMHGVKPF---QGVKNNDVIGRIENGER----------- 227
Query: 506 ISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTESTEEEE 557
+ + + + L+ +C P +RP E+ ++L I E ++EE
Sbjct: 228 LPMPPNCPPTLYSLM---TKCWAYDPSRRPRFTELKAQLSTILEEEKAQQEE 276
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 116/276 (42%), Gaps = 38/276 (13%)
Query: 276 LGKGIFGNSYKALLEGRAP---VVVKRL-RDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
LG G FG+ + L+E R+ V+K + +D + E+ ++ V+ HPN++ +
Sbjct: 30 LGSGAFGDVH--LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFE 87
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
+ +V + G L RI ++ + + L+ + + AL Y H +
Sbjct: 88 VFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELM--KQMMNALAYFHSQH- 144
Query: 392 SRTQSAVIHGNLKSTNILLDD---NEMVLVSDYGFSSLVA---QPIAAQRMISYKSPEYQ 445
V+H +LK NIL D + + + D+G + L A Y +PE
Sbjct: 145 ------VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEV- 197
Query: 446 SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSE 505
+ ++ K D+WS G ++ LLTG + G L +A +E +
Sbjct: 198 FKRDVTFKCDIWSAGVVMYFLLTGCLP-------FTGTSLEEVQQKATYKEPNYAVECRP 250
Query: 506 ISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVV 541
++ Q A +LK Q K PE+RP A+V+
Sbjct: 251 LTPQ---AVDLLK------QMLTKDPERRPSAAQVL 277
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 127/285 (44%), Gaps = 43/285 (15%)
Query: 276 LGKGIFGNSYKA-LLEGRAPVVVKRL-----RDLKPLIT--EEFRKQLLVIADQKHPNLL 327
+GKG FG +K L++ ++ V +K L +I +EF++++ ++++ HPN++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
L Y ++ +V +F G+L++R+ P + +L + +A +EY+
Sbjct: 87 KL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAH-----PIKWSVKLRLMLDIALGIEYMQ 139
Query: 388 HKDKSRTQSAVIHGNLKSTNIL---LDDNEMVL--VSDYGFSSLVAQPIAAQRM-ISYKS 441
+++ ++H +L+S NI LD+N V V+D+ S ++ + +
Sbjct: 140 NQN-----PPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMA 194
Query: 442 PEYQSSKKIS--RKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTA 499
PE +++ S K+D +SF +L +LTG G + +REE
Sbjct: 195 PETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK------FINMIREEGLR 248
Query: 500 EIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
+ +L V C + P+KRP + +V EL
Sbjct: 249 PTIPEDCPP---------RLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 124/292 (42%), Gaps = 40/292 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRLRDLKPL----ITEEFRKQLLVIADQKHPNLLPLL 330
+G+G FG+ ++ + + P + ++ K + E+F ++ L + HP+++ L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
+ + ++ + G L + + K S + S +L A ++ AL YL K
Sbjct: 81 GV-ITENPVWIIMELCTLGELRSFLQVRKYSLD-----LASLILYAYQLSTALAYLESK- 133
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS-----SLVAQPIAAQRMISYKSPEYQ 445
+H ++ + N+L+ N+ V + D+G S S + + I + +PE
Sbjct: 134 ------RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 187
Query: 446 SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSE 505
+ ++ + SDVW FG + E+L + QG+ D+ + R
Sbjct: 188 NFRRFTSASDVWMFGVCMWEILMHGVKPF---QGVKNNDVIGRIENGER----------- 233
Query: 506 ISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTESTEEEE 557
+ + + + L+ +C P +RP E+ ++L I E ++EE
Sbjct: 234 LPMPPNCPPTLYSLM---TKCWAYDPSRRPRFTELKAQLSTILEEEKAQQEE 282
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 124/292 (42%), Gaps = 40/292 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRLRDLKPL----ITEEFRKQLLVIADQKHPNLLPLL 330
+G+G FG+ ++ + + P + ++ K + E+F ++ L + HP+++ L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
+ + ++ + G L + + K S + S +L A ++ AL YL K
Sbjct: 80 GV-ITENPVWIIMELCTLGELRSFLQVRKYSLD-----LASLILYAYQLSTALAYLESK- 132
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS-----SLVAQPIAAQRMISYKSPEYQ 445
+H ++ + N+L+ N+ V + D+G S S + + I + +PE
Sbjct: 133 ------RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 186
Query: 446 SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSE 505
+ ++ + SDVW FG + E+L + QG+ D+ + R
Sbjct: 187 NFRRFTSASDVWMFGVCMWEILMHGVKPF---QGVKNNDVIGRIENGER----------- 232
Query: 506 ISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTESTEEEE 557
+ + + + L+ +C P +RP E+ ++L I E ++EE
Sbjct: 233 LPMPPNCPPTLYSLM---TKCWAYDPSRRPRFTELKAQLSTILEEEKAQQEE 281
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 26/203 (12%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLIT-EEFRKQLLVIADQKHPNLLPLL-AYY 333
LG G FG YKA + + + ++ D K E++ ++ ++A HPN++ LL A+Y
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 334 FSNDEKLLVYKFAGNGNLFNRIHGGKS-SKNRIPFRCRSRLLVARGVARALEYLHHKDKS 392
+ N+ +L+ AG + + ++++I C+ L AL YLH
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL-------DALNYLH----- 152
Query: 393 RTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI----SYKSPEY---Q 445
+ +IH +LK+ NIL + + ++D+G S+ + I + + +PE +
Sbjct: 153 --DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCE 210
Query: 446 SSKK--ISRKSDVWSFGCLLLEL 466
+SK K+DVWS G L+E+
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEM 233
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 104/263 (39%), Gaps = 52/263 (19%)
Query: 295 VVVKRLR-DLK--PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKL-------LVYK 344
V VK LR DL P FR++ A HP ++ A Y + + + +V +
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV---AVYDTGEAETPAGPLPYIVME 96
Query: 345 FAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLK 404
+ L + +H P + + V +AL + H Q+ +IH ++K
Sbjct: 97 YVDGVTLRDIVH------TEGPMTPKRAIEVIADACQALNFSH-------QNGIIHRDVK 143
Query: 405 STNILLDDNEMVLVSDYGFSSLVA-------QPIAAQRMISYKSPEYQSSKKISRKSDVW 457
NIL+ V V D+G + +A Q A Y SPE + +SDV+
Sbjct: 144 PANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVY 203
Query: 458 SFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQRSAAHGML 517
S GC+L E+LTG G S + VRE+ + SA H L
Sbjct: 204 SLGCVLYEVLTGEPP-------FTGDSPVSVAYQHVRED----------PIPPSARHEGL 246
Query: 518 K--LLQVAIQCCNKSPEKRPEMA 538
L V ++ K+PE R + A
Sbjct: 247 SADLDAVVLKALAKNPENRYQTA 269
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 88/200 (44%), Gaps = 20/200 (10%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEF--RKQLLVIADQKHPNLLPLLAYY 333
+GKG FG YK + VV ++ DL+ E ++++ V++ P + Y
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 334 FSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSR 393
+ + ++ ++ G G+ + + G + I + R + + L+YLH + K
Sbjct: 87 LKSTKLWIIMEYLGGGSALDLLKPGPLEETYIA-------TILREILKGLDYLHSERK-- 137
Query: 394 TQSAVIHGNLKSTNILLDDNEMVLVSDYGFSS-LVAQPIAAQRMIS---YKSPEYQSSKK 449
IH ++K+ N+LL + V ++D+G + L I + + +PE
Sbjct: 138 -----IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSA 192
Query: 450 ISRKSDVWSFGCLLLELLTG 469
K+D+WS G +EL G
Sbjct: 193 YDFKADIWSLGITAIELAKG 212
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 20/160 (12%)
Query: 323 HPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARA 382
HPN++ L + LV + G LF RI K + F + R + A
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERI------KKKKHFSETEASYIMRKLVSA 118
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILL---DDNEMVLVSDYGFSSLVA---QPIAAQRM 436
+ ++H V+H +LK N+L +DN + + D+GF+ L QP+
Sbjct: 119 VSHMH-------DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF 171
Query: 437 -ISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHS 475
+ Y +PE + D+WS G +L +L+G++ S
Sbjct: 172 TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQS 211
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 104/263 (39%), Gaps = 52/263 (19%)
Query: 295 VVVKRLR-DLK--PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKL-------LVYK 344
V VK LR DL P FR++ A HP ++ A Y + + + +V +
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV---AVYATGEAETPAGPLPYIVME 96
Query: 345 FAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLK 404
+ L + +H P + + V +AL + H Q+ +IH ++K
Sbjct: 97 YVDGVTLRDIVH------TEGPMTPKRAIEVIADACQALNFSH-------QNGIIHRDVK 143
Query: 405 STNILLDDNEMVLVSDYGFSSLVA-------QPIAAQRMISYKSPEYQSSKKISRKSDVW 457
NI++ V V D+G + +A Q A Y SPE + +SDV+
Sbjct: 144 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVY 203
Query: 458 SFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQRSAAHGML 517
S GC+L E+LTG G S + VRE+ + SA H L
Sbjct: 204 SLGCVLYEVLTGE-------PPFTGDSPVSVAYQHVRED----------PIPPSARHEGL 246
Query: 518 K--LLQVAIQCCNKSPEKRPEMA 538
L V ++ K+PE R + A
Sbjct: 247 SADLDAVVLKALAKNPENRYQTA 269
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 106/235 (45%), Gaps = 34/235 (14%)
Query: 253 VFIEDEQPAGFKLNDLLKAPAEGLGKGIFGNSYKALL----EGRAPVVVKRLRDLKPLIT 308
VF E+E F ++L+A +GKG FG K + + + +K + K +
Sbjct: 5 VFDENED-VNFDHFEILRA----IGKGSFG---KVCIVQKNDTKKMYAMKYMNKQKCVER 56
Query: 309 EEFR---KQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRI 365
E R K+L ++ +HP L+ L + ++ +V G+L R H + +
Sbjct: 57 NEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDL--RYH----LQQNV 110
Query: 366 PFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSS 425
F+ + L + AL+YL ++ +IH ++K NILLD++ V ++D+ ++
Sbjct: 111 HFKEETVKLFICELVMALDYLQNQ-------RIIHRDMKPDNILLDEHGHVHITDFNIAA 163
Query: 426 LVAQPIAAQRMIS---YKSPEYQSSKK---ISRKSDVWSFGCLLLELLTGRISTH 474
++ + M Y +PE SS+K S D WS G ELL GR H
Sbjct: 164 MLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYH 218
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 28/206 (13%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLL-----VIADQKHPNLLPLL 330
+GKG FG A + ++ K ++ ++ K ++ ++ + KHP L+ L
Sbjct: 46 IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH 105
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
+ + D+ V + G LF + + R R+R A +A AL YLH +
Sbjct: 106 FSFQTADKLYFVLDYINGGELFYHL-----QRERCFLEPRARFYAAE-IASALGYLHSLN 159
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-------YKSPE 443
+++ +LK NILLD ++++D+G L + I S Y +PE
Sbjct: 160 -------IVYRDLKPENILLDSQGHIVLTDFG---LCKENIEHNSTTSTFCGTPEYLAPE 209
Query: 444 YQSSKKISRKSDVWSFGCLLLELLTG 469
+ R D W G +L E+L G
Sbjct: 210 VLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 20/153 (13%)
Query: 323 HPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARA 382
HPN++ L ++ LV + G LF+ I +R+ F ++ + V
Sbjct: 95 HPNIMKLYDFFEDKRNYYLVMECYKGGELFDEI------IHRMKFNEVDAAVIIKQVLSG 148
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDDNE---MVLVSDYGFSSLVA-QPIAAQRMIS 438
+ YLH + ++H +LK N+LL+ E ++ + D+G S++ Q +R+ +
Sbjct: 149 VTYLHKHN-------IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGT 201
Query: 439 --YKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
Y +PE KK K DVWS G +L LL G
Sbjct: 202 AYYIAPEV-LRKKYDEKCDVWSIGVILFILLAG 233
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 104/263 (39%), Gaps = 52/263 (19%)
Query: 295 VVVKRLR-DLK--PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKL-------LVYK 344
V VK LR DL P FR++ A HP ++ A Y + + + +V +
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV---AVYDTGEAETPAGPLPYIVME 96
Query: 345 FAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLK 404
+ L + +H P + + V +AL + H Q+ +IH ++K
Sbjct: 97 YVDGVTLRDIVH------TEGPMTPKRAIEVIADACQALNFSH-------QNGIIHRDVK 143
Query: 405 STNILLDDNEMVLVSDYGFSSLVA-------QPIAAQRMISYKSPEYQSSKKISRKSDVW 457
NI++ V V D+G + +A Q A Y SPE + +SDV+
Sbjct: 144 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVY 203
Query: 458 SFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQRSAAHGML 517
S GC+L E+LTG G S + VRE+ + SA H L
Sbjct: 204 SLGCVLYEVLTGEPP-------FTGDSPVSVAYQHVRED----------PIPPSARHEGL 246
Query: 518 K--LLQVAIQCCNKSPEKRPEMA 538
L V ++ K+PE R + A
Sbjct: 247 SADLDAVVLKALAKNPENRYQTA 269
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 117/245 (47%), Gaps = 38/245 (15%)
Query: 264 KLNDLLKAPAEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPL-ITEEFRKQLLVIADQK 322
++ DL + +G+G +G+ YKA + L+ ++ I+ +++ ++ + K
Sbjct: 17 RVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELK 76
Query: 323 HPNLLPLLAYYFSNDEK--LLVYKFAGNGNLFNRIHGGKSSK-NRIPFRCRSRLLVARGV 379
HPN++ L + S+ ++ L++ +A + +L++ I ++SK N+ P + + RG+
Sbjct: 77 HPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQ------LPRGM 129
Query: 380 ARAL--------EYLHHKDKSRTQSAVIHGNLKSTNILL----DDNEMVLVSDYGFSSLV 427
++L YLH + V+H +LK NIL+ + V ++D GF+ L
Sbjct: 130 VKSLLYQILDGIHYLH-------ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 182
Query: 428 AQPIAAQRMIS-------YKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQG 479
P+ + Y++PE ++ ++ D+W+ GC+ ELLT H +
Sbjct: 183 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQED 242
Query: 480 INGAD 484
I ++
Sbjct: 243 IKTSN 247
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 104/263 (39%), Gaps = 52/263 (19%)
Query: 295 VVVKRLR-DLK--PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKL-------LVYK 344
V VK LR DL P FR++ A HP ++ A Y + + + +V +
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV---AVYDTGEAETPAGPLPYIVME 96
Query: 345 FAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLK 404
+ L + +H P + + V +AL + H Q+ +IH ++K
Sbjct: 97 YVDGVTLRDIVH------TEGPMTPKRAIEVIADACQALNFSH-------QNGIIHRDVK 143
Query: 405 STNILLDDNEMVLVSDYGFSSLVA-------QPIAAQRMISYKSPEYQSSKKISRKSDVW 457
NI++ V V D+G + +A Q A Y SPE + +SDV+
Sbjct: 144 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVY 203
Query: 458 SFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQRSAAHGML 517
S GC+L E+LTG G S + VRE+ + SA H L
Sbjct: 204 SLGCVLYEVLTGEPP-------FTGDSPVSVAYQHVRED----------PIPPSARHEGL 246
Query: 518 K--LLQVAIQCCNKSPEKRPEMA 538
L V ++ K+PE R + A
Sbjct: 247 SADLDAVVLKALAKNPENRYQTA 269
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 98/203 (48%), Gaps = 24/203 (11%)
Query: 276 LGKGIFGNSYKALLEGRAPVV-VKRLR-----DLKPLITEEFRKQLLVIADQKHPNLLPL 329
LG+G F YKA + +V +K+++ + K I +++ ++ + HPN++ L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
L + LV+ F + +S P ++ +L+ + LEYLH
Sbjct: 78 LDAFGHKSNISLVFDFMETDL---EVIIKDNSLVLTPSHIKAYMLM---TLQGLEYLH-- 129
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAA--QRMIS--YKSPEYQ 445
Q ++H +LK N+LLD+N ++ ++D+G + P A ++++ Y++PE
Sbjct: 130 -----QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELL 184
Query: 446 -SSKKISRKSDVWSFGCLLLELL 467
++ D+W+ GC+L ELL
Sbjct: 185 FGARMYGVGVDMWAVGCILAELL 207
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 128/310 (41%), Gaps = 58/310 (18%)
Query: 276 LGKGIFGNSYKAL---LEGRAP-----VVVKRLR------DLKPLITEEFRKQLLVIADQ 321
LG+G FG A L+ P V VK L+ DL LI+E +++
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI----G 132
Query: 322 KHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPF--------RCRSRL 373
KH N++ LL + ++ ++A GNL + + + + S+
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 374 LV--ARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV---- 427
LV A VAR +EYL K IH +L + N+L+ ++ ++ ++D+G + +
Sbjct: 193 LVSCAYQVARGMEYLASK-------KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 245
Query: 428 --AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADL 485
+ + + + +PE + + +SDVWSFG LL E+ T S + G+ +L
Sbjct: 246 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP---GVPVEEL 302
Query: 486 CSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
+ R + + + + R C + P +RP ++V +L+
Sbjct: 303 FKLLKEGHRMDKPSNCTNELYMMMRD--------------CWHAVPSQRPTFKQLVEDLD 348
Query: 546 IIKVTESTEE 555
I S +E
Sbjct: 349 RIVALTSNQE 358
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 25/217 (11%)
Query: 263 FKLNDLLKAPAEGLGKGIFGNSYKALLEGRAP---VVVKRLRD-LKPLITEEFRKQLLVI 318
K ++LL A E LG G FG+ + + R V +K L+ + TEE ++ ++
Sbjct: 332 LKRDNLLIADIE-LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIM 390
Query: 319 ADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARG 378
+P ++ L+ + +LV + AG G L + G + IP + LL
Sbjct: 391 HQLDNPYIVRLIGV-CQAEALMLVMEMAGGGPLHKFLVG---KREEIPVSNVAELL--HQ 444
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS-------SLVAQPI 431
V+ ++YL K+ +H NL + N+LL + +SD+G S S
Sbjct: 445 VSMGMKYLEEKN-------FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARS 497
Query: 432 AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
A + + + +PE + +K S +SDVWS+G + E L+
Sbjct: 498 AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 84/177 (47%), Gaps = 24/177 (13%)
Query: 322 KHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVAR 381
+HP+++ L + + ++V ++AG G LF+ I K R+ R + +
Sbjct: 67 RHPHIIKLYDVITTPTDIVMVIEYAG-GELFDYI----VEKKRMTEDEGRRFF--QQIIC 119
Query: 382 ALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYKS 441
A+EY H + ++H +LK N+LLDDN V ++D+G S+++ + S S
Sbjct: 120 AIEYCH-------RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLK--TSCGS 170
Query: 442 PEYQSSKKISRK------SDVWSFGCLLLELLTGRI--STHSAPQGINGADLCSWVL 490
P Y + + I+ K DVWS G +L +L GR+ P + C +V+
Sbjct: 171 PNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVM 227
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 101/210 (48%), Gaps = 34/210 (16%)
Query: 276 LGKGIFGNSYKALLEGR--APVVVKRLRDLKPLITEEFRK----QLLVIADQKHPNLLPL 329
+G G +G A+ +GR A V +K+L +P +E F K +L ++ +H N++ L
Sbjct: 33 VGSGAYGAVCSAV-DGRTGAKVAIKKL--YRPFQSELFAKRAYRELRLLKHMRHENVIGL 89
Query: 330 LAYYFSNDEKL-------LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARA 382
L F+ DE L LV F G +L + K ++RI F L +
Sbjct: 90 LDV-FTPDETLDDFTDFYLVMPFMGT-DLGKLMKHEKLGEDRIQFLVYQML-------KG 140
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKS 441
L Y+H + +IH +LK N+ ++++ + + D+G + + + Y++
Sbjct: 141 LRYIH-------AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRWYRA 193
Query: 442 PEY-QSSKKISRKSDVWSFGCLLLELLTGR 470
PE + + ++ D+WS GC++ E++TG+
Sbjct: 194 PEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 25/217 (11%)
Query: 263 FKLNDLLKAPAEGLGKGIFGNSYKALLEGRAP---VVVKRLRD-LKPLITEEFRKQLLVI 318
K ++LL A E LG G FG+ + + R V +K L+ + TEE ++ ++
Sbjct: 6 LKRDNLLIADIE-LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIM 64
Query: 319 ADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARG 378
+P ++ L+ + +LV + AG G L + G + IP + LL
Sbjct: 65 HQLDNPYIVRLIGV-CQAEALMLVMEMAGGGPLHKFLVG---KREEIPVSNVAELL--HQ 118
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS-------SLVAQPI 431
V+ ++YL K+ +H +L + N+LL + +SD+G S S
Sbjct: 119 VSMGMKYLEEKN-------FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARS 171
Query: 432 AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
A + + + +PE + +K S +SDVWS+G + E L+
Sbjct: 172 AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 102/233 (43%), Gaps = 47/233 (20%)
Query: 260 PAG-FKLNDLLKAPAEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVI 318
PAG F+L +L+ G G +G YK + ++ D+ EE ++++ ++
Sbjct: 22 PAGIFELVELV-------GNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINML 74
Query: 319 ADQKHPNLLPLLAYYFS---------NDEKLLVYKFAGNG---NLFNRIHGGKSSKNRIP 366
+K+ + + YY + +D+ LV +F G G +L G + I
Sbjct: 75 --KKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIA 132
Query: 367 FRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSL 426
+ CR + R L +LH Q VIH ++K N+LL +N V + D+G S+
Sbjct: 133 YICRE-------ILRGLSHLH-------QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 178
Query: 427 VAQPIAAQRMISYKSPEYQSSKKIS----------RKSDVWSFGCLLLELLTG 469
+ + + +R +P + + + I+ KSD+WS G +E+ G
Sbjct: 179 LDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 17/146 (11%)
Query: 330 LAY-YFSNDEKLLVYKFAGNGNL-FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
LAY Y + D LV G+L F+ H G++ F + A + LE LH
Sbjct: 249 LAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG-----FPEARAVFYAAEICCGLEDLH 303
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV--AQPIAAQ-RMISYKSPEY 444
+ +++ +LK NILLDD+ + +SD G + V Q I + + Y +PE
Sbjct: 304 -------RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEV 356
Query: 445 QSSKKISRKSDVWSFGCLLLELLTGR 470
+++ + D W+ GCLL E++ G+
Sbjct: 357 VKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 276 LGKGIFGN----SYKALLEGRAPVV-VKRLRD-LKPLITEEFRKQLLVIADQKHPNLLPL 329
LG+G FG Y +G +V VK L++ P + +++++ ++ H +++
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 330 LAYYFSNDEK--LLVYKFAGNGNLFNRIHGGKSSKNRIPFRC---RSRLLVARGVARALE 384
EK LV ++ G+L ++ +P C LL A+ + +
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSL----------RDYLPRHCVGLAQLLLFAQQICEGMA 126
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-------I 437
YLH + IH L + N+LLD++ +V + D+G + V + R+ +
Sbjct: 127 YLHAQH-------YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV 179
Query: 438 SYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
+ +PE K SDVWSFG L ELLT
Sbjct: 180 FWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 276 LGKGIFGN----SYKALLEGRAPVV-VKRLRD-LKPLITEEFRKQLLVIADQKHPNLLPL 329
LG+G FG Y +G +V VK L++ P + +++++ ++ H +++
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 330 LAYYFSNDEK--LLVYKFAGNGNLFNRIHGGKSSKNRIPFRC---RSRLLVARGVARALE 384
EK LV ++ G+L ++ +P C LL A+ + +
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSL----------RDYLPRHCVGLAQLLLFAQQICEGMA 125
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-------I 437
YLH + IH L + N+LLD++ +V + D+G + V + R+ +
Sbjct: 126 YLHAQH-------YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV 178
Query: 438 SYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
+ +PE K SDVWSFG L ELLT
Sbjct: 179 FWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 104/263 (39%), Gaps = 52/263 (19%)
Query: 295 VVVKRLR-DLK--PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKL-------LVYK 344
V VK LR DL P FR++ A HP ++ A Y + + + +V +
Sbjct: 57 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV---AVYDTGEAETPAGPLPYIVME 113
Query: 345 FAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLK 404
+ L + +H P + + V +AL + H Q+ +IH ++K
Sbjct: 114 YVDGVTLRDIVH------TEGPMTPKRAIEVIADACQALNFSH-------QNGIIHRDVK 160
Query: 405 STNILLDDNEMVLVSDYGFSSLVA-------QPIAAQRMISYKSPEYQSSKKISRKSDVW 457
NI++ V V D+G + +A Q A Y SPE + +SDV+
Sbjct: 161 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVY 220
Query: 458 SFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQRSAAHGML 517
S GC+L E+LTG G S + VRE+ + SA H L
Sbjct: 221 SLGCVLYEVLTGEPP-------FTGDSPVSVAYQHVRED----------PIPPSARHEGL 263
Query: 518 K--LLQVAIQCCNKSPEKRPEMA 538
L V ++ K+PE R + A
Sbjct: 264 SADLDAVVLKALAKNPENRYQTA 286
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 17/146 (11%)
Query: 330 LAY-YFSNDEKLLVYKFAGNGNL-FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
LAY Y + D LV G+L F+ H G++ F + A + LE LH
Sbjct: 249 LAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG-----FPEARAVFYAAEICCGLEDLH 303
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV--AQPIAAQ-RMISYKSPEY 444
+ +++ +LK NILLDD+ + +SD G + V Q I + + Y +PE
Sbjct: 304 -------RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEV 356
Query: 445 QSSKKISRKSDVWSFGCLLLELLTGR 470
+++ + D W+ GCLL E++ G+
Sbjct: 357 VKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 97/216 (44%), Gaps = 35/216 (16%)
Query: 276 LGKGIFGNSYKALLEGRAPVV-VKRLRDL-KPLITEEFRKQLLVIADQKHPNLLPLLAYY 333
LG+G +G A + +V +K++ KPL +++ ++ KH N++ +
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQ 78
Query: 334 ----FSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
F N ++ + + +L I S + I + L RA++ LH
Sbjct: 79 RPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL-------RAVKVLH-- 129
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV-------AQPIAAQRMIS---- 438
S VIH +LK +N+L++ N + V D+G + ++ ++P Q ++
Sbjct: 130 -----GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVA 184
Query: 439 ---YKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
Y++PE +S K SR DVWS GC+L EL R
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 86/204 (42%), Gaps = 21/204 (10%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEE--FRKQLLVIADQKHPNLLPLLA 331
E LG G F A + + + K L +E ++ V+ KH N++ L
Sbjct: 28 ETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALED 87
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
Y S + LV + G LF+RI K + S L+ R V A+ YLH
Sbjct: 88 IYESPNHLYLVMQLVSGGELFDRI----VEKGFYTEKDASTLI--RQVLDAVYYLH---- 137
Query: 392 SRTQSAVIHGNLKSTNILL---DDNEMVLVSDYGFSSLVAQP---IAAQRMISYKSPEYQ 445
+ ++H +LK N+L D+ +++SD+G S + + A Y +PE
Sbjct: 138 ---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVL 194
Query: 446 SSKKISRKSDVWSFGCLLLELLTG 469
+ K S+ D WS G + LL G
Sbjct: 195 AQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 274 EGLGKGIFGNSYKALLE--------GRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPN 325
E LG+G F +K + V++K L +E F + +++ H +
Sbjct: 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 326 LLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
L+ DE +LV +F G+L + K+ N + +L VA+ +A A+ +
Sbjct: 74 LVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINIL-----WKLEVAKQLAAAMHF 128
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNE--------MVLVSDYGFSSLVAQPIAAQRMI 437
L ++ +IHGN+ + NILL E + +SD G S V Q I
Sbjct: 129 LE-------ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERI 181
Query: 438 SYKSPE-YQSSKKISRKSDVWSFGCLLLELLTG 469
+ PE ++ K ++ +D WSFG L E+ +G
Sbjct: 182 PWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 97/216 (44%), Gaps = 35/216 (16%)
Query: 276 LGKGIFGNSYKALLEGRAPVV-VKRLRDL-KPLITEEFRKQLLVIADQKHPNLLPLLAYY 333
LG+G +G A + +V +K++ KPL +++ ++ KH N++ +
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQ 78
Query: 334 ----FSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
F N ++ + + +L I S + I + L RA++ LH
Sbjct: 79 RPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL-------RAVKVLH-- 129
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV-------AQPIAAQRMIS---- 438
S VIH +LK +N+L++ N + V D+G + ++ ++P Q ++
Sbjct: 130 -----GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVA 184
Query: 439 ---YKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
Y++PE +S K SR DVWS GC+L EL R
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 98/206 (47%), Gaps = 26/206 (12%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFR----KQLLVIADQKHPNLLPLLA 331
LG+G FG A V ++ + K L + + +++ + +HP+++ L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
S DE ++V ++AGN LF+ I ++++ + R + + A+EY H
Sbjct: 81 VIKSKDEIIMVIEYAGN-ELFDYI----VQRDKMSEQEARRFF--QQIISAVEYCH---- 129
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYKSPEYQSSKKIS 451
+ ++H +LK N+LLD++ V ++D+G S+++ S SP Y + + IS
Sbjct: 130 ---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD--GNFLKTSCGSPNYAAPEVIS 184
Query: 452 RK------SDVWSFGCLLLELLTGRI 471
K DVWS G +L +L R+
Sbjct: 185 GKLYAGPEVDVWSCGVILYVMLCRRL 210
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 98/206 (47%), Gaps = 26/206 (12%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFR----KQLLVIADQKHPNLLPLLA 331
LG+G FG A V ++ + K L + + +++ + +HP+++ L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
S DE ++V ++AGN LF+ I ++++ + R + + A+EY H
Sbjct: 82 VIKSKDEIIMVIEYAGN-ELFDYI----VQRDKMSEQEARRFF--QQIISAVEYCH---- 130
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYKSPEYQSSKKIS 451
+ ++H +LK N+LLD++ V ++D+G S+++ S SP Y + + IS
Sbjct: 131 ---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD--GNFLKTSCGSPNYAAPEVIS 185
Query: 452 RK------SDVWSFGCLLLELLTGRI 471
K DVWS G +L +L R+
Sbjct: 186 GKLYAGPEVDVWSCGVILYVMLCRRL 211
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 22/156 (14%)
Query: 322 KHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVAR 381
+HP+++ L S DE ++V ++AGN LF+ I ++++ + R + +
Sbjct: 62 RHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYI----VQRDKMSEQEARRFF--QQIIS 114
Query: 382 ALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYKS 441
A+EY H + ++H +LK N+LLD++ V ++D+G S+++ S S
Sbjct: 115 AVEYCH-------RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD--GNFLKTSCGS 165
Query: 442 PEYQSSKKISRK------SDVWSFGCLLLELLTGRI 471
P Y + + IS K DVWS G +L +L R+
Sbjct: 166 PNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRL 201
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 104/263 (39%), Gaps = 52/263 (19%)
Query: 295 VVVKRLR-DLK--PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKL-------LVYK 344
V VK LR DL P FR++ A HP ++ A Y + + + +V +
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV---AVYDTGEAETPAGPLPYIVME 96
Query: 345 FAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLK 404
+ L + +H P + + V +AL + H Q+ +IH ++K
Sbjct: 97 YVDGVTLRDIVH------TEGPMTPKRAIEVIADACQALNFSH-------QNGIIHRDVK 143
Query: 405 STNILLDDNEMVLVSDYGFSSLVA-------QPIAAQRMISYKSPEYQSSKKISRKSDVW 457
NI++ V V D+G + +A Q A Y SPE + +SDV+
Sbjct: 144 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVY 203
Query: 458 SFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQRSAAHGML 517
S GC+L E+LTG G S + VRE+ + SA H L
Sbjct: 204 SLGCVLYEVLTGEPP-------FTGDSPDSVAYQHVRED----------PIPPSARHEGL 246
Query: 518 K--LLQVAIQCCNKSPEKRPEMA 538
L V ++ K+PE R + A
Sbjct: 247 SADLDAVVLKALAKNPENRYQTA 269
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 129/315 (40%), Gaps = 60/315 (19%)
Query: 276 LGKGIFGNSYKAL---LEGRAP-----VVVKRLR------DLKPLITE-EFRKQLLVIAD 320
LG+G FG A L+ P V VK L+ DL LI+E E K +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI----- 90
Query: 321 QKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPF--------RCRSR 372
KH N++ LL + ++ ++A GNL + + + + S+
Sbjct: 91 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 150
Query: 373 LLV--ARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV--- 427
LV A VAR +EYL K IH +L + N+L+ ++ ++ ++D+G + +
Sbjct: 151 DLVSCAYQVARGMEYLASK-------KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 203
Query: 428 ---AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGAD 484
+ + + + +PE + + +SDVWSFG LL E+ T S + G+ +
Sbjct: 204 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP---GVPVEE 260
Query: 485 LCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
L + R + + + + R H + P +RP ++V +L
Sbjct: 261 LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAV--------------PSQRPTFKQLVEDL 306
Query: 545 EIIKVTESTEEEEDF 559
+ I S +E D
Sbjct: 307 DRIVALTSNQEYLDL 321
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 129/310 (41%), Gaps = 58/310 (18%)
Query: 276 LGKGIFGNSYKAL---LEGRAP-----VVVKRLR------DLKPLITEEFRKQLLVIADQ 321
LG+G FG A L+ P V VK L+ DL LI+E +++
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI----G 83
Query: 322 KHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPF--------RCRSRL 373
KH N++ LL + ++ ++A GNL + + + + S+
Sbjct: 84 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 374 LV--ARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV---- 427
LV A VAR +EYL K IH +L + N+L+ ++ ++ ++D+G + +
Sbjct: 144 LVSCAYQVARGMEYLASK-------KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 196
Query: 428 --AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADL 485
+ + + + +PE + + +SDVWSFG LL E+ T S + G+ +L
Sbjct: 197 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP---GVPVEEL 253
Query: 486 CSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
+ R + + + +L + C + P +RP ++V +L+
Sbjct: 254 FKLLKEGHRMDKPSNCTN--------------ELYMMMRDCWHAVPSQRPTFKQLVEDLD 299
Query: 546 IIKVTESTEE 555
I S +E
Sbjct: 300 RIVALTSNQE 309
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 22/156 (14%)
Query: 322 KHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVAR 381
+HP+++ L S DE ++V ++AGN LF+ I ++++ + R + +
Sbjct: 66 RHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYI----VQRDKMSEQEARRFF--QQIIS 118
Query: 382 ALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYKS 441
A+EY H + ++H +LK N+LLD++ V ++D+G S+++ S S
Sbjct: 119 AVEYCH-------RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD--GNFLKTSCGS 169
Query: 442 PEYQSSKKISRK------SDVWSFGCLLLELLTGRI 471
P Y + + IS K DVWS G +L +L R+
Sbjct: 170 PNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRL 205
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 128/310 (41%), Gaps = 58/310 (18%)
Query: 276 LGKGIFGNSYKAL---LEGRAP-----VVVKRLR------DLKPLITEEFRKQLLVIADQ 321
LG+G FG A L+ P V VK L+ DL LI+E +++
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI----G 91
Query: 322 KHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPF--------RCRSRL 373
KH N++ LL + ++ ++A GNL + + + + S+
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 374 LV--ARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV---- 427
LV A VAR +EYL K IH +L + N+L+ ++ ++ ++D+G + +
Sbjct: 152 LVSCAYQVARGMEYLASK-------KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 428 --AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADL 485
+ + + + +PE + + +SDVWSFG LL E+ T S + G+ +L
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP---GVPVEEL 261
Query: 486 CSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
+ R + + + + R C + P +RP ++V +L+
Sbjct: 262 FKLLKEGHRMDKPSNCTNELYMMMRD--------------CWHAVPSQRPTFKQLVEDLD 307
Query: 546 IIKVTESTEE 555
I S +E
Sbjct: 308 RIVALTSNQE 317
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 87/202 (43%), Gaps = 20/202 (9%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEF--RKQLLVIADQKHPNLLPLLA 331
E +GKG FG +K + VV ++ DL+ E ++++ V++ +
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
Y + ++ ++ G G+ + + G PF + + + + L+YLH + K
Sbjct: 89 SYLKGSKLWIIMEYLGGGSALDLLRAG-------PFDEFQIATMLKEILKGLDYLHSEKK 141
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSS-LVAQPIAAQRMIS---YKSPEYQSS 447
IH ++K+ N+LL + V ++D+G + L I + + +PE
Sbjct: 142 -------IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQ 194
Query: 448 KKISRKSDVWSFGCLLLELLTG 469
K+D+WS G +EL G
Sbjct: 195 SAYDSKADIWSLGITAIELAKG 216
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 129/310 (41%), Gaps = 58/310 (18%)
Query: 276 LGKGIFGNSYKAL---LEGRAP-----VVVKRLR------DLKPLITEEFRKQLLVIADQ 321
LG+G FG A L+ P V VK L+ DL LI+E +++
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI----G 80
Query: 322 KHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPF--------RCRSRL 373
KH N++ LL + ++ ++A GNL + + + + S+
Sbjct: 81 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 374 LV--ARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV---- 427
LV A VAR +EYL K IH +L + N+L+ ++ ++ ++D+G + +
Sbjct: 141 LVSCAYQVARGMEYLASK-------KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 193
Query: 428 --AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADL 485
+ + + + +PE + + +SDVWSFG LL E+ T S + G+ +L
Sbjct: 194 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP---GVPVEEL 250
Query: 486 CSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
+ R + + + +L + C + P +RP ++V +L+
Sbjct: 251 FKLLKEGHRMDKPSNCTN--------------ELYMMMRDCWHAVPSQRPTFKQLVEDLD 296
Query: 546 IIKVTESTEE 555
I S +E
Sbjct: 297 RIVALTSNQE 306
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 128/310 (41%), Gaps = 58/310 (18%)
Query: 276 LGKGIFGNSYKAL---LEGRAP-----VVVKRLR------DLKPLITEEFRKQLLVIADQ 321
LG+G FG A L+ P V VK L+ DL LI+E +++
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI----G 84
Query: 322 KHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPF--------RCRSRL 373
KH N++ LL + ++ ++A GNL + + + + S+
Sbjct: 85 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 374 LV--ARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV---- 427
LV A VAR +EYL K IH +L + N+L+ ++ ++ ++D+G + +
Sbjct: 145 LVSCAYQVARGMEYLASK-------KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 197
Query: 428 --AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADL 485
+ + + + +PE + + +SDVWSFG LL E+ T S + G+ +L
Sbjct: 198 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP---GVPVEEL 254
Query: 486 CSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
+ R + + + + R C + P +RP ++V +L+
Sbjct: 255 FKLLKEGHRMDKPSNCTNELYMMMRD--------------CWHAVPSQRPTFKQLVEDLD 300
Query: 546 IIKVTESTEE 555
I S +E
Sbjct: 301 RIVALTSNQE 310
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 128/310 (41%), Gaps = 58/310 (18%)
Query: 276 LGKGIFGNSYKAL---LEGRAP-----VVVKRLR------DLKPLITEEFRKQLLVIADQ 321
LG+G FG A L+ P V VK L+ DL LI+E +++
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI----G 76
Query: 322 KHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPF--------RCRSRL 373
KH N++ LL + ++ ++A GNL + + + + S+
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 374 LV--ARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV---- 427
LV A VAR +EYL K IH +L + N+L+ ++ ++ ++D+G + +
Sbjct: 137 LVSCAYQVARGMEYLASK-------KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 189
Query: 428 --AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADL 485
+ + + + +PE + + +SDVWSFG LL E+ T S + G+ +L
Sbjct: 190 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP---GVPVEEL 246
Query: 486 CSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
+ R + + + + R H + P +RP ++V +L+
Sbjct: 247 FKLLKEGHRMDKPSNCTNELYMMMRDCWHAV--------------PSQRPTFKQLVEDLD 292
Query: 546 IIKVTESTEE 555
I S +E
Sbjct: 293 RIVALTSNQE 302
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 35/216 (16%)
Query: 276 LGKGIFGNSYKALLEGRAPVV-VKRLRDL-KPLITEEFRKQLLVIADQKHPNLLPLLAYY 333
LG+G +G A + +V +K++ KPL +++ ++ KH N++ +
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQ 78
Query: 334 ----FSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
F N ++ + + +L I S + I + L RA++ LH
Sbjct: 79 RPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL-------RAVKVLH-- 129
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV-------AQPIAAQR-MIS--- 438
S VIH +LK +N+L++ N + V D+G + ++ ++P Q M+
Sbjct: 130 -----GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVA 184
Query: 439 ---YKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
Y++PE +S K SR DVWS GC+L EL R
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 128/311 (41%), Gaps = 60/311 (19%)
Query: 276 LGKGIFGNSYKAL---LEGRAP-----VVVKRLR------DLKPLITE-EFRKQLLVIAD 320
LG+G FG A L+ P V VK L+ DL LI+E E K +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI----- 90
Query: 321 QKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPF--------RCRSR 372
KH N++ LL + ++ ++A GNL + + + + S+
Sbjct: 91 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSK 150
Query: 373 LLV--ARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV--- 427
LV A VAR +EYL K IH +L + N+L+ ++ ++ ++D+G + +
Sbjct: 151 DLVSCAYQVARGMEYLASK-------KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 203
Query: 428 ---AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGAD 484
+ + + + +PE + + +SDVWSFG LL E+ T S + G+ +
Sbjct: 204 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP---GVPVEE 260
Query: 485 LCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
L + R + + + + R C + P +RP ++V +L
Sbjct: 261 LFKLLKEGHRMDKPSNCTNELYMMMRD--------------CWHAVPSQRPTFKQLVEDL 306
Query: 545 EIIKVTESTEE 555
+ I S +E
Sbjct: 307 DRIVALTSNQE 317
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 27/206 (13%)
Query: 276 LGKGIFGNSY-------KALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLP 328
LGKG F Y K + G+ VV + LKP E+ ++ + +P+++
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGK---VVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVG 106
Query: 329 LLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
++ +D +V + +L +H + + R R + ++YLH+
Sbjct: 107 FHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEAR-----YFMRQTIQGVQYLHN 160
Query: 389 KDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI----SYKSPEY 444
+ VIH +LK N+ L+D+ V + D+G ++ + ++ + +Y +PE
Sbjct: 161 -------NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEV 213
Query: 445 QSSKKISRKSDVWSFGCLLLELLTGR 470
K S + D+WS GC+L LL G+
Sbjct: 214 LCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 27/206 (13%)
Query: 276 LGKGIFGNSY-------KALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLP 328
LGKG F Y K + G+ VV + LKP E+ ++ + +P+++
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGK---VVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVG 106
Query: 329 LLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
++ +D +V + +L +H + + R R + ++YLH+
Sbjct: 107 FHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEAR-----YFMRQTIQGVQYLHN 160
Query: 389 KDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI----SYKSPEY 444
+ VIH +LK N+ L+D+ V + D+G ++ + ++ + +Y +PE
Sbjct: 161 -------NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEV 213
Query: 445 QSSKKISRKSDVWSFGCLLLELLTGR 470
K S + D+WS GC+L LL G+
Sbjct: 214 LCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 27/206 (13%)
Query: 276 LGKGIFGNSY-------KALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLP 328
LGKG F + K + G+ +V + LKP E+ ++ + H +++
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGK---IVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 79
Query: 329 LLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
++ ND +V + +L +H K K R L R + +YLH
Sbjct: 80 FHGFFEDNDFVFVVLELCRRRSLLE-LH--KRRKALTEPEARYYL---RQIVLGCQYLH- 132
Query: 389 KDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI----SYKSPEY 444
++ VIH +LK N+ L+++ V + D+G ++ V ++++ +Y +PE
Sbjct: 133 ------RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEV 186
Query: 445 QSSKKISRKSDVWSFGCLLLELLTGR 470
S K S + DVWS GC++ LL G+
Sbjct: 187 LSKKGHSFEVDVWSIGCIMYTLLVGK 212
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 25/205 (12%)
Query: 276 LGKGIFGNSYKALL--EG---RAPVVVKRLRD-LKPLITEEFRKQLLVIADQKHPNLLPL 329
LG G FG YK L EG + PV +K LR+ P +E + V+A +P++ L
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
L ++ +L++ + G L + + + K+ I + V +A+ + YL +
Sbjct: 84 LGICLTSTVQLIM-QLMPFGXLLDYV---REHKDNIGSQYLLNWCVQ--IAKGMNYLEDR 137
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA------QPIAAQRMISYKSPE 443
++H +L + N+L+ + V ++D+G + L+ + I + + E
Sbjct: 138 -------RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 190
Query: 444 YQSSKKISRKSDVWSFGCLLLELLT 468
+ + +SDVWS+G + EL+T
Sbjct: 191 SILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 82/171 (47%), Gaps = 27/171 (15%)
Query: 309 EEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRI---HGGKSSKNRI 365
E RK++ ++ +HP L+ L + ++E +++Y+F G LF ++ H S +
Sbjct: 199 ETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAV 258
Query: 366 PFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLD---DNEMVLVSDYG 422
+ R V + L ++H ++ +H +LK NI+ NE+ L+ D+G
Sbjct: 259 EY--------MRQVCKGLCHMH-------ENNYVHLDLKPENIMFTTKRSNELKLI-DFG 302
Query: 423 FSSLVAQPIAAQRMIS----YKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
++ + P + ++ + + +PE K + +D+WS G L LL+G
Sbjct: 303 LTAHL-DPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 25/205 (12%)
Query: 276 LGKGIFGNSYKALL--EG---RAPVVVKRLRD-LKPLITEEFRKQLLVIADQKHPNLLPL 329
LG G FG YK L EG + PV +K LR+ P +E + V+A +P++ L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
L ++ +L++ + G L + + + K+ I + V +A+ + YL +
Sbjct: 85 LGICLTSTVQLIM-QLMPFGCLLDYV---REHKDNIGSQYLLNWCVQ--IAKGMNYLEDR 138
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA------QPIAAQRMISYKSPE 443
++H +L + N+L+ + V ++D+G + L+ + I + + E
Sbjct: 139 -------RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 444 YQSSKKISRKSDVWSFGCLLLELLT 468
+ + +SDVWS+G + EL+T
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 27/206 (13%)
Query: 276 LGKGIFGNSY-------KALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLP 328
LGKG F + K + G+ +V + LKP E+ ++ + H +++
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGK---IVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 105
Query: 329 LLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
++ ND +V + +L +H K K R L R + +YLH
Sbjct: 106 FHGFFEDNDFVFVVLELCRRRSLLE-LH--KRRKALTEPEARYYL---RQIVLGCQYLH- 158
Query: 389 KDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI----SYKSPEY 444
++ VIH +LK N+ L+++ V + D+G ++ V ++++ +Y +PE
Sbjct: 159 ------RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEV 212
Query: 445 QSSKKISRKSDVWSFGCLLLELLTGR 470
S K S + DVWS GC++ LL G+
Sbjct: 213 LSKKGHSFEVDVWSIGCIMYTLLVGK 238
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 276 LGKGIFGNSYKALL--EG---RAPVVVKRLRD-LKPLITEEFRKQLLVIADQKHPNLLPL 329
LG G FG YK L EG + PV +K LR+ P +E + V+A +P++ L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
L ++ +L+ + G L + + + K+ I + V +A+ + YL +
Sbjct: 83 LGICLTSTVQLIT-QLMPFGXLLDYV---REHKDNIGSQYLLNWCVQ--IAKGMNYLEDR 136
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA------QPIAAQRMISYKSPE 443
++H +L + N+L+ + V ++D+G + L+ + I + + E
Sbjct: 137 -------RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 444 YQSSKKISRKSDVWSFGCLLLELLT 468
+ + +SDVWS+G + EL+T
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 82/171 (47%), Gaps = 27/171 (15%)
Query: 309 EEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRI---HGGKSSKNRI 365
E RK++ ++ +HP L+ L + ++E +++Y+F G LF ++ H S +
Sbjct: 93 ETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAV 152
Query: 366 PFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLD---DNEMVLVSDYG 422
+ R V + L ++H ++ +H +LK NI+ NE+ L+ D+G
Sbjct: 153 EY--------MRQVCKGLCHMH-------ENNYVHLDLKPENIMFTTKRSNELKLI-DFG 196
Query: 423 FSSLVAQPIAAQRMIS----YKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
++ + P + ++ + + +PE K + +D+WS G L LL+G
Sbjct: 197 LTAHL-DPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 27/206 (13%)
Query: 276 LGKGIFGNSY-------KALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLP 328
LGKG F + K + G+ +V + LKP E+ ++ + H +++
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGK---IVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 103
Query: 329 LLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
++ ND +V + +L +H + + R R + +YLH
Sbjct: 104 FHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEAR-----YYLRQIVLGCQYLH- 156
Query: 389 KDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI----SYKSPEY 444
++ VIH +LK N+ L+++ V + D+G ++ V ++++ +Y +PE
Sbjct: 157 ------RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEV 210
Query: 445 QSSKKISRKSDVWSFGCLLLELLTGR 470
S K S + DVWS GC++ LL G+
Sbjct: 211 LSKKGHSFEVDVWSIGCIMYTLLVGK 236
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 25/205 (12%)
Query: 276 LGKGIFGNSYKALL--EG---RAPVVVKRLRD-LKPLITEEFRKQLLVIADQKHPNLLPL 329
LG G FG YK L EG + PV +K LR+ P +E + V+A +P++ L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
L ++ +L++ + G L + + + K+ I + V +A+ + YL +
Sbjct: 86 LGICLTSTVQLIM-QLMPFGCLLDYV---REHKDNIGSQYLLNWCVQ--IAKGMNYLEDR 139
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA------QPIAAQRMISYKSPE 443
++H +L + N+L+ + V ++D+G + L+ + I + + E
Sbjct: 140 -------RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 444 YQSSKKISRKSDVWSFGCLLLELLT 468
+ + +SDVWS+G + EL+T
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 25/205 (12%)
Query: 276 LGKGIFGNSYKALL--EG---RAPVVVKRLRD-LKPLITEEFRKQLLVIADQKHPNLLPL 329
LG G FG YK L EG + PV +K LR+ P +E + V+A +P++ L
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
L ++ +L++ + G L + + + K+ I + V +A+ + YL +
Sbjct: 87 LGICLTSTVQLIM-QLMPFGCLLDYV---REHKDNIGSQYLLNWCVQ--IAKGMNYLEDR 140
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA------QPIAAQRMISYKSPE 443
++H +L + N+L+ + V ++D+G + L+ + I + + E
Sbjct: 141 -------RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 193
Query: 444 YQSSKKISRKSDVWSFGCLLLELLT 468
+ + +SDVWS+G + EL+T
Sbjct: 194 SILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 25/205 (12%)
Query: 276 LGKGIFGNSYKALL--EG---RAPVVVKRLRD-LKPLITEEFRKQLLVIADQKHPNLLPL 329
LG G FG YK L EG + PV +K LR+ P +E + V+A +P++ L
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
L ++ +L++ + G L + + + K+ I + V +A+ + YL +
Sbjct: 84 LGICLTSTVQLIM-QLMPFGCLLDYV---REHKDNIGSQYLLNWCVQ--IAKGMNYLEDR 137
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA------QPIAAQRMISYKSPE 443
++H +L + N+L+ + V ++D+G + L+ + I + + E
Sbjct: 138 -------RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 190
Query: 444 YQSSKKISRKSDVWSFGCLLLELLT 468
+ + +SDVWS+G + EL+T
Sbjct: 191 SILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 25/205 (12%)
Query: 276 LGKGIFGNSYKALL--EG---RAPVVVKRLRD-LKPLITEEFRKQLLVIADQKHPNLLPL 329
LG G FG YK L EG + PV +K LR+ P +E + V+A +P++ L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
L ++ +L++ + G L + + + K+ I + V +A+ + YL +
Sbjct: 83 LGICLTSTVQLIM-QLMPFGCLLDYV---REHKDNIGSQYLLNWCVQ--IAKGMNYLEDR 136
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA------QPIAAQRMISYKSPE 443
++H +L + N+L+ + V ++D+G + L+ + I + + E
Sbjct: 137 -------RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 444 YQSSKKISRKSDVWSFGCLLLELLT 468
+ + +SDVWS+G + EL+T
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 105/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 147
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + A + Y++PE
Sbjct: 148 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEI 200
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 246
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 276 LGKGIFGNSYKALL--EG---RAPVVVKRLRD-LKPLITEEFRKQLLVIADQKHPNLLPL 329
LG G FG YK L EG + PV +K LR+ P +E + V+A +P++ L
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 88
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
L ++ +L+ + G L + + + K+ I + V +A+ + YL +
Sbjct: 89 LGICLTSTVQLIT-QLMPFGCLLDYV---REHKDNIGSQYLLNWCVQ--IAKGMNYLEDR 142
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA------QPIAAQRMISYKSPE 443
++H +L + N+L+ + V ++D+G + L+ + I + + E
Sbjct: 143 -------RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 195
Query: 444 YQSSKKISRKSDVWSFGCLLLELLT 468
+ + +SDVWS+G + EL+T
Sbjct: 196 SILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 27/206 (13%)
Query: 276 LGKGIFGNSY-------KALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLP 328
LGKG F Y K + G+ VV + LKP E+ ++ + +P+++
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGK---VVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVG 90
Query: 329 LLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
++ +D +V + +L +H + + R R + ++YLH+
Sbjct: 91 FHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEAR-----YFMRQTIQGVQYLHN 144
Query: 389 KDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI----SYKSPEY 444
+ VIH +LK N+ L+D+ V + D+G ++ + ++ + +Y +PE
Sbjct: 145 -------NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEV 197
Query: 445 QSSKKISRKSDVWSFGCLLLELLTGR 470
K S + D+WS GC+L LL G+
Sbjct: 198 LCKKGHSFEVDIWSLGCILYTLLVGK 223
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 276 LGKGIFGNSYKALL--EG---RAPVVVKRLRD-LKPLITEEFRKQLLVIADQKHPNLLPL 329
LG G FG YK L EG + PV +K LR+ P +E + V+A +P++ L
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 107
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
L ++ +L+ + G L + + + K+ I + V +A+ + YL +
Sbjct: 108 LGICLTSTVQLIT-QLMPFGCLLDYV---REHKDNIGSQYLLNWCVQ--IAKGMNYLEDR 161
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA------QPIAAQRMISYKSPE 443
++H +L + N+L+ + V ++D+G + L+ + I + + E
Sbjct: 162 -------RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 214
Query: 444 YQSSKKISRKSDVWSFGCLLLELLT 468
+ + +SDVWS+G + EL+T
Sbjct: 215 SILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 276 LGKGIFGNSYKALL--EG---RAPVVVKRLRD-LKPLITEEFRKQLLVIADQKHPNLLPL 329
LG G FG YK L EG + PV +K LR+ P +E + V+A +P++ L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
L ++ +L+ + G L + + + K+ I + V +A+ + YL +
Sbjct: 85 LGICLTSTVQLIT-QLMPFGCLLDYV---REHKDNIGSQYLLNWCVQ--IAKGMNYLEDR 138
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA------QPIAAQRMISYKSPE 443
++H +L + N+L+ + V ++D+G + L+ + I + + E
Sbjct: 139 -------RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 444 YQSSKKISRKSDVWSFGCLLLELLT 468
+ + +SDVWS+G + EL+T
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 21/174 (12%)
Query: 304 KPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKL-LVYKFAGNGNLFNRIHGGKSSK 362
K TE R + V+ + L L Y F + KL L+ + G LF + S +
Sbjct: 98 KAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL----SQR 153
Query: 363 NRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYG 422
R F + + ALE+LH + +I+ ++K NILLD N V+++D+G
Sbjct: 154 ER--FTEHEVQIYVGEIVLALEHLH-------KLGIIYRDIKLENILLDSNGHVVLTDFG 204
Query: 423 FS-SLVAQPIAAQR----MISYKSPEY--QSSKKISRKSDVWSFGCLLLELLTG 469
S VA I Y +P+ + D WS G L+ ELLTG
Sbjct: 205 LSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 276 LGKGIFGNSYKALL--EG---RAPVVVKRLRD-LKPLITEEFRKQLLVIADQKHPNLLPL 329
LG G FG YK L EG + PV +K LR+ P +E + V+A +P++ L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
L ++ +L+ + G L + + + K+ I + V +A+ + YL +
Sbjct: 86 LGICLTSTVQLIT-QLMPFGCLLDYV---REHKDNIGSQYLLNWCVQ--IAKGMNYLEDR 139
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA------QPIAAQRMISYKSPE 443
++H +L + N+L+ + V ++D+G + L+ + I + + E
Sbjct: 140 -------RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 444 YQSSKKISRKSDVWSFGCLLLELLT 468
+ + +SDVWS+G + EL+T
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 105/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 147
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + A + Y++PE
Sbjct: 148 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEI 200
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 246
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 27/206 (13%)
Query: 276 LGKGIFGNSY-------KALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLP 328
LGKG F + K + G+ +V + LKP E+ ++ + H +++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGK---IVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 81
Query: 329 LLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
++ ND +V + +L +H K K R L R + +YLH
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLE-LH--KRRKALTEPEARYYL---RQIVLGCQYLH- 134
Query: 389 KDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI----SYKSPEY 444
++ VIH +LK N+ L+++ V + D+G ++ V ++ + +Y +PE
Sbjct: 135 ------RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEV 188
Query: 445 QSSKKISRKSDVWSFGCLLLELLTGR 470
S K S + DVWS GC++ LL G+
Sbjct: 189 LSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 33/210 (15%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFR-KQLLVIADQKHPNLLPLLAYYF 334
+G G FG ++A L V +K++ L + F+ ++L ++ KHPN++ L A+++
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKV-----LQDKRFKNRELQIMRIVKHPNVVDLKAFFY 102
Query: 335 SNDEKL------LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
SN +K LV ++ H K K +P L + R+L Y+H
Sbjct: 103 SNGDKKDEVFLNLVLEYVPETVYRASRHYAK-LKQTMPMLLIK--LYMYQLLRSLAYIH- 158
Query: 389 KDKSRTQSAVIHGNLKSTNILLDDNEMVL-VSDYGFSSLVAQPIAAQRMIS------YKS 441
+ H ++K N+LLD VL + D+G + ++ IA + +S Y++
Sbjct: 159 ------SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL---IAGEPNVSXICSRYYRA 209
Query: 442 PEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
PE + + D+WS GC++ EL+ G+
Sbjct: 210 PELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 105/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 147
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + A + Y++PE
Sbjct: 148 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEI 200
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 246
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 276 LGKGIFGNSYKALL--EG---RAPVVVKRLRD-LKPLITEEFRKQLLVIADQKHPNLLPL 329
LG G FG YK L EG + PV +K LR+ P +E + V+A +P++ L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
L ++ +L+ + G L + + + K+ I + V +A+ + YL +
Sbjct: 83 LGICLTSTVQLIT-QLMPFGCLLDYV---REHKDNIGSQYLLNWCVQ--IAKGMNYLEDR 136
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA------QPIAAQRMISYKSPE 443
++H +L + N+L+ + V ++D+G + L+ + I + + E
Sbjct: 137 -------RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 444 YQSSKKISRKSDVWSFGCLLLELLT 468
+ + +SDVWS+G + EL+T
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 98/240 (40%), Gaps = 36/240 (15%)
Query: 276 LGKGIFGNSYKALLEGRAPV-VVKRLR--------DLKPLITEEFRKQLLVIADQKHPNL 326
LGKG FG A ++ + VK L+ D++ +TE K++L +A + HP L
Sbjct: 31 LGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTE---KRILSLA-RNHPFL 86
Query: 327 LPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYL 386
L + + D V +F G+L I K+R R+R A + AL +L
Sbjct: 87 TQLFCCFQTPDRLFFVMEFVNGGDLMFHIQ-----KSRRFDEARARFYAAE-IISALMFL 140
Query: 387 HHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSL-VAQPIAAQRMIS---YKSP 442
H K +I+ +LK N+LLD ++D+G + + Y +P
Sbjct: 141 HDK-------GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAP 193
Query: 443 EYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVL--RAVREEWTAE 500
E D W+ G LL E+L G H+ + N DL +L V W E
Sbjct: 194 EILQEMLYGPAVDWWAMGVLLYEMLCG----HAPFEAENEDDLFEAILNDEVVYPTWLHE 249
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 276 LGKGIFGNSYKALL--EG---RAPVVVKRLRD-LKPLITEEFRKQLLVIADQKHPNLLPL 329
LG G FG YK L EG + PV +K LR+ P +E + V+A +P++ L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
L ++ +L+ + G L + + + K+ I + V +A+ + YL +
Sbjct: 86 LGICLTSTVQLIT-QLMPFGCLLDYV---REHKDNIGSQYLLNWCVQ--IAKGMNYLEDR 139
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA------QPIAAQRMISYKSPE 443
++H +L + N+L+ + V ++D+G + L+ + I + + E
Sbjct: 140 -------RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 444 YQSSKKISRKSDVWSFGCLLLELLT 468
+ + +SDVWS+G + EL+T
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 27/206 (13%)
Query: 276 LGKGIFGNSY-------KALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLP 328
LGKG F Y K + G+ VV + LKP E+ ++ + +P+++
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGK---VVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVG 106
Query: 329 LLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
++ +D +V + +L +H + + R R + ++YLH+
Sbjct: 107 FHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEAR-----YFMRQTIQGVQYLHN 160
Query: 389 KDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI----SYKSPEY 444
+ VIH +LK N+ L+D+ V + D+G ++ + ++ + +Y +PE
Sbjct: 161 -------NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEV 213
Query: 445 QSSKKISRKSDVWSFGCLLLELLTGR 470
K S + D+WS GC+L LL G+
Sbjct: 214 LCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 91/206 (44%), Gaps = 27/206 (13%)
Query: 276 LGKGIFGNSY-------KALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLP 328
LGKG F + K + G+ +V + LKP E+ ++ + H +++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGK---IVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 81
Query: 329 LLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
++ ND +V + +L +H + + R R + +YLH
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEAR-----YYLRQIVLGCQYLH- 134
Query: 389 KDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI----SYKSPEY 444
++ VIH +LK N+ L+++ V + D+G ++ V ++ + +Y +PE
Sbjct: 135 ------RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEV 188
Query: 445 QSSKKISRKSDVWSFGCLLLELLTGR 470
S K S + DVWS GC++ LL G+
Sbjct: 189 LSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 67/167 (40%), Gaps = 27/167 (16%)
Query: 322 KHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVAR 381
+HPN++ L Y LV + G L ++I K F R V + +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF------FSEREASFVLHTIGK 132
Query: 382 ALEYLHHKDKSRTQSAVIHGNLKSTNILLDDN----EMVLVSDYGFS-------SLVAQP 430
+EYLH + V+H +LK +NIL D E + + D+GF+ L+ P
Sbjct: 133 TVEYLHSQ-------GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTP 185
Query: 431 IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP 477
++ PE + D+WS G LL +L G + P
Sbjct: 186 CYTANFVA---PEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGP 229
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 276 LGKGIFGNSYKALL--EG---RAPVVVKRLRD-LKPLITEEFRKQLLVIADQKHPNLLPL 329
LG G FG YK L EG + PV +K LR+ P +E + V+A +P++ L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
L ++ +L+ + G L + + + K+ I + V +A+ + YL +
Sbjct: 83 LGICLTSTVQLIT-QLMPFGCLLDYV---REHKDNIGSQYLLNWCVQ--IAKGMNYLEDR 136
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA------QPIAAQRMISYKSPE 443
++H +L + N+L+ + V ++D+G + L+ + I + + E
Sbjct: 137 -------RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 444 YQSSKKISRKSDVWSFGCLLLELLT 468
+ + +SDVWS+G + EL+T
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 276 LGKGIFGNSYKALL--EG---RAPVVVKRLRD-LKPLITEEFRKQLLVIADQKHPNLLPL 329
LG G FG YK L EG + PV +K LR+ P +E + V+A +P++ L
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
L ++ +L+ + G L + + + K+ I + V +A+ + YL +
Sbjct: 77 LGICLTSTVQLIT-QLMPFGCLLDYV---REHKDNIGSQYLLNWCVQ--IAKGMNYLEDR 130
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA------QPIAAQRMISYKSPE 443
++H +L + N+L+ + V ++D+G + L+ + I + + E
Sbjct: 131 -------RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 183
Query: 444 YQSSKKISRKSDVWSFGCLLLELLT 468
+ + +SDVWS+G + EL+T
Sbjct: 184 SILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 276 LGKGIFGNSYKALL--EG---RAPVVVKRLRD-LKPLITEEFRKQLLVIADQKHPNLLPL 329
LG G FG YK L EG + PV +K LR+ P +E + V+A +P++ L
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
L ++ +L+ + G L + + + K+ I + V +A+ + YL +
Sbjct: 90 LGICLTSTVQLIT-QLMPFGCLLDYV---REHKDNIGSQYLLNWCVQ--IAKGMNYLEDR 143
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA------QPIAAQRMISYKSPE 443
++H +L + N+L+ + V ++D+G + L+ + I + + E
Sbjct: 144 -------RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 444 YQSSKKISRKSDVWSFGCLLLELLT 468
+ + +SDVWS+G + EL+T
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 276 LGKGIFGNSYKALL--EG---RAPVVVKRLRD-LKPLITEEFRKQLLVIADQKHPNLLPL 329
LG G FG YK L EG + PV +K LR+ P +E + V+A +P++ L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
L ++ +L+ + G L + + + K+ I + V +A+ + YL +
Sbjct: 86 LGICLTSTVQLIT-QLMPFGCLLDYV---REHKDNIGSQYLLNWCVQ--IAKGMNYLEDR 139
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA------QPIAAQRMISYKSPE 443
++H +L + N+L+ + V ++D+G + L+ + I + + E
Sbjct: 140 -------RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 444 YQSSKKISRKSDVWSFGCLLLELLT 468
+ + +SDVWS+G + EL+T
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 91/211 (43%), Gaps = 35/211 (16%)
Query: 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAY 332
AE LG+G FG ++ + + + +K +K++ ++ +H N+L L
Sbjct: 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHES 69
Query: 333 YFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVA--RGVARALEYLHHKD 390
+ S +E +++++F ++F RI N F R +V+ V AL++LH +
Sbjct: 70 FESMEELVMIFEFISGLDIFERI-------NTSAFELNEREIVSYVHQVCEALQFLHSHN 122
Query: 391 KSRTQSAVIHGNLKSTNILLDD--NEMVLVSDYG----------FSSLVAQPIAAQRMIS 438
+ H +++ NI+ + + + ++G F L P
Sbjct: 123 -------IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAP-------E 168
Query: 439 YKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
Y +PE +S +D+WS G L+ LL+G
Sbjct: 169 YYAPEVHQHDVVSTATDMWSLGTLVYVLLSG 199
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 86/210 (40%), Gaps = 24/210 (11%)
Query: 276 LGKGIFGNSYKALLEGRAPV-VVKRLRDLKPLITEEFR-----KQLLVIADQKHPNLLPL 329
LGKG FG + A + +K L+ L+ ++ K++L +A +HP L +
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA-WEHPFLTHM 83
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
+ + + V ++ G+L I F A + L++LH K
Sbjct: 84 FCTFQTKENLFFVMEYLNGGDLMYHIQSCHK------FDLSRATFYAAEIILGLQFLHSK 137
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI----SYKSPEYQ 445
+++ +LK NILLD + + ++D+G A Y +PE
Sbjct: 138 -------GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEIL 190
Query: 446 SSKKISRKSDVWSFGCLLLELLTGRISTHS 475
+K + D WSFG LL E+L G+ H
Sbjct: 191 LGQKYNHSVDWWSFGVLLYEMLIGQSPFHG 220
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 27/206 (13%)
Query: 276 LGKGIFGNSY-------KALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLP 328
LGKG F + K + G+ +V + LKP E+ ++ + H +++
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGK---IVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 85
Query: 329 LLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
++ ND +V + +L +H K K R L R + +YLH
Sbjct: 86 FHGFFEDNDFVFVVLELCRRRSLLE-LH--KRRKALTEPEARYYL---RQIVLGCQYLH- 138
Query: 389 KDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI----SYKSPEY 444
++ VIH +LK N+ L+++ V + D+G ++ V ++ + +Y +PE
Sbjct: 139 ------RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEV 192
Query: 445 QSSKKISRKSDVWSFGCLLLELLTGR 470
S K S + DVWS GC++ LL G+
Sbjct: 193 LSKKGHSFEVDVWSIGCIMYTLLVGK 218
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 276 LGKGIFGNSYKALL--EG---RAPVVVKRLRD-LKPLITEEFRKQLLVIADQKHPNLLPL 329
LG G FG YK L EG + PV +K LR+ P +E + V+A +P++ L
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 92
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
L ++ +L+ + G L + + + K+ I + V +A+ + YL +
Sbjct: 93 LGICLTSTVQLIT-QLMPFGCLLDYV---REHKDNIGSQYLLNWCVQ--IAKGMNYLEDR 146
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA------QPIAAQRMISYKSPE 443
++H +L + N+L+ + V ++D+G + L+ + I + + E
Sbjct: 147 -------RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 199
Query: 444 YQSSKKISRKSDVWSFGCLLLELLT 468
+ + +SDVWS+G + EL+T
Sbjct: 200 SILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/282 (19%), Positives = 119/282 (42%), Gaps = 40/282 (14%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRLRDLKPL----ITEEFRKQLLVIADQKHPNLLPLL 330
+G+G FG+ ++ + + P + ++ K + E+F ++ L + HP+++ L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
+ + ++ + G L + + K S + S +L A ++ AL YL K
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFLQVRKFSLD-----LASLILYAYQLSTALAYLESK- 130
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS-----SLVAQPIAAQRMISYKSPEYQ 445
+H ++ + N+L+ N+ V + D+G S S + + I + +PE
Sbjct: 131 ------RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESI 184
Query: 446 SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSE 505
+ ++ + SDVW FG + E+L + QG+ D+ + R
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMHGVKPF---QGVKNNDVIGRIENGER----------- 230
Query: 506 ISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
+ + + + L+ +C P +RP E+ ++L I
Sbjct: 231 LPMPPNCPPTLYSLM---TKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 89/216 (41%), Gaps = 36/216 (16%)
Query: 274 EGLGKGIFGNSYKALLEGRAP-VVVKRLR-DLKPLITEEFRKQLLVIADQKHPNLLPL-- 329
E LG G FG + + + V +K+ R +L P E + ++ ++ HPN++
Sbjct: 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 79
Query: 330 ----LAYYFSNDEKLLVYKFAGNGNL------FNRIHGGKSSKNRIPFRCRSRLLVARGV 379
L ND LL ++ G+L F G K P R + +
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG----PIRT-----LLSDI 130
Query: 380 ARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVS---DYGFSSLVAQPIAAQRM 436
+ AL YLH ++ +IH +LK NI+L L+ D G++ + Q
Sbjct: 131 SSALRYLH-------ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEF 183
Query: 437 I---SYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
+ Y +PE KK + D WSFG L E +TG
Sbjct: 184 VGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/282 (19%), Positives = 119/282 (42%), Gaps = 40/282 (14%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRLRDLKPL----ITEEFRKQLLVIADQKHPNLLPLL 330
+G+G FG+ ++ + + P + ++ K + E+F ++ L + HP+++ L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
+ + ++ + G L + + K S + S +L A ++ AL YL K
Sbjct: 106 GV-ITENPVWIIMELCTLGELRSFLQVRKYSLD-----LASLILYAYQLSTALAYLESKR 159
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS-----SLVAQPIAAQRMISYKSPEYQ 445
+H ++ + N+L+ N+ V + D+G S S + + I + +PE
Sbjct: 160 -------FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 212
Query: 446 SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSE 505
+ ++ + SDVW FG + E+L + QG+ D+ + R
Sbjct: 213 NFRRFTSASDVWMFGVCMWEILMHGVKPF---QGVKNNDVIGRIENGER----------- 258
Query: 506 ISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
+ + + + L+ +C P +RP E+ ++L I
Sbjct: 259 LPMPPNCPPTLYSLM---TKCWAYDPSRRPRFTELKAQLSTI 297
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 121/293 (41%), Gaps = 50/293 (17%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKR---LRDLKPLITEEFRKQLL-----VIADQKHPNLL 327
LG+G FG +A G R ++ LK T + L+ +I H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 328 PLLAYYFSNDEKLLV-YKFAGNGNLFNRIHGGKSSKNR-IPFR--------CRSRLLVAR 377
LL L+V +F GNL + +S +N +P++ + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYL---RSKRNEFVPYKDLYKDFLTLEHLICYSF 151
Query: 378 GVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV------AQPI 431
VA+ +E+L IH +L + NILL + +V + D+G + + +
Sbjct: 152 QVAKGMEFL-------ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 204
Query: 432 AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLR 491
A+ + + +PE + + +SDVWSFG LL E+ + S + +
Sbjct: 205 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK------------- 251
Query: 492 AVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
+ EE+ + E + R+ + ++ Q + C + P +RP +E+V L
Sbjct: 252 -IDEEFCRRL--KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 76/172 (44%), Gaps = 29/172 (16%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV------AQPIA 432
VA+ +E+L IH +L + NILL + +V + D+G + + +
Sbjct: 153 VAKGMEFL-------ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGD 205
Query: 433 AQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRA 492
A+ + + +PE + + +SDVWSFG LL E+ + S + +
Sbjct: 206 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK-------------- 251
Query: 493 VREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
+ EE+ + E + R+ + ++ Q + C + P +RP +E+V L
Sbjct: 252 IDEEFXRRL--KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 89/216 (41%), Gaps = 36/216 (16%)
Query: 274 EGLGKGIFGNSYKALLEGRAP-VVVKRLR-DLKPLITEEFRKQLLVIADQKHPNLLPL-- 329
E LG G FG + + + V +K+ R +L P E + ++ ++ HPN++
Sbjct: 21 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 80
Query: 330 ----LAYYFSNDEKLLVYKFAGNGNL------FNRIHGGKSSKNRIPFRCRSRLLVARGV 379
L ND LL ++ G+L F G K P R + +
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG----PIRT-----LLSDI 131
Query: 380 ARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVS---DYGFSSLVAQPIAAQRM 436
+ AL YLH ++ +IH +LK NI+L L+ D G++ + Q
Sbjct: 132 SSALRYLH-------ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEF 184
Query: 437 I---SYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
+ Y +PE KK + D WSFG L E +TG
Sbjct: 185 VGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 140
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + DYG + + Y++PE
Sbjct: 141 IHSAD-------IIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWYRAPEI 193
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 239
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 20/167 (11%)
Query: 309 EEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFR 368
EE ++ ++ HPN++ L + LV +F G LF +I NR F
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQII------NRHKFD 144
Query: 369 CRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVL---VSDYGFSS 425
+ + + + YLH + ++H ++K NILL++ +L + D+G SS
Sbjct: 145 ECDAANIMKQILSGICYLH-------KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSS 197
Query: 426 LVAQPIAAQRMIS---YKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
++ + + Y +PE KK + K DVWS G ++ LL G
Sbjct: 198 FFSKDYKLRDRLGTAYYIAPEVL-KKKYNEKCDVWSCGVIMYILLCG 243
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 105/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 140
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 141 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
++ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 194 MLNAMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 239
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 29/172 (16%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-- 436
VA+ +E+L IH +L + NILL + +V + D+G + + + R
Sbjct: 157 VAKGMEFL-------ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 437 ----ISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRA 492
+ + +PE + + +SDVWSFG LL E+ + S + +
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK-------------- 255
Query: 493 VREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
+ EE+ + E + R+ + ++ Q + C + P +RP +E+V L
Sbjct: 256 IDEEFCRRL--KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 107/232 (46%), Gaps = 36/232 (15%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 140
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIA---AQRMISYKSP 442
+H D +IH +LK +N+ ++++ + + D+G + +A A R Y++P
Sbjct: 141 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRW--YRAP 191
Query: 443 EYQ-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
E + ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 239
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 67/167 (40%), Gaps = 27/167 (16%)
Query: 322 KHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVAR 381
+HPN++ L Y LV + G L ++I K F R V + +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF------FSEREASFVLHTIGK 132
Query: 382 ALEYLHHKDKSRTQSAVIHGNLKSTNILLDDN----EMVLVSDYGFS-------SLVAQP 430
+EYLH + V+H +LK +NIL D E + + D+GF+ L+ P
Sbjct: 133 TVEYLHSQ-------GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTP 185
Query: 431 IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP 477
++ PE + D+WS G LL +L G + P
Sbjct: 186 CYTANFVA---PEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGP 229
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 107/232 (46%), Gaps = 36/232 (15%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 140
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIA---AQRMISYKSP 442
+H D +IH +LK +N+ ++++ + + D+G + +A A R Y++P
Sbjct: 141 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRW--YRAP 191
Query: 443 EYQ-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
E + ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 239
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 86/210 (40%), Gaps = 24/210 (11%)
Query: 276 LGKGIFGNSYKALLEGRAPV-VVKRLRDLKPLITEEFR-----KQLLVIADQKHPNLLPL 329
LGKG FG + A + +K L+ L+ ++ K++L +A +HP L +
Sbjct: 26 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA-WEHPFLTHM 84
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
+ + + V ++ G+L I F A + L++LH K
Sbjct: 85 FCTFQTKENLFFVMEYLNGGDLMYHIQSCHK------FDLSRATFYAAEIILGLQFLHSK 138
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI----SYKSPEYQ 445
+++ +LK NILLD + + ++D+G A Y +PE
Sbjct: 139 -------GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEIL 191
Query: 446 SSKKISRKSDVWSFGCLLLELLTGRISTHS 475
+K + D WSFG LL E+L G+ H
Sbjct: 192 LGQKYNHSVDWWSFGVLLYEMLIGQSPFHG 221
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 29/172 (16%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-- 436
VA+ +E+L IH +L + NILL + +V + D+G + + + R
Sbjct: 157 VAKGMEFL-------ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 437 ----ISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRA 492
+ + +PE + + +SDVWSFG LL E+ + S + +
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK-------------- 255
Query: 493 VREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
+ EE+ + E + R+ + ++ Q + C + P +RP +E+V L
Sbjct: 256 IDEEFCRRL--KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 102/231 (44%), Gaps = 30/231 (12%)
Query: 255 IEDEQPAGFKLNDLLKAPAEGLGKGIFGNSYKALLEGRAPVV-VKRLRDLKPLITEEFRK 313
I EQ F DL K E +G+G +G+ K + + ++ VKR+R + E+ +K
Sbjct: 11 ISPEQHWDFTAEDL-KDLGE-IGRGAYGSVNKMVHKPSGQIMAVKRIRST---VDEKEQK 65
Query: 314 QLL-----VIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSS--KNRIP 366
QLL V+ P ++ F + + + F++ + S + IP
Sbjct: 66 QLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTS--FDKFYKYVYSVLDDVIP 123
Query: 367 FRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSL 426
++ +A +AL +L K +IH ++K +NILLD + + + D+G S
Sbjct: 124 EEILGKITLA--TVKALNHLKENLK------IIHRDIKPSNILLDRSGNIKLCDFGISGQ 175
Query: 427 VAQPIAAQRMIS---YKSPEY----QSSKKISRKSDVWSFGCLLLELLTGR 470
+ IA R Y +PE S + +SDVWS G L EL TGR
Sbjct: 176 LVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 29/172 (16%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-- 436
VA+ +E+L IH +L + NILL + +V + D+G + + + R
Sbjct: 157 VAKGMEFL-------ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 437 ----ISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRA 492
+ + +PE + + +SDVWSFG LL E+ + S + +
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK-------------- 255
Query: 493 VREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
+ EE+ + E + R+ + ++ Q + C + P +RP +E+V L
Sbjct: 256 IDEEFCRRL--KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/282 (19%), Positives = 119/282 (42%), Gaps = 40/282 (14%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRLRDLKPL----ITEEFRKQLLVIADQKHPNLLPLL 330
+G+G FG+ ++ + + P + ++ K + E+F ++ L + HP+++ L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
+ + ++ + G L + + K S + S +L A ++ AL YL K
Sbjct: 458 GV-ITENPVWIIMELCTLGELRSFLQVRKFSLD-----LASLILYAYQLSTALAYLESK- 510
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS-----SLVAQPIAAQRMISYKSPEYQ 445
+H ++ + N+L+ N+ V + D+G S S + + I + +PE
Sbjct: 511 ------RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 564
Query: 446 SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSE 505
+ ++ + SDVW FG + E+L + QG+ D+ + R
Sbjct: 565 NFRRFTSASDVWMFGVCMWEILMHGVKPF---QGVKNNDVIGRIENGER----------- 610
Query: 506 ISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
+ + + + L+ +C P +RP E+ ++L I
Sbjct: 611 LPMPPNCPPTLYSLM---TKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/282 (19%), Positives = 119/282 (42%), Gaps = 40/282 (14%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRLRDLKPL----ITEEFRKQLLVIADQKHPNLLPLL 330
+G+G FG+ ++ + + P + ++ K + E+F ++ L + HP+++ L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
+ + ++ + G L + + K S + S +L A ++ AL YL K
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFLQVRKYSLD-----LASLILYAYQLSTALAYLESK- 130
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS-----SLVAQPIAAQRMISYKSPEYQ 445
+H ++ + N+L+ N+ V + D+G S S + + I + +PE
Sbjct: 131 ------RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 184
Query: 446 SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSE 505
+ ++ + SDVW FG + E+L + QG+ D+ + R
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMHGVKPF---QGVKNNDVIGRIENGER----------- 230
Query: 506 ISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
+ + + + L+ +C P +RP E+ ++L I
Sbjct: 231 LPMPPNCPPTLYSLM---TKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 93/205 (45%), Gaps = 25/205 (12%)
Query: 276 LGKGIFGNSYKALL--EG---RAPVVVKRLRD-LKPLITEEFRKQLLVIADQKHPNLLPL 329
LG G FG YK L EG + PV +K LR+ P +E + V+A +P++ L
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
L ++ +L+ + G L + + + K+ I + V +A + YL +
Sbjct: 80 LGICLTSTVQLIT-QLMPFGCLLDYV---REHKDNIGSQYLLNWCVQ--IAEGMNYLEDR 133
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA------QPIAAQRMISYKSPE 443
++H +L + N+L+ + V ++D+G + L+ + I + + E
Sbjct: 134 -------RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 186
Query: 444 YQSSKKISRKSDVWSFGCLLLELLT 468
+ + +SDVWS+G + EL+T
Sbjct: 187 SILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 29/172 (16%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-- 436
VA+ +E+L IH +L + NILL + +V + D+G + + + R
Sbjct: 148 VAKGMEFL-------ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 437 ----ISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRA 492
+ + +PE + + +SDVWSFG LL E+ + S + +
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK-------------- 246
Query: 493 VREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
+ EE+ + E + R+ + ++ Q + C + P +RP +E+V L
Sbjct: 247 IDEEFCRRL--KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 276 LGKGIFGNSYKALL--EG---RAPVVVKRLRDLKPLIT-EEFRKQLLVIADQKHPNLLPL 329
LG G+FG +K + EG + PV +K + D + + +L I H +++ L
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGV--ARALEYLH 387
L + +L V ++ G+L + + + + +LL+ GV A+ + YL
Sbjct: 99 LGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALG-------PQLLLNWGVQIAKGMYYLE 150
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP------IAAQRMISYKS 441
+ ++H NL + N+LL V V+D+G + L+ A+ I + +
Sbjct: 151 -------EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 203
Query: 442 PEYQSSKKISRKSDVWSFGCLLLELLT 468
E K + +SDVWS+G + EL+T
Sbjct: 204 LESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/282 (19%), Positives = 119/282 (42%), Gaps = 40/282 (14%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRLRDLKPL----ITEEFRKQLLVIADQKHPNLLPLL 330
+G+G FG+ ++ + + P + ++ K + E+F ++ L + HP+++ L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
+ + ++ + G L + + K S + S +L A ++ AL YL K
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFLQVRKYSLD-----LASLILYAYQLSTALAYLESK- 130
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS-----SLVAQPIAAQRMISYKSPEYQ 445
+H ++ + N+L+ N+ V + D+G S S + + I + +PE
Sbjct: 131 ------RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 184
Query: 446 SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSE 505
+ ++ + SDVW FG + E+L + QG+ D+ + R
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMHGVKPF---QGVKNNDVIGRIENGER----------- 230
Query: 506 ISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
+ + + + L+ +C P +RP E+ ++L I
Sbjct: 231 LPMPPNCPPTLYSLM---TKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 21/170 (12%)
Query: 307 ITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRI-HGGKSSKNRI 365
I E +++++ +HPN++ + +V ++A G LF RI + G+ S++
Sbjct: 58 IDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEA 117
Query: 366 PFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM--VLVSDYGF 423
F + +L+ A A++ V H +LK N LLD + + ++D+G+
Sbjct: 118 RFFFQ-QLISGVSYAHAMQ-------------VAHRDLKLENTLLDGSPAPRLKIADFGY 163
Query: 424 SS---LVAQPIAAQRMISYKSPEYQSSKKISRK-SDVWSFGCLLLELLTG 469
S L +QP +A +Y +PE K+ K +DVWS G L +L G
Sbjct: 164 SKASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 29/172 (16%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-- 436
VA+ +E+L IH +L + NILL + +V + D+G + + + R
Sbjct: 148 VAKGMEFL-------ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 437 ----ISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRA 492
+ + +PE + + +SDVWSFG LL E+ + S + +
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK-------------- 246
Query: 493 VREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
+ EE+ + E + R+ + ++ Q + C + P +RP +E+V L
Sbjct: 247 IDEEFCRRL--KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 145
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 146 IHSAD-------IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEI 198
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 244
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/289 (19%), Positives = 121/289 (41%), Gaps = 40/289 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRLRDLKPL----ITEEFRKQLLVIADQKHPNLLPLL 330
+G+G FG+ ++ + + P + ++ K + E+F ++ L + HP+++ L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
+ + ++ + G L + + K S + S +L A ++ AL YL K
Sbjct: 83 GV-ITENPVWIIMELCTLGELRSFLQVRKYSLD-----LASLILYAYQLSTALAYLESKR 136
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS-----SLVAQPIAAQRMISYKSPEYQ 445
+H ++ + N+L+ N+ V + D+G S S + + I + +PE
Sbjct: 137 -------FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 189
Query: 446 SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSE 505
+ ++ + SDVW FG + E+L + QG+ D+ + R
Sbjct: 190 NFRRFTSASDVWMFGVCMWEILMHGVKPF---QGVKNNDVIGRIENGER----------- 235
Query: 506 ISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTESTE 554
+ + + + L+ +C P +RP E+ ++L I E +
Sbjct: 236 LPMPPNCPPTLYSLM---TKCWAYDPSRRPRFTELKAQLSTILEEEKAQ 281
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 107/232 (46%), Gaps = 36/232 (15%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 136
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIA---AQRMISYKSP 442
+H D +IH +LK +N+ ++++ + + D+G + +A A R Y++P
Sbjct: 137 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRW--YRAP 187
Query: 443 EYQ-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
E + ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 235
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 25/205 (12%)
Query: 276 LGKGIFGNSYKALL--EG---RAPVVVKRLRD-LKPLITEEFRKQLLVIADQKHPNLLPL 329
LG G FG YK L EG + PV +K LR+ P +E + V+A +P++ L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
L ++ +L++ + G L + + + K+ I + V +A+ + YL +
Sbjct: 85 LGICLTSTVQLIM-QLMPFGCLLDYV---REHKDNIGSQYLLNWCVQ--IAKGMNYLEDR 138
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA------QPIAAQRMISYKSPE 443
++H +L + N+L+ + V ++D+G + L+ + I + + E
Sbjct: 139 -------RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 444 YQSSKKISRKSDVWSFGCLLLELLT 468
+ + +SDVWS+G + EL+T
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 76/172 (44%), Gaps = 29/172 (16%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV------AQPIA 432
VA+ +E+L IH +L + NILL + +V + D+G + + +
Sbjct: 194 VAKGMEFL-------ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 246
Query: 433 AQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRA 492
A+ + + +PE + + +SDVWSFG LL E+ + S + +
Sbjct: 247 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK-------------- 292
Query: 493 VREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
+ EE+ + E + R+ + ++ Q + C + P +RP +E+V L
Sbjct: 293 IDEEFCRRL--KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 342
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 76/172 (44%), Gaps = 29/172 (16%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV------AQPIA 432
VA+ +E+L IH +L + NILL + +V + D+G + + +
Sbjct: 200 VAKGMEFL-------ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 252
Query: 433 AQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRA 492
A+ + + +PE + + +SDVWSFG LL E+ + S + +
Sbjct: 253 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK-------------- 298
Query: 493 VREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
+ EE+ + E + R+ + ++ Q + C + P +RP +E+V L
Sbjct: 299 IDEEFCRRL--KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 94/201 (46%), Gaps = 27/201 (13%)
Query: 279 GIFGNSYKALLEGRAPVVVKRLRDLKPLIT-EEFRKQLLVIADQKHPNLLPLL-AYYFSN 336
G FG YKA + + + ++ D K E++ ++ ++A HPN++ LL A+Y+ N
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 80
Query: 337 DEKLLVYKFAGNGNLFNRIHGGKS-SKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQ 395
+ +L+ AG + + ++++I C+ L AL YLH
Sbjct: 81 NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL-------DALNYLH-------D 126
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYKSPEYQSSKKI----- 450
+ +IH +LK+ NIL + + ++D+G S+ + +R +P + + + +
Sbjct: 127 NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETS 186
Query: 451 -----SRKSDVWSFGCLLLEL 466
K+DVWS G L+E+
Sbjct: 187 KDRPYDYKADVWSLGITLIEM 207
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 25/205 (12%)
Query: 276 LGKGIFGNSYKALL--EG---RAPVVVKRLRD-LKPLITEEFRKQLLVIADQKHPNLLPL 329
LG G FG YK L EG + PV +K LR+ P +E + V+A +P++ L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
L ++ +L++ + G L + + + K+ I + V +A+ + YL +
Sbjct: 85 LGICLTSTVQLIM-QLMPFGCLLDYV---REHKDNIGSQYLLNWCVQ--IAKGMNYLEDR 138
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA------QPIAAQRMISYKSPE 443
++H +L + N+L+ + V ++D+G + L+ + I + + E
Sbjct: 139 -------RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 444 YQSSKKISRKSDVWSFGCLLLELLT 468
+ + +SDVWS+G + EL+T
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 76/172 (44%), Gaps = 29/172 (16%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV------AQPIA 432
VA+ +E+L IH +L + NILL + +V + D+G + + +
Sbjct: 207 VAKGMEFL-------ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 259
Query: 433 AQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRA 492
A+ + + +PE + + +SDVWSFG LL E+ + S + +
Sbjct: 260 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK-------------- 305
Query: 493 VREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
+ EE+ + E + R+ + ++ Q + C + P +RP +E+V L
Sbjct: 306 IDEEFCRRL--KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 355
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 76/172 (44%), Gaps = 29/172 (16%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV------AQPIA 432
VA+ +E+L IH +L + NILL + +V + D+G + + +
Sbjct: 159 VAKGMEFL-------ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 211
Query: 433 AQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRA 492
A+ + + +PE + + +SDVWSFG LL E+ + S + +
Sbjct: 212 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK-------------- 257
Query: 493 VREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
+ EE+ + E + R+ + ++ Q + C + P +RP +E+V L
Sbjct: 258 IDEEFCRRL--KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 307
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 76/172 (44%), Gaps = 29/172 (16%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV------AQPIA 432
VA+ +E+L IH +L + NILL + +V + D+G + + +
Sbjct: 157 VAKGMEFL-------ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 209
Query: 433 AQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRA 492
A+ + + +PE + + +SDVWSFG LL E+ + S + +
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK-------------- 255
Query: 493 VREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
+ EE+ + E + R+ + ++ Q + C + P +RP +E+V L
Sbjct: 256 IDEEFCRRL--KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLN--NIVKXQKLTDDHVQF-------LIYQILRGLKY 140
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 141 IHSAD-------IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 239
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 33/173 (19%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV---AQPIAAQR 435
+ + ++Y+H K +IH +LK +NI L D + V + D+G + + + ++
Sbjct: 145 ITKGVDYIHSK-------KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKG 197
Query: 436 MISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVRE 495
+ Y SPE SS+ ++ D+++ G +L ELL H S +R+
Sbjct: 198 TLRYMSPEQISSQDYGKEVDLYALGLILAELL------HVCDTAFE----TSKFFTDLRD 247
Query: 496 EWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548
++IFD + LLQ + +K PE RP +E++ L + K
Sbjct: 248 GIISDIFDKKEKT----------LLQ---KLLSKKPEDRPNTSEILRTLTVWK 287
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 76/172 (44%), Gaps = 29/172 (16%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV------AQPIA 432
VA+ +E+L IH +L + NILL + +V + D+G + + +
Sbjct: 157 VAKGMEFL-------ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGD 209
Query: 433 AQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRA 492
A+ + + +PE + + +SDVWSFG LL E+ + S + +
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK-------------- 255
Query: 493 VREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
+ EE+ + E + R+ + ++ Q + C + P +RP +E+V L
Sbjct: 256 IDEEFCRRL--KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 113/278 (40%), Gaps = 47/278 (16%)
Query: 274 EGLGKGIFGNSYKALLEGRAP------VVVKRLR-DL--KPLITEEFRKQLLVIADQKHP 324
E LG G FG + E AP V VK L+ D+ +P ++F +++ + H
Sbjct: 18 EKLGDGSFGVVRRG--EWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 75
Query: 325 NLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALE 384
NL+ L + K+ V + A G+L +R+ + + SR V VA +
Sbjct: 76 NLIRLYGVVLTPPMKM-VTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQ--VAEGMG 129
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ-----PIAAQRMISY 439
YL K IH +L + N+LL ++V + D+G + Q + R + +
Sbjct: 130 YLESK-------RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF 182
Query: 440 K--SPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEW 497
+PE ++ S SD W FG L E+ T G+NG S +L + +E
Sbjct: 183 AWCAPESLKTRTFSHASDTWMFGVTLWEMFT---YGQEPWIGLNG----SQILHKIDKE- 234
Query: 498 TAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRP 535
+ E Q + V +QC PE RP
Sbjct: 235 GERLPRPEDCPQ--------DIYNVMVQCWAHKPEDRP 264
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 103/230 (44%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLN--NIVKSQKLTDDHVQF-------LIYQILRGLKY 140
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + Y++PE
Sbjct: 141 IHSAD-------IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWYRAPEI 193
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 239
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 76/172 (44%), Gaps = 29/172 (16%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV------AQPIA 432
VA+ +E+L IH +L + NILL + +V + D+G + + +
Sbjct: 209 VAKGMEFL-------ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 261
Query: 433 AQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRA 492
A+ + + +PE + + +SDVWSFG LL E+ + S + +
Sbjct: 262 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK-------------- 307
Query: 493 VREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
+ EE+ + E + R+ + ++ Q + C + P +RP +E+V L
Sbjct: 308 IDEEFCRRL--KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 357
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 142
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 143 IHSAD-------IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEI 195
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 241
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 76/172 (44%), Gaps = 29/172 (16%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV------AQPIA 432
VA+ +E+L IH +L + NILL + +V + D+G + + +
Sbjct: 202 VAKGMEFL-------ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 254
Query: 433 AQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRA 492
A+ + + +PE + + +SDVWSFG LL E+ + S + +
Sbjct: 255 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK-------------- 300
Query: 493 VREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
+ EE+ + E + R+ + ++ Q + C + P +RP +E+V L
Sbjct: 301 IDEEFCRRL--KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 350
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 145
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 146 IHSAD-------IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEI 198
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 244
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 146
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 147 IHSAD-------IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEI 199
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 245
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 76/172 (44%), Gaps = 29/172 (16%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV------AQPIA 432
VA+ +E+L IH +L + NILL + +V + D+G + + +
Sbjct: 148 VAKGMEFL-------ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 433 AQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRA 492
A+ + + +PE + + +SDVWSFG LL E+ + S + +
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK-------------- 246
Query: 493 VREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
+ EE+ + E + R+ + ++ Q + C + P +RP +E+V L
Sbjct: 247 IDEEFCRRL--KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 76/172 (44%), Gaps = 29/172 (16%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV------AQPIA 432
VA+ +E+L IH +L + NILL + +V + D+G + + +
Sbjct: 148 VAKGMEFL-------ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 433 AQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRA 492
A+ + + +PE + + +SDVWSFG LL E+ + S + +
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK-------------- 246
Query: 493 VREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
+ EE+ + E + R+ + ++ Q + C + P +RP +E+V L
Sbjct: 247 IDEEFCRRL--KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 276 LGKGIFGNSYKALL--EG---RAPVVVKRLRDLKPLIT-EEFRKQLLVIADQKHPNLLPL 329
LG G+FG +K + EG + PV +K + D + + +L I H +++ L
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGV--ARALEYLH 387
L + +L V ++ G+L + + + + +LL+ GV A+ + YL
Sbjct: 81 LGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALG-------PQLLLNWGVQIAKGMYYLE 132
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP------IAAQRMISYKS 441
+ ++H NL + N+LL V V+D+G + L+ A+ I + +
Sbjct: 133 -------EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 185
Query: 442 PEYQSSKKISRKSDVWSFGCLLLELLT 468
E K + +SDVWS+G + EL+T
Sbjct: 186 LESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 276 LGKGIFGNSYKALL--EG---RAPVVVKRLRD-LKPLITEEFRKQLLVIADQKHPNLLPL 329
LG G FG YK L EG + PV +K LR+ P +E + V+A +P++ L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
L ++ +L+ + G L + + + K+ I + V +A+ + YL +
Sbjct: 83 LGICLTSTVQLIT-QLMPFGCLLDYV---REHKDNIGSQYLLNWCVQ--IAKGMNYLEDR 136
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA------QPIAAQRMISYKSPE 443
++H +L + N+L+ + V ++D+G + L+ + I + + E
Sbjct: 137 -------RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 444 YQSSKKISRKSDVWSFGCLLLELLT 468
+ + +SDVWS+G + EL+T
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 276 LGKGIFGNSYKALL--EG---RAPVVVKRLRD-LKPLITEEFRKQLLVIADQKHPNLLPL 329
LG G FG YK L EG + PV +K LR+ P +E + V+A +P++ L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
L ++ +L+ + G L + + + K+ I + V +A+ + YL +
Sbjct: 85 LGICLTSTVQLIT-QLMPFGCLLDYV---REHKDNIGSQYLLNWCVQ--IAKGMNYLEDR 138
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA------QPIAAQRMISYKSPE 443
++H +L + N+L+ + V ++D+G + L+ + I + + E
Sbjct: 139 -------RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 444 YQSSKKISRKSDVWSFGCLLLELLT 468
+ + +SDVWS+G + EL+T
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 25/205 (12%)
Query: 276 LGKGIFGNSYKALL--EG---RAPVVVKRLRD-LKPLITEEFRKQLLVIADQKHPNLLPL 329
LG G FG YK L EG + PV +K LR+ P +E + V+A +P++ L
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
L ++ +L++ + G L + + + K+ I + V +A+ + YL +
Sbjct: 87 LGICLTSTVQLIM-QLMPFGCLLDYV---REHKDNIGSQYLLNWCVQ--IAKGMNYLEDR 140
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA------QPIAAQRMISYKSPE 443
++H +L + N+L+ + V ++D+G + L+ + I + + E
Sbjct: 141 -------RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 193
Query: 444 YQSSKKISRKSDVWSFGCLLLELLT 468
+ + +SDVWS+G + EL+T
Sbjct: 194 SILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 276 LGKGIFGNSYKALL--EG---RAPVVVKRLRD-LKPLITEEFRKQLLVIADQKHPNLLPL 329
LG G FG YK L EG + PV +K LR+ P +E + V+A +P++ L
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
L ++ +L+ + G L + + + K+ I + V +A+ + YL +
Sbjct: 90 LGICLTSTVQLIT-QLMPFGCLLDYV---REHKDNIGSQYLLNWCVQ--IAKGMNYLEDR 143
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA------QPIAAQRMISYKSPE 443
++H +L + N+L+ + V ++D+G + L+ + I + + E
Sbjct: 144 -------RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 444 YQSSKKISRKSDVWSFGCLLLELLT 468
+ + +SDVWS+G + EL+T
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 113/278 (40%), Gaps = 47/278 (16%)
Query: 274 EGLGKGIFGNSYKALLEGRAP------VVVKRLR-DL--KPLITEEFRKQLLVIADQKHP 324
E LG G FG + E AP V VK L+ D+ +P ++F +++ + H
Sbjct: 24 EKLGDGSFGVVRRG--EWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 81
Query: 325 NLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALE 384
NL+ L + K+ V + A G+L +R+ + + SR V VA +
Sbjct: 82 NLIRLYGVVLTPPMKM-VTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQ--VAEGMG 135
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ-----PIAAQRMISY 439
YL K IH +L + N+LL ++V + D+G + Q + R + +
Sbjct: 136 YLESK-------RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF 188
Query: 440 K--SPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEW 497
+PE ++ S SD W FG L E+ T G+NG S +L + +E
Sbjct: 189 AWCAPESLKTRTFSHASDTWMFGVTLWEMFT---YGQEPWIGLNG----SQILHKIDKE- 240
Query: 498 TAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRP 535
+ E Q + V +QC PE RP
Sbjct: 241 GERLPRPEDCPQ--------DIYNVMVQCWAHKPEDRP 270
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 113/278 (40%), Gaps = 47/278 (16%)
Query: 274 EGLGKGIFGNSYKALLEGRAP------VVVKRLR-DL--KPLITEEFRKQLLVIADQKHP 324
E LG G FG + E AP V VK L+ D+ +P ++F +++ + H
Sbjct: 14 EKLGDGSFGVVRRG--EWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 71
Query: 325 NLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALE 384
NL+ L + K+ V + A G+L +R+ + + SR V VA +
Sbjct: 72 NLIRLYGVVLTPPMKM-VTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQ--VAEGMG 125
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ-----PIAAQRMISY 439
YL K IH +L + N+LL ++V + D+G + Q + R + +
Sbjct: 126 YLESK-------RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF 178
Query: 440 K--SPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEW 497
+PE ++ S SD W FG L E+ T G+NG S +L + +E
Sbjct: 179 AWCAPESLKTRTFSHASDTWMFGVTLWEMFT---YGQEPWIGLNG----SQILHKIDKE- 230
Query: 498 TAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRP 535
+ E Q + V +QC PE RP
Sbjct: 231 GERLPRPEDCPQ--------DIYNVMVQCWAHKPEDRP 260
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 113/278 (40%), Gaps = 47/278 (16%)
Query: 274 EGLGKGIFGNSYKALLEGRAP------VVVKRLR-DL--KPLITEEFRKQLLVIADQKHP 324
E LG G FG + E AP V VK L+ D+ +P ++F +++ + H
Sbjct: 18 EKLGDGSFGVVRRG--EWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 75
Query: 325 NLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALE 384
NL+ L + K+ V + A G+L +R+ + + SR V VA +
Sbjct: 76 NLIRLYGVVLTPPMKM-VTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQ--VAEGMG 129
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ-----PIAAQRMISY 439
YL K IH +L + N+LL ++V + D+G + Q + R + +
Sbjct: 130 YLESK-------RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF 182
Query: 440 K--SPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEW 497
+PE ++ S SD W FG L E+ T G+NG S +L + +E
Sbjct: 183 AWCAPESLKTRTFSHASDTWMFGVTLWEMFT---YGQEPWIGLNG----SQILHKIDKE- 234
Query: 498 TAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRP 535
+ E Q + V +QC PE RP
Sbjct: 235 GERLPRPEDCPQ--------DIYNVMVQCWAHKPEDRP 264
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 151
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 152 IHSAD-------IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEI 204
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 205 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 250
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 113/278 (40%), Gaps = 47/278 (16%)
Query: 274 EGLGKGIFGNSYKALLEGRAP------VVVKRLR-DL--KPLITEEFRKQLLVIADQKHP 324
E LG G FG + E AP V VK L+ D+ +P ++F +++ + H
Sbjct: 24 EKLGDGSFGVVRRG--EWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 81
Query: 325 NLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALE 384
NL+ L + K+ V + A G+L +R+ + + SR V VA +
Sbjct: 82 NLIRLYGVVLTPPMKM-VTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQ--VAEGMG 135
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ-----PIAAQRMISY 439
YL K IH +L + N+LL ++V + D+G + Q + R + +
Sbjct: 136 YLESK-------RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPF 188
Query: 440 K--SPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEW 497
+PE ++ S SD W FG L E+ T G+NG S +L + +E
Sbjct: 189 AWCAPESLKTRTFSHASDTWMFGVTLWEMFT---YGQEPWIGLNG----SQILHKIDKE- 240
Query: 498 TAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRP 535
+ E Q + V +QC PE RP
Sbjct: 241 GERLPRPEDCPQ--------DIYNVMVQCWAHKPEDRP 270
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 113/278 (40%), Gaps = 47/278 (16%)
Query: 274 EGLGKGIFGNSYKALLEGRAP------VVVKRLR-DL--KPLITEEFRKQLLVIADQKHP 324
E LG G FG + E AP V VK L+ D+ +P ++F +++ + H
Sbjct: 14 EKLGDGSFGVVRRG--EWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 71
Query: 325 NLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALE 384
NL+ L + K+ V + A G+L +R+ + + SR V VA +
Sbjct: 72 NLIRLYGVVLTPPMKM-VTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQ--VAEGMG 125
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ-----PIAAQRMISY 439
YL K IH +L + N+LL ++V + D+G + Q + R + +
Sbjct: 126 YLESK-------RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF 178
Query: 440 K--SPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEW 497
+PE ++ S SD W FG L E+ T G+NG S +L + +E
Sbjct: 179 AWCAPESLKTRTFSHASDTWMFGVTLWEMFT---YGQEPWIGLNG----SQILHKIDKE- 230
Query: 498 TAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRP 535
+ E Q + V +QC PE RP
Sbjct: 231 GERLPRPEDCPQ--------DIYNVMVQCWAHKPEDRP 260
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 92/204 (45%), Gaps = 25/204 (12%)
Query: 276 LGKGIFGNSYKALLEGRAPVV-VKRLRDLK--PLITEEFRKQLLVIADQKHPNLLPLLAY 332
+G+G +G +K +V +K+ + + P+I + +++ ++ KHPNL+ LL
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 333 YFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKS 392
+ LV+++ + L H + +P + +A+ + H
Sbjct: 71 FRRKRRLHLVFEYCDHTVL----HELDRYQRGVPEHLVKS--ITWQTLQAVNFCH----- 119
Query: 393 RTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI------AAQRMISYKSPE-YQ 445
+ IH ++K NIL+ + ++ + D+GF+ L+ P A R Y+SPE
Sbjct: 120 --KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRW--YRSPELLV 175
Query: 446 SSKKISRKSDVWSFGCLLLELLTG 469
+ DVW+ GC+ ELL+G
Sbjct: 176 GDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 113/278 (40%), Gaps = 47/278 (16%)
Query: 274 EGLGKGIFGNSYKALLEGRAP------VVVKRLR-DL--KPLITEEFRKQLLVIADQKHP 324
E LG G FG + E AP V VK L+ D+ +P ++F +++ + H
Sbjct: 14 EKLGDGSFGVVRRG--EWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 71
Query: 325 NLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALE 384
NL+ L + K+ V + A G+L +R+ + + SR V VA +
Sbjct: 72 NLIRLYGVVLTPPMKM-VTELAPLGSLLDRL---RKHQGHFLLGTLSRYAVQ--VAEGMG 125
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ-----PIAAQRMISY 439
YL K IH +L + N+LL ++V + D+G + Q + R + +
Sbjct: 126 YLESK-------RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPF 178
Query: 440 K--SPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEW 497
+PE ++ S SD W FG L E+ T G+NG S +L + +E
Sbjct: 179 AWCAPESLKTRTFSHASDTWMFGVTLWEMFT---YGQEPWIGLNG----SQILHKIDKE- 230
Query: 498 TAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRP 535
+ E Q + V +QC PE RP
Sbjct: 231 GERLPRPEDCPQ--------DIYNVMVQCWAHKPEDRP 260
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 95/213 (44%), Gaps = 25/213 (11%)
Query: 265 LNDLLKAPAEGLGKGIFGNSYKALLEG-RAPVVVKRLRDLKPLITEEFRKQLLVIADQKH 323
L+D + +E LG+G Y+ +G + P +K L+ K + + R ++ V+ H
Sbjct: 51 LSDFFEVESE-LGRGATSIVYRCKQKGTQKPYALKVLK--KTVDKKIVRTEIGVLLRLSH 107
Query: 324 PNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRI-HGGKSSKNRIPFRCRSRLLVARGVARA 382
PN++ L + + E LV + G LF+RI G S+ R + + A
Sbjct: 108 PNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSE-------RDAADAVKQILEA 160
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDD---NEMVLVSDYGFSSLVAQPIAAQRMI-- 437
+ YLH ++ ++H +LK N+L + + ++D+G S +V + + +
Sbjct: 161 VAYLH-------ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGT 213
Query: 438 -SYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
Y +PE + D+WS G + LL G
Sbjct: 214 PGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 140
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 141 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 239
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCAKLTDDHVQF-------LIYQILRGLKY 136
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 137 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 189
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 235
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLN--NIVKXQKLTDDHVQF-------LIYQILRGLKY 140
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 141 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 239
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 99/208 (47%), Gaps = 24/208 (11%)
Query: 273 AEGLGKGIFGNSYKAL--LEGRAPVVVKRLR---DLKPLITEEFRKQLLVIADQKHPNLL 327
E +G+G +G YKA L G V +K++R + + + + R ++ ++ + HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIV 65
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
LL + ++ LV++F + +L + + + +P +S L + + L + H
Sbjct: 66 KLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPL-IKSYLF---QLLQGLAFCH 120
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE 443
V+H +LK N+L++ + ++D+G + P+ + Y++PE
Sbjct: 121 -------SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 173
Query: 444 -YQSSKKISRKSDVWSFGCLLLELLTGR 470
K S D+WS GC+ E++T R
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 128/305 (41%), Gaps = 55/305 (18%)
Query: 276 LGKGIFGNSYKAL---LEGRA---PVVVKRLRD-LKPLITEEFRKQLLVIADQKHPNLLP 328
LG+G FG KA L+GRA V VK L++ P + + V+ HP+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 329 LLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKS------------------SKNRIPFRCR 370
L + LL+ ++A G+L + + +
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 371 SRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP 430
+ A +++ ++YL + +++H +L + NIL+ + + +SD+G S V +
Sbjct: 151 DLISFAWQISQGMQYL-------AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 431 IAAQRM------ISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGAD 484
+ + + + + E + +SDVWSFG LL E++T + + P GI
Sbjct: 204 DSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT--LGGNPYP-GIPPER 260
Query: 485 LCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
L + + R E + + M +L+ +QC + P+KRP A++ +L
Sbjct: 261 LFNLLKTGHRME-----------RPDNCSEEMYRLM---LQCWKQEPDKRPVFADISKDL 306
Query: 545 EIIKV 549
E + V
Sbjct: 307 EKMMV 311
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 273 AEGLGKGIFGNSYKAL--LEGRAPVVVK-RLRDLKPLITEEFRKQLLVIADQKHPNLLPL 329
E +G+G +G YKA L G + K RL + +++ ++ + HPN++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
L + ++ LV++F + +L + + +P +S L + + L + H
Sbjct: 68 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL-IKSYLF---QLLQGLAFCH-- 120
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE-Y 444
V+H +LK N+L++ + ++D+G + P+ + Y++PE
Sbjct: 121 -----SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 445 QSSKKISRKSDVWSFGCLLLELLTGR 470
K S D+WS GC+ E++T R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 273 AEGLGKGIFGNSYKAL--LEGRAPVVVK-RLRDLKPLITEEFRKQLLVIADQKHPNLLPL 329
E +G+G +G YKA L G + K RL + +++ ++ + HPN++ L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
L + ++ LV++F + +L + + +P +S L + + L + H
Sbjct: 67 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL-IKSYLF---QLLQGLAFCH-- 119
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE-Y 444
V+H +LK N+L++ + ++D+G + P+ + Y++PE
Sbjct: 120 -----SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 174
Query: 445 QSSKKISRKSDVWSFGCLLLELLTGR 470
K S D+WS GC+ E++T R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 140
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 141 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 239
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 140
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 141 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 239
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 140
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 141 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 239
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 68/167 (40%), Gaps = 27/167 (16%)
Query: 322 KHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVAR 381
+HPN++ L Y +V + G L ++I K F R V + +
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF------FSEREASAVLFTITK 127
Query: 382 ALEYLHHKDKSRTQSAVIHGNLKSTNILLDDN----EMVLVSDYGFS-------SLVAQP 430
+EYLH + V+H +LK +NIL D E + + D+GF+ L+ P
Sbjct: 128 TVEYLHAQ-------GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTP 180
Query: 431 IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP 477
++ PE + D+WS G LL +LTG + P
Sbjct: 181 CYTANFVA---PEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGP 224
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 140
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 141 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 239
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 145
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 146 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 198
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 244
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 89 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 139
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 140 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 192
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 193 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 238
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 147
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 148 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 200
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 246
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 94/208 (45%), Gaps = 24/208 (11%)
Query: 273 AEGLGKGIFGNSYKAL--LEGRAPVVVKRLR---DLKPLITEEFRKQLLVIADQKHPNLL 327
E +G+G +G YKA L G V +K++R + + + + R ++ ++ + HPN++
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIV 68
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
LL + ++ LV++F + S+ IP L + + L + H
Sbjct: 69 KLLDVIHTENKLYLVFEFLHQDL---KTFMDASALTGIPLPLIKSYLFQ--LLQGLAFCH 123
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE 443
V+H +LK N+L++ + ++D+G + P+ + Y++PE
Sbjct: 124 -------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 176
Query: 444 -YQSSKKISRKSDVWSFGCLLLELLTGR 470
K S D+WS GC+ E++T R
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 140
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 141 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 239
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 140
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 141 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATRWYRAPEI 193
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 239
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 142
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 143 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 195
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 241
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 142
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 143 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 195
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 241
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 145
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 146 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 198
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 244
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 140
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 141 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 239
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 99/208 (47%), Gaps = 24/208 (11%)
Query: 273 AEGLGKGIFGNSYKAL--LEGRAPVVVKRLR---DLKPLITEEFRKQLLVIADQKHPNLL 327
E +G+G +G YKA L G V +K++R + + + + R ++ ++ + HPN++
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIV 67
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
LL + ++ LV++F + +L + + + +P +S L + + L + H
Sbjct: 68 KLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPL-IKSYLF---QLLQGLAFCH 122
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE 443
V+H +LK N+L++ + ++D+G + P+ + Y++PE
Sbjct: 123 -------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 175
Query: 444 -YQSSKKISRKSDVWSFGCLLLELLTGR 470
K S D+WS GC+ E++T R
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 99/229 (43%), Gaps = 32/229 (13%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKP--LITEEFRKQLLVIADQKHPNLLPLLA 331
E +G+G +G YKA +K++R K I +++ ++ + KH N++ L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 332 YYFSNDEKLLVYKFAGNG--NLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
+ +LV++ L + GG S F L + G+A Y H +
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL----LQLLNGIA----YCHDR 119
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE-Y 444
V+H +LK N+L++ + ++D+G + P+ + Y++P+
Sbjct: 120 -------RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVL 172
Query: 445 QSSKKISRKSDVWSFGCLLLELLTGRISTHSAP--QGINGADLCSWVLR 491
SKK S D+WS GC+ E++ G AP G++ AD + R
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNG------APLFPGVSEADQLMRIFR 215
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 163
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI---AAQRMISYKSP 442
+H D +IH +LK +N+ ++++ + + D+G + + A R Y++P
Sbjct: 164 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATRW--YRAP 214
Query: 443 EYQ-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
E + ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 215 EIMLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 262
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 142
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 143 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 195
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 241
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 24/208 (11%)
Query: 273 AEGLGKGIFGNSYKAL--LEGRAPVVVKRLR---DLKPLITEEFRKQLLVIADQKHPNLL 327
E +G+G +G YKA L G V +K++R + + + + R ++ ++ + HPN++
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIV 64
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
LL + ++ LV++F + +L + + +P +S L + + L + H
Sbjct: 65 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL-IKSYLF---QLLQGLAFCH 119
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE 443
V+H +LK N+L++ + ++D+G + P+ + Y++PE
Sbjct: 120 -------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 172
Query: 444 -YQSSKKISRKSDVWSFGCLLLELLTGR 470
K S D+WS GC+ E++T R
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 24/208 (11%)
Query: 273 AEGLGKGIFGNSYKAL--LEGRAPVVVKRLR---DLKPLITEEFRKQLLVIADQKHPNLL 327
E +G+G +G YKA L G V +K++R + + + + R ++ ++ + HPN++
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIV 64
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
LL + ++ LV++F + +L + + +P +S L + + L + H
Sbjct: 65 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL-IKSYLF---QLLQGLAFCH 119
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE 443
V+H +LK N+L++ + ++D+G + P+ + Y++PE
Sbjct: 120 -------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 172
Query: 444 -YQSSKKISRKSDVWSFGCLLLELLTGR 470
K S D+WS GC+ E++T R
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 146
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 147 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 199
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 245
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 160
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 161 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 213
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 259
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 100 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 150
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 151 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 203
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 204 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 249
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 24/208 (11%)
Query: 273 AEGLGKGIFGNSYKAL--LEGRAPVVVKRLR---DLKPLITEEFRKQLLVIADQKHPNLL 327
E +G+G +G YKA L G V +K++R + + + + R ++ ++ + HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIV 65
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
LL + ++ LV++F + +L + + +P +S L + + L + H
Sbjct: 66 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL-IKSYLF---QLLQGLAFCH 120
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE 443
V+H +LK N+L++ + ++D+G + P+ + Y++PE
Sbjct: 121 -------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 173
Query: 444 -YQSSKKISRKSDVWSFGCLLLELLTGR 470
K S D+WS GC+ E++T R
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 152
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 153 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 205
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 251
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 152
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 153 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 205
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 251
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 99/208 (47%), Gaps = 24/208 (11%)
Query: 273 AEGLGKGIFGNSYKAL--LEGRAPVVVKRLR---DLKPLITEEFRKQLLVIADQKHPNLL 327
E +G+G +G YKA L G V +K++R + + + + R ++ ++ + HPN++
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIV 68
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
LL + ++ LV++F + +L + + + +P +S L + + L + H
Sbjct: 69 KLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPL-IKSYLF---QLLQGLAFCH 123
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE 443
V+H +LK N+L++ + ++D+G + P+ + Y++PE
Sbjct: 124 -------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 176
Query: 444 -YQSSKKISRKSDVWSFGCLLLELLTGR 470
K S D+WS GC+ E++T R
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 24/208 (11%)
Query: 273 AEGLGKGIFGNSYKAL--LEGRAPVVVKRLR---DLKPLITEEFRKQLLVIADQKHPNLL 327
E +G+G +G YKA L G V +K++R + + + + R ++ ++ + HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIV 65
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
LL + ++ LV++F + +L + + +P +S L + + L + H
Sbjct: 66 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL-IKSYLF---QLLQGLAFCH 120
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE 443
V+H +LK N+L++ + ++D+G + P+ + Y++PE
Sbjct: 121 -------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 173
Query: 444 -YQSSKKISRKSDVWSFGCLLLELLTGR 470
K S D+WS GC+ E++T R
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 146
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 147 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 199
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 245
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 276 LGKGIFGNSYKALL--EG---RAPVVVKRLRD-LKPLITEEFRKQLLVIADQKHPNLLPL 329
LG G FG YK + +G + PV +K LR+ P +E + V+A P + L
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
L ++ +L V + G L + + +NR + L +A+ + YL
Sbjct: 85 LGICLTSTVQL-VTQLMPYGCLLDHVR-----ENRGRLGSQDLLNWCMQIAKGMSYLE-- 136
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA------QPIAAQRMISYKSPE 443
++H +L + N+L+ V ++D+G + L+ + I + + E
Sbjct: 137 -----DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALE 191
Query: 444 YQSSKKISRKSDVWSFGCLLLELLT 468
++ + +SDVWS+G + EL+T
Sbjct: 192 SILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 137
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 138 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 190
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 191 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 236
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 137
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 138 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 190
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 191 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 236
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 24/208 (11%)
Query: 273 AEGLGKGIFGNSYKAL--LEGRAPVVVKRLR---DLKPLITEEFRKQLLVIADQKHPNLL 327
E +G+G +G YKA L G V +K++R + + + + R ++ ++ + HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIV 65
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
LL + ++ LV++F + +L + + +P +S L + + L + H
Sbjct: 66 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL-IKSYLF---QLLQGLSFCH 120
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE 443
V+H +LK N+L++ + ++D+G + P+ + Y++PE
Sbjct: 121 -------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 173
Query: 444 -YQSSKKISRKSDVWSFGCLLLELLTGR 470
K S D+WS GC+ E++T R
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 136
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 137 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 189
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 235
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 24/208 (11%)
Query: 273 AEGLGKGIFGNSYKAL--LEGRAPVVVKRLR---DLKPLITEEFRKQLLVIADQKHPNLL 327
E +G+G +G YKA L G V +K++R + + + + R ++ ++ + HPN++
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIV 64
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
LL + ++ LV++F + +L + + +P +S L + + L + H
Sbjct: 65 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL-IKSYLF---QLLQGLAFCH 119
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE 443
V+H +LK N+L++ + ++D+G + P+ + Y++PE
Sbjct: 120 -------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 172
Query: 444 -YQSSKKISRKSDVWSFGCLLLELLTGR 470
K S D+WS GC+ E++T R
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 151
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 152 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 204
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 205 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 250
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 24/208 (11%)
Query: 273 AEGLGKGIFGNSYKAL--LEGRAPVVVKRLR---DLKPLITEEFRKQLLVIADQKHPNLL 327
E +G+G +G YKA L G V +K++R + + + + R ++ ++ + HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIV 65
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
LL + ++ LV++F + +L + + +P +S L + + L + H
Sbjct: 66 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL-IKSYLF---QLLQGLAFCH 120
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE 443
V+H +LK N+L++ + ++D+G + P+ + Y++PE
Sbjct: 121 -------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 173
Query: 444 -YQSSKKISRKSDVWSFGCLLLELLTGR 470
K S D+WS GC+ E++T R
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 276 LGKGIFGNSYKALL--EG---RAPVVVKRLRD-LKPLITEEFRKQLLVIADQKHPNLLPL 329
L G FG YK L EG + PV +K LR+ P +E + V+A +P++ L
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
L ++ +L++ + G L + + + K+ I + V +A+ + YL +
Sbjct: 90 LGICLTSTVQLIM-QLMPFGCLLDYV---REHKDNIGSQYLLNWCVQ--IAKGMNYLEDR 143
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA------QPIAAQRMISYKSPE 443
++H +L + N+L+ + V ++D+G + L+ + I + + E
Sbjct: 144 -------RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 444 YQSSKKISRKSDVWSFGCLLLELLT 468
+ + +SDVWS+G + EL+T
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 159
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 160 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 212
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 213 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 258
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 24/208 (11%)
Query: 273 AEGLGKGIFGNSYKAL--LEGRAPVVVKRLR---DLKPLITEEFRKQLLVIADQKHPNLL 327
E +G+G +G YKA L G V +K++R + + + + R ++ ++ + HPN++
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIV 66
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
LL + ++ LV++F + +L + + +P +S L + + L + H
Sbjct: 67 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL-IKSYLF---QLLQGLAFCH 121
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE 443
V+H +LK N+L++ + ++D+G + P+ + Y++PE
Sbjct: 122 -------SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 174
Query: 444 -YQSSKKISRKSDVWSFGCLLLELLTGR 470
K S D+WS GC+ E++T R
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 24/208 (11%)
Query: 273 AEGLGKGIFGNSYKAL--LEGRAPVVVKRLR---DLKPLITEEFRKQLLVIADQKHPNLL 327
E +G+G +G YKA L G V +K++R + + + + R ++ ++ + HPN++
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIV 66
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
LL + ++ LV++F + +L + + +P +S L + + L + H
Sbjct: 67 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL-IKSYLF---QLLQGLAFCH 121
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE 443
V+H +LK N+L++ + ++D+G + P+ + Y++PE
Sbjct: 122 -------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 174
Query: 444 -YQSSKKISRKSDVWSFGCLLLELLTGR 470
K S D+WS GC+ E++T R
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 140
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 141 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 239
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 24/205 (11%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKP--LITEEFRKQLLVIADQKHPNLLPLLA 331
E +G+G +G YKA +K++R K I +++ ++ + KH N++ L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 332 YYFSNDEKLLVYKFAGNG--NLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
+ +LV++ L + GG S F L + G+A Y H +
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL----LQLLNGIA----YCHDR 119
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE-Y 444
V+H +LK N+L++ + ++D+G + P+ + Y++P+
Sbjct: 120 -------RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVL 172
Query: 445 QSSKKISRKSDVWSFGCLLLELLTG 469
SKK S D+WS GC+ E++ G
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 160
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 161 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATRWYRAPEI 213
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 259
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 146
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 147 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 199
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 245
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 24/205 (11%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKP--LITEEFRKQLLVIADQKHPNLLPLLA 331
E +G+G +G YKA +K++R K I +++ ++ + KH N++ L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 332 YYFSNDEKLLVYKFAGNG--NLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
+ +LV++ L + GG S F L + G+A Y H +
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL----LQLLNGIA----YCHDR 119
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPEY- 444
V+H +LK N+L++ + ++D+G + P+ + Y++P+
Sbjct: 120 -------RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVL 172
Query: 445 QSSKKISRKSDVWSFGCLLLELLTG 469
SKK S D+WS GC+ E++ G
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 160
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 161 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 213
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 259
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 136
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 137 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 189
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 235
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 24/208 (11%)
Query: 273 AEGLGKGIFGNSYKAL--LEGRAPVVVKRLR---DLKPLITEEFRKQLLVIADQKHPNLL 327
E +G+G +G YKA L G V +K++R + + + + R ++ ++ + HPN++
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIV 68
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
LL + ++ LV++F + +L + + +P +S L + + L + H
Sbjct: 69 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL-IKSYLF---QLLQGLAFCH 123
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE 443
V+H +LK N+L++ + ++D+G + P+ + Y++PE
Sbjct: 124 -------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 176
Query: 444 -YQSSKKISRKSDVWSFGCLLLELLTGR 470
K S D+WS GC+ E++T R
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 24/208 (11%)
Query: 273 AEGLGKGIFGNSYKAL--LEGRAPVVVKRLR---DLKPLITEEFRKQLLVIADQKHPNLL 327
E +G+G +G YKA L G V +K++R + + + + R ++ ++ + HPN++
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIV 67
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
LL + ++ LV++F + +L + + +P +S L + + L + H
Sbjct: 68 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL-IKSYLF---QLLQGLAFCH 122
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE 443
V+H +LK N+L++ + ++D+G + P+ + Y++PE
Sbjct: 123 -------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 175
Query: 444 -YQSSKKISRKSDVWSFGCLLLELLTGR 470
K S D+WS GC+ E++T R
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 24/208 (11%)
Query: 273 AEGLGKGIFGNSYKAL--LEGRAPVVVKRLR---DLKPLITEEFRKQLLVIADQKHPNLL 327
E +G+G +G YKA L G V +K++R + + + + R ++ ++ + HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIV 65
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
LL + ++ LV++F + +L + + +P +S L + + L + H
Sbjct: 66 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL-IKSYLF---QLLQGLAFCH 120
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE 443
V+H +LK N+L++ + ++D+G + P+ + Y++PE
Sbjct: 121 -------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 173
Query: 444 -YQSSKKISRKSDVWSFGCLLLELLTGR 470
K S D+WS GC+ E++T R
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 24/208 (11%)
Query: 273 AEGLGKGIFGNSYKAL--LEGRAPVVVKRLR---DLKPLITEEFRKQLLVIADQKHPNLL 327
E +G+G +G YKA L G V +K++R + + + + R ++ ++ + HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIV 65
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
LL + ++ LV++F + +L + + +P +S L + + L + H
Sbjct: 66 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL-IKSYLF---QLLQGLAFCH 120
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE 443
V+H +LK N+L++ + ++D+G + P+ + Y++PE
Sbjct: 121 -------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 173
Query: 444 -YQSSKKISRKSDVWSFGCLLLELLTGR 470
K S D+WS GC+ E++T R
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 24/208 (11%)
Query: 273 AEGLGKGIFGNSYKAL--LEGRAPVVVKRLR---DLKPLITEEFRKQLLVIADQKHPNLL 327
E +G+G +G YKA L G V +K++R + + + + R ++ ++ + HPN++
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIV 66
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
LL + ++ LV++F + +L + + +P +S L + + L + H
Sbjct: 67 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL-IKSYLF---QLLQGLAFCH 121
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE 443
V+H +LK N+L++ + ++D+G + P+ + Y++PE
Sbjct: 122 -------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 174
Query: 444 -YQSSKKISRKSDVWSFGCLLLELLTGR 470
K S D+WS GC+ E++T R
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 127/305 (41%), Gaps = 55/305 (18%)
Query: 276 LGKGIFGNSYKAL---LEGRA---PVVVKRLRD-LKPLITEEFRKQLLVIADQKHPNLLP 328
LG+G FG KA L+GRA V VK L++ P + + V+ HP+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 329 LLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKS------------------SKNRIPFRCR 370
L + LL+ ++A G+L + + +
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 371 SRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP 430
+ A +++ ++YL + ++H +L + NIL+ + + +SD+G S V +
Sbjct: 151 DLISFAWQISQGMQYL-------AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 431 IAAQRM------ISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGAD 484
+ + + + + E + +SDVWSFG LL E++T + + P GI
Sbjct: 204 DSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT--LGGNPYP-GIPPER 260
Query: 485 LCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
L + + R E + + M +L+ +QC + P+KRP A++ +L
Sbjct: 261 LFNLLKTGHRME-----------RPDNCSEEMYRLM---LQCWKQEPDKRPVFADISKDL 306
Query: 545 EIIKV 549
E + V
Sbjct: 307 EKMMV 311
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 24/208 (11%)
Query: 273 AEGLGKGIFGNSYKAL--LEGRAPVVVKRLR---DLKPLITEEFRKQLLVIADQKHPNLL 327
E +G+G +G YKA L G V +K++R + + + + R ++ ++ + HPN++
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIV 64
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
LL + ++ LV++F + +L + + +P +S L + + L + H
Sbjct: 65 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL-IKSYLF---QLLQGLAFCH 119
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE 443
V+H +LK N+L++ + ++D+G + P+ + Y++PE
Sbjct: 120 -------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 172
Query: 444 -YQSSKKISRKSDVWSFGCLLLELLTGR 470
K S D+WS GC+ E++T R
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 24/208 (11%)
Query: 273 AEGLGKGIFGNSYKAL--LEGRAPVVVKRLR---DLKPLITEEFRKQLLVIADQKHPNLL 327
E +G+G +G YKA L G V +K++R + + + + R ++ ++ + HPN++
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIV 69
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
LL + ++ LV++F + +L + + +P +S L + + L + H
Sbjct: 70 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL-IKSYLF---QLLQGLAFCH 124
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE 443
V+H +LK N+L++ + ++D+G + P+ + Y++PE
Sbjct: 125 -------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 177
Query: 444 -YQSSKKISRKSDVWSFGCLLLELLTGR 470
K S D+WS GC+ E++T R
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 24/208 (11%)
Query: 273 AEGLGKGIFGNSYKAL--LEGRAPVVVKRLR---DLKPLITEEFRKQLLVIADQKHPNLL 327
E +G+G +G YKA L G V +K++R + + + + R ++ ++ + HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIV 65
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
LL + ++ LV++F + +L + + +P +S L + + L + H
Sbjct: 66 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL-IKSYLF---QLLQGLAFCH 120
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE 443
V+H +LK N+L++ + ++D+G + P+ + Y++PE
Sbjct: 121 -------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 173
Query: 444 -YQSSKKISRKSDVWSFGCLLLELLTGR 470
K S D+WS GC+ E++T R
Sbjct: 174 ILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 24/208 (11%)
Query: 273 AEGLGKGIFGNSYKAL--LEGRAPVVVKRLR---DLKPLITEEFRKQLLVIADQKHPNLL 327
E +G+G +G YKA L G V +K++R + + + + R ++ ++ + HPN++
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIV 68
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
LL + ++ LV++F + +L + + +P +S L + + L + H
Sbjct: 69 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL-IKSYLF---QLLQGLAFCH 123
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE 443
V+H +LK N+L++ + ++D+G + P+ + Y++PE
Sbjct: 124 -------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 176
Query: 444 -YQSSKKISRKSDVWSFGCLLLELLTGR 470
K S D+WS GC+ E++T R
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 163
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 164 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 216
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 217 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 262
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 159
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 160 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 212
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 213 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 258
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 24/208 (11%)
Query: 273 AEGLGKGIFGNSYKAL--LEGRAPVVVKRLR---DLKPLITEEFRKQLLVIADQKHPNLL 327
E +G+G +G YKA L G V +K++R + + + + R ++ ++ + HPN++
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIV 67
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
LL + ++ LV++F + +L + + +P +S L + + L + H
Sbjct: 68 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL-IKSYLF---QLLQGLAFCH 122
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE 443
V+H +LK N+L++ + ++D+G + P+ + Y++PE
Sbjct: 123 -------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 175
Query: 444 -YQSSKKISRKSDVWSFGCLLLELLTGR 470
K S D+WS GC+ E++T R
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 24/208 (11%)
Query: 273 AEGLGKGIFGNSYKAL--LEGRAPVVVKRLR---DLKPLITEEFRKQLLVIADQKHPNLL 327
E +G+G +G YKA L G V +K++R + + + + R ++ ++ + HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIV 65
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
LL + ++ LV++F + +L + + +P +S L + + L + H
Sbjct: 66 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL-IKSYLF---QLLQGLAFCH 120
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE 443
V+H +LK N+L++ + ++D+G + P+ + Y++PE
Sbjct: 121 -------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 173
Query: 444 -YQSSKKISRKSDVWSFGCLLLELLTGR 470
K S D+WS GC+ E++T R
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 24/208 (11%)
Query: 273 AEGLGKGIFGNSYKAL--LEGRAPVVVKRLR---DLKPLITEEFRKQLLVIADQKHPNLL 327
E +G+G +G YKA L G V +K++R + + + + R ++ ++ + HPN++
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIV 69
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
LL + ++ LV++F + +L + + +P +S L + + L + H
Sbjct: 70 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL-IKSYLF---QLLQGLAFCH 124
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE 443
V+H +LK N+L++ + ++D+G + P+ + Y++PE
Sbjct: 125 -------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 177
Query: 444 -YQSSKKISRKSDVWSFGCLLLELLTGR 470
K S D+WS GC+ E++T R
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 273 AEGLGKGIFGNSYKAL--LEGRAPVVVKRLR---DLKPLITEEFRKQLLVIADQKHPNLL 327
E +G+G +G YKA L G V +K++R + + + + R ++ ++ + HPN++
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIV 68
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
LL + ++ LV++F ++ + S+ IP L + + L + H
Sbjct: 69 KLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQ--LLQGLAFCH 123
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE 443
V+H +LK N+L++ + ++D+G + P+ + Y++PE
Sbjct: 124 -------SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 176
Query: 444 -YQSSKKISRKSDVWSFGCLLLELLTGR 470
K S D+WS GC+ E++T R
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 24/208 (11%)
Query: 273 AEGLGKGIFGNSYKAL--LEGRAPVVVKRLR---DLKPLITEEFRKQLLVIADQKHPNLL 327
E +G+G +G YKA L G V +K++R + + + + R ++ ++ + HPN++
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIV 72
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
LL + ++ LV++F + +L + + +P +S L + + L + H
Sbjct: 73 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL-IKSYLF---QLLQGLAFCH 127
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE 443
V+H +LK N+L++ + ++D+G + P+ + Y++PE
Sbjct: 128 -------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 180
Query: 444 -YQSSKKISRKSDVWSFGCLLLELLTGR 470
K S D+WS GC+ E++T R
Sbjct: 181 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 24/208 (11%)
Query: 273 AEGLGKGIFGNSYKAL--LEGRAPVVVKRLR---DLKPLITEEFRKQLLVIADQKHPNLL 327
E +G+G +G YKA L G V +K++R + + + + R ++ ++ + HPN++
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIV 67
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
LL + ++ LV++F + +L + + +P +S L + + L + H
Sbjct: 68 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL-IKSYLF---QLLQGLAFCH 122
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE 443
V+H +LK N+L++ + ++D+G + P+ + Y++PE
Sbjct: 123 -------SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 175
Query: 444 -YQSSKKISRKSDVWSFGCLLLELLTGR 470
K S D+WS GC+ E++T R
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 273 AEGLGKGIFGNSYKAL--LEGRAPVVVKRLR---DLKPLITEEFRKQLLVIADQKHPNLL 327
E +G+G +G YKA L G V +K++R + + + + R ++ ++ + HPN++
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIV 66
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
LL + ++ LV++F ++ + S+ IP L + + L + H
Sbjct: 67 KLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQ--LLQGLAFCH 121
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE 443
V+H +LK N+L++ + ++D+G + P+ + Y++PE
Sbjct: 122 -------SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 174
Query: 444 -YQSSKKISRKSDVWSFGCLLLELLTGR 470
K S D+WS GC+ E++T R
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 99/230 (43%), Gaps = 48/230 (20%)
Query: 272 PAEGLGKGIFGNSYKALLEGRAPV-----VVKRLR-DLKPLITEEFRKQLLVIADQKHPN 325
P + LG+G FG + E + V +KR+R + L E+ +++ +A +HP
Sbjct: 9 PIQCLGRGGFG----VVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 326 LLPLLAYYFSND--EKL----------LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRL 373
++ + + EKL + + NL + ++G + + R C L
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVC---L 121
Query: 374 LVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAA 433
+ +A A+E+LH K ++H +LK +NI +++V V D+G + + Q
Sbjct: 122 HIFLQIAEAVEFLHSK-------GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEE 174
Query: 434 QRMIS----------------YKSPEYQSSKKISRKSDVWSFGCLLLELL 467
Q +++ Y SPE S K D++S G +L ELL
Sbjct: 175 QTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 24/208 (11%)
Query: 273 AEGLGKGIFGNSYKAL--LEGRAPVVVKRLR---DLKPLITEEFRKQLLVIADQKHPNLL 327
E +G+G +G YKA L G V +K++R + + + + R ++ ++ + HPN++
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIV 66
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
LL + ++ LV++F + +L + + +P +S L + + L + H
Sbjct: 67 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL-IKSYLF---QLLQGLAFCH 121
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE 443
V+H +LK N+L++ + ++D+G + P+ + Y++PE
Sbjct: 122 -------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 174
Query: 444 -YQSSKKISRKSDVWSFGCLLLELLTGR 470
K S D+WS GC+ E++T R
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 24/208 (11%)
Query: 273 AEGLGKGIFGNSYKAL--LEGRAPVVVKRLR---DLKPLITEEFRKQLLVIADQKHPNLL 327
E +G+G +G YKA L G V +K++R + + + + R ++ ++ + HPN++
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIV 72
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
LL + ++ LV++F + +L + + +P +S L + + L + H
Sbjct: 73 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPL-IKSYLF---QLLQGLAFCH 127
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE 443
V+H +LK N+L++ + ++D+G + P+ + Y++PE
Sbjct: 128 -------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 180
Query: 444 -YQSSKKISRKSDVWSFGCLLLELLTGR 470
K S D+WS GC+ E++T R
Sbjct: 181 ILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 88 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 138
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 139 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 191
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 192 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 237
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 24/157 (15%)
Query: 323 HPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARA 382
HPN++ L Y +N LV+ G LF+ + ++ + + R +
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL------TEKVTLSEKETRKIMRALLEV 123
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI----S 438
+ LH + ++H +LK NILLDD+ + ++D+GFS + P R + S
Sbjct: 124 ICALHKLN-------IVHRDLKPENILLDDDMNIKLTDFGFSCQL-DPGEKLREVCGTPS 175
Query: 439 YKSPEY------QSSKKISRKSDVWSFGCLLLELLTG 469
Y +PE + ++ D+WS G ++ LL G
Sbjct: 176 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 44/215 (20%)
Query: 276 LGKGIFGN---SYKALLEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLL 330
+G G +G+ +Y A L R V VK+L R + LI ++L ++ KH N++ LL
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 331 AYY--------FSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARA 382
+ FS E LV G +L N + S + F L R
Sbjct: 94 DVFTPATSIEDFS--EVYLVTTLMG-ADLNNIVKSQALSDEHVQFLVYQLL-------RG 143
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYKSP 442
L+Y+H + +IH +LK +N+ ++++ + + D+G + A + M Y +
Sbjct: 144 LKYIH-------SAGIIHRDLKPSNVAVNEDSELRILDFGLARQ-----ADEEMTGYVAT 191
Query: 443 EYQSSKKI-------SRKSDVWSFGCLLLELLTGR 470
+ + +I ++ D+WS GC++ ELL G+
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 24/157 (15%)
Query: 323 HPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARA 382
HPN++ L Y +N LV+ G LF+ + ++ + + R +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL------TEKVTLSEKETRKIMRALLEV 136
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI----S 438
+ LH + ++H +LK NILLDD+ + ++D+GFS + P R + S
Sbjct: 137 ICALH-------KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL-DPGEKLREVCGTPS 188
Query: 439 YKSPEY------QSSKKISRKSDVWSFGCLLLELLTG 469
Y +PE + ++ D+WS G ++ LL G
Sbjct: 189 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 93/205 (45%), Gaps = 25/205 (12%)
Query: 276 LGKGIFGNSYKALL--EG---RAPVVVKRLRD-LKPLITEEFRKQLLVIADQKHPNLLPL 329
L G FG YK L EG + PV +K LR+ P +E + V+A +P++ L
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
L ++ +L+ + G L + + + K+ I + V +A+ + YL +
Sbjct: 90 LGICLTSTVQLIT-QLMPFGCLLDYV---REHKDNIGSQYLLNWCVQ--IAKGMNYLEDR 143
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA------QPIAAQRMISYKSPE 443
++H +L + N+L+ + V ++D+G + L+ + I + + E
Sbjct: 144 -------RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 444 YQSSKKISRKSDVWSFGCLLLELLT 468
+ + +SDVWS+G + EL+T
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 90/203 (44%), Gaps = 23/203 (11%)
Query: 276 LGKGIFGNSYKALLEG----RAPVVVKRLR-DLKPLITEEFRKQLLVIADQKHPNLLPLL 330
LG+G FG Y+ + + V VK + D E+F + +++ + HP+++ L+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
+ ++ + G L G +N+ + + +L + + +A+ YL +
Sbjct: 76 GI-IEEEPTWIIMELYPYGEL-----GHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN 129
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ----PIAAQRM-ISYKSPEYQ 445
+H ++ NIL+ E V + D+G S + + R+ I + SPE
Sbjct: 130 -------CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESI 182
Query: 446 SSKKISRKSDVWSFGCLLLELLT 468
+ ++ + SDVW F + E+L+
Sbjct: 183 NFRRFTTASDVWMFAVCMWEILS 205
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 128/305 (41%), Gaps = 55/305 (18%)
Query: 276 LGKGIFGNSYKAL---LEGRA---PVVVKRLRD-LKPLITEEFRKQLLVIADQKHPNLLP 328
LG+G FG KA L+GRA V VK L++ P + + V+ HP+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 329 LLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKS------------------SKNRIPFRCR 370
L + LL+ ++A G+L + + +
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 371 SRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP 430
+ A +++ ++YL + ++H +L + NIL+ + + +SD+G S V +
Sbjct: 151 DLISFAWQISQGMQYL-------AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 431 IA----AQRMISYKSPEYQS--SKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGAD 484
+ +Q I K +S + +SDVWSFG LL E++T + + P GI
Sbjct: 204 DSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT--LGGNPYP-GIPPER 260
Query: 485 LCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
L + + R E + + M +L+ +QC + P+KRP A++ +L
Sbjct: 261 LFNLLKTGHRME-----------RPDNCSEEMYRLM---LQCWKQEPDKRPVFADISKDL 306
Query: 545 EIIKV 549
E + V
Sbjct: 307 EKMMV 311
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 24/157 (15%)
Query: 323 HPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARA 382
HPN++ L Y +N LV+ G LF+ + ++ + + R +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL------TEKVTLSEKETRKIMRALLEV 136
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI----S 438
+ LH + ++H +LK NILLDD+ + ++D+GFS + P R + S
Sbjct: 137 ICALH-------KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL-DPGEKLRSVCGTPS 188
Query: 439 YKSPEY------QSSKKISRKSDVWSFGCLLLELLTG 469
Y +PE + ++ D+WS G ++ LL G
Sbjct: 189 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 93/205 (45%), Gaps = 25/205 (12%)
Query: 276 LGKGIFGNSYKALL--EG---RAPVVVKRLRD-LKPLITEEFRKQLLVIADQKHPNLLPL 329
L G FG YK L EG + PV +K LR+ P +E + V+A +P++ L
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
L ++ +L+ + G L + + + K+ I + V +A+ + YL +
Sbjct: 83 LGICLTSTVQLIT-QLMPFGCLLDYV---REHKDNIGSQYLLNWCVQ--IAKGMNYLEDR 136
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA------QPIAAQRMISYKSPE 443
++H +L + N+L+ + V ++D+G + L+ + I + + E
Sbjct: 137 -------RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 444 YQSSKKISRKSDVWSFGCLLLELLT 468
+ + +SDVWS+G + EL+T
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 91/207 (43%), Gaps = 26/207 (12%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYF 334
LGKG +G Y L + + +K + + ++ +++ + KH N++ L +
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 335 SNDEKLLVYKFAGNGNLFNRIHGG----KSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
N + + G+L + K ++ I F + + L+YLH
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ-------ILEGLKYLH--- 139
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVL-VSDYGFSSLVA--QPIAAQ--RMISYKSPEY- 444
+ ++H ++K N+L++ VL +SD+G S +A P + Y +PE
Sbjct: 140 ----DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEII 195
Query: 445 -QSSKKISRKSDVWSFGCLLLELLTGR 470
+ + + +D+WS GC ++E+ TG+
Sbjct: 196 DKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 99/246 (40%), Gaps = 39/246 (15%)
Query: 264 KLNDLLKAPAEGLGKGIFGNSYKA--LLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQ 321
K D+ K +E LG+G + A L G+ V + + FR+ + Q
Sbjct: 9 KFEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQ 68
Query: 322 KHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVAR 381
+ N+L L+ ++ + LV++ G++ I K R R V R VA
Sbjct: 69 GNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASR------VVRDVAA 122
Query: 382 ALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMV---LVSDYGFSSLV-----AQPIAA 433
AL++LH K + H +LK NIL + E V + D+ S + PI
Sbjct: 123 ALDFLHTK-------GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITT 175
Query: 434 QRMIS------YKSPEY-----QSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGING 482
+ + Y +PE + ++ D+WS G +L +L+G + G G
Sbjct: 176 PELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG----YPPFVGHCG 231
Query: 483 ADLCSW 488
AD C W
Sbjct: 232 AD-CGW 236
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 273 AEGLGKGIFGNSY--KALLEGRAPVVV----KRLRDLKPLITEEFRKQLLVIADQKHPNL 326
+ LG G FG K L G V +++R L + + R+++ + +HP++
Sbjct: 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLD--VVGKIRREIQNLKLFRHPHI 78
Query: 327 LPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYL 386
+ L + + +V ++ G LF+ I R+ + RL + + ++Y
Sbjct: 79 IKLYQVISTPSDIFMVMEYVSGGELFDYI----CKNGRLDEKESRRLF--QQILSGVDYC 132
Query: 387 HHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYKSPEYQS 446
H + V+H +LK N+LLD + ++D+G S++++ S SP Y +
Sbjct: 133 H-------RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD--GEFLRXSCGSPNYAA 183
Query: 447 SKKISRK------SDVWSFGCLLLELLTGRI 471
+ IS + D+WS G +L LL G +
Sbjct: 184 PEVISGRLYAGPEVDIWSSGVILYALLCGTL 214
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 93/205 (45%), Gaps = 25/205 (12%)
Query: 276 LGKGIFGNSYKALL--EG---RAPVVVKRLRD-LKPLITEEFRKQLLVIADQKHPNLLPL 329
LG G FG YK L EG + PV + LR+ P +E + V+A +P++ L
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
L ++ +L+ + G L + + + K+ I + V +A+ + YL +
Sbjct: 117 LGICLTSTVQLIT-QLMPFGCLLDYV---REHKDNIGSQYLLNWCVQ--IAKGMNYLEDR 170
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA------QPIAAQRMISYKSPE 443
++H +L + N+L+ + V ++D+G + L+ + I + + E
Sbjct: 171 -------RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 223
Query: 444 YQSSKKISRKSDVWSFGCLLLELLT 468
+ + +SDVWS+G + EL+T
Sbjct: 224 SILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 90/203 (44%), Gaps = 23/203 (11%)
Query: 276 LGKGIFGNSYKALLEG----RAPVVVKRLR-DLKPLITEEFRKQLLVIADQKHPNLLPLL 330
LG+G FG Y+ + + V VK + D E+F + +++ + HP+++ L+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
+ ++ + G L G +N+ + + +L + + +A+ YL +
Sbjct: 80 GI-IEEEPTWIIMELYPYGEL-----GHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN 133
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ----PIAAQRM-ISYKSPEYQ 445
+H ++ NIL+ E V + D+G S + + R+ I + SPE
Sbjct: 134 -------CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESI 186
Query: 446 SSKKISRKSDVWSFGCLLLELLT 468
+ ++ + SDVW F + E+L+
Sbjct: 187 NFRRFTTASDVWMFAVCMWEILS 209
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 93/209 (44%), Gaps = 24/209 (11%)
Query: 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLI--TEEFRKQLLVIADQKHPNLLPLL 330
+ LG+G +G A+ V ++ D+K + E +K++ + A H N++
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFY 71
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
+ + + L ++ G LF+RI R +L+ GV YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV----YLH--- 122
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-------YKSPE 443
+ H ++K N+LLD+ + + +SD+G ++ V + +R+++ Y +PE
Sbjct: 123 ----GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPE 177
Query: 444 YQSSKKI-SRKSDVWSFGCLLLELLTGRI 471
++ + DVWS G +L +L G +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 67/167 (40%), Gaps = 27/167 (16%)
Query: 322 KHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVAR 381
+HPN++ L Y +V + G L ++I K F R V + +
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKF------FSEREASAVLFTITK 127
Query: 382 ALEYLHHKDKSRTQSAVIHGNLKSTNILLDDN----EMVLVSDYGFS-------SLVAQP 430
+EYLH + V+H +LK +NIL D E + + D+GF+ L+ P
Sbjct: 128 TVEYLHAQ-------GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTP 180
Query: 431 IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAP 477
++ PE + D+WS G LL LTG + P
Sbjct: 181 CYTANFVA---PEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGP 224
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 91/207 (43%), Gaps = 26/207 (12%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYF 334
LGKG +G Y L + + +K + + ++ +++ + KH N++ L +
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 335 SNDEKLLVYKFAGNGNLFNRIHGG----KSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
N + + G+L + K ++ I F + + L+YLH
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ-------ILEGLKYLH--- 125
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVL-VSDYGFSSLVA--QPIAAQ--RMISYKSPEY- 444
+ ++H ++K N+L++ VL +SD+G S +A P + Y +PE
Sbjct: 126 ----DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEII 181
Query: 445 -QSSKKISRKSDVWSFGCLLLELLTGR 470
+ + + +D+WS GC ++E+ TG+
Sbjct: 182 DKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 90/203 (44%), Gaps = 23/203 (11%)
Query: 276 LGKGIFGNSYKALLEG----RAPVVVKRLR-DLKPLITEEFRKQLLVIADQKHPNLLPLL 330
LG+G FG Y+ + + V VK + D E+F + +++ + HP+++ L+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
+ ++ + G L G +N+ + + +L + + +A+ YL +
Sbjct: 92 GI-IEEEPTWIIMELYPYGEL-----GHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN 145
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ----PIAAQRM-ISYKSPEYQ 445
+H ++ NIL+ E V + D+G S + + R+ I + SPE
Sbjct: 146 -------CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESI 198
Query: 446 SSKKISRKSDVWSFGCLLLELLT 468
+ ++ + SDVW F + E+L+
Sbjct: 199 NFRRFTTASDVWMFAVCMWEILS 221
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/282 (19%), Positives = 118/282 (41%), Gaps = 40/282 (14%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRLRDLKPL----ITEEFRKQLLVIADQKHPNLLPLL 330
+G+G FG+ ++ + + P + ++ K + E+F ++ L + HP+++ L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
+ + ++ + G L + + K S + S +L A ++ AL YL K
Sbjct: 458 GV-ITENPVWIIMELCTLGELRSFLQVRKFSLD-----LASLILYAYQLSTALAYLESK- 510
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS-----SLVAQPIAAQRMISYKSPEYQ 445
+H ++ + N+L+ + V + D+G S S + + I + +PE
Sbjct: 511 ------RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 564
Query: 446 SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSE 505
+ ++ + SDVW FG + E+L + QG+ D+ + R
Sbjct: 565 NFRRFTSASDVWMFGVCMWEILMHGVKPF---QGVKNNDVIGRIENGER----------- 610
Query: 506 ISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
+ + + + L+ +C P +RP E+ ++L I
Sbjct: 611 LPMPPNCPPTLYSLM---TKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 115/270 (42%), Gaps = 33/270 (12%)
Query: 282 GNSYKALLEGRAPVV-VKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSND--E 338
G +K +G VV V ++RD + +F ++ + HPN+LP+L S
Sbjct: 24 GELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH 83
Query: 339 KLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAV 398
L+ + G+L+N +H G + + L +ARG+A +LH + +
Sbjct: 84 PTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMA----FLH-----TLEPLI 134
Query: 399 IHGNLKSTNILLDDNEMVLVS--DYGFSSLVAQPIAAQRMISYKSPEYQSSKKISRKSDV 456
L S ++++D++ +S D FS + A ++ ++ + + R +D+
Sbjct: 135 PRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADM 194
Query: 457 WSFGCLLLELLTGRISTHSAPQGINGADLCSW-VLRAVREEWTAEIFDSEISVQRSAAHG 515
WSF LL EL+T + ADL + + V E IS S
Sbjct: 195 WSFAVLLWELVTREVPF---------ADLSNMEIGMKVALEGLRPTIPPGISPHVS---- 241
Query: 516 MLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
KL+++ C N+ P KRP+ +V LE
Sbjct: 242 --KLMKI---CMNEDPAKRPKFDMIVPILE 266
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 44/215 (20%)
Query: 276 LGKGIFGN---SYKALLEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLL 330
+G G +G+ +Y A L R V VK+L R + LI ++L ++ KH N++ LL
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 331 AYY--------FSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARA 382
+ FS E LV G +L N + S + F L R
Sbjct: 94 DVFTPATSIEDFS--EVYLVTTLMG-ADLNNIVKCQALSDEHVQFLVYQLL-------RG 143
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYKSP 442
L+Y+H + +IH +LK +N+ ++++ + + D+G + A + M Y +
Sbjct: 144 LKYIH-------SAGIIHRDLKPSNVAVNEDSELRILDFGLARQ-----ADEEMTGYVAT 191
Query: 443 EYQSSKKI-------SRKSDVWSFGCLLLELLTGR 470
+ + +I ++ D+WS GC++ ELL G+
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/282 (19%), Positives = 118/282 (41%), Gaps = 40/282 (14%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRLRDLKPL----ITEEFRKQLLVIADQKHPNLLPLL 330
+G+G FG+ ++ + + P + ++ K + E+F ++ L + HP+++ L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
+ + ++ + G L + + K S + S +L A ++ AL YL K
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFLQVRKFSLD-----LASLILYAYQLSTALAYLESK- 130
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS-----SLVAQPIAAQRMISYKSPEYQ 445
+H ++ + N+L+ + V + D+G S S + + I + +PE
Sbjct: 131 ------RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 184
Query: 446 SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSE 505
+ ++ + SDVW FG + E+L + QG+ D+ + R
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMHGVKPF---QGVKNNDVIGRIENGER----------- 230
Query: 506 ISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547
+ + + + L+ +C P +RP E+ ++L I
Sbjct: 231 LPMPPNCPPTLYSLM---TKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 74/156 (47%), Gaps = 23/156 (14%)
Query: 323 HPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARA 382
HP ++ + +F ++ +V + G LF+++ G K K C+ L + A
Sbjct: 74 HPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEAT---CK---LYFYQMLLA 126
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDDNE---MVLVSDYGFSSLVAQPIAAQRMI-- 437
++YLH ++ +IH +LK N+LL E ++ ++D+G S ++ + + +
Sbjct: 127 VQYLH-------ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 179
Query: 438 -SYKSPEYQSSKKIS---RKSDVWSFGCLLLELLTG 469
+Y +PE S + R D WS G +L L+G
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 72/156 (46%), Gaps = 21/156 (13%)
Query: 322 KHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVAR 381
+HP+++ L + + +V ++ G LF+ I R+ RL + +
Sbjct: 69 RHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI----CKHGRVEEMEARRLF--QQILS 122
Query: 382 ALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYKS 441
A++Y H + V+H +LK N+LLD + ++D+G S++++ S S
Sbjct: 123 AVDYCH-------RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD--GEFLRTSCGS 173
Query: 442 PEYQSSKKISRK------SDVWSFGCLLLELLTGRI 471
P Y + + IS + D+WS G +L LL G +
Sbjct: 174 PNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTL 209
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 83/178 (46%), Gaps = 25/178 (14%)
Query: 301 RDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKS 360
R+ P + E ++ ++ HP ++ + +F ++ +V + G LF+++ G K
Sbjct: 193 READPALNVE--TEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKR 249
Query: 361 SKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNE---MVL 417
K C+ L + A++YLH ++ +IH +LK N+LL E ++
Sbjct: 250 LKEAT---CK---LYFYQMLLAVQYLH-------ENGIIHRDLKPENVLLSSQEEDCLIK 296
Query: 418 VSDYGFSSLVAQPIAAQRMI---SYKSPEYQSSKKIS---RKSDVWSFGCLLLELLTG 469
++D+G S ++ + + + +Y +PE S + R D WS G +L L+G
Sbjct: 297 ITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 83/178 (46%), Gaps = 25/178 (14%)
Query: 301 RDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKS 360
R+ P + E ++ ++ HP ++ + +F ++ +V + G LF+++ G K
Sbjct: 179 READPALNVE--TEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKR 235
Query: 361 SKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNE---MVL 417
K C+ L + A++YLH ++ +IH +LK N+LL E ++
Sbjct: 236 LKEAT---CK---LYFYQMLLAVQYLH-------ENGIIHRDLKPENVLLSSQEEDCLIK 282
Query: 418 VSDYGFSSLVAQPIAAQRMI---SYKSPEYQSSKKIS---RKSDVWSFGCLLLELLTG 469
++D+G S ++ + + + +Y +PE S + R D WS G +L L+G
Sbjct: 283 ITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 74/156 (47%), Gaps = 23/156 (14%)
Query: 323 HPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARA 382
HP ++ + +F ++ +V + G LF+++ G K K C+ L + A
Sbjct: 73 HPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEAT---CK---LYFYQMLLA 125
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDDNE---MVLVSDYGFSSLVAQPIAAQRMI-- 437
++YLH ++ +IH +LK N+LL E ++ ++D+G S ++ + + +
Sbjct: 126 VQYLH-------ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 178
Query: 438 -SYKSPEYQSSKKIS---RKSDVWSFGCLLLELLTG 469
+Y +PE S + R D WS G +L L+G
Sbjct: 179 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 74/156 (47%), Gaps = 23/156 (14%)
Query: 323 HPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARA 382
HP ++ + +F ++ +V + G LF+++ G K K C+ L + A
Sbjct: 74 HPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEAT---CK---LYFYQMLLA 126
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDDNE---MVLVSDYGFSSLVAQPIAAQRMI-- 437
++YLH ++ +IH +LK N+LL E ++ ++D+G S ++ + + +
Sbjct: 127 VQYLH-------ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 179
Query: 438 -SYKSPEYQSSKKIS---RKSDVWSFGCLLLELLTG 469
+Y +PE S + R D WS G +L L+G
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 74/156 (47%), Gaps = 23/156 (14%)
Query: 323 HPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARA 382
HP ++ + +F ++ +V + G LF+++ G K K C+ L + A
Sbjct: 74 HPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEAT---CK---LYFYQMLLA 126
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDDNE---MVLVSDYGFSSLVAQPIAAQRMI-- 437
++YLH ++ +IH +LK N+LL E ++ ++D+G S ++ + + +
Sbjct: 127 VQYLH-------ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 179
Query: 438 -SYKSPEYQSSKKIS---RKSDVWSFGCLLLELLTG 469
+Y +PE S + R D WS G +L L+G
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 104/230 (45%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L + + +I + ++L ++ KH N++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 152
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+G + + Y++PE
Sbjct: 153 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 205
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 251
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 81/203 (39%), Gaps = 23/203 (11%)
Query: 276 LGKGIFGNSYKA---LLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAY 332
LGKG FG K + + V V K T +++ ++ HPN++ L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 333 YFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKS 392
+ +V + G LF+ I R F + + V + Y+H +
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEII------KRKRFSEHDAARIIKQVFSGITYMHKHN-- 141
Query: 393 RTQSAVIHGNLKSTNILLDDNEM---VLVSDYGFSSLVAQPIAAQRMIS---YKSPEYQS 446
++H +LK NILL+ E + + D+G S+ Q + I Y +PE
Sbjct: 142 -----IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLR 196
Query: 447 SKKISRKSDVWSFGCLLLELLTG 469
K DVWS G +L LL+G
Sbjct: 197 GT-YDEKCDVWSAGVILYILLSG 218
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 103/230 (44%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 140
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D G + + Y++PE
Sbjct: 141 IHSAD-------IIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATRWYRAPEI 193
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 239
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 103/230 (44%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 140
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D G + + Y++PE
Sbjct: 141 IHSAD-------IIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATRWYRAPEI 193
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 239
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 74/156 (47%), Gaps = 23/156 (14%)
Query: 323 HPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARA 382
HP ++ + +F ++ +V + G LF+++ G K K C+ L + A
Sbjct: 80 HPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEAT---CK---LYFYQMLLA 132
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDDNE---MVLVSDYGFSSLVAQPIAAQRMI-- 437
++YLH ++ +IH +LK N+LL E ++ ++D+G S ++ + + +
Sbjct: 133 VQYLH-------ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 185
Query: 438 -SYKSPEYQSSKKIS---RKSDVWSFGCLLLELLTG 469
+Y +PE S + R D WS G +L L+G
Sbjct: 186 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 91/206 (44%), Gaps = 32/206 (15%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYF 334
LG G FG YKA E A K + E++ ++ ++A HP ++ LL Y+
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 335 SNDEKLLVYKFAGNGN---LFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
+ + ++ +F G + + G ++ +I CR L AL +LH K
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRG-LTEPQIQVVCRQML-------EALNFLHSK-- 128
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYKSPEYQSSKKI- 450
+IH +LK+ N+L+ + ++D+G S+ + + Q+ S+ Y + ++
Sbjct: 129 -----RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL--QKRDSFIGTPYWMAPEVV 181
Query: 451 ----------SRKSDVWSFGCLLLEL 466
K+D+WS G L+E+
Sbjct: 182 MCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 38/216 (17%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP-------- 430
+ R L+Y+H + V+H +LK +N+LL+ + + D+G + VA P
Sbjct: 135 ILRGLKYIH-------SANVLHRDLKPSNLLLNTTSDLKICDFGLAR-VADPDHDHTGFL 186
Query: 431 --IAAQRMISYKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR---ISTHSAPQ-----G 479
A R Y++PE +SK ++ D+WS GC+L E+L+ R H Q G
Sbjct: 187 TEYVATRW--YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 244
Query: 480 INGA----DL-CSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKR 534
I G+ DL C L+A R + +++ R + K L + + +P KR
Sbjct: 245 ILGSPSQEDLNCGINLKA-RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 303
Query: 535 PEMAEVVSELEIIKVTESTEE---EEDFWLDQSLTD 567
E+ + ++ + + + ++E E F D L D
Sbjct: 304 IEVEQALAHPYLAQYYDPSDEPIAEAPFKFDMELDD 339
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 33/173 (19%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV---AQPIAAQR 435
+ + ++Y+H K +I+ +LK +NI L D + V + D+G + + + ++
Sbjct: 131 ITKGVDYIHSK-------KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKG 183
Query: 436 MISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVRE 495
+ Y SPE SS+ ++ D+++ G +L ELL H S +R+
Sbjct: 184 TLRYMSPEQISSQDYGKEVDLYALGLILAELL------HVCDTAFE----TSKFFTDLRD 233
Query: 496 EWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548
++IFD + LLQ + +K PE RP +E++ L + K
Sbjct: 234 GIISDIFDKKEKT----------LLQ---KLLSKKPEDRPNTSEILRTLTVWK 273
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 273 AEGLGKGIFGNSYKAL--LEGRAPVVVKRLR---DLKPLITEEFRKQLLVIADQKHPNLL 327
E +G+G +G YKA L G V +K++R + + + + R ++ ++ + HPN++
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIV 64
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
LL + ++ LV++ + S+ IP L + + L + H
Sbjct: 65 KLLDVIHTENKLYLVFEHVHQDL---KTFMDASALTGIPLPLIKSYLFQ--LLQGLAFCH 119
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE 443
V+H +LK N+L++ + ++D+G + P+ + Y++PE
Sbjct: 120 -------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 172
Query: 444 -YQSSKKISRKSDVWSFGCLLLELLTGR 470
K S D+WS GC+ E++T R
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 97/209 (46%), Gaps = 32/209 (15%)
Query: 276 LGKGIFGN---SYKALLEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLL 330
+G G +G+ SY ++ + VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 59 VGSGAYGSVCSSYD--VKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 116
Query: 331 AYYFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARAL 383
+ ND L+ + + N N + K + + + F + + R L
Sbjct: 117 DVFTPATSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGL 167
Query: 384 EYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSP 442
+Y+H D +IH +LK +N+ ++++ + + D+G + + Y++P
Sbjct: 168 KYIHSAD-------IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 220
Query: 443 EYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
E + + D+WS GC++ ELLTGR
Sbjct: 221 EIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 66 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 118
Query: 342 VYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
V ++ G +F+ + G+ S+ F A + EYLH D +I+
Sbjct: 119 VMEYVAGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLHSLD-------LIY 164
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSF 459
+LK N+L+D + V+D+GF+ V + Y +PE SK ++ D W+
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 460 GCLLLELLTG 469
G L+ E+ G
Sbjct: 225 GVLIYEMAAG 234
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 21/170 (12%)
Query: 307 ITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRI-HGGKSSKNRI 365
I E +++++ +HPN++ + +V ++A G LF RI + G+ S++
Sbjct: 57 IDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEA 116
Query: 366 PFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM--VLVSDYGF 423
F + + + Y H V H +LK N LLD + + + D+G+
Sbjct: 117 RF-------FFQQLISGVSYCH-------AMQVCHRDLKLENTLLDGSPAPRLKICDFGY 162
Query: 424 SS---LVAQPIAAQRMISYKSPEYQSSKKISRK-SDVWSFGCLLLELLTG 469
S L +QP + +Y +PE K+ K +DVWS G L +L G
Sbjct: 163 SKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 21/156 (13%)
Query: 322 KHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVAR 381
+HP+++ L + + +V ++ G LF+ I R+ RL + +
Sbjct: 69 RHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI----CKHGRVEEMEARRLF--QQILS 122
Query: 382 ALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYKS 441
A++Y H + V+H +LK N+LLD + ++D+G S++++ + S S
Sbjct: 123 AVDYCH-------RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRD--SCGS 173
Query: 442 PEYQSSKKISRK------SDVWSFGCLLLELLTGRI 471
P Y + + IS + D+WS G +L LL G +
Sbjct: 174 PNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTL 209
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 66 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 118
Query: 342 VYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
V ++ G +F+ + G+ S+ F A + EYLH D +I+
Sbjct: 119 VMEYVAGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLHSLD-------LIY 164
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSF 459
+LK N+L+D + V+D+GF+ V + Y +PE SK ++ D W+
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 460 GCLLLELLTG 469
G L+ E+ G
Sbjct: 225 GVLIYEMAAG 234
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 93/203 (45%), Gaps = 25/203 (12%)
Query: 274 EGLGKGIFGNSYKAL-LEGRAPVVVKRLR--DLKPLITEEFRKQLLVIADQKHPNLLPLL 330
E +G+G +G +KA E V +KR+R D + +++ ++ + KH N++ L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 331 AYYFSNDEKLLVYKFAGNG--NLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
S+ + LV++F F+ +G P +S L + + L + H
Sbjct: 68 DVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLD-----PEIVKSFLF---QLLKGLGFCHS 119
Query: 389 KDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI----AAQRMISYKSPEY 444
++ V+H +LK N+L++ N + ++D+G + P+ A + Y+ P+
Sbjct: 120 RN-------VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDV 172
Query: 445 QSSKKISRKS-DVWSFGCLLLEL 466
K+ S D+WS GC+ EL
Sbjct: 173 LFGAKLYSTSIDMWSAGCIFAEL 195
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 81/203 (39%), Gaps = 23/203 (11%)
Query: 276 LGKGIFGNSYKA---LLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAY 332
LGKG FG K + + V V K T +++ ++ HPN++ L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 333 YFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKS 392
+ +V + G LF+ I R F + + V + Y+H +
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEI------IKRKRFSEHDAARIIKQVFSGITYMHKHN-- 141
Query: 393 RTQSAVIHGNLKSTNILLDDNEM---VLVSDYGFSSLVAQPIAAQRMIS---YKSPEYQS 446
++H +LK NILL+ E + + D+G S+ Q + I Y +PE
Sbjct: 142 -----IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLR 196
Query: 447 SKKISRKSDVWSFGCLLLELLTG 469
K DVWS G +L LL+G
Sbjct: 197 GT-YDEKCDVWSAGVILYILLSG 218
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP-------- 430
+ R L+Y+H + V+H +LK +N+LL+ + + D+G + VA P
Sbjct: 133 ILRGLKYIH-------SANVLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFL 184
Query: 431 --IAAQRMISYKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
A R Y++PE +SK ++ D+WS GC+L E+L+ R
Sbjct: 185 TEYVATRW--YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP-------- 430
+ R L+Y+H + V+H +LK +N+LL+ + + D+G + VA P
Sbjct: 137 ILRGLKYIH-------SANVLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFL 188
Query: 431 --IAAQRMISYKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
A R Y++PE +SK ++ D+WS GC+L E+L+ R
Sbjct: 189 TEYVATRW--YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 26/206 (12%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEE------FRKQLLVIADQKHPNLLPL 329
LGKG FG A +G + ++ +I ++ K++L + D K P L L
Sbjct: 27 LGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLD-KPPFLTQL 85
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
+ + + D V ++ G+L I GK F+ + A ++ L +LH
Sbjct: 86 HSCFQTVDRLYFVMEYVNGGDLMYHIQQVGK-------FKEPQAVFYAAEISIGLFFLHK 138
Query: 389 KDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI----SYKSPEY 444
+ +I+ +LK N++LD + ++D+G R Y +PE
Sbjct: 139 R-------GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEI 191
Query: 445 QSSKKISRKSDVWSFGCLLLELLTGR 470
+ + + D W++G LL E+L G+
Sbjct: 192 IAYQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 93/224 (41%), Gaps = 38/224 (16%)
Query: 276 LGKGIFGNSYKALLEGRAP------VVVKRLRDLKPLITEEFRKQLLVIADQ--KHPNLL 327
LG G FG A G + V VK L++ E L + Q H N++
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIV 112
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGG--KSSKNRIPFRCRSRL------------ 373
LL + L++++ G+L N + K S++ I + + RL
Sbjct: 113 NLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFE 172
Query: 374 ---LVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP 430
A VA+ +E+L K + +H +L + N+L+ ++V + D+G + +
Sbjct: 173 DLLCFAYQVAKGMEFLEFK-------SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSD 225
Query: 431 IA------AQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
A+ + + +PE + KSDVWS+G LL E+ +
Sbjct: 226 SNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 81/203 (39%), Gaps = 23/203 (11%)
Query: 276 LGKGIFGNSYKA---LLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAY 332
LGKG FG K + + V V K T +++ ++ HPN++ L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 333 YFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKS 392
+ +V + G LF+ I R F + + V + Y+H +
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEI------IKRKRFSEHDAARIIKQVFSGITYMHKHN-- 141
Query: 393 RTQSAVIHGNLKSTNILLDDNEM---VLVSDYGFSSLVAQPIAAQRMIS---YKSPEYQS 446
++H +LK NILL+ E + + D+G S+ Q + I Y +PE
Sbjct: 142 -----IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLR 196
Query: 447 SKKISRKSDVWSFGCLLLELLTG 469
K DVWS G +L LL+G
Sbjct: 197 GT-YDEKCDVWSAGVILYILLSG 218
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 28/224 (12%)
Query: 255 IEDEQPAGFKLNDLLKAPAEGLGKGIFGNSYKALLEGRAPV-VVKRLRDLKPLITEEFRK 313
+E +Q + + D+L E LG G FG ++ + + V V K + PL +
Sbjct: 42 VEVKQGSVYDYYDIL----EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKN 97
Query: 314 QLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGG--KSSKNRIPFRCRS 371
++ ++ HP L+ L + E +L+ +F G LF+RI K S+ +
Sbjct: 98 EISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEV------ 151
Query: 372 RLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM--VLVSDYGFSSLVAQ 429
+ R L+++H + +++H ++K NI+ + + V + D+G ++ +
Sbjct: 152 -INYMRQACEGLKHMH-------EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKL-N 202
Query: 430 PIAAQRMIS----YKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
P ++ + + +PE + + +D+W+ G L LL+G
Sbjct: 203 PDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 246
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP-------- 430
+ R L+Y+H + V+H +LK +N+LL+ + + D+G + VA P
Sbjct: 137 ILRGLKYIH-------SANVLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFL 188
Query: 431 --IAAQRMISYKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
A R Y++PE +SK ++ D+WS GC+L E+L+ R
Sbjct: 189 TEYVATRW--YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP-------- 430
+ R L+Y+H + V+H +LK +N+LL+ + + D+G + VA P
Sbjct: 133 ILRGLKYIH-------SANVLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFL 184
Query: 431 --IAAQRMISYKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
A R Y++PE +SK ++ D+WS GC+L E+L+ R
Sbjct: 185 TEYVATRW--YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP-------- 430
+ R L+Y+H + V+H +LK +N+LL+ + + D+G + VA P
Sbjct: 133 ILRGLKYIH-------SANVLHRDLKPSNLLLNTTXDLKIXDFGLAR-VADPDHDHTGFL 184
Query: 431 --IAAQRMISYKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
A R Y++PE +SK ++ D+WS GC+L E+L+ R
Sbjct: 185 TEYVATRW--YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 77/176 (43%), Gaps = 33/176 (18%)
Query: 375 VARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQ 434
+A + +ALE+LH K +VIH ++K +N+L++ V + D+G S + +A
Sbjct: 158 IAVSIVKALEHLHSK------LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVA-- 209
Query: 435 RMISYKSPEYQSSKKI---------SRKSDVWSFGCLLLELLTGRISTHSAPQGINGADL 485
+ I Y + ++I S KSD+WS G ++EL R S
Sbjct: 210 KTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQ--- 266
Query: 486 CSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVV 541
L+ V EE + ++ + S + + QC K+ ++RP E++
Sbjct: 267 ----LKQVVEEPSPQLPADKFSAE---------FVDFTSQCLKKNSKERPTYPELM 309
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 103/230 (44%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 140
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D G + + Y++PE
Sbjct: 141 IHSAD-------IIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATRWYRAPEI 193
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 239
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 23/190 (12%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 53 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 105
Query: 342 VYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
V ++ G +F+ + G+ S+ F A + EYLH D +I+
Sbjct: 106 VMEYVAGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLHSLD-------LIY 151
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSF 459
+LK N+L+D+ + V+D+GF+ V + Y +PE SK ++ D W+
Sbjct: 152 RDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 211
Query: 460 GCLLLELLTG 469
G L+ E+ G
Sbjct: 212 GVLIYEMAAG 221
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP-------- 430
+ R L+Y+H + V+H +LK +N+LL+ + + D+G + VA P
Sbjct: 153 ILRGLKYIH-------SANVLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFL 204
Query: 431 --IAAQRMISYKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
A R Y++PE +SK ++ D+WS GC+L E+L+ R
Sbjct: 205 TEYVATRW--YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 91/206 (44%), Gaps = 32/206 (15%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYF 334
LG G FG YKA E A K + E++ ++ ++A HP ++ LL Y+
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 335 SNDEKLLVYKFAGNGN---LFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
+ + ++ +F G + + G ++ +I CR L AL +LH K
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRG-LTEPQIQVVCRQML-------EALNFLHSK-- 136
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYKSPEYQSSKKI- 450
+IH +LK+ N+L+ + ++D+G S+ + + Q+ S+ Y + ++
Sbjct: 137 -----RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL--QKRDSFIGTPYWMAPEVV 189
Query: 451 ----------SRKSDVWSFGCLLLEL 466
K+D+WS G L+E+
Sbjct: 190 MCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 98/210 (46%), Gaps = 27/210 (12%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFR-----KQLLVIADQKHPNLLP 328
E LG G + YK L + V L+++K L +EE +++ ++ + KH N++
Sbjct: 11 EKLGNGTYATVYKGL--NKTTGVYVALKEVK-LDSEEGTPSTAIREISLMKELKHENIVR 67
Query: 329 LLAYYFSNDEKLLVYKFAGNG---NLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
L + ++ LV++F N + +R G + + + +G+A
Sbjct: 68 LYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFC--- 124
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI----AAQRMISYKS 441
H++K ++H +LK N+L++ + + D+G + P+ + + Y++
Sbjct: 125 --HENK------ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRA 176
Query: 442 PE-YQSSKKISRKSDVWSFGCLLLELLTGR 470
P+ S+ S D+WS GC+L E++TG+
Sbjct: 177 PDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 24/209 (11%)
Query: 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLI--TEEFRKQLLVIADQKHPNLLPLL 330
+ LG+G +G A+ V ++ D+K + E +K++ + H N++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
+ + + L ++ G LF+RI R +L+ GV YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV----YLH--- 121
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-------YKSPE 443
+ H ++K N+LLD+ + + +SD+G ++ V + +R+++ Y +PE
Sbjct: 122 ----GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPE 176
Query: 444 YQSSKKI-SRKSDVWSFGCLLLELLTGRI 471
++ + DVWS G +L +L G +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 91/213 (42%), Gaps = 39/213 (18%)
Query: 276 LGKGIFGNSYK-------------ALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQK 322
LGKG +G ++ A+ + ++V+ +D T + + ++ + K
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKD-----TAHTKAERNILEEVK 79
Query: 323 HPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARA 382
HP ++ L+ + + + L+ ++ G LF ++ + I + +A ++ A
Sbjct: 80 HPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL-----EREGIFMEDTACFYLAE-ISMA 133
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGF------SSLVAQPIAAQRM 436
L +LH Q +I+ +LK NI+L+ V ++D+G V
Sbjct: 134 LGHLH-------QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCG--T 184
Query: 437 ISYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
I Y +PE +R D WS G L+ ++LTG
Sbjct: 185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 98/209 (46%), Gaps = 33/209 (15%)
Query: 276 LGKGIFGNSYKALLEGRA--PVVVKRLRDLKPLITEEFRK----QLLVIADQKHPNLLPL 329
+G G +G+ A+ + R+ V +K+L +P +E F K +LL++ +H N++ L
Sbjct: 32 VGSGAYGSVCSAI-DKRSGEKVAIKKLS--RPFQSEIFAKRAYRELLLLKHMQHENVIGL 88
Query: 330 LAYYFSND------EKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARAL 383
L + + LV F +I G K S+ +I + L + L
Sbjct: 89 LDVFTPASSLRNFYDFYLVMPFMQTD--LQKIMGLKFSEEKIQYLVYQML-------KGL 139
Query: 384 EYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSP 442
+Y+H + V+H +LK N+ ++++ + + D+G + + + Y++P
Sbjct: 140 KYIH-------SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAP 192
Query: 443 EY-QSSKKISRKSDVWSFGCLLLELLTGR 470
E S ++ D+WS GC++ E+LTG+
Sbjct: 193 EVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 17/152 (11%)
Query: 323 HPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARA 382
HP L+ L + + + V ++ G+L + + ++P +R A ++ A
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ----RQRKLP-EEHARFYSAE-ISLA 165
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI----S 438
L YLH + +I+ +LK N+LLD + ++DYG +P +
Sbjct: 166 LNYLHER-------GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPN 218
Query: 439 YKSPEYQSSKKISRKSDVWSFGCLLLELLTGR 470
Y +PE + D W+ G L+ E++ GR
Sbjct: 219 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 250
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 91/213 (42%), Gaps = 39/213 (18%)
Query: 276 LGKGIFGNSYK-------------ALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQK 322
LGKG +G ++ A+ + ++V+ +D T + + ++ + K
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKD-----TAHTKAERNILEEVK 79
Query: 323 HPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARA 382
HP ++ L+ + + + L+ ++ G LF ++ + I + +A ++ A
Sbjct: 80 HPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL-----EREGIFMEDTACFYLAE-ISMA 133
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGF------SSLVAQPIAAQRM 436
L +LH Q +I+ +LK NI+L+ V ++D+G V
Sbjct: 134 LGHLH-------QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCG--T 184
Query: 437 ISYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
I Y +PE +R D WS G L+ ++LTG
Sbjct: 185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 95/209 (45%), Gaps = 26/209 (12%)
Query: 271 APAEGLGKGIFGNSYKALLEG---RAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLL 327
+ E LG G FG +K + + + R +K EE + ++ V+ H NL+
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKD--KEEVKNEISVMNQLDHANLI 149
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
L + S ++ +LV ++ G LF+RI + + +L + + + ++H
Sbjct: 150 QLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTEL-----DTILFMKQICEGIRHMH 204
Query: 388 HKDKSRTQSAVIHGNLKSTNILL--DDNEMVLVSDYGFSSLVAQPIAAQRMISYKSPEYQ 445
Q ++H +LK NIL D + + + D+G + +P + +++ +PE+
Sbjct: 205 -------QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRY-KPREKLK-VNFGTPEFL 255
Query: 446 SSKK-----ISRKSDVWSFGCLLLELLTG 469
+ + +S +D+WS G + LL+G
Sbjct: 256 APEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 24/209 (11%)
Query: 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLI--TEEFRKQLLVIADQKHPNLLPLL 330
+ LG+G +G A+ V ++ D+K + E +K++ + H N++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
+ + + L ++ G LF+RI R +L+ GV YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV----YLH--- 121
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-------YKSPE 443
+ H ++K N+LLD+ + + +SD+G ++ V + +R+++ Y +PE
Sbjct: 122 ----GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPE 176
Query: 444 YQSSKKI-SRKSDVWSFGCLLLELLTGRI 471
++ + DVWS G +L +L G +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 40/213 (18%)
Query: 276 LGKGIFGN---SYKALLEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLL 330
+G G +G+ +Y A L R V VK+L R + LI ++L ++ KH N++ LL
Sbjct: 28 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 331 AYYFSN------DEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALE 384
+ E LV G +L N + S + F L R L+
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMG-ADLNNIVKCQALSDEHVQFLVYQLL-------RGLK 137
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYKSPEY 444
Y+H + +IH +LK +N+ ++++ + + D+G + A + M Y + +
Sbjct: 138 YIH-------SAGIIHRDLKPSNVAVNEDCELRILDFGLARQ-----ADEEMTGYVATRW 185
Query: 445 QSSKKI-------SRKSDVWSFGCLLLELLTGR 470
+ +I ++ D+WS GC++ ELL G+
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 24/209 (11%)
Query: 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLI--TEEFRKQLLVIADQKHPNLLPLL 330
+ LG+G +G A+ V ++ D+K + E +K++ + H N++
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
+ + + L ++ G LF+RI R +L+ GV YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV----YLH--- 122
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-------YKSPE 443
+ H ++K N+LLD+ + + +SD+G ++ V + +R+++ Y +PE
Sbjct: 123 ----GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPE 177
Query: 444 YQSSKKI-SRKSDVWSFGCLLLELLTGRI 471
++ + DVWS G +L +L G +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E+ +Q + P L+ L + N +
Sbjct: 67 GNHYAMKILDKQKVV--KLKQIEHTLNEKRIQQAV-----NFPFLVKLEFSFKDNSNLYM 119
Query: 342 VYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
V ++A G +F+ + G+ S+ F A + EYLH D +I+
Sbjct: 120 VLEYAPGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLHSLD-------LIY 165
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSF 459
+LK N+L+D + V+D+GF+ V + Y +PE SK ++ D W+
Sbjct: 166 RDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 460 GCLLLELLTG 469
G L+ E+ G
Sbjct: 226 GVLIYEMAAG 235
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 24/209 (11%)
Query: 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLI--TEEFRKQLLVIADQKHPNLLPLL 330
+ LG+G +G A+ V ++ D+K + E +K++ + H N++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
+ + + L ++ G LF+RI R +L+ GV YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV----YLH--- 121
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-------YKSPE 443
+ H ++K N+LLD+ + + +SD+G ++ V + +R+++ Y +PE
Sbjct: 122 ----GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMXGTLPYVAPE 176
Query: 444 YQSSKKI-SRKSDVWSFGCLLLELLTGRI 471
++ + DVWS G +L +L G +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 89/215 (41%), Gaps = 37/215 (17%)
Query: 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEE---FRKQLLVIADQKHPNLLPL 329
E +GKG FG Y G + RL D++ ++ F+++++ +H N++
Sbjct: 38 GELIGKGRFGQVYHGRWHGEVAI---RLIDIERDNEDQLKAFKREVMAYRQTRHENVVLF 94
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK 389
+ S ++ L++ + K I +A+ + + + YLH K
Sbjct: 95 MGACMSPPHLAIITSLCKGRTLYSVVRDAK-----IVLDVNKTRQIAQEIVKGMGYLHAK 149
Query: 390 DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR-------------- 435
++H +LKS N+ DN V+++D+G S+ A +R
Sbjct: 150 -------GILHKDLKSKNVFY-DNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHL 201
Query: 436 ---MISYKSPEYQSSK-KISRKSDVWSFGCLLLEL 466
+I SP+ + K S+ SDV++ G + EL
Sbjct: 202 APEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 17/152 (11%)
Query: 323 HPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARA 382
HP L+ L + + + V ++ G+L + + ++P +R A ++ A
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ----RQRKLP-EEHARFYSAE-ISLA 133
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI----S 438
L YLH + +I+ +LK N+LLD + ++DYG +P +
Sbjct: 134 LNYLHER-------GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPN 186
Query: 439 YKSPEYQSSKKISRKSDVWSFGCLLLELLTGR 470
Y +PE + D W+ G L+ E++ GR
Sbjct: 187 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 218
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 97/208 (46%), Gaps = 24/208 (11%)
Query: 273 AEGLGKGIFGNSYKAL--LEGRAPVVVKRLR---DLKPLITEEFRKQLLVIADQKHPNLL 327
E +G+G +G YKA L G V +K++R + + + + R ++ ++ + HPN++
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIV 68
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
LL + ++ LV++ + +L + + +P +S L + + L + H
Sbjct: 69 KLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPL-IKSYLF---QLLQGLAFCH 123
Query: 388 HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----MISYKSPE 443
V+H +LK N+L++ + ++D+G + P+ + Y++PE
Sbjct: 124 -------SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 176
Query: 444 -YQSSKKISRKSDVWSFGCLLLELLTGR 470
K S D+WS GC+ E++T R
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 17/152 (11%)
Query: 323 HPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARA 382
HP L+ L + + + V ++ G+L + + ++P +R A ++ A
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ----RQRKLP-EEHARFYSAE-ISLA 122
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI----S 438
L YLH + +I+ +LK N+LLD + ++DYG +P +
Sbjct: 123 LNYLHER-------GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPN 175
Query: 439 YKSPEYQSSKKISRKSDVWSFGCLLLELLTGR 470
Y +PE + D W+ G L+ E++ GR
Sbjct: 176 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 207
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 102/237 (43%), Gaps = 61/237 (25%)
Query: 273 AEGLGKGIFGNSYKALLEGRAPVV-VKRLRDLKPLITE---EFRKQLLVIADQKHPNLLP 328
+ LGKG +G +K++ VV VK++ D T+ FR+ +++ H N++
Sbjct: 14 VKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVN 73
Query: 329 LLAYYFSNDEK--LLVYKFAGN-------GNLFNRIHGGKSSKNRIPFRCRSRLLVARGV 379
LL +++++ LV+ + N+ +H + V +
Sbjct: 74 LLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVH---------------KQYVVYQL 118
Query: 380 ARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS-SLV----------- 427
+ ++YLH ++H ++K +NILL+ V V+D+G S S V
Sbjct: 119 IKVIKYLH-------SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPL 171
Query: 428 -----------AQPIAAQRMIS--YKSPE-YQSSKKISRKSDVWSFGCLLLELLTGR 470
QPI + + Y++PE S K ++ D+WS GC+L E+L G+
Sbjct: 172 SINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 37/197 (18%)
Query: 311 FRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCR 370
FR+ ++ Q H N+L L+ ++ D LV++ G++ + IH R F
Sbjct: 58 FREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIH------KRRHFNEL 111
Query: 371 SRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDD-NEM--VLVSDYGFSSLV 427
+V + VA AL++LH+K + H +LK NIL + N++ V + D+G S +
Sbjct: 112 EASVVVQDVASALDFLHNK-------GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGI 164
Query: 428 -----AQPIAAQRMIS------YKSPEY-----QSSKKISRKSDVWSFGCLLLELLTGRI 471
PI+ +++ Y +PE + + ++ D+WS G +L LL+G
Sbjct: 165 KLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG-- 222
Query: 472 STHSAPQGINGADLCSW 488
+ G G+D C W
Sbjct: 223 --YPPFVGRCGSD-CGW 236
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 24/209 (11%)
Query: 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLI--TEEFRKQLLVIADQKHPNLLPLL 330
+ LG+G +G A+ V ++ D+K + E +K++ + H N++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
+ + + L ++ G LF+RI R +L+ GV YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV----YLH--- 121
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-------YKSPE 443
+ H ++K N+LLD+ + + +SD+G ++ V + +R+++ Y +PE
Sbjct: 122 ----GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPE 176
Query: 444 YQSSKKI-SRKSDVWSFGCLLLELLTGRI 471
++ + DVWS G +L +L G +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 103/230 (44%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 140
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + +G + + Y++PE
Sbjct: 141 IHSAD-------IIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 239
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 24/209 (11%)
Query: 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLI--TEEFRKQLLVIADQKHPNLLPLL 330
+ LG+G +G A+ V ++ D+K + E +K++ + H N++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
+ + + L ++ G LF+RI R +L+ GV YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV----YLH--- 121
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-------YKSPE 443
+ H ++K N+LLD+ + + +SD+G ++ V + +R+++ Y +PE
Sbjct: 122 ----GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPE 176
Query: 444 YQSSKKI-SRKSDVWSFGCLLLELLTGRI 471
++ + DVWS G +L +L G +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 17/152 (11%)
Query: 323 HPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARA 382
HP L+ L + + + V ++ G+L + + ++P +R A ++ A
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ----RQRKLP-EEHARFYSAE-ISLA 118
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI----S 438
L YLH + +I+ +LK N+LLD + ++DYG +P +
Sbjct: 119 LNYLHER-------GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPN 171
Query: 439 YKSPEYQSSKKISRKSDVWSFGCLLLELLTGR 470
Y +PE + D W+ G L+ E++ GR
Sbjct: 172 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 203
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 24/209 (11%)
Query: 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLI--TEEFRKQLLVIADQKHPNLLPLL 330
+ LG+G +G A+ V ++ D+K + E +K++ + H N++
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
+ + + L ++ G LF+RI R +L+ GV YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV----YLH--- 122
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-------YKSPE 443
+ H ++K N+LLD+ + + +SD+G ++ V + +R+++ Y +PE
Sbjct: 123 ----GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPE 177
Query: 444 YQSSKKI-SRKSDVWSFGCLLLELLTGRI 471
++ + DVWS G +L +L G +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 24/209 (11%)
Query: 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLI--TEEFRKQLLVIADQKHPNLLPLL 330
+ LG+G +G A+ V ++ D+K + E +K++ + H N++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
+ + + L ++ G LF+RI R +L+ GV YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV----YLH--- 121
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-------YKSPE 443
+ H ++K N+LLD+ + + +SD+G ++ V + +R+++ Y +PE
Sbjct: 122 ----GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPE 176
Query: 444 YQSSKKI-SRKSDVWSFGCLLLELLTGRI 471
++ + DVWS G +L +L G +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 66 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 118
Query: 342 VYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
V ++ G +F+ + G+ S+ F A + EYLH D +I+
Sbjct: 119 VMEYVAGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLHSLD-------LIY 164
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSF 459
+LK N+L+D + V+D+GF+ V + Y +PE SK ++ D W+
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 460 GCLLLELLTG 469
G L+ E+ G
Sbjct: 225 GVLIYEMAAG 234
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 36/210 (17%)
Query: 276 LGKGIFGNSY--KALLEGRAPVV-------VKRLRDLKPLITE-EFRKQLLVIADQKHPN 325
LGKG FG K + G+ V VK+ D + L+ E + KQL HPN
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL------DHPN 87
Query: 326 LLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
++ L ++ LV + G LF+ I S+ R +R++ R V + Y
Sbjct: 88 IMKLYEFFEDKGYFYLVGEVYTGGELFDEI----ISRKRFSEVDAARII--RQVLSGITY 141
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEM---VLVSDYGFSSLVAQPIAAQRMIS---Y 439
+H ++ ++H +LK N+LL+ + + D+G S+ + I Y
Sbjct: 142 MH-------KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYY 194
Query: 440 KSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
+PE K DVWS G +L LL+G
Sbjct: 195 IAPEVLHG-TYDEKCDVWSTGVILYILLSG 223
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 24/209 (11%)
Query: 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLI--TEEFRKQLLVIADQKHPNLLPLL 330
+ LG+G +G A+ V ++ D+K + E +K++ + H N++
Sbjct: 10 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 69
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
+ + + L ++ G LF+RI R +L+ GV YLH
Sbjct: 70 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV----YLH--- 120
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-------YKSPE 443
+ H ++K N+LLD+ + + +SD+G ++ V + +R+++ Y +PE
Sbjct: 121 ----GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPE 175
Query: 444 YQSSKKI-SRKSDVWSFGCLLLELLTGRI 471
++ + DVWS G +L +L G +
Sbjct: 176 LLKRREFHAEPVDVWSCGIVLTAMLAGEL 204
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 66 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 118
Query: 342 VYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
V ++ G +F+ + G+ S+ F A + EYLH D +I+
Sbjct: 119 VMEYVAGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLHSLD-------LIY 164
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSF 459
+LK N+L+D + V+D+GF+ V + Y +PE SK ++ D W+
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 460 GCLLLELLTG 469
G L+ E+ G
Sbjct: 225 GVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 66 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 118
Query: 342 VYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
V ++ G +F+ + G+ S+ F A + EYLH D +I+
Sbjct: 119 VMEYVAGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLHSLD-------LIY 164
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSF 459
+LK N+L+D + V+D+GF+ V + Y +PE SK ++ D W+
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 460 GCLLLELLTG 469
G L+ E+ G
Sbjct: 225 GVLIYEMAAG 234
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 24/209 (11%)
Query: 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLI--TEEFRKQLLVIADQKHPNLLPLL 330
+ LG+G +G A+ V ++ D+K + E +K++ + H N++
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
+ + + L ++ G LF+RI R +L+ GV YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV----YLH--- 122
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-------YKSPE 443
+ H ++K N+LLD+ + + +SD+G ++ V + +R+++ Y +PE
Sbjct: 123 ----GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPE 177
Query: 444 YQSSKKI-SRKSDVWSFGCLLLELLTGRI 471
++ + DVWS G +L +L G +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 24/209 (11%)
Query: 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLI--TEEFRKQLLVIADQKHPNLLPLL 330
+ LG+G +G A+ V ++ D+K + E +K++ + H N++
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
+ + + L ++ G LF+RI R +L+ GV YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV----YLH--- 122
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-------YKSPE 443
+ H ++K N+LLD+ + + +SD+G ++ V + +R+++ Y +PE
Sbjct: 123 ----GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPE 177
Query: 444 YQSSKKI-SRKSDVWSFGCLLLELLTGRI 471
++ + DVWS G +L +L G +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 24/209 (11%)
Query: 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLI--TEEFRKQLLVIADQKHPNLLPLL 330
+ LG+G +G A+ V ++ D+K + E +K++ + H N++
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
+ + + L ++ G LF+RI R +L+ GV YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV----YLH--- 122
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-------YKSPE 443
+ H ++K N+LLD+ + + +SD+G ++ V + +R+++ Y +PE
Sbjct: 123 ----GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPE 177
Query: 444 YQSSKKI-SRKSDVWSFGCLLLELLTGRI 471
++ + DVWS G +L +L G +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 66 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 118
Query: 342 VYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
V ++ G +F+ + G+ S+ F A + EYLH D +I+
Sbjct: 119 VMEYVAGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLHSLD-------LIY 164
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSF 459
+LK N+L+D + V+D+GF+ V + Y +PE SK ++ D W+
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 460 GCLLLELLTG 469
G L+ E+ G
Sbjct: 225 GVLIYEMAAG 234
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 23/190 (12%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 66 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 118
Query: 342 VYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
V ++A G +F+ + G+ S+ F A + EYLH D +I+
Sbjct: 119 VMEYAPGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLHSLD-------LIY 164
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSF 459
+LK N+++D + V+D+GF+ V + Y +PE SK ++ D W+
Sbjct: 165 RDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 460 GCLLLELLTG 469
G L+ E+ G
Sbjct: 225 GVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 66 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 118
Query: 342 VYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
V ++ G +F+ + G+ S+ F A + EYLH D +I+
Sbjct: 119 VMEYVAGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLHSLD-------LIY 164
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSF 459
+LK N+L+D + V+D+GF+ V + Y +PE SK ++ D W+
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 460 GCLLLELLTG 469
G L+ E+ G
Sbjct: 225 GVLIYEMAAG 234
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP-------- 430
+ R L+Y+H + V+H +LK +N+LL+ + + D+G + VA P
Sbjct: 137 ILRGLKYIH-------SANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFL 188
Query: 431 --IAAQRMISYKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
A R Y++PE +SK ++ D+WS GC+L E+L+ R
Sbjct: 189 TEYVATRW--YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 24/209 (11%)
Query: 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLI--TEEFRKQLLVIADQKHPNLLPLL 330
+ LG+G +G A+ V ++ D+K + E +K++ + H N++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
+ + + L ++ G LF+RI R +L+ GV YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV----YLH--- 121
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-------YKSPE 443
+ H ++K N+LLD+ + + +SD+G ++ V + +R+++ Y +PE
Sbjct: 122 ----GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMXGTLPYVAPE 176
Query: 444 YQSSKKI-SRKSDVWSFGCLLLELLTGRI 471
++ + DVWS G +L +L G +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP-------- 430
+ R L+Y+H + V+H +LK +N+LL+ + + D+G + VA P
Sbjct: 131 ILRGLKYIH-------SANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFL 182
Query: 431 --IAAQRMISYKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
A R Y++PE +SK ++ D+WS GC+L E+L+ R
Sbjct: 183 TEYVATRW--YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP-------- 430
+ R L+Y+H + V+H +LK +N+LL+ + + D+G + VA P
Sbjct: 138 ILRGLKYIH-------SANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFL 189
Query: 431 --IAAQRMISYKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
A R Y++PE +SK ++ D+WS GC+L E+L+ R
Sbjct: 190 TEYVATRW--YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP-------- 430
+ R L+Y+H + V+H +LK +N+LL+ + + D+G + VA P
Sbjct: 139 ILRGLKYIH-------SANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFL 190
Query: 431 --IAAQRMISYKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
A R Y++PE +SK ++ D+WS GC+L E+L+ R
Sbjct: 191 TEYVATRW--YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP-------- 430
+ R L+Y+H + V+H +LK +N+LL+ + + D+G + VA P
Sbjct: 130 ILRGLKYIH-------SANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFL 181
Query: 431 --IAAQRMISYKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
A R Y++PE +SK ++ D+WS GC+L E+L+ R
Sbjct: 182 TEYVATRW--YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP-------- 430
+ R L+Y+H + V+H +LK +N+LL+ + + D+G + VA P
Sbjct: 137 ILRGLKYIH-------SANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFL 188
Query: 431 --IAAQRMISYKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
A R Y++PE +SK ++ D+WS GC+L E+L+ R
Sbjct: 189 TEYVATRW--YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP-------- 430
+ R L+Y+H + V+H +LK +N+LL+ + + D+G + VA P
Sbjct: 131 ILRGLKYIH-------SANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFL 182
Query: 431 --IAAQRMISYKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
A R Y++PE +SK ++ D+WS GC+L E+L+ R
Sbjct: 183 TEYVATRW--YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 29/174 (16%)
Query: 375 VARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQ 434
+A + +ALE+LH K +VIH ++K +N+L++ V + D+G S + +A
Sbjct: 114 IAVSIVKALEHLHSK------LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKD 167
Query: 435 ---RMISYKSPEY----QSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCS 487
Y +PE + K S KSD+WS G ++EL R S
Sbjct: 168 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQ----- 222
Query: 488 WVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVV 541
L+ V EE + ++ + S + + QC K+ ++RP E++
Sbjct: 223 --LKQVVEEPSPQLPADKFSAE---------FVDFTSQCLKKNSKERPTYPELM 265
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 66 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 118
Query: 342 VYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
V ++ G +F+ + G+ S+ F A + EYLH D +I+
Sbjct: 119 VMEYVAGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLHSLD-------LIY 164
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSF 459
+LK N+L+D + V+D+GF+ V + Y +PE SK ++ D W+
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 460 GCLLLELLTG 469
G L+ E+ G
Sbjct: 225 GVLIYEMAAG 234
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 98/209 (46%), Gaps = 33/209 (15%)
Query: 276 LGKGIFGNSYKALLEGRA--PVVVKRLRDLKPLITEEFRK----QLLVIADQKHPNLLPL 329
+G G +G+ A+ + R+ V +K+L +P +E F K +LL++ +H N++ L
Sbjct: 50 VGSGAYGSVCSAI-DKRSGEKVAIKKLS--RPFQSEIFAKRAYRELLLLKHMQHENVIGL 106
Query: 330 LAYYFSND------EKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARAL 383
L + + LV F +I G + S+ +I + L + L
Sbjct: 107 LDVFTPASSLRNFYDFYLVMPFMQTD--LQKIMGMEFSEEKIQYLVYQML-------KGL 157
Query: 384 EYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSP 442
+Y+H + V+H +LK N+ ++++ + + D+G + + + Y++P
Sbjct: 158 KYIH-------SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAP 210
Query: 443 EY-QSSKKISRKSDVWSFGCLLLELLTGR 470
E S ++ D+WS GC++ E+LTG+
Sbjct: 211 EVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 67 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 119
Query: 342 VYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
V ++ G +F+ + G+ S+ F A + EYLH D +I+
Sbjct: 120 VMEYVAGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLHSLD-------LIY 165
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSF 459
+LK N+L+D + V+D+GF+ V + Y +PE SK ++ D W+
Sbjct: 166 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 460 GCLLLELLTG 469
G L+ E+ G
Sbjct: 226 GVLIYEMAAG 235
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP-------- 430
+ R L+Y+H + V+H +LK +N+LL+ + + D+G + VA P
Sbjct: 137 ILRGLKYIH-------SANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFL 188
Query: 431 --IAAQRMISYKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
A R Y++PE +SK ++ D+WS GC+L E+L+ R
Sbjct: 189 TEYVATRW--YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 24/209 (11%)
Query: 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLI--TEEFRKQLLVIADQKHPNLLPLL 330
+ LG+G +G A+ V ++ D+K + E +K++ + H N++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
+ + + L ++ G LF+RI R +L+ GV YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV----YLH--- 121
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-------YKSPE 443
+ H ++K N+LLD+ + + +SD+G ++ V + +R+++ Y +PE
Sbjct: 122 ----GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPE 176
Query: 444 YQSSKKI-SRKSDVWSFGCLLLELLTGRI 471
++ + DVWS G +L +L G +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 36/210 (17%)
Query: 276 LGKGIFGNSY--KALLEGRAPVV-------VKRLRDLKPLITE-EFRKQLLVIADQKHPN 325
LGKG FG K + G+ V VK+ D + L+ E + KQL HPN
Sbjct: 57 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL------DHPN 110
Query: 326 LLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
++ L ++ LV + G LF+ I S+ R +R++ R V + Y
Sbjct: 111 IMKLYEFFEDKGYFYLVGEVYTGGELFDEI----ISRKRFSEVDAARII--RQVLSGITY 164
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEM---VLVSDYGFSSLVAQPIAAQRMIS---Y 439
+H ++ ++H +LK N+LL+ + + D+G S+ + I Y
Sbjct: 165 MH-------KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYY 217
Query: 440 KSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
+PE K DVWS G +L LL+G
Sbjct: 218 IAPEVLHG-TYDEKCDVWSTGVILYILLSG 246
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP-------- 430
+ R L+Y+H + V+H +LK +N+LL+ + + D+G + VA P
Sbjct: 135 ILRGLKYIH-------SANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFL 186
Query: 431 --IAAQRMISYKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
A R Y++PE +SK ++ D+WS GC+L E+L+ R
Sbjct: 187 TEYVATRW--YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 91/210 (43%), Gaps = 36/210 (17%)
Query: 276 LGKGIFGNSY--KALLEGRAPVV-------VKRLRDLKPLITE-EFRKQLLVIADQKHPN 325
LGKG FG K + G+ V VK+ D + L+ E + KQL HPN
Sbjct: 58 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL------DHPN 111
Query: 326 LLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
++ L ++ LV + G LF+ I S+ R +R++ R V + Y
Sbjct: 112 IMKLYEFFEDKGYFYLVGEVYTGGELFDEI----ISRKRFSEVDAARII--RQVLSGITY 165
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDD---NEMVLVSDYGFSSLVAQPIAAQRMIS---Y 439
+H ++ ++H +LK N+LL+ + + + D+G S+ + I Y
Sbjct: 166 MH-------KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYY 218
Query: 440 KSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
+PE K DVWS G +L LL+G
Sbjct: 219 IAPEVLHG-TYDEKCDVWSTGVILYILLSG 247
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 24/209 (11%)
Query: 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLI--TEEFRKQLLVIADQKHPNLLPLL 330
+ LG+G +G A+ V ++ D+K + E +K++ + H N++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
+ + + L ++ G LF+RI R +L+ GV YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV----YLH--- 121
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-------YKSPE 443
+ H ++K N+LLD+ + + +SD+G ++ V + +R+++ Y +PE
Sbjct: 122 ----GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMXGTLPYVAPE 176
Query: 444 YQSSKKI-SRKSDVWSFGCLLLELLTGRI 471
++ + DVWS G +L +L G +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 91/206 (44%), Gaps = 24/206 (11%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLI--TEEFRKQLLVIADQKHPNLLPLLAYY 333
LG+G +G A+ V ++ D+K + E +K++ + H N++ +
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 334 FSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSR 393
+ + L ++ G LF+RI R +L+ GV YLH
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV----YLH------ 122
Query: 394 TQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-------YKSPEYQS 446
+ H ++K N+LLD+ + + +SD+G ++ V + +R+++ Y +PE
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 447 SKKI-SRKSDVWSFGCLLLELLTGRI 471
++ + DVWS G +L +L G +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 91/206 (44%), Gaps = 24/206 (11%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLI--TEEFRKQLLVIADQKHPNLLPLLAYY 333
LG+G +G A+ V ++ D+K + E +K++ + H N++ +
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 334 FSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSR 393
+ + L ++ G LF+RI R +L+ GV YLH
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV----YLH------ 121
Query: 394 TQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-------YKSPEYQS 446
+ H ++K N+LLD+ + + +SD+G ++ V + +R+++ Y +PE
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 447 SKKI-SRKSDVWSFGCLLLELLTGRI 471
++ + DVWS G +L +L G +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP-------- 430
+ R L+Y+H + V+H +LK +N+LL+ + + D+G + VA P
Sbjct: 133 ILRGLKYIH-------SANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFL 184
Query: 431 --IAAQRMISYKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
A R Y++PE +SK ++ D+WS GC+L E+L+ R
Sbjct: 185 TEYVATRW--YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 24/209 (11%)
Query: 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLI--TEEFRKQLLVIADQKHPNLLPLL 330
+ LG+G +G A+ V ++ D+K + E +K++ + H N++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
+ + + L ++ G LF+RI R +L+ GV YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV----YLH--- 121
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-------YKSPE 443
+ H ++K N+LLD+ + + +SD+G ++ V + +R+++ Y +PE
Sbjct: 122 ----GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMXGTLPYVAPE 176
Query: 444 YQSSKKI-SRKSDVWSFGCLLLELLTGRI 471
++ + DVWS G +L +L G +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP-------- 430
+ R L+Y+H + V+H +LK +N+LL+ + + D+G + VA P
Sbjct: 137 ILRGLKYIH-------SANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFL 188
Query: 431 --IAAQRMISYKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
A R Y++PE +SK ++ D+WS GC+L E+L+ R
Sbjct: 189 XEXVATRW--YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP-------- 430
+ R L+Y+H + V+H +LK +N+LL+ + + D+G + VA P
Sbjct: 135 ILRGLKYIH-------SANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFL 186
Query: 431 --IAAQRMISYKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
A R Y++PE +SK ++ D+WS GC+L E+L+ R
Sbjct: 187 TEYVATRW--YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP-------- 430
+ R L+Y+H + V+H +LK +N+LL+ + + D+G + VA P
Sbjct: 138 ILRGLKYIH-------SANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFL 189
Query: 431 --IAAQRMISYKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
A R Y++PE +SK ++ D+WS GC+L E+L+ R
Sbjct: 190 XEXVATRW--YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 23/190 (12%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 66 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 118
Query: 342 VYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
V ++A G +F+ + G+ S+ F A + EYLH D +I+
Sbjct: 119 VMEYAPGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLHSLD-------LIY 164
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSF 459
+LK N+++D + V+D+GF+ V + Y +PE SK ++ D W+
Sbjct: 165 RDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 460 GCLLLELLTG 469
G L+ E+ G
Sbjct: 225 GVLIYEMAAG 234
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 103/230 (44%), Gaps = 32/230 (13%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRL-RDLKPLI-TEEFRKQLLVIADQKHPNLLPLLAY 332
+G G +G+ A + V VK+L R + +I + ++L ++ KH N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 333 YFS-------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ ND L+ + + N N + K + + + F + + R L+Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLN--NIVKCQKLTDDHVQF-------LIYQILRGLKY 140
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-YKSPEY 444
+H D +IH +LK +N+ ++++ + + D+ + + Y++PE
Sbjct: 141 IHSAD-------IIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATRWYRAPEI 193
Query: 445 Q-SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ ++ D+WS GC++ ELLTGR + G + D +LR V
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR----TLFPGTDHIDQLKLILRLV 239
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP-------- 430
+ R L+Y+H + V+H +LK +N+LL+ + + D+G + VA P
Sbjct: 153 ILRGLKYIH-------SANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFL 204
Query: 431 --IAAQRMISYKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
A R Y++PE +SK ++ D+WS GC+L E+L+ R
Sbjct: 205 TEYVATRW--YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP-------- 430
+ R L+Y+H + V+H +LK +N+LL+ + + D+G + VA P
Sbjct: 141 ILRGLKYIH-------SANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFL 192
Query: 431 --IAAQRMISYKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
A R Y++PE +SK ++ D+WS GC+L E+L+ R
Sbjct: 193 TEYVATRW--YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP-------- 430
+ R L+Y+H + V+H +LK +N+LL+ + + D+G + VA P
Sbjct: 133 ILRGLKYIH-------SANVLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFL 184
Query: 431 --IAAQRMISYKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
A R Y++PE +SK ++ D+WS GC+L E+L+ R
Sbjct: 185 TEYVATRW--YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 24/209 (11%)
Query: 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLI--TEEFRKQLLVIADQKHPNLLPLL 330
+ LG+G +G A+ V ++ D+K + E +K++ + H N++
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 71
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
+ + + L ++ G LF+RI R +L+ GV YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV----YLH--- 122
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-------YKSPE 443
+ H ++K N+LLD+ + + +SD+G ++ V + +R+++ Y +PE
Sbjct: 123 ----GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMXGTLPYVAPE 177
Query: 444 YQSSKKI-SRKSDVWSFGCLLLELLTGRI 471
++ + DVWS G +L +L G +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 23/190 (12%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 67 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 119
Query: 342 VYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
V ++A G +F+ + G+ S+ F A + EYLH D +I+
Sbjct: 120 VMEYAPGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLHSLD-------LIY 165
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSF 459
+LK N+++D + V+D+GF+ V + Y +PE SK ++ D W+
Sbjct: 166 RDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 460 GCLLLELLTG 469
G L+ E+ G
Sbjct: 226 GVLIYEMAAG 235
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 26/212 (12%)
Query: 275 GLGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEE----FRKQLLVIADQKHPNL 326
GLG G FG Y+ + G +P+ V ++ L + +E+ F + L+I+ H N+
Sbjct: 52 GLGHGAFGEVYEGQVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKLNHQNI 110
Query: 327 LPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLL-VARGVARALEY 385
+ + + + ++ + G+L + + + ++ LL VAR +A +Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILL---DDNEMVLVSDYGFS------SLVAQPIAAQRM 436
L ++ IH ++ + N LL + + D+G + S + A
Sbjct: 171 LE-------ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 223
Query: 437 ISYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
+ + PE + K+D WSFG LL E+ +
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 381 RALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS-SLVAQPIAAQRMIS- 438
R L+Y+H + VIH +LK +N+L+++N + + D+G + L P Q ++
Sbjct: 170 RGLKYMH-------SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTE 222
Query: 439 ------YKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
Y++PE S + ++ D+WS GC+ E+L R
Sbjct: 223 YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 261
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 381 RALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS-SLVAQPIAAQRMIS- 438
R L+Y+H + VIH +LK +N+L+++N + + D+G + L P Q ++
Sbjct: 169 RGLKYMH-------SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTE 221
Query: 439 ------YKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
Y++PE S + ++ D+WS GC+ E+L R
Sbjct: 222 YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 260
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 21/189 (11%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 66 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 118
Query: 342 VYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHG 401
V ++ G +F+ H + + P +R A+ + EYLH D +I+
Sbjct: 119 VMEYVAGGEMFS--HLRRIGRFXEP---HARFYAAQ-IVLTFEYLHSLD-------LIYR 165
Query: 402 NLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFG 460
+LK N+L+D + V+D+GF+ V + Y +PE SK ++ D W+ G
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 461 CLLLELLTG 469
L+ E+ G
Sbjct: 226 VLIYEMAAG 234
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 16/171 (9%)
Query: 306 LITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRI 365
L TE+ +++ + KHP+++ LL Y S+ +V++F +L I +
Sbjct: 68 LSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVY 127
Query: 366 PFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNE---MVLVSDYG 422
S + R + AL Y H + +IH ++K N+LL E V + D+G
Sbjct: 128 SEAVASHYM--RQILEALRYCHDNN-------IIHRDVKPENVLLASKENSAPVKLGDFG 178
Query: 423 FSSLVAQP--IAAQRMIS--YKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
+ + + +A R+ + + +PE + + DVW G +L LL+G
Sbjct: 179 VAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 83/190 (43%), Gaps = 23/190 (12%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 87 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 139
Query: 342 VYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
V ++ G +F+ + G+ S+ F A + EYLH D +I+
Sbjct: 140 VMEYVAGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLHSLD-------LIY 185
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQ-RMISYKSPEYQSSKKISRKSDVWSF 459
+LK N+L+D + V+D+GF+ V Y +PE SK ++ D W+
Sbjct: 186 RDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWAL 245
Query: 460 GCLLLELLTG 469
G L+ E+ G
Sbjct: 246 GVLIYEMAAG 255
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 26/212 (12%)
Query: 275 GLGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEE----FRKQLLVIADQKHPNL 326
GLG G FG Y+ + G +P+ V ++ L + +E+ F + L+I+ H N+
Sbjct: 38 GLGHGAFGEVYEGQVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKLNHQNI 96
Query: 327 LPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLL-VARGVARALEY 385
+ + + + ++ + G+L + + + ++ LL VAR +A +Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILL---DDNEMVLVSDYGFS------SLVAQPIAAQRM 436
L ++ IH ++ + N LL + + D+G + S + A
Sbjct: 157 LE-------ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 209
Query: 437 ISYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
+ + PE + K+D WSFG LL E+ +
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 26/212 (12%)
Query: 275 GLGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEE----FRKQLLVIADQKHPNL 326
GLG G FG Y+ + G +P+ V ++ L + +E+ F + L+I+ H N+
Sbjct: 52 GLGHGAFGEVYEGQVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKFNHQNI 110
Query: 327 LPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLL-VARGVARALEY 385
+ + + + ++ + G+L + + + ++ LL VAR +A +Y
Sbjct: 111 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILL---DDNEMVLVSDYGFS------SLVAQPIAAQRM 436
L ++ IH ++ + N LL + + D+G + S + A
Sbjct: 171 LE-------ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 223
Query: 437 ISYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
+ + PE + K+D WSFG LL E+ +
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 17/147 (11%)
Query: 326 LLPLLAYYFSNDEKL-LVYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARAL 383
L L Y F ++ L +V ++ G +F+ + G+ S+ F A +
Sbjct: 102 FLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTF 154
Query: 384 EYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSP 442
EYLH D +I+ +LK N+L+D + V+D+GF+ V + Y +P
Sbjct: 155 EYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 443 EYQSSKKISRKSDVWSFGCLLLELLTG 469
E SK ++ D W+ G L+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 21/189 (11%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 66 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 118
Query: 342 VYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHG 401
V ++ G +F+ H + + P +R A+ + EYLH D +I+
Sbjct: 119 VMEYVAGGEMFS--HLRRIGRFXEP---HARFYAAQ-IVLTFEYLHSLD-------LIYR 165
Query: 402 NLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFG 460
+LK N+L+D + V+D+GF+ V + Y +PE SK ++ D W+ G
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 461 CLLLELLTG 469
L+ E+ G
Sbjct: 226 VLIYEMAAG 234
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 66 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 118
Query: 342 VYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
V ++ G +F+ + G+ S+ F A + EYLH D +I+
Sbjct: 119 VMEYVAGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLHSLD-------LIY 164
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSF 459
+LK N+++D + V+D+GF+ V + Y +PE SK ++ D W+
Sbjct: 165 RDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWAL 224
Query: 460 GCLLLELLTG 469
G L+ E+ G
Sbjct: 225 GVLIYEMAAG 234
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 24/204 (11%)
Query: 276 LGKGIFGNSY--KALLEGR--APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
LGKG FG K + G+ A V+ + + + E +++ ++ HPN++ L
Sbjct: 40 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 99
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
++ LV + G LF+ I S+ R +R++ R V + Y+H
Sbjct: 100 FFEDKGYFYLVGEVYTGGELFDEI----ISRKRFSEVDAARII--RQVLSGITYMH---- 149
Query: 392 SRTQSAVIHGNLKSTNILLDDNEM---VLVSDYGFSSLVAQPIAAQRMIS---YKSPEYQ 445
++ ++H +LK N+LL+ + + D+G S+ + I Y +PE
Sbjct: 150 ---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL 206
Query: 446 SSKKISRKSDVWSFGCLLLELLTG 469
K DVWS G +L LL+G
Sbjct: 207 HG-TYDEKCDVWSTGVILYILLSG 229
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 112/288 (38%), Gaps = 41/288 (14%)
Query: 275 GLGKGIFGNSYKALLEGRA------PVVVKRLRDLKPLITE-EFRKQLLVIADQKHPNLL 327
GLG G FG Y+ + G V VK L ++ E +F + L+I+ H N++
Sbjct: 52 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIV 111
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLL-VARGVARALEYL 386
+ + + ++ + G+L + + + ++ LL VAR +A +YL
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 387 HHKDKSRTQSAVIHGNLKSTNILL---DDNEMVLVSDYGFS------SLVAQPIAAQRMI 437
++ IH ++ + N LL + + D+G + S + A +
Sbjct: 172 E-------ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 224
Query: 438 SYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEW 497
+ PE + K+D WSFG LL E+ + + P N ++ +V R +
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKSN-QEVLEFVTSGGRMD- 280
Query: 498 TAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
+ + ++ QC PE RP A ++ +E
Sbjct: 281 -------------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 26/212 (12%)
Query: 275 GLGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEE----FRKQLLVIADQKHPNL 326
GLG G FG Y+ + G +P+ V ++ L + +E+ F + L+I+ H N+
Sbjct: 38 GLGHGAFGEVYEGQVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKFNHQNI 96
Query: 327 LPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLL-VARGVARALEY 385
+ + + + ++ + G+L + + + ++ LL VAR +A +Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILL---DDNEMVLVSDYGFS------SLVAQPIAAQRM 436
L ++ IH ++ + N LL + + D+G + S + A
Sbjct: 157 LE-------ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLP 209
Query: 437 ISYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
+ + PE + K+D WSFG LL E+ +
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 14/136 (10%)
Query: 341 LVYKFAGNGNLF---NRIHGGK--SSKNRIP-FRCRSRLLVARGVARALEYLHHKDKSRT 394
L Y F N NL+ + GG+ S RI F A + EYLH D
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD---- 161
Query: 395 QSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRK 453
+I+ +LK N+L+D + V+D+GF+ V + Y +PE SK ++
Sbjct: 162 ---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 454 SDVWSFGCLLLELLTG 469
D W+ G L+ E+ G
Sbjct: 219 VDWWALGVLIYEMAAG 234
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 67 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 119
Query: 342 VYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
V ++ G +F+ + G+ S+ F A + EYLH D +I+
Sbjct: 120 VMEYVPGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLHSLD-------LIY 165
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSF 459
+LK N+L+D + V+D+GF+ V + Y +PE SK ++ D W+
Sbjct: 166 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 460 GCLLLELLTG 469
G L+ E+ G
Sbjct: 226 GVLIYEMAAG 235
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 93/211 (44%), Gaps = 32/211 (15%)
Query: 276 LGKGIFGNSYKALLEGRAPV----VVKRLRDLKPLITEEFRKQ--LLVIADQKHPNLLPL 329
+G+G FG L+ V ++ + LK T FR++ +LV D K +
Sbjct: 82 IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSK---WITT 138
Query: 330 LAYYFSNDEKL-LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
L Y F +D L LV + G+L + ++R+P +R +A V A++ +H
Sbjct: 139 LHYAFQDDNNLYLVMDYYVGGDLLTLL---SKFEDRLPEE-MARFYLAEMVI-AIDSVH- 192
Query: 389 KDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYKSPEYQSSK 448
Q +H ++K NIL+D N + ++D+G + + Q ++ +P+Y S +
Sbjct: 193 ------QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPE 246
Query: 449 ----------KISRKSDVWSFGCLLLELLTG 469
+ + D WS G + E+L G
Sbjct: 247 ILQAMEGGKGRYGPECDWWSLGVCMYEMLYG 277
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 17/147 (11%)
Query: 326 LLPLLAYYFSNDEKL-LVYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARAL 383
L L Y F ++ L +V ++ G +F+ + G+ S+ F A +
Sbjct: 102 FLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTF 154
Query: 384 EYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSP 442
EYLH D +I+ +LK N+L+D + V+D+GF+ V + Y +P
Sbjct: 155 EYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 443 EYQSSKKISRKSDVWSFGCLLLELLTG 469
E SK ++ D W+ G L+ E+ G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 26/212 (12%)
Query: 275 GLGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEE----FRKQLLVIADQKHPNL 326
GLG G FG Y+ + G +P+ V ++ L + +E+ F + L+I+ H N+
Sbjct: 37 GLGHGAFGEVYEGQVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKFNHQNI 95
Query: 327 LPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLL-VARGVARALEY 385
+ + + + ++ + G+L + + + ++ LL VAR +A +Y
Sbjct: 96 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILL---DDNEMVLVSDYGFS------SLVAQPIAAQRM 436
L ++ IH ++ + N LL + + D+G + S + A
Sbjct: 156 LE-------ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 208
Query: 437 ISYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
+ + PE + K+D WSFG LL E+ +
Sbjct: 209 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 66 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 118
Query: 342 VYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
V ++ G +F+ + G+ ++ F A + EYLH D +I+
Sbjct: 119 VMEYVAGGEMFSHLRRIGRFAEPHARF-------YAAQIVLTFEYLHSLD-------LIY 164
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSF 459
+LK N+L+D + V+D+GF+ V + Y +PE SK ++ D W+
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 460 GCLLLELLTG 469
G L+ E+ G
Sbjct: 225 GVLIYEMAAG 234
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 92/211 (43%), Gaps = 28/211 (13%)
Query: 272 PAEGLGKGIFGNSYKALLEGRAP-----VVVKRLR-----DLKPLITEEFRKQLLVIADQ 321
P +G G +G YKA R P V +K +R + P+ T L +
Sbjct: 8 PVAEIGVGAYGTVYKA----RDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 322 KHPNLLPLLAYYFSN--DEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGV 379
+HPN++ L+ ++ D ++ V + + R + K+ +P L+ R
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM--RQF 121
Query: 380 ARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS- 438
R L++LH + ++H +LK NIL+ V ++D+G + + + +A ++
Sbjct: 122 LRGLDFLH-------ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVT 174
Query: 439 --YKSPEYQSSKKISRKSDVWSFGCLLLELL 467
Y++PE + D+WS GC+ E+
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 52 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 104
Query: 342 VYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
V ++ G +F+ + G+ S+ F A + EYLH D +I+
Sbjct: 105 VMEYVPGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLHSLD-------LIY 150
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSF 459
+LK N+L+D + V+D+GF+ V + Y +PE SK ++ D W+
Sbjct: 151 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWAL 210
Query: 460 GCLLLELLTG 469
G L+ E+ G
Sbjct: 211 GVLIYEMAAG 220
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 26/212 (12%)
Query: 275 GLGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEE----FRKQLLVIADQKHPNL 326
GLG G FG Y+ + G +P+ V ++ L + +E+ F + L+I+ H N+
Sbjct: 37 GLGHGAFGEVYEGQVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKFNHQNI 95
Query: 327 LPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLL-VARGVARALEY 385
+ + + + ++ + G+L + + + ++ LL VAR +A +Y
Sbjct: 96 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILL---DDNEMVLVSDYGFS------SLVAQPIAAQRM 436
L ++ IH ++ + N LL + + D+G + S + A
Sbjct: 156 LE-------ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 208
Query: 437 ISYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
+ + PE + K+D WSFG LL E+ +
Sbjct: 209 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 21/189 (11%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 66 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 118
Query: 342 VYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHG 401
V ++ G +F+ H + + P +R A+ + EYLH D +I+
Sbjct: 119 VMEYVAGGEMFS--HLRRIGRFXEP---HARFYAAQ-IVLTFEYLHSLD-------LIYR 165
Query: 402 NLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFG 460
+LK N+L+D + V+D+GF+ V + Y +PE SK ++ D W+ G
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 461 CLLLELLTG 469
L+ E+ G
Sbjct: 226 VLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 21/189 (11%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 61 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 113
Query: 342 VYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHG 401
V ++ G +F+ H + + P +R A+ + EYLH D +I+
Sbjct: 114 VMEYVAGGEMFS--HLRRIGRFXEP---HARFYAAQ-IVLTFEYLHSLD-------LIYR 160
Query: 402 NLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFG 460
+LK N+L+D + V+D+GF+ V + Y +PE SK ++ D W+ G
Sbjct: 161 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 220
Query: 461 CLLLELLTG 469
L+ E+ G
Sbjct: 221 VLIYEMAAG 229
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 21/170 (12%)
Query: 307 ITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRI-HGGKSSKNRI 365
I +++++ +HPN++ + +V ++A G LF RI + G+ S++
Sbjct: 58 IAANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEA 117
Query: 366 PFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM--VLVSDYGF 423
F + + + Y H V H +LK N LLD + + + D+G+
Sbjct: 118 RF-------FFQQLISGVSYCH-------AMQVCHRDLKLENTLLDGSPAPRLKICDFGY 163
Query: 424 SS---LVAQPIAAQRMISYKSPEYQSSKKISRK-SDVWSFGCLLLELLTG 469
S L +QP + +Y +PE K+ K +DVWS G L +L G
Sbjct: 164 SKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 17/147 (11%)
Query: 326 LLPLLAYYFSNDEKL-LVYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARAL 383
L L + F ++ L +V ++A G +F+ + G+ S+ F A +
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTF 155
Query: 384 EYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSP 442
EYLH D +I+ +LK N+++D + V+D+GF+ V + Y +P
Sbjct: 156 EYLHSLD-------LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAP 208
Query: 443 EYQSSKKISRKSDVWSFGCLLLELLTG 469
E SK ++ D W+ G L+ E+ G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 86/189 (45%), Gaps = 21/189 (11%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 66 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 118
Query: 342 VYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHG 401
V ++A G +F+ H + + P +R A+ + EYLH D +I+
Sbjct: 119 VMEYAPGGEMFS--HLRRIGRFXEP---HARFYAAQ-IVLTFEYLHSLD-------LIYR 165
Query: 402 NLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFG 460
+LK N+++D + V+D+GF+ V + Y +PE SK ++ D W+ G
Sbjct: 166 DLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 461 CLLLELLTG 469
L+ E+ G
Sbjct: 226 VLIYEMAAG 234
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 26/212 (12%)
Query: 275 GLGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEE----FRKQLLVIADQKHPNL 326
GLG G FG Y+ + G +P+ V ++ L + +E+ F + L+I+ H N+
Sbjct: 38 GLGHGAFGEVYEGQVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKFNHQNI 96
Query: 327 LPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLL-VARGVARALEY 385
+ + + + ++ + G+L + + + ++ LL VAR +A +Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILL---DDNEMVLVSDYGFS------SLVAQPIAAQRM 436
L ++ IH ++ + N LL + + D+G + S + A
Sbjct: 157 LE-------ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 209
Query: 437 ISYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
+ + PE + K+D WSFG LL E+ +
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 26/212 (12%)
Query: 275 GLGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEE----FRKQLLVIADQKHPNL 326
GLG G FG Y+ + G +P+ V ++ L + +E+ F + L+I+ H N+
Sbjct: 29 GLGHGAFGEVYEGQVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKFNHQNI 87
Query: 327 LPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLL-VARGVARALEY 385
+ + + + ++ + G+L + + + ++ LL VAR +A +Y
Sbjct: 88 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 147
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILL---DDNEMVLVSDYGFS------SLVAQPIAAQRM 436
L ++ IH ++ + N LL + + D+G + S + A
Sbjct: 148 LE-------ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 200
Query: 437 ISYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
+ + PE + K+D WSFG LL E+ +
Sbjct: 201 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 17/147 (11%)
Query: 326 LLPLLAYYFSNDEKL-LVYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARAL 383
L L + F ++ L +V ++A G +F+ + G+ S+ F A +
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTF 155
Query: 384 EYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSP 442
EYLH D +I+ +LK N+++D + V+D+GF+ V + Y +P
Sbjct: 156 EYLHSLD-------LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAP 208
Query: 443 EYQSSKKISRKSDVWSFGCLLLELLTG 469
E SK ++ D W+ G L+ E+ G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 23/190 (12%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 66 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 118
Query: 342 VYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
V ++ G++F+ + G+ S+ F A + EYLH D +I+
Sbjct: 119 VMEYMPGGDMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLHSLD-------LIY 164
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSF 459
+LK N+L+D + V+D+GF+ V + Y +PE SK ++ D W+
Sbjct: 165 RDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 460 GCLLLELLTG 469
G L+ E+ G
Sbjct: 225 GVLIYEMAAG 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 59 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 111
Query: 342 VYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
V ++ G +F+ + G+ S+ F A + EYLH D +I+
Sbjct: 112 VMEYVPGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLHSLD-------LIY 157
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSF 459
+LK N+L+D + V+D+GF+ V + Y +PE SK ++ D W+
Sbjct: 158 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 217
Query: 460 GCLLLELLTG 469
G L+ E+ G
Sbjct: 218 GVLIYEMAAG 227
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 26/212 (12%)
Query: 275 GLGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEE----FRKQLLVIADQKHPNL 326
GLG G FG Y+ + G +P+ V ++ L + +E+ F + L+I+ H N+
Sbjct: 54 GLGHGAFGEVYEGQVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKFNHQNI 112
Query: 327 LPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLL-VARGVARALEY 385
+ + + + ++ + G+L + + + ++ LL VAR +A +Y
Sbjct: 113 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 172
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILL---DDNEMVLVSDYGFS------SLVAQPIAAQRM 436
L ++ IH ++ + N LL + + D+G + S + A
Sbjct: 173 LE-------ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 225
Query: 437 ISYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
+ + PE + K+D WSFG LL E+ +
Sbjct: 226 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 66 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 118
Query: 342 VYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
V ++ G +F+ + G+ S+ F A + EYLH D +I+
Sbjct: 119 VMEYVPGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLHSLD-------LIY 164
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSF 459
+LK N+L+D + V+D+GF+ V + Y +PE SK ++ D W+
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 460 GCLLLELLTG 469
G L+ E+ G
Sbjct: 225 GVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 23/190 (12%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 66 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 118
Query: 342 VYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
V ++ G++F+ + G+ S+ F A + EYLH D +I+
Sbjct: 119 VMEYMPGGDMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLHSLD-------LIY 164
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSF 459
+LK N+L+D + V+D+GF+ V + Y +PE SK ++ D W+
Sbjct: 165 RDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 460 GCLLLELLTG 469
G L+ E+ G
Sbjct: 225 GVLIYEMAAG 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 21/189 (11%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 87 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 139
Query: 342 VYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHG 401
V ++ G +F+ H + + P +R A+ + EYLH D +I+
Sbjct: 140 VMEYVAGGEMFS--HLRRIGRFXEP---HARFYAAQ-IVLTFEYLHSLD-------LIYR 186
Query: 402 NLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFG 460
+LK N+L+D + V+D+GF+ V + Y +PE SK ++ D W+ G
Sbjct: 187 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 246
Query: 461 CLLLELLTG 469
L+ E+ G
Sbjct: 247 VLIYEMAAG 255
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 66 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 118
Query: 342 VYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
V ++ G +F+ + G+ S+ F A + EYLH D +I+
Sbjct: 119 VMEYVPGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLHSLD-------LIY 164
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSF 459
+LK N+L+D + V+D+GF+ V + Y +PE SK ++ D W+
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 460 GCLLLELLTG 469
G L+ E+ G
Sbjct: 225 GVLIYEMAAG 234
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 92/211 (43%), Gaps = 28/211 (13%)
Query: 272 PAEGLGKGIFGNSYKALLEGRAP-----VVVKRLR-----DLKPLITEEFRKQLLVIADQ 321
P +G G +G YKA R P V +K +R + P+ T L +
Sbjct: 8 PVAEIGVGAYGTVYKA----RDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 322 KHPNLLPLLAYYFSN--DEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGV 379
+HPN++ L+ ++ D ++ V + + R + K+ +P L+ R
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM--RQF 121
Query: 380 ARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS- 438
R L++LH + ++H +LK NIL+ V ++D+G + + + +A ++
Sbjct: 122 LRGLDFLH-------ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVT 174
Query: 439 --YKSPEYQSSKKISRKSDVWSFGCLLLELL 467
Y++PE + D+WS GC+ E+
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 66 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 118
Query: 342 VYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
V ++ G +F+ + G+ S+ F A + EYLH D +I+
Sbjct: 119 VMEYVPGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLHSLD-------LIY 164
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSF 459
+LK N+L+D + V+D+GF+ V + Y +PE SK ++ D W+
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 460 GCLLLELLTG 469
G L+ E+ G
Sbjct: 225 GVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 67 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 119
Query: 342 VYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
V ++ G +F+ + G+ S+ F A + EYLH D +I+
Sbjct: 120 VMEYVPGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLHSLD-------LIY 165
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSF 459
+LK N+L+D + V+D+GF+ V + Y +PE SK ++ D W+
Sbjct: 166 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 460 GCLLLELLTG 469
G L+ E+ G
Sbjct: 226 GVLIYEMAAG 235
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 84/199 (42%), Gaps = 22/199 (11%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRLRDLKPLITEEFR---KQLLVIADQKHPNLLPLLA 331
+G G FG Y A + V +K++ E+++ K++ + +HPN +
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 332 YYFSNDEKLLVYKFA-GNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
Y LV ++ G+ + +H + P + V G + L YLH +
Sbjct: 122 CYLREHTAWLVMEYCLGSASDLLEVH-------KKPLQEVEIAAVTHGALQGLAYLHSHN 174
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYKSPEY---QSS 447
+IH ++K+ NILL + +V + D+G +S++A + +PE
Sbjct: 175 -------MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDE 227
Query: 448 KKISRKSDVWSFGCLLLEL 466
+ K DVWS G +EL
Sbjct: 228 GQYDGKVDVWSLGITCIEL 246
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 67 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 119
Query: 342 VYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
V ++ G +F+ + G+ S+ F A + EYLH D +I+
Sbjct: 120 VMEYVPGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLHSLD-------LIY 165
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSF 459
+LK N+L+D + V+D+GF+ V + Y +PE SK ++ D W+
Sbjct: 166 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 460 GCLLLELLTG 469
G L+ E+ G
Sbjct: 226 GVLIYEMAAG 235
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 26/212 (12%)
Query: 275 GLGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEE----FRKQLLVIADQKHPNL 326
GLG G FG Y+ + G +P+ V ++ L + +E+ F + L+I+ H N+
Sbjct: 44 GLGHGAFGEVYEGQVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKFNHQNI 102
Query: 327 LPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLL-VARGVARALEY 385
+ + + + ++ + G+L + + + ++ LL VAR +A +Y
Sbjct: 103 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 162
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILL---DDNEMVLVSDYGFS------SLVAQPIAAQRM 436
L ++ IH ++ + N LL + + D+G + S + A
Sbjct: 163 LE-------ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP 215
Query: 437 ISYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
+ + PE + K+D WSFG LL E+ +
Sbjct: 216 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 67 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 119
Query: 342 VYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
V ++ G +F+ + G+ S+ F A + EYLH D +I+
Sbjct: 120 VMEYVPGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLHSLD-------LIY 165
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSF 459
+LK N+L+D + V+D+GF+ V + Y +PE SK ++ D W+
Sbjct: 166 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 460 GCLLLELLTG 469
G L+ E+ G
Sbjct: 226 GVLIYEMAAG 235
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 86/194 (44%), Gaps = 31/194 (15%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 66 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 118
Query: 342 VYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
V ++ G +F+ + G+ S+ F A + EYLH D +I+
Sbjct: 119 VMEYVAGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLHSLD-------LIY 164
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYKSPEYQS-----SKKISRKSD 455
+LK N+L+D + V+D+GF A+ + + +PEY + SK ++ D
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGF----AKRVKGRTWXLCGTPEYLAPAIILSKGYNKAVD 220
Query: 456 VWSFGCLLLELLTG 469
W+ G L+ E+ G
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 25/203 (12%)
Query: 274 EGLGKGIFGNSYKAL-LEGRAPVVVKRLR--DLKPLITEEFRKQLLVIADQKHPNLLPLL 330
E +G+G +G +KA E V +KR+R D + +++ ++ + KH N++ L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 331 AYYFSNDEKLLVYKFAGNG--NLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
S+ + LV++F F+ +G P +S L + + L + H
Sbjct: 68 DVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLD-----PEIVKSFLF---QLLKGLGFCHS 119
Query: 389 KDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI----AAQRMISYKSPEY 444
++ V+H +LK N+L++ N + ++++G + P+ A + Y+ P+
Sbjct: 120 RN-------VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDV 172
Query: 445 QSSKKISRKS-DVWSFGCLLLEL 466
K+ S D+WS GC+ EL
Sbjct: 173 LFGAKLYSTSIDMWSAGCIFAEL 195
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 67 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 119
Query: 342 VYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
V ++ G +F+ + G+ S+ F A + EYLH D +I+
Sbjct: 120 VMEYVPGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLHSLD-------LIY 165
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSF 459
+LK N+L+D + V+D+GF+ V + Y +PE SK ++ D W+
Sbjct: 166 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 460 GCLLLELLTG 469
G L+ E+ G
Sbjct: 226 GVLIYEMAAG 235
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 66 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 118
Query: 342 VYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
V ++ G +F+ + G+ S+ F A + EYLH D +I+
Sbjct: 119 VMEYVAGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLHSLD-------LIY 164
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSF 459
+LK N+L+D + V+D+GF+ V + Y +PE SK ++ D W+
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 460 GCLLLELLTG 469
G L+ ++ G
Sbjct: 225 GVLIYQMAAG 234
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 66 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 118
Query: 342 VYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
V ++ G +F+ + G+ S+ F A + EYLH D +I+
Sbjct: 119 VMEYVPGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLHSLD-------LIY 164
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSF 459
+LK N+L+D + V+D+GF+ V + Y +PE SK ++ D W+
Sbjct: 165 RDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 460 GCLLLELLTG 469
G L+ E+ G
Sbjct: 225 GVLIYEMAAG 234
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 112/273 (41%), Gaps = 66/273 (24%)
Query: 245 VAGEDRNLVFIED----EQPAGF------------KLNDLLKAPAEG------------- 275
++G R F E +QP+ F K+ ++ P +G
Sbjct: 3 MSGRPRTTSFAESCKPVQQPSAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTK 62
Query: 276 -LGKGIFGNSYKALL--EGRAPVVVKRLRDLKPLITEEFR-KQLLVIADQKHPNLLPLLA 331
+G G FG Y+A L G + K L+D + F+ ++L ++ H N++ L
Sbjct: 63 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCNIVRLRY 116
Query: 332 YYFSNDEKL------LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+++S+ EK LV + ++ +K +P L + R+L Y
Sbjct: 117 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK--LYMYQLFRSLAY 173
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVL-VSDYGFSSLVAQPIAAQRMISYKSPEY 444
+H + H ++K N+LLD + VL + D+G + Q + + +SY Y
Sbjct: 174 IH-------SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSYICSRY 223
Query: 445 QSSKKI-------SRKSDVWSFGCLLLELLTGR 470
+ ++ + DVWS GC+L ELL G+
Sbjct: 224 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 87 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 139
Query: 342 VYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
V ++ G +F+ + G+ S+ F A + EYLH D +I+
Sbjct: 140 VMEYVPGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLHSLD-------LIY 185
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSF 459
+LK N+L+D + V+D+GF+ V + Y +PE SK ++ D W+
Sbjct: 186 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 245
Query: 460 GCLLLELLTG 469
G L+ E+ G
Sbjct: 246 GVLIYEMAAG 255
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 112/273 (41%), Gaps = 66/273 (24%)
Query: 245 VAGEDRNLVFIED----EQPAGF------------KLNDLLKAPAEG------------- 275
++G R F E +QP+ F K+ ++ P +G
Sbjct: 1 MSGRPRTTSFAESCKPVQQPSAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTK 60
Query: 276 -LGKGIFGNSYKALL--EGRAPVVVKRLRDLKPLITEEFR-KQLLVIADQKHPNLLPLLA 331
+G G FG Y+A L G + K L+D + F+ ++L ++ H N++ L
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCNIVRLRY 114
Query: 332 YYFSNDEKL------LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+++S+ EK LV + ++ +K +P L + R+L Y
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK--LYMYQLFRSLAY 171
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVL-VSDYGFSSLVAQPIAAQRMISYKSPEY 444
+H + H ++K N+LLD + VL + D+G + Q + + +SY Y
Sbjct: 172 IH-------SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSYICSRY 221
Query: 445 QSSKKI-------SRKSDVWSFGCLLLELLTGR 470
+ ++ + DVWS GC+L ELL G+
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 29/173 (16%)
Query: 375 VARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQ 434
+A + +ALE+LH K +VIH ++K +N+L++ V D+G S + +A
Sbjct: 141 IAVSIVKALEHLHSK------LSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKD 194
Query: 435 ---RMISYKSPEY----QSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCS 487
Y +PE + K S KSD+WS G +EL R S
Sbjct: 195 IDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQ----- 249
Query: 488 WVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEV 540
L+ V EE + ++ + S + + QC K+ ++RP E+
Sbjct: 250 --LKQVVEEPSPQLPADKFSAE---------FVDFTSQCLKKNSKERPTYPEL 291
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 90/218 (41%), Gaps = 55/218 (25%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRD--------LKPLITEEFR-KQLLVIADQKHPNL 326
LG+G FG V R++D +K + E FR ++L+ A P +
Sbjct: 80 LGRGSFGE-------------VHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRI 126
Query: 327 LPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIP-FRC--RSRLLVARGVA-RA 382
+PL Y + E V N+F + G S I C R L G A
Sbjct: 127 VPL---YGAVREGPWV-------NIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEG 176
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLD-DNEMVLVSDYGFSSLVAQPIAAQRMI---- 437
LEYLH + ++HG++K+ N+LL D + D+G + L QP + +
Sbjct: 177 LEYLHTRR-------ILHGDVKADNVLLSSDGSRAALCDFGHA-LCLQPDGLGKSLLTGD 228
Query: 438 ------SYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
++ +PE K K D+WS C++L +L G
Sbjct: 229 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 98/228 (42%), Gaps = 32/228 (14%)
Query: 265 LNDLLKAPAE------GLGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEE---- 310
++DL + P + GLG G FG Y+ + G +P+ V ++ L + +E+
Sbjct: 48 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVA-VKTLPEVCSEQDELD 106
Query: 311 FRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCR 370
F + L+I+ H N++ + + + ++ + G+L + + + ++
Sbjct: 107 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 166
Query: 371 SRLL-VARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILL---DDNEMVLVSDYGFS-- 424
LL VAR +A +YL ++ IH ++ + N LL + + D+G +
Sbjct: 167 LDLLHVARDIACGCQYLE-------ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 219
Query: 425 ----SLVAQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
S + A + + PE + K+D WSFG LL E+ +
Sbjct: 220 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 115/273 (42%), Gaps = 66/273 (24%)
Query: 245 VAGEDRNLVFIED----EQPAGF------------KLNDLLKAPAEG------------- 275
++G R F E +QP+ F K+ ++ P +G
Sbjct: 46 MSGRPRTTSFAESCKPVQQPSAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTK 105
Query: 276 -LGKGIFGNSYKALL--EGRAPVVVKRLRDLKPLITEEFR-KQLLVIADQKHPNLLPLLA 331
+G G FG Y+A L G + K L+D + F+ ++L ++ H N++ L
Sbjct: 106 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCNIVRLRY 159
Query: 332 YYFSNDEKL------LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+++S+ EK LV + ++ +K +P +L + + + R+L Y
Sbjct: 160 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPV-IYVKLYMYQ-LFRSLAY 216
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVL-VSDYGFSSLVAQPIAAQRMISYKSPEY 444
+H + H ++K N+LLD + VL + D+G + Q + + +SY Y
Sbjct: 217 IH-------SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSYICSRY 266
Query: 445 QSSKKI-------SRKSDVWSFGCLLLELLTGR 470
+ ++ + DVWS GC+L ELL G+
Sbjct: 267 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 84/199 (42%), Gaps = 22/199 (11%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRLRDLKPLITEEFR---KQLLVIADQKHPNLLPLLA 331
+G G FG Y A + V +K++ E+++ K++ + +HPN +
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 332 YYFSNDEKLLVYKFA-GNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
Y LV ++ G+ + +H + P + V G + L YLH +
Sbjct: 83 CYLREHTAWLVMEYCLGSASDLLEVH-------KKPLQEVEIAAVTHGALQGLAYLHSHN 135
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYKSPEY---QSS 447
+IH ++K+ NILL + +V + D+G +S++A + +PE
Sbjct: 136 -------MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDE 188
Query: 448 KKISRKSDVWSFGCLLLEL 466
+ K DVWS G +EL
Sbjct: 189 GQYDGKVDVWSLGITCIEL 207
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 102/240 (42%), Gaps = 50/240 (20%)
Query: 262 GFKLNDLLKAPAEG--------------LGKGIFGNSYKALL--EGRAPVVVKRLRDLKP 305
G K+ ++ P +G +G G FG Y+A L G + K L+D
Sbjct: 28 GSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--- 84
Query: 306 LITEEFR-KQLLVIADQKHPNLLPLLAYYFSNDEKL------LVYKFAGNGNLFNRIHGG 358
+ F+ ++L ++ H N++ L +++S+ EK LV + ++
Sbjct: 85 ---KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHY 140
Query: 359 KSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVL- 417
+K +P L + R+L Y+H + H ++K N+LLD + VL
Sbjct: 141 SRAKQTLPVIYVK--LYMYQLFRSLAYIH-------SFGICHRDIKPQNLLLDPDTAVLK 191
Query: 418 VSDYGFSSLVAQPIAAQRMISYKSPEYQSSKKI-------SRKSDVWSFGCLLLELLTGR 470
+ D+G + Q + + +SY Y + ++ + DVWS GC+L ELL G+
Sbjct: 192 LCDFGSAK---QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 69/162 (42%), Gaps = 20/162 (12%)
Query: 314 QLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRL 373
++ V+ HPN++ L ++ LV + G LF+ I R F
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI------ILRQKFSEVDAA 107
Query: 374 LVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDD---NEMVLVSDYGFSSLVAQP 430
++ + V YLH + ++H +LK N+LL+ + ++ + D+G S+
Sbjct: 108 VIMKQVLSGTTYLHKHN-------IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG 160
Query: 431 IAAQRMIS---YKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
+ + Y +PE KK K DVWS G +L LL G
Sbjct: 161 GKMKERLGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCG 201
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 21/163 (12%)
Query: 398 VIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP------IAAQRMISYKSPEYQSSK-KI 450
+IH ++K NIL+ + +V + D+GF+ +A P A R Y++PE K
Sbjct: 145 IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRW--YRAPELLVGDVKY 202
Query: 451 SRKSDVWSFGCLLLELLTGR--ISTHSAPQGINGADLCSWVLRAVREEW------TAEIF 502
+ DVW+ GCL+ E+ G S + +C L +E A +
Sbjct: 203 GKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVR 262
Query: 503 DSEISVQRSAAHGMLKLLQVAI----QCCNKSPEKRPEMAEVV 541
EI + KL +V I +C + P+KRP AE++
Sbjct: 263 LPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELL 305
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 107/276 (38%), Gaps = 45/276 (16%)
Query: 282 GNSYKALLEGRAPVV-VKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSN--DE 338
G +K +G VV V ++RD + +F ++ + HPN+LP+L S
Sbjct: 24 GELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH 83
Query: 339 KLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAV 398
L+ + G+L+N +H G + + L ARG A +LH + + A+
Sbjct: 84 PTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXA----FLHTLEPLIPRHAL 139
Query: 399 IHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYKSPEYQSSKKISRKSDVWS 458
N +S I D + +D FS A ++ ++ + + R +D WS
Sbjct: 140 ---NSRSVXIDEDXTARISXADVKFSFQSPGRXYAPAWVAPEALQKKPEDTNRRSADXWS 196
Query: 459 FGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLK 518
F LL EL+T RE A++ + EI + A G+
Sbjct: 197 FAVLLWELVT-------------------------REVPFADLSNXEIG-XKVALEGLRP 230
Query: 519 LLQVAIQ---------CCNKSPEKRPEMAEVVSELE 545
+ I C N+ P KRP+ +V LE
Sbjct: 231 TIPPGISPHVSKLXKICXNEDPAKRPKFDXIVPILE 266
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 102/240 (42%), Gaps = 50/240 (20%)
Query: 262 GFKLNDLLKAPAEG--------------LGKGIFGNSYKALL--EGRAPVVVKRLRDLKP 305
G K+ ++ P +G +G G FG Y+A L G + K L+D
Sbjct: 13 GSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--- 69
Query: 306 LITEEFR-KQLLVIADQKHPNLLPLLAYYFSNDEKL------LVYKFAGNGNLFNRIHGG 358
+ F+ ++L ++ H N++ L +++S+ EK LV + ++
Sbjct: 70 ---KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHY 125
Query: 359 KSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVL- 417
+K +P L + R+L Y+H + H ++K N+LLD + VL
Sbjct: 126 SRAKQTLPVIYVK--LYMYQLFRSLAYIH-------SFGICHRDIKPQNLLLDPDTAVLK 176
Query: 418 VSDYGFSSLVAQPIAAQRMISYKSPEYQSSKKI-------SRKSDVWSFGCLLLELLTGR 470
+ D+G + Q + + +SY Y + ++ + DVWS GC+L ELL G+
Sbjct: 177 LCDFGSAK---QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 111/272 (40%), Gaps = 66/272 (24%)
Query: 246 AGEDRNLVFIED----EQPAGF------------KLNDLLKAPAEG-------------- 275
+G R F E +QP+ F K+ ++ P +G
Sbjct: 6 SGRPRTTSFAESCKPVQQPSAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKV 65
Query: 276 LGKGIFGNSYKALL--EGRAPVVVKRLRDLKPLITEEFR-KQLLVIADQKHPNLLPLLAY 332
+G G FG Y+A L G + K L+D + F+ ++L ++ H N++ L +
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCNIVRLRYF 119
Query: 333 YFSNDEKL------LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYL 386
++S+ EK LV + ++ +K +P L + R+L Y+
Sbjct: 120 FYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK--LYMYQLFRSLAYI 176
Query: 387 HHKDKSRTQSAVIHGNLKSTNILLDDNEMVL-VSDYGFSSLVAQPIAAQRMISYKSPEYQ 445
H + H ++K N+LLD + VL + D+G + Q + + +SY Y
Sbjct: 177 H-------SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSYICSRYY 226
Query: 446 SSKKI-------SRKSDVWSFGCLLLELLTGR 470
+ ++ + DVWS GC+L ELL G+
Sbjct: 227 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 85/190 (44%), Gaps = 23/190 (12%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L++++ + E K++L + P L+ L + N +
Sbjct: 66 GNHYAMKILDKQKVV--KLKEIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 118
Query: 342 VYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
V ++A G +F+ + G+ S+ F A + EYLH D +I+
Sbjct: 119 VMEYAPGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLHSLD-------LIY 164
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSF 459
+LK N+++D + V+D+G + V + Y +PE SK ++ D W+
Sbjct: 165 RDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 460 GCLLLELLTG 469
G L+ E+ G
Sbjct: 225 GVLIYEMAAG 234
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLI--TEEFRKQLLVIADQKHPNLLPLL 330
+ LG+G G A+ V ++ D+K + E +K++ + H N++
Sbjct: 11 VQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
+ + + L ++ G LF+RI R +L+ GV YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV----YLH--- 121
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS-------YKSPE 443
+ H ++K N+LLD+ + + +SD+G ++ V + +R+++ Y +PE
Sbjct: 122 ----GIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRYNNRERLLNKMCGTLPYVAPE 176
Query: 444 YQSSKKI-SRKSDVWSFGCLLLELLTGRI 471
++ + DVWS G +L +L G +
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 68/146 (46%), Gaps = 15/146 (10%)
Query: 326 LLPLLAYYFSNDEKL-LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALE 384
L L + F ++ L +V ++A G +F+ H + + P +R A+ + E
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFXEP---HARFYAAQ-IVLTFE 156
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPE 443
YLH D +I+ +LK N+++D + V+D+GF+ V + Y +PE
Sbjct: 157 YLHSLD-------LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPE 209
Query: 444 YQSSKKISRKSDVWSFGCLLLELLTG 469
SK ++ D W+ G L+ E+ G
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 86/211 (40%), Gaps = 25/211 (11%)
Query: 276 LGKGIFGNSYKALLEGRAP------VVVKRLRDLKPLITEEFRKQLLVIADQ--KHPNLL 327
LG G FG +A G V VK L+ +E L I +H N++
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFN----RIHGGKSSKNRIPFRCRSRLLVARGVARAL 383
LL L++ ++ G+L N + ++ P R L + VA+ +
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 165
Query: 384 EYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIA------AQRMI 437
+L K+ IH ++ + N+LL + + + D+G + + A+ +
Sbjct: 166 AFLASKN-------CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 218
Query: 438 SYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
+ +PE + +SDVWS+G LL E+ +
Sbjct: 219 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 21/103 (20%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP-------- 430
+ R L+Y+H + V+H +LK +N+L++ + + D+G + +A P
Sbjct: 153 ILRGLKYIH-------SANVLHRDLKPSNLLINTTCDLKICDFGLAR-IADPEHDHTGFL 204
Query: 431 --IAAQRMISYKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
A R Y++PE +SK ++ D+WS GC+L E+L+ R
Sbjct: 205 TEXVATRW--YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 21/189 (11%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 66 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 118
Query: 342 VYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHG 401
V ++ G +F+ H + + P +R A+ + EYLH D +I+
Sbjct: 119 VMEYVPGGEMFS--HLRRIGRFXEP---HARFYAAQ-IVLTFEYLHSLD-------LIYR 165
Query: 402 NLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFG 460
+LK N+L+D + V+D+GF+ V + Y +PE SK ++ D W+ G
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 461 CLLLELLTG 469
L+ E+ G
Sbjct: 226 VLIYEMAAG 234
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 21/189 (11%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 59 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 111
Query: 342 VYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHG 401
V ++ G +F+ H + + P +R A+ + EYLH D +I+
Sbjct: 112 VMEYVPGGEMFS--HLRRIGRFXEP---HARFYAAQ-IVLTFEYLHSLD-------LIYR 158
Query: 402 NLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFG 460
+LK N+L+D + V+D+GF+ V + Y +PE SK ++ D W+ G
Sbjct: 159 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 218
Query: 461 CLLLELLTG 469
L+ E+ G
Sbjct: 219 VLIYEMAAG 227
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 21/189 (11%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 67 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 119
Query: 342 VYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHG 401
V ++ G +F+ H + + P +R A+ + EYLH D +I+
Sbjct: 120 VMEYVPGGEMFS--HLRRIGRFXEP---HARFYAAQ-IVLTFEYLHSLD-------LIYR 166
Query: 402 NLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFG 460
+LK N+L+D + V+D+GF+ V + Y +PE SK ++ D W+ G
Sbjct: 167 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 461 CLLLELLTG 469
L+ E+ G
Sbjct: 227 VLIYEMAAG 235
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 79/205 (38%), Gaps = 22/205 (10%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRK---QLLVIADQKHPNLLPLL 330
E LGKG F + + + ++ + K L +F+K + + +HPN++ L
Sbjct: 11 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 70
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
LV+ G LF I + C ++L ++ Y H
Sbjct: 71 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL------ESIAYCH--- 121
Query: 391 KSRTQSAVIHGNLKSTNILLDD---NEMVLVSDYGFSSLVAQPIAAQRMIS---YKSPEY 444
+ ++H NLK N+LL V ++D+G + V A Y SPE
Sbjct: 122 ----SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEV 177
Query: 445 QSSKKISRKSDVWSFGCLLLELLTG 469
S+ D+W+ G +L LL G
Sbjct: 178 LKKDPYSKPVDIWACGVILYILLVG 202
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 21/189 (11%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 66 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 118
Query: 342 VYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHG 401
V ++ G +F+ H + + P +R A+ + EYLH D +I+
Sbjct: 119 VMEYVPGGEMFS--HLRRIGRFXEP---HARFYAAQ-IVLTFEYLHSLD-------LIYR 165
Query: 402 NLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFG 460
+LK N+L+D + V+D+GF+ V + Y +PE SK ++ D W+ G
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 461 CLLLELLTG 469
L+ E+ G
Sbjct: 226 VLIYEMAAG 234
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 85/190 (44%), Gaps = 23/190 (12%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L++++ + E K++L + P L+ L + N +
Sbjct: 66 GNHYAMKILDKQKVV--KLKEIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 118
Query: 342 VYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
V ++A G +F+ + G+ S+ F A + EYLH D +I+
Sbjct: 119 VMEYAPGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLHSLD-------LIY 164
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSSLV-AQPIAAQRMISYKSPEYQSSKKISRKSDVWSF 459
+LK N+++D + V+D+G + V + Y +PE SK ++ D W+
Sbjct: 165 RDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 460 GCLLLELLTG 469
G L+ E+ G
Sbjct: 225 GVLIYEMAAG 234
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 79/205 (38%), Gaps = 22/205 (10%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRK---QLLVIADQKHPNLLPLL 330
E LGKG F + + + ++ + K L +F+K + + +HPN++ L
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
LV+ G LF I + C ++L ++ Y H
Sbjct: 72 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL------ESIAYCH--- 122
Query: 391 KSRTQSAVIHGNLKSTNILLDD---NEMVLVSDYGFSSLVAQPIAAQRMIS---YKSPEY 444
+ ++H NLK N+LL V ++D+G + V A Y SPE
Sbjct: 123 ----SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEV 178
Query: 445 QSSKKISRKSDVWSFGCLLLELLTG 469
S+ D+W+ G +L LL G
Sbjct: 179 LKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 91/212 (42%), Gaps = 26/212 (12%)
Query: 275 GLGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEE----FRKQLLVIADQKHPNL 326
GLG G FG Y+ + G +P+ V ++ L + +E+ F + L+I+ H N+
Sbjct: 78 GLGHGAFGEVYEGQVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKFNHQNI 136
Query: 327 LPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLL-VARGVARALEY 385
+ + + + ++ + G+L + + + ++ LL VAR +A +Y
Sbjct: 137 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 196
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILL---DDNEMVLVSDYGFSSLVAQPI------AAQRM 436
L ++ IH ++ + N LL + + D+G + + + A
Sbjct: 197 LE-------ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLP 249
Query: 437 ISYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
+ + PE + K+D WSFG LL E+ +
Sbjct: 250 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 377 RGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM 436
R R L++LH + ++H +LK NIL+ V ++D+G + + + +A +
Sbjct: 127 RQFLRGLDFLH-------ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPV 179
Query: 437 IS---YKSPEYQSSKKISRKSDVWSFGCLLLELL 467
+ Y++PE + D+WS GC+ E+
Sbjct: 180 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 94/212 (44%), Gaps = 36/212 (16%)
Query: 276 LGKGIFGNSYKALL--EGRAPVVVKRLRDLKPLITEEFR-KQLLVIADQKHPNLLPLLAY 332
+G G FG Y+A L G + K L+D + F+ ++L ++ H N++ L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 333 YFSNDEKL------LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYL 386
++S+ EK LV + ++ +K +P L + R+L Y+
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK--LYMYQLFRSLAYI 138
Query: 387 HHKDKSRTQSAVIHGNLKSTNILLDDNEMVL-VSDYGFSSLVAQPIAAQRMISYKSPEYQ 445
H + H ++K N+LLD + VL + D+G + Q + + +SY Y
Sbjct: 139 H-------SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSYICSRYY 188
Query: 446 SSKKI-------SRKSDVWSFGCLLLELLTGR 470
+ ++ + DVWS GC+L ELL G+
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 21/170 (12%)
Query: 307 ITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRI-HGGKSSKNRI 365
I E +++++ +HPN++ + +V ++A G LF RI + G+ S++
Sbjct: 58 IDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEA 117
Query: 366 PFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM--VLVSDYGF 423
F + + + Y H V H +LK N LLD + + + +G+
Sbjct: 118 RF-------FFQQLISGVSYCH-------AMQVCHRDLKLENTLLDGSPAPRLKICAFGY 163
Query: 424 SS---LVAQPIAAQRMISYKSPEYQSSKKISRK-SDVWSFGCLLLELLTG 469
S L +QP + +Y +PE K+ K +DVWS G L +L G
Sbjct: 164 SKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 79/205 (38%), Gaps = 22/205 (10%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRK---QLLVIADQKHPNLLPLL 330
E LGKG F + + + ++ + K L +F+K + + +HPN++ L
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
LV+ G LF I + C ++L ++ Y H
Sbjct: 72 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL------ESIAYCH--- 122
Query: 391 KSRTQSAVIHGNLKSTNILLDD---NEMVLVSDYGFSSLVAQPIAAQRMIS---YKSPEY 444
+ ++H NLK N+LL V ++D+G + V A Y SPE
Sbjct: 123 ----SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEV 178
Query: 445 QSSKKISRKSDVWSFGCLLLELLTG 469
S+ D+W+ G +L LL G
Sbjct: 179 LKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 69/162 (42%), Gaps = 20/162 (12%)
Query: 314 QLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRL 373
++ V+ HPN++ L ++ LV + G LF+ I R F
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI------ILRQKFSEVDAA 124
Query: 374 LVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDD---NEMVLVSDYGFSSLVAQP 430
++ + V YLH + ++H +LK N+LL+ + ++ + D+G S+
Sbjct: 125 VIMKQVLSGTTYLHKHN-------IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG 177
Query: 431 IAAQRMIS---YKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
+ + Y +PE KK K DVWS G +L LL G
Sbjct: 178 GKMKERLGTAYYIAPEVL-RKKYDEKCDVWSCGVILYILLCG 218
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 92/211 (43%), Gaps = 28/211 (13%)
Query: 272 PAEGLGKGIFGNSYKALLEGRAP-----VVVKRLR-----DLKPLITEEFRKQLLVIADQ 321
P +G G +G YKA R P V +K +R + P+ T L +
Sbjct: 8 PVAEIGVGAYGTVYKA----RDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 322 KHPNLLPLLAYYFSN--DEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGV 379
+HPN++ L+ ++ D ++ V + + R + K+ +P L+ R
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM--RQF 121
Query: 380 ARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS- 438
R L++LH + ++H +LK NIL+ V ++D+G + + + +A ++
Sbjct: 122 LRGLDFLH-------ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVT 174
Query: 439 --YKSPEYQSSKKISRKSDVWSFGCLLLELL 467
Y++PE + D+WS GC+ E+
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 94/212 (44%), Gaps = 36/212 (16%)
Query: 276 LGKGIFGNSYKALL--EGRAPVVVKRLRDLKPLITEEFR-KQLLVIADQKHPNLLPLLAY 332
+G G FG Y+A L G + K L+D + F+ ++L ++ H N++ L +
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCNIVRLRYF 86
Query: 333 YFSNDEKL------LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYL 386
++S+ EK LV + ++ +K +P L + R+L Y+
Sbjct: 87 FYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK--LYMYQLFRSLAYI 143
Query: 387 HHKDKSRTQSAVIHGNLKSTNILLDDNEMVL-VSDYGFSSLVAQPIAAQRMISYKSPEYQ 445
H + H ++K N+LLD + VL + D+G + Q + + +SY Y
Sbjct: 144 H-------SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSYICSRYY 193
Query: 446 SSKKI-------SRKSDVWSFGCLLLELLTGR 470
+ ++ + DVWS GC+L ELL G+
Sbjct: 194 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 86/211 (40%), Gaps = 25/211 (11%)
Query: 276 LGKGIFGNSYKALLEGRAP------VVVKRLRDLKPLITEEFRKQLLVIADQ--KHPNLL 327
LG G FG +A G V VK L+ +E L I +H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFN----RIHGGKSSKNRIPFRCRSRLLVARGVARAL 383
LL L++ ++ G+L N + ++ P R L + VA+ +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 173
Query: 384 EYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIA------AQRMI 437
+L K+ IH ++ + N+LL + + + D+G + + A+ +
Sbjct: 174 AFLASKN-------CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 226
Query: 438 SYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
+ +PE + +SDVWS+G LL E+ +
Sbjct: 227 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 91/212 (42%), Gaps = 26/212 (12%)
Query: 275 GLGKGIFGNSYKALLEGR----APVVVKRLRDLKPLITEE----FRKQLLVIADQKHPNL 326
GLG G FG Y+ + G +P+ V ++ L + +E+ F + L+I+ H N+
Sbjct: 55 GLGHGAFGEVYEGQVSGMPNDPSPLQVA-VKTLPEVCSEQDELDFLMEALIISKFNHQNI 113
Query: 327 LPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLL-VARGVARALEY 385
+ + + + ++ + G+L + + + ++ LL VAR +A +Y
Sbjct: 114 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 173
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILL---DDNEMVLVSDYGFSSLVAQPI------AAQRM 436
L ++ IH ++ + N LL + + D+G + + + A
Sbjct: 174 LE-------ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLP 226
Query: 437 ISYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
+ + PE + K+D WSFG LL E+ +
Sbjct: 227 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 113/273 (41%), Gaps = 66/273 (24%)
Query: 245 VAGEDRNLVFIED----EQPAGF------------KLNDLLKAPAEG------------- 275
++G R F E +QP+ F K+ ++ P +G
Sbjct: 1 MSGRPRTTSFAESCKPVQQPSAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTK 60
Query: 276 -LGKGIFGNSYKALL--EGRAPVVVKRLRDLKPLITEEFR-KQLLVIADQKHPNLLPLLA 331
+G G FG Y+A L G + K L+D + F+ ++L ++ H N++ L
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCNIVRLRY 114
Query: 332 YYFSNDEKL------LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+++S+ EK LV + ++ +K +P L + R+L Y
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK--LYMYQLFRSLAY 171
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEMVL-VSDYGFSSLVAQPIAAQRMIS------ 438
+H + H ++K N+LLD + VL + D+G + Q + + +S
Sbjct: 172 IH-------SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSXICSRY 221
Query: 439 YKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
Y++PE + + DVWS GC+L ELL G+
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 89/210 (42%), Gaps = 36/210 (17%)
Query: 276 LGKGIFGNSY--KALLEGRAPVV-------VKRLRDLKPLITE-EFRKQLLVIADQKHPN 325
LGKG FG K + G+ V VK+ D + L+ E + KQL HPN
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL------DHPN 87
Query: 326 LLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
+ L ++ LV + G LF+ I S+ R +R++ R V + Y
Sbjct: 88 IXKLYEFFEDKGYFYLVGEVYTGGELFDEI----ISRKRFSEVDAARII--RQVLSGITY 141
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDD---NEMVLVSDYGFSSLVAQPIAAQRMIS---Y 439
H ++ ++H +LK N+LL+ + + + D+G S+ + I Y
Sbjct: 142 XH-------KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYY 194
Query: 440 KSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
+PE K DVWS G +L LL+G
Sbjct: 195 IAPEVLHGT-YDEKCDVWSTGVILYILLSG 223
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 21/170 (12%)
Query: 307 ITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRI-HGGKSSKNRI 365
I E +++++ +HPN++ + ++ ++A G L+ RI + G+ S++
Sbjct: 59 IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEA 118
Query: 366 PFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM--VLVSDYGF 423
F + L + Y H + H +LK N LLD + + + D+G+
Sbjct: 119 RFFFQQLL-------SGVSYCH-------SMQICHRDLKLENTLLDGSPAPRLKICDFGY 164
Query: 424 SS---LVAQPIAAQRMISYKSPEYQSSKKISRK-SDVWSFGCLLLELLTG 469
S L +QP + +Y +PE ++ K +DVWS G L +L G
Sbjct: 165 SKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 23/105 (21%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS 438
+A A+E+LH K ++H +LK +NI +++V V D+G + + Q Q +++
Sbjct: 173 IAEAVEFLHSK-------GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 439 ----------------YKSPEYQSSKKISRKSDVWSFGCLLLELL 467
Y SPE S K D++S G +L ELL
Sbjct: 226 PMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 101/233 (43%), Gaps = 28/233 (12%)
Query: 253 VFIEDEQPAGFKLNDLLKAPAEGLGKGIFGNSYKA----LLEGRAP--VVVKRLRDLKPL 306
VF+ DE + LL+ LG+G FG Y+ +++G A V VK + + L
Sbjct: 6 VFVPDEWEVSREKITLLRE----LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL 61
Query: 307 ITE-EFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHG----GKSS 361
EF + V+ +++ LL L+V + +G+L + + +++
Sbjct: 62 RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN 121
Query: 362 KNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDY 421
R P + + +A +A + YL+ K +H +L + N ++ + V + D+
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYLNAK-------KFVHRDLAARNCMVAHDFTVKIGDF 174
Query: 422 GFSSLVAQPIAAQR------MISYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
G + + + ++ + + +PE + SD+WSFG +L E+ +
Sbjct: 175 GMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 89/210 (42%), Gaps = 39/210 (18%)
Query: 276 LGKGIFGNSYKALLEGRAP---VVVKRLRDLKPLITEEFR-KQLLVIADQKHPNLLPLLA 331
LG+G FG ++ +E + VK++R E FR ++L+ A P ++PL
Sbjct: 101 LGRGSFGEVHR--MEDKQTGFQCAVKKVR------LEVFRAEELMACAGLTSPRIVPLYG 152
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVA-RALEYLHHKD 390
+ + G+L + + +P R L G A LEYLH +
Sbjct: 153 AVREGPWVNIFMELLEGGSLGQLV----KEQGCLP---EDRALYYLGQALEGLEYLHSRR 205
Query: 391 KSRTQSAVIHGNLKSTNILLD-DNEMVLVSDYGFSSLVAQPIAAQRMI----------SY 439
++HG++K+ N+LL D + D+G + + QP + + ++
Sbjct: 206 -------ILHGDVKADNVLLSSDGSHAALCDFGHA-VCLQPDGLGKSLLTGDYIPGTETH 257
Query: 440 KSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
+PE + K DVWS C++L +L G
Sbjct: 258 MAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 101/233 (43%), Gaps = 28/233 (12%)
Query: 253 VFIEDEQPAGFKLNDLLKAPAEGLGKGIFGNSYKA----LLEGRAP--VVVKRLRDLKPL 306
VF+ DE + LL+ LG+G FG Y+ +++G A V VK + + L
Sbjct: 3 VFVPDEWEVSREKITLLRE----LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL 58
Query: 307 ITE-EFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHG----GKSS 361
EF + V+ +++ LL L+V + +G+L + + +++
Sbjct: 59 RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN 118
Query: 362 KNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDY 421
R P + + +A +A + YL+ K +H +L + N ++ + V + D+
Sbjct: 119 PGRPPPTLQEMIQMAAEIADGMAYLNAK-------KFVHRDLAARNCMVAHDFTVKIGDF 171
Query: 422 GFSSLVAQPIAAQR------MISYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
G + + + ++ + + +PE + SD+WSFG +L E+ +
Sbjct: 172 GMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 37/197 (18%)
Query: 311 FRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCR 370
FR+ ++ Q H N+L L+ ++ D LV++ G++ + IH R F
Sbjct: 58 FREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIH------KRRHFNEL 111
Query: 371 SRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDD-NEM--VLVSDYGFSSLV 427
+V + VA AL++LH+K + H +LK NIL + N++ V + D+ S +
Sbjct: 112 EASVVVQDVASALDFLHNK-------GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGI 164
Query: 428 -----AQPIAAQRMIS------YKSPEY-----QSSKKISRKSDVWSFGCLLLELLTGRI 471
PI+ +++ Y +PE + + ++ D+WS G +L LL+G
Sbjct: 165 KLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG-- 222
Query: 472 STHSAPQGINGADLCSW 488
+ G G+D C W
Sbjct: 223 --YPPFVGRCGSD-CGW 236
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 90/218 (41%), Gaps = 55/218 (25%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRD--------LKPLITEEFR-KQLLVIADQKHPNL 326
+G+G FG V R++D +K + E FR ++L+ A P +
Sbjct: 66 VGRGSFGE-------------VHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRI 112
Query: 327 LPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIP-FRC--RSRLLVARGVA-RA 382
+PL Y + E V N+F + G S I C R L G A
Sbjct: 113 VPL---YGAVREGPWV-------NIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEG 162
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLD-DNEMVLVSDYGFSSLVAQPIAAQRMI---- 437
LEYLH + ++HG++K+ N+LL D + D+G + L QP + +
Sbjct: 163 LEYLHTRR-------ILHGDVKADNVLLSSDGSRAALCDFGHA-LCLQPDGLGKSLLTGD 214
Query: 438 ------SYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
++ +PE K K D+WS C++L +L G
Sbjct: 215 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 90/218 (41%), Gaps = 55/218 (25%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRD--------LKPLITEEFR-KQLLVIADQKHPNL 326
+G+G FG V R++D +K + E FR ++L+ A P +
Sbjct: 82 VGRGSFGE-------------VHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRI 128
Query: 327 LPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIP-FRC--RSRLLVARGVA-RA 382
+PL Y + E V N+F + G S I C R L G A
Sbjct: 129 VPL---YGAVREGPWV-------NIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEG 178
Query: 383 LEYLHHKDKSRTQSAVIHGNLKSTNILLD-DNEMVLVSDYGFSSLVAQPIAAQRMI---- 437
LEYLH + ++HG++K+ N+LL D + D+G + L QP + +
Sbjct: 179 LEYLHTRR-------ILHGDVKADNVLLSSDGSRAALCDFGHA-LCLQPDGLGKSLLTGD 230
Query: 438 ------SYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
++ +PE K K D+WS C++L +L G
Sbjct: 231 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 79/205 (38%), Gaps = 22/205 (10%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRK---QLLVIADQKHPNLLPLL 330
E LGKG F + + + ++ + K L +F+K + + +HPN++ L
Sbjct: 35 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 94
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
LV+ G LF I + C ++L ++ Y H
Sbjct: 95 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL------ESIAYCH--- 145
Query: 391 KSRTQSAVIHGNLKSTNILLDD---NEMVLVSDYGFSSLVAQPIAAQRMIS---YKSPEY 444
+ ++H NLK N+LL V ++D+G + V A Y SPE
Sbjct: 146 ----SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEV 201
Query: 445 QSSKKISRKSDVWSFGCLLLELLTG 469
S+ D+W+ G +L LL G
Sbjct: 202 LKKDPYSKPVDIWACGVILYILLVG 226
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 103/240 (42%), Gaps = 50/240 (20%)
Query: 262 GFKLNDLLKAPAEG--------------LGKGIFGNSYKALL--EGRAPVVVKRLRDLKP 305
G K+ ++ P +G +G G FG Y+A L G + K L+D
Sbjct: 8 GSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--- 64
Query: 306 LITEEFR-KQLLVIADQKHPNLLPLLAYYFSNDEKL------LVYKFAGNGNLFNRIHGG 358
+ F+ ++L ++ H N++ L +++S+ EK LV + ++
Sbjct: 65 ---KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHY 120
Query: 359 KSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVL- 417
+K +P L + R+L Y+H + H ++K N+LLD + VL
Sbjct: 121 SRAKQTLPVIYVK--LYMYQLFRSLAYIH-------SFGICHRDIKPQNLLLDPDTAVLK 171
Query: 418 VSDYGFSSLVAQPIAAQRMIS------YKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
+ D+G + Q + + +S Y++PE + + DVWS GC+L ELL G+
Sbjct: 172 LCDFGSAK---QLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 103/240 (42%), Gaps = 50/240 (20%)
Query: 262 GFKLNDLLKAPAEG--------------LGKGIFGNSYKALL--EGRAPVVVKRLRDLKP 305
G K+ ++ P +G +G G FG Y+A L G + K L+D
Sbjct: 12 GSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--- 68
Query: 306 LITEEFR-KQLLVIADQKHPNLLPLLAYYFSNDEKL------LVYKFAGNGNLFNRIHGG 358
+ F+ ++L ++ H N++ L +++S+ EK LV + ++
Sbjct: 69 ---KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHY 124
Query: 359 KSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVL- 417
+K +P L + R+L Y+H + H ++K N+LLD + VL
Sbjct: 125 SRAKQTLPVIYVK--LYMYQLFRSLAYIH-------SFGICHRDIKPQNLLLDPDTAVLK 175
Query: 418 VSDYGFSSLVAQPIAAQRMIS------YKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
+ D+G + Q + + +S Y++PE + + DVWS GC+L ELL G+
Sbjct: 176 LCDFGSAK---QLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 17/165 (10%)
Query: 309 EEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNL--FNRIHG--GKSSKNR 364
++F+ +L +I D K+ L + DE ++Y++ N ++ F+ K+
Sbjct: 88 DDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCF 147
Query: 365 IPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS 424
IP + + + V + Y+H+ + + H ++K +NIL+D N V +SD+G S
Sbjct: 148 IPIQVIK--CIIKSVLNSFSYIHN------EKNICHRDVKPSNILMDKNGRVKLSDFGES 199
Query: 425 S-LVAQPIAAQR-MISYKSPEYQS--SKKISRKSDVWSFG-CLLL 464
+V + I R + PE+ S S K D+WS G CL +
Sbjct: 200 EYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYV 244
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 103/240 (42%), Gaps = 50/240 (20%)
Query: 262 GFKLNDLLKAPAEG--------------LGKGIFGNSYKALL--EGRAPVVVKRLRDLKP 305
G K+ ++ P +G +G G FG Y+A L G + K L+D
Sbjct: 19 GSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--- 75
Query: 306 LITEEFR-KQLLVIADQKHPNLLPLLAYYFSNDEKL------LVYKFAGNGNLFNRIHGG 358
+ F+ ++L ++ H N++ L +++S+ EK LV + ++
Sbjct: 76 ---KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHY 131
Query: 359 KSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVL- 417
+K +P L + R+L Y+H + H ++K N+LLD + VL
Sbjct: 132 SRAKQTLPVIYVK--LYMYQLFRSLAYIH-------SFGICHRDIKPQNLLLDPDTAVLK 182
Query: 418 VSDYGFSSLVAQPIAAQRMIS------YKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
+ D+G + Q + + +S Y++PE + + DVWS GC+L ELL G+
Sbjct: 183 LCDFGSAK---QLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 103/240 (42%), Gaps = 50/240 (20%)
Query: 262 GFKLNDLLKAPAEG--------------LGKGIFGNSYKALL--EGRAPVVVKRLRDLKP 305
G K+ ++ P +G +G G FG Y+A L G + K L+D
Sbjct: 12 GSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--- 68
Query: 306 LITEEFR-KQLLVIADQKHPNLLPLLAYYFSNDEKL------LVYKFAGNGNLFNRIHGG 358
+ F+ ++L ++ H N++ L +++S+ EK LV + ++
Sbjct: 69 ---KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHY 124
Query: 359 KSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVL- 417
+K +P L + R+L Y+H + H ++K N+LLD + VL
Sbjct: 125 SRAKQTLPVIYVK--LYMYQLFRSLAYIH-------SFGICHRDIKPQNLLLDPDTAVLK 175
Query: 418 VSDYGFSSLVAQPIAAQRMIS------YKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
+ D+G + Q + + +S Y++PE + + DVWS GC+L ELL G+
Sbjct: 176 LCDFGSAK---QLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 84/197 (42%), Gaps = 37/197 (18%)
Query: 282 GNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLL 341
GN Y + + VV +L+ ++ + E K++L + P L+ L + N +
Sbjct: 66 GNHYAMKILDKQKVV--KLKQIEHTLNE---KRILQAVN--FPFLVKLEFSFKDNSNLYM 118
Query: 342 VYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
V ++ G +F+ + G+ S+ F A + EYLH D +I+
Sbjct: 119 VMEYVAGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFEYLHSLD-------LIY 164
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSS--------LVAQPIAAQRMISYKSPEYQSSKKISR 452
+LK N+L+D + V+D+GF+ L P A +PE SK ++
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEAL-------APEIILSKGYNK 217
Query: 453 KSDVWSFGCLLLELLTG 469
D W+ G L+ E+ G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 103/240 (42%), Gaps = 50/240 (20%)
Query: 262 GFKLNDLLKAPAEG--------------LGKGIFGNSYKALL--EGRAPVVVKRLRDLKP 305
G K+ ++ P +G +G G FG Y+A L G + K L+D
Sbjct: 4 GSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD--- 60
Query: 306 LITEEFR-KQLLVIADQKHPNLLPLLAYYFSNDEKL------LVYKFAGNGNLFNRIHGG 358
+ F+ ++L ++ H N++ L +++S+ EK LV + ++
Sbjct: 61 ---KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHY 116
Query: 359 KSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVL- 417
+K +P L + R+L Y+H + H ++K N+LLD + VL
Sbjct: 117 SRAKQTLPVIYVK--LYMYQLFRSLAYIH-------SFGICHRDIKPQNLLLDPDTAVLK 167
Query: 418 VSDYGFSSLVAQPIAAQRMIS------YKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
+ D+G + Q + + +S Y++PE + + DVWS GC+L ELL G+
Sbjct: 168 LCDFGSAK---QLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 398 VIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR-----MISYKSPEYQSSKKISR 452
++H ++K NIL+D N+ + + D+G + +++ Q + Y SPE +
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDE 191
Query: 453 KSDVWSFGCLLLELLTGR 470
+D++S G +L E+L G
Sbjct: 192 CTDIYSIGIVLYEMLVGE 209
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 16/135 (11%)
Query: 340 LLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVI 399
L++ + G LF+RI + F R + R + A+++LH + +
Sbjct: 83 LIIMECMEGGELFSRI----QERGDQAFTEREAAEIMRDIGTAIQFLHSHN-------IA 131
Query: 400 HGNLKSTNILLDDNE---MVLVSDYGFSSLVAQPIAAQRMIS--YKSPEYQSSKKISRKS 454
H ++K N+L E ++ ++D+GF+ Q + Y +PE +K +
Sbjct: 132 HRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSC 191
Query: 455 DVWSFGCLLLELLTG 469
D+WS G ++ LL G
Sbjct: 192 DMWSLGVIMYILLCG 206
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 89/210 (42%), Gaps = 39/210 (18%)
Query: 276 LGKGIFGNSYKALLEGRAP---VVVKRLRDLKPLITEEFR-KQLLVIADQKHPNLLPLLA 331
LG+G FG ++ +E + VK++R E FR ++L+ A P ++PL
Sbjct: 82 LGRGSFGEVHR--MEDKQTGFQCAVKKVR------LEVFRAEELMACAGLTSPRIVPLYG 133
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVA-RALEYLHHKD 390
+ + G+L + + +P R L G A LEYLH +
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLV----KEQGCLP---EDRALYYLGQALEGLEYLHSRR 186
Query: 391 KSRTQSAVIHGNLKSTNILLD-DNEMVLVSDYGFSSLVAQPIAAQRMI----------SY 439
++HG++K+ N+LL D + D+G + + QP + + ++
Sbjct: 187 -------ILHGDVKADNVLLSSDGSHAALCDFGHA-VCLQPDGLGKDLLTGDYIPGTETH 238
Query: 440 KSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
+PE + K DVWS C++L +L G
Sbjct: 239 MAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 122/310 (39%), Gaps = 62/310 (20%)
Query: 276 LGKGIFGNSYKALLEG------RAPVVVKRLRDLKPLITEE-FRKQLLVIAD-QKHPNLL 327
LG G FG +A G V VK L+ L E +L V++ H N++
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSR--------------- 372
LL L++ ++ G+L N + + R F C
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLR-----RKRDSFICSKTSPAIMEDDELALDLE 145
Query: 373 --LLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGF------- 423
L + VA+ + +L K+ IH +L + NILL + + D+G
Sbjct: 146 DLLSFSYQVAKGMAFLASKN-------CIHRDLAARNILLTHGRITKICDFGLARDIKND 198
Query: 424 SSLVAQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGA 483
S+ V + A+ + + +PE + + +SDVWS+G L EL S S+P G
Sbjct: 199 SNYVVKG-NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF----SLGSSPY--PGM 251
Query: 484 DLCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSE 543
+ S + ++E + S H ++ + C + P KRP ++V
Sbjct: 252 PVDSKFYKMIKEGFR----------MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL 301
Query: 544 LEIIKVTEST 553
+E +++EST
Sbjct: 302 IE-KQISEST 310
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 16/135 (11%)
Query: 340 LLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVI 399
L++ + G LF+RI + F R + R + A+++LH + +
Sbjct: 102 LIIMECMEGGELFSRI----QERGDQAFTEREAAEIMRDIGTAIQFLHSHN-------IA 150
Query: 400 HGNLKSTNILLDDNE---MVLVSDYGFSSLVAQPIAAQRMIS--YKSPEYQSSKKISRKS 454
H ++K N+L E ++ ++D+GF+ Q + Y +PE +K +
Sbjct: 151 HRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSC 210
Query: 455 DVWSFGCLLLELLTG 469
D+WS G ++ LL G
Sbjct: 211 DMWSLGVIMYILLCG 225
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 21/170 (12%)
Query: 307 ITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRI-HGGKSSKNRI 365
I E +++++ +HPN++ + +V ++A G LF RI + G+ S++
Sbjct: 58 IDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED-- 115
Query: 366 PFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM--VLVSDYGF 423
+R + ++ + Y H V H +LK N LLD + + + +G+
Sbjct: 116 ----EARFFFQQLIS-GVSYCH-------AMQVCHRDLKLENTLLDGSPAPRLKICAFGY 163
Query: 424 SS---LVAQPIAAQRMISYKSPEYQSSKKISRK-SDVWSFGCLLLELLTG 469
S L +QP +Y +PE K+ K +DVWS G L +L G
Sbjct: 164 SKSSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 32/210 (15%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFR-KQLLVIADQKHPNLLPLLAYYF 334
+G G FG Y+A L +V + K L + F+ ++L ++ H N++ L +++
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIK----KVLQGKAFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 335 SNDEKL------LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
S+ EK LV + ++ +K +P L + R+L Y+H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK--LYMYQLFRSLAYIH- 139
Query: 389 KDKSRTQSAVIHGNLKSTNILLDDNEMVL-VSDYGFSSLVAQPIAAQRMISYKSPEYQSS 447
+ H ++K N+LLD + VL + D+G + Q + + +SY Y +
Sbjct: 140 ------SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSYICSRYYRA 190
Query: 448 KKI-------SRKSDVWSFGCLLLELLTGR 470
++ + DVWS GC+L ELL G+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 36/212 (16%)
Query: 276 LGKGIFGNSYKALL--EGRAPVVVKRLRDLKPLITEEFR-KQLLVIADQKHPNLLPLLAY 332
+G G FG Y+A L G + K L+D + F+ ++L ++ H N++ L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 333 YFSNDEKL------LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYL 386
++S+ EK LV + ++ +K +P L + R+L Y+
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK--LYMYQLFRSLAYI 138
Query: 387 HHKDKSRTQSAVIHGNLKSTNILLDDNEMVL-VSDYGFSSLVAQPIAAQRMIS------Y 439
H + H ++K N+LLD + VL + D+G + Q + + +S Y
Sbjct: 139 H-------SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSXICSRYY 188
Query: 440 KSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
++PE + + DVWS GC+L ELL G+
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 36/212 (16%)
Query: 276 LGKGIFGNSYKALL--EGRAPVVVKRLRDLKPLITEEFR-KQLLVIADQKHPNLLPLLAY 332
+G G FG Y+A L G + K L+D + F+ ++L ++ H N++ L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 333 YFSNDEKL------LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYL 386
++S+ EK LV + ++ +K +P L + R+L Y+
Sbjct: 82 FYSSGEKKDVVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK--LYMYQLFRSLAYI 138
Query: 387 HHKDKSRTQSAVIHGNLKSTNILLDDNEMVL-VSDYGFSSLVAQPIAAQRMIS------Y 439
H + H ++K N+LLD + VL + D+G + Q + + +S Y
Sbjct: 139 H-------SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSXICSRYY 188
Query: 440 KSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
++PE + + DVWS GC+L ELL G+
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 32/210 (15%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFR-KQLLVIADQKHPNLLPLLAYYF 334
+G G FG Y+A L +V + K L + F+ ++L ++ H N++ L +++
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIK----KVLQGKAFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 335 SNDEKL------LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
S+ EK LV + ++ +K +P L + R+L Y+H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK--LYMYQLFRSLAYIH- 139
Query: 389 KDKSRTQSAVIHGNLKSTNILLDDNEMVL-VSDYGFSSLVAQPIAAQRMISYKSPEYQSS 447
+ H ++K N+LLD + VL + D+G + Q + + +SY Y +
Sbjct: 140 ------SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSYICSRYYRA 190
Query: 448 KKI-------SRKSDVWSFGCLLLELLTGR 470
++ + DVWS GC+L ELL G+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 12/91 (13%)
Query: 381 RALEYLH-HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS- 438
R L++LH H+ V+H +LK NIL+ + + ++D+G + + + +A ++
Sbjct: 131 RGLDFLHSHR--------VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVT 182
Query: 439 --YKSPEYQSSKKISRKSDVWSFGCLLLELL 467
Y++PE + D+WS GC+ E+
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 36/212 (16%)
Query: 276 LGKGIFGNSYKALL--EGRAPVVVKRLRDLKPLITEEFR-KQLLVIADQKHPNLLPLLAY 332
+G G FG Y+A L G + K L+D + F+ ++L ++ H N++ L +
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCNIVRLRYF 82
Query: 333 YFSNDEKL------LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYL 386
++S+ EK LV + ++ +K +P L + R+L Y+
Sbjct: 83 FYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK--LYMYQLFRSLAYI 139
Query: 387 HHKDKSRTQSAVIHGNLKSTNILLDDNEMVL-VSDYGFSSLVAQPIAAQRMIS------Y 439
H + H ++K N+LLD + VL + D+G + Q + + +S Y
Sbjct: 140 H-------SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSXICSRYY 189
Query: 440 KSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
++PE + + DVWS GC+L ELL G+
Sbjct: 190 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 376 ARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDN--EMVLVSDYGFSSLVAQPIAA 433
A + + L+ LH ++ +IH +LK NILL + V D+G S Q +
Sbjct: 206 AHSILQCLDALH-------KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYT 258
Query: 434 Q-RMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
+ Y++PE + D+WS GC+L ELLTG
Sbjct: 259 XIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 36/212 (16%)
Query: 276 LGKGIFGNSYKALL--EGRAPVVVKRLRDLKPLITEEFR-KQLLVIADQKHPNLLPLLAY 332
+G G FG Y+A L G + K L+D + F+ ++L ++ H N++ L +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 333 YFSNDEKL------LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYL 386
++S+ EK LV + ++ +K +P L + R+L Y+
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVK--LYMYQLFRSLAYI 138
Query: 387 HHKDKSRTQSAVIHGNLKSTNILLDDNEMVL-VSDYGFSSLVAQPIAAQRMIS------Y 439
H + H ++K N+LLD + VL + D+G + Q + + +S Y
Sbjct: 139 H-------SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSXICSRYY 188
Query: 440 KSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
++PE + + DVWS GC+L ELL G+
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 376 ARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDN--EMVLVSDYGFSSLVAQPIAA 433
A + + L+ LH ++ +IH +LK NILL + V D+G S Q +
Sbjct: 206 AHSILQCLDALH-------KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYT 258
Query: 434 Q-RMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
+ Y++PE + D+WS GC+L ELLTG
Sbjct: 259 XIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 101/233 (43%), Gaps = 28/233 (12%)
Query: 253 VFIEDEQPAGFKLNDLLKAPAEGLGKGIFGNSYKA----LLEGRAP--VVVKRLRDLKPL 306
VF+ DE + LL+ LG+G FG Y+ +++G A V VK + + L
Sbjct: 6 VFVPDEWEVSREKITLLRE----LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL 61
Query: 307 ITE-EFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHG----GKSS 361
EF + V+ +++ LL L+V + +G+L + + +++
Sbjct: 62 RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN 121
Query: 362 KNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDY 421
R P + + +A +A + YL+ K +H +L + N ++ + V + D+
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYLNAK-------KFVHRDLAARNCMVAHDFTVKIGDF 174
Query: 422 GFSSLVAQPIAAQR------MISYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
G + + + ++ + + +PE + SD+WSFG +L E+ +
Sbjct: 175 GMTRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 12/91 (13%)
Query: 381 RALEYLH-HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS- 438
R L++LH H+ V+H +LK NIL+ + + ++D+G + + + +A ++
Sbjct: 131 RGLDFLHSHR--------VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVT 182
Query: 439 --YKSPEYQSSKKISRKSDVWSFGCLLLELL 467
Y++PE + D+WS GC+ E+
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 12/91 (13%)
Query: 381 RALEYLH-HKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS- 438
R L++LH H+ V+H +LK NIL+ + + ++D+G + + + +A ++
Sbjct: 131 RGLDFLHSHR--------VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVT 182
Query: 439 --YKSPEYQSSKKISRKSDVWSFGCLLLELL 467
Y++PE + D+WS GC+ E+
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 120/309 (38%), Gaps = 60/309 (19%)
Query: 276 LGKGIFGNSYKALLEG------RAPVVVKRLRDLKPLITEE-FRKQLLVIAD-QKHPNLL 327
LG G FG +A G V VK L+ L E +L V++ H N++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSR--------------- 372
LL L++ ++ G+L N + + R F C
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLR-----RKRDSFICSKTSPAIMEDDELALDLE 168
Query: 373 --LLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP 430
L + VA+ + +L K+ IH +L + NILL + + D+G + +
Sbjct: 169 DLLSFSYQVAKGMAFLASKN-------CIHRDLAARNILLTHGRITKICDFGLARHIKND 221
Query: 431 IA------AQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGAD 484
A+ + + +PE + + +SDVWS+G L EL S S+P G
Sbjct: 222 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF----SLGSSPY--PGMP 275
Query: 485 LCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544
+ S + ++E + S H ++ + C + P KRP ++V +
Sbjct: 276 VDSKFYKMIKEGFR----------MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 325
Query: 545 EIIKVTEST 553
E +++EST
Sbjct: 326 E-KQISEST 333
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 122/310 (39%), Gaps = 62/310 (20%)
Query: 276 LGKGIFGNSYKALLEG------RAPVVVKRLRDLKPLITEE-FRKQLLVIAD-QKHPNLL 327
LG G FG +A G V VK L+ L E +L V++ H N++
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSR--------------- 372
LL L++ ++ G+L N + + R F C
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLR-----RKRDSFICSKTSPAIMEDDELALDLE 161
Query: 373 --LLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGF------- 423
L + VA+ + +L K+ IH +L + NILL + + D+G
Sbjct: 162 DLLSFSYQVAKGMAFLASKN-------CIHRDLAARNILLTHGRITKICDFGLARDIKND 214
Query: 424 SSLVAQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGA 483
S+ V + A+ + + +PE + + +SDVWS+G L EL S S+P G
Sbjct: 215 SNYVVKG-NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF----SLGSSPY--PGM 267
Query: 484 DLCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSE 543
+ S + ++E + S H ++ + C + P KRP ++V
Sbjct: 268 PVDSKFYKMIKEGFR----------MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL 317
Query: 544 LEIIKVTEST 553
+E +++EST
Sbjct: 318 IE-KQISEST 326
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 122/310 (39%), Gaps = 62/310 (20%)
Query: 276 LGKGIFGNSYKALLEG------RAPVVVKRLRDLKPLITEE-FRKQLLVIAD-QKHPNLL 327
LG G FG +A G V VK L+ L E +L V++ H N++
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSR--------------- 372
LL L++ ++ G+L N + + R F C
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLR-----RKRDSFICSKTSPAIMEDDELALDLE 163
Query: 373 --LLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGF------- 423
L + VA+ + +L K+ IH +L + NILL + + D+G
Sbjct: 164 DLLSFSYQVAKGMAFLASKN-------CIHRDLAARNILLTHGRITKICDFGLARDIKND 216
Query: 424 SSLVAQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGA 483
S+ V + A+ + + +PE + + +SDVWS+G L EL S S+P G
Sbjct: 217 SNYVVKG-NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF----SLGSSPY--PGM 269
Query: 484 DLCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSE 543
+ S + ++E + S H ++ + C + P KRP ++V
Sbjct: 270 PVDSKFYKMIKEGFR----------MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL 319
Query: 544 LEIIKVTEST 553
+E +++EST
Sbjct: 320 IE-KQISEST 328
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 101/233 (43%), Gaps = 28/233 (12%)
Query: 253 VFIEDEQPAGFKLNDLLKAPAEGLGKGIFGNSYKA----LLEGRAP--VVVKRLRDLKPL 306
V++ DE + LL+ LG+G FG Y+ +++G A V VK + + L
Sbjct: 6 VYVPDEWEVSREKITLLRE----LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL 61
Query: 307 ITE-EFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHG----GKSS 361
EF + V+ +++ LL L+V + +G+L + + +++
Sbjct: 62 RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN 121
Query: 362 KNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDY 421
R P + + +A +A + YL+ K +H +L + N ++ + V + D+
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYLNAK-------KFVHRDLAARNCMVAHDFTVKIGDF 174
Query: 422 GFSSLVAQPIAAQR------MISYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
G + + + ++ + + +PE + SD+WSFG +L E+ +
Sbjct: 175 GMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 31/208 (14%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRLRDLKPL---------ITEEFRKQLLVIADQKHP- 324
+GKG FG KA + V +K +R+ K I E RKQ D+ +
Sbjct: 105 IGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQ-----DKDNTM 159
Query: 325 NLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALE 384
N++ +L + + + ++ + NL+ I K +P + A + + L+
Sbjct: 160 NVIHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRK----FAHSILQCLD 214
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDN--EMVLVSDYGFSSLVAQPIAAQ-RMISYKS 441
LH ++ +IH +LK NILL + V D+G S Q + + Y++
Sbjct: 215 ALH-------KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRFYRA 267
Query: 442 PEYQSSKKISRKSDVWSFGCLLLELLTG 469
PE + D+WS GC+L ELLTG
Sbjct: 268 PEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 122/310 (39%), Gaps = 62/310 (20%)
Query: 276 LGKGIFGNSYKALLEG------RAPVVVKRLRDLKPLITEE-FRKQLLVIAD-QKHPNLL 327
LG G FG +A G V VK L+ L E +L V++ H N++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSR--------------- 372
LL L++ ++ G+L N + + R F C
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLR-----RKRDSFICSKTSPAIMEDDELALDLE 168
Query: 373 --LLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGF------- 423
L + VA+ + +L K+ IH +L + NILL + + D+G
Sbjct: 169 DLLSFSYQVAKGMAFLASKN-------CIHRDLAARNILLTHGRITKICDFGLARDIKND 221
Query: 424 SSLVAQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGA 483
S+ V + A+ + + +PE + + +SDVWS+G L EL S S+P G
Sbjct: 222 SNYVVKG-NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF----SLGSSPY--PGM 274
Query: 484 DLCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSE 543
+ S + ++E + S H ++ + C + P KRP ++V
Sbjct: 275 PVDSKFYKMIKEGFR----------MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL 324
Query: 544 LEIIKVTEST 553
+E +++EST
Sbjct: 325 IE-KQISEST 333
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 101/233 (43%), Gaps = 28/233 (12%)
Query: 253 VFIEDEQPAGFKLNDLLKAPAEGLGKGIFGNSYKA----LLEGRAP--VVVKRLRDLKPL 306
V++ DE + LL+ LG+G FG Y+ +++G A V VK + + L
Sbjct: 6 VYVPDEWEVSREKITLLRE----LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL 61
Query: 307 ITE-EFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHG----GKSS 361
EF + V+ +++ LL L+V + +G+L + + +++
Sbjct: 62 RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN 121
Query: 362 KNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDY 421
R P + + +A +A + YL+ K +H NL + N ++ + V + D+
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYLNAK-------KFVHRNLAARNCMVAHDFTVKIGDF 174
Query: 422 GFSSLVAQPIAAQR------MISYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
G + + + ++ + + +PE + SD+WSFG +L E+ +
Sbjct: 175 GMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 101/233 (43%), Gaps = 28/233 (12%)
Query: 253 VFIEDEQPAGFKLNDLLKAPAEGLGKGIFGNSYKA----LLEGRAP--VVVKRLRDLKPL 306
V++ DE + LL+ LG+G FG Y+ +++G A V VK + + L
Sbjct: 7 VYVPDEWEVSREKITLLRE----LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL 62
Query: 307 ITE-EFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHG----GKSS 361
EF + V+ +++ LL L+V + +G+L + + +++
Sbjct: 63 RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN 122
Query: 362 KNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDY 421
R P + + +A +A + YL+ K +H NL + N ++ + V + D+
Sbjct: 123 PGRPPPTLQEMIQMAAEIADGMAYLNAK-------KFVHRNLAARNCMVAHDFTVKIGDF 175
Query: 422 GFSSLVAQPIAAQR------MISYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
G + + + ++ + + +PE + SD+WSFG +L E+ +
Sbjct: 176 GMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 381 RALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVL-VSDYGFSSLVAQPIAAQRMIS- 438
R L+Y+H + V+H +LK N+ ++ ++VL + D+G + ++ + + +S
Sbjct: 131 RGLKYIH-------SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSE 183
Query: 439 ------YKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
Y+SP S ++ D+W+ GC+ E+LTG+
Sbjct: 184 GLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 382 ALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA--QPIAAQRMISY 439
LE++H++ V++ +LK NILLD++ V +SD G + + +P A+ Y
Sbjct: 304 GLEHMHNR-------FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGY 356
Query: 440 KSPE-YQSSKKISRKSDVWSFGCLLLELLTG 469
+PE Q +D +S GC+L +LL G
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 382 ALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA--QPIAAQRMISY 439
LE++H++ V++ +LK NILLD++ V +SD G + + +P A+ Y
Sbjct: 303 GLEHMHNR-------FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGY 355
Query: 440 KSPE-YQSSKKISRKSDVWSFGCLLLELLTG 469
+PE Q +D +S GC+L +LL G
Sbjct: 356 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 382 ALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA--QPIAAQRMISY 439
LE++H++ V++ +LK NILLD++ V +SD G + + +P A+ Y
Sbjct: 304 GLEHMHNR-------FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGY 356
Query: 440 KSPE-YQSSKKISRKSDVWSFGCLLLELLTG 469
+PE Q +D +S GC+L +LL G
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 382 ALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA--QPIAAQRMISY 439
LE++H++ V++ +LK NILLD++ V +SD G + + +P A+ Y
Sbjct: 304 GLEHMHNR-------FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGY 356
Query: 440 KSPE-YQSSKKISRKSDVWSFGCLLLELLTG 469
+PE Q +D +S GC+L +LL G
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 87/206 (42%), Gaps = 26/206 (12%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEE------FRKQLLVIADQKHPNLLPL 329
LGKG FG + +G + ++ +I ++ K++L + K P L L
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG-KPPFLTQL 407
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
+ + + D V ++ G+L I G+ F+ + A +A L +L
Sbjct: 408 HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR-------FKEPHAVFYAAEIAIGLFFLQS 460
Query: 389 KDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSL-VAQPIAAQRMIS---YKSPEY 444
K +I+ +LK N++LD + ++D+G + + + Y +PE
Sbjct: 461 K-------GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEI 513
Query: 445 QSSKKISRKSDVWSFGCLLLELLTGR 470
+ + + D W+FG LL E+L G+
Sbjct: 514 IAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 87/206 (42%), Gaps = 26/206 (12%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEE------FRKQLLVIADQKHPNLLPL 329
LGKG FG + +G + ++ +I ++ K++L + K P L L
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG-KPPFLTQL 86
Query: 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHG-GKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
+ + + D V ++ G+L I G+ F+ + A +A L +L
Sbjct: 87 HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR-------FKEPHAVFYAAEIAIGLFFLQS 139
Query: 389 KDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSL-VAQPIAAQRMIS---YKSPEY 444
K +I+ +LK N++LD + ++D+G + + + Y +PE
Sbjct: 140 K-------GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEI 192
Query: 445 QSSKKISRKSDVWSFGCLLLELLTGR 470
+ + + D W+FG LL E+L G+
Sbjct: 193 IAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 95/226 (42%), Gaps = 44/226 (19%)
Query: 274 EGLGKGIFGNSYKALLEGR-APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAY 332
E +GKG +G ++ +G V + RD K E +L +H N+L +A
Sbjct: 43 ECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRE---TELYNTVMLRHENILGFIAS 99
Query: 333 ----YFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
S+ + L+ + G+L++ + S L + +A L +LH
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYLQ-------LTTLDTVSCLRIVLSIASGLAHLHI 152
Query: 389 KD-KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP-----------IAAQRM 436
+ ++ + A+ H +LKS NIL+ N ++D G + + +Q + +R
Sbjct: 153 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR- 211
Query: 437 ISYKSPE----------YQSSKKISRKSDVWSFGCLLLELLTGRIS 472
Y +PE + S K++ D+W+FG +L E+ +S
Sbjct: 212 --YMAPEVLDETIQVDCFDSYKRV----DIWAFGLVLWEVARRMVS 251
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 101/233 (43%), Gaps = 28/233 (12%)
Query: 253 VFIEDEQPAGFKLNDLLKAPAEGLGKGIFGNSYKA----LLEGRAP--VVVKRLRDLKPL 306
VF+ DE + LL+ LG+G FG Y+ +++G A V VK + + L
Sbjct: 6 VFVPDEWEVSREKITLLRE----LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL 61
Query: 307 ITE-EFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHG----GKSS 361
EF + V+ +++ LL L+V + +G+L + + +++
Sbjct: 62 RERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENN 121
Query: 362 KNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDY 421
R P + + +A +A + YL+ K +H +L + N ++ + V + D+
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYLNAK-------KFVHRDLAARNCMVAHDFTVKIGDF 174
Query: 422 GFSSLVAQPIAAQR------MISYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
G + + + ++ + + +PE + SD+WSFG +L E+ +
Sbjct: 175 GMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 109/259 (42%), Gaps = 47/259 (18%)
Query: 249 DRNLVFIEDEQPAGFKLNDLLKAPAEGLGKGIFGNSYKALLEGRAPVVVKRLRDLK---- 304
DR L+ +ED++ LG G FG K + + V ++ LK
Sbjct: 22 DRKLLTLEDKE----------------LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN 65
Query: 305 -PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKN 363
P + +E + V+ +P ++ ++ + +LV + A G L + + K+
Sbjct: 66 DPALKDELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKD 124
Query: 364 RIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGF 423
+ + + + V+ ++YL +S +H +L + N+LL +SD+G
Sbjct: 125 K------NIIELVHQVSMGMKYLE-------ESNFVHRDLAARNVLLVTQHYAKISDFGL 171
Query: 424 SSLV--------AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHS 475
S + AQ + + + +PE + K S KSDVWSFG L+ E +
Sbjct: 172 SKALRADENYYKAQ-THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS---YGQK 227
Query: 476 APQGINGADLCSWVLRAVR 494
+G+ G+++ + + + R
Sbjct: 228 PYRGMKGSEVTAMLEKGER 246
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 109/259 (42%), Gaps = 47/259 (18%)
Query: 249 DRNLVFIEDEQPAGFKLNDLLKAPAEGLGKGIFGNSYKALLEGRAPVVVKRLRDLK---- 304
DR L+ +ED++ LG G FG K + + V ++ LK
Sbjct: 24 DRKLLTLEDKE----------------LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN 67
Query: 305 -PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKN 363
P + +E + V+ +P ++ ++ + +LV + A G L + + K+
Sbjct: 68 DPALKDELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKD 126
Query: 364 RIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGF 423
+ + + + V+ ++YL +S +H +L + N+LL +SD+G
Sbjct: 127 K------NIIELVHQVSMGMKYLE-------ESNFVHRDLAARNVLLVTQHYAKISDFGL 173
Query: 424 SSLV--------AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHS 475
S + AQ + + + +PE + K S KSDVWSFG L+ E +
Sbjct: 174 SKALRADENYYKAQ-THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS---YGQK 229
Query: 476 APQGINGADLCSWVLRAVR 494
+G+ G+++ + + + R
Sbjct: 230 PYRGMKGSEVTAMLEKGER 248
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 109/259 (42%), Gaps = 47/259 (18%)
Query: 249 DRNLVFIEDEQPAGFKLNDLLKAPAEGLGKGIFGNSYKALLEGRAPVVVKRLRDLK---- 304
DR L+ +ED++ LG G FG K + + V ++ LK
Sbjct: 24 DRKLLTLEDKE----------------LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN 67
Query: 305 -PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKN 363
P + +E + V+ +P ++ ++ + +LV + A G L + + K+
Sbjct: 68 DPALKDELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKD 126
Query: 364 RIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGF 423
+ + + + V+ ++YL +S +H +L + N+LL +SD+G
Sbjct: 127 K------NIIELVHQVSMGMKYLE-------ESNFVHRDLAARNVLLVTQHYAKISDFGL 173
Query: 424 SSLV--------AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHS 475
S + AQ + + + +PE + K S KSDVWSFG L+ E +
Sbjct: 174 SKALRADENYYKAQ-THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS---YGQK 229
Query: 476 APQGINGADLCSWVLRAVR 494
+G+ G+++ + + + R
Sbjct: 230 PYRGMKGSEVTAMLEKGER 248
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 107/258 (41%), Gaps = 45/258 (17%)
Query: 249 DRNLVFIEDEQPAGFKLNDLLKAPAEGLGKGIFGNSYKALLEGRAPVVVKRLRDLK---- 304
DR L+ +ED++ LG G FG K + + V ++ LK
Sbjct: 8 DRKLLTLEDKE----------------LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN 51
Query: 305 -PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKN 363
P + +E + V+ +P ++ ++ + +LV + A G L + + K+
Sbjct: 52 DPALKDELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKD 110
Query: 364 RIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGF 423
+ + + + V+ ++YL +S +H +L + N+LL +SD+G
Sbjct: 111 K------NIIELVHQVSMGMKYLE-------ESNFVHRDLAARNVLLVTQHYAKISDFGL 157
Query: 424 SSLV-------AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSA 476
S + + + + +PE + K S KSDVWSFG L+ E +
Sbjct: 158 SKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS---YGQKP 214
Query: 477 PQGINGADLCSWVLRAVR 494
+G+ G+++ + + + R
Sbjct: 215 YRGMKGSEVTAMLEKGER 232
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 95/226 (42%), Gaps = 44/226 (19%)
Query: 274 EGLGKGIFGNSYKALLEGR-APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAY 332
E +GKG +G ++ +G V + RD K E +L +H N+L +A
Sbjct: 14 ECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRE---TELYNTVMLRHENILGFIAS 70
Query: 333 ----YFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
S+ + L+ + G+L++ + S L + +A L +LH
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQ-------LTTLDTVSCLRIVLSIASGLAHLHI 123
Query: 389 KD-KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP-----------IAAQRM 436
+ ++ + A+ H +LKS NIL+ N ++D G + + +Q + +R
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR- 182
Query: 437 ISYKSPE----------YQSSKKISRKSDVWSFGCLLLELLTGRIS 472
Y +PE + S K++ D+W+FG +L E+ +S
Sbjct: 183 --YMAPEVLDETIQVDCFDSYKRV----DIWAFGLVLWEVARRMVS 222
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 94/210 (44%), Gaps = 32/210 (15%)
Query: 276 LGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFR-KQLLVIADQKHPNLLPLLAYYF 334
+G G FG Y+A L +V + K L + F+ ++L ++ H N++ L +++
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIK----KVLQGKAFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 335 SNDEKL------LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
S+ EK LV + ++ +K +P L + R+L Y+H
Sbjct: 84 SSGEKKDEVYLNLVLDYV-PATVYRVARHYSRAKQTLPVIYVK--LYMYQLFRSLAYIH- 139
Query: 389 KDKSRTQSAVIHGNLKSTNILLDDNEMVL-VSDYGFSSLVAQPIAAQRMIS------YKS 441
+ H ++K N+LLD + VL + D+G + Q + + +S Y++
Sbjct: 140 ------SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSXICSRYYRA 190
Query: 442 PEYQ-SSKKISRKSDVWSFGCLLLELLTGR 470
PE + + DVWS GC+L ELL G+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 95/226 (42%), Gaps = 44/226 (19%)
Query: 274 EGLGKGIFGNSYKALLEGR-APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAY 332
E +GKG +G ++ +G V + RD K E +L +H N+L +A
Sbjct: 14 ECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRE---TELYNTVMLRHENILGFIAS 70
Query: 333 ----YFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
S+ + L+ + G+L++ + S L + +A L +LH
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQ-------LTTLDTVSCLRIVLSIASGLAHLHI 123
Query: 389 KD-KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP-----------IAAQRM 436
+ ++ + A+ H +LKS NIL+ N ++D G + + +Q + +R
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR- 182
Query: 437 ISYKSPE----------YQSSKKISRKSDVWSFGCLLLELLTGRIS 472
Y +PE + S K++ D+W+FG +L E+ +S
Sbjct: 183 --YMAPEVLDETIQVDCFDSYKRV----DIWAFGLVLWEVARRMVS 222
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGF-----SSLVAQPIAAQRMISYKSPEYQSSKKI 450
+ +IH +LK +NI++ + + + D+G +S + P R Y++PE
Sbjct: 145 AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGY 202
Query: 451 SRKSDVWSFGCLLLELLTGRI 471
D+WS GC++ E++ G +
Sbjct: 203 KENVDIWSVGCIMGEMIKGGV 223
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGF-----SSLVAQPIAAQRMISYKSPEYQSSKKI 450
+ +IH +LK +NI++ + + + D+G +S + P R Y++PE
Sbjct: 145 AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGY 202
Query: 451 SRKSDVWSFGCLLLELLTGRI 471
D+WS GC++ E++ G +
Sbjct: 203 KENVDIWSVGCIMGEMIKGGV 223
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 107/258 (41%), Gaps = 45/258 (17%)
Query: 249 DRNLVFIEDEQPAGFKLNDLLKAPAEGLGKGIFGNSYKALLEGRAPVVVKRLRDLK---- 304
DR L+ +ED++ LG G FG K + + V ++ LK
Sbjct: 8 DRKLLTLEDKE----------------LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN 51
Query: 305 -PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKN 363
P + +E + V+ +P ++ ++ + +LV + A G L + + K+
Sbjct: 52 DPALKDELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKD 110
Query: 364 RIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGF 423
+ + + + V+ ++YL +S +H +L + N+LL +SD+G
Sbjct: 111 K------NIIELVHQVSMGMKYLE-------ESNFVHRDLAARNVLLVTQHYAKISDFGL 157
Query: 424 SSLV-------AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSA 476
S + + + + +PE + K S KSDVWSFG L+ E +
Sbjct: 158 SKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS---YGQKP 214
Query: 477 PQGINGADLCSWVLRAVR 494
+G+ G+++ + + + R
Sbjct: 215 YRGMKGSEVTAMLEKGER 232
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGF-----SSLVAQPIAAQRMISYKSPEYQSSKKI 450
+ +IH +LK +NI++ + + + D+G +S + P R Y++PE
Sbjct: 145 AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGY 202
Query: 451 SRKSDVWSFGCLLLELLTGRI 471
D+WS GC++ E++ G +
Sbjct: 203 KENVDIWSVGCIMGEMIKGGV 223
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 116/287 (40%), Gaps = 41/287 (14%)
Query: 276 LGKGIFGNSYKALLEG------RAPVVVKRLRDLKPLITE-EFRKQLLVIADQKHPNLLP 328
LG+G FG Y+ + +G V +K + + + EF + V+ + +++
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 329 LLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRL----LVARGVARALE 384
LL L++ + G+L + + + P L +A +A +
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM------IS 438
YL+ + +H +L + N ++ ++ V + D+G + + + ++ +
Sbjct: 138 YLN-------ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 190
Query: 439 YKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWT 498
+ SPE + SDVWSFG +L E+ T QG++ VLR V E
Sbjct: 191 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQ----VLRFVMEGGL 243
Query: 499 AEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
+ D+ + LL++ C +P+ RP E++S ++
Sbjct: 244 LDKPDNCPDM----------LLELMRMCWQYNPKMRPSFLEIISSIK 280
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 107/258 (41%), Gaps = 45/258 (17%)
Query: 249 DRNLVFIEDEQPAGFKLNDLLKAPAEGLGKGIFGNSYKALLEGRAPVVVKRLRDLK---- 304
DR L+ +ED++ LG G FG K + + V ++ LK
Sbjct: 4 DRKLLTLEDKE----------------LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN 47
Query: 305 -PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKN 363
P + +E + V+ +P ++ ++ + +LV + A G L + + K+
Sbjct: 48 DPALKDELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKD 106
Query: 364 RIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGF 423
+ + + + V+ ++YL +S +H +L + N+LL +SD+G
Sbjct: 107 K------NIIELVHQVSMGMKYLE-------ESNFVHRDLAARNVLLVTQHYAKISDFGL 153
Query: 424 SSLV-------AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSA 476
S + + + + +PE + K S KSDVWSFG L+ E +
Sbjct: 154 SKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS---YGQKP 210
Query: 477 PQGINGADLCSWVLRAVR 494
+G+ G+++ + + + R
Sbjct: 211 YRGMKGSEVTAMLEKGER 228
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 32/166 (19%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVK--RLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
E +G+G +G YK L+ R PV VK + + I E K + + +H N+ A
Sbjct: 19 ELIGRGRYGAVYKGSLDER-PVAVKVFSFANRQNFINE---KNIYRVPLMEHDNI----A 70
Query: 332 YYFSNDEK---------LLVYKFAGNGNL--FNRIHGGKSSKNRIPFRCRSRLLVARGVA 380
+ DE+ LLV ++ NG+L + +H + CR +A V
Sbjct: 71 RFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSS-----CR----LAHSVT 121
Query: 381 RALEYLHHK--DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS 424
R L YLH + + A+ H +L S N+L+ ++ ++SD+G S
Sbjct: 122 RGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS 167
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 107/258 (41%), Gaps = 45/258 (17%)
Query: 249 DRNLVFIEDEQPAGFKLNDLLKAPAEGLGKGIFGNSYKALLEGRAPVVVKRLRDLK---- 304
DR L+ +ED++ LG G FG K + + V ++ LK
Sbjct: 2 DRKLLTLEDKE----------------LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN 45
Query: 305 -PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKN 363
P + +E + V+ +P ++ ++ + +LV + A G L + + K+
Sbjct: 46 DPALKDELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKD 104
Query: 364 RIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGF 423
+ + + + V+ ++YL +S +H +L + N+LL +SD+G
Sbjct: 105 K------NIIELVHQVSMGMKYLE-------ESNFVHRDLAARNVLLVTQHYAKISDFGL 151
Query: 424 SSLV-------AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSA 476
S + + + + +PE + K S KSDVWSFG L+ E +
Sbjct: 152 SKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS---YGQKP 208
Query: 477 PQGINGADLCSWVLRAVR 494
+G+ G+++ + + + R
Sbjct: 209 YRGMKGSEVTAMLEKGER 226
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 107/258 (41%), Gaps = 45/258 (17%)
Query: 249 DRNLVFIEDEQPAGFKLNDLLKAPAEGLGKGIFGNSYKALLEGRAPVVVKRLRDLK---- 304
DR L+ +ED++ LG G FG K + + V ++ LK
Sbjct: 14 DRKLLTLEDKE----------------LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN 57
Query: 305 -PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKN 363
P + +E + V+ +P ++ ++ + +LV + A G L + + K+
Sbjct: 58 DPALKDELLAEANVMQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKD 116
Query: 364 RIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGF 423
+ + + + V+ ++YL +S +H +L + N+LL +SD+G
Sbjct: 117 K------NIIELVHQVSMGMKYLE-------ESNFVHRDLAARNVLLVTQHYAKISDFGL 163
Query: 424 SSLV-------AQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSA 476
S + + + + +PE + K S KSDVWSFG L+ E +
Sbjct: 164 SKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS---YGQKP 220
Query: 477 PQGINGADLCSWVLRAVR 494
+G+ G+++ + + + R
Sbjct: 221 YRGMKGSEVTAMLEKGER 238
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 94/211 (44%), Gaps = 27/211 (12%)
Query: 273 AEGLGKGIFGNSYKALLEGR----APVVVKRLR---DLKPLITEEFRKQLLVIADQKHPN 325
E LG G F K +G A +K+ R + + EE +++ ++ + +HPN
Sbjct: 17 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPN 76
Query: 326 LLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
++ L + + + +L+ + G LF+ + + K + ++ L + + + Y
Sbjct: 77 IITLHDIFENKTDVVLILELVSGGELFDFL----AEKESLTEDEATQFL--KQILDGVHY 130
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDD----NEMVLVSDYGFSSLVAQPIAAQRMIS--- 438
LH K + H +LK NI+L D N + + D+G + + + +
Sbjct: 131 LHSK-------RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPE 183
Query: 439 YKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
+ +PE + + + ++D+WS G + LL+G
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 19/135 (14%)
Query: 341 LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
L+ +F +G+L + KN+ + +L A + + ++YL + +H
Sbjct: 102 LIMEFLPSGSLKEYL-----PKNKNKINLKQQLKYAVQICKGMDYLGSR-------QYVH 149
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-------ISYKSPEYQSSKKISRK 453
+L + N+L++ V + D+G + + + + + +PE K
Sbjct: 150 RDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIA 209
Query: 454 SDVWSFGCLLLELLT 468
SDVWSFG L ELLT
Sbjct: 210 SDVWSFGVTLHELLT 224
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 395 QSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV--------AQPIAAQRMISYKSPEYQS 446
+S +H +L + N+LL +SD+G S + AQ + + + +PE +
Sbjct: 487 ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ-THGKWPVKWYAPECIN 545
Query: 447 SKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVR 494
K S KSDVWSFG L+ E + +G+ G+++ + + + R
Sbjct: 546 YYKFSSKSDVWSFGVLMWEAFS---YGQKPYRGMKGSEVTAMLEKGER 590
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 19/135 (14%)
Query: 341 LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400
L+ +F +G+L + KN+ + +L A + + ++YL + +H
Sbjct: 90 LIMEFLPSGSLKEYL-----PKNKNKINLKQQLKYAVQICKGMDYLGSR-------QYVH 137
Query: 401 GNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM-------ISYKSPEYQSSKKISRK 453
+L + N+L++ V + D+G + + + + + +PE K
Sbjct: 138 RDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIA 197
Query: 454 SDVWSFGCLLLELLT 468
SDVWSFG L ELLT
Sbjct: 198 SDVWSFGVTLHELLT 212
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 395 QSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV--------AQPIAAQRMISYKSPEYQS 446
+S +H +L + N+LL +SD+G S + AQ + + + +PE +
Sbjct: 488 ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ-THGKWPVKWYAPECIN 546
Query: 447 SKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVR 494
K S KSDVWSFG L+ E + +G+ G+++ + + + R
Sbjct: 547 YYKFSSKSDVWSFGVLMWEAFS---YGQKPYRGMKGSEVTAMLEKGER 591
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 81/189 (42%), Gaps = 42/189 (22%)
Query: 323 HPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRL------LVA 376
HPN++P A + +++E +V F G S+K+ I + +
Sbjct: 85 HPNIVPYRATFIADNELWVVTSFMAYG----------SAKDLICTHFMDGMNELAIAYIL 134
Query: 377 RGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVS---------DYGFSSLV 427
+GV +AL+Y+HH +H ++K+++IL+ + V +S +G V
Sbjct: 135 QGVLKALDYIHHM-------GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRV 187
Query: 428 AQ--PIAAQRMISYKSPEY--QSSKKISRKSDVWSFGCLLLELLTGRISTHSAP------ 477
P + +++ + SPE Q+ + KSD++S G EL G + P
Sbjct: 188 VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLL 247
Query: 478 QGINGADLC 486
+ +NG C
Sbjct: 248 EKLNGTVPC 256
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 94/211 (44%), Gaps = 27/211 (12%)
Query: 273 AEGLGKGIFGNSYKALLEGR----APVVVKRLR---DLKPLITEEFRKQLLVIADQKHPN 325
E LG G F K +G A +K+ R + + EE +++ ++ + +HPN
Sbjct: 10 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPN 69
Query: 326 LLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
++ L + + + +L+ + G LF+ + + K + ++ L + + + Y
Sbjct: 70 IITLHDIFENKTDVVLILELVSGGELFDFL----AEKESLTEDEATQFL--KQILDGVHY 123
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDD----NEMVLVSDYGFSSLVAQPIAAQRMIS--- 438
LH K + H +LK NI+L D N + + D+G + + + +
Sbjct: 124 LHSK-------RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPE 176
Query: 439 YKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
+ +PE + + + ++D+WS G + LL+G
Sbjct: 177 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 94/211 (44%), Gaps = 27/211 (12%)
Query: 273 AEGLGKGIFGNSYKALLEGR----APVVVKRLR---DLKPLITEEFRKQLLVIADQKHPN 325
E LG G F K +G A +K+ R + + EE +++ ++ + +HPN
Sbjct: 31 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPN 90
Query: 326 LLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
++ L + + + +L+ + G LF+ + + K + ++ L + + + Y
Sbjct: 91 IITLHDIFENKTDVVLILELVSGGELFDFL----AEKESLTEDEATQFL--KQILDGVHY 144
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDD----NEMVLVSDYGFSSLVAQPIAAQRMIS--- 438
LH K + H +LK NI+L D N + + D+G + + + +
Sbjct: 145 LHSK-------RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPE 197
Query: 439 YKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
+ +PE + + + ++D+WS G + LL+G
Sbjct: 198 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 81/189 (42%), Gaps = 42/189 (22%)
Query: 323 HPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRL------LVA 376
HPN++P A + +++E +V F G S+K+ I + +
Sbjct: 69 HPNIVPYRATFIADNELWVVTSFMAYG----------SAKDLICTHFMDGMNELAIAYIL 118
Query: 377 RGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVS---------DYGFSSLV 427
+GV +AL+Y+HH +H ++K+++IL+ + V +S +G V
Sbjct: 119 QGVLKALDYIHHM-------GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRV 171
Query: 428 AQ--PIAAQRMISYKSPEY--QSSKKISRKSDVWSFGCLLLELLTGRISTHSAP------ 477
P + +++ + SPE Q+ + KSD++S G EL G + P
Sbjct: 172 VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLL 231
Query: 478 QGINGADLC 486
+ +NG C
Sbjct: 232 EKLNGTVPC 240
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 91/207 (43%), Gaps = 27/207 (13%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITE--EFRKQLLVIADQKHPNLLPLLA 331
E +G G F A +V ++ D L ++ + ++ + + +H ++ L
Sbjct: 16 ETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYH 75
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
+ ++ +V ++ G LF+ I S++R+ +R+ V R + A+ Y+H
Sbjct: 76 VLETANKIFMVLEYCPGGELFDYI----ISQDRLSEE-ETRV-VFRQIVSAVAYVH---- 125
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM--------ISYKSPE 443
H +LK N+L D+ + + D+G L A+P + ++Y +PE
Sbjct: 126 ---SQGYAHRDLKPENLLFDEYHKLKLIDFG---LCAKPKGNKDYHLQTCCGSLAYAAPE 179
Query: 444 Y-QSSKKISRKSDVWSFGCLLLELLTG 469
Q + ++DVWS G LL L+ G
Sbjct: 180 LIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGF-----SSLVAQPIAAQRMISYKSPEYQSSKKI 450
+ +IH +LK +NI++ + + + D+G +S + P R Y++PE
Sbjct: 146 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGY 203
Query: 451 SRKSDVWSFGCLLLELLTGRI 471
D+WS GC++ E++ G +
Sbjct: 204 KENVDIWSVGCIMGEMIKGGV 224
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 42/222 (18%)
Query: 271 APAEGLGKGIFGNSYKALLEGRAPVVVKRL--RDLKPLI--TEEFRKQLLVIADQKHPNL 326
A E +GKG +G ++ L G + V VK RD + TE + LL +H N+
Sbjct: 11 ALVECVGKGRYGEVWRGLWHGES-VAVKIFSSRDEQSWFRETEIYNTVLL-----RHDNI 64
Query: 327 LPLLAYYF----SNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARA 382
L +A S+ + L+ + +G+L++ + R L +A A
Sbjct: 65 LGFIASDMTSRNSSTQLWLITHYHEHGSLYDFL-------QRQTLEPHLALRLAVSAACG 117
Query: 383 LEYLHHKD-KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP----------- 430
L +LH + ++ + A+ H + KS N+L+ N ++D G + + +Q
Sbjct: 118 LAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPR 177
Query: 431 IAAQRMISYKSPEYQSSK------KISRKSDVWSFGCLLLEL 466
+ +R Y +PE + + + +D+W+FG +L E+
Sbjct: 178 VGTKR---YMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGF-----SSLVAQPIAAQRMISYKSPEYQSSKKI 450
+ +IH +LK +NI++ + + + D+G +S + P R Y++PE
Sbjct: 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGY 202
Query: 451 SRKSDVWSFGCLLLELLTGRI 471
D+WS GC++ E++ G +
Sbjct: 203 KENVDIWSVGCIMGEMIKGGV 223
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 30/213 (14%)
Query: 276 LGKGIFGNSYKALLEG-RAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYF 334
+G+G +G A+ +G R K++ + F++++ ++ HPN++ L +
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE 76
Query: 335 SNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRT 394
N + LV + G LF R+ R+ FR + + V A+ Y H +
Sbjct: 77 DNTDIYLVMELCTGGELFERV-----VHKRV-FRESDAARIMKDVLSAVAYCHKLN---- 126
Query: 395 QSAVIHGNLKSTNILL----DDNEMVLVSDYGFSSLVAQPIAAQRMISYK--SPEYQSSK 448
V H +LK N L D+ + L+ D+G +A +M+ K +P Y S +
Sbjct: 127 ---VAHRDLKPENFLFLTDSPDSPLKLI-DFG----LAARFKPGKMMRTKVGTPYYVSPQ 178
Query: 449 KI----SRKSDVWSFGCLLLELLTGRISTHSAP 477
+ + D WS G ++ LL G SAP
Sbjct: 179 VLEGLYGPECDEWSAGVMMYVLLCG-YPPFSAP 210
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGF-----SSLVAQPIAAQRMISYKSPEYQSSKKI 450
+ +IH +LK +NI++ + + + D+G +S + P R Y++PE
Sbjct: 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGY 202
Query: 451 SRKSDVWSFGCLLLELLTGRI 471
D+WS GC++ E++ G +
Sbjct: 203 KENVDIWSVGCIMGEMIKGGV 223
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 88/211 (41%), Gaps = 27/211 (12%)
Query: 273 AEGLGKGIFGNSYKAL-----LEGRAPVVVKRLR--DLKPLITEEFRKQLLVIADQKHPN 325
E LG G F K LE A + KR + + EE +++ ++ HPN
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPN 76
Query: 326 LLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
++ L Y + + +L+ + G LF+ + +S + + + Y
Sbjct: 77 IITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE------EEATSFIKQILDGVNY 130
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEM----VLVSDYGFSSLVAQPIAAQRMI---S 438
LH K + H +LK NI+L D + + + D+G + + + + +
Sbjct: 131 LHTK-------KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE 183
Query: 439 YKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
+ +PE + + + ++D+WS G + LL+G
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGF-----SSLVAQPIAAQRMISYKSPEYQSSKKI 450
+ +IH +LK +NI++ + + + D+G +S + P R Y++PE
Sbjct: 138 AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGY 195
Query: 451 SRKSDVWSFGCLLLELLTGRI 471
D+WS GC++ E++ +I
Sbjct: 196 KENVDIWSVGCIMGEMVRHKI 216
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 397 AVIHGNLKSTNILL--DDNEMVLVSDYGFSSLVAQPIAAQRMIS--YKSPEYQSSKKISR 452
++IH +LK NILL + + D+G S + Q I Q + S Y+SPE
Sbjct: 160 SIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QXIQSRFYRSPEVLLGMPYDL 218
Query: 453 KSDVWSFGCLLLELLTG 469
D+WS GC+L+E+ TG
Sbjct: 219 AIDMWSLGCILVEMHTG 235
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 397 AVIHGNLKSTNILL--DDNEMVLVSDYGFSSLVAQPIAAQRMIS--YKSPEYQSSKKISR 452
++IH +LK NILL + + D+G S + Q I Q + S Y+SPE
Sbjct: 179 SIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-QXIQSRFYRSPEVLLGMPYDL 237
Query: 453 KSDVWSFGCLLLELLTG 469
D+WS GC+L+E+ TG
Sbjct: 238 AIDMWSLGCILVEMHTG 254
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGF-----SSLVAQPIAAQRMISYKSPEYQSSKKI 450
+ +IH +LK +NI++ + + + D+G +S + P R Y++PE
Sbjct: 147 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRY--YRAPEVILGMGY 204
Query: 451 SRKSDVWSFGCLLLELLTGRI 471
D+WS GC++ E++ G +
Sbjct: 205 KENVDIWSVGCIMGEMIKGGV 225
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 38/224 (16%)
Query: 276 LGKGIFGNSYKALLEGRAP------VVVKRLRDLKPLITEEFRKQLLVIADQ--KHPNLL 327
LG G FG +A G V VK L+ +E L I +H N++
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIH-----------------GGKSSKNRIPFRCR 370
LL L++ ++ G+L N + G ++ P R
Sbjct: 99 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 371 SRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP 430
L + VA+ + +L K+ IH ++ + N+LL + + + D+G + +
Sbjct: 159 DLLHFSSQVAQGMAFLASKN-------CIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 211
Query: 431 IA------AQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
A+ + + +PE + +SDVWS+G LL E+ +
Sbjct: 212 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 30/213 (14%)
Query: 276 LGKGIFGNSYKALLEG-RAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYF 334
+G+G +G A+ +G R K++ + F++++ ++ HPN++ L +
Sbjct: 34 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE 93
Query: 335 SNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRT 394
N + LV + G LF R+ R+ FR + + V A+ Y H +
Sbjct: 94 DNTDIYLVMELCTGGELFERV-----VHKRV-FRESDAARIMKDVLSAVAYCHKLN---- 143
Query: 395 QSAVIHGNLKSTNILL----DDNEMVLVSDYGFSSLVAQPIAAQRMISYK--SPEYQSSK 448
V H +LK N L D+ + L+ D+G +A +M+ K +P Y S +
Sbjct: 144 ---VAHRDLKPENFLFLTDSPDSPLKLI-DFG----LAARFKPGKMMRTKVGTPYYVSPQ 195
Query: 449 KI----SRKSDVWSFGCLLLELLTGRISTHSAP 477
+ + D WS G ++ LL G SAP
Sbjct: 196 VLEGLYGPECDEWSAGVMMYVLLCG-YPPFSAP 227
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGF-----SSLVAQPIAAQRMISYKSPEYQSSKKI 450
+ +IH +LK +NI++ + + + D+G +S + P R Y++PE
Sbjct: 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGY 202
Query: 451 SRKSDVWSFGCLLLELLTGRI 471
D+WS GC++ E++ G +
Sbjct: 203 KENVDIWSVGCIMGEMIKGGV 223
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGF-----SSLVAQPIAAQRMISYKSPEYQSSKKI 450
+ +IH +LK +NI++ + + + D+G +S + P R Y++PE
Sbjct: 145 AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGY 202
Query: 451 SRKSDVWSFGCLLLELLTGRI 471
D+WS GC++ E++ +I
Sbjct: 203 KENVDIWSVGCIMGEMVRHKI 223
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGF-----SSLVAQPIAAQRMISYKSPEYQSSKKI 450
+ +IH +LK +NI++ + + + D+G +S + P R Y++PE
Sbjct: 145 AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGY 202
Query: 451 SRKSDVWSFGCLLLELLTGRI 471
D+WS GC++ E++ +I
Sbjct: 203 KENVDIWSVGCIMGEMVRHKI 223
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGF-----SSLVAQPIAAQRMISYKSPEYQSSKKI 450
+ +IH +LK +NI++ + + + D+G +S + P R Y++PE
Sbjct: 145 AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGY 202
Query: 451 SRKSDVWSFGCLLLELLTGRI 471
D+WS GC++ E++ +I
Sbjct: 203 KENVDIWSVGCIMGEMVRHKI 223
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 397 AVIHGNLKSTNILL--DDNEMVLVSDYGFSSLVAQPIAAQRMIS--YKSPEYQSSKKISR 452
++IH +LK NILL + + D+G S + Q I Q + S Y+SPE
Sbjct: 179 SIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIY-QXIQSRFYRSPEVLLGMPYDL 237
Query: 453 KSDVWSFGCLLLELLTG 469
D+WS GC+L+E+ TG
Sbjct: 238 AIDMWSLGCILVEMHTG 254
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGF-----SSLVAQPIAAQRMISYKSPEYQSSKKI 450
+ +IH +LK +NI++ + + + D+G +S + P R Y++PE
Sbjct: 145 AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGY 202
Query: 451 SRKSDVWSFGCLLLELLTGRI 471
D+WS GC++ E++ +I
Sbjct: 203 KENVDIWSVGCIMGEMVRHKI 223
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 23/114 (20%)
Query: 43 ADIPELIVINFKNNIISGNFMNFSSNHK-LKDIDLSGNKFYGEIXXXXXXXXXXXXXXXQ 101
+P L ++N +N ISG+ + + + L +DLS NK G I
Sbjct: 650 GSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRI---------------- 693
Query: 102 NNNLTGPVPEFNQSSLKVFNVSNNNLSGSIPKTQTLQLFRSYSYSNNPYLCGPP 155
P + L ++SNNNLSG IP+ + F + NNP LCG P
Sbjct: 694 ------PQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP 741
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 21/130 (16%)
Query: 18 INSAHVTGIVLEDMRLNGEIKSDAFA--------DIPELIVINFKNNIISGNFMNFSSN- 68
I+ A+V G VL D GE+K A + D+ + + F + +S N NFS+
Sbjct: 160 ISGANVVGWVLSDGC--GELKHLAISGNKISGDVDVSRCVNLEFLD--VSSN--NFSTGI 213
Query: 69 ------HKLKDIDLSGNKFYGEIXXXXXXXXXXXXXXXQNNNLTGPVPEFNQSSLKVFNV 122
L+ +D+SGNK G+ +N GP+P SL+ ++
Sbjct: 214 PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSL 273
Query: 123 SNNNLSGSIP 132
+ N +G IP
Sbjct: 274 AENKFTGEIP 283
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 26 IVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNF-MNFSSNHKLKDIDLSGNKFYGE 84
+ L++ G+I ++ EL+ ++ N +SG + S KL+D+ L N GE
Sbjct: 396 LYLQNNGFTGKIPP-TLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGE 454
Query: 85 IXXXXXXXXXXXXXXXQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPK 133
I N+LTG +P N ++L ++SNN L+G IPK
Sbjct: 455 IPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPK 505
Score = 35.4 bits (80), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 71 LKDIDLSGNKFYGEIXXXXXXXXXXXXXXXQNNNLTGPVPE---FNQSSLKVFNVSNNNL 127
L +DLSGN FYG + +NN +G +P LKV ++S N
Sbjct: 293 LTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEF 352
Query: 128 SGSIPKTQT 136
SG +P++ T
Sbjct: 353 SGELPESLT 361
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 23/114 (20%)
Query: 43 ADIPELIVINFKNNIISGNFMNFSSNHK-LKDIDLSGNKFYGEIXXXXXXXXXXXXXXXQ 101
+P L ++N +N ISG+ + + + L +DLS NK G I
Sbjct: 653 GSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRI---------------- 696
Query: 102 NNNLTGPVPEFNQSSLKVFNVSNNNLSGSIPKTQTLQLFRSYSYSNNPYLCGPP 155
P + L ++SNNNLSG IP+ + F + NNP LCG P
Sbjct: 697 ------PQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP 744
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 21/130 (16%)
Query: 18 INSAHVTGIVLEDMRLNGEIKSDAFA--------DIPELIVINFKNNIISGNFMNFSSN- 68
I+ A+V G VL D GE+K A + D+ + + F + +S N NFS+
Sbjct: 163 ISGANVVGWVLSDGC--GELKHLAISGNKISGDVDVSRCVNLEFLD--VSSN--NFSTGI 216
Query: 69 ------HKLKDIDLSGNKFYGEIXXXXXXXXXXXXXXXQNNNLTGPVPEFNQSSLKVFNV 122
L+ +D+SGNK G+ +N GP+P SL+ ++
Sbjct: 217 PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSL 276
Query: 123 SNNNLSGSIP 132
+ N +G IP
Sbjct: 277 AENKFTGEIP 286
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 26 IVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNF-MNFSSNHKLKDIDLSGNKFYGE 84
+ L++ G+I ++ EL+ ++ N +SG + S KL+D+ L N GE
Sbjct: 399 LYLQNNGFTGKIPP-TLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGE 457
Query: 85 IXXXXXXXXXXXXXXXQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPK 133
I N+LTG +P N ++L ++SNN L+G IPK
Sbjct: 458 IPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPK 508
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 71 LKDIDLSGNKFYGEIXXXXXXXXXXXXXXXQNNNLTGPVPE---FNQSSLKVFNVSNNNL 127
L +DLSGN FYG + +NN +G +P LKV ++S N
Sbjct: 296 LTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEF 355
Query: 128 SGSIPKTQT 136
SG +P++ T
Sbjct: 356 SGELPESLT 364
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/287 (19%), Positives = 117/287 (40%), Gaps = 41/287 (14%)
Query: 276 LGKGIFGNSYKALLEG------RAPVVVKRLRDLKPLITE-EFRKQLLVIADQKHPNLLP 328
LG+G FG Y+ + +G V +K + + + EF + V+ + +++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 329 LLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCR---SRLLVARG-VARALE 384
LL L++ + G+L + + + P S+++ G +A +
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM------IS 438
YL+ + +H +L + N ++ ++ V + D+G + + + ++ +
Sbjct: 147 YLN-------ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 199
Query: 439 YKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWT 498
+ SPE + SDVWSFG +L E+ T QG++ VLR V E
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQ----VLRFVMEGGL 252
Query: 499 AEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
+ D+ + L ++ C +P+ RP E++S ++
Sbjct: 253 LDKPDNCPDM----------LFELMRMCWQYNPKMRPSFLEIISSIK 289
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 115/284 (40%), Gaps = 58/284 (20%)
Query: 276 LGKGIFGNSYKA-LLEGRAPVVVK-----RLRDLKPL---ITEEFRKQLL--VIADQKHP 324
LGKG FG + L R V +K R+ PL +T LL V A HP
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 325 NLLPLLAYYFSNDEKLLVYKFAGNG-NLFNRIHGGKSSKNRIPFRCRSRLLVARGVARAL 383
++ LL ++ + + +LV + +LF+ I K P RC +VA A+
Sbjct: 99 GVIRLLDWFETQEGFMLVLERPLPAQDLFDYITE-KGPLGEGPSRCFFGQVVA-----AI 152
Query: 384 EYLHHKDKSRTQSAVIHGNLKSTNILLD-DNEMVLVSDYGFSSLVA-QPIA---AQRMIS 438
++ H + V+H ++K NIL+D + D+G +L+ +P R+
Sbjct: 153 QHCHSR-------GVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRV-- 203
Query: 439 YKSPEYQSSKKI-SRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEW 497
Y PE+ S + + + VWS G LL +++ G I E
Sbjct: 204 YSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPF----------------------ER 241
Query: 498 TAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVV 541
EI ++E+ + L++ +C P RP + E++
Sbjct: 242 DQEILEAELHFPAHVSPDCCALIR---RCLAPKPSSRPSLEEIL 282
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 6/135 (4%)
Query: 24 TGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNF-MNFSSNHKLKDIDLSGNKFY 82
T + + RL G+I FA++ L ++ N++ G+ + F S+ + I L+ N
Sbjct: 177 TSMTISRNRLTGKIPP-TFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLA 234
Query: 83 GEIXXXXXXXXXXXXXXXQNNNLTGPVPE--FNQSSLKVFNVSNNNLSGSIPKTQTLQLF 140
++ +NN + G +P+ L NVS NNL G IP+ LQ F
Sbjct: 235 FDLGKVGLSKNLNGLDL-RNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRF 293
Query: 141 RSYSYSNNPYLCGPP 155
+Y+NN LCG P
Sbjct: 294 DVSAYANNKCLCGSP 308
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 82/216 (37%), Gaps = 43/216 (19%)
Query: 274 EGLGKGIF-----------GNSYKALLEGRAPVVVKRL--RDLKPLITEEFRKQLLVIAD 320
E LGKG F G Y A++ + K+L RD + L E +LL
Sbjct: 17 EELGKGAFSVVRRCVKVLAGQEYAAMI-----INTKKLSARDHQKLEREARICRLL---- 67
Query: 321 QKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVA 380
KHPN++ L L++ G LF I + C ++L
Sbjct: 68 -KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQIL------ 120
Query: 381 RALEYLHHKDKSRTQSAVIHGNLKSTNILLDD---NEMVLVSDYGFSSLVAQPIAAQRMI 437
A+ + H Q V+H NLK N+LL V ++D+G + V A
Sbjct: 121 EAVLHCH-------QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGF 173
Query: 438 S----YKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
+ Y SPE + D+W+ G +L LL G
Sbjct: 174 AGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGF-----SSLVAQPIAAQRMISYKSPEYQSSKKI 450
+ +IH +LK +NI++ + + + D+G ++ + P R Y++PE
Sbjct: 143 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRY--YRAPEVILGMGY 200
Query: 451 SRKSDVWSFGCLLLELLTGRI 471
D+WS GC++ EL+ G +
Sbjct: 201 KENVDIWSVGCIMGELVKGSV 221
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGF-----SSLVAQPIAAQRMISYKSPEYQSSKKI 450
+ +IH +LK +NI++ + + + D+G +S + P R Y++PE
Sbjct: 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRY--YRAPEVILGMGY 202
Query: 451 SRKSDVWSFGCLLLELLTGRI 471
D+WS GC++ E++ G +
Sbjct: 203 KENVDIWSVGCIMGEMIKGGV 223
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGF-----SSLVAQPIAAQRMISYKSPEYQSSKKI 450
+ +IH +LK +NI++ + + + D+G +S + +P R Y++PE
Sbjct: 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY--YRAPEVILGMGY 202
Query: 451 SRKSDVWSFGCLLLELLTGRI 471
D+WS GC++ E++ +I
Sbjct: 203 KENVDIWSVGCIMGEMVCHKI 223
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 95/222 (42%), Gaps = 40/222 (18%)
Query: 324 PNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIH---GGKSSKNRIPFRCRSRLLVARGVA 380
P ++ L Y + E +L+ ++A G +F+ S+N + + + + +
Sbjct: 89 PRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDV-------IRLIKQIL 141
Query: 381 RALEYLHHKDKSRTQSAVIHGNLKSTNILLDD----NEMVLVSDYGFSSLVAQPIAAQRM 436
+ YLH Q+ ++H +LK NILL ++ +V D+G S + + +
Sbjct: 142 EGVYYLH-------QNNIVHLDLKPQNILLSSIYPLGDIKIV-DFGMSRKIGHACELREI 193
Query: 437 IS---YKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493
+ Y +PE + I+ +D+W+ G + LL TH++P + V
Sbjct: 194 MGTPEYLAPEILNYDPITTATDMWNIGIIAYMLL-----THTSPFVGEDNQETYLNISQV 248
Query: 494 REEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRP 535
+++ E F SV + A + LL K+PEKRP
Sbjct: 249 NVDYSEETFS---SVSQLATDFIQSLLV-------KNPEKRP 280
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 23/139 (16%)
Query: 340 LLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVI 399
L+V + G LF+RI + F R + + + A++YLH + +
Sbjct: 89 LIVMECLDGGELFSRIQ----DRGDQAFTEREASEIMKSIGEAIQYLHSIN-------IA 137
Query: 400 HGNLKSTNILLDD---NEMVLVSDYGFS------SLVAQPIAAQRMISYKSPEYQSSKKI 450
H ++K N+L N ++ ++D+GF+ + + +P Y +PE +K
Sbjct: 138 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTP---YYVAPEVLGPEKY 194
Query: 451 SRKSDVWSFGCLLLELLTG 469
+ D+WS G ++ LL G
Sbjct: 195 DKSCDMWSLGVIMYILLCG 213
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 75/171 (43%), Gaps = 16/171 (9%)
Query: 306 LITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRI 365
L TE+ +++ + KHP+++ LL Y S+ +V++F +L I K +
Sbjct: 70 LSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEI--VKRADAGF 127
Query: 366 PFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNE---MVLVSDYG 422
+ R + AL Y H + +IH ++K +LL E V + +G
Sbjct: 128 VYSEAVASHYMRQILEALRYCHDNN-------IIHRDVKPHCVLLASKENSAPVKLGGFG 180
Query: 423 FSSLVAQP--IAAQRMIS--YKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
+ + + +A R+ + + +PE + + DVW G +L LL+G
Sbjct: 181 VAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGF-----SSLVAQPIAAQRMISYKSPEYQSSKKI 450
+ +IH +LK +NI++ + + + D+G +S + P R Y++PE
Sbjct: 138 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGY 195
Query: 451 SRKSDVWSFGCLLLELLTGRI 471
D+WS GC++ E++ +I
Sbjct: 196 KENVDIWSVGCIMGEMVRHKI 216
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 75/171 (43%), Gaps = 16/171 (9%)
Query: 306 LITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRI 365
L TE+ +++ + KHP+++ LL Y S+ +V++F +L I K +
Sbjct: 68 LSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEI--VKRADAGF 125
Query: 366 PFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNE---MVLVSDYG 422
+ R + AL Y H + +IH ++K +LL E V + +G
Sbjct: 126 VYSEAVASHYMRQILEALRYCHDNN-------IIHRDVKPHCVLLASKENSAPVKLGGFG 178
Query: 423 FSSLVAQP--IAAQRMIS--YKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
+ + + +A R+ + + +PE + + DVW G +L LL+G
Sbjct: 179 VAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 84/213 (39%), Gaps = 25/213 (11%)
Query: 276 LGKGIFGNSYKALLEGRAP------VVVKRLRDLKPLITEEFRKQLLVIADQ--KHPNLL 327
LG G FG +A G V VK L+ +E L I +H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH 387
LL L++ ++ G+L N + K+R+ +A A + LH
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLR----RKSRV-LETDPAFAIANSTASTRDLLH 168
Query: 388 HKDKSRTQSA------VIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIA------AQR 435
+ A IH ++ + N+LL + + + D+G + + A+
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 228
Query: 436 MISYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
+ + +PE + +SDVWS+G LL E+ +
Sbjct: 229 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGF-----SSLVAQPIAAQRMISYKSPEYQSSKKI 450
+ +IH +LK +NI++ + + + D+G +S + P R Y++PE
Sbjct: 139 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGY 196
Query: 451 SRKSDVWSFGCLLLELLTGRI 471
D+WS GC++ E++ +I
Sbjct: 197 KENVDIWSVGCIMGEMVRHKI 217
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 381 RALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR----M 436
R L Y H + V+H +LK N+L+++ + ++D+G + + P
Sbjct: 111 RGLAYCH-------RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVT 163
Query: 437 ISYKSPE-YQSSKKISRKSDVWSFGCLLLELLTGR 470
+ Y+ P+ S S + D+W GC+ E+ TGR
Sbjct: 164 LWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGF-----SSLVAQPIAAQRMISYKSPEYQSSKKI 450
+ +IH +LK +NI++ + + + D+G +S + P R Y++PE
Sbjct: 146 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGY 203
Query: 451 SRKSDVWSFGCLLLELLTGRI 471
D+WS GC++ E++ +I
Sbjct: 204 KENVDIWSVGCIMGEMVRHKI 224
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGF-----SSLVAQPIAAQRMISYKSPEYQSSKKI 450
+ +IH +LK +NI++ + + + D+G +S + P R Y++PE
Sbjct: 139 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGY 196
Query: 451 SRKSDVWSFGCLLLELLTGRI 471
D+WS GC++ E++ +I
Sbjct: 197 KENVDIWSVGCIMGEMVRHKI 217
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGF-----SSLVAQPIAAQRMISYKSPEYQSSKKI 450
+ +IH +LK +NI++ + + + D+G +S + P R Y++PE
Sbjct: 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGY 202
Query: 451 SRKSDVWSFGCLLLELLTGRI 471
D+WS GC++ E++ +I
Sbjct: 203 KENVDIWSVGCIMGEMVRHKI 223
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGF-----SSLVAQPIAAQRMISYKSPEYQSSKKI 450
+ +IH +LK +NI++ + + + D+G ++ + P R Y++PE
Sbjct: 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRY--YRAPEVILGMGY 202
Query: 451 SRKSDVWSFGCLLLELLTG 469
+ D+WS GC++ EL+ G
Sbjct: 203 AANVDIWSVGCIMGELVKG 221
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGF-----SSLVAQPIAAQRMISYKSPEYQSSKKI 450
+ +IH +LK +NI++ + + + D+G +S + P R Y++PE
Sbjct: 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGY 202
Query: 451 SRKSDVWSFGCLLLELLTGRI 471
D+WS GC++ E++ +I
Sbjct: 203 KENVDIWSVGCIMGEMVRHKI 223
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGF-----SSLVAQPIAAQRMISYKSPEYQSSKKI 450
+ +IH +LK +NI++ + + + D+G +S + P R Y++PE
Sbjct: 144 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGY 201
Query: 451 SRKSDVWSFGCLLLELLTGRI 471
D+WS GC++ E++ +I
Sbjct: 202 KENVDIWSVGCIMGEMVRHKI 222
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGF-----SSLVAQPIAAQRMISYKSPEYQSSKKI 450
+ +IH +LK +NI++ + + + D+G +S + P R Y++PE
Sbjct: 183 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGY 240
Query: 451 SRKSDVWSFGCLLLELLTGRI 471
D+WS GC++ E++ +I
Sbjct: 241 KENVDIWSVGCIMGEMVRHKI 261
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 25/140 (17%)
Query: 340 LLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVI 399
L+V + G LF+RI + F R + + + A++YLH + +
Sbjct: 105 LIVMECLDGGELFSRIQ----DRGDQAFTEREASEIMKSIGEAIQYLHSIN-------IA 153
Query: 400 HGNLKSTNILLDD---NEMVLVSDYGFSSLVAQPIAAQRMIS-------YKSPEYQSSKK 449
H ++K N+L N ++ ++D+GF A+ + ++ Y +PE +K
Sbjct: 154 HRDVKPENLLYTSKRPNAILKLTDFGF----AKETTSHNSLTTPCYTPYYVAPEVLGPEK 209
Query: 450 ISRKSDVWSFGCLLLELLTG 469
+ D+WS G ++ LL G
Sbjct: 210 YDKSCDMWSLGVIMYILLCG 229
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 25/140 (17%)
Query: 340 LLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVI 399
L+V + G LF+RI + F R + + + A++YLH + +
Sbjct: 97 LIVMECLDGGELFSRIQ----DRGDQAFTEREASEIMKSIGEAIQYLHSIN-------IA 145
Query: 400 HGNLKSTNILLDD---NEMVLVSDYGFSSLVAQPIAAQRMIS-------YKSPEYQSSKK 449
H ++K N+L N ++ ++D+GF A+ + ++ Y +PE +K
Sbjct: 146 HRDVKPENLLYTSKRPNAILKLTDFGF----AKETTSHNSLTTPCYTPYYVAPEVLGPEK 201
Query: 450 ISRKSDVWSFGCLLLELLTG 469
+ D+WS G ++ LL G
Sbjct: 202 YDKSCDMWSLGVIMYILLCG 221
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGF-----SSLVAQPIAAQRMISYKSPEYQSSKKI 450
+ +IH +LK +NI++ + + + D+G +S + P R Y++PE
Sbjct: 146 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGY 203
Query: 451 SRKSDVWSFGCLLLELLTGRI 471
D+WS GC++ E++ +I
Sbjct: 204 KENVDIWSVGCIMGEMVRHKI 224
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 25/140 (17%)
Query: 340 LLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVI 399
L+V + G LF+RI + F R + + + A++YLH + +
Sbjct: 91 LIVMECLDGGELFSRIQ----DRGDQAFTEREASEIMKSIGEAIQYLHSIN-------IA 139
Query: 400 HGNLKSTNILLDD---NEMVLVSDYGFSSLVAQPIAAQRMIS-------YKSPEYQSSKK 449
H ++K N+L N ++ ++D+GF A+ + ++ Y +PE +K
Sbjct: 140 HRDVKPENLLYTSKRPNAILKLTDFGF----AKETTSHNSLTTPCYTPYYVAPEVLGPEK 195
Query: 450 ISRKSDVWSFGCLLLELLTG 469
+ D+WS G ++ LL G
Sbjct: 196 YDKSCDMWSLGVIMYILLCG 215
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 25/140 (17%)
Query: 340 LLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVI 399
L+V + G LF+RI + F R + + + A++YLH + +
Sbjct: 95 LIVMECLDGGELFSRIQ----DRGDQAFTEREASEIMKSIGEAIQYLHSIN-------IA 143
Query: 400 HGNLKSTNILLDD---NEMVLVSDYGFSSLVAQPIAAQRMIS-------YKSPEYQSSKK 449
H ++K N+L N ++ ++D+GF A+ + ++ Y +PE +K
Sbjct: 144 HRDVKPENLLYTSKRPNAILKLTDFGF----AKETTSHNSLTTPCYTPYYVAPEVLGPEK 199
Query: 450 ISRKSDVWSFGCLLLELLTG 469
+ D+WS G ++ LL G
Sbjct: 200 YDKSCDMWSLGVIMYILLCG 219
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 29/208 (13%)
Query: 276 LGKGIFGN----SYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
+G+G FG +K+ + A ++ + +K + F ++ ++A P ++ L
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF- 140
Query: 332 YYFSNDEKL-LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
Y F +D L +V ++ G+L N + S +P + +R A V AL+ +H
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLVNLM-----SNYDVPEKW-ARFYTAE-VVLALDAIH--- 190
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYKSPEYQSSKKI 450
IH ++K N+LLD + + ++D+G + + + + +P+Y S + +
Sbjct: 191 ----SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVL 246
Query: 451 ---------SRKSDVWSFGCLLLELLTG 469
R+ D WS G L E+L G
Sbjct: 247 KSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 25/140 (17%)
Query: 340 LLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVI 399
L+V + G LF+RI + F R + + + A++YLH + +
Sbjct: 89 LIVMECLDGGELFSRIQ----DRGDQAFTEREASEIMKSIGEAIQYLHSIN-------IA 137
Query: 400 HGNLKSTNILLDD---NEMVLVSDYGFSSLVAQPIAAQRMIS-------YKSPEYQSSKK 449
H ++K N+L N ++ ++D+GF A+ + ++ Y +PE +K
Sbjct: 138 HRDVKPENLLYTSKRPNAILKLTDFGF----AKETTSHNSLTTPCYTPYYVAPEVLGPEK 193
Query: 450 ISRKSDVWSFGCLLLELLTG 469
+ D+WS G ++ LL G
Sbjct: 194 YDKSCDMWSLGVIMYILLCG 213
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 25/140 (17%)
Query: 340 LLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVI 399
L+V + G LF+RI + F R + + + A++YLH + +
Sbjct: 96 LIVMECLDGGELFSRIQ----DRGDQAFTEREASEIMKSIGEAIQYLHSIN-------IA 144
Query: 400 HGNLKSTNILLDD---NEMVLVSDYGFSSLVAQPIAAQRMIS-------YKSPEYQSSKK 449
H ++K N+L N ++ ++D+GF A+ + ++ Y +PE +K
Sbjct: 145 HRDVKPENLLYTSKRPNAILKLTDFGF----AKETTSHNSLTTPCYTPYYVAPEVLGPEK 200
Query: 450 ISRKSDVWSFGCLLLELLTG 469
+ D+WS G ++ LL G
Sbjct: 201 YDKSCDMWSLGVIMYILLCG 220
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 29/208 (13%)
Query: 276 LGKGIFGN----SYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
+G+G FG +K+ + A ++ + +K + F ++ ++A P ++ L
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF- 140
Query: 332 YYFSNDEKL-LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
Y F +D L +V ++ G+L N + S +P + +R A V AL+ +H
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLVNLM-----SNYDVPEKW-ARFYTAE-VVLALDAIH--- 190
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYKSPEYQSSKKI 450
IH ++K N+LLD + + ++D+G + + + + +P+Y S + +
Sbjct: 191 ----SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVL 246
Query: 451 ---------SRKSDVWSFGCLLLELLTG 469
R+ D WS G L E+L G
Sbjct: 247 KSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 29/208 (13%)
Query: 276 LGKGIFGN----SYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
+G+G FG +K+ + A ++ + +K + F ++ ++A P ++ L
Sbjct: 77 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF- 135
Query: 332 YYFSNDEKL-LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
Y F +D L +V ++ G+L N + S +P + +R A V AL+ +H
Sbjct: 136 YAFQDDRYLYMVMEYMPGGDLVNLM-----SNYDVPEKW-ARFYTAE-VVLALDAIH--- 185
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYKSPEYQSSKKI 450
IH ++K N+LLD + + ++D+G + + + + +P+Y S + +
Sbjct: 186 ----SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVL 241
Query: 451 ---------SRKSDVWSFGCLLLELLTG 469
R+ D WS G L E+L G
Sbjct: 242 KSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 25/140 (17%)
Query: 340 LLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVI 399
L+V + G LF+RI + F R + + + A++YLH + +
Sbjct: 90 LIVMECLDGGELFSRIQ----DRGDQAFTEREASEIMKSIGEAIQYLHSIN-------IA 138
Query: 400 HGNLKSTNILLDD---NEMVLVSDYGFSSLVAQPIAAQRMIS-------YKSPEYQSSKK 449
H ++K N+L N ++ ++D+GF A+ + ++ Y +PE +K
Sbjct: 139 HRDVKPENLLYTSKRPNAILKLTDFGF----AKETTSHNSLTTPCYTPYYVAPEVLGPEK 194
Query: 450 ISRKSDVWSFGCLLLELLTG 469
+ D+WS G ++ LL G
Sbjct: 195 YDKSCDMWSLGVIMYILLCG 214
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGF-----SSLVAQPIAAQRMISYKSPEYQSSKKI 450
+ +IH +LK +NI++ + + + D+G +S + P R Y++PE
Sbjct: 183 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGY 240
Query: 451 SRKSDVWSFGCLLLELLTGRI 471
D+WS GC++ E++ +I
Sbjct: 241 KENVDIWSVGCIMGEMVRHKI 261
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 25/140 (17%)
Query: 340 LLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVI 399
L+V + G LF+RI + F R + + + A++YLH + +
Sbjct: 135 LIVMECLDGGELFSRIQ----DRGDQAFTEREASEIMKSIGEAIQYLHSIN-------IA 183
Query: 400 HGNLKSTNILLDD---NEMVLVSDYGFSSLVAQPIAAQRMIS-------YKSPEYQSSKK 449
H ++K N+L N ++ ++D+GF A+ + ++ Y +PE +K
Sbjct: 184 HRDVKPENLLYTSKRPNAILKLTDFGF----AKETTSHNSLTTPCYTPYYVAPEVLGPEK 239
Query: 450 ISRKSDVWSFGCLLLELLTG 469
+ D+WS G ++ LL G
Sbjct: 240 YDKSCDMWSLGVIMYILLCG 259
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 92/210 (43%), Gaps = 24/210 (11%)
Query: 276 LGKGIFGNSYKA----LLEGRAP--VVVKRLRDLKPLITE-EFRKQLLVIADQKHPNLLP 328
LG+G FG Y+ +++G A V VK + + L EF + V+ +++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 329 LLAYYFSNDEKLLVYKFAGNGNLFNRIHG----GKSSKNRIPFRCRSRLLVARGVARALE 384
LL L+V + +G+L + + +++ R P + + +A +A +
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM------IS 438
YL+ K +H +L + N ++ + V + D+G + + + ++ +
Sbjct: 144 YLNAK-------KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 439 YKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
+ +PE + SD+WSFG +L E+ +
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 25/140 (17%)
Query: 340 LLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVI 399
L+V + G LF+RI + F R + + + A++YLH + +
Sbjct: 141 LIVMECLDGGELFSRIQ----DRGDQAFTEREASEIMKSIGEAIQYLHSIN-------IA 189
Query: 400 HGNLKSTNILLDD---NEMVLVSDYGFSSLVAQPIAAQRMIS-------YKSPEYQSSKK 449
H ++K N+L N ++ ++D+GF A+ + ++ Y +PE +K
Sbjct: 190 HRDVKPENLLYTSKRPNAILKLTDFGF----AKETTSHNSLTTPCYTPYYVAPEVLGPEK 245
Query: 450 ISRKSDVWSFGCLLLELLTG 469
+ D+WS G ++ LL G
Sbjct: 246 YDKSCDMWSLGVIMYILLCG 265
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/287 (19%), Positives = 116/287 (40%), Gaps = 41/287 (14%)
Query: 276 LGKGIFGNSYKALLEG------RAPVVVKRLRDLKPLITE-EFRKQLLVIADQKHPNLLP 328
LG+G FG Y+ + +G V +K + + + EF + V+ + +++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 329 LLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRL----LVARGVARALE 384
LL L++ + G+L + + + + P L +A +A +
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR------MIS 438
YL+ + +H +L + N ++ ++ V + D+G + + + ++ +
Sbjct: 153 YLN-------ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 205
Query: 439 YKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWT 498
+ SPE + SDVWSFG +L E+ T QG++ VLR V E
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQ----VLRFVMEGGL 258
Query: 499 AEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
+ D+ + L ++ C +P+ RP E++S ++
Sbjct: 259 LDKPDNCPDM----------LFELMRMCWQYNPKMRPSFLEIISSIK 295
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 25/140 (17%)
Query: 340 LLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVI 399
L+V + G LF+RI + F R + + + A++YLH + +
Sbjct: 91 LIVMECLDGGELFSRIQ----DRGDQAFTEREASEIMKSIGEAIQYLHSIN-------IA 139
Query: 400 HGNLKSTNILLDD---NEMVLVSDYGFSSLVAQPIAAQRMIS-------YKSPEYQSSKK 449
H ++K N+L N ++ ++D+GF A+ + ++ Y +PE +K
Sbjct: 140 HRDVKPENLLYTSKRPNAILKLTDFGF----AKETTSHNSLTTPCYTPYYVAPEVLGPEK 195
Query: 450 ISRKSDVWSFGCLLLELLTG 469
+ D+WS G ++ LL G
Sbjct: 196 YDKSCDMWSLGVIMYILLCG 215
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 92/218 (42%), Gaps = 41/218 (18%)
Query: 273 AEGLGKGIFGNSYKAL-----LEGRAPVVVKRLR--DLKPLITEEFRKQLLVIADQKHPN 325
E LG G+F K L+ A + KR + + E+ +++ ++ + +HPN
Sbjct: 16 GEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 326 LLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385
++ L Y + + +L+ + G LF+ + + K + + L + + + Y
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFL--KQILNGVYY 129
Query: 386 LHHKDKSRTQSAVIHGNLKSTNILLDDNEM----VLVSDYG----------FSSLVAQPI 431
LH + H +LK NI+L D + + + D+G F ++ P
Sbjct: 130 LH-------SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP- 181
Query: 432 AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
+ +PE + + + ++D+WS G + LL+G
Sbjct: 182 ------EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGF-----SSLVAQPIAAQRMISYKSPEYQSSKKI 450
+ +IH +LK +NI++ + + + D+G +S + +P R Y++PE
Sbjct: 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY--YRAPEVILGMGY 202
Query: 451 SRKSDVWSFGCLLLELLTGRI 471
D+WS GC++ E++ +I
Sbjct: 203 KENVDLWSVGCIMGEMVCHKI 223
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/287 (19%), Positives = 118/287 (41%), Gaps = 41/287 (14%)
Query: 276 LGKGIFGNSYKALLEG------RAPVVVKRLRDLKPLITE-EFRKQLLVIADQKHPNLLP 328
LG+G FG Y+ + +G V +K + + + EF + V+ + +++
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 329 LLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCR---SRLLVARG-VARALE 384
LL L++ + G+L + + + + P S+++ G +A +
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM------IS 438
YL+ + +H +L + N ++ ++ V + D+G + + + ++ +
Sbjct: 143 YLN-------ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 195
Query: 439 YKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWT 498
+ SPE + SDVWSFG +L E+ T QG++ VLR V E
Sbjct: 196 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQ----VLRFVMEGGL 248
Query: 499 AEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
+ D+ + L ++ C +P+ RP E++S ++
Sbjct: 249 LDKPDNCPDM----------LFELMRMCWQYNPKMRPSFLEIISSIK 285
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGF-----SSLVAQPIAAQRMISYKSPEYQSSKKI 450
+ +IH +LK +NI++ + + + D+G +S + P R Y++PE
Sbjct: 139 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGY 196
Query: 451 SRKSDVWSFGCLLLELLTGRI 471
D+WS GC++ E++ +I
Sbjct: 197 KENVDLWSVGCIMGEMVCHKI 217
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 90/207 (43%), Gaps = 27/207 (13%)
Query: 276 LGKGIFGN----SYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
+G+G FG +KA + A ++ + +K + F ++ ++A P ++ L
Sbjct: 83 IGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFC 142
Query: 332 YYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDK 391
+ + +V ++ G+L N + S +P + ++ A V AL+ +H
Sbjct: 143 AFQDDKYLYMVMEYMPGGDLVNLM-----SNYDVPEKW-AKFYTAE-VVLALDAIH---- 191
Query: 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYKSPEYQSSKKI- 450
+IH ++K N+LLD + + ++D+G + + + +P+Y S + +
Sbjct: 192 ---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLK 248
Query: 451 --------SRKSDVWSFGCLLLELLTG 469
R+ D WS G L E+L G
Sbjct: 249 SQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/287 (19%), Positives = 117/287 (40%), Gaps = 41/287 (14%)
Query: 276 LGKGIFGNSYKALLEG------RAPVVVKRLRDLKPLITE-EFRKQLLVIADQKHPNLLP 328
LG+G FG Y+ + +G V +K + + + EF + V+ + +++
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 329 LLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCR---SRLLVARG-VARALE 384
LL L++ + G+L + + + P S+++ G +A +
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM------IS 438
YL+ + +H +L + N ++ ++ V + D+G + + + ++ +
Sbjct: 175 YLN-------ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 227
Query: 439 YKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWT 498
+ SPE + SDVWSFG +L E+ T QG++ VLR V E
Sbjct: 228 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQ----VLRFVMEGGL 280
Query: 499 AEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
+ D+ + L ++ C +P+ RP E++S ++
Sbjct: 281 LDKPDNCPDM----------LFELMRMCWQYNPKMRPSFLEIISSIK 317
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 16/157 (10%)
Query: 274 EGLGKGIFGNSYKALLEGR-APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAY 332
E +GKG FG ++ G V + R+ + E Q +++ +H N+L +A
Sbjct: 12 ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVML---RHENILGFIAA 68
Query: 333 YFSND----EKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
++ + LV + +G+LF+ + NR + +A A L +LH
Sbjct: 69 DNKDNGTWTQLWLVSDYHEHGSLFDYL-------NRYTVTVEGMIKLALSTASGLAHLHM 121
Query: 389 K-DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS 424
+ ++ + A+ H +LKS NIL+ N ++D G +
Sbjct: 122 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 158
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 16/157 (10%)
Query: 274 EGLGKGIFGNSYKALLEGR-APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAY 332
E +GKG FG ++ G V + R+ + E Q +++ +H N+L +A
Sbjct: 15 ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVML---RHENILGFIAA 71
Query: 333 YFSND----EKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
++ + LV + +G+LF+ + NR + +A A L +LH
Sbjct: 72 DNKDNGTWTQLWLVSDYHEHGSLFDYL-------NRYTVTVEGMIKLALSTASGLAHLHM 124
Query: 389 K-DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS 424
+ ++ + A+ H +LKS NIL+ N ++D G +
Sbjct: 125 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 161
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 84/215 (39%), Gaps = 29/215 (13%)
Query: 276 LGKGIFGNSYKALLEGRAP------VVVKRLRDLKPLITEEFRKQLLVIADQ--KHPNLL 327
LG G FG +A G V VK L+ +E L I +H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIP--------FRCRSRLLVARGV 379
LL L++ ++ G+L N + P R L + V
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQV 173
Query: 380 ARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIA------A 433
A+ + +L K+ IH ++ + N+LL + + + D+G + + A
Sbjct: 174 AQGMAFLASKN-------CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 226
Query: 434 QRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
+ + + +PE + +SDVWS+G LL E+ +
Sbjct: 227 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 104/250 (41%), Gaps = 50/250 (20%)
Query: 255 IEDEQPAGF--KLNDLLKAPAE---GLGKGIFGNSYKAL--LEGRAPVVVKRLRDLKPLI 307
+ED++ ++ D L+ E LG+G FG + L G++ V +K +R++
Sbjct: 33 VEDDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKY- 91
Query: 308 TEEFRKQLLVIA-----DQKHPNLLPLLAYYFS-NDEKLLVYKFAGNGNLFNRIHGGKSS 361
E R ++ V+ D+++ L L++ +F+ + + ++ G N F +
Sbjct: 92 REAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGK-NTFEFL----KE 146
Query: 362 KNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM------ 415
N P+ +A + AL +LH ++ + H +LK NIL ++E
Sbjct: 147 NNFQPYPLPHVRHMAYQLCHALRFLH-------ENQLTHTDLKPENILFVNSEFETLYNE 199
Query: 416 -------------VLVSDYG---FSSLVAQPIAAQRMISYKSPEYQSSKKISRKSDVWSF 459
+ V+D+G F I A R Y+ PE ++ DVWS
Sbjct: 200 HKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATR--HYRPPEVILELGWAQPCDVWSI 257
Query: 460 GCLLLELLTG 469
GC+L E G
Sbjct: 258 GCILFEYYRG 267
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 104/250 (41%), Gaps = 50/250 (20%)
Query: 255 IEDEQPAGF--KLNDLLKAPAE---GLGKGIFGNSYKAL--LEGRAPVVVKRLRDLKPLI 307
+ED++ ++ D L+ E LG+G FG + L G++ V +K +R++
Sbjct: 1 VEDDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKY- 59
Query: 308 TEEFRKQLLVIA-----DQKHPNLLPLLAYYFS-NDEKLLVYKFAGNGNLFNRIHGGKSS 361
E R ++ V+ D+++ L L++ +F+ + + ++ G N F +
Sbjct: 60 REAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGK-NTFEFL----KE 114
Query: 362 KNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM------ 415
N P+ +A + AL +LH ++ + H +LK NIL ++E
Sbjct: 115 NNFQPYPLPHVRHMAYQLCHALRFLH-------ENQLTHTDLKPENILFVNSEFETLYNE 167
Query: 416 -------------VLVSDYG---FSSLVAQPIAAQRMISYKSPEYQSSKKISRKSDVWSF 459
+ V+D+G F I A R Y+ PE ++ DVWS
Sbjct: 168 HKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATR--HYRPPEVILELGWAQPCDVWSI 225
Query: 460 GCLLLELLTG 469
GC+L E G
Sbjct: 226 GCILFEYYRG 235
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/287 (19%), Positives = 115/287 (40%), Gaps = 41/287 (14%)
Query: 276 LGKGIFGNSYKALLEG------RAPVVVKRLRDLKPLITE-EFRKQLLVIADQKHPNLLP 328
LG+G FG Y+ + +G V +K + + + EF + V+ + +++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 329 LLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRL----LVARGVARALE 384
LL L++ + G+L + + + P L +A +A +
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM------IS 438
YL+ + +H +L + N ++ ++ V + D+G + + + ++ +
Sbjct: 140 YLN-------ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 192
Query: 439 YKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWT 498
+ SPE + SDVWSFG +L E+ T QG++ VLR V E
Sbjct: 193 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQ----VLRFVMEGGL 245
Query: 499 AEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
+ D+ + L ++ C +P+ RP E++S ++
Sbjct: 246 LDKPDNCPDM----------LFELMRMCWQYNPKMRPSFLEIISSIK 282
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGF-----SSLVAQPIAAQRMISYKSPEYQSSKKI 450
+ +IH +LK +NI++ + + + D+G +S + P R Y++PE
Sbjct: 150 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGY 207
Query: 451 SRKSDVWSFGCLLLELLTGRI 471
D+WS GC++ E++ +I
Sbjct: 208 KENVDLWSVGCIMGEMVCHKI 228
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 16/157 (10%)
Query: 274 EGLGKGIFGNSYKALLEGR-APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAY 332
E +GKG FG ++ G V + R+ + E Q +++ +H N+L +A
Sbjct: 10 ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVML---RHENILGFIAA 66
Query: 333 YFSND----EKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
++ + LV + +G+LF+ + NR + +A A L +LH
Sbjct: 67 DNKDNGTWTQLWLVSDYHEHGSLFDYL-------NRYTVTVEGMIKLALSTASGLAHLHM 119
Query: 389 K-DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS 424
+ ++ + A+ H +LKS NIL+ N ++D G +
Sbjct: 120 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 156
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 77/175 (44%), Gaps = 34/175 (19%)
Query: 309 EEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFR 368
E+ +++ ++ + +HPN++ L Y + + +L+ + G LF+ + + K +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEE 114
Query: 369 CRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM----VLVSDYG-- 422
+ L + + + YLH + H +LK NI+L D + + + D+G
Sbjct: 115 EATEFL--KQILNGVYYLH-------SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Query: 423 --------FSSLVAQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
F ++ P + +PE + + + ++D+WS G + LL+G
Sbjct: 166 HKIDFGNEFKNIFGTP-------EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/287 (19%), Positives = 117/287 (40%), Gaps = 41/287 (14%)
Query: 276 LGKGIFGNSYKALLEG------RAPVVVKRLRDLKPLITE-EFRKQLLVIADQKHPNLLP 328
LG+G FG Y+ + +G V +K + + + EF + V+ + +++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 329 LLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCR---SRLLVARG-VARALE 384
LL L++ + G+L + + + P S+++ G +A +
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM------IS 438
YL+ + +H +L + N ++ ++ V + D+G + + + ++ +
Sbjct: 146 YLN-------ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 439 YKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWT 498
+ SPE + SDVWSFG +L E+ T QG++ VLR V E
Sbjct: 199 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQ----VLRFVMEGGL 251
Query: 499 AEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
+ D+ + L ++ C +P+ RP E++S ++
Sbjct: 252 LDKPDNCPDM----------LFELMRMCWQYNPKMRPSFLEIISSIK 288
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/287 (19%), Positives = 115/287 (40%), Gaps = 41/287 (14%)
Query: 276 LGKGIFGNSYKALLEG------RAPVVVKRLRDLKPLITE-EFRKQLLVIADQKHPNLLP 328
LG+G FG Y+ + +G V +K + + + EF + V+ + +++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 329 LLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRL----LVARGVARALE 384
LL L++ + G+L + + + P L +A +A +
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR------MIS 438
YL+ + +H +L + N ++ ++ V + D+G + + + ++ +
Sbjct: 153 YLN-------ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 205
Query: 439 YKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWT 498
+ SPE + SDVWSFG +L E+ T QG++ VLR V E
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQ----VLRFVMEGGL 258
Query: 499 AEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
+ D+ + L ++ C +P+ RP E++S ++
Sbjct: 259 LDKPDNCPDM----------LFELMRMCWQYNPKMRPSFLEIISSIK 295
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 104/250 (41%), Gaps = 50/250 (20%)
Query: 255 IEDEQPAGF--KLNDLLKAPAE---GLGKGIFGNSYKAL--LEGRAPVVVKRLRDLKPLI 307
+ED++ ++ D L+ E LG+G FG + L G++ V +K +R++
Sbjct: 10 VEDDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKY- 68
Query: 308 TEEFRKQLLVIA-----DQKHPNLLPLLAYYFS-NDEKLLVYKFAGNGNLFNRIHGGKSS 361
E R ++ V+ D+++ L L++ +F+ + + ++ G N F +
Sbjct: 69 REAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGK-NTFEFL----KE 123
Query: 362 KNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM------ 415
N P+ +A + AL +LH ++ + H +LK NIL ++E
Sbjct: 124 NNFQPYPLPHVRHMAYQLCHALRFLH-------ENQLTHTDLKPENILFVNSEFETLYNE 176
Query: 416 -------------VLVSDYG---FSSLVAQPIAAQRMISYKSPEYQSSKKISRKSDVWSF 459
+ V+D+G F I A R Y+ PE ++ DVWS
Sbjct: 177 HKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATR--HYRPPEVILELGWAQPCDVWSI 234
Query: 460 GCLLLELLTG 469
GC+L E G
Sbjct: 235 GCILFEYYRG 244
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/287 (19%), Positives = 115/287 (40%), Gaps = 41/287 (14%)
Query: 276 LGKGIFGNSYKALLEG------RAPVVVKRLRDLKPLITE-EFRKQLLVIADQKHPNLLP 328
LG+G FG Y+ + +G V +K + + + EF + V+ + +++
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 329 LLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRL----LVARGVARALE 384
LL L++ + G+L + + + P L +A +A +
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM------IS 438
YL+ + +H +L + N ++ ++ V + D+G + + + ++ +
Sbjct: 144 YLN-------ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 439 YKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWT 498
+ SPE + SDVWSFG +L E+ T QG++ VLR V E
Sbjct: 197 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQ----VLRFVMEGGL 249
Query: 499 AEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
+ D+ + L ++ C +P+ RP E++S ++
Sbjct: 250 LDKPDNCPDM----------LFELMRMCWQYNPKMRPSFLEIISSIK 286
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/287 (19%), Positives = 117/287 (40%), Gaps = 41/287 (14%)
Query: 276 LGKGIFGNSYKALLEG------RAPVVVKRLRDLKPLITE-EFRKQLLVIADQKHPNLLP 328
LG+G FG Y+ + +G V +K + + + EF + V+ + +++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 329 LLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCR---SRLLVARG-VARALE 384
LL L++ + G+L + + + P S+++ G +A +
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM------IS 438
YL+ + +H +L + N ++ ++ V + D+G + + + ++ +
Sbjct: 147 YLN-------ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 199
Query: 439 YKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWT 498
+ SPE + SDVWSFG +L E+ T QG++ VLR V E
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQ----VLRFVMEGGL 252
Query: 499 AEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
+ D+ + L ++ C +P+ RP E++S ++
Sbjct: 253 LDKPDNCPDM----------LFELMRMCWQYNPKMRPSFLEIISSIK 289
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/287 (19%), Positives = 117/287 (40%), Gaps = 41/287 (14%)
Query: 276 LGKGIFGNSYKALLEG------RAPVVVKRLRDLKPLITE-EFRKQLLVIADQKHPNLLP 328
LG+G FG Y+ + +G V +K + + + EF + V+ + +++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 329 LLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCR---SRLLVARG-VARALE 384
LL L++ + G+L + + + P S+++ G +A +
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR------MIS 438
YL+ + +H +L + N ++ ++ V + D+G + + + ++ +
Sbjct: 146 YLN-------ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 439 YKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWT 498
+ SPE + SDVWSFG +L E+ T QG++ VLR V E
Sbjct: 199 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQ----VLRFVMEGGL 251
Query: 499 AEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
+ D+ + L ++ C +P+ RP E++S ++
Sbjct: 252 LDKPDNCPDM----------LFELMRMCWQYNPKMRPSFLEIISSIK 288
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 117/287 (40%), Gaps = 41/287 (14%)
Query: 276 LGKGIFGNSYKALLEG------RAPVVVKRLRDLKPLITE-EFRKQLLVIADQKHPNLLP 328
LG+G FG Y+ + +G V +K + + + EF + V+ + +++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 329 LLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCR---SRLLVARG-VARALE 384
LL L++ + G+L + + + P S+++ G +A +
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 385 YLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQR------MIS 438
YL+ + +H +L + N + ++ V + D+G + + + ++ +
Sbjct: 140 YLN-------ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 192
Query: 439 YKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWT 498
+ SPE + SDVWSFG +L E+ T QG++ VLR V E
Sbjct: 193 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---LAEQPYQGLSNEQ----VLRFVMEGGL 245
Query: 499 AEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545
+ D+ + LL++ C +P+ RP E++S ++
Sbjct: 246 LDKPDNCPDM----------LLELMRMCWQYNPKMRPSFLEIISSIK 282
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 16/157 (10%)
Query: 274 EGLGKGIFGNSYKALLEGR-APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAY 332
E +GKG FG ++ G V + R+ + E Q +++ +H N+L +A
Sbjct: 35 ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVML---RHENILGFIAA 91
Query: 333 YFSND----EKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
++ + LV + +G+LF+ + NR + +A A L +LH
Sbjct: 92 DNKDNGTWTQLWLVSDYHEHGSLFDYL-------NRYTVTVEGMIKLALSTASGLAHLHM 144
Query: 389 K-DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS 424
+ ++ + A+ H +LKS NIL+ N ++D G +
Sbjct: 145 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 181
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 16/157 (10%)
Query: 274 EGLGKGIFGNSYKALLEGR-APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAY 332
E +GKG FG ++ G V + R+ + E Q +++ +H N+L +A
Sbjct: 9 ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVML---RHENILGFIAA 65
Query: 333 YFSND----EKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
++ + LV + +G+LF+ + NR + +A A L +LH
Sbjct: 66 DNKDNGTWTQLWLVSDYHEHGSLFDYL-------NRYTVTVEGMIKLALSTASGLAHLHM 118
Query: 389 K-DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS 424
+ ++ + A+ H +LKS NIL+ N ++D G +
Sbjct: 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 16/157 (10%)
Query: 274 EGLGKGIFGNSYKALLEGR-APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAY 332
E +GKG FG ++ G V + R+ + E Q +++ +H N+L +A
Sbjct: 48 ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVML---RHENILGFIAA 104
Query: 333 YFSND----EKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
++ + LV + +G+LF+ + NR + +A A L +LH
Sbjct: 105 DNKDNGTWTQLWLVSDYHEHGSLFDYL-------NRYTVTVEGMIKLALSTASGLAHLHM 157
Query: 389 K-DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS 424
+ ++ + A+ H +LKS NIL+ N ++D G +
Sbjct: 158 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 194
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 77/175 (44%), Gaps = 34/175 (19%)
Query: 309 EEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFR 368
E+ +++ ++ + +HPN++ L Y + + +L+ + G LF+ + + K +
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEE 113
Query: 369 CRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM----VLVSDYG-- 422
+ L + + + YLH + H +LK NI+L D + + + D+G
Sbjct: 114 EATEFL--KQILNGVYYLH-------SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
Query: 423 --------FSSLVAQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
F ++ P + +PE + + + ++D+WS G + LL+G
Sbjct: 165 HKIDFGNEFKNIFGTP-------EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 77/175 (44%), Gaps = 34/175 (19%)
Query: 309 EEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFR 368
E+ +++ ++ + +HPN++ L Y + + +L+ + G LF+ + + K +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEE 114
Query: 369 CRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM----VLVSDYG-- 422
+ L + + + YLH + H +LK NI+L D + + + D+G
Sbjct: 115 EATEFL--KQILNGVYYLH-------SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Query: 423 --------FSSLVAQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
F ++ P + +PE + + + ++D+WS G + LL+G
Sbjct: 166 HKIDFGNEFKNIFGTP-------EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 77/175 (44%), Gaps = 34/175 (19%)
Query: 309 EEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFR 368
E+ +++ ++ + +HPN++ L Y + + +L+ + G LF+ + + K +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEE 114
Query: 369 CRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM----VLVSDYG-- 422
+ L + + + YLH + H +LK NI+L D + + + D+G
Sbjct: 115 EATEFL--KQILNGVYYLH-------SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Query: 423 --------FSSLVAQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
F ++ P + +PE + + + ++D+WS G + LL+G
Sbjct: 166 HKIDFGNEFKNIFGTP-------EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 77/175 (44%), Gaps = 34/175 (19%)
Query: 309 EEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFR 368
E+ +++ ++ + +HPN++ L Y + + +L+ + G LF+ + + K +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEE 114
Query: 369 CRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM----VLVSDYG-- 422
+ L + + + YLH + H +LK NI+L D + + + D+G
Sbjct: 115 EATEFL--KQILNGVYYLH-------SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Query: 423 --------FSSLVAQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
F ++ P + +PE + + + ++D+WS G + LL+G
Sbjct: 166 HKIDFGNEFKNIFGTP-------EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 124/294 (42%), Gaps = 65/294 (22%)
Query: 276 LGKGIFGNSYKA--LLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYY 333
LG+G FG KA L+ R +K++R + ++ +++++A H ++ A +
Sbjct: 14 LGQGAFGQVVKARNALDSRY-YAIKKIRHTEEKLST-ILSEVMLLASLNHQYVVRYYAAW 71
Query: 334 FS-------------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVA 380
+ ++ NG L++ IH ++ R + RL R +
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY---WRLF--RQIL 126
Query: 381 RALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYK 440
AL Y+H + +IH +LK NI +D++ V + D+G + V + + ++ S
Sbjct: 127 EALSYIHSQ-------GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 441 SP-------------EYQSSKKI------SRKSDVWSFGCLLLELLTGRISTHSAPQGIN 481
P Y +++ + + K D++S G + E++ + G+
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI------YPFSTGME 233
Query: 482 GADLCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRP 535
++ LR+V E+ + D+++ V++ +++LL + P KRP
Sbjct: 234 RVNILK-KLRSVSIEFPPDFDDNKMKVEKK----IIRLL------IDHDPNKRP 276
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 77/175 (44%), Gaps = 34/175 (19%)
Query: 309 EEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFR 368
E+ +++ ++ + +HPN++ L Y + + +L+ + G LF+ + + K +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEE 114
Query: 369 CRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM----VLVSDYG-- 422
+ L + + + YLH + H +LK NI+L D + + + D+G
Sbjct: 115 EATEFL--KQILNGVYYLH-------SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Query: 423 --------FSSLVAQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
F ++ P + +PE + + + ++D+WS G + LL+G
Sbjct: 166 HKIDFGNEFKNIFGTP-------EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 77/175 (44%), Gaps = 34/175 (19%)
Query: 309 EEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFR 368
E+ +++ ++ + +HPN++ L Y + + +L+ + G LF+ + + K +
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEE 113
Query: 369 CRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM----VLVSDYG-- 422
+ L + + + YLH + H +LK NI+L D + + + D+G
Sbjct: 114 EATEFL--KQILNGVYYLH-------SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
Query: 423 --------FSSLVAQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
F ++ P + +PE + + + ++D+WS G + LL+G
Sbjct: 165 HKIDFGNEFKNIFGTP-------EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 77/175 (44%), Gaps = 34/175 (19%)
Query: 309 EEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFR 368
E+ +++ ++ + +HPN++ L Y + + +L+ + G LF+ + + K +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEE 114
Query: 369 CRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM----VLVSDYG-- 422
+ L + + + YLH + H +LK NI+L D + + + D+G
Sbjct: 115 EATEFL--KQILNGVYYLH-------SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Query: 423 --------FSSLVAQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
F ++ P + +PE + + + ++D+WS G + LL+G
Sbjct: 166 HKIDFGNEFKNIFGTP-------EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 77/175 (44%), Gaps = 34/175 (19%)
Query: 309 EEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFR 368
E+ +++ ++ + +HPN++ L Y + + +L+ + G LF+ + + K +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEE 114
Query: 369 CRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM----VLVSDYG-- 422
+ L + + + YLH + H +LK NI+L D + + + D+G
Sbjct: 115 EATEFL--KQILNGVYYLH-------SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Query: 423 --------FSSLVAQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
F ++ P + +PE + + + ++D+WS G + LL+G
Sbjct: 166 HKIDFGNEFKNIFGTP-------EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 77/175 (44%), Gaps = 34/175 (19%)
Query: 309 EEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFR 368
E+ +++ ++ + +HPN++ L Y + + +L+ + G LF+ + + K +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEE 114
Query: 369 CRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM----VLVSDYG-- 422
+ L + + + YLH + H +LK NI+L D + + + D+G
Sbjct: 115 EATEFL--KQILNGVYYLH-------SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Query: 423 --------FSSLVAQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
F ++ P + +PE + + + ++D+WS G + LL+G
Sbjct: 166 HKIDFGNEFKNIFGTP-------EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 78/175 (44%), Gaps = 34/175 (19%)
Query: 309 EEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFR 368
E+ +++ ++ + +HPN++ L Y + + +L+ + G LF+ + + K +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEE 114
Query: 369 CRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM----VLVSDYG-- 422
+ L + + + YLH + H +LK NI+L D + + + D+G
Sbjct: 115 EATEFL--KQILNGVYYLH-------SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Query: 423 --------FSSLVAQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
F ++ P ++ +PE + + + ++D+WS G + LL+G
Sbjct: 166 HKIDFGNEFKNIFGTP-------AFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 87/217 (40%), Gaps = 31/217 (14%)
Query: 276 LGKGIFGNSYKALLEGRAP------VVVKRLRDLKPLITEEFRKQLLVIADQ--KHPNLL 327
LG G FG +A G V VK L+ +E L I +H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 328 PLLAYYFSNDEKLLVYKFAGNGNLFN-----RIHGGKSSKN-----RIPFRCRSRLLVAR 377
LL L++ ++ G+L N R G + S N R L +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSS 173
Query: 378 GVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIA----- 432
VA+ + +L K+ IH ++ + N+LL + + + D+G + +
Sbjct: 174 QVAQGMAFLASKN-------CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 226
Query: 433 -AQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT 468
A+ + + +PE + +SDVWS+G LL E+ +
Sbjct: 227 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 77/175 (44%), Gaps = 34/175 (19%)
Query: 309 EEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFR 368
E+ +++ ++ + +HPN++ L Y + + +L+ + G LF+ + + K +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEE 114
Query: 369 CRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM----VLVSDYG-- 422
+ L + + + YLH + H +LK NI+L D + + + D+G
Sbjct: 115 EATEFL--KQILNGVYYLH-------SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Query: 423 --------FSSLVAQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
F ++ P + +PE + + + ++D+WS G + LL+G
Sbjct: 166 HKIDFGNEFKNIFGTP-------EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGF-----SSLVAQPIAAQRMISYKSPEYQSSKKI 450
+ +IH +LK +NI++ + + + D+G +S + P R Y++PE
Sbjct: 145 AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGY 202
Query: 451 SRKSDVWSFGCLLLELLTGRI 471
D+WS G ++ E++ G +
Sbjct: 203 KENVDIWSVGVIMGEMIKGGV 223
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 396 SAVIHGNLKSTNILLDDNEMVLVSDYGF-----SSLVAQPIAAQRMISYKSPEYQSSKKI 450
+ +IH +LK +NI++ + + + D+G +S + P R Y++PE
Sbjct: 145 AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGY 202
Query: 451 SRKSDVWSFGCLLLELLTGRI 471
D+WS G ++ E++ G +
Sbjct: 203 KENVDIWSVGVIMGEMIKGGV 223
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 77/175 (44%), Gaps = 34/175 (19%)
Query: 309 EEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFR 368
E+ +++ ++ + +HPN++ L Y + + +L+ + G LF+ + + K +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL----AEKESLTEE 114
Query: 369 CRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM----VLVSDYG-- 422
+ L + + + YLH + H +LK NI+L D + + + D+G
Sbjct: 115 EATEFL--KQILNGVYYLH-------SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Query: 423 --------FSSLVAQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
F ++ P + +PE + + + ++D+WS G + LL+G
Sbjct: 166 HKIDFGNEFKNIFGTP-------EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 20/156 (12%)
Query: 323 HPNLLPLLAYYFSNDEKL-LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVAR 381
H + LAY F L LV G++ R H ++ F+ + +
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDI--RYHIYNVDEDNPGFQEPRAIFYTAQIVS 300
Query: 382 ALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI---- 437
LE+LH ++ +I+ +LK N+LLDD+ V +SD G L + A Q
Sbjct: 301 GLEHLHQRN-------IIYRDLKPENVLLDDDGNVRISDLG---LAVELKAGQTKTKGYA 350
Query: 438 ---SYKSPEYQSSKKISRKSDVWSFGCLLLELLTGR 470
+ +PE ++ D ++ G L E++ R
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 19/157 (12%)
Query: 277 GKGIFGNSYKA-LLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335
+G FG +KA L+ V + L+D + +E +++ KH NLL +A
Sbjct: 24 ARGRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSE---REIFSTPGMKHENLLQFIAAEKR 80
Query: 336 ND----EKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK-- 389
E L+ F G+L + + G + N + C VA ++R L YLH
Sbjct: 81 GSNLEVELWLITAFHDKGSLTDYLKGNIITWNEL---CH----VAETMSRGLSYLHEDVP 133
Query: 390 --DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS 424
+ ++ H + KS N+LL + +++D+G +
Sbjct: 134 WCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLA 170
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 71/176 (40%), Gaps = 20/176 (11%)
Query: 323 HPNLLPLLAYYFSNDEKL-LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVAR 381
H + LAY F L LV G++ R H ++ F+ + +
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDI--RYHIYNVDEDNPGFQEPRAIFYTAQIVS 300
Query: 382 ALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI---- 437
LE+LH ++ +I+ +LK N+LLDD+ V +SD G L + A Q
Sbjct: 301 GLEHLHQRN-------IIYRDLKPENVLLDDDGNVRISDLG---LAVELKAGQTKTKGYA 350
Query: 438 ---SYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVL 490
+ +PE ++ D ++ G L E++ R + + + +L VL
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVL 406
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 71/176 (40%), Gaps = 20/176 (11%)
Query: 323 HPNLLPLLAYYFSNDEKL-LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVAR 381
H + LAY F L LV G++ R H ++ F+ + +
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDI--RYHIYNVDEDNPGFQEPRAIFYTAQIVS 300
Query: 382 ALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI---- 437
LE+LH ++ +I+ +LK N+LLDD+ V +SD G L + A Q
Sbjct: 301 GLEHLHQRN-------IIYRDLKPENVLLDDDGNVRISDLG---LAVELKAGQTKTKGYA 350
Query: 438 ---SYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVL 490
+ +PE ++ D ++ G L E++ R + + + +L VL
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVL 406
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 89/209 (42%), Gaps = 28/209 (13%)
Query: 276 LGKGIFGNSYKALLEGRAPV----VVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
+G+G FG ++ + ++ + LK T FR++ V+ + + L
Sbjct: 82 IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGD-CQWITALH 140
Query: 332 YYFSNDEKL-LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
Y F ++ L LV + G+L + ++++P +R + V A++ +H
Sbjct: 141 YAFQDENHLYLVMDYYVGGDLLTLL---SKFEDKLP-EDMARFYIGEMVL-AIDSIH--- 192
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYKSPEYQSSK-- 448
Q +H ++K N+LLD N + ++D+G + Q ++ +P+Y S +
Sbjct: 193 ----QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEIL 248
Query: 449 --------KISRKSDVWSFGCLLLELLTG 469
K + D WS G + E+L G
Sbjct: 249 QAMEDGMGKYGPECDWWSLGVCMYEMLYG 277
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 79/206 (38%), Gaps = 23/206 (11%)
Query: 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRK---QLLVIADQKHPNLLPLL 330
E LGKG F + + + ++ + K L + +K + + KHPN++ L
Sbjct: 37 EELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 96
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
LV+ G LF I + C ++L ++ ++H D
Sbjct: 97 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQIL------ESVNHIHQHD 150
Query: 391 KSRTQSAVIHGNLKSTNILLDD---NEMVLVSDYGFSSLVAQPIAAQRMIS----YKSPE 443
++H +LK N+LL V ++D+G + V A + Y SPE
Sbjct: 151 -------IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPE 203
Query: 444 YQSSKKISRKSDVWSFGCLLLELLTG 469
+ D+W+ G +L LL G
Sbjct: 204 VLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 89/209 (42%), Gaps = 28/209 (13%)
Query: 276 LGKGIFGNSYKALLEGRAPV----VVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLA 331
+G+G FG ++ + ++ + LK T FR++ V+ + + L
Sbjct: 98 IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGD-CQWITALH 156
Query: 332 YYFSNDEKL-LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
Y F ++ L LV + G+L + ++++P +R + V A++ +H
Sbjct: 157 YAFQDENHLYLVMDYYVGGDLLTLL---SKFEDKLP-EDMARFYIGEMVL-AIDSIH--- 208
Query: 391 KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYKSPEYQSSK-- 448
Q +H ++K N+LLD N + ++D+G + Q ++ +P+Y S +
Sbjct: 209 ----QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEIL 264
Query: 449 --------KISRKSDVWSFGCLLLELLTG 469
K + D WS G + E+L G
Sbjct: 265 QAMEDGMGKYGPECDWWSLGVCMYEMLYG 293
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 20/156 (12%)
Query: 323 HPNLLPLLAYYFSNDEKL-LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVAR 381
H + LAY F L LV G++ R H ++ F+ + +
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDI--RYHIYNVDEDNPGFQEPRAIFYTAQIVS 300
Query: 382 ALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMI---- 437
LE+LH ++ +I+ +LK N+LLDD+ V +SD G L + A Q
Sbjct: 301 GLEHLHQRN-------IIYRDLKPENVLLDDDGNVRISDLG---LAVELKAGQTKTKGYA 350
Query: 438 ---SYKSPEYQSSKKISRKSDVWSFGCLLLELLTGR 470
+ +PE ++ D ++ G L E++ R
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 5/97 (5%)
Query: 400 HGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQ-----RMISYKSPEYQSSKKISRKS 454
H ++K NIL+ ++ + D+G +S Q + Y +PE S + ++
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 455 DVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLR 491
D+++ C+L E LTG + GA + + R
Sbjct: 217 DIYALTCVLYECLTGSPPYQGDQLSVXGAHINQAIPR 253
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 25/140 (17%)
Query: 340 LLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVI 399
L+V + G LF+RI + F R + + + A++YLH + +
Sbjct: 135 LIVXECLDGGELFSRIQ----DRGDQAFTEREASEIXKSIGEAIQYLHSIN-------IA 183
Query: 400 HGNLKSTNILLDD---NEMVLVSDYGFSSLVAQPIAAQRMIS-------YKSPEYQSSKK 449
H ++K N+L N ++ ++D+GF A+ + ++ Y +PE +K
Sbjct: 184 HRDVKPENLLYTSKRPNAILKLTDFGF----AKETTSHNSLTTPCYTPYYVAPEVLGPEK 239
Query: 450 ISRKSDVWSFGCLLLELLTG 469
+ D WS G + LL G
Sbjct: 240 YDKSCDXWSLGVIXYILLCG 259
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 76/168 (45%), Gaps = 20/168 (11%)
Query: 309 EEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFR 368
EE +++ ++ H N++ L Y + + +L+ + G LF+ + + K +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEE 115
Query: 369 CRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM----VLVSDYGFS 424
+ + + + + YLH K + H +LK NI+L D + + + D+G +
Sbjct: 116 EATSFI--KQILDGVNYLHTK-------KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
Query: 425 SLVAQPIAAQRMI---SYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
+ + + + + +PE + + + ++D+WS G + LL+G
Sbjct: 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 73/168 (43%), Gaps = 20/168 (11%)
Query: 309 EEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFR 368
EE +++ ++ H N++ L Y + + +L+ + G LF+ + +S
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE----- 114
Query: 369 CRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM----VLVSDYGFS 424
+ + + YLH K + H +LK NI+L D + + + D+G +
Sbjct: 115 -EEATSFIKQILDGVNYLHTK-------KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
Query: 425 SLVAQPIAAQRMI---SYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
+ + + + + +PE + + + ++D+WS G + LL+G
Sbjct: 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 73/168 (43%), Gaps = 20/168 (11%)
Query: 309 EEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFR 368
EE +++ ++ H N++ L Y + + +L+ + G LF+ + +S
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE----- 114
Query: 369 CRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM----VLVSDYGFS 424
+ + + YLH K + H +LK NI+L D + + + D+G +
Sbjct: 115 -EEATSFIKQILDGVNYLHTK-------KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
Query: 425 SLVAQPIAAQRMI---SYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
+ + + + + +PE + + + ++D+WS G + LL+G
Sbjct: 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 76/168 (45%), Gaps = 20/168 (11%)
Query: 309 EEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFR 368
EE +++ ++ H N++ L Y + + +L+ + G LF+ + + K +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEE 115
Query: 369 CRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM----VLVSDYGFS 424
+ + + + + YLH K + H +LK NI+L D + + + D+G +
Sbjct: 116 EATSFI--KQILDGVNYLHTK-------KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
Query: 425 SLVAQPIAAQRMI---SYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
+ + + + + +PE + + + ++D+WS G + LL+G
Sbjct: 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 74/168 (44%), Gaps = 20/168 (11%)
Query: 309 EEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFR 368
EE +++ ++ H N++ L Y + + +L+ + G LF+ + +S
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 369 CRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM----VLVSDYGFS 424
++L + YLH K + H +LK NI+L D + + + D+G +
Sbjct: 120 FIKQIL------DGVNYLHTK-------KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
Query: 425 SLVAQPIAAQRMI---SYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
+ + + + + +PE + + + ++D+WS G + LL+G
Sbjct: 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 395 QSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS---YKSPE-YQSSKKI 450
++ V+H +L NILL DN + + D+ + ++ Y++PE K
Sbjct: 152 EAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGF 211
Query: 451 SRKSDVWSFGCLLLELL 467
++ D+WS GC++ E+
Sbjct: 212 TKLVDMWSAGCVMAEMF 228
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 395 QSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMIS---YKSPE-YQSSKKI 450
++ V+H +L NILL DN + + D+ + ++ Y++PE K
Sbjct: 152 EAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGF 211
Query: 451 SRKSDVWSFGCLLLELL 467
++ D+WS GC++ E+
Sbjct: 212 TKLVDMWSAGCVMAEMF 228
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 75/206 (36%), Gaps = 23/206 (11%)
Query: 274 EGLGKGIFG---NSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLL 330
E LGKG F K L + + L ++ ++ + KHPN++ L
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 87
Query: 331 AYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD 390
L++ G LF I + C ++L A+ + H
Sbjct: 88 DSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQIL------EAVLHCH--- 138
Query: 391 KSRTQSAVIHGNLKSTNILLDD---NEMVLVSDYGFSSLVAQPIAAQRMIS----YKSPE 443
Q V+H +LK N+LL V ++D+G + V A + Y SPE
Sbjct: 139 ----QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPE 194
Query: 444 YQSSKKISRKSDVWSFGCLLLELLTG 469
+ D+W+ G +L LL G
Sbjct: 195 VLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 50/102 (49%), Gaps = 13/102 (12%)
Query: 375 VARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILL---DDNEMVL---VSDYGFSSLVA 428
+++ + L+Y+H + +IH ++K N+L+ D E ++ ++D G +
Sbjct: 136 ISKQLLLGLDYMHRR------CGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD 189
Query: 429 QPIA-AQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
+ + + Y+SPE +D+WS CL+ EL+TG
Sbjct: 190 EHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 50/102 (49%), Gaps = 13/102 (12%)
Query: 375 VARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILL---DDNEMVL---VSDYGFSSLVA 428
+++ + L+Y+H + +IH ++K N+L+ D E ++ ++D G +
Sbjct: 136 ISKQLLLGLDYMHRR------CGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD 189
Query: 429 QPIA-AQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTG 469
+ + + Y+SPE +D+WS CL+ EL+TG
Sbjct: 190 EHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 90/209 (43%), Gaps = 35/209 (16%)
Query: 276 LGKGIFGNSYKAL-LEGRAPVVVKRLRDLKPLITEE------FRKQLLVIADQKHPNLLP 328
LG+G +G YKA+ V +KR+R L EE +++ ++ + +H N++
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIR----LEHEEEGVPGTAIREVSLLKELQHRNIIE 97
Query: 329 LLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH 388
L + N L++++A N +L + R+ +L+ + + H
Sbjct: 98 LKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLI------NGVNFCHS 150
Query: 389 KDKSRTQSAVIHGNLKSTNILL-----DDNEMVLVSDYGFSSLVAQPIA--AQRMIS--Y 439
+ +H +LK N+LL + ++ + D+G + PI +I+ Y
Sbjct: 151 R-------RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWY 203
Query: 440 KSPE-YQSSKKISRKSDVWSFGCLLLELL 467
+ PE S+ S D+WS C+ E+L
Sbjct: 204 RPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 18/156 (11%)
Query: 277 GKGIFGNSYKA-LLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYY-- 333
+G FG +KA LL V + ++D + E ++ + KH N+L +
Sbjct: 33 ARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNE---YEVYSLPGMKHENILQFIGAEKR 89
Query: 334 -FSNDEKL-LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKD- 390
S D L L+ F G+L + + S N + C +A +AR L YLH
Sbjct: 90 GTSVDVDLWLITAFHEKGSLSDFLKANVVSWNEL---CH----IAETMARGLAYLHEDIP 142
Query: 391 --KSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS 424
K + A+ H ++KS N+LL +N ++D+G +
Sbjct: 143 GLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA 178
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 82/174 (47%), Gaps = 29/174 (16%)
Query: 309 EEFRKQLLVIADQKHPNLLPLLAYY--FSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIP 366
E+ +++ ++ HPN++ L+ + D +V++ G + S+++
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQAR 140
Query: 367 FRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS-- 424
F + + + +EYLH++ +IH ++K +N+L+ ++ + ++D+G S
Sbjct: 141 FYFQD-------LIKGIEYLHYQ-------KIIHRDIKPSNLLVGEDGHIKIADFGVSNE 186
Query: 425 -----SLVAQPIAAQRMISYKSPEYQS-SKKI--SRKSDVWSFGCLLLELLTGR 470
+L++ + ++ +PE S ++KI + DVW+ G L + G+
Sbjct: 187 FKGSDALLSNTVGTP---AFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 51/121 (42%), Gaps = 37/121 (30%)
Query: 379 VARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDN--EMVLVS----------------- 419
+ +AL YL + ++ H +LK NILLDD E L++
Sbjct: 146 ILKALNYLR-------KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKS 198
Query: 420 ------DYG---FSSLVAQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGR 470
D+G F S I R Y++PE + SD+WSFGC+L EL TG
Sbjct: 199 TGIKLIDFGCATFKSDYHGSIINTR--QYRAPEVILNLGWDVSSDMWSFGCVLAELYTGS 256
Query: 471 I 471
+
Sbjct: 257 L 257
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 92/211 (43%), Gaps = 48/211 (22%)
Query: 344 KFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNL 403
++ N L++ IH ++ R + RL R + AL Y+H + +IH +L
Sbjct: 95 EYCENRTLYDLIHSENLNQQRDEY---WRLF--RQILEALSYIHSQ-------GIIHRDL 142
Query: 404 KSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYKSP-------------EYQSSKKI 450
K NI +D++ V + D+G + V + + ++ S P Y +++ +
Sbjct: 143 KPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVL 202
Query: 451 ------SRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDS 504
+ K D++S G + E++ + G+ ++ LR+V E+ + D+
Sbjct: 203 DGTGHYNEKIDMYSLGIIFFEMI------YPFSTGMERVNILK-KLRSVSIEFPPDFDDN 255
Query: 505 EISVQRSAAHGMLKLLQVAIQCCNKSPEKRP 535
++ V++ +++LL + P KRP
Sbjct: 256 KMKVEKK----IIRLL------IDHDPNKRP 276
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 397 AVIHGNLKSTNILLDDN--EMVLVSDYGFSSLVAQPIAA--QRMISYKSPEY-QSSKKIS 451
V+H ++K NIL+D N E+ L+ D+G +L+ + Y PE+ + +
Sbjct: 133 GVLHRDIKDENILIDLNRGELKLI-DFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 191
Query: 452 RKSDVWSFGCLLLELLTGRISTHSAPQGING 482
R + VWS G LL +++ G I + I G
Sbjct: 192 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 222
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 397 AVIHGNLKSTNILLDDN--EMVLVSDYGFSSLVAQPIAA--QRMISYKSPEY-QSSKKIS 451
V+H ++K NIL+D N E+ L+ D+G +L+ + Y PE+ + +
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLI-DFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 188
Query: 452 RKSDVWSFGCLLLELLTGRISTHSAPQGING 482
R + VWS G LL +++ G I + I G
Sbjct: 189 RSAAVWSLGILLYDMVCGDIPFEHDEEIIGG 219
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 397 AVIHGNLKSTNILLDDN--EMVLVSDYGFSSLVAQPIAA--QRMISYKSPEY-QSSKKIS 451
V+H ++K NIL+D N E+ L+ D+G +L+ + Y PE+ + +
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLI-DFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 188
Query: 452 RKSDVWSFGCLLLELLTGRISTHSAPQGING 482
R + VWS G LL +++ G I + I G
Sbjct: 189 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 219
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 397 AVIHGNLKSTNILLDDN--EMVLVSDYGFSSLVAQPIAA--QRMISYKSPEY-QSSKKIS 451
V+H ++K NIL+D N E+ L+ D+G +L+ + Y PE+ + +
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLI-DFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 188
Query: 452 RKSDVWSFGCLLLELLTGRISTHSAPQGING 482
R + VWS G LL +++ G I + I G
Sbjct: 189 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 219
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 397 AVIHGNLKSTNILLDDN--EMVLVSDYGFSSLVAQPIAA--QRMISYKSPEY-QSSKKIS 451
V+H ++K NIL+D N E+ L+ D+G +L+ + Y PE+ + +
Sbjct: 134 GVLHRDIKDENILIDLNRGELKLI-DFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 192
Query: 452 RKSDVWSFGCLLLELLTGRISTHSAPQGING 482
R + VWS G LL +++ G I + I G
Sbjct: 193 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 223
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 397 AVIHGNLKSTNILLDDN--EMVLVSDYGFSSLVAQPIAA--QRMISYKSPEY-QSSKKIS 451
V+H ++K NIL+D N E+ L+ D+G +L+ + Y PE+ + +
Sbjct: 134 GVLHRDIKDENILIDLNRGELKLI-DFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 192
Query: 452 RKSDVWSFGCLLLELLTGRISTHSAPQGING 482
R + VWS G LL +++ G I + I G
Sbjct: 193 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 223
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 397 AVIHGNLKSTNILLDDN--EMVLVSDYGFSSLVAQPIAA--QRMISYKSPEY-QSSKKIS 451
V+H ++K NIL+D N E+ L+ D+G +L+ + Y PE+ + +
Sbjct: 157 GVLHRDIKDENILIDLNRGELKLI-DFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 215
Query: 452 RKSDVWSFGCLLLELLTGRISTHSAPQGING 482
R + VWS G LL +++ G I + I G
Sbjct: 216 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 246
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 397 AVIHGNLKSTNILLDDN--EMVLVSDYGFSSLVAQPIAA--QRMISYKSPEY-QSSKKIS 451
V+H ++K NIL+D N E+ L+ D+G +L+ + Y PE+ + +
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLI-DFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 193
Query: 452 RKSDVWSFGCLLLELLTGRISTHSAPQGING 482
R + VWS G LL +++ G I + I G
Sbjct: 194 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 224
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 397 AVIHGNLKSTNILLDDN--EMVLVSDYGFSSLVAQPIAA--QRMISYKSPEY-QSSKKIS 451
V+H ++K NIL+D N E+ L+ D+G +L+ + Y PE+ + +
Sbjct: 177 GVLHRDIKDENILIDLNRGELKLI-DFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 235
Query: 452 RKSDVWSFGCLLLELLTGRISTHSAPQGING 482
R + VWS G LL +++ G I + I G
Sbjct: 236 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 266
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 397 AVIHGNLKSTNILLDDN--EMVLVSDYGFSSLVAQPIAA--QRMISYKSPEY-QSSKKIS 451
V+H ++K NIL+D N E+ L+ D+G +L+ + Y PE+ + +
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLI-DFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 208
Query: 452 RKSDVWSFGCLLLELLTGRISTHSAPQGING 482
R + VWS G LL +++ G I + I G
Sbjct: 209 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 239
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 397 AVIHGNLKSTNILLDDN--EMVLVSDYGFSSLVAQPIAA--QRMISYKSPEY-QSSKKIS 451
V+H ++K NIL+D N E+ L+ D+G +L+ + Y PE+ + +
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLI-DFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 193
Query: 452 RKSDVWSFGCLLLELLTGRISTHSAPQGING 482
R + VWS G LL +++ G I + I G
Sbjct: 194 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 224
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 33/168 (19%)
Query: 321 QKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVA 380
Q+H + + L Y D+ + + GN +L + + K K+ P+ +S + +
Sbjct: 112 QQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWL---KKKKSIDPWERKSYW---KNML 165
Query: 381 RALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM---- 436
A+ +H Q ++H +LK N L+ D + L+ D+G ++ + QP +
Sbjct: 166 EAVHTIH-------QHGIVHSDLKPANFLIVDGMLKLI-DFGIANQM-QPDTTSVVKDSQ 216
Query: 437 ---ISYKSPEYQSSKKISRKS-----------DVWSFGCLLLELLTGR 470
++Y PE SR++ DVWS GC+L + G+
Sbjct: 217 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 33/168 (19%)
Query: 321 QKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVA 380
Q+H + + L Y D+ + + GN +L + + K K+ P+ +S + +
Sbjct: 84 QQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWL---KKKKSIDPWERKSYW---KNML 137
Query: 381 RALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRM---- 436
A+ +H Q ++H +LK N L+ D + L+ D+G ++ + QP +
Sbjct: 138 EAVHTIH-------QHGIVHSDLKPANFLIVDGMLKLI-DFGIANQM-QPDTTSVVKDSQ 188
Query: 437 ---ISYKSPEYQSSKKISRKS-----------DVWSFGCLLLELLTGR 470
++Y PE SR++ DVWS GC+L + G+
Sbjct: 189 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 397 AVIHGNLKSTNILLDDN--EMVLVSDYGFSSLVAQPIAA--QRMISYKSPEY-QSSKKIS 451
V+H ++K NIL+D N E+ L+ D+G +L+ + Y PE+ + +
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLI-DFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 208
Query: 452 RKSDVWSFGCLLLELLTGRISTHSAPQGING 482
R + VWS G LL +++ G I + I G
Sbjct: 209 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 239
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 397 AVIHGNLKSTNILLDDN--EMVLVSDYGFSSLVAQPIAA--QRMISYKSPEY-QSSKKIS 451
V+H ++K NIL+D N E+ L+ D+G +L+ + Y PE+ + +
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLI-DFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHG 220
Query: 452 RKSDVWSFGCLLLELLTGRISTHSAPQGING 482
R + VWS G LL +++ G I + I G
Sbjct: 221 RSAAVWSLGILLYDMVCGDIPFEHDEEIIGG 251
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,703,099
Number of Sequences: 62578
Number of extensions: 615518
Number of successful extensions: 4021
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 505
Number of HSP's that attempted gapping in prelim test: 1997
Number of HSP's gapped (non-prelim): 1192
length of query: 582
length of database: 14,973,337
effective HSP length: 104
effective length of query: 478
effective length of database: 8,465,225
effective search space: 4046377550
effective search space used: 4046377550
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)