Query 047954
Match_columns 582
No_of_seqs 642 out of 3804
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 08:05:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047954.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047954hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoj_A High affinity nerve gro 100.0 3.6E-55 1.2E-59 445.4 22.0 254 272-550 45-320 (329)
2 4asz_A BDNF/NT-3 growth factor 100.0 1.4E-55 4.7E-60 442.4 17.6 253 272-549 17-289 (299)
3 4gt4_A Tyrosine-protein kinase 100.0 6.1E-55 2.1E-59 439.6 19.5 251 273-548 31-305 (308)
4 3omv_A RAF proto-oncogene seri 100.0 5.6E-54 1.9E-58 430.8 22.5 250 272-549 40-300 (307)
5 4b9d_A Serine/threonine-protei 100.0 4.9E-53 1.7E-57 430.0 18.3 247 273-548 29-282 (350)
6 3fpq_A Serine/threonine-protei 100.0 2.8E-52 9.5E-57 415.5 22.4 246 273-546 31-286 (290)
7 4fih_A Serine/threonine-protei 100.0 1.1E-52 3.9E-57 426.7 19.7 245 274-548 80-329 (346)
8 3hmm_A TGF-beta receptor type- 100.0 7.5E-53 2.6E-57 425.0 16.8 266 273-551 8-299 (303)
9 4ase_A Vascular endothelial gr 100.0 3.2E-52 1.1E-56 427.0 17.9 256 272-551 68-349 (353)
10 4g3f_A NF-kappa-beta-inducing 100.0 3.4E-52 1.2E-56 421.9 17.0 243 273-549 63-316 (336)
11 4fie_A Serine/threonine-protei 100.0 2E-51 7E-56 427.6 21.4 246 273-548 156-406 (423)
12 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.8E-51 9.6E-56 410.3 16.0 240 272-543 36-285 (311)
13 3hyh_A Carbon catabolite-derep 100.0 2.1E-50 7.3E-55 398.4 21.9 241 273-546 18-266 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 8.8E-51 3E-55 406.7 12.2 242 273-546 29-285 (304)
15 4g31_A Eukaryotic translation 100.0 2.3E-49 7.8E-54 397.8 20.5 244 273-546 10-283 (299)
16 4b99_A Mitogen-activated prote 100.0 3E-46 1E-50 389.3 22.5 257 273-548 59-350 (398)
17 4f9c_A Cell division cycle 7-r 100.0 4.7E-46 1.6E-50 383.7 21.5 253 273-546 26-356 (361)
18 3uto_A Twitchin; kinase, muscl 100.0 1.3E-45 4.6E-50 402.8 20.3 248 273-547 162-415 (573)
19 2qkw_B Protein kinase; three-h 100.0 1.2E-44 4.3E-49 369.0 23.0 268 273-551 44-317 (321)
20 3v5w_A G-protein coupled recep 100.0 5.5E-45 1.9E-49 395.8 19.8 245 273-546 194-453 (689)
21 3uim_A Brassinosteroid insensi 100.0 1.9E-44 6.5E-49 368.3 18.5 285 261-552 18-314 (326)
22 3s95_A LIMK-1, LIM domain kina 100.0 1.9E-43 6.5E-48 358.4 23.2 250 273-550 15-283 (310)
23 3fxz_A Serine/threonine-protei 100.0 3E-43 1E-47 354.8 21.9 246 273-548 25-275 (297)
24 2c30_A Serine/threonine-protei 100.0 9E-43 3.1E-47 355.3 25.2 246 274-549 51-301 (321)
25 2psq_A Fibroblast growth facto 100.0 2.5E-43 8.6E-48 366.4 20.2 255 272-551 85-366 (370)
26 3p86_A Serine/threonine-protei 100.0 5.2E-43 1.8E-47 355.1 21.4 254 272-551 41-300 (309)
27 3soc_A Activin receptor type-2 100.0 2.6E-43 9E-48 359.4 17.7 258 273-550 29-319 (322)
28 3fe3_A MAP/microtubule affinit 100.0 1.3E-42 4.4E-47 354.9 22.6 244 273-548 20-270 (328)
29 4hcu_A Tyrosine-protein kinase 100.0 7.3E-43 2.5E-47 346.5 19.2 246 273-549 15-266 (269)
30 3kul_A Ephrin type-A receptor 100.0 5.4E-43 1.9E-47 357.5 18.6 248 273-550 54-314 (325)
31 1qcf_A Haematopoetic cell kina 100.0 7.6E-43 2.6E-47 372.9 19.1 251 272-553 192-448 (454)
32 2nru_A Interleukin-1 receptor- 100.0 3.2E-42 1.1E-46 348.6 22.5 272 261-549 13-306 (307)
33 3cbl_A C-FES, proto-oncogene t 100.0 2.4E-43 8.3E-48 367.7 13.8 248 272-549 118-374 (377)
34 3ugc_A Tyrosine-protein kinase 100.0 1.3E-42 4.5E-47 349.6 18.5 256 273-550 15-292 (295)
35 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.4E-42 4.7E-47 344.3 18.3 248 273-551 13-266 (268)
36 3zgw_A Maternal embryonic leuc 100.0 2.8E-42 9.6E-47 354.6 21.0 243 273-548 15-266 (347)
37 3gen_A Tyrosine-protein kinase 100.0 2.2E-42 7.6E-47 345.6 19.1 248 272-550 28-281 (283)
38 3q4u_A Activin receptor type-1 100.0 3.9E-42 1.3E-46 346.8 20.6 250 273-547 13-300 (301)
39 3tt0_A Basic fibroblast growth 100.0 3.7E-42 1.2E-46 359.4 21.0 259 272-555 73-358 (382)
40 1opk_A P150, C-ABL, proto-onco 100.0 1.4E-42 5E-47 374.4 18.0 251 272-552 224-481 (495)
41 2qol_A Ephrin receptor; recept 100.0 1.4E-42 4.9E-47 361.1 17.3 249 272-550 49-310 (373)
42 4fvq_A Tyrosine-protein kinase 100.0 1.7E-42 5.9E-47 347.4 17.3 247 273-550 13-276 (289)
43 1k9a_A Carboxyl-terminal SRC k 100.0 3.8E-42 1.3E-46 366.9 20.5 246 273-550 198-446 (450)
44 3tki_A Serine/threonine-protei 100.0 1.7E-42 5.9E-47 353.5 17.1 248 273-549 12-268 (323)
45 2yab_A Death-associated protei 100.0 7.8E-42 2.7E-46 353.4 22.0 247 273-547 17-277 (361)
46 3l9p_A Anaplastic lymphoma kin 100.0 1.4E-42 4.9E-47 360.5 16.5 254 273-551 76-347 (367)
47 3niz_A Rhodanese family protei 100.0 6.8E-42 2.3E-46 347.2 21.1 258 273-547 26-305 (311)
48 4euu_A Serine/threonine-protei 100.0 1.1E-41 3.8E-46 346.9 22.6 266 273-548 14-308 (319)
49 2izr_A Casein kinase I isoform 100.0 1.1E-41 3.9E-46 348.5 22.6 254 273-553 14-285 (330)
50 2x4f_A Myosin light chain kina 100.0 4.5E-42 1.5E-46 357.2 19.4 248 273-547 94-347 (373)
51 1o6l_A RAC-beta serine/threoni 100.0 2E-41 6.9E-46 347.1 23.7 242 273-546 10-264 (337)
52 3lb7_A RAF proto-oncogene seri 100.0 8.6E-42 2.9E-46 345.8 20.6 252 272-551 40-302 (307)
53 3op5_A Serine/threonine-protei 100.0 7.4E-42 2.5E-46 354.8 20.5 263 273-556 40-336 (364)
54 3qup_A Tyrosine-protein kinase 100.0 4.4E-42 1.5E-46 350.3 18.3 253 273-550 28-299 (323)
55 3poz_A Epidermal growth factor 100.0 4.5E-42 1.5E-46 351.1 18.1 246 273-549 20-278 (327)
56 1u5q_A Serine/threonine protei 100.0 1.1E-41 3.9E-46 350.9 20.9 248 273-550 59-313 (348)
57 2y0a_A Death-associated protei 100.0 1.6E-41 5.5E-46 346.8 21.8 248 272-547 15-276 (326)
58 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 3.4E-42 1.2E-46 367.5 17.3 250 272-552 188-443 (452)
59 1tki_A Titin; serine kinase, m 100.0 1.5E-41 5.1E-46 346.2 21.0 249 273-549 10-264 (321)
60 4eqm_A Protein kinase; transfe 100.0 2.4E-41 8.3E-46 340.3 21.7 254 273-553 16-279 (294)
61 1csn_A Casein kinase-1; phosph 100.0 3.1E-41 1.1E-45 339.7 22.4 256 273-554 15-288 (298)
62 3kn6_A Ribosomal protein S6 ki 100.0 1.1E-41 3.8E-46 347.8 19.3 252 273-548 16-276 (325)
63 2eva_A TAK1 kinase - TAB1 chim 100.0 2.2E-41 7.6E-46 342.8 21.0 253 273-553 13-267 (307)
64 2ivs_A Proto-oncogene tyrosine 100.0 9.7E-42 3.3E-46 346.0 18.3 254 272-550 27-312 (314)
65 1luf_A Muscle-specific tyrosin 100.0 7E-42 2.4E-46 351.7 17.4 254 273-551 52-337 (343)
66 3t9t_A Tyrosine-protein kinase 100.0 1.1E-41 3.9E-46 337.3 18.3 246 273-549 13-264 (267)
67 1mp8_A Focal adhesion kinase 1 100.0 6.1E-42 2.1E-46 342.3 16.2 248 272-550 19-277 (281)
68 1kob_A Twitchin; kinase, intra 100.0 1.8E-41 6E-46 353.9 20.3 248 273-547 56-309 (387)
69 3dtc_A Mitogen-activated prote 100.0 2.3E-41 7.7E-46 336.0 20.0 246 273-547 12-271 (271)
70 3vhe_A Vascular endothelial gr 100.0 6E-42 2.1E-46 354.5 16.4 253 273-549 27-355 (359)
71 3qd2_B Eukaryotic translation 100.0 3.5E-41 1.2E-45 344.5 21.5 243 273-545 11-328 (332)
72 3gni_B Strad alpha; kinase fol 100.0 2.8E-41 9.6E-46 353.7 21.3 262 273-548 30-339 (389)
73 2bdw_A Hypothetical protein K1 100.0 4.2E-41 1.4E-45 348.6 22.4 246 273-546 34-288 (362)
74 2zv2_A Calcium/calmodulin-depe 100.0 3.1E-41 1.1E-45 340.1 20.7 243 273-546 18-296 (298)
75 3soa_A Calcium/calmodulin-depe 100.0 3.3E-41 1.1E-45 357.9 21.8 247 273-547 16-272 (444)
76 3pls_A Macrophage-stimulating 100.0 4.7E-41 1.6E-45 338.4 21.9 252 272-552 25-290 (298)
77 3kmu_A ILK, integrin-linked ki 100.0 3.3E-41 1.1E-45 334.4 20.4 249 273-549 15-270 (271)
78 3c0i_A Peripheral plasma membr 100.0 2.5E-41 8.5E-46 349.0 20.1 251 272-547 28-291 (351)
79 3c1x_A Hepatocyte growth facto 100.0 1.4E-41 4.9E-46 353.3 18.3 251 272-552 93-358 (373)
80 1fot_A TPK1 delta, CAMP-depend 100.0 5.2E-41 1.8E-45 341.5 22.0 243 273-547 11-263 (318)
81 4f0f_A Serine/threonine-protei 100.0 1.2E-40 4E-45 333.8 24.1 248 273-547 24-287 (287)
82 2pvf_A Fibroblast growth facto 100.0 2.2E-41 7.6E-46 346.9 19.2 256 272-552 39-321 (334)
83 1mqb_A Ephrin type-A receptor 100.0 3.3E-41 1.1E-45 345.5 20.4 250 273-552 49-312 (333)
84 1ob3_A PFPK5, cell division co 100.0 2.1E-41 7.3E-46 339.6 18.5 257 273-546 7-284 (288)
85 4dc2_A Protein kinase C IOTA t 100.0 2.8E-41 9.7E-46 352.6 20.1 250 273-546 57-322 (396)
86 1t46_A HOMO sapiens V-KIT hard 100.0 2.9E-41 1E-45 342.4 19.5 254 272-549 27-307 (313)
87 3brb_A Proto-oncogene tyrosine 100.0 3.6E-41 1.2E-45 342.0 20.2 253 272-549 38-308 (313)
88 3mdy_A Bone morphogenetic prot 100.0 1.1E-40 3.9E-45 341.7 24.0 261 273-551 42-333 (337)
89 2h8h_A Proto-oncogene tyrosine 100.0 8.8E-42 3E-46 371.6 16.5 250 272-552 271-526 (535)
90 3p1a_A MYT1 kinase, membrane-a 100.0 2.6E-41 9E-46 342.9 18.9 240 273-546 62-308 (311)
91 3lxl_A Tyrosine-protein kinase 100.0 1.2E-41 4.1E-46 347.8 16.4 260 273-554 28-308 (327)
92 2ozo_A Tyrosine-protein kinase 100.0 2.5E-41 8.4E-46 373.4 20.0 245 275-550 343-599 (613)
93 1nxk_A MAP kinase-activated pr 100.0 7.6E-41 2.6E-45 351.2 22.7 249 273-548 67-327 (400)
94 3uc3_A Serine/threonine-protei 100.0 4.5E-41 1.5E-45 348.3 20.5 250 273-549 25-281 (361)
95 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.6E-41 5.6E-46 350.0 17.2 242 273-546 28-284 (353)
96 2pmi_A Negative RE, cyclin-dep 100.0 6.1E-41 2.1E-45 341.1 21.2 264 273-548 10-299 (317)
97 3ork_A Serine/threonine protei 100.0 1.2E-41 4E-46 345.5 15.7 246 273-546 17-277 (311)
98 3kex_A Receptor tyrosine-prote 100.0 1.8E-41 6E-46 346.4 17.0 246 273-549 18-276 (325)
99 3h4j_B AMPK kdaid, SNF1-like p 100.0 2E-41 7E-46 346.8 17.5 243 273-548 14-264 (336)
100 1rjb_A FL cytokine receptor; k 100.0 3.3E-41 1.1E-45 347.0 18.9 257 272-552 49-337 (344)
101 1u59_A Tyrosine-protein kinase 100.0 3.9E-41 1.3E-45 337.4 18.9 247 274-551 16-274 (287)
102 2ac3_A MAP kinase-interacting 100.0 1.5E-41 5.1E-46 345.2 16.0 255 273-547 18-300 (316)
103 3kfa_A Tyrosine-protein kinase 100.0 1.8E-41 6.1E-46 339.9 16.2 251 272-552 17-274 (288)
104 3lzb_A Epidermal growth factor 100.0 4.5E-41 1.5E-45 343.6 19.0 246 273-549 20-278 (327)
105 3gxj_A TGF-beta receptor type- 100.0 1.7E-42 5.7E-47 349.7 8.2 254 273-552 8-300 (303)
106 3dbq_A Dual specificity protei 100.0 6.2E-41 2.1E-45 345.0 20.0 245 273-548 14-279 (343)
107 3a62_A Ribosomal protein S6 ki 100.0 1.3E-40 4.6E-45 340.1 21.9 243 273-547 22-281 (327)
108 3a8x_A Protein kinase C IOTA t 100.0 1.1E-40 3.8E-45 343.0 21.2 250 273-546 14-279 (345)
109 4aw2_A Serine/threonine-protei 100.0 1.9E-41 6.3E-46 358.6 15.7 249 273-547 79-343 (437)
110 1rdq_E PKA C-alpha, CAMP-depen 100.0 7.1E-41 2.4E-45 345.0 19.6 243 273-547 46-298 (350)
111 2w4o_A Calcium/calmodulin-depe 100.0 6.1E-41 2.1E-45 345.7 19.1 247 273-548 58-311 (349)
112 4fr4_A YANK1, serine/threonine 100.0 1E-40 3.4E-45 347.2 20.8 245 273-546 20-275 (384)
113 3v8s_A RHO-associated protein 100.0 2.6E-41 8.9E-46 354.8 16.4 247 273-548 74-335 (410)
114 1xjd_A Protein kinase C, theta 100.0 4E-41 1.4E-45 345.9 17.2 242 273-546 22-273 (345)
115 3o0g_A Cell division protein k 100.0 1E-40 3.4E-45 335.3 19.7 258 273-546 7-286 (292)
116 3f66_A Hepatocyte growth facto 100.0 1.1E-40 3.8E-45 335.9 19.8 251 272-552 29-294 (298)
117 2buj_A Serine/threonine-protei 100.0 7.2E-41 2.5E-45 340.3 18.5 255 273-552 34-309 (317)
118 2zmd_A Dual specificity protei 100.0 1.4E-40 4.9E-45 348.1 21.2 245 273-548 61-326 (390)
119 3og7_A AKAP9-BRAF fusion prote 100.0 8.8E-41 3E-45 335.3 18.7 249 273-549 29-288 (289)
120 4e5w_A Tyrosine-protein kinase 100.0 7.9E-41 2.7E-45 337.5 18.4 254 273-548 26-301 (302)
121 2a2a_A Death-associated protei 100.0 3.1E-40 1.1E-44 336.5 22.6 248 272-547 16-277 (321)
122 3hko_A Calcium/calmodulin-depe 100.0 1.8E-40 6.3E-45 341.5 21.1 254 273-548 31-336 (345)
123 3uzp_A CKI-delta, CKID, casein 100.0 5.9E-40 2E-44 330.0 24.3 257 273-555 14-286 (296)
124 3cc6_A Protein tyrosine kinase 100.0 1.1E-40 3.8E-45 333.1 18.7 248 272-550 16-274 (281)
125 3f3z_A Calcium/calmodulin-depe 100.0 1.8E-40 6.2E-45 330.7 20.1 247 273-548 14-267 (277)
126 1p4o_A Insulin-like growth fac 100.0 6.4E-41 2.2E-45 341.5 17.1 255 272-551 29-301 (322)
127 1qpc_A LCK kinase; alpha beta 100.0 4.9E-41 1.7E-45 335.1 15.8 248 273-551 18-271 (279)
128 1x8b_A WEE1HU, WEE1-like prote 100.0 7.7E-41 2.6E-45 334.7 17.2 246 273-548 16-285 (289)
129 4fl3_A Tyrosine-protein kinase 100.0 5.9E-41 2E-45 371.4 17.6 243 274-548 375-630 (635)
130 2a19_B Interferon-induced, dou 100.0 1.4E-40 4.8E-45 332.3 18.7 242 273-552 16-277 (284)
131 3g33_A Cell division protein k 100.0 2.9E-41 1E-45 341.9 13.9 260 273-548 14-302 (308)
132 3lm5_A Serine/threonine-protei 100.0 2.6E-40 9E-45 338.0 20.9 250 273-548 34-293 (327)
133 3llt_A Serine/threonine kinase 100.0 3.5E-40 1.2E-44 341.6 22.2 255 273-545 40-358 (360)
134 2v62_A Serine/threonine-protei 100.0 1.2E-40 4.1E-45 343.1 18.5 255 273-549 42-328 (345)
135 2i0e_A Protein kinase C-beta I 100.0 2.5E-40 8.4E-45 341.1 20.7 242 273-546 25-280 (353)
136 1b6c_B TGF-B superfamily recep 100.0 3.5E-40 1.2E-44 338.8 21.7 254 273-551 47-338 (342)
137 2acx_A G protein-coupled recep 100.0 1.3E-40 4.6E-45 360.6 19.4 249 273-547 189-449 (576)
138 3is5_A Calcium-dependent prote 100.0 2.3E-40 7.8E-45 331.6 19.7 248 273-546 27-282 (285)
139 2y94_A 5'-AMP-activated protei 100.0 2.5E-40 8.4E-45 353.5 21.1 243 273-547 21-271 (476)
140 3ll6_A Cyclin G-associated kin 100.0 6.1E-41 2.1E-45 343.4 15.7 251 272-552 32-311 (337)
141 4ejn_A RAC-alpha serine/threon 100.0 1.1E-40 3.7E-45 355.5 17.8 244 273-548 153-410 (446)
142 2eue_A Carbon catabolite derep 100.0 3E-40 1E-44 328.8 19.9 242 273-547 18-267 (275)
143 2jam_A Calcium/calmodulin-depe 100.0 5.2E-40 1.8E-44 332.1 21.8 248 273-548 14-267 (304)
144 3dls_A PAS domain-containing s 100.0 7.3E-41 2.5E-45 343.2 15.7 238 273-548 29-280 (335)
145 3lxp_A Non-receptor tyrosine-p 100.0 1.4E-40 4.9E-45 338.5 17.8 255 273-551 36-312 (318)
146 3kk8_A Calcium/calmodulin depe 100.0 7.8E-40 2.7E-44 327.2 22.7 249 273-549 11-268 (284)
147 3cok_A Serine/threonine-protei 100.0 3E-40 1E-44 329.3 19.6 245 273-548 16-268 (278)
148 2wqm_A Serine/threonine-protei 100.0 3.8E-40 1.3E-44 334.0 20.6 256 273-552 37-300 (310)
149 4agu_A Cyclin-dependent kinase 100.0 3.7E-40 1.3E-44 334.1 20.4 259 273-548 8-290 (311)
150 4eut_A Serine/threonine-protei 100.0 1.2E-40 4E-45 349.7 17.2 268 273-550 14-310 (396)
151 4hgt_A Casein kinase I isoform 100.0 8.1E-40 2.8E-44 328.9 22.6 256 273-554 14-285 (296)
152 2w1i_A JAK2; chromosomal rearr 100.0 1.9E-40 6.4E-45 338.9 18.2 256 272-549 45-322 (326)
153 1xbb_A Tyrosine-protein kinase 100.0 1.8E-40 6E-45 333.4 17.7 244 275-550 24-280 (291)
154 2clq_A Mitogen-activated prote 100.0 4.5E-40 1.6E-44 330.7 20.6 249 274-548 28-284 (295)
155 2xir_A Vascular endothelial gr 100.0 1.6E-40 5.6E-45 337.3 17.5 254 273-550 32-311 (316)
156 2jii_A Serine/threonine-protei 100.0 8.6E-41 2.9E-45 345.2 15.5 257 273-554 47-341 (352)
157 3fdn_A Serine/threonine-protei 100.0 3.8E-40 1.3E-44 328.8 19.7 244 273-548 14-263 (279)
158 2rku_A Serine/threonine-protei 100.0 7.8E-40 2.7E-44 329.1 22.0 245 273-549 20-272 (294)
159 3oz6_A Mitogen-activated prote 100.0 4.4E-40 1.5E-44 344.4 21.0 256 273-547 14-333 (388)
160 2vd5_A DMPK protein; serine/th 100.0 3.4E-41 1.1E-45 354.1 12.5 247 273-546 66-331 (412)
161 2h34_A Serine/threonine-protei 100.0 1E-39 3.5E-44 330.9 22.9 250 273-552 39-299 (309)
162 3mtl_A Cell division protein k 100.0 3.3E-41 1.1E-45 344.2 11.9 263 273-552 7-291 (324)
163 2yex_A Serine/threonine-protei 100.0 5.5E-40 1.9E-44 326.8 20.5 246 273-547 12-266 (276)
164 1t4h_A Serine/threonine-protei 100.0 1E-39 3.5E-44 327.6 22.6 246 273-546 31-286 (290)
165 3eqc_A Dual specificity mitoge 100.0 9.5E-41 3.2E-45 345.9 15.5 260 273-549 38-331 (360)
166 1byg_A CSK, protein (C-termina 100.0 7.1E-41 2.4E-45 333.9 13.9 246 273-550 26-274 (278)
167 3byv_A Rhoptry kinase; malaria 100.0 1.8E-41 6E-46 353.7 9.8 242 273-546 78-363 (377)
168 3ttj_A Mitogen-activated prote 100.0 2.1E-40 7.3E-45 354.2 18.3 255 273-547 67-360 (464)
169 2owb_A Serine/threonine-protei 100.0 6.6E-40 2.3E-44 336.1 21.3 245 273-549 46-298 (335)
170 3a7i_A MST3 kinase, serine/thr 100.0 4.9E-40 1.7E-44 332.1 19.8 248 273-552 27-280 (303)
171 3g2f_A Bone morphogenetic prot 100.0 5.4E-40 1.8E-44 336.7 20.3 268 273-554 18-323 (336)
172 2yfx_A Tyrosine-protein kinase 100.0 2E-40 6.9E-45 338.8 16.9 254 273-551 35-306 (327)
173 3i6u_A CDS1, serine/threonine- 100.0 1.7E-40 5.9E-45 350.8 16.9 247 273-547 140-404 (419)
174 2i1m_A Macrophage colony-stimu 100.0 8.8E-41 3E-45 342.2 14.2 254 273-550 51-327 (333)
175 1fvr_A Tyrosine-protein kinase 100.0 2.5E-40 8.7E-45 338.0 17.5 255 273-552 30-303 (327)
176 3bhy_A Death-associated protei 100.0 9.7E-40 3.3E-44 326.4 21.3 246 273-546 10-269 (283)
177 2j7t_A Serine/threonine-protei 100.0 5.8E-40 2E-44 331.2 19.2 248 273-548 24-281 (302)
178 3c4z_A Rhodopsin kinase; Ser/T 100.0 7.2E-40 2.4E-44 354.0 20.3 250 274-547 191-453 (543)
179 3rgf_A Cyclin-dependent kinase 100.0 1.7E-39 5.9E-44 341.9 22.4 274 264-548 17-339 (405)
180 3nyv_A Calmodulin-domain prote 100.0 1.1E-39 3.9E-44 351.4 21.5 247 273-548 31-287 (484)
181 3sv0_A Casein kinase I-like; t 100.0 1.6E-39 5.5E-44 347.8 22.4 254 273-552 12-281 (483)
182 3q60_A ROP5B; pseudokinase, tr 100.0 1E-40 3.5E-45 347.2 12.7 251 273-547 67-357 (371)
183 3mwu_A Calmodulin-domain prote 100.0 2.7E-39 9.1E-44 348.6 24.1 248 273-549 27-283 (486)
184 3rp9_A Mitogen-activated prote 100.0 4.4E-40 1.5E-44 352.1 17.8 183 273-469 58-280 (458)
185 1cm8_A Phosphorylated MAP kina 100.0 2.7E-39 9.1E-44 335.8 22.9 257 273-548 30-313 (367)
186 2qr7_A Ribosomal protein S6 ki 100.0 6.4E-40 2.2E-44 336.9 17.5 247 273-548 27-283 (342)
187 4aaa_A Cyclin-dependent kinase 100.0 9.5E-40 3.2E-44 334.4 18.5 259 273-548 30-312 (331)
188 3gbz_A Kinase, CMGC CDK; ssgci 100.0 7.6E-40 2.6E-44 334.8 17.8 256 273-547 39-323 (329)
189 3nsz_A CK II alpha, casein kin 100.0 2E-39 6.7E-44 331.6 20.8 254 273-548 41-325 (330)
190 2y7j_A Phosphorylase B kinase 100.0 1.8E-39 6.1E-44 336.9 20.8 246 273-546 99-363 (365)
191 3lij_A Calcium/calmodulin depe 100.0 1.7E-39 5.7E-44 350.8 21.3 246 273-547 42-296 (494)
192 2r5t_A Serine/threonine-protei 100.0 1E-39 3.4E-44 339.0 18.8 241 273-545 43-296 (373)
193 1vzo_A Ribosomal protein S6 ki 100.0 4E-40 1.4E-44 340.5 15.7 248 273-548 59-327 (355)
194 2w5a_A Serine/threonine-protei 100.0 4.6E-40 1.6E-44 328.0 15.5 255 273-549 11-274 (279)
195 2vgo_A Serine/threonine-protei 100.0 2.2E-39 7.5E-44 324.1 20.3 244 273-548 19-268 (284)
196 2h6d_A 5'-AMP-activated protei 100.0 3.5E-39 1.2E-43 321.1 21.4 243 273-547 16-266 (276)
197 1u46_A ACK-1, activated CDC42 100.0 6.6E-40 2.2E-44 328.8 15.9 249 273-551 23-286 (291)
198 3fme_A Dual specificity mitoge 100.0 1.1E-39 3.9E-44 326.9 17.6 250 273-548 12-272 (290)
199 3com_A Serine/threonine-protei 100.0 4.6E-39 1.6E-43 326.6 22.2 246 273-548 34-284 (314)
200 3kvw_A DYRK2, dual specificity 100.0 1.6E-39 5.3E-44 344.5 19.4 259 273-548 102-414 (429)
201 2y4i_B KSR2, HKSR2, kinase sup 100.0 5.5E-40 1.9E-44 334.0 15.2 250 272-553 37-306 (319)
202 1ua2_A CAK, cell division prot 100.0 9.5E-40 3.2E-44 336.5 16.8 259 273-548 15-297 (346)
203 3an0_A Dual specificity mitoge 100.0 2.8E-39 9.7E-44 332.0 20.1 252 273-550 56-318 (340)
204 1wak_A Serine/threonine-protei 100.0 1.7E-39 5.7E-44 340.6 18.7 261 273-546 42-395 (397)
205 3pg1_A Mitogen-activated prote 100.0 3.9E-39 1.3E-43 334.0 21.2 257 273-548 27-322 (362)
206 2ycf_A Serine/threonine-protei 100.0 4.7E-40 1.6E-44 335.3 13.9 247 273-547 15-279 (322)
207 3n9x_A Phosphotransferase; mal 100.0 5.2E-39 1.8E-43 340.9 22.4 188 273-474 31-253 (432)
208 3q5i_A Protein kinase; CDPK, m 100.0 3E-39 1E-43 349.7 20.9 248 273-549 41-308 (504)
209 3fhr_A MAP kinase-activated pr 100.0 2.3E-39 8E-44 332.2 18.8 262 261-548 22-293 (336)
210 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.2E-39 3.9E-44 338.4 16.4 243 273-549 70-339 (365)
211 3mi9_A Cell division protein k 100.0 6E-39 2E-43 331.2 21.5 258 273-548 22-317 (351)
212 2r3i_A Cell division protein k 100.0 6.4E-39 2.2E-43 323.1 20.6 259 273-547 8-288 (299)
213 1blx_A Cyclin-dependent kinase 100.0 3.9E-39 1.3E-43 328.8 19.1 259 273-547 16-301 (326)
214 1z57_A Dual specificity protei 100.0 6.8E-39 2.3E-43 328.3 21.0 257 273-547 19-333 (339)
215 2fst_X Mitogen-activated prote 100.0 3.6E-39 1.2E-43 334.6 18.9 257 273-548 34-317 (367)
216 2xrw_A Mitogen-activated prote 100.0 6.9E-39 2.3E-43 333.3 21.0 255 273-547 30-323 (371)
217 2wtk_C Serine/threonine-protei 100.0 1.5E-38 5.2E-43 321.2 22.9 246 273-549 10-270 (305)
218 2j0j_A Focal adhesion kinase 1 100.0 3.4E-39 1.1E-43 358.6 19.4 247 272-549 394-651 (656)
219 3qyz_A Mitogen-activated prote 100.0 6.6E-39 2.2E-43 332.6 20.2 258 273-549 32-320 (364)
220 2i6l_A Mitogen-activated prote 100.0 2.8E-39 9.5E-44 328.6 16.7 257 273-548 16-311 (320)
221 2x7f_A TRAF2 and NCK-interacti 100.0 5.9E-39 2E-43 327.5 19.2 247 273-548 29-292 (326)
222 2pml_X PFPK7, Ser/Thr protein 100.0 3.6E-39 1.2E-43 332.2 17.6 256 273-547 36-327 (348)
223 1phk_A Phosphorylase kinase; g 100.0 1.6E-38 5.4E-43 320.0 21.6 247 273-547 22-288 (298)
224 3cek_A Dual specificity protei 100.0 1.2E-38 4E-43 323.6 20.4 246 273-549 33-299 (313)
225 2vwi_A Serine/threonine-protei 100.0 8.3E-40 2.8E-44 329.9 11.3 259 273-547 20-292 (303)
226 4e7w_A Glycogen synthase kinas 100.0 8.6E-39 2.9E-43 335.1 19.4 257 272-547 44-326 (394)
227 2rio_A Serine/threonine-protei 100.0 3.3E-39 1.1E-43 342.6 16.4 249 273-546 20-299 (434)
228 3pfq_A PKC-B, PKC-beta, protei 100.0 3.8E-39 1.3E-43 359.2 17.6 242 273-546 346-601 (674)
229 4exu_A Mitogen-activated prote 100.0 1.4E-38 4.7E-43 331.1 20.7 256 273-548 47-329 (371)
230 3eb0_A Putative uncharacterize 100.0 5E-39 1.7E-43 335.8 17.1 256 273-547 12-326 (383)
231 1q8y_A SR protein kinase; tran 100.0 1.7E-38 5.9E-43 330.2 21.0 263 273-548 24-339 (373)
232 1j1b_A Glycogen synthase kinas 100.0 4.9E-39 1.7E-43 339.8 16.8 258 272-547 58-341 (420)
233 2b9h_A MAP kinase FUS3, mitoge 100.0 1.1E-38 3.9E-43 329.1 18.5 257 273-548 16-311 (353)
234 2wei_A Calmodulin-domain prote 100.0 4.1E-38 1.4E-42 315.5 22.0 246 273-547 27-281 (287)
235 1zy4_A Serine/threonine-protei 100.0 1.7E-38 5.8E-43 320.0 18.5 246 273-548 11-289 (303)
236 2vx3_A Dual specificity tyrosi 100.0 4.1E-38 1.4E-42 328.8 22.0 260 273-547 59-377 (382)
237 2eu9_A Dual specificity protei 100.0 4.1E-38 1.4E-42 324.8 20.8 258 273-548 24-339 (355)
238 3coi_A Mitogen-activated prote 100.0 5.2E-38 1.8E-42 324.4 20.8 256 273-548 29-311 (353)
239 3e3p_A Protein kinase, putativ 100.0 4E-38 1.4E-42 325.9 19.6 261 273-548 28-320 (360)
240 2dyl_A Dual specificity mitoge 100.0 2E-38 6.8E-43 322.2 16.3 248 273-548 30-289 (318)
241 3aln_A Dual specificity mitoge 100.0 7E-39 2.4E-43 327.3 12.3 256 273-550 27-293 (327)
242 3p23_A Serine/threonine-protei 100.0 9.6E-38 3.3E-42 330.6 20.1 242 273-546 29-287 (432)
243 2iwi_A Serine/threonine-protei 100.0 4.7E-38 1.6E-42 318.8 13.2 238 273-548 36-289 (312)
244 3a99_A Proto-oncogene serine/t 100.0 2.5E-38 8.6E-43 322.3 11.0 238 273-548 48-299 (320)
245 3uqc_A Probable conserved tran 100.0 1.3E-36 4.4E-41 304.4 19.6 228 273-551 36-267 (286)
246 3m2w_A MAP kinase-activated pr 100.0 1.3E-36 4.4E-41 306.5 18.5 232 273-550 23-264 (299)
247 3dzo_A Rhoptry kinase domain; 100.0 1.1E-37 3.8E-42 328.7 10.2 241 273-545 83-366 (413)
248 2pzi_A Probable serine/threoni 100.0 1.3E-36 4.4E-41 340.7 17.1 233 273-547 85-326 (681)
249 3qa8_A MGC80376 protein; kinas 100.0 1.5E-37 5.2E-42 340.0 9.3 253 273-541 19-296 (676)
250 2vuw_A Serine/threonine-protei 100.0 2.4E-36 8.3E-41 309.7 11.1 239 273-545 25-334 (336)
251 4azs_A Methyltransferase WBDD; 100.0 3.7E-30 1.2E-34 280.9 5.5 182 274-472 240-437 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 5.8E-27 2E-31 254.2 8.4 178 273-474 341-539 (540)
253 1zar_A RIO2 kinase; serine kin 99.9 3.1E-23 1.1E-27 206.4 8.7 140 273-446 95-252 (282)
254 3rgz_A Protein brassinosteroid 99.8 1.1E-20 3.7E-25 214.5 11.4 121 42-163 628-751 (768)
255 1ogq_A PGIP-2, polygalacturona 99.8 7.5E-20 2.6E-24 185.0 9.9 143 7-150 32-186 (313)
256 1zth_A RIO1 serine protein kin 99.8 1.9E-19 6.5E-24 176.8 11.7 134 273-428 52-220 (258)
257 4ecn_A Leucine-rich repeat pro 99.7 1E-18 3.5E-23 198.3 7.2 138 12-151 315-561 (876)
258 4eco_A Uncharacterized protein 99.7 1.9E-18 6.6E-23 191.7 8.2 142 7-151 65-318 (636)
259 2v70_A SLIT-2, SLIT homolog 2 99.7 4E-17 1.4E-21 156.2 12.7 151 3-153 5-168 (220)
260 1ogq_A PGIP-2, polygalacturona 99.7 1.9E-17 6.7E-22 167.3 10.1 137 21-160 149-312 (313)
261 3rgz_A Protein brassinosteroid 99.7 2.2E-17 7.6E-22 187.3 10.8 141 7-150 38-212 (768)
262 3e6j_A Variable lymphocyte rec 99.7 8.5E-17 2.9E-21 154.9 12.9 145 7-153 17-174 (229)
263 2o6s_A Variable lymphocyte rec 99.7 2.2E-16 7.7E-21 149.4 14.1 146 9-155 7-165 (208)
264 1w8a_A SLIT protein; signaling 99.7 6.3E-17 2.1E-21 151.3 9.0 148 8-155 7-166 (192)
265 2v9t_B SLIT homolog 2 protein 99.7 2.9E-16 1E-20 150.1 13.2 151 2-153 4-167 (220)
266 4gyi_A RIO2 kinase; protein ki 99.6 6.5E-17 2.2E-21 165.3 5.3 137 272-429 99-267 (397)
267 4fcg_A Uncharacterized protein 99.6 2E-16 6.9E-21 160.9 7.1 141 6-151 58-219 (328)
268 1w8a_A SLIT protein; signaling 99.6 3.8E-15 1.3E-19 139.1 12.1 126 24-153 11-141 (192)
269 2o6r_A Variable lymphocyte rec 99.6 3.1E-15 1.1E-19 137.7 10.9 123 9-132 7-141 (177)
270 3rfs_A Internalin B, repeat mo 99.6 1.1E-14 3.9E-19 143.7 13.8 127 21-150 63-193 (272)
271 3m19_A Variable lymphocyte rec 99.6 1.5E-14 5E-19 141.2 12.7 130 21-151 35-168 (251)
272 3m19_A Variable lymphocyte rec 99.6 2.2E-14 7.4E-19 140.0 13.1 133 20-153 58-194 (251)
273 2je0_A Acidic leucine-rich nuc 99.5 5.3E-15 1.8E-19 132.0 6.4 110 21-132 17-130 (149)
274 4fcg_A Uncharacterized protein 99.5 7.9E-15 2.7E-19 149.1 8.3 133 20-154 149-293 (328)
275 2ell_A Acidic leucine-rich nuc 99.5 7.9E-15 2.7E-19 133.7 7.1 129 20-150 23-159 (168)
276 2z81_A CD282 antigen, TOLL-lik 99.5 2.9E-14 1E-18 155.2 10.7 141 8-150 3-160 (549)
277 2v70_A SLIT-2, SLIT homolog 2 99.5 1.9E-14 6.6E-19 137.4 7.8 112 20-132 56-170 (220)
278 2wfh_A SLIT homolog 2 protein 99.5 7.6E-14 2.6E-18 130.4 11.4 124 26-153 15-141 (193)
279 3v47_A TOLL-like receptor 5B a 99.5 4.8E-14 1.7E-18 149.8 10.9 143 8-151 7-167 (455)
280 3j0a_A TOLL-like receptor 5; m 99.5 2.6E-14 9.1E-19 163.7 9.2 133 20-154 425-563 (844)
281 3v47_A TOLL-like receptor 5B a 99.5 9.2E-14 3.2E-18 147.6 12.8 134 21-155 275-412 (455)
282 4eco_A Uncharacterized protein 99.5 1.8E-14 6E-19 159.9 7.0 130 20-151 205-366 (636)
283 3oja_A Leucine-rich immune mol 99.5 3.6E-14 1.2E-18 152.2 8.7 126 21-150 99-226 (487)
284 3cvr_A Invasion plasmid antige 99.5 4.4E-14 1.5E-18 153.3 9.3 127 6-150 40-172 (571)
285 2o6q_A Variable lymphocyte rec 99.5 2.9E-13 1E-17 133.4 14.1 126 23-149 39-168 (270)
286 1p9a_G Platelet glycoprotein I 99.5 3.6E-13 1.2E-17 134.2 14.3 127 20-150 54-184 (290)
287 2wfh_A SLIT homolog 2 protein 99.5 2.3E-13 7.8E-18 127.1 11.7 128 2-131 3-142 (193)
288 1ozn_A Reticulon 4 receptor; N 99.5 1.1E-13 3.7E-18 137.6 10.1 132 20-151 79-214 (285)
289 4g8a_A TOLL-like receptor 4; l 99.5 1.9E-13 6.4E-18 151.2 13.0 129 21-150 52-185 (635)
290 2o6q_A Variable lymphocyte rec 99.5 4.4E-13 1.5E-17 132.2 13.3 131 20-151 60-194 (270)
291 2z66_A Variable lymphocyte rec 99.5 2.7E-13 9.2E-18 136.2 11.9 132 20-151 100-236 (306)
292 3zyj_A Leucine-rich repeat-con 99.5 1.9E-13 6.6E-18 144.6 11.4 131 22-153 161-294 (440)
293 3zyi_A Leucine-rich repeat-con 99.4 2.8E-13 9.7E-18 143.9 11.7 132 22-154 172-306 (452)
294 2z66_A Variable lymphocyte rec 99.4 1.7E-13 5.9E-18 137.6 9.2 140 9-150 7-162 (306)
295 3rfs_A Internalin B, repeat mo 99.4 6.6E-13 2.3E-17 131.0 13.1 135 19-154 83-221 (272)
296 2xot_A Amphoterin-induced prot 99.4 4.3E-13 1.5E-17 138.1 12.0 140 9-150 18-175 (361)
297 4ezg_A Putative uncharacterize 99.4 2.9E-13 9.8E-18 126.8 9.6 124 22-149 45-170 (197)
298 2o6r_A Variable lymphocyte rec 99.4 1.1E-12 3.8E-17 120.5 13.0 127 23-153 9-139 (177)
299 4ecn_A Leucine-rich repeat pro 99.4 1.1E-13 3.6E-18 157.2 7.3 129 20-151 447-608 (876)
300 2z63_A TOLL-like receptor 4, v 99.4 4.5E-13 1.5E-17 146.5 12.0 130 23-152 398-532 (570)
301 2o6s_A Variable lymphocyte rec 99.4 7E-13 2.4E-17 125.2 11.3 113 20-133 51-166 (208)
302 4glp_A Monocyte differentiatio 99.4 1.4E-13 4.9E-18 138.5 6.8 129 20-151 144-285 (310)
303 3e6j_A Variable lymphocyte rec 99.4 6.4E-13 2.2E-17 127.6 11.0 112 20-133 63-177 (229)
304 3j0a_A TOLL-like receptor 5; m 99.4 4.9E-13 1.7E-17 153.2 11.9 139 9-150 14-160 (844)
305 3vq2_A TLR4, TOLL-like recepto 99.4 7.7E-13 2.6E-17 145.8 13.1 143 7-150 5-165 (606)
306 3vq2_A TLR4, TOLL-like recepto 99.4 5.1E-13 1.7E-17 147.3 11.4 129 21-149 399-532 (606)
307 2z80_A TOLL-like receptor 2, v 99.4 6.3E-13 2.1E-17 136.4 10.8 143 5-150 26-186 (353)
308 2v9t_B SLIT homolog 2 protein 99.4 9.5E-13 3.2E-17 125.6 11.1 110 20-130 55-167 (220)
309 2z62_A TOLL-like receptor 4, v 99.4 1.2E-12 4.1E-17 129.4 12.0 110 20-130 51-164 (276)
310 1ozn_A Reticulon 4 receptor; N 99.4 1.4E-12 4.6E-17 129.6 12.3 130 20-150 55-189 (285)
311 4g8a_A TOLL-like receptor 4; l 99.4 8.9E-13 3.1E-17 145.7 12.0 133 20-153 444-582 (635)
312 3oja_A Leucine-rich immune mol 99.4 4.6E-13 1.6E-17 143.5 9.1 139 10-153 110-252 (487)
313 1dce_A Protein (RAB geranylger 99.4 5.1E-13 1.8E-17 145.4 9.5 107 22-134 442-552 (567)
314 1wwl_A Monocyte differentiatio 99.4 8.5E-14 2.9E-18 140.4 2.7 131 20-150 94-240 (312)
315 2xot_A Amphoterin-induced prot 99.4 6.4E-13 2.2E-17 136.8 9.0 131 20-153 63-204 (361)
316 1p9a_G Platelet glycoprotein I 99.4 2.7E-12 9.1E-17 127.9 13.2 128 21-151 31-161 (290)
317 2z62_A TOLL-like receptor 4, v 99.4 1.8E-12 6.2E-17 128.1 11.9 129 21-150 28-161 (276)
318 2id5_A Lingo-1, leucine rich r 99.4 2E-12 6.8E-17 138.2 12.9 140 10-150 12-164 (477)
319 3g39_A Variable lymphocyte rec 99.4 1.9E-12 6.6E-17 118.2 10.8 105 25-133 13-120 (170)
320 4b8c_D Glucose-repressible alc 99.4 6.6E-13 2.2E-17 149.0 9.3 108 39-149 217-327 (727)
321 2z7x_B TOLL-like receptor 1, v 99.4 1.4E-12 4.9E-17 140.9 11.5 131 19-151 322-457 (520)
322 1wwl_A Monocyte differentiatio 99.4 7.5E-13 2.6E-17 133.4 8.6 127 21-149 121-264 (312)
323 3t6q_A CD180 antigen; protein- 99.4 2.2E-12 7.4E-17 142.2 12.8 139 11-150 14-165 (606)
324 4ezg_A Putative uncharacterize 99.4 6.4E-13 2.2E-17 124.4 7.1 127 20-150 65-193 (197)
325 2r9u_A Variable lymphocyte rec 99.4 2.9E-12 1E-16 117.4 11.3 105 24-132 15-122 (174)
326 3zyi_A Leucine-rich repeat-con 99.4 3.1E-12 1.1E-16 135.8 12.9 140 10-150 55-208 (452)
327 1a9n_A U2A', U2A'; complex (nu 99.3 1.8E-12 6E-17 119.1 9.1 123 20-148 18-150 (176)
328 3a79_B TLR6, VLRB.59, TOLL-lik 99.3 3.7E-12 1.3E-16 139.1 13.3 131 19-151 351-486 (562)
329 3t6q_A CD180 antigen; protein- 99.3 1.1E-12 3.9E-17 144.5 9.0 130 20-150 399-535 (606)
330 2z7x_B TOLL-like receptor 1, v 99.3 1.9E-12 6.4E-17 140.0 10.3 129 20-153 347-483 (520)
331 3a79_B TLR6, VLRB.59, TOLL-lik 99.3 2.6E-12 8.8E-17 140.4 11.5 129 20-153 376-512 (562)
332 2ifg_A High affinity nerve gro 99.3 3.4E-12 1.2E-16 130.5 11.6 108 8-130 7-118 (347)
333 3oja_B Anopheles plasmodium-re 99.3 2.9E-12 1E-16 141.0 11.1 129 21-150 51-183 (597)
334 4glp_A Monocyte differentiatio 99.3 1.6E-12 5.4E-17 130.9 8.2 131 20-151 116-264 (310)
335 2xwt_C Thyrotropin receptor; s 99.3 3E-12 1E-16 123.7 9.8 128 21-150 31-168 (239)
336 1xeu_A Internalin C; cellular 99.3 2.7E-12 9.2E-17 126.0 9.2 119 22-149 64-183 (263)
337 1ziw_A TOLL-like receptor 3; i 99.3 4.1E-12 1.4E-16 142.0 11.4 141 9-150 4-157 (680)
338 1h6t_A Internalin B; cell adhe 99.3 2.6E-12 9E-17 128.0 8.7 123 20-150 67-190 (291)
339 4b8c_D Glucose-repressible alc 99.3 1.3E-12 4.5E-17 146.6 6.9 127 20-151 223-354 (727)
340 1m9s_A Internalin B; cell inva 99.3 3.7E-12 1.2E-16 139.6 9.8 123 20-150 64-187 (605)
341 1h6t_A Internalin B; cell adhe 99.3 5E-12 1.7E-16 126.0 9.9 122 21-150 46-168 (291)
342 3cvr_A Invasion plasmid antige 99.3 7.6E-12 2.6E-16 135.7 12.0 114 21-151 80-193 (571)
343 2ft3_A Biglycan; proteoglycan, 99.3 1.1E-11 3.8E-16 125.9 12.5 137 9-149 33-183 (332)
344 1ziw_A TOLL-like receptor 3; i 99.3 5.5E-12 1.9E-16 141.0 10.8 134 20-155 479-626 (680)
345 2z81_A CD282 antigen, TOLL-lik 99.3 2.4E-12 8.3E-17 140.0 7.8 129 19-148 48-182 (549)
346 3g39_A Variable lymphocyte rec 99.3 1E-11 3.5E-16 113.3 10.4 105 48-154 11-118 (170)
347 1xku_A Decorin; proteoglycan, 99.3 1.4E-11 4.6E-16 125.1 11.5 144 3-150 25-183 (330)
348 3oja_B Anopheles plasmodium-re 99.3 1.2E-11 4.3E-16 135.9 11.9 126 21-149 75-203 (597)
349 3o53_A Protein LRIM1, AGAP0063 99.3 6.6E-12 2.3E-16 126.7 8.8 127 21-151 99-227 (317)
350 3zyj_A Leucine-rich repeat-con 99.3 1.7E-11 5.9E-16 129.6 12.4 140 10-150 44-197 (440)
351 2r9u_A Variable lymphocyte rec 99.3 1.7E-11 5.7E-16 112.3 10.6 104 49-154 15-121 (174)
352 1m9s_A Internalin B; cell inva 99.3 1.1E-11 3.7E-16 135.9 10.6 122 21-149 87-208 (605)
353 1h6u_A Internalin H; cell adhe 99.3 6.9E-12 2.4E-16 126.1 8.3 126 19-151 83-208 (308)
354 3o6n_A APL1; leucine-rich repe 99.3 9.9E-12 3.4E-16 129.2 9.5 128 21-150 45-177 (390)
355 1ds9_A Outer arm dynein; leuci 99.3 3.4E-14 1.2E-18 133.3 -8.4 129 20-151 17-153 (198)
356 3tm0_A Aminoglycoside 3'-phosp 99.2 2E-11 6.8E-16 119.6 10.7 140 274-425 20-212 (263)
357 1xeu_A Internalin C; cellular 99.2 1.5E-11 5.3E-16 120.5 9.6 122 21-151 41-163 (263)
358 1h6u_A Internalin H; cell adhe 99.2 1.6E-11 5.5E-16 123.4 9.9 122 21-149 63-184 (308)
359 2id5_A Lingo-1, leucine rich r 99.2 1.4E-11 4.9E-16 131.5 10.1 130 20-150 55-188 (477)
360 3o53_A Protein LRIM1, AGAP0063 99.2 1.6E-11 5.4E-16 123.9 9.3 100 46-148 99-201 (317)
361 2xwt_C Thyrotropin receptor; s 99.2 1.3E-11 4.3E-16 119.2 8.0 126 20-149 54-190 (239)
362 1dce_A Protein (RAB geranylger 99.2 1.4E-11 4.9E-16 134.0 9.0 100 20-122 462-567 (567)
363 2z63_A TOLL-like receptor 4, v 99.2 2.2E-11 7.5E-16 133.0 10.5 129 21-151 373-507 (570)
364 1jl5_A Outer protein YOPM; leu 99.2 4.2E-11 1.4E-15 127.0 11.7 78 46-129 131-209 (454)
365 2z80_A TOLL-like receptor 2, v 99.2 1.5E-11 5.2E-16 126.0 7.9 128 20-149 75-209 (353)
366 2ell_A Acidic leucine-rich nuc 99.2 1.8E-11 6.2E-16 111.2 7.4 105 44-150 22-132 (168)
367 1xku_A Decorin; proteoglycan, 99.2 7.2E-11 2.4E-15 119.7 12.6 127 22-150 122-275 (330)
368 3o6n_A APL1; leucine-rich repe 99.2 5.7E-11 1.9E-15 123.4 11.9 125 21-149 69-197 (390)
369 4fmz_A Internalin; leucine ric 99.2 2.7E-11 9.2E-16 123.7 8.7 123 21-150 199-323 (347)
370 1o6v_A Internalin A; bacterial 99.2 2.8E-11 9.6E-16 128.9 9.1 124 20-150 242-365 (466)
371 2je0_A Acidic leucine-rich nuc 99.2 1.9E-11 6.5E-16 108.7 6.3 105 44-150 15-125 (149)
372 3bz5_A Internalin-J, INLJ; leu 99.2 2.7E-11 9.1E-16 128.6 8.4 121 20-151 169-299 (457)
373 1o6v_A Internalin A; bacterial 99.2 3.7E-11 1.3E-15 128.0 9.5 125 20-151 220-344 (466)
374 3bz5_A Internalin-J, INLJ; leu 99.2 1.2E-10 3.9E-15 123.7 12.9 101 20-129 105-205 (457)
375 1a9n_A U2A', U2A'; complex (nu 99.2 2.7E-11 9.2E-16 111.1 6.4 104 21-129 42-154 (176)
376 2ft3_A Biglycan; proteoglycan, 99.2 1.1E-10 3.6E-15 118.6 11.3 124 22-150 34-159 (332)
377 2ifg_A High affinity nerve gro 99.1 7.9E-11 2.7E-15 120.3 9.7 104 49-153 11-118 (347)
378 1jl5_A Outer protein YOPM; leu 99.1 1.3E-10 4.4E-15 123.2 11.2 117 21-150 91-207 (454)
379 4ay9_X Follicle-stimulating ho 99.1 1.3E-10 4.4E-15 118.9 8.9 140 9-149 9-165 (350)
380 1nd4_A Aminoglycoside 3'-phosp 99.1 2.3E-10 7.8E-15 111.6 10.1 132 277-425 29-213 (264)
381 2ca6_A RAN GTPase-activating p 99.1 1.2E-11 4.3E-16 128.3 0.7 129 21-149 159-314 (386)
382 4fmz_A Internalin; leucine ric 99.1 1.7E-10 5.7E-15 117.7 7.6 124 20-150 220-345 (347)
383 2ast_B S-phase kinase-associat 99.0 3.1E-11 1.1E-15 122.6 1.5 133 10-148 38-178 (336)
384 3g06_A SSPH2 (leucine-rich rep 99.0 3E-10 1E-14 124.7 9.1 126 7-150 20-153 (622)
385 1ds9_A Outer arm dynein; leuci 99.0 1.8E-12 6.3E-17 121.4 -7.6 108 20-133 47-158 (198)
386 3g06_A SSPH2 (leucine-rich rep 99.0 6.3E-10 2.1E-14 122.1 10.8 52 93-149 221-272 (622)
387 2ast_B S-phase kinase-associat 99.0 2.4E-11 8.3E-16 123.4 -0.9 140 8-149 46-206 (336)
388 3dxp_A Putative acyl-COA dehyd 99.0 8.9E-10 3.1E-14 113.1 8.6 145 274-427 44-249 (359)
389 3sg8_A APH(2'')-ID; antibiotic 98.9 6E-10 2.1E-14 111.5 5.0 184 274-473 26-287 (304)
390 3rw6_A Nuclear RNA export fact 98.9 5.9E-11 2E-15 115.5 -2.9 125 8-133 77-238 (267)
391 2ca6_A RAN GTPase-activating p 98.9 1.9E-10 6.4E-15 119.3 0.2 130 20-149 31-198 (386)
392 3goz_A Leucine-rich repeat-con 98.8 8.7E-10 3E-14 113.3 3.1 107 23-129 24-152 (362)
393 3goz_A Leucine-rich repeat-con 98.8 9.4E-10 3.2E-14 113.0 0.9 125 25-150 2-150 (362)
394 4ay9_X Follicle-stimulating ho 98.7 4.3E-08 1.5E-12 100.1 9.2 109 20-128 53-167 (350)
395 3r70_A Aminoglycoside phosphot 98.6 2E-07 6.8E-12 93.8 12.4 137 273-427 42-238 (320)
396 1z7x_W Ribonuclease inhibitor; 98.6 3.5E-09 1.2E-13 112.2 -1.1 129 21-149 227-381 (461)
397 1z7x_W Ribonuclease inhibitor; 98.5 4.4E-09 1.5E-13 111.4 -2.7 129 20-149 198-352 (461)
398 3un9_A NLR family member X1; l 98.5 5.6E-09 1.9E-13 107.5 -2.6 130 21-150 101-251 (372)
399 3d1u_A Putative fructosamine-3 98.5 1.1E-06 3.9E-11 86.8 12.9 74 274-351 21-97 (288)
400 4gkh_A Aminoglycoside 3'-phosp 98.4 1.6E-06 5.6E-11 84.7 12.9 138 275-425 31-222 (272)
401 3tdw_A Gentamicin resistance p 98.4 1.2E-06 3.9E-11 87.6 11.8 139 274-426 25-224 (306)
402 3rw6_A Nuclear RNA export fact 98.4 2E-07 7E-12 90.5 5.3 77 43-121 167-257 (267)
403 3un9_A NLR family member X1; l 98.3 9.4E-08 3.2E-12 98.3 1.4 110 21-130 126-254 (372)
404 3ogk_B Coronatine-insensitive 98.2 6.7E-08 2.3E-12 105.7 -3.9 129 21-149 378-524 (592)
405 3ovc_A Hygromycin-B 4-O-kinase 98.2 7.7E-06 2.6E-10 83.6 11.5 73 274-352 47-122 (362)
406 1io0_A Tropomodulin; LRR prote 98.1 5.7E-07 2E-11 82.7 1.0 107 21-128 36-164 (185)
407 3ats_A Putative uncharacterize 98.0 4E-06 1.4E-10 85.5 6.1 79 274-352 26-121 (357)
408 3ogk_B Coronatine-insensitive 97.9 4.2E-06 1.4E-10 91.4 3.9 101 22-124 139-252 (592)
409 2p1m_B Transport inhibitor res 97.9 5.2E-07 1.8E-11 98.7 -4.3 126 22-148 373-516 (594)
410 3f7w_A Putative fructosamine-3 97.9 8.2E-05 2.8E-09 73.3 11.6 74 274-351 21-97 (288)
411 2olc_A MTR kinase, methylthior 97.8 2.2E-05 7.5E-10 81.3 7.6 74 274-349 36-120 (397)
412 2q83_A YTAA protein; 2635576, 97.8 0.00025 8.7E-09 71.3 14.7 143 274-425 38-251 (346)
413 3jr1_A Putative fructosamine-3 97.7 0.0002 6.8E-09 71.3 12.0 74 274-351 42-118 (312)
414 2p1m_B Transport inhibitor res 97.7 3.9E-06 1.3E-10 91.7 -0.7 83 44-126 103-195 (594)
415 2ra8_A Uncharacterized protein 97.6 1.2E-05 4E-10 82.1 1.6 124 20-148 171-317 (362)
416 1io0_A Tropomodulin; LRR prote 97.6 1.8E-05 6.2E-10 72.6 2.1 89 41-129 31-137 (185)
417 2pyw_A Uncharacterized protein 97.6 0.0002 6.7E-09 74.7 10.3 73 397-470 233-313 (420)
418 3sb4_A Hypothetical leucine ri 97.5 0.00017 5.7E-09 72.5 7.9 81 45-128 225-310 (329)
419 3sb4_A Hypothetical leucine ri 97.4 0.00033 1.1E-08 70.3 8.7 37 21-59 101-137 (329)
420 2ra8_A Uncharacterized protein 97.2 0.00028 9.6E-09 71.8 5.2 126 21-149 139-290 (362)
421 3dxq_A Choline/ethanolamine ki 97.1 0.0017 5.8E-08 64.1 10.1 70 274-351 24-95 (301)
422 1zyl_A Hypothetical protein YI 97.1 0.0053 1.8E-07 61.2 13.9 148 275-426 33-223 (328)
423 1nw1_A Choline kinase (49.2 KD 97.1 0.0017 5.7E-08 67.7 9.8 72 274-351 79-159 (429)
424 3csv_A Aminoglycoside phosphot 97.0 0.005 1.7E-07 61.6 12.3 31 396-426 183-217 (333)
425 2ppq_A HSK, HK, homoserine kin 97.0 0.015 5.2E-07 57.6 15.6 149 274-425 28-216 (322)
426 2qg7_A Ethanolamine kinase PV0 96.8 0.0046 1.6E-07 64.9 10.7 73 274-351 114-188 (458)
427 3feg_A Choline/ethanolamine ki 96.7 0.0061 2.1E-07 62.2 10.5 144 274-425 56-253 (379)
428 3c5i_A Choline kinase; choline 96.5 0.0035 1.2E-07 63.8 6.6 73 274-351 39-121 (369)
429 3rfe_A Platelet glycoprotein I 96.5 0.0044 1.5E-07 52.9 6.1 35 71-105 33-67 (130)
430 3i1a_A Spectinomycin phosphotr 96.3 0.018 6.1E-07 57.8 10.5 31 396-426 206-236 (339)
431 2yle_A Protein spire homolog 1 96.2 0.044 1.5E-06 50.6 11.5 102 350-472 34-135 (229)
432 1pgv_A TMD-1, tropomodulin TMD 95.9 0.0024 8.1E-08 58.5 1.6 84 42-125 37-136 (197)
433 3e4g_A ATP synthase subunit S, 95.8 0.0031 1.1E-07 56.6 2.0 81 46-126 61-150 (176)
434 3e4g_A ATP synthase subunit S, 95.6 0.0049 1.7E-07 55.3 2.5 85 21-106 61-153 (176)
435 3rfe_A Platelet glycoprotein I 95.5 0.017 5.9E-07 49.1 5.5 52 73-127 12-67 (130)
436 4fdw_A Leucine rich hypothetic 95.4 0.034 1.2E-06 57.2 8.4 120 20-148 225-355 (401)
437 3f2s_A CK, chetk-alpha, cholin 95.3 0.069 2.4E-06 54.7 10.2 30 396-425 244-279 (401)
438 4fdw_A Leucine rich hypothetic 94.9 0.2 6.7E-06 51.4 12.4 66 37-103 171-236 (401)
439 1pgv_A TMD-1, tropomodulin TMD 94.8 0.0098 3.4E-07 54.4 2.0 38 45-82 69-111 (197)
440 3mes_A Choline kinase; malaria 94.7 0.039 1.3E-06 57.0 6.5 73 274-351 76-157 (424)
441 3g15_A CK, chetk-alpha, cholin 91.6 0.65 2.2E-05 47.5 9.7 29 397-425 245-279 (401)
442 4ann_A ESSB; membrane protein, 90.6 0.9 3.1E-05 41.7 8.6 117 321-474 42-158 (215)
443 4gt6_A Cell surface protein; l 89.6 1.3 4.4E-05 45.0 9.9 79 41-123 260-342 (394)
444 4h09_A Hypothetical leucine ri 88.6 0.93 3.2E-05 45.6 7.9 96 22-124 218-319 (379)
445 4ano_A ESSB; membrane protein, 86.2 1.9 6.6E-05 39.7 7.6 114 322-474 48-163 (219)
446 4fs7_A Uncharacterized protein 85.0 2.1 7E-05 43.4 8.2 74 22-101 254-328 (394)
447 4gt6_A Cell surface protein; l 80.6 6.3 0.00022 39.7 9.8 79 41-125 283-367 (394)
448 4fs7_A Uncharacterized protein 80.0 2.6 9E-05 42.6 6.6 83 37-125 288-376 (394)
449 3cxl_A N-chimerin; SH2, RHO-GA 80.0 0.3 1E-05 51.0 -0.5 59 274-335 148-215 (463)
450 4h09_A Hypothetical leucine ri 78.6 4.7 0.00016 40.3 8.0 84 42-128 213-299 (379)
451 2l2t_A Receptor tyrosine-prote 77.7 2.9 0.0001 27.5 3.9 8 179-186 11-18 (44)
452 2ks1_B Epidermal growth factor 74.0 3 0.0001 27.5 3.2 6 180-185 13-18 (44)
453 2k1k_A Ephrin type-A receptor 61.9 9.1 0.00031 24.3 3.5 13 180-192 13-25 (38)
454 2jwa_A Receptor tyrosine-prote 61.7 6.6 0.00023 25.8 2.8 6 181-186 15-20 (44)
455 2klu_A T-cell surface glycopro 29.7 46 0.0016 23.8 3.1 15 185-199 15-29 (70)
456 1cja_A Protein (actin-fragmin 22.4 3.8E+02 0.013 26.1 9.3 133 279-427 79-238 (342)
457 3ls8_A Phosphatidylinositol 3- 22.3 7.2E+02 0.024 26.3 13.1 86 327-424 402-500 (614)
No 1
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=3.6e-55 Score=445.39 Aligned_cols=254 Identities=21% Similarity=0.343 Sum_probs=204.6
Q ss_pred ccccccccCceEEEEEEEc------CCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEe
Q 047954 272 PAEGLGKGIFGNSYKALLE------GRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKF 345 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 345 (582)
..+.||+|+||+||+|++. ++..||||+++.......++|.+|+++|++++|||||+++|+|.+.+..+|||||
T Consensus 45 l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey 124 (329)
T 4aoj_A 45 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEY 124 (329)
T ss_dssp EEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred EEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 3578999999999999875 4678999999877666778899999999999999999999999999999999999
Q ss_pred CCCCChHHHHhcCCCC---------CCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCce
Q 047954 346 AGNGNLFNRIHGGKSS---------KNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMV 416 (582)
Q Consensus 346 ~~~gsL~~~l~~~~~~---------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~ 416 (582)
|++|+|.++++..... ....+++|.+++.|+.|||+||+|||+++ ||||||||+||||++++.+
T Consensus 125 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-------iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 125 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH-------FVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp CTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCCGGGEEEETTTEE
T ss_pred CCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC-------eecccccHhhEEECCCCcE
Confidence 9999999999865321 11236999999999999999999999988 9999999999999999999
Q ss_pred EEeeccccccccCc------ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHH
Q 047954 417 LVSDYGFSSLVAQP------IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWV 489 (582)
Q Consensus 417 kl~DfG~a~~~~~~------~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~ 489 (582)
||+|||+|+.+... ....+|+.|||||++.+..|+.++|||||||+||||+| |+.||... ...++...+
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~----~~~~~~~~i 273 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL----SNTEAIDCI 273 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSS----CHHHHHHHH
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCC----CHHHHHHHH
Confidence 99999999876432 22347889999999999999999999999999999999 89999643 223333333
Q ss_pred HHHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccC
Q 047954 490 LRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVT 550 (582)
Q Consensus 490 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 550 (582)
.. +...+.. .....++.+|+.+||+.||++||||+||+++|+.+.+.
T Consensus 274 ~~----g~~~~~p----------~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 274 TQ----GRELERP----------RACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp HH----TCCCCCC----------TTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred Hc----CCCCCCc----------ccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 22 2111111 11123678899999999999999999999999988653
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.4e-55 Score=442.39 Aligned_cols=253 Identities=20% Similarity=0.361 Sum_probs=207.0
Q ss_pred ccccccccCceEEEEEEEc------CCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEe
Q 047954 272 PAEGLGKGIFGNSYKALLE------GRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKF 345 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 345 (582)
..+.||+|+||+||+|++. ++..||||+++.......++|.+|+++|++++|||||+++|+|.+++..++||||
T Consensus 17 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey 96 (299)
T 4asz_A 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEY 96 (299)
T ss_dssp EEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred EeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEc
Confidence 3578999999999999864 4678999999877666778899999999999999999999999999999999999
Q ss_pred CCCCChHHHHhcCCC-------CCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEE
Q 047954 346 AGNGNLFNRIHGGKS-------SKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLV 418 (582)
Q Consensus 346 ~~~gsL~~~l~~~~~-------~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl 418 (582)
|++|+|.++++.... ......++|.+++.|+.|||+||+|||+++ ||||||||+|||+++++.+||
T Consensus 97 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-------iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 97 MKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH-------FVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp CTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCSGGGEEECGGGCEEE
T ss_pred CCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-------cccCccCHhhEEECCCCcEEE
Confidence 999999999976431 112346999999999999999999999998 999999999999999999999
Q ss_pred eeccccccccCcc------cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHHHH
Q 047954 419 SDYGFSSLVAQPI------AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLR 491 (582)
Q Consensus 419 ~DfG~a~~~~~~~------~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~ 491 (582)
+|||+|+...... ...+|+.|||||++.+..|+.++|||||||++|||+| |+.||... ...++...+..
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~----~~~~~~~~i~~ 245 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL----SNNEVIECITQ 245 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS----CHHHHHHHHHH
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCC----CHHHHHHHHHc
Confidence 9999998764332 2246789999999999999999999999999999999 89999643 22333333322
Q ss_pred HHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhccc
Q 047954 492 AVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKV 549 (582)
Q Consensus 492 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 549 (582)
+...... .....++.+|+.+||+.||++||||+||++.|+.+..
T Consensus 246 ----~~~~~~p----------~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 246 ----GRVLQRP----------RTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp ----TCCCCCC----------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----CCCCCCC----------ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 2111111 1122367889999999999999999999999988764
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=6.1e-55 Score=439.56 Aligned_cols=251 Identities=25% Similarity=0.386 Sum_probs=205.1
Q ss_pred cccccccCceEEEEEEEc------CCceEEEEEecCCC-cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEe
Q 047954 273 AEGLGKGIFGNSYKALLE------GRAPVVVKRLRDLK-PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKF 345 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 345 (582)
.+.||+|+||+||+|.+. +++.||||+++... ....++|.+|+.++++++|||||+++|+|.+.+..++||||
T Consensus 31 ~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey 110 (308)
T 4gt4_A 31 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSY 110 (308)
T ss_dssp EEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEc
Confidence 467999999999999873 45789999997543 34567899999999999999999999999999999999999
Q ss_pred CCCCChHHHHhcCCCC----------CCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCc
Q 047954 346 AGNGNLFNRIHGGKSS----------KNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM 415 (582)
Q Consensus 346 ~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~ 415 (582)
|++|+|.++|+..... .....++|.+++.|+.|||+||+|||+++ ||||||||+||||++++.
T Consensus 111 ~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-------iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 111 CSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-------VVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp CSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCSGGGEEECGGGC
T ss_pred CCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-------CCCCCccccceEECCCCC
Confidence 9999999999754321 11235899999999999999999999998 999999999999999999
Q ss_pred eEEeeccccccccCc------ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHH
Q 047954 416 VLVSDYGFSSLVAQP------IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSW 488 (582)
Q Consensus 416 ~kl~DfG~a~~~~~~------~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~ 488 (582)
+||+|||+|+.+... ....+|+.|||||++.+..|+.++|||||||+||||+| |+.||... ...++...
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~----~~~~~~~~ 259 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY----SNQDVVEM 259 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTC----CHHHHHHH
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCC----CHHHHHHH
Confidence 999999999876432 22347789999999999999999999999999999999 89999643 22333333
Q ss_pred HHHHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 489 VLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 489 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
+ ..+...... ..+..++.+|+.+||+.||++||||.||+++|+...
T Consensus 260 i----~~~~~~~~p----------~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 260 I----RNRQVLPCP----------DDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp H----HTTCCCCCC----------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred H----HcCCCCCCc----------ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 2 222221111 122336889999999999999999999999998753
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=5.6e-54 Score=430.83 Aligned_cols=250 Identities=25% Similarity=0.465 Sum_probs=197.6
Q ss_pred ccccccccCceEEEEEEEcCCceEEEEEecCCC--cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCC
Q 047954 272 PAEGLGKGIFGNSYKALLEGRAPVVVKRLRDLK--PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNG 349 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 349 (582)
..+.||+|+||+||+|++.+ .||||+++... ....+.|.+|+.+|++++|||||+++|+|. .+..+||||||++|
T Consensus 40 l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~~iVmEy~~gG 116 (307)
T 3omv_A 40 LSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGS 116 (307)
T ss_dssp EEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSC
T ss_pred EeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCeEEEEEEcCCCC
Confidence 35789999999999998754 59999986433 344578999999999999999999999885 45689999999999
Q ss_pred ChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccC
Q 047954 350 NLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ 429 (582)
Q Consensus 350 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~ 429 (582)
+|.++++... ..++|.+++.|+.|||.||+|||+++ ||||||||+||||++++.+||+|||+|+....
T Consensus 117 sL~~~l~~~~-----~~l~~~~~~~i~~qia~gL~yLH~~~-------IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~ 184 (307)
T 3omv_A 117 SLYKHLHVQE-----TKFQMFQLIDIARQTAQGMDYLHAKN-------IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp BHHHHHHTSC-----CCCCHHHHHHHHHHHHHHHHHHHHTT-------CBCSCCCSSSEEEETTEEEEECCCSSCBC---
T ss_pred CHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCC-------ccCCccCHHHEEECCCCcEEEeeccCceeccc
Confidence 9999997543 25899999999999999999999988 99999999999999999999999999987643
Q ss_pred c------ccccccccccCCCCCCC---CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhccccc
Q 047954 430 P------IAAQRMISYKSPEYQSS---KKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAE 500 (582)
Q Consensus 430 ~------~~~~~~~~y~aPE~~~~---~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (582)
. ....||+.|||||++.+ ..|+.++|||||||+||||+||+.||.... .. ..+...+.......
T Consensus 185 ~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~----~~---~~~~~~~~~~~~~p 257 (307)
T 3omv_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN----NR---DQIIFMVGRGYASP 257 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC----CH---HHHHHHHHTTCCCC
T ss_pred CCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCC----hH---HHHHHHHhcCCCCC
Confidence 2 23358899999999853 468999999999999999999999996432 11 12222222221111
Q ss_pred ccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhccc
Q 047954 501 IFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKV 549 (582)
Q Consensus 501 ~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 549 (582)
... ........++.+|+.+||+.||++||||.||+++|+.++.
T Consensus 258 ~~~------~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~ 300 (307)
T 3omv_A 258 DLS------KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp CST------TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred Ccc------cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 000 0111223367889999999999999999999999998864
No 5
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=4.9e-53 Score=430.00 Aligned_cols=247 Identities=26% Similarity=0.438 Sum_probs=198.7
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCC--CcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDL--KPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNG 349 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 349 (582)
.+.||+|+||+||+|+.. +++.||||++... .....+.+.+|+.+|++++|||||++++++.+++..|||||||++|
T Consensus 29 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg 108 (350)
T 4b9d_A 29 LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGG 108 (350)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTC
T ss_pred eEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCC
Confidence 467999999999999964 6889999999654 3334578999999999999999999999999999999999999999
Q ss_pred ChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccC
Q 047954 350 NLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ 429 (582)
Q Consensus 350 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~ 429 (582)
+|.+++...+. ..+++.+++.|+.||+.||+|||+++ ||||||||+||||+.++.+||+|||+|+.+..
T Consensus 109 ~L~~~i~~~~~----~~~~e~~~~~~~~qi~~aL~ylH~~~-------IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 177 (350)
T 4b9d_A 109 DLFKRINAQKG----VLFQEDQILDWFVQICLALKHVHDRK-------ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177 (350)
T ss_dssp BHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHHTT-------CEETTCCGGGEEECTTCCEEECSTTEESCCCH
T ss_pred cHHHHHHHcCC----CCCCHHHHHHHHHHHHHHHHHHHHCC-------eeeccCCHHHEEECCCCCEEEcccccceeecC
Confidence 99999975432 25788899999999999999999998 99999999999999999999999999998765
Q ss_pred cc----cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccchh
Q 047954 430 PI----AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSE 505 (582)
Q Consensus 430 ~~----~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 505 (582)
.. ...||+.|||||++.+..|+.++|||||||++|||+||+.||... + ..+.+......... .. ..
T Consensus 178 ~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~----~---~~~~~~~i~~~~~~-~~-~~- 247 (350)
T 4b9d_A 178 TVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG----S---MKNLVLKIISGSFP-PV-SL- 247 (350)
T ss_dssp HHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS----S---HHHHHHHHHHTCCC-CC-CT-
T ss_pred CcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc----C---HHHHHHHHHcCCCC-CC-Cc-
Confidence 32 235899999999999999999999999999999999999999642 2 22222222222221 11 11
Q ss_pred hhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 506 ISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 506 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
....++.+|+.+||+.||++|||++|+++|.|..+
T Consensus 248 --------~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~ 282 (350)
T 4b9d_A 248 --------HYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAK 282 (350)
T ss_dssp --------TSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHT
T ss_pred --------cCCHHHHHHHHHHccCChhHCcCHHHHhcCHHhhc
Confidence 11225778999999999999999999999876543
No 6
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2.8e-52 Score=415.49 Aligned_cols=246 Identities=21% Similarity=0.347 Sum_probs=196.4
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCC--CcchHHHHHHHHHHHhcCCCCCccccceEEEe----CCeeEEEEEe
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDL--KPLITEEFRKQLLVIADQKHPNLLPLLAYYFS----NDEKLLVYKF 345 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~----~~~~~lv~e~ 345 (582)
.+.||+|+||+||+|... ++..||+|++... .....+.|.+|+++|++++|||||+++++|.+ ....+|||||
T Consensus 31 ~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy 110 (290)
T 3fpq_A 31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTEL 110 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred eeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeC
Confidence 356999999999999965 5778999998643 33445779999999999999999999999875 3457999999
Q ss_pred CCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeec-CCCceEEeecccc
Q 047954 346 AGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLD-DNEMVLVSDYGFS 424 (582)
Q Consensus 346 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~-~~~~~kl~DfG~a 424 (582)
|++|+|.+++.... .+++..+..|+.||+.||+|||++++ +||||||||+||||+ .++.+||+|||+|
T Consensus 111 ~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~ylH~~~~-----~IiHRDlKp~NILl~~~~g~vKl~DFGla 179 (290)
T 3fpq_A 111 MTSGTLKTYLKRFK------VMKIKVLRSWCRQILKGLQFLHTRTP-----PIIHRDLKCDNIFITGPTGSVKIGDLGLA 179 (290)
T ss_dssp CCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHTSSS-----CCCCCCCCGGGEEESSTTSCEEECCTTGG
T ss_pred CCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCC-----CEEecccChhheeEECCCCCEEEEeCcCC
Confidence 99999999997532 58899999999999999999999863 499999999999998 4789999999999
Q ss_pred ccccCc--ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhccccccc
Q 047954 425 SLVAQP--IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIF 502 (582)
Q Consensus 425 ~~~~~~--~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (582)
+..... ....||+.|||||++.+ .|+.++|||||||++|||+||+.||.... ... .+...+.....+..+
T Consensus 180 ~~~~~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~---~~~----~~~~~i~~~~~~~~~ 251 (290)
T 3fpq_A 180 TLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ---NAA----QIYRRVTSGVKPASF 251 (290)
T ss_dssp GGCCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS---SHH----HHHHHHTTTCCCGGG
T ss_pred EeCCCCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCC---cHH----HHHHHHHcCCCCCCC
Confidence 865443 23458999999998865 69999999999999999999999996421 111 122222222111111
Q ss_pred chhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhh
Q 047954 503 DSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEI 546 (582)
Q Consensus 503 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 546 (582)
+.. ...++.+|+.+||+.||++|||++|+++|.|.
T Consensus 252 ~~~---------~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~ 286 (290)
T 3fpq_A 252 DKV---------AIPEVKEIIEGCIRQNKDERYSIKDLLNHAFF 286 (290)
T ss_dssp GGC---------CCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred Ccc---------CCHHHHHHHHHHccCChhHCcCHHHHhcCccc
Confidence 111 11257789999999999999999999998774
No 7
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.1e-52 Score=426.66 Aligned_cols=245 Identities=22% Similarity=0.320 Sum_probs=204.1
Q ss_pred ccccccCceEEEEEEEc-CCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCChH
Q 047954 274 EGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLF 352 (582)
Q Consensus 274 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 352 (582)
+.||+|+||+||+|+.. +++.||||++........+.+.+|+.+|++++|||||+++++|.+++..|||||||++|+|.
T Consensus 80 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~ 159 (346)
T 4fih_A 80 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 159 (346)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEHH
T ss_pred EEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHH
Confidence 56999999999999975 68899999997555555667899999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccCc--
Q 047954 353 NRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP-- 430 (582)
Q Consensus 353 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~~-- 430 (582)
+++... .+++..+..|+.||+.||+|||+++ ||||||||+||||+.++.+||+|||+|+.+...
T Consensus 160 ~~l~~~-------~l~e~~~~~~~~qi~~aL~ylH~~~-------IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 225 (346)
T 4fih_A 160 DIVTHT-------RMNEEQIAAVCLAVLQALSVLHAQG-------VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 225 (346)
T ss_dssp HHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC
T ss_pred HHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHCC-------cccccCCHHHEEECCCCCEEEecCcCceecCCCCC
Confidence 999743 3889999999999999999999998 999999999999999999999999999877543
Q ss_pred --ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccchhhhh
Q 047954 431 --IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISV 508 (582)
Q Consensus 431 --~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 508 (582)
....||+.|||||++.+..|+.++|||||||++|||++|+.||... ...++...+ ...........
T Consensus 226 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~----~~~~~~~~i----~~~~~~~~~~~---- 293 (346)
T 4fih_A 226 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE----PPLKAMKMI----RDNLPPRLKNL---- 293 (346)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS----CHHHHHHHH----HHSSCCCCSCG----
T ss_pred cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc----CHHHHHHHH----HcCCCCCCCcc----
Confidence 2345899999999999999999999999999999999999999642 222222222 22211111110
Q ss_pred hhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 509 QRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 509 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
.....++.+|+.+||+.||++|||++|+++|.|..+
T Consensus 294 ----~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~ 329 (346)
T 4fih_A 294 ----HKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 329 (346)
T ss_dssp ----GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGG
T ss_pred ----ccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcC
Confidence 011225778999999999999999999999988654
No 8
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=7.5e-53 Score=424.97 Aligned_cols=266 Identities=18% Similarity=0.241 Sum_probs=198.1
Q ss_pred cccccccCceEEEEEEEcCCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCC----eeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSND----EKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~----~~~lv~e~~~~ 348 (582)
.+.||+|+||+||+|++ .++.||||++.... .....+..|+..+.+++|||||+++|+|..++ ..+||||||++
T Consensus 8 ~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~-~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~ 85 (303)
T 3hmm_A 8 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE-ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEH 85 (303)
T ss_dssp EEEEEECSSSEEEEEEE-TTEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred EEEEeeCCCeEEEEEEE-CCEEEEEEEECccc-hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCC
Confidence 46899999999999998 46789999996432 12223345666677899999999999998764 57999999999
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCC-CCCCcceecCCCCCCeeecCCCceEEeeccccccc
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKS-RTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV 427 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~ 427 (582)
|+|.++++.. .++|..+++++.|+|+||+|||+++.. ...++||||||||+||||+.++.+||+|||+|+..
T Consensus 86 gsL~~~l~~~-------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 86 GSLFDYLNRY-------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp CBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred CcHHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 9999999753 488999999999999999999987200 00234999999999999999999999999999876
Q ss_pred cCcc--------cccccccccCCCCCCCC------CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCC-------CccchH
Q 047954 428 AQPI--------AAQRMISYKSPEYQSSK------KISRKSDVWSFGCLLLELLTGRISTHSAPQGI-------NGADLC 486 (582)
Q Consensus 428 ~~~~--------~~~~~~~y~aPE~~~~~------~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~-------~~~~~~ 486 (582)
.... ...||+.|||||++.+. .++.++|||||||+||||+||+.||....... ......
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence 4322 23478999999998764 36789999999999999999988775322110 011112
Q ss_pred HHHHHHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCC
Q 047954 487 SWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTE 551 (582)
Q Consensus 487 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 551 (582)
..+......+ ..++.++......+....+.+|+.+||+.||++||||.||++.|+.+.+.+
T Consensus 239 ~~~~~~~~~~----~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~ 299 (303)
T 3hmm_A 239 EEMRKVVCEQ----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp HHHHHHHTTS----CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHHHHHhcc----cCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence 2222222221 112222212223345567889999999999999999999999999987544
No 9
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=3.2e-52 Score=427.02 Aligned_cols=256 Identities=23% Similarity=0.362 Sum_probs=204.8
Q ss_pred ccccccccCceEEEEEEEcC------CceEEEEEecCCC-cchHHHHHHHHHHHhcCCC-CCccccceEEEeC-CeeEEE
Q 047954 272 PAEGLGKGIFGNSYKALLEG------RAPVVVKRLRDLK-PLITEEFRKQLLVIADQKH-PNLLPLLAYYFSN-DEKLLV 342 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H-~niv~l~~~~~~~-~~~~lv 342 (582)
..+.||+|+||+||+|.+.+ ++.||||+++... ....+.|.+|+++|.+++| ||||+++|+|... +..++|
T Consensus 68 l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV 147 (353)
T 4ase_A 68 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 147 (353)
T ss_dssp EEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEE
T ss_pred EeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEE
Confidence 35789999999999998654 2579999997543 3345679999999999966 8999999999765 568999
Q ss_pred EEeCCCCChHHHHhcCCCC----------CCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecC
Q 047954 343 YKFAGNGNLFNRIHGGKSS----------KNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDD 412 (582)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~ 412 (582)
||||++|+|.++|+..... .....+++..++.|+.|||+||+|||+++ ||||||||+|||+++
T Consensus 148 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~-------iiHRDLK~~NILl~~ 220 (353)
T 4ase_A 148 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-------CIHRDLAARNILLSE 220 (353)
T ss_dssp EECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCSGGGEEECG
T ss_pred EEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC-------eecCccCccceeeCC
Confidence 9999999999999764321 11235899999999999999999999998 999999999999999
Q ss_pred CCceEEeeccccccccCcc------cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccch
Q 047954 413 NEMVLVSDYGFSSLVAQPI------AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADL 485 (582)
Q Consensus 413 ~~~~kl~DfG~a~~~~~~~------~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~ 485 (582)
++.+||+|||+|+.+.... ...+|+.|||||++.+..|+.++|||||||+||||+| |+.||..... ...
T Consensus 221 ~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~---~~~- 296 (353)
T 4ase_A 221 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI---DEE- 296 (353)
T ss_dssp GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC---SHH-
T ss_pred CCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH---HHH-
Confidence 9999999999998764432 2346788999999999999999999999999999998 9999964321 122
Q ss_pred HHHHHHHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCC
Q 047954 486 CSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTE 551 (582)
Q Consensus 486 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 551 (582)
+...+..+......+ ....++.+++.+||+.||++||||.||+++|+.+.+..
T Consensus 297 ---~~~~i~~g~~~~~p~----------~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~ 349 (353)
T 4ase_A 297 ---FCRRLKEGTRMRAPD----------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 349 (353)
T ss_dssp ---HHHHHHHTCCCCCCT----------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred ---HHHHHHcCCCCCCCc----------cCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHh
Confidence 223333322222111 11236788999999999999999999999999886543
No 10
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=3.4e-52 Score=421.89 Aligned_cols=243 Identities=20% Similarity=0.235 Sum_probs=198.6
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCCh
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNL 351 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 351 (582)
.++||+|+||+||+|+.. +++.||||+++.... ..+|+.++++++|||||++++++.+++..|||||||++|+|
T Consensus 63 ~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L 137 (336)
T 4g3f_A 63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL 137 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBH
T ss_pred CcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcH
Confidence 467999999999999964 578999999975332 24699999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCC-ceEEeeccccccccCc
Q 047954 352 FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNE-MVLVSDYGFSSLVAQP 430 (582)
Q Consensus 352 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~-~~kl~DfG~a~~~~~~ 430 (582)
.++++... .+++..+..|+.||+.||+|||+++ ||||||||+||||+.++ .+||+|||+|+.+...
T Consensus 138 ~~~l~~~~------~l~e~~~~~~~~qi~~aL~ylH~~~-------IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~ 204 (336)
T 4g3f_A 138 GQLIKQMG------CLPEDRALYYLGQALEGLEYLHTRR-------ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD 204 (336)
T ss_dssp HHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHTTT-------EECSCCCGGGEEECTTSCCEEECCCTTCEEC---
T ss_pred HHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCC
Confidence 99997532 5899999999999999999999998 99999999999999987 5999999999876532
Q ss_pred c---------cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccc
Q 047954 431 I---------AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEI 501 (582)
Q Consensus 431 ~---------~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (582)
. ...||+.|||||++.+..|+.++|||||||++|||+||+.||..... ..+...+.. ......-
T Consensus 205 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~----~~~~~~i~~---~~~~~~~ 277 (336)
T 4g3f_A 205 GLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR----GPLCLKIAS---EPPPIRE 277 (336)
T ss_dssp ---------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCC----SCCHHHHHH---SCCGGGG
T ss_pred CcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH----HHHHHHHHc---CCCCchh
Confidence 1 23589999999999999999999999999999999999999975432 223332221 1110000
Q ss_pred cchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhccc
Q 047954 502 FDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKV 549 (582)
Q Consensus 502 ~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 549 (582)
+. ......+.+++.+||++||++|||+.|++++|.....
T Consensus 278 ~~---------~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~ 316 (336)
T 4g3f_A 278 IP---------PSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQ 316 (336)
T ss_dssp SC---------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cC---------ccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence 01 1112357789999999999999999999999987654
No 11
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=2e-51 Score=427.56 Aligned_cols=246 Identities=22% Similarity=0.318 Sum_probs=204.8
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCCh
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNL 351 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 351 (582)
.+.||+|+||+||+|+.. +++.||||++........+.+.+|+.+|++++|||||+++++|.+.+..|||||||++|+|
T Consensus 156 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L 235 (423)
T 4fie_A 156 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 235 (423)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEH
T ss_pred eeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcH
Confidence 357999999999999965 6889999999766555667799999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccCc-
Q 047954 352 FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP- 430 (582)
Q Consensus 352 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~~- 430 (582)
.+++... .+++.++..|+.||+.||+|||+++ ||||||||+||||+.++.+||+|||+|+.+...
T Consensus 236 ~~~i~~~-------~l~e~~~~~~~~qil~aL~ylH~~~-------IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~ 301 (423)
T 4fie_A 236 TDIVTHT-------RMNEEQIAAVCLAVLQALSVLHAQG-------VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 301 (423)
T ss_dssp HHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCSTTTEEECTTCCEEECCCTTCEECCSSC
T ss_pred HHHHhcc-------CCCHHHHHHHHHHHHHHHHHHHHCC-------eecccCCHHHEEEcCCCCEEEecCccceECCCCC
Confidence 9999743 3889999999999999999999998 999999999999999999999999999877543
Q ss_pred ---ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccchhhh
Q 047954 431 ---IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEIS 507 (582)
Q Consensus 431 ---~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 507 (582)
....||+.|||||++.+..|+.++|||||||++|||++|+.||... ...++...+ ..........
T Consensus 302 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~----~~~~~~~~i----~~~~~~~~~~---- 369 (423)
T 4fie_A 302 PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE----PPLKAMKMI----RDNLPPRLKN---- 369 (423)
T ss_dssp CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS----CHHHHHHHH----HHSCCCCCSC----
T ss_pred ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc----CHHHHHHHH----HcCCCCCCcc----
Confidence 2345889999999999999999999999999999999999999642 222222222 2221111111
Q ss_pred hhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 508 VQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 508 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
.. ....++.+|+.+||..||++|||+.|+++|.|..+
T Consensus 370 -~~---~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~ 406 (423)
T 4fie_A 370 -LH---KVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 406 (423)
T ss_dssp -TT---SSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGG
T ss_pred -cc---cCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcC
Confidence 00 11125778999999999999999999999987654
No 12
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2.8e-51 Score=410.31 Aligned_cols=240 Identities=22% Similarity=0.346 Sum_probs=198.1
Q ss_pred ccccccccCceEEEEEEE-cCCceEEEEEecCC---CcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCC
Q 047954 272 PAEGLGKGIFGNSYKALL-EGRAPVVVKRLRDL---KPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAG 347 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 347 (582)
..+.||+|+||+||+|+. .+++.||||++... .....+.+.+|+++|++++|||||++++++.+++..|+|||||+
T Consensus 36 i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~ 115 (311)
T 4aw0_A 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAK 115 (311)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCC
Confidence 357899999999999996 46789999999642 22345779999999999999999999999999999999999999
Q ss_pred CCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccc
Q 047954 348 NGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV 427 (582)
Q Consensus 348 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~ 427 (582)
+|+|.+++.... .+++..+..++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+.+
T Consensus 116 gG~L~~~i~~~~------~l~e~~~~~~~~qi~~al~ylH~~~-------IiHRDlKPeNILl~~~g~vKl~DFGla~~~ 182 (311)
T 4aw0_A 116 NGELLKYIRKIG------SFDETCTRFYTAEIVSALEYLHGKG-------IIHRDLKPENILLNEDMHIQITDFGTAKVL 182 (311)
T ss_dssp TEEHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred CCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------CccCCCCHHHeEEcCCCCEEEEEcCCceec
Confidence 999999997532 4889999999999999999999998 999999999999999999999999999877
Q ss_pred cCc------ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccc
Q 047954 428 AQP------IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEI 501 (582)
Q Consensus 428 ~~~------~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (582)
... ....||+.|||||++.+..|+.++||||+||++|||+||+.||... +..++...+ ..... ++
T Consensus 183 ~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~----~~~~~~~~i---~~~~~--~~ 253 (311)
T 4aw0_A 183 SPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG----NEGLIFAKI---IKLEY--DF 253 (311)
T ss_dssp CTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCS----SHHHHHHHH---HHTCC--CC
T ss_pred CCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC----CHHHHHHHH---HcCCC--CC
Confidence 432 2335899999999999999999999999999999999999999642 222222222 22211 11
Q ss_pred cchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHH
Q 047954 502 FDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSE 543 (582)
Q Consensus 502 ~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 543 (582)
...+ ..++.+|+.+||+.||++|||++|++.+
T Consensus 254 -p~~~---------s~~~~dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 254 -PEKF---------FPKARDLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp -CTTC---------CHHHHHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred -Cccc---------CHHHHHHHHHHccCCHhHCcChHHHcCC
Confidence 1111 1257789999999999999999986443
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.1e-50 Score=398.43 Aligned_cols=241 Identities=21% Similarity=0.307 Sum_probs=187.7
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCCC---cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDLK---PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 348 (582)
.+.||+|+||+||+|+. .+++.||||++.... ....+.+.+|+.+|++++|||||++++++.+.+..|+||||+ +
T Consensus 18 ~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~ 96 (275)
T 3hyh_A 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-G 96 (275)
T ss_dssp EEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-C
T ss_pred EEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-C
Confidence 46799999999999995 468899999996432 334567999999999999999999999999999999999999 6
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccccc
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~ 428 (582)
|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+|+...
T Consensus 97 g~L~~~l~~~~------~l~e~~~~~~~~qi~~al~ylH~~~-------IiHRDiKP~NILl~~~~~vkl~DFGla~~~~ 163 (275)
T 3hyh_A 97 NELFDYIVQRD------KMSEQEARRFFQQIISAVEYCHRHK-------IVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163 (275)
T ss_dssp EEHHHHHHHSC------SCCHHHHHHHHHHHHHHHHHHHHTT-------CCCCCCCTTTEEECTTCCEEECCSSCC----
T ss_pred CCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------cccccCChHHeEECCCCCEEEeecCCCeecC
Confidence 89999997542 5899999999999999999999998 9999999999999999999999999998765
Q ss_pred Cc---ccccccccccCCCCCCCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccch
Q 047954 429 QP---IAAQRMISYKSPEYQSSKKI-SRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDS 504 (582)
Q Consensus 429 ~~---~~~~~~~~y~aPE~~~~~~~-~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 504 (582)
.. ....||+.|||||++.+..| +.++||||+||++|||+||+.||... ....+.+.+. ... . .+ ..
T Consensus 164 ~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~----~~~~~~~~i~---~~~-~-~~-p~ 233 (275)
T 3hyh_A 164 DGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE----SIPVLFKNIS---NGV-Y-TL-PK 233 (275)
T ss_dssp -----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS----SHHHHHHHHH---HTC-C-CC-CT
T ss_pred CCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCC----CHHHHHHHHH---cCC-C-CC-CC
Confidence 43 23458999999999998876 58999999999999999999999642 1222222221 111 1 00 11
Q ss_pred hhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhh
Q 047954 505 EISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEI 546 (582)
Q Consensus 505 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 546 (582)
. ...++.+|+.+||+.||++|||++|+++|.|.
T Consensus 234 ~---------~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~ 266 (275)
T 3hyh_A 234 F---------LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWF 266 (275)
T ss_dssp T---------SCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHH
T ss_pred C---------CCHHHHHHHHHHccCChhHCcCHHHHHcCccc
Confidence 1 11257789999999999999999999999875
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=8.8e-51 Score=406.67 Aligned_cols=242 Identities=21% Similarity=0.333 Sum_probs=191.5
Q ss_pred cccccccCceEEEEEEEc----CCceEEEEEecCCC--cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeC
Q 047954 273 AEGLGKGIFGNSYKALLE----GRAPVVVKRLRDLK--PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFA 346 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 346 (582)
.+.||+|+||+||+|+.. .++.||||+++... ......+.+|+++|++++|||||++++++.+++..|+|||||
T Consensus 29 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~ 108 (304)
T 3ubd_A 29 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFL 108 (304)
T ss_dssp EEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEECCC
T ss_pred EEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEcC
Confidence 468999999999999863 46789999986432 223346889999999999999999999999999999999999
Q ss_pred CCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccc
Q 047954 347 GNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSL 426 (582)
Q Consensus 347 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~ 426 (582)
++|+|.+++.... .+++..+..++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+.
T Consensus 109 ~gg~L~~~l~~~~------~l~e~~~~~~~~qi~~aL~ylH~~~-------IiHRDlKp~NILl~~~g~vKl~DFGla~~ 175 (304)
T 3ubd_A 109 RGGDLFTRLSKEV------MFTEEDVKFYLAELALALDHLHSLG-------IIYRDLKPENILLDEEGHIKLTDFGLSKE 175 (304)
T ss_dssp TTCEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT-------CCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred CCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------CcCCCCCHHHeEEcCCCCEEeccccccee
Confidence 9999999997532 5889999999999999999999998 99999999999999999999999999987
Q ss_pred ccCc----ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhccccccc
Q 047954 427 VAQP----IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIF 502 (582)
Q Consensus 427 ~~~~----~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (582)
.... ....||+.|||||++.+..|+.++||||+||++|||+||+.||... +..++...+. ... . ..
T Consensus 176 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~----~~~~~~~~i~---~~~-~-~~- 245 (304)
T 3ubd_A 176 SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK----DRKETMTMIL---KAK-L-GM- 245 (304)
T ss_dssp -----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS----SHHHHHHHHH---HCC-C-CC-
T ss_pred ccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCc----CHHHHHHHHH---cCC-C-CC-
Confidence 5432 2345899999999999999999999999999999999999999642 2222222221 111 1 11
Q ss_pred chhhhhhhchHHHHHHHHHHHHHcccCCCCCCCC-----hHHHHHHHhh
Q 047954 503 DSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPE-----MAEVVSELEI 546 (582)
Q Consensus 503 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~L~~ 546 (582)
.. . ...++.+|+.+||+.||++||| ++|+++|.|.
T Consensus 246 p~------~---~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f 285 (304)
T 3ubd_A 246 PQ------F---LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFF 285 (304)
T ss_dssp CT------T---SCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGG
T ss_pred CC------c---CCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccc
Confidence 00 0 1125778999999999999998 4788888774
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2.3e-49 Score=397.79 Aligned_cols=244 Identities=22% Similarity=0.319 Sum_probs=185.5
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCC-cchHHHHHHHHHHHhcCCCCCccccceEEEeCC------------e
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK-PLITEEFRKQLLVIADQKHPNLLPLLAYYFSND------------E 338 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------------~ 338 (582)
.+.||+|+||+||+|+.. +++.||||+++... ....+.+.+|+.+|++++|||||++++++.+.+ .
T Consensus 10 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~ 89 (299)
T 4g31_A 10 IQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVY 89 (299)
T ss_dssp EEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEE
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcE
Confidence 367999999999999964 67899999986433 334567999999999999999999999987654 3
Q ss_pred eEEEEEeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEE
Q 047954 339 KLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLV 418 (582)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl 418 (582)
.|+|||||++|+|.+++..... ....++..++.|+.||+.||+|||+++ ||||||||+|||++.++.+||
T Consensus 90 l~ivmE~~~gg~L~~~l~~~~~---~~~~~~~~~~~i~~qi~~al~ylH~~~-------IiHRDlKp~NILl~~~~~vKl 159 (299)
T 4g31_A 90 LYIQMQLCRKENLKDWMNGRCT---IEERERSVCLHIFLQIAEAVEFLHSKG-------LMHRDLKPSNIFFTMDDVVKV 159 (299)
T ss_dssp EEEEEECCCSCCHHHHHHTCCS---GGGSCHHHHHHHHHHHHHHHHHHHHTT-------CCCCCCCGGGEEECTTCCEEE
T ss_pred EEEEEecCCCCcHHHHHHhcCC---CChhHHHHHHHHHHHHHHHHHHHHHCc-------CccccCcHHHeEECCCCcEEE
Confidence 6899999999999999975432 123456678899999999999999998 999999999999999999999
Q ss_pred eeccccccccCcc----------------cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCc
Q 047954 419 SDYGFSSLVAQPI----------------AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGING 482 (582)
Q Consensus 419 ~DfG~a~~~~~~~----------------~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~ 482 (582)
+|||+|+.+.... ...||+.|||||++.+..|+.++|||||||++|||++ ||.. .
T Consensus 160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~------~ 230 (299)
T 4g31_A 160 GDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFST------Q 230 (299)
T ss_dssp CCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSS------H
T ss_pred ccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCC------c
Confidence 9999998765421 1248899999999999999999999999999999996 7742 1
Q ss_pred cchHHHHHHHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhh
Q 047954 483 ADLCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEI 546 (582)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 546 (582)
.+....+... .....+. ........+.+|+.+||+.||++|||+.|+++|.+.
T Consensus 231 ~~~~~~~~~~-~~~~~p~----------~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~ 283 (299)
T 4g31_A 231 MERVRTLTDV-RNLKFPP----------LFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVF 283 (299)
T ss_dssp HHHHHHHHHH-HTTCCCH----------HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGG
T ss_pred cHHHHHHHHH-hcCCCCC----------CCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhh
Confidence 1111111111 1111111 111222346679999999999999999999987653
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=3e-46 Score=389.31 Aligned_cols=257 Identities=19% Similarity=0.284 Sum_probs=196.8
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCC--cchHHHHHHHHHHHhcCCCCCccccceEEEeC------CeeEEEE
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK--PLITEEFRKQLLVIADQKHPNLLPLLAYYFSN------DEKLLVY 343 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~------~~~~lv~ 343 (582)
.+.||+|+||+||+|+.. +++.||||+++... ....+.+.+|+++|++++|||||++++++... +..||||
T Consensus 59 ~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivm 138 (398)
T 4b99_A 59 IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVL 138 (398)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEE
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEE
Confidence 468999999999999964 68899999997543 23446788999999999999999999988643 5689999
Q ss_pred EeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccc
Q 047954 344 KFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGF 423 (582)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~ 423 (582)
|||. |+|.+++... ..+++..+..|+.||+.||+|||+++ ||||||||+|||++.++.+||+|||+
T Consensus 139 E~~~-g~L~~~i~~~------~~l~~~~~~~~~~qil~al~ylH~~~-------iiHRDlKP~NIl~~~~~~~Ki~DFGl 204 (398)
T 4b99_A 139 DLME-SDLHQIIHSS------QPLTLEHVRYFLYQLLRGLKYMHSAQ-------VIHRDLKPSNLLVNENCELKIGDFGM 204 (398)
T ss_dssp ECCS-EEHHHHHTSS------SCCCHHHHHHHHHHHHHHHHHHHHTT-------CBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred eCCC-CCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCc-------CcCCCcCccccccCCCCCEEEeecce
Confidence 9995 7899999643 25899999999999999999999998 99999999999999999999999999
Q ss_pred cccccCc--------ccccccccccCCCCCCCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHh
Q 047954 424 SSLVAQP--------IAAQRMISYKSPEYQSSK-KISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVR 494 (582)
Q Consensus 424 a~~~~~~--------~~~~~~~~y~aPE~~~~~-~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 494 (582)
|+.+... ....||+.|||||++.+. .++.++||||+||++|||++|+.||... +..+....+.....
T Consensus 205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~----~~~~~l~~I~~~~g 280 (398)
T 4b99_A 205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK----NYVHQLQLIMMVLG 280 (398)
T ss_dssp CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCS----SHHHHHHHHHHHHC
T ss_pred eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCC----CHHHHHHHHHHhcC
Confidence 9876432 234588999999998775 5699999999999999999999999643 22223332222211
Q ss_pred hcccccccch---------------hh--hhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 495 EEWTAEIFDS---------------EI--SVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 495 ~~~~~~~~d~---------------~~--~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
... .+.... .. ...........++.+|+.+||..||++|||++|+++|.|.-.
T Consensus 281 ~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~ 350 (398)
T 4b99_A 281 TPS-PAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK 350 (398)
T ss_dssp CCC-GGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTT
T ss_pred CCC-hHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCc
Confidence 100 000000 00 000000011235778999999999999999999999988654
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=4.7e-46 Score=383.70 Aligned_cols=253 Identities=15% Similarity=0.248 Sum_probs=192.5
Q ss_pred cccccccCceEEEEEEEc----CCceEEEEEecCCCcchHHHHHHHHHHHhcC-CCCCccccceEEEeCCeeEEEEEeCC
Q 047954 273 AEGLGKGIFGNSYKALLE----GRAPVVVKRLRDLKPLITEEFRKQLLVIADQ-KHPNLLPLLAYYFSNDEKLLVYKFAG 347 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~ 347 (582)
.+.||+|+||+||+|+.+ .++.||||++.... ....+.+|+++|.++ +|||||++++++.+.+..++|||||+
T Consensus 26 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~ 103 (361)
T 4f9c_A 26 EDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLE 103 (361)
T ss_dssp EEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCC
T ss_pred EEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCC
Confidence 467999999999999853 45789999986543 345688999999988 69999999999999999999999999
Q ss_pred CCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCC-CceEEeecccccc
Q 047954 348 NGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDN-EMVLVSDYGFSSL 426 (582)
Q Consensus 348 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~-~~~kl~DfG~a~~ 426 (582)
+|+|.+++. .+++.++..++.||+.||+|||+++ ||||||||+|||++.+ +.+||+|||+|+.
T Consensus 104 g~~L~~~~~---------~l~~~~~~~~~~qll~al~ylH~~g-------IiHRDiKPeNiLl~~~~~~~kl~DFGla~~ 167 (361)
T 4f9c_A 104 HESFLDILN---------SLSFQEVREYMLNLFKALKRIHQFG-------IVHRDVKPSNFLYNRRLKKYALVDFGLAQG 167 (361)
T ss_dssp CCCHHHHHT---------TCCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred cccHHHHHc---------CCCHHHHHHHHHHHHHHHHHHHHCC-------eEeCcCCHHHeEEeCCCCeEEECcCCCCcc
Confidence 999999984 3788899999999999999999998 9999999999999876 7999999999975
Q ss_pred ccCcc--------------------------------cccccccccCCCCCCCC-CCCcchhHHHHHHHHHHHHhCCCCC
Q 047954 427 VAQPI--------------------------------AAQRMISYKSPEYQSSK-KISRKSDVWSFGCLLLELLTGRIST 473 (582)
Q Consensus 427 ~~~~~--------------------------------~~~~~~~y~aPE~~~~~-~~~~k~DVwS~Gvvl~elltG~~P~ 473 (582)
..... ...||+.|+|||++.+. .|+.++||||+||++|||+||+.||
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf 247 (361)
T 4f9c_A 168 THDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247 (361)
T ss_dssp CTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSS
T ss_pred cCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCC
Confidence 43211 12478999999998775 5899999999999999999999999
Q ss_pred CCCCCCCCccchHHHHHHHHhhc--------ccc------ccc--------------c---hhhh--------hhhchHH
Q 047954 474 HSAPQGINGADLCSWVLRAVREE--------WTA------EIF--------------D---SEIS--------VQRSAAH 514 (582)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~------~~~--------------d---~~~~--------~~~~~~~ 514 (582)
.... +..+....+....... ... +.. + +... .......
T Consensus 248 ~~~~---~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 324 (361)
T 4f9c_A 248 YKAS---DDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNE 324 (361)
T ss_dssp SCCS---SHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTT
T ss_pred CCCC---CHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhcccccccccccccccccccccccccc
Confidence 6432 2222222221111000 000 000 0 0000 0000001
Q ss_pred HHHHHHHHHHHcccCCCCCCCChHHHHHHHhh
Q 047954 515 GMLKLLQVAIQCCNKSPEKRPEMAEVVSELEI 546 (582)
Q Consensus 515 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 546 (582)
...++.+|+.+||+.||++|||++|+++|.|.
T Consensus 325 is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f 356 (361)
T 4f9c_A 325 VPDEAYDLLDKLLDLNPASRITAEEALLHPFF 356 (361)
T ss_dssp CCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGG
T ss_pred CCHHHHHHHHHHCcCChhHCcCHHHHhcCccc
Confidence 12357789999999999999999999999774
No 18
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.3e-45 Score=402.77 Aligned_cols=248 Identities=19% Similarity=0.313 Sum_probs=203.9
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCCh
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNL 351 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 351 (582)
.+.||+|+||.||+|... +++.||+|++........+.+.+|+.+|++++|||||+++++|.+....++|||||++|+|
T Consensus 162 ~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L 241 (573)
T 3uto_A 162 HEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL 241 (573)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCBH
T ss_pred EEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCcH
Confidence 567999999999999964 6889999999776666677899999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCC--CceEEeeccccccccC
Q 047954 352 FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDN--EMVLVSDYGFSSLVAQ 429 (582)
Q Consensus 352 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~--~~~kl~DfG~a~~~~~ 429 (582)
.+++.... ..+++.++..++.||+.||+|||+++ |+||||||+|||++.+ +.+||+|||+|+.+..
T Consensus 242 ~~~i~~~~-----~~l~e~~~~~~~~qi~~al~ylH~~~-------iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~ 309 (573)
T 3uto_A 242 FEKVADEH-----NKMSEDEAVEYMRQVCKGLCHMHENN-------YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 309 (573)
T ss_dssp HHHHTCTT-----SCEEHHHHHHHHHHHHHHHHHHHHTT-------EECCCCCGGGEEESSSSCCCEEECCCSSCEECCT
T ss_pred HHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHHCC-------eeeccCChhhccccCCCCCCEEEeeccceeEccC
Confidence 99996432 24899999999999999999999998 9999999999999854 7899999999998765
Q ss_pred cc---cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccchhh
Q 047954 430 PI---AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEI 506 (582)
Q Consensus 430 ~~---~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 506 (582)
.. ...||+.|||||++.+..|+.++||||+||++|||++|+.||... ...+... ......+. ..+...
T Consensus 310 ~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~----~~~~~~~---~i~~~~~~--~~~~~~ 380 (573)
T 3uto_A 310 KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGE----NDDETLR---NVKSCDWN--MDDSAF 380 (573)
T ss_dssp TSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS----SHHHHHH---HHHTTCCC--CCSGGG
T ss_pred CCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc----CHHHHHH---HHHhCCCC--CCcccc
Confidence 43 335889999999999999999999999999999999999999643 2222222 22221111 001100
Q ss_pred hhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhc
Q 047954 507 SVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547 (582)
Q Consensus 507 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 547 (582)
.....++.+|+.+||+.||++|||+.|+++|.|.-
T Consensus 381 ------~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~ 415 (573)
T 3uto_A 381 ------SGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLT 415 (573)
T ss_dssp ------TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTS
T ss_pred ------cCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcC
Confidence 01112577899999999999999999999998744
No 19
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.2e-44 Score=368.98 Aligned_cols=268 Identities=29% Similarity=0.513 Sum_probs=221.9
Q ss_pred cccccccCceEEEEEEEcCCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCChH
Q 047954 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLF 352 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 352 (582)
.+.||+|+||.||+|...++..||||++........+.+.+|+.++++++||||+++++++...+..++||||+++|+|.
T Consensus 44 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 123 (321)
T 2qkw_B 44 KFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLK 123 (321)
T ss_dssp CCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTG
T ss_pred cceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHH
Confidence 46799999999999998889999999988766667788999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccCc--
Q 047954 353 NRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP-- 430 (582)
Q Consensus 353 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~~-- 430 (582)
+++..... ....+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 124 ~~l~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~-------ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 194 (321)
T 2qkw_B 124 RHLYGSDL--PTMSMSWEQRLEICIGAARGLHYLHTRA-------IIHRDVKSINILLDENFVPKITDFGISKKGTELDQ 194 (321)
T ss_dssp GGSSSSCC--CSCCCCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCCSTTEEECTTCCEEECCCTTCEECSSSSC
T ss_pred HHHhccCC--CccccCHHHHHHHHHHHHHHHHHhcCCC-------eecCCCCHHHEEECCCCCEEEeecccccccccccc
Confidence 99865432 2235899999999999999999999998 999999999999999999999999999765322
Q ss_pred ----ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccchhh
Q 047954 431 ----IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEI 506 (582)
Q Consensus 431 ----~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 506 (582)
....++..|+|||++.+..++.++|||||||++|||+||+.||...... .......|.............+++..
T Consensus 195 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (321)
T 2qkw_B 195 THLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR-EMVNLAEWAVESHNNGQLEQIVDPNL 273 (321)
T ss_dssp CCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSS-SCCCHHHHTHHHHTTTCCCSSSSSSC
T ss_pred cccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcH-HHHHHHHHhhhccccccHHHhcChhh
Confidence 1233678899999998889999999999999999999999999764432 33345555544444444444444433
Q ss_pred hhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCC
Q 047954 507 SVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTE 551 (582)
Q Consensus 507 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 551 (582)
. .....+....+.+++.+||+.||++|||+.|++++|+.+....
T Consensus 274 ~-~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~ 317 (321)
T 2qkw_B 274 A-DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317 (321)
T ss_dssp T-TCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred c-cccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence 2 1223456678999999999999999999999999999886543
No 20
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=5.5e-45 Score=395.78 Aligned_cols=245 Identities=20% Similarity=0.239 Sum_probs=194.8
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCC---cchHH---HHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEe
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK---PLITE---EFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKF 345 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~---~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 345 (582)
.+.||+|+||+||+|+.. +++.||||++.... ..... ..+.++.+++.++|||||+++++|.+.+..|+||||
T Consensus 194 ~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy 273 (689)
T 3v5w_A 194 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDL 273 (689)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEec
Confidence 478999999999999965 58899999985321 11122 233456777888999999999999999999999999
Q ss_pred CCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccc
Q 047954 346 AGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSS 425 (582)
Q Consensus 346 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~ 425 (582)
|+||+|.+++.... .+++..+..|+.||+.||+|||+++ ||||||||+||||+.++.+||+|||+|+
T Consensus 274 ~~GGdL~~~l~~~~------~l~E~~a~~y~~qIl~aL~yLH~~g-------IiHRDLKPeNILld~~G~vKL~DFGlA~ 340 (689)
T 3v5w_A 274 MNGGDLHYHLSQHG------VFSEADMRFYAAEIILGLEHMHNRF-------VVYRDLKPANILLDEHGHVRISDLGLAC 340 (689)
T ss_dssp CCSCBHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHTTT-------EECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------ccccCCchHHeEEeCCCCEEecccceee
Confidence 99999999997532 4889999999999999999999998 9999999999999999999999999998
Q ss_pred cccCc--ccccccccccCCCCCC-CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhccccccc
Q 047954 426 LVAQP--IAAQRMISYKSPEYQS-SKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIF 502 (582)
Q Consensus 426 ~~~~~--~~~~~~~~y~aPE~~~-~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (582)
.+... ....||+.|||||++. +..|+.++||||+||++|||++|+.||..... .+............ . .+.
T Consensus 341 ~~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~----~~~~~i~~~i~~~~-~-~~p 414 (689)
T 3v5w_A 341 DFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT----KDKHEIDRMTLTMA-V-ELP 414 (689)
T ss_dssp ECSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGC----CCHHHHHHHHHHCC-C-CCC
T ss_pred ecCCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHHhhcCCC-C-CCC
Confidence 77543 3456899999999986 45799999999999999999999999964321 11211111111111 0 110
Q ss_pred chhhhhhhchHHHHHHHHHHHHHcccCCCCCCCC-----hHHHHHHHhh
Q 047954 503 DSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPE-----MAEVVSELEI 546 (582)
Q Consensus 503 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~L~~ 546 (582)
.. ...++.+|+.+||..||++|++ ++||++|.|.
T Consensus 415 -~~---------~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF 453 (689)
T 3v5w_A 415 -DS---------FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 453 (689)
T ss_dssp -TT---------SCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGG
T ss_pred -cc---------CCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccc
Confidence 00 1125778999999999999998 7999999874
No 21
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.9e-44 Score=368.32 Aligned_cols=285 Identities=33% Similarity=0.503 Sum_probs=225.0
Q ss_pred CCCChhHhhhcc-----cccccccCceEEEEEEEcCCceEEEEEecCCCc-chHHHHHHHHHHHhcCCCCCccccceEEE
Q 047954 261 AGFKLNDLLKAP-----AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKP-LITEEFRKQLLVIADQKHPNLLPLLAYYF 334 (582)
Q Consensus 261 ~~~~~~~l~~~~-----~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~ 334 (582)
..|++.++..+. .+.||+|+||.||+|...+++.||||++..... .....+.+|+.++++++||||+++++++.
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 97 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 97 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEEC
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEe
Confidence 456677776654 367999999999999988899999999975432 22336899999999999999999999999
Q ss_pred eCCeeEEEEEeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCC
Q 047954 335 SNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNE 414 (582)
Q Consensus 335 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~ 414 (582)
.....++||||+++|+|.+++...... ...+++..+..++.|++.||+|||+.. .++|+||||||+|||++.++
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~----~~~ivH~Dlkp~Nil~~~~~ 171 (326)
T 3uim_A 98 TPTERLLVYPYMANGSVASCLRERPES--QPPLDWPKRQRIALGSARGLAYLHDHC----DPKIIHRDVKAANILLDEEF 171 (326)
T ss_dssp CSSCCEEEEECCTTCBHHHHHHCCSTT--CCCCCHHHHHHHHHHHHHHHHHHHHSS----SSCEECCCCSGGGEEECTTC
T ss_pred cCCceEEEEEeccCCCHHHHHHhcccc--CCCCCHHHHHHHHHHHHHHHHHHHhCC----CCCeEeCCCchhhEEECCCC
Confidence 999999999999999999999865432 345899999999999999999999982 11299999999999999999
Q ss_pred ceEEeeccccccccCcc-----cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC-CCCccchHHH
Q 047954 415 MVLVSDYGFSSLVAQPI-----AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQ-GINGADLCSW 488 (582)
Q Consensus 415 ~~kl~DfG~a~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~-~~~~~~~~~~ 488 (582)
.+||+|||+++...... ...+++.|+|||++.+..++.++|||||||++|||+||+.||..... .........|
T Consensus 172 ~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 251 (326)
T 3uim_A 172 EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW 251 (326)
T ss_dssp CEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHH
T ss_pred CEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHH
Confidence 99999999998764321 23378899999999888899999999999999999999999963211 1123344555
Q ss_pred HHHHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCCC
Q 047954 489 VLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTES 552 (582)
Q Consensus 489 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 552 (582)
+...........+.+.... ..........+.+++.+||+.||++|||+.||+++|+.....+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~~~ 314 (326)
T 3uim_A 252 VKGLLKEKKLEALVDVDLQ-GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAER 314 (326)
T ss_dssp HTTTTSSCCSTTSSCTTCT-TSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCSSS
T ss_pred HHHHhhchhhhhhcChhhc-cccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchhhh
Confidence 5444444434444443332 22345566789999999999999999999999999998665543
No 22
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.9e-43 Score=358.36 Aligned_cols=250 Identities=24% Similarity=0.412 Sum_probs=205.3
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCCh
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNL 351 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 351 (582)
.+.||+|+||.||+|... ++..||+|++........+.+.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 15 ~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 94 (310)
T 3s95_A 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTL 94 (310)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred cceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcH
Confidence 578999999999999975 5788999998776666778899999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccCcc
Q 047954 352 FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI 431 (582)
Q Consensus 352 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~~~ 431 (582)
.+++..... .+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 95 ~~~l~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~~-------ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 162 (310)
T 3s95_A 95 RGIIKSMDS-----QYPWSQRVSFAKDIASGMAYLHSMN-------IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK 162 (310)
T ss_dssp HHHHHHCCT-----TSCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCSTTSEEECTTSCEEECCCTTCEECC---
T ss_pred HHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhCC-------ccCCCCCcCeEEECCCCCEEEeecccceeccccc
Confidence 999976432 4889999999999999999999998 9999999999999999999999999997764321
Q ss_pred ------------------cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHH
Q 047954 432 ------------------AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493 (582)
Q Consensus 432 ------------------~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 493 (582)
...+|+.|+|||.+.+..++.++|||||||++|||++|..|+............ ......
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~--~~~~~~ 240 (310)
T 3s95_A 163 TQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGL--NVRGFL 240 (310)
T ss_dssp -----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSB--CHHHHH
T ss_pred ccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhh--hhhccc
Confidence 234788899999999999999999999999999999999998654322111110 011111
Q ss_pred hhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccC
Q 047954 494 REEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVT 550 (582)
Q Consensus 494 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 550 (582)
....... ....+.+++.+||+.||++|||+.++++.|+.++..
T Consensus 241 ~~~~~~~--------------~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~ 283 (310)
T 3s95_A 241 DRYCPPN--------------CPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283 (310)
T ss_dssp HHTCCTT--------------CCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cccCCCC--------------CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 1111111 112577899999999999999999999999988743
No 23
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=3e-43 Score=354.82 Aligned_cols=246 Identities=23% Similarity=0.353 Sum_probs=201.9
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCCh
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNL 351 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 351 (582)
.+.||+|+||+||+|.. .+++.||||++........+.+.+|+.++++++||||+++++++...+..++||||+++|+|
T Consensus 25 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (297)
T 3fxz_A 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104 (297)
T ss_dssp CEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred eeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCH
Confidence 46799999999999985 56889999999765555677899999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccCc-
Q 047954 352 FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP- 430 (582)
Q Consensus 352 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~~- 430 (582)
.+++... .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 105 ~~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~~-------i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (297)
T 3fxz_A 105 TDVVTET-------CMDEGQIAAVCRECLQALEFLHSNQ-------VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170 (297)
T ss_dssp HHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCSGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred HHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHhCC-------ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc
Confidence 9999753 3788999999999999999999998 999999999999999999999999998776543
Q ss_pred ---ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccchhhh
Q 047954 431 ---IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEIS 507 (582)
Q Consensus 431 ---~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 507 (582)
....+++.|+|||.+.+..++.++|||||||++|||+||+.||.... ............ ......+
T Consensus 171 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-------~~~~~~~~~~~~-~~~~~~~--- 239 (297)
T 3fxz_A 171 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN-------PLRALYLIATNG-TPELQNP--- 239 (297)
T ss_dssp CCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-------HHHHHHHHHHHC-SCCCSCG---
T ss_pred cccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHHHhCC-CCCCCCc---
Confidence 23357889999999999999999999999999999999999996421 111111111111 1111111
Q ss_pred hhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 508 VQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 508 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
......+.+++.+||+.||++|||+.|+++|.+.-.
T Consensus 240 -----~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~ 275 (297)
T 3fxz_A 240 -----EKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKI 275 (297)
T ss_dssp -----GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGG
T ss_pred -----cccCHHHHHHHHHHccCChhHCcCHHHHhhChhhcc
Confidence 011225778999999999999999999999877543
No 24
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=9e-43 Score=355.28 Aligned_cols=246 Identities=21% Similarity=0.314 Sum_probs=203.6
Q ss_pred ccccccCceEEEEEEEc-CCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCChH
Q 047954 274 EGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLF 352 (582)
Q Consensus 274 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 352 (582)
+.||+|+||.||+|... +++.||||++........+.+.+|+.++++++||||+++++++...+..++||||+++|+|.
T Consensus 51 ~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 130 (321)
T 2c30_A 51 VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALT 130 (321)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBHH
T ss_pred EEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCHH
Confidence 47999999999999976 68899999998666666788999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccCc--
Q 047954 353 NRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP-- 430 (582)
Q Consensus 353 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~~-- 430 (582)
+++... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 131 ~~l~~~-------~l~~~~~~~i~~qi~~~L~~LH~~~-------ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 196 (321)
T 2c30_A 131 DIVSQV-------RLNEEQIATVCEAVLQALAYLHAQG-------VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP 196 (321)
T ss_dssp HHHTTC-------CCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC
T ss_pred HHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHCC-------eecCCCCHHHEEECCCCcEEEeeeeeeeecccCcc
Confidence 998632 4889999999999999999999998 999999999999999999999999998776443
Q ss_pred --ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccchhhhh
Q 047954 431 --IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISV 508 (582)
Q Consensus 431 --~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 508 (582)
....+++.|+|||++.+..++.++|||||||++|||++|+.||.... .......+ ..........
T Consensus 197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~----~~~~~~~~----~~~~~~~~~~----- 263 (321)
T 2c30_A 197 KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDS----PVQAMKRL----RDSPPPKLKN----- 263 (321)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC----HHHHHHHH----HHSSCCCCTT-----
T ss_pred ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHH----hcCCCCCcCc-----
Confidence 23457889999999999999999999999999999999999996421 11121111 1111111110
Q ss_pred hhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhccc
Q 047954 509 QRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKV 549 (582)
Q Consensus 509 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 549 (582)
.. .....+.+++.+||+.||++|||+.|++++.+....
T Consensus 264 ~~---~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 301 (321)
T 2c30_A 264 SH---KVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQT 301 (321)
T ss_dssp GG---GSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGC
T ss_pred cc---cCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccC
Confidence 00 111257789999999999999999999999887653
No 25
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=2.5e-43 Score=366.44 Aligned_cols=255 Identities=22% Similarity=0.376 Sum_probs=204.3
Q ss_pred ccccccccCceEEEEEEEc--------CCceEEEEEecCCC-cchHHHHHHHHHHHhcC-CCCCccccceEEEeCCeeEE
Q 047954 272 PAEGLGKGIFGNSYKALLE--------GRAPVVVKRLRDLK-PLITEEFRKQLLVIADQ-KHPNLLPLLAYYFSNDEKLL 341 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 341 (582)
..+.||+|+||.||+|... ++..||||+++... ....+.+.+|+.+++++ +||||++++++|...+..++
T Consensus 85 ~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~l 164 (370)
T 2psq_A 85 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 164 (370)
T ss_dssp EEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEE
T ss_pred eeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEE
Confidence 3578999999999999863 34569999997543 23456789999999999 89999999999999999999
Q ss_pred EEEeCCCCChHHHHhcCCCC----------CCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeec
Q 047954 342 VYKFAGNGNLFNRIHGGKSS----------KNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLD 411 (582)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~ 411 (582)
||||+++|+|.+++...... .....+++..++.++.||+.||+|||+++ |+||||||+|||++
T Consensus 165 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-------ivHrDlkp~NIll~ 237 (370)
T 2psq_A 165 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-------CIHRDLAARNVLVT 237 (370)
T ss_dssp EEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCCGGGEEEC
T ss_pred EEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-------eeccccchhhEEEC
Confidence 99999999999999865421 01234788999999999999999999998 99999999999999
Q ss_pred CCCceEEeeccccccccCc------ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccc
Q 047954 412 DNEMVLVSDYGFSSLVAQP------IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGAD 484 (582)
Q Consensus 412 ~~~~~kl~DfG~a~~~~~~------~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~ 484 (582)
.++.+||+|||+++..... ....+++.|+|||++.+..++.++|||||||++|||+| |+.||... ...+
T Consensus 238 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~----~~~~ 313 (370)
T 2psq_A 238 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI----PVEE 313 (370)
T ss_dssp TTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC----CGGG
T ss_pred CCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCC----CHHH
Confidence 9999999999999866432 22334578999999999999999999999999999999 99999643 2223
Q ss_pred hHHHHHHHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCC
Q 047954 485 LCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTE 551 (582)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 551 (582)
+...+ ......... .....++.+++.+||+.||++|||+.|++++|+.+....
T Consensus 314 ~~~~~----~~~~~~~~~----------~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~ 366 (370)
T 2psq_A 314 LFKLL----KEGHRMDKP----------ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 366 (370)
T ss_dssp HHHHH----HTTCCCCCC----------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHH----hcCCCCCCC----------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 32222 222111110 111235788999999999999999999999999886543
No 26
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=5.2e-43 Score=355.05 Aligned_cols=254 Identities=27% Similarity=0.390 Sum_probs=196.3
Q ss_pred ccccccccCceEEEEEEEcCCceEEEEEecCCC--cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCC
Q 047954 272 PAEGLGKGIFGNSYKALLEGRAPVVVKRLRDLK--PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNG 349 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 349 (582)
..+.||+|+||.||+|.. .+..||||++.... ....+.+.+|+.++++++||||+++++++...+..++||||+++|
T Consensus 41 i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 119 (309)
T 3p86_A 41 IKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRG 119 (309)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTC
T ss_pred eeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCC
Confidence 357899999999999987 56779999986543 233467899999999999999999999999999999999999999
Q ss_pred ChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccC
Q 047954 350 NLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ 429 (582)
Q Consensus 350 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~ 429 (582)
+|.+++..... ...+++..++.++.||+.||+|||+.++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 120 ~L~~~l~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~~-----~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~ 191 (309)
T 3p86_A 120 SLYRLLHKSGA---REQLDERRRLSMAYDVAKGMNYLHNRNP-----PIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS 191 (309)
T ss_dssp BHHHHHHSTTH---HHHSCHHHHHHHHHHHHHHHHHHHTSSS-----CCCCTTCCGGGEEECTTCCEEECCCC-------
T ss_pred cHHHHHhhcCC---CCCCCHHHHHHHHHHHHHHHHHHHcCCC-----CEECCCCChhhEEEeCCCcEEECCCCCCccccc
Confidence 99999975421 1248899999999999999999999863 499999999999999999999999999976543
Q ss_pred c----ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccchh
Q 047954 430 P----IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSE 505 (582)
Q Consensus 430 ~----~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 505 (582)
. ....++..|+|||.+.+..++.++|||||||++|||+||+.||.... .......+ ........+ ..
T Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~----~~~~~~~~---~~~~~~~~~-~~- 262 (309)
T 3p86_A 192 TFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLN----PAQVVAAV---GFKCKRLEI-PR- 262 (309)
T ss_dssp ----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSC----HHHHHHHH---HHSCCCCCC-CT-
T ss_pred cccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHH---HhcCCCCCC-Cc-
Confidence 3 23457889999999999999999999999999999999999996421 11111111 111111111 00
Q ss_pred hhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCC
Q 047954 506 ISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTE 551 (582)
Q Consensus 506 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 551 (582)
....++.+++.+||+.||++|||+.++++.|+.+....
T Consensus 263 --------~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 263 --------NLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp --------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred --------cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 11125788999999999999999999999999887544
No 27
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2.6e-43 Score=359.43 Aligned_cols=258 Identities=19% Similarity=0.235 Sum_probs=198.9
Q ss_pred cccccccCceEEEEEEEcCCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCC----eeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSND----EKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~----~~~lv~e~~~~ 348 (582)
.+.||+|+||+||+|+.. ++.||||++.... .....+..|+.++++++|||||++++++.... ..++||||+++
T Consensus 29 ~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~ 106 (322)
T 3soc_A 29 LEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEK 106 (322)
T ss_dssp EEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred hheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCC
Confidence 467999999999999876 6789999996432 23445667899999999999999999998754 36999999999
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhcc----------CCCCCCCcceecCCCCCCeeecCCCceEE
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK----------DKSRTQSAVIHGNLKSTNILLDDNEMVLV 418 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~----------~~~~~~~~ivH~Dlkp~NILl~~~~~~kl 418 (582)
|+|.+++... .+++..++.++.|++.||+|||+. + |+||||||+|||++.++.+||
T Consensus 107 g~L~~~l~~~-------~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~-------ivH~Dlkp~Nill~~~~~~kL 172 (322)
T 3soc_A 107 GSLSDFLKAN-------VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA-------ISHRDIKSKNVLLKNNLTACI 172 (322)
T ss_dssp CBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE-------EECSCCSGGGEEECTTCCEEE
T ss_pred CCHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC-------EEeCCCChHhEEECCCCeEEE
Confidence 9999999753 388999999999999999999998 6 999999999999999999999
Q ss_pred eeccccccccCcc------cccccccccCCCCCCCC-----CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccc---
Q 047954 419 SDYGFSSLVAQPI------AAQRMISYKSPEYQSSK-----KISRKSDVWSFGCLLLELLTGRISTHSAPQGINGAD--- 484 (582)
Q Consensus 419 ~DfG~a~~~~~~~------~~~~~~~y~aPE~~~~~-----~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~--- 484 (582)
+|||+++...... ...+++.|+|||++.+. .++.++|||||||++|||+||+.||...........
T Consensus 173 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 252 (322)
T 3soc_A 173 ADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEE 252 (322)
T ss_dssp CCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHH
T ss_pred ccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhh
Confidence 9999997654322 23578899999998763 456789999999999999999999975432211000
Q ss_pred -----hHHHHHHHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccC
Q 047954 485 -----LCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVT 550 (582)
Q Consensus 485 -----~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 550 (582)
....+............+.. .........++.+++.+||+.||++|||+.||++.|+.++..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 253 IGQHPSLEDMQEVVVHKKKRPVLRD----YWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp HCSSCCHHHHHHHHTTSCCCCCCCG----GGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hccCCchhhhhhhhhcccCCCCccc----cccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 01111111111111111111 111223445688999999999999999999999999988653
No 28
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.3e-42 Score=354.90 Aligned_cols=244 Identities=22% Similarity=0.352 Sum_probs=199.9
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCC--CcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCC
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDL--KPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNG 349 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 349 (582)
.+.||+|+||.||+|.. .+++.||||++... .....+.+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 20 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~ 99 (328)
T 3fe3_A 20 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGG 99 (328)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCC
Confidence 46799999999999997 57889999998643 3344567889999999999999999999999999999999999999
Q ss_pred ChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccC
Q 047954 350 NLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ 429 (582)
Q Consensus 350 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~ 429 (582)
+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 100 ~L~~~l~~~~------~l~~~~~~~~~~qi~~al~~lH~~~-------ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 166 (328)
T 3fe3_A 100 EVFDYLVAHG------RMKEKEARSKFRQIVSAVQYCHQKR-------IVHRDLKAENLLLDADMNIKIADFGFSNEFTV 166 (328)
T ss_dssp BHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred cHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------EeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence 9999996532 4888999999999999999999998 99999999999999999999999999976644
Q ss_pred c---ccccccccccCCCCCCCCCCC-cchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccchh
Q 047954 430 P---IAAQRMISYKSPEYQSSKKIS-RKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSE 505 (582)
Q Consensus 430 ~---~~~~~~~~y~aPE~~~~~~~~-~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 505 (582)
. ....+++.|+|||++.+..++ .++||||+||++|||++|+.||... ....+.. ......... ..
T Consensus 167 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~----~~~~~~~---~i~~~~~~~---p~- 235 (328)
T 3fe3_A 167 GGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ----NLKELRE---RVLRGKYRI---PF- 235 (328)
T ss_dssp SCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCS----SHHHHHH---HHHHCCCCC---CT-
T ss_pred CCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCC----CHHHHHH---HHHhCCCCC---CC-
Confidence 3 234578899999999887765 7999999999999999999999642 1122222 222211110 00
Q ss_pred hhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 506 ISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 506 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
....++.+++.+||..||++|||++|+++|.|...
T Consensus 236 --------~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~ 270 (328)
T 3fe3_A 236 --------YMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINA 270 (328)
T ss_dssp --------TSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTT
T ss_pred --------CCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcC
Confidence 01125778999999999999999999999987643
No 29
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=7.3e-43 Score=346.55 Aligned_cols=246 Identities=25% Similarity=0.450 Sum_probs=203.1
Q ss_pred cccccccCceEEEEEEEcCCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCChH
Q 047954 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLF 352 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 352 (582)
.+.||+|+||.||+|...++..||+|++.... ...+.+.+|+.++++++||||+++++++.+....++||||+++|+|.
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 93 (269)
T 4hcu_A 15 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 93 (269)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred eheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHH
Confidence 46799999999999999888899999997543 34577999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccCc--
Q 047954 353 NRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP-- 430 (582)
Q Consensus 353 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~~-- 430 (582)
+++..... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 94 ~~l~~~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~-------i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 161 (269)
T 4hcu_A 94 DYLRTQRG-----LFAAETLLGMCLDVCEGMAYLEEAC-------VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 161 (269)
T ss_dssp HHHHTTTT-----CCCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred HHHHhcCc-----ccCHHHHHHHHHHHHHHHHHHHhCC-------eecCCcchheEEEcCCCCEEecccccccccccccc
Confidence 99975432 4889999999999999999999998 999999999999999999999999999876443
Q ss_pred ---ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHHHHHHhhcccccccchhh
Q 047954 431 ---IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEI 506 (582)
Q Consensus 431 ---~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 506 (582)
....++..|+|||.+.+..++.++||||||+++|||++ |+.||.... ..++...+ ....... .+.
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~----~~~~~~~~----~~~~~~~--~~~- 230 (269)
T 4hcu_A 162 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS----NSEVVEDI----STGFRLY--KPR- 230 (269)
T ss_dssp HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC----HHHHHHHH----HTTCCCC--CCT-
T ss_pred ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCC----HHHHHHHH----hcCccCC--CCC-
Confidence 22334567999999988899999999999999999999 999996421 12222211 1111110 000
Q ss_pred hhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhccc
Q 047954 507 SVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKV 549 (582)
Q Consensus 507 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 549 (582)
.....+.+++.+||+.||++|||+.|++++|+.+..
T Consensus 231 -------~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 231 -------LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp -------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -------cCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 011257889999999999999999999999998864
No 30
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=5.4e-43 Score=357.55 Aligned_cols=248 Identities=25% Similarity=0.391 Sum_probs=200.4
Q ss_pred cccccccCceEEEEEEEc----CCceEEEEEecCC-CcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCC
Q 047954 273 AEGLGKGIFGNSYKALLE----GRAPVVVKRLRDL-KPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAG 347 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 347 (582)
.+.||+|+||.||+|... .+..||||+++.. .....+.+.+|+.++++++||||+++++++...+..++||||++
T Consensus 54 ~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 133 (325)
T 3kul_A 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYME 133 (325)
T ss_dssp EEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECCT
T ss_pred eeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCCC
Confidence 578999999999999974 3446999999754 33445679999999999999999999999999999999999999
Q ss_pred CCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccc
Q 047954 348 NGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV 427 (582)
Q Consensus 348 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~ 427 (582)
+|+|.+++.... ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 134 ~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~~-------ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 201 (325)
T 3kul_A 134 NGSLDTFLRTHD-----GQFTIMQLVGMLRGVGAGMRYLSDLG-------YVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201 (325)
T ss_dssp TCBHHHHHHTTT-----TCSCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred CCcHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHCC-------eeCCCCCcceEEECCCCCEEECCCCccccc
Confidence 999999997543 24889999999999999999999998 999999999999999999999999999876
Q ss_pred cCcc-------cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHHHHHHhhcccc
Q 047954 428 AQPI-------AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTA 499 (582)
Q Consensus 428 ~~~~-------~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (582)
.... ...+++.|+|||++.+..++.++|||||||++|||++ |+.||... ...++...+ ......
T Consensus 202 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~----~~~~~~~~~----~~~~~~ 273 (325)
T 3kul_A 202 EDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNM----TNRDVISSV----EEGYRL 273 (325)
T ss_dssp C----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTS----CHHHHHHHH----HTTCCC
T ss_pred ccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccC----CHHHHHHHH----HcCCCC
Confidence 4432 1223567999999988899999999999999999999 99999642 122222222 111111
Q ss_pred cccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccC
Q 047954 500 EIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVT 550 (582)
Q Consensus 500 ~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 550 (582)
.. . ......+.+++.+||..||++|||+.||++.|+.+...
T Consensus 274 ~~-~---------~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~ 314 (325)
T 3kul_A 274 PA-P---------MGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS 314 (325)
T ss_dssp CC-C---------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred CC-C---------CCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence 10 0 01123678899999999999999999999999988753
No 31
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=7.6e-43 Score=372.86 Aligned_cols=251 Identities=22% Similarity=0.399 Sum_probs=205.1
Q ss_pred ccccccccCceEEEEEEEcCCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCCh
Q 047954 272 PAEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNL 351 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 351 (582)
..+.||+|+||.||+|.+.++..||||+++... ...+.|.+|+.+|++++|||||++++++. .+..++||||+++|+|
T Consensus 192 ~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L 269 (454)
T 1qcf_A 192 LEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSL 269 (454)
T ss_dssp EEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBH
T ss_pred EEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcH
Confidence 357899999999999999888899999997643 45778999999999999999999999986 6678999999999999
Q ss_pred HHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccCcc
Q 047954 352 FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI 431 (582)
Q Consensus 352 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~~~ 431 (582)
.++++.... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 270 ~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~-------ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~ 338 (454)
T 1qcf_A 270 LDFLKSDEG----SKQPLPKLIDFSAQIAEGMAFIEQRN-------YIHRDLRAANILVSASLVCKIADFGLARVIEDNE 338 (454)
T ss_dssp HHHHHSHHH----HTCCHHHHHHHHHHHHHHHHHHHHTT-------CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH
T ss_pred HHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHhCC-------ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc
Confidence 999974321 24778899999999999999999998 9999999999999999999999999998765432
Q ss_pred -----cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHHHHHHhhcccccccchh
Q 047954 432 -----AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSE 505 (582)
Q Consensus 432 -----~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 505 (582)
...++..|+|||++....++.++|||||||++|||+| |+.||... ...++...+. .......
T Consensus 339 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~----~~~~~~~~i~----~~~~~~~---- 406 (454)
T 1qcf_A 339 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM----SNPEVIRALE----RGYRMPR---- 406 (454)
T ss_dssp HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC----CHHHHHHHHH----HTCCCCC----
T ss_pred eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCC----CHHHHHHHHH----cCCCCCC----
Confidence 2234578999999988899999999999999999999 99999642 2223332222 2211110
Q ss_pred hhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCCCC
Q 047954 506 ISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTEST 553 (582)
Q Consensus 506 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 553 (582)
+.....++.+++.+||+.||++|||+++|++.|+.+......
T Consensus 407 ------~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~~~ 448 (454)
T 1qcf_A 407 ------PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATES 448 (454)
T ss_dssp ------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSSCC
T ss_pred ------CCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcccc
Confidence 011123678899999999999999999999999998765443
No 32
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=3.2e-42 Score=348.63 Aligned_cols=272 Identities=27% Similarity=0.462 Sum_probs=212.3
Q ss_pred CCCChhHhhhccc-----------ccccccCceEEEEEEEcCCceEEEEEecCC----CcchHHHHHHHHHHHhcCCCCC
Q 047954 261 AGFKLNDLLKAPA-----------EGLGKGIFGNSYKALLEGRAPVVVKRLRDL----KPLITEEFRKQLLVIADQKHPN 325 (582)
Q Consensus 261 ~~~~~~~l~~~~~-----------~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~----~~~~~~~~~~e~~~l~~l~H~n 325 (582)
..|++.++..++. +.||+|+||.||+|.. ++..||||++... .....+.+.+|+.++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 4566666666542 5799999999999986 5678999998643 2334678999999999999999
Q ss_pred ccccceEEEeCCeeEEEEEeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCC
Q 047954 326 LLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKS 405 (582)
Q Consensus 326 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp 405 (582)
|+++++++...+..++||||+++|+|.+++..... ...+++..++.++.||+.||+|||+.+ |+||||||
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~-------i~H~dlkp 161 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG---TPPLSWHMRCKIAQGAANGINFLHENH-------HIHRDIKS 161 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGG---CCCCCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCCG
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccC---CCCCCHHHHHHHHHHHHHHHHHHhcCC-------eecCCCCH
Confidence 99999999999999999999999999999974322 235889999999999999999999998 99999999
Q ss_pred CCeeecCCCceEEeeccccccccCc------ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCC
Q 047954 406 TNILLDDNEMVLVSDYGFSSLVAQP------IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQG 479 (582)
Q Consensus 406 ~NILl~~~~~~kl~DfG~a~~~~~~------~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~ 479 (582)
+|||++.++.+||+|||+++..... ....++..|+|||.+.+ .++.++||||||+++|||++|+.||......
T Consensus 162 ~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~ 240 (307)
T 2nru_A 162 ANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP 240 (307)
T ss_dssp GGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSS
T ss_pred HHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcch
Confidence 9999999999999999998765432 12346789999998765 5899999999999999999999999754322
Q ss_pred CCccchHHHHHHHHhh-cccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhccc
Q 047954 480 INGADLCSWVLRAVRE-EWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKV 549 (582)
Q Consensus 480 ~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 549 (582)
. .+..+....... ....+.++..+ ..........+.+++.+||+.||++|||+.+|+++|+.+..
T Consensus 241 ~---~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 241 Q---LLLDIKEEIEDEEKTIEDYIDKKM--NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp S---BTTHHHHHHHTTSCCHHHHSCSSC--SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred H---HHHHHHHHhhhhhhhhhhhccccc--cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 1 122221111111 11112222221 11233455678899999999999999999999999998764
No 33
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=2.4e-43 Score=367.66 Aligned_cols=248 Identities=24% Similarity=0.408 Sum_probs=201.8
Q ss_pred ccccccccCceEEEEEEEc-CCceEEEEEecCCC-cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCC
Q 047954 272 PAEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK-PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNG 349 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 349 (582)
..+.||+|+||.||+|... ++..||||.++... ....+.|.+|+.++++++|||||++++++...+..++||||+++|
T Consensus 118 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g 197 (377)
T 3cbl_A 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 197 (377)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred EeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCC
Confidence 3578999999999999986 67889999987542 233457889999999999999999999999999999999999999
Q ss_pred ChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccC
Q 047954 350 NLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ 429 (582)
Q Consensus 350 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~ 429 (582)
+|.+++.... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 198 ~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~LH~~~-------ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~ 265 (377)
T 3cbl_A 198 DFLTFLRTEG-----ARLRVKTLLQMVGDAAAGMEYLESKC-------CIHRDLAARNCLVTEKNVLKISDFGMSREEAD 265 (377)
T ss_dssp BHHHHHHHHG-----GGCCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCSGGGEEECTTCCEEECCGGGCEECTT
T ss_pred CHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCC-------cCCcccCHHHEEEcCCCcEEECcCCCceecCC
Confidence 9999997532 24888999999999999999999998 99999999999999999999999999986543
Q ss_pred cc------cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHHHHHHhhccccccc
Q 047954 430 PI------AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAEIF 502 (582)
Q Consensus 430 ~~------~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (582)
.. ...++..|+|||.+.+..++.++|||||||++|||+| |+.||... ........+ .........
T Consensus 266 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~----~~~~~~~~~----~~~~~~~~~ 337 (377)
T 3cbl_A 266 GVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNL----SNQQTREFV----EKGGRLPCP 337 (377)
T ss_dssp SEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTS----CHHHHHHHH----HTTCCCCCC
T ss_pred CceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----CHHHHHHHH----HcCCCCCCC
Confidence 32 1123567999999988889999999999999999999 99998642 222222222 221111110
Q ss_pred chhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhccc
Q 047954 503 DSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKV 549 (582)
Q Consensus 503 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 549 (582)
.....++.+++.+||+.||++|||+.+|++.|+.++.
T Consensus 338 ----------~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 338 ----------ELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp ----------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----------CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 0112357889999999999999999999999998864
No 34
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.3e-42 Score=349.56 Aligned_cols=256 Identities=22% Similarity=0.379 Sum_probs=200.1
Q ss_pred cccccccCceEEEEEEE-----cCCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeC--CeeEEEEEe
Q 047954 273 AEGLGKGIFGNSYKALL-----EGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSN--DEKLLVYKF 345 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~~lv~e~ 345 (582)
.+.||+|+||.||+|++ .++..||||++........+.+.+|+.++++++||||+++++++... ...++||||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 94 (295)
T 3ugc_A 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY 94 (295)
T ss_dssp EEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEEC
T ss_pred hheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEe
Confidence 46799999999999985 35788999999876666667899999999999999999999998654 458999999
Q ss_pred CCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccc
Q 047954 346 AGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSS 425 (582)
Q Consensus 346 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~ 425 (582)
+++|+|.+++..... .+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 95 ~~~~~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~-------ivH~Dikp~Nil~~~~~~~kl~Dfg~~~ 162 (295)
T 3ugc_A 95 LPYGSLRDYLQKHKE-----RIDHIKLLQYTSQICKGMEYLGTKR-------YIHRDLATRNILVENENRVKIGDFGLTK 162 (295)
T ss_dssp CTTCBHHHHHHHCGG-----GCCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCSGGGEEEEETTEEEECCCCSCC
T ss_pred CCCCCHHHHHHhccc-----ccCHHHHHHHHHHHHHHHHHHhcCC-------cccCCCCHhhEEEcCCCeEEEccCcccc
Confidence 999999999976432 4889999999999999999999998 9999999999999999999999999998
Q ss_pred cccCcc-------cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC--------CCCccchHHHHH
Q 047954 426 LVAQPI-------AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQ--------GINGADLCSWVL 490 (582)
Q Consensus 426 ~~~~~~-------~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~--------~~~~~~~~~~~~ 490 (582)
...... ...++..|+|||.+.+..++.++||||||+++|||+||..|+..... ..........+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (295)
T 3ugc_A 163 VLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 242 (295)
T ss_dssp -------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHH
T ss_pred cccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHH
Confidence 764432 22345679999999988999999999999999999999999864211 000111111111
Q ss_pred HHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccC
Q 047954 491 RAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVT 550 (582)
Q Consensus 491 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 550 (582)
........... ......++.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 243 ~~~~~~~~~~~----------~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 243 ELLKNNGRLPR----------PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp HHHHTTCCCCC----------CTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHhccCcCCC----------CcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 11111111110 111223688899999999999999999999999988643
No 35
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.4e-42 Score=344.30 Aligned_cols=248 Identities=24% Similarity=0.419 Sum_probs=202.4
Q ss_pred cccccccCceEEEEEEEcCCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCChH
Q 047954 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLF 352 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 352 (582)
.+.||+|+||.||+|...++..||+|+++... ...+.+.+|+.++.+++||||+++++++......++||||+++++|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (268)
T 3sxs_A 13 LKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLL 91 (268)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred eeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHH
Confidence 46799999999999999988899999997543 34577999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccCcc-
Q 047954 353 NRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI- 431 (582)
Q Consensus 353 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~~~- 431 (582)
+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 92 ~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~-------i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 159 (268)
T 3sxs_A 92 NYLRSHG-----KGLEPSQLLEMCYDVCEGMAFLESHQ-------FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY 159 (268)
T ss_dssp HHHHHHG-----GGCCHHHHHHHHHHHHHHHHHHHHTT-------EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE
T ss_pred HHHHHcC-----CCCCHHHHHHHHHHHHHHHHHHHHCC-------eecCCcCcceEEECCCCCEEEccCccceecchhhh
Confidence 9997542 24889999999999999999999998 9999999999999999999999999998664432
Q ss_pred ----cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHHHHHHhhcccccccchhh
Q 047954 432 ----AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEI 506 (582)
Q Consensus 432 ----~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 506 (582)
...++..|+|||.+.+..++.++||||||+++|||+| |+.||.... .... .... ...... ..+.
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~----~~~~---~~~~-~~~~~~--~~~~- 228 (268)
T 3sxs_A 160 VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYT----NSEV---VLKV-SQGHRL--YRPH- 228 (268)
T ss_dssp EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSC----HHHH---HHHH-HTTCCC--CCCT-
T ss_pred hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccC----hHHH---HHHH-HcCCCC--CCCC-
Confidence 2234567999999988889999999999999999999 999996422 1111 1111 111110 0000
Q ss_pred hhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCC
Q 047954 507 SVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTE 551 (582)
Q Consensus 507 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 551 (582)
.....+.+++.+||+.||++|||+.|++++|+.++...
T Consensus 229 -------~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 229 -------LASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp -------TSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred -------cChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 01125788999999999999999999999999987643
No 36
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.8e-42 Score=354.63 Aligned_cols=243 Identities=20% Similarity=0.321 Sum_probs=193.4
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCCC-cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCC
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDLK-PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGN 350 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 350 (582)
.+.||+|+||+||+|.. .+++.||||++.... ....+.+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 15 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~ 94 (347)
T 3zgw_A 15 HETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGE 94 (347)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCB
T ss_pred EEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCCCCCC
Confidence 46799999999999996 568899999986543 2234568899999999999999999999999999999999999999
Q ss_pred hHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccCc
Q 047954 351 LFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP 430 (582)
Q Consensus 351 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~~ 430 (582)
|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||++......
T Consensus 95 L~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH~~g-------ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 161 (347)
T 3zgw_A 95 LFDYIISQD------RLSEEETRVVFRQIVSAVAYVHSQG-------YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGN 161 (347)
T ss_dssp HHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHTT-------CBCCCCCGGGEEECTTSCEEECCCTTCBC----
T ss_pred HHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------eEeCCccHHHEEEcCCCCEEEEeccCcccccCC
Confidence 999996532 4889999999999999999999998 999999999999999999999999998765432
Q ss_pred -----ccccccccccCCCCCCCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcc-cccccc
Q 047954 431 -----IAAQRMISYKSPEYQSSKKI-SRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEW-TAEIFD 503 (582)
Q Consensus 431 -----~~~~~~~~y~aPE~~~~~~~-~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d 503 (582)
....+++.|+|||++.+..+ +.++||||+||++|||++|+.||... ....+.. ....... .+..
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~----~~~~~~~---~i~~~~~~~p~~-- 232 (347)
T 3zgw_A 162 KDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDD----NVMALYK---KIMRGKYDVPKW-- 232 (347)
T ss_dssp ----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCS----SHHHHHH---HHHHTCCCCCTT--
T ss_pred CCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC----CHHHHHH---HHHcCCCCCCCC--
Confidence 23347889999999988775 89999999999999999999999642 1122222 2222111 0111
Q ss_pred hhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 504 SEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 504 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
...++.+++.+||+.||++|||++|+++|.|...
T Consensus 233 -----------~s~~~~~li~~~L~~dP~~Rps~~eil~hp~~~~ 266 (347)
T 3zgw_A 233 -----------LSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQ 266 (347)
T ss_dssp -----------CCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHT
T ss_pred -----------CCHHHHHHHHHHcccCHhHCcCHHHHhcCcchhc
Confidence 1124678999999999999999999999988654
No 37
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=2.2e-42 Score=345.62 Aligned_cols=248 Identities=23% Similarity=0.409 Sum_probs=200.9
Q ss_pred ccccccccCceEEEEEEEcCCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCCh
Q 047954 272 PAEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNL 351 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 351 (582)
..+.||+|+||.||+|...++..||+|+++... ...+.+.+|++++.+++||||+++++++......++||||+++|+|
T Consensus 28 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 106 (283)
T 3gen_A 28 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 106 (283)
T ss_dssp EEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBH
T ss_pred hHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcH
Confidence 357899999999999999988899999997543 3457799999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccCc-
Q 047954 352 FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP- 430 (582)
Q Consensus 352 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~~- 430 (582)
.+++.... ..+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 107 ~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~-------i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 174 (283)
T 3gen_A 107 LNYLREMR-----HRFQTQQLLEMCKDVCEAMEYLESKQ-------FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 174 (283)
T ss_dssp HHHHHCGG-----GCCCHHHHHHHHHHHHHHHHHHHHTT-------CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH
T ss_pred HHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHHCC-------ccCCCCccceEEEcCCCCEEEccccccccccccc
Confidence 99997532 24889999999999999999999998 999999999999999999999999999876443
Q ss_pred ----ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHHHHHHhhcccccccchh
Q 047954 431 ----IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSE 505 (582)
Q Consensus 431 ----~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 505 (582)
....+++.|+|||.+.+..++.++||||||+++|||+| |+.||.... .......+ ....... ...
T Consensus 175 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~----~~~~~~~~----~~~~~~~-~~~- 244 (283)
T 3gen_A 175 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT----NSETAEHI----AQGLRLY-RPH- 244 (283)
T ss_dssp HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSC----HHHHHHHH----HTTCCCC-CCT-
T ss_pred cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccC----hhHHHHHH----hcccCCC-CCC-
Confidence 22335577999999988899999999999999999999 999996422 11222111 1111100 000
Q ss_pred hhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccC
Q 047954 506 ISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVT 550 (582)
Q Consensus 506 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 550 (582)
.....+.+++.+||+.||++|||+.|++++|+.+...
T Consensus 245 --------~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 245 --------LASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp --------TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --------cCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 0112577899999999999999999999999988643
No 38
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=3.9e-42 Score=346.78 Aligned_cols=250 Identities=20% Similarity=0.305 Sum_probs=192.6
Q ss_pred cccccccCceEEEEEEEcCCceEEEEEecCCCcchHHHHHHHHHHHhc--CCCCCccccceEEEeC----CeeEEEEEeC
Q 047954 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIAD--QKHPNLLPLLAYYFSN----DEKLLVYKFA 346 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~~~~~~~----~~~~lv~e~~ 346 (582)
.+.||+|+||.||+|+. +++.||||++.. ...+.+..|.+++.. ++||||+++++++... ...++||||+
T Consensus 13 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~---~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~ 88 (301)
T 3q4u_A 13 LECVGKGRYGEVWRGSW-QGENVAVKIFSS---RDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYH 88 (301)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECG---GGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCC
T ss_pred EEeeccCCCcEEEEEEE-CCEEEEEEEecc---ccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhc
Confidence 46799999999999987 578899999854 234556667776665 8999999999997653 4578999999
Q ss_pred CCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHh--------ccCCCCCCCcceecCCCCCCeeecCCCceEE
Q 047954 347 GNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH--------HKDKSRTQSAVIHGNLKSTNILLDDNEMVLV 418 (582)
Q Consensus 347 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl 418 (582)
++|+|.++++.. .+++..++.++.||+.||+||| +.+ |+||||||+|||++.++.+||
T Consensus 89 ~~g~L~~~l~~~-------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-------ivH~Dlkp~Nill~~~~~~kl 154 (301)
T 3q4u_A 89 EMGSLYDYLQLT-------TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA-------IAHRDLKSKNILVKKNGQCCI 154 (301)
T ss_dssp TTCBHHHHHTTC-------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE-------EECSCCCGGGEEECTTSCEEE
T ss_pred cCCCHHHHHhhc-------ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC-------eecCCCChHhEEEcCCCCEEE
Confidence 999999999532 4889999999999999999999 665 999999999999999999999
Q ss_pred eeccccccccCcc--------cccccccccCCCCCCCC------CCCcchhHHHHHHHHHHHHhC----------CCCCC
Q 047954 419 SDYGFSSLVAQPI--------AAQRMISYKSPEYQSSK------KISRKSDVWSFGCLLLELLTG----------RISTH 474 (582)
Q Consensus 419 ~DfG~a~~~~~~~--------~~~~~~~y~aPE~~~~~------~~~~k~DVwS~Gvvl~elltG----------~~P~~ 474 (582)
+|||+++...... ...+|+.|+|||.+.+. .++.++|||||||++|||+|| +.||.
T Consensus 155 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~ 234 (301)
T 3q4u_A 155 ADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFY 234 (301)
T ss_dssp CCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred eeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccc
Confidence 9999997654332 12578899999998876 455799999999999999999 77876
Q ss_pred CCCCCCCccchHHHHHHHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhc
Q 047954 475 SAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547 (582)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 547 (582)
...... .....+.......... +.............++.+++.+||+.||++|||+.||++.|+.+
T Consensus 235 ~~~~~~---~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 235 DVVPND---PSFEDMRKVVCVDQQR----PNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TTSCSS---CCHHHHHHHHTTSCCC----CCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred ccCCCC---cchhhhhHHHhccCCC----CCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 543221 1112222222111111 11111112223455788999999999999999999999999875
No 39
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.7e-42 Score=359.45 Aligned_cols=259 Identities=23% Similarity=0.384 Sum_probs=207.3
Q ss_pred ccccccccCceEEEEEEEc--------CCceEEEEEecCCC-cchHHHHHHHHHHHhcC-CCCCccccceEEEeCCeeEE
Q 047954 272 PAEGLGKGIFGNSYKALLE--------GRAPVVVKRLRDLK-PLITEEFRKQLLVIADQ-KHPNLLPLLAYYFSNDEKLL 341 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 341 (582)
..+.||+|+||.||+|... .+..||||+++... ....+.+.+|+++++++ +|||||++++++...+..++
T Consensus 73 i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~l 152 (382)
T 3tt0_A 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV 152 (382)
T ss_dssp EEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred eeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEE
Confidence 4578999999999999863 23569999997543 33456789999999999 99999999999999999999
Q ss_pred EEEeCCCCChHHHHhcCCCC----------CCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeec
Q 047954 342 VYKFAGNGNLFNRIHGGKSS----------KNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLD 411 (582)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~ 411 (582)
||||+++|+|.+++...... .....+++..++.|+.||+.||+|||+.+ |+||||||+|||++
T Consensus 153 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-------ivH~Dlkp~NIll~ 225 (382)
T 3tt0_A 153 IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-------CIHRDLAARNVLVT 225 (382)
T ss_dssp EEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCCGGGEEEC
T ss_pred EEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC-------EecCCCCcceEEEc
Confidence 99999999999999865421 11235899999999999999999999998 99999999999999
Q ss_pred CCCceEEeeccccccccCc------ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccc
Q 047954 412 DNEMVLVSDYGFSSLVAQP------IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGAD 484 (582)
Q Consensus 412 ~~~~~kl~DfG~a~~~~~~------~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~ 484 (582)
.++.+||+|||+++..... ....+++.|+|||++.+..++.++|||||||++|||+| |+.||... ...+
T Consensus 226 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~----~~~~ 301 (382)
T 3tt0_A 226 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV----PVEE 301 (382)
T ss_dssp TTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC----CHHH
T ss_pred CCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC----CHHH
Confidence 9999999999999876432 22335678999999999999999999999999999999 99999642 1122
Q ss_pred hHHHHHHHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCCCCcc
Q 047954 485 LCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTESTEE 555 (582)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 555 (582)
+. ..+.......... ....++.+++.+||+.||++|||+.||+++|+.+......++
T Consensus 302 ~~----~~~~~~~~~~~~~----------~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~ 358 (382)
T 3tt0_A 302 LF----KLLKEGHRMDKPS----------NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQE 358 (382)
T ss_dssp HH----HHHHTTCCCCCCS----------SCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC
T ss_pred HH----HHHHcCCCCCCCc----------cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCC
Confidence 22 2222221111110 112257889999999999999999999999999986665444
No 40
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.4e-42 Score=374.36 Aligned_cols=251 Identities=29% Similarity=0.457 Sum_probs=206.4
Q ss_pred ccccccccCceEEEEEEEcC-CceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCC
Q 047954 272 PAEGLGKGIFGNSYKALLEG-RAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGN 350 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 350 (582)
..+.||+|+||.||+|.+.. +..||||.++... ...+.|.+|+.+|++++|||||+++++|......++||||+++|+
T Consensus 224 ~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~ 302 (495)
T 1opk_A 224 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 302 (495)
T ss_dssp EEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCB
T ss_pred eeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCC
Confidence 45789999999999999875 7789999997543 346789999999999999999999999999999999999999999
Q ss_pred hHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccCc
Q 047954 351 LFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP 430 (582)
Q Consensus 351 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~~ 430 (582)
|.+++..... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 303 L~~~l~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~-------ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 371 (495)
T 1opk_A 303 LLDYLRECNR----QEVSAVVLLYMATQISSAMEYLEKKN-------FIHRNLAARNCLVGENHLVKVADFGLSRLMTGD 371 (495)
T ss_dssp HHHHHHHSCT----TTSCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCSGGGEEECGGGCEEECCTTCEECCTTC
T ss_pred HHHHHHhcCc----CCCCHHHHHHHHHHHHHHHHHHHhCC-------cccCCCChhhEEECCCCcEEEeecccceeccCC
Confidence 9999976432 25889999999999999999999998 999999999999999999999999999876443
Q ss_pred c-----cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHHHHHHhhcccccccch
Q 047954 431 I-----AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDS 504 (582)
Q Consensus 431 ~-----~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 504 (582)
. ...+++.|+|||++.+..++.++|||||||++|||+| |+.||... ....+...+ .........
T Consensus 372 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~----~~~~~~~~~----~~~~~~~~~-- 441 (495)
T 1opk_A 372 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI----DLSQVYELL----EKDYRMERP-- 441 (495)
T ss_dssp CEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC----CGGGHHHHH----HTTCCCCCC--
T ss_pred ceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCC----CHHHHHHHH----HcCCCCCCC--
Confidence 2 2234568999999988889999999999999999999 99998643 222333322 222111110
Q ss_pred hhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCCC
Q 047954 505 EISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTES 552 (582)
Q Consensus 505 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 552 (582)
.....++.+|+.+||+.||++|||+.+|++.|+.+.....
T Consensus 442 --------~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~~~ 481 (495)
T 1opk_A 442 --------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 481 (495)
T ss_dssp --------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSSSC
T ss_pred --------CCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhccc
Confidence 1112367889999999999999999999999998875544
No 41
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.4e-42 Score=361.09 Aligned_cols=249 Identities=24% Similarity=0.407 Sum_probs=193.0
Q ss_pred ccccccccCceEEEEEEEc----CCceEEEEEecCC-CcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeC
Q 047954 272 PAEGLGKGIFGNSYKALLE----GRAPVVVKRLRDL-KPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFA 346 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 346 (582)
..+.||+|+||.||+|+.. ++..||||+++.. .....+.|.+|+.++++++||||+++++++...+..++||||+
T Consensus 49 ~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 128 (373)
T 2qol_A 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 128 (373)
T ss_dssp CCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred eeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCC
Confidence 3578999999999999865 5677999999754 3344568999999999999999999999999999999999999
Q ss_pred CCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccc
Q 047954 347 GNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSL 426 (582)
Q Consensus 347 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~ 426 (582)
++|+|.++++... ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 129 ~~~sL~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~-------ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 129 ENGSLDSFLRKHD-----AQFTVIQLVGMLRGIASGMKYLSDMG-------YVHRDLAARNILINSNLVCKVSDFGLGRV 196 (373)
T ss_dssp TTCBHHHHHHTTT-----TCSCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred CCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHHCC-------eeCCCCCcceEEEcCCCCEEECcCccccc
Confidence 9999999997543 24889999999999999999999998 99999999999999999999999999987
Q ss_pred ccCccc-------ccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHHHHHHhhccc
Q 047954 427 VAQPIA-------AQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWT 498 (582)
Q Consensus 427 ~~~~~~-------~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (582)
...... ..+++.|+|||++.+..++.++|||||||++|||++ |+.||... ...++.. .+.....
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~----~~~~~~~----~i~~~~~ 268 (373)
T 2qol_A 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM----SNQDVIK----AVDEGYR 268 (373)
T ss_dssp -----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTC----CHHHHHH----HHHTTEE
T ss_pred cccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCC----CHHHHHH----HHHcCCC
Confidence 654321 123467999999998899999999999999999998 99999643 1222222 2222211
Q ss_pred ccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccC
Q 047954 499 AEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVT 550 (582)
Q Consensus 499 ~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 550 (582)
... ......++.+++.+||+.||++||++.+|++.|+.+...
T Consensus 269 ~~~----------~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 269 LPP----------PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp CCC----------CTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCC----------CccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 110 011123688899999999999999999999999988643
No 42
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.7e-42 Score=347.40 Aligned_cols=247 Identities=25% Similarity=0.340 Sum_probs=200.5
Q ss_pred cccccccCceEEEEEEEcC-C-------ceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEE
Q 047954 273 AEGLGKGIFGNSYKALLEG-R-------APVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYK 344 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 344 (582)
.+.||+|+||.||+|.... + ..||+|.+........+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 92 (289)
T 4fvq_A 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQE 92 (289)
T ss_dssp EEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEEE
T ss_pred eeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEEE
Confidence 4679999999999998653 2 4699999976666677889999999999999999999999999999999999
Q ss_pred eCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCc--------e
Q 047954 345 FAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM--------V 416 (582)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~--------~ 416 (582)
|+++|+|.+++.... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++. +
T Consensus 93 ~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~~-------ivH~Dlkp~NIll~~~~~~~~~~~~~~ 160 (289)
T 4fvq_A 93 FVKFGSLDTYLKKNK-----NCINILWKLEVAKQLAAAMHFLEENT-------LIHGNVCAKNILLIREEDRKTGNPPFI 160 (289)
T ss_dssp CCTTCBHHHHHHHTG-----GGCCHHHHHHHHHHHHHHHHHHHHTT-------CCCCCCCGGGEEEEECCBGGGTBCCEE
T ss_pred CCCCCCHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHhhCC-------eECCCcCcceEEEecCCccccccccee
Confidence 999999999997643 24888999999999999999999998 999999999999998887 9
Q ss_pred EEeeccccccccCcccccccccccCCCCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhh
Q 047954 417 LVSDYGFSSLVAQPIAAQRMISYKSPEYQSS-KKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVRE 495 (582)
Q Consensus 417 kl~DfG~a~~~~~~~~~~~~~~y~aPE~~~~-~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 495 (582)
||+|||++..........++..|+|||.+.+ ..++.++|||||||++|||++|..|+.... . ...........
T Consensus 161 kl~Dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~---~---~~~~~~~~~~~ 234 (289)
T 4fvq_A 161 KLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL---D---SQRKLQFYEDR 234 (289)
T ss_dssp EECCCCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTS---C---HHHHHHHHHTT
T ss_pred eeccCcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCcccc---c---hHHHHHHhhcc
Confidence 9999999988766666667889999999887 678999999999999999999655543211 1 11111111111
Q ss_pred cccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccC
Q 047954 496 EWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVT 550 (582)
Q Consensus 496 ~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 550 (582)
....... ..++.+++.+||+.||++|||+.|++++|+.+...
T Consensus 235 ~~~~~~~-------------~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p 276 (289)
T 4fvq_A 235 HQLPAPK-------------AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276 (289)
T ss_dssp CCCCCCS-------------SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred CCCCCCC-------------CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence 1111111 11477899999999999999999999999988753
No 43
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=3.8e-42 Score=366.91 Aligned_cols=246 Identities=24% Similarity=0.414 Sum_probs=200.8
Q ss_pred cccccccCceEEEEEEEcCCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCC-eeEEEEEeCCCCCh
Q 047954 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSND-EKLLVYKFAGNGNL 351 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~-~~~lv~e~~~~gsL 351 (582)
.+.||+|+||.||+|.+. ++.||||+++... ..+.|.+|+.+|++++|||||++++++.... ..++||||+++|+|
T Consensus 198 ~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L 274 (450)
T 1k9a_A 198 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 274 (450)
T ss_dssp EEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBH
T ss_pred EeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcH
Confidence 468999999999999986 5689999997543 4578999999999999999999999988765 78999999999999
Q ss_pred HHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccCc-
Q 047954 352 FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP- 430 (582)
Q Consensus 352 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~~- 430 (582)
.+++..... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 275 ~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~-------ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 343 (450)
T 1k9a_A 275 VDYLRSRGR----SVLGGDCLLKFSLDVCEAMEYLEGNN-------FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 343 (450)
T ss_dssp HHHHHHHCT----TTCCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCCGGGEEECTTSCEEECCCTTCEECC---
T ss_pred HHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhCC-------eeCCCCCHhhEEECCCCCEEEeeCCCcccccccc
Confidence 999975432 24788899999999999999999998 999999999999999999999999999865432
Q ss_pred ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHHHHHHhhcccccccchhhhhh
Q 047954 431 IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509 (582)
Q Consensus 431 ~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 509 (582)
....++..|+|||.+.+..++.++|||||||++|||+| |+.||.... ..++...+. .+......
T Consensus 344 ~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~----~~~~~~~i~----~~~~~~~p------- 408 (450)
T 1k9a_A 344 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP----LKDVVPRVE----KGYKMDAP------- 408 (450)
T ss_dssp ---CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSC----TTTHHHHHH----TTCCCCCC-------
T ss_pred cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC----HHHHHHHHH----cCCCCCCC-------
Confidence 22345678999999999999999999999999999999 999996432 223333222 22111111
Q ss_pred hchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccC
Q 047954 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVT 550 (582)
Q Consensus 510 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 550 (582)
.....++.+++.+||+.||++|||+.++++.|+.+...
T Consensus 409 ---~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 409 ---DGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp ---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ---CcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 11123678899999999999999999999999988754
No 44
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.7e-42 Score=353.49 Aligned_cols=248 Identities=19% Similarity=0.320 Sum_probs=196.4
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCC-cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK-PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGN 350 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 350 (582)
.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++||||+++|+
T Consensus 12 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~ 91 (323)
T 3tki_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91 (323)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEE
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCc
Confidence 467999999999999976 67889999986433 2234678899999999999999999999999999999999999999
Q ss_pred hHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccCc
Q 047954 351 LFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP 430 (582)
Q Consensus 351 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~~ 430 (582)
|.+++... ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.+...
T Consensus 92 L~~~l~~~------~~~~~~~~~~i~~qi~~aL~~LH~~g-------ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 158 (323)
T 3tki_A 92 LFDRIEPD------IGMPEPDAQRFFHQLMAGVVYLHGIG-------ITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (323)
T ss_dssp GGGGSBTT------TBCCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred HHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHHCC-------ccccccchHHEEEeCCCCEEEEEeeccceeccC
Confidence 99998643 24889999999999999999999998 999999999999999999999999999765322
Q ss_pred ------ccccccccccCCCCCCCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccc
Q 047954 431 ------IAAQRMISYKSPEYQSSKKI-SRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFD 503 (582)
Q Consensus 431 ------~~~~~~~~y~aPE~~~~~~~-~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 503 (582)
....+++.|+|||++.+..+ +.++|||||||++|||++|+.||...... ......+. ..... ..
T Consensus 159 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~~~~----~~~~~---~~ 229 (323)
T 3tki_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS--CQEYSDWK----EKKTY---LN 229 (323)
T ss_dssp TEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTT--SHHHHHHH----TTCTT---ST
T ss_pred CcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchH--HHHHHHHh----ccccc---CC
Confidence 23457889999999887665 78999999999999999999999653221 11111111 11100 00
Q ss_pred hhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhccc
Q 047954 504 SEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKV 549 (582)
Q Consensus 504 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 549 (582)
+ .......+.+++.+||+.||++|||+.|++++.|....
T Consensus 230 ~-------~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~ 268 (323)
T 3tki_A 230 P-------WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP 268 (323)
T ss_dssp T-------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred c-------cccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhccc
Confidence 0 00112256789999999999999999999999886543
No 45
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=7.8e-42 Score=353.40 Aligned_cols=247 Identities=19% Similarity=0.302 Sum_probs=200.5
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCCc------chHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEe
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKP------LITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKF 345 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 345 (582)
.+.||+|+||.||+|... ++..||+|.++.... ...+.+.+|+.++.+++||||+++++++.+....++||||
T Consensus 17 ~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~ 96 (361)
T 2yab_A 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILEL 96 (361)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred eeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEc
Confidence 467999999999999975 578899999865322 2357899999999999999999999999999999999999
Q ss_pred CCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCC----ceEEeec
Q 047954 346 AGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNE----MVLVSDY 421 (582)
Q Consensus 346 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~----~~kl~Df 421 (582)
+++|+|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++ .+||+||
T Consensus 97 ~~gg~L~~~l~~~------~~l~~~~~~~i~~qi~~aL~~LH~~g-------ivHrDlkp~NIll~~~~~~~~~vkl~DF 163 (361)
T 2yab_A 97 VSGGELFDFLAQK------ESLSEEEATSFIKQILDGVNYLHTKK-------IAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (361)
T ss_dssp CCSCBHHHHHTTC------SCCBHHHHHHHHHHHHHHHHHHHHTT-------EECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred CCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCC-------cccCCCCHHHEEEeCCCCCccCEEEEec
Confidence 9999999999643 25899999999999999999999998 99999999999998877 7999999
Q ss_pred cccccccCc---ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhccc
Q 047954 422 GFSSLVAQP---IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWT 498 (582)
Q Consensus 422 G~a~~~~~~---~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (582)
|+++..... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.... ..++...+ ....+
T Consensus 164 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~----~~~~~~~i---~~~~~- 235 (361)
T 2yab_A 164 GLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT----KQETLANI---TAVSY- 235 (361)
T ss_dssp SSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS----HHHHHHHH---HTTCC-
T ss_pred CCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHH---HhcCC-
Confidence 999876543 23457889999999999899999999999999999999999996421 12222111 11111
Q ss_pred ccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhc
Q 047954 499 AEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547 (582)
Q Consensus 499 ~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 547 (582)
-+++... ......+.+++.+||..||++|||+.|+++|.|..
T Consensus 236 --~~~~~~~-----~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~ 277 (361)
T 2yab_A 236 --DFDEEFF-----SQTSELAKDFIRKLLVKETRKRLTIQEALRHPWIT 277 (361)
T ss_dssp --CCCHHHH-----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTS
T ss_pred --CCCchhc-----cCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcC
Confidence 0111100 01123577899999999999999999999988754
No 46
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-42 Score=360.45 Aligned_cols=254 Identities=22% Similarity=0.374 Sum_probs=201.7
Q ss_pred cccccccCceEEEEEEEc------CCceEEEEEecCC-CcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEe
Q 047954 273 AEGLGKGIFGNSYKALLE------GRAPVVVKRLRDL-KPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKF 345 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 345 (582)
.+.||+|+||.||+|.+. ++..||||+++.. .......+.+|+.++++++|||||++++++......++||||
T Consensus 76 ~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 155 (367)
T 3l9p_A 76 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLEL 155 (367)
T ss_dssp EEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEe
Confidence 467999999999999854 3567999999654 334456788999999999999999999999999999999999
Q ss_pred CCCCChHHHHhcCCCCC-CCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCC---ceEEeec
Q 047954 346 AGNGNLFNRIHGGKSSK-NRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNE---MVLVSDY 421 (582)
Q Consensus 346 ~~~gsL~~~l~~~~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~---~~kl~Df 421 (582)
+++|+|.+++....... ....+++..++.++.||+.||+|||+++ |+||||||+|||++.++ .+||+||
T Consensus 156 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-------ivHrDlkp~NIll~~~~~~~~~kL~DF 228 (367)
T 3l9p_A 156 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH-------FIHRDIAARNCLLTCPGPGRVAKIGDF 228 (367)
T ss_dssp CTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCCGGGEEESCSSTTCCEEECCC
T ss_pred CCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC-------eeCCCCChhhEEEecCCCCceEEECCC
Confidence 99999999997644221 1235889999999999999999999998 99999999999999554 5999999
Q ss_pred cccccccC------cccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHHHHHHh
Q 047954 422 GFSSLVAQ------PIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVR 494 (582)
Q Consensus 422 G~a~~~~~------~~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~ 494 (582)
|+++.+.. .....+++.|+|||.+.+..++.++|||||||++|||+| |+.||... ...++...+ .
T Consensus 229 G~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~----~~~~~~~~i----~ 300 (367)
T 3l9p_A 229 GMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK----SNQEVLEFV----T 300 (367)
T ss_dssp HHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC----CHHHHHHHH----H
T ss_pred ccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC----CHHHHHHHH----H
Confidence 99975422 223345778999999988899999999999999999998 99999642 222222222 1
Q ss_pred hcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCC
Q 047954 495 EEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTE 551 (582)
Q Consensus 495 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 551 (582)
........ ......+.+++.+||+.||++|||+.+|+++|+.+....
T Consensus 301 ~~~~~~~~----------~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 301 SGGRMDPP----------KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp TTCCCCCC----------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred cCCCCCCC----------ccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 11111110 011225788999999999999999999999999887543
No 47
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=6.8e-42 Score=347.21 Aligned_cols=258 Identities=19% Similarity=0.297 Sum_probs=198.8
Q ss_pred cccccccCceEEEEEEEcCCceEEEEEecCCC--cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCC
Q 047954 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLK--PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGN 350 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 350 (582)
.+.||+|+||+||+|...+++.||+|++.... ....+.+.+|+.++++++||||+++++++.+....++||||++ |+
T Consensus 26 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~ 104 (311)
T 3niz_A 26 LEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFME-KD 104 (311)
T ss_dssp EEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCS-EE
T ss_pred hhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCC-CC
Confidence 36799999999999999889999999986432 2335678899999999999999999999999999999999997 58
Q ss_pred hHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccCc
Q 047954 351 LFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP 430 (582)
Q Consensus 351 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~~ 430 (582)
|.+.+.... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 105 l~~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~LH~~~-------ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 172 (311)
T 3niz_A 105 LKKVLDENK-----TGLQDSQIKIYLYQLLRGVAHCHQHR-------ILHRDLKPQNLLINSDGALKLADFGLARAFGIP 172 (311)
T ss_dssp HHHHHHTCT-----TCCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCCGGGEEECTTCCEEECCCTTCEETTSC
T ss_pred HHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC-------cccCCCchHhEEECCCCCEEEccCcCceecCCC
Confidence 888887543 24889999999999999999999998 999999999999999999999999999876432
Q ss_pred ----ccccccccccCCCCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhccccccc---
Q 047954 431 ----IAAQRMISYKSPEYQSS-KKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIF--- 502 (582)
Q Consensus 431 ----~~~~~~~~y~aPE~~~~-~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 502 (582)
....++..|+|||++.+ ..++.++|||||||++|||++|+.||..... .+....+.............
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~~~~i~~~~~~~~~~~~~~~~ 248 (311)
T 3niz_A 173 VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTD----DDQLPKIFSILGTPNPREWPQVQ 248 (311)
T ss_dssp CC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSST----TTHHHHHHHHHCCCCTTTSGGGT
T ss_pred cccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHHHHHCCCChHHhhhhh
Confidence 22346788999998876 5689999999999999999999999975432 22233332222211110000
Q ss_pred chh------------hhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhc
Q 047954 503 DSE------------ISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547 (582)
Q Consensus 503 d~~------------~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 547 (582)
+.. ............++.+++.+||+.||++|||++|+++|.+.-
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~ 305 (311)
T 3niz_A 249 ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFK 305 (311)
T ss_dssp TSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGT
T ss_pred ccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccc
Confidence 000 000000011123678899999999999999999999987643
No 48
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-41 Score=346.88 Aligned_cols=266 Identities=17% Similarity=0.243 Sum_probs=204.6
Q ss_pred cccccccCceEEEEEEEcC-CceEEEEEecCCC-cchHHHHHHHHHHHhcCCCCCccccceEEEeCC--eeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALLEG-RAPVVVKRLRDLK-PLITEEFRKQLLVIADQKHPNLLPLLAYYFSND--EKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~--~~~lv~e~~~~ 348 (582)
.+.||+|+||.||+|.... ++.||||++.... ....+.+.+|++++++++||||+++++++.... ..++||||+++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~ 93 (319)
T 4euu_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPC 93 (319)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTT
T ss_pred EEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCC
Confidence 4679999999999999764 7889999997433 234577889999999999999999999998765 67999999999
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeee----cCCCceEEeecccc
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILL----DDNEMVLVSDYGFS 424 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl----~~~~~~kl~DfG~a 424 (582)
|+|.+++...... ..+++..++.++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||++
T Consensus 94 ~~L~~~l~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~-------ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a 163 (319)
T 4euu_A 94 GSLYTVLEEPSNA---YGLPESEFLIVLRDVVGGMNHLRENG-------IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (319)
T ss_dssp CBHHHHHHSGGGT---TCCCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred CCHHHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHHHCC-------EecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence 9999999754321 23889999999999999999999998 9999999999999 78888999999999
Q ss_pred ccccCcc---cccccccccCCCCCC--------CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHH
Q 047954 425 SLVAQPI---AAQRMISYKSPEYQS--------SKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493 (582)
Q Consensus 425 ~~~~~~~---~~~~~~~y~aPE~~~--------~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 493 (582)
+...... ...++..|+|||++. +..++.++|||||||++|||+||+.||...........+...+....
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 243 (319)
T 4euu_A 164 RELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK 243 (319)
T ss_dssp EECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHC
T ss_pred eecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCC
Confidence 8765432 334788999999875 56789999999999999999999999975432222222222222221
Q ss_pred hhcccccccc---------hhhhh-hhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 494 REEWTAEIFD---------SEISV-QRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 494 ~~~~~~~~~d---------~~~~~-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
.......+.. ..+.. ..........+.+++.+||+.||++|||++|++++..+..
T Consensus 244 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred CcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 1111111000 00000 0112344556888999999999999999999999998654
No 49
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.1e-41 Score=348.52 Aligned_cols=254 Identities=13% Similarity=0.135 Sum_probs=201.8
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCCCcchHHHHHHHHHHHhcC-CCCCccccceEEEeCCeeEEEEEeCCCCC
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDLKPLITEEFRKQLLVIADQ-KHPNLLPLLAYYFSNDEKLLVYKFAGNGN 350 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~gs 350 (582)
.+.||+|+||.||+|.. .+++.||||.+..... .+.+.+|+.+++++ +||||+++++++...+..++||||+ +++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~ 90 (330)
T 2izr_A 14 GKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPS 90 (330)
T ss_dssp EEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCC
Confidence 46799999999999996 5778899999864332 34588999999999 9999999999999999999999999 999
Q ss_pred hHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCc-----eEEeeccccc
Q 047954 351 LFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM-----VLVSDYGFSS 425 (582)
Q Consensus 351 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~-----~kl~DfG~a~ 425 (582)
|.+++.... ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.++. +||+|||+++
T Consensus 91 L~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~-------iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~ 158 (330)
T 2izr_A 91 LEDLFDLCD-----RTFSLKTVLMIAIQLISRMEYVHSKN-------LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158 (330)
T ss_dssp HHHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCCGGGEEECCGGGTCTTSEEECCCTTCE
T ss_pred HHHHHHHcC-----CCCCHHHHHHHHHHHHHHHHHHHhCC-------eeccCCCHHHeeeccCCCCCCceEEEEEcccce
Confidence 999997542 25899999999999999999999998 999999999999998887 9999999998
Q ss_pred cccCc-----------ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHh
Q 047954 426 LVAQP-----------IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVR 494 (582)
Q Consensus 426 ~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 494 (582)
.+... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||..... .+..........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~----~~~~~~~~~i~~ 234 (330)
T 2izr_A 159 EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKA----DTLKERYQKIGD 234 (330)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC----SSHHHHHHHHHH
T ss_pred eeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccc----ccHHHHHHHHHh
Confidence 75432 234578899999999999999999999999999999999999975421 222222221111
Q ss_pred hcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCCCC
Q 047954 495 EEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTEST 553 (582)
Q Consensus 495 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 553 (582)
..... .... ...... ++.+++..||+.||.+||++.+|++.|+.+......
T Consensus 235 ~~~~~---~~~~----~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~ 285 (330)
T 2izr_A 235 TKRAT---PIEV----LCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGY 285 (330)
T ss_dssp HHHHS---CHHH----HTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred hhccC---CHHH----HhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 11000 0000 000011 688899999999999999999999999988655443
No 50
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=4.5e-42 Score=357.19 Aligned_cols=248 Identities=21% Similarity=0.278 Sum_probs=197.2
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCCh
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNL 351 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 351 (582)
.+.||+|+||.||+|... ++..||+|+++.......+.+.+|+.++++++||||+++++++...+..++||||+++|+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 357999999999999864 6788999999876555677899999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeee--cCCCceEEeeccccccccC
Q 047954 352 FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILL--DDNEMVLVSDYGFSSLVAQ 429 (582)
Q Consensus 352 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl--~~~~~~kl~DfG~a~~~~~ 429 (582)
.+++.... ..+++..++.++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++.+..
T Consensus 174 ~~~l~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~-------ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~ 241 (373)
T 2x4f_A 174 FDRIIDES-----YNLTELDTILFMKQICEGIRHMHQMY-------ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKP 241 (373)
T ss_dssp HHHHHHTG-----GGCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCCGGGEEEEETTTTEEEECCCSSCEECCT
T ss_pred HHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCC-------cccccCCHHHEEEecCCCCcEEEEeCCCceecCC
Confidence 99887542 24889999999999999999999998 9999999999999 5678899999999987654
Q ss_pred cc---cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccchhh
Q 047954 430 PI---AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEI 506 (582)
Q Consensus 430 ~~---~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 506 (582)
.. ...+++.|+|||++.+..++.++|||||||++|||++|+.||.... .. ..........+.. .....
T Consensus 242 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~----~~---~~~~~i~~~~~~~--~~~~~ 312 (373)
T 2x4f_A 242 REKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN----DA---ETLNNILACRWDL--EDEEF 312 (373)
T ss_dssp TCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSS----HH---HHHHHHHHTCCCS--CSGGG
T ss_pred ccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC----HH---HHHHHHHhccCCC--Chhhh
Confidence 32 2347889999999998899999999999999999999999996432 11 2222222222110 01000
Q ss_pred hhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhc
Q 047954 507 SVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547 (582)
Q Consensus 507 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 547 (582)
.....++.+++.+||+.||++|||+.|+++|.+..
T Consensus 313 ------~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~ 347 (373)
T 2x4f_A 313 ------QDISEEAKEFISKLLIKEKSWRISASEALKHPWLS 347 (373)
T ss_dssp ------TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred ------ccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcC
Confidence 01123578899999999999999999999987743
No 51
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2e-41 Score=347.14 Aligned_cols=242 Identities=22% Similarity=0.326 Sum_probs=198.3
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCC---CcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDL---KPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 348 (582)
.+.||+|+||+||+|+.. +++.||+|+++.. .....+.+.+|+.++++++||||+++++++.+.+..++||||+++
T Consensus 10 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~g 89 (337)
T 1o6l_A 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANG 89 (337)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 467999999999999975 5788999998642 223456788999999999999999999999999999999999999
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccccc
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~ 428 (582)
|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 90 g~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~-------ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 156 (337)
T 1o6l_A 90 GELFFHLSRER------VFTEERARFYGAEIVSALEYLHSRD-------VVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156 (337)
T ss_dssp CBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT-------CBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred CcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------eecCcCCHHHEEECCCCCEEEeeccchhhcc
Confidence 99999987532 4888999999999999999999998 9999999999999999999999999998643
Q ss_pred Cc----ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccch
Q 047954 429 QP----IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDS 504 (582)
Q Consensus 429 ~~----~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 504 (582)
.. ....+|+.|+|||++.+..++.++|||||||++|||++|+.||... +...+...+ ..... .. ..
T Consensus 157 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~----~~~~~~~~i---~~~~~--~~-p~ 226 (337)
T 1o6l_A 157 SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ----DHERLFELI---LMEEI--RF-PR 226 (337)
T ss_dssp CTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCS----SHHHHHHHH---HHCCC--CC-CT
T ss_pred cCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCC----CHHHHHHHH---HcCCC--CC-CC
Confidence 22 2345788999999999999999999999999999999999999642 112222211 11110 00 00
Q ss_pred hhhhhhchHHHHHHHHHHHHHcccCCCCCCC-----ChHHHHHHHhh
Q 047954 505 EISVQRSAAHGMLKLLQVAIQCCNKSPEKRP-----EMAEVVSELEI 546 (582)
Q Consensus 505 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~~ 546 (582)
....++.+++.+||+.||++|| +++||++|.+.
T Consensus 227 ---------~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f 264 (337)
T 1o6l_A 227 ---------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264 (337)
T ss_dssp ---------TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGG
T ss_pred ---------CCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCc
Confidence 1112577899999999999999 99999999764
No 52
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=8.6e-42 Score=345.82 Aligned_cols=252 Identities=25% Similarity=0.466 Sum_probs=195.8
Q ss_pred ccccccccCceEEEEEEEcCCceEEEEEecCCC--cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCC
Q 047954 272 PAEGLGKGIFGNSYKALLEGRAPVVVKRLRDLK--PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNG 349 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 349 (582)
..+.||+|+||.||+|...+ .+|+|.++... ....+.+.+|+.++++++||||+++++++. .+..++||||+.+|
T Consensus 40 ~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~ 116 (307)
T 3lb7_A 40 LSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGS 116 (307)
T ss_dssp EEEEEEECSSCEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSC
T ss_pred EEeEecCCCCeEEEEEEECC--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEecCCCC
Confidence 35789999999999998654 58888886533 334567899999999999999999999864 55689999999999
Q ss_pred ChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccC
Q 047954 350 NLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ 429 (582)
Q Consensus 350 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~ 429 (582)
+|.+++.... ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 117 ~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~~-------ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~ 184 (307)
T 3lb7_A 117 SLYKHLHVQE-----TKFQMFQLIDIARQTAQGMDYLHAKN-------IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp BHHHHHHTSC-----CCCCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCCSSSEEECTTSCEEECCCCSSCC---
T ss_pred cHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHhCC-------EeeCCCChhhEEEcCCCCEEEccCCCceeccc
Confidence 9999997443 24889999999999999999999998 99999999999999999999999999976542
Q ss_pred c------ccccccccccCCCCCC---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhccccc
Q 047954 430 P------IAAQRMISYKSPEYQS---SKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAE 500 (582)
Q Consensus 430 ~------~~~~~~~~y~aPE~~~---~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (582)
. ....+++.|+|||.+. +..++.++|||||||++|||+||+.||.... ....+ ...........
T Consensus 185 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~---~~~~~----~~~~~~~~~~~ 257 (307)
T 3lb7_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN---NRDQI----IFMVGRGYASP 257 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC---CHHHH----HHHHHHTCCCC
T ss_pred ccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCC---cHHHH----HHHHhcCCCCc
Confidence 1 2335788999999875 6678999999999999999999999996432 11111 12222211111
Q ss_pred ccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCC
Q 047954 501 IFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTE 551 (582)
Q Consensus 501 ~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 551 (582)
.... ........+.+++.+||+.||++||++.||+++|+.+....
T Consensus 258 ~~~~------~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 258 DLSK------LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp CSTT------SCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred chhh------hhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 0000 00011236788999999999999999999999999887543
No 53
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=7.4e-42 Score=354.81 Aligned_cols=263 Identities=17% Similarity=0.221 Sum_probs=199.5
Q ss_pred cccccccCceEEEEEEEcC------CceEEEEEecCCCcchH-----------HHHHHHHHHHhcCCCCCccccceEEEe
Q 047954 273 AEGLGKGIFGNSYKALLEG------RAPVVVKRLRDLKPLIT-----------EEFRKQLLVIADQKHPNLLPLLAYYFS 335 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~-----------~~~~~e~~~l~~l~H~niv~l~~~~~~ 335 (582)
.+.||+|+||.||+|.... +..||||++........ ..+..|+..+.+++||||+++++++..
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~ 119 (364)
T 3op5_A 40 GLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLH 119 (364)
T ss_dssp EEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEE
T ss_pred EEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeee
Confidence 4679999999999999765 36899999865432111 123455667788899999999999987
Q ss_pred C----CeeEEEEEeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeec
Q 047954 336 N----DEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLD 411 (582)
Q Consensus 336 ~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~ 411 (582)
. ...++||||+ +++|.+++.... ..+++..++.|+.||+.||+|||+.+ |+||||||+|||++
T Consensus 120 ~~~~~~~~~lv~e~~-g~~L~~~~~~~~-----~~l~~~~~~~i~~qi~~~l~~lH~~~-------iiHrDlkp~Nill~ 186 (364)
T 3op5_A 120 DKNGKSYRFMIMDRF-GSDLQKIYEANA-----KRFSRKTVLQLSLRILDILEYIHEHE-------YVHGDIKASNLLLN 186 (364)
T ss_dssp EETTEEEEEEEEECE-EEEHHHHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCCGGGEEEE
T ss_pred ccCCcceEEEEEeCC-CCCHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC-------eEEecCCHHHEEEe
Confidence 5 4579999999 999999997642 25899999999999999999999998 99999999999999
Q ss_pred --CCCceEEeeccccccccCcc-----------cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC
Q 047954 412 --DNEMVLVSDYGFSSLVAQPI-----------AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQ 478 (582)
Q Consensus 412 --~~~~~kl~DfG~a~~~~~~~-----------~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~ 478 (582)
.++.+||+|||+++.+.... ...+|+.|+|||++.+..++.++|||||||++|||+||+.||....
T Consensus 187 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~- 265 (364)
T 3op5_A 187 YKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNL- 265 (364)
T ss_dssp SSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT-
T ss_pred cCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccc-
Confidence 88999999999997764321 2237889999999999999999999999999999999999997422
Q ss_pred CCCccchHHHHHHHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCCCCccc
Q 047954 479 GINGADLCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTESTEEE 556 (582)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~ 556 (582)
................ ..+++++.+.. .....++.+++..||+.||++||++.+|++.|+.+........+
T Consensus 266 --~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~~~ 336 (364)
T 3op5_A 266 --KDPKYVRDSKIRYREN-IASLMDKCFPA----ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDD 336 (364)
T ss_dssp --TCHHHHHHHHHHHHHC-HHHHHHHHSCT----TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCC
T ss_pred --cCHHHHHHHHHHhhhh-HHHHHHHhccc----ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCcC
Confidence 1122222222221111 11222211100 11123688899999999999999999999999988765554443
No 54
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=4.4e-42 Score=350.32 Aligned_cols=253 Identities=23% Similarity=0.395 Sum_probs=191.1
Q ss_pred cccccccCceEEEEEEEcCCc----eEEEEEecCC--CcchHHHHHHHHHHHhcCCCCCccccceEEEeCCee------E
Q 047954 273 AEGLGKGIFGNSYKALLEGRA----PVVVKRLRDL--KPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEK------L 340 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~~~----~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~------~ 340 (582)
.+.||+|+||.||+|...... .||||+++.. .....+.+.+|+.++++++||||+++++++...... +
T Consensus 28 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 107 (323)
T 3qup_A 28 GRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPM 107 (323)
T ss_dssp EEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CEE
T ss_pred eceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCccE
Confidence 468999999999999865432 7999998653 334567899999999999999999999999887655 9
Q ss_pred EEEEeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEee
Q 047954 341 LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSD 420 (582)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~D 420 (582)
+||||+.+|+|.+++...........+++..++.++.||+.||+|||+.+ |+||||||+|||+++++.+||+|
T Consensus 108 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-------ivH~Dikp~NIli~~~~~~kl~D 180 (323)
T 3qup_A 108 VILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN-------FIHRDLAARNCMLAEDMTVCVAD 180 (323)
T ss_dssp EEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCSGGGEEECTTSCEEECC
T ss_pred EEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC-------cccCCCCcceEEEcCCCCEEEee
Confidence 99999999999999975443333345889999999999999999999998 99999999999999999999999
Q ss_pred ccccccccCcc------cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHHHHHH
Q 047954 421 YGFSSLVAQPI------AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAV 493 (582)
Q Consensus 421 fG~a~~~~~~~------~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~ 493 (582)
||+++...... ...+++.|+|||.+.+..++.++|||||||++|||++ |+.||.... ...+...+..
T Consensus 181 fg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~----~~~~~~~~~~-- 254 (323)
T 3qup_A 181 FGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIE----NAEIYNYLIG-- 254 (323)
T ss_dssp CCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC----GGGHHHHHHT--
T ss_pred ccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccC----hHHHHHHHhc--
Confidence 99998764332 2334567999999998899999999999999999999 999996432 2222222211
Q ss_pred hhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccC
Q 047954 494 REEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVT 550 (582)
Q Consensus 494 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 550 (582)
.. .... . .....++.+++.+||+.||++|||+.++++.|+.+...
T Consensus 255 -~~-~~~~-~---------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~ 299 (323)
T 3qup_A 255 -GN-RLKQ-P---------PECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH 299 (323)
T ss_dssp -TC-CCCC-C---------TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -CC-CCCC-C---------CccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 11 1100 0 11123578899999999999999999999999988753
No 55
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=4.5e-42 Score=351.10 Aligned_cols=246 Identities=22% Similarity=0.416 Sum_probs=193.9
Q ss_pred cccccccCceEEEEEEEc-CCc----eEEEEEecCC-CcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRA----PVVVKRLRDL-KPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFA 346 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 346 (582)
.+.||+|+||+||+|... ++. .||+|.++.. .....+.+.+|+.++++++||||++++++|.... .++|+||+
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v~e~~ 98 (327)
T 3poz_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLM 98 (327)
T ss_dssp EEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEEEEECC
T ss_pred ceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEEEEec
Confidence 467999999999999964 333 3688887543 2345678999999999999999999999998754 78999999
Q ss_pred CCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccc
Q 047954 347 GNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSL 426 (582)
Q Consensus 347 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~ 426 (582)
.+|+|.+++..... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 99 ~~g~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~~-------ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 99 PFGCLLDYVREHKD-----NIGSQYLLNWCVQIAKGMNYLEDRR-------LVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp TTCBHHHHHHHSTT-----SCCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred CCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHhhCC-------eeCCCCChheEEECCCCCEEEccCcceeE
Confidence 99999999976432 4889999999999999999999998 99999999999999999999999999987
Q ss_pred ccCcc------cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHHHHHHhhcccc
Q 047954 427 VAQPI------AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTA 499 (582)
Q Consensus 427 ~~~~~------~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (582)
..... ...++..|+|||++.+..++.++|||||||++|||+| |+.||.... ...+...+.. ....
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~----~~~~~~~~~~----~~~~ 238 (327)
T 3poz_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP----ASEISSILEK----GERL 238 (327)
T ss_dssp HTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC----GGGHHHHHHT----TCCC
T ss_pred ccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCC----HHHHHHHHHc----CCCC
Confidence 64332 2234668999999999999999999999999999999 999996432 2222222211 1110
Q ss_pred cccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhccc
Q 047954 500 EIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKV 549 (582)
Q Consensus 500 ~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 549 (582)
.. .......+.+++.+||+.||++|||+.|++++|+.+..
T Consensus 239 ~~----------~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 239 PQ----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp CC----------CTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred CC----------CccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 00 01112257889999999999999999999999998764
No 56
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.1e-41 Score=350.89 Aligned_cols=248 Identities=21% Similarity=0.330 Sum_probs=201.6
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCCCc---chHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDLKP---LITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 348 (582)
.+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|++++++++||||+++++++...+..++||||+.
T Consensus 59 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~- 137 (348)
T 1u5q_A 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL- 137 (348)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred eeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCC-
Confidence 46799999999999996 5788899999865432 234578899999999999999999999999999999999997
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccccc
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~ 428 (582)
|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 138 g~l~~~l~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~-------ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 205 (348)
T 1u5q_A 138 GSASDLLEVHK-----KPLQEVEIAAVTHGALQGLAYLHSHN-------MIHRDVKAGNILLSEPGLVKLGDFGSASIMA 205 (348)
T ss_dssp EEHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHHTT-------CBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred CCHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC-------eeeCCCCHHHEEECCCCCEEEeeccCceecC
Confidence 68888886432 25889999999999999999999998 9999999999999999999999999998887
Q ss_pred CcccccccccccCCCCCC---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccchh
Q 047954 429 QPIAAQRMISYKSPEYQS---SKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSE 505 (582)
Q Consensus 429 ~~~~~~~~~~y~aPE~~~---~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 505 (582)
......+++.|+|||++. ...++.++|||||||++|||+||+.||.... ....+....... ........
T Consensus 206 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~-------~~~~~~~~~~~~-~~~~~~~~ 277 (348)
T 1u5q_A 206 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-------AMSALYHIAQNE-SPALQSGH 277 (348)
T ss_dssp SBCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-------HHHHHHHHHHSC-CCCCCCTT
T ss_pred CCCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-------hHHHHHHHHhcC-CCCCCCCC
Confidence 766677899999999874 5678999999999999999999999996421 112222222211 11111111
Q ss_pred hhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccC
Q 047954 506 ISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVT 550 (582)
Q Consensus 506 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 550 (582)
....+.+++.+||+.||++|||+++++++.+.....
T Consensus 278 ---------~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~~ 313 (348)
T 1u5q_A 278 ---------WSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 313 (348)
T ss_dssp ---------SCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCC
T ss_pred ---------CCHHHHHHHHHHcccChhhCcCHHHHhhChhhhccC
Confidence 112577899999999999999999999998876543
No 57
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.6e-41 Score=346.80 Aligned_cols=248 Identities=19% Similarity=0.298 Sum_probs=200.3
Q ss_pred ccccccccCceEEEEEEEc-CCceEEEEEecCCCc------chHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEE
Q 047954 272 PAEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKP------LITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYK 344 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 344 (582)
..+.||+|+||.||+|... ++..||+|.+..... ...+.+.+|+.++++++||||+++++++......++|||
T Consensus 15 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 94 (326)
T 2y0a_A 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILE 94 (326)
T ss_dssp EEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred eceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEE
Confidence 3567999999999999975 578899999864322 246789999999999999999999999999999999999
Q ss_pred eCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCC----ceEEee
Q 047954 345 FAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNE----MVLVSD 420 (582)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~----~~kl~D 420 (582)
|+++|+|.+++... ..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|
T Consensus 95 ~~~~~~L~~~l~~~------~~~~~~~~~~i~~qi~~al~~lH~~~-------ivH~Dlkp~NIll~~~~~~~~~~kl~D 161 (326)
T 2y0a_A 95 LVAGGELFDFLAEK------ESLTEEEATEFLKQILNGVYYLHSLQ-------IAHFDLKPENIMLLDRNVPKPRIKIID 161 (326)
T ss_dssp CCCSCBHHHHHTTS------SCCBHHHHHHHHHHHHHHHHHHHHTT-------EECCCCCGGGEEESCSSSSSCCEEECC
T ss_pred cCCCCCHHHHHHhc------CCcCHHHHHHHHHHHHHHHHHHHHCC-------eEcCCCCHHHEEEecCCCCCCCEEEEE
Confidence 99999999999643 25899999999999999999999998 99999999999999887 799999
Q ss_pred ccccccccCc---ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcc
Q 047954 421 YGFSSLVAQP---IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEW 497 (582)
Q Consensus 421 fG~a~~~~~~---~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (582)
||+++..... ....+++.|+|||++.+..++.++|||||||++|||++|+.||.... ..+....+ .....
T Consensus 162 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~----~~~~~~~~---~~~~~ 234 (326)
T 2y0a_A 162 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT----KQETLANV---SAVNY 234 (326)
T ss_dssp CTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS----HHHHHHHH---HHTCC
T ss_pred CCCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC----HHHHHHHH---HhcCC
Confidence 9999876433 23457889999999998999999999999999999999999996421 11111111 11110
Q ss_pred cccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhc
Q 047954 498 TAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547 (582)
Q Consensus 498 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 547 (582)
...+ .. .......+.+++.+||..||++|||+.|+++|.+..
T Consensus 235 --~~~~-~~-----~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~ 276 (326)
T 2y0a_A 235 --EFED-EY-----FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276 (326)
T ss_dssp --CCCH-HH-----HTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTS
T ss_pred --CcCc-cc-----cccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCcc
Confidence 0000 00 001123577899999999999999999999998754
No 58
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=3.4e-42 Score=367.50 Aligned_cols=250 Identities=26% Similarity=0.418 Sum_probs=199.8
Q ss_pred ccccccccCceEEEEEEEcCCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCCh
Q 047954 272 PAEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNL 351 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 351 (582)
..+.||+|+||.||+|.+.++..||||+++... ...+.|.+|+.+|++++||||+++++++.. +..++||||+++|+|
T Consensus 188 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL 265 (452)
T 1fmk_A 188 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL 265 (452)
T ss_dssp EEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBH
T ss_pred eeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCH
Confidence 356899999999999999988889999997543 346789999999999999999999999866 678999999999999
Q ss_pred HHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccCcc
Q 047954 352 FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI 431 (582)
Q Consensus 352 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~~~ 431 (582)
.+++..... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 266 ~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~-------ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 334 (452)
T 1fmk_A 266 LDFLKGETG----KYLRLPQLVDMAAQIASGMAYVERMN-------YVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334 (452)
T ss_dssp HHHHSHHHH----TTCCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCSGGGEEECGGGCEEECCCCTTC------
T ss_pred HHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhCC-------eeCCCCChhhEEECCCCCEEECCCccceecCCCc
Confidence 999964321 24888999999999999999999998 9999999999999999999999999998764322
Q ss_pred -----cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHHHHHHhhcccccccchh
Q 047954 432 -----AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSE 505 (582)
Q Consensus 432 -----~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 505 (582)
...++..|+|||.+.+..++.++|||||||++|||+| |+.||... ...++...+ ........
T Consensus 335 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~----~~~~~~~~i----~~~~~~~~---- 402 (452)
T 1fmk_A 335 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM----VNREVLDQV----ERGYRMPC---- 402 (452)
T ss_dssp --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC----CHHHHHHHH----HTTCCCCC----
T ss_pred eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCC----CHHHHHHHH----HcCCCCCC----
Confidence 2234578999999988899999999999999999999 99999642 222222222 22211111
Q ss_pred hhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCCC
Q 047954 506 ISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTES 552 (582)
Q Consensus 506 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 552 (582)
+......+.+++.+||+.||++|||++++++.|+.+.....
T Consensus 403 ------~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~ 443 (452)
T 1fmk_A 403 ------PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 443 (452)
T ss_dssp ------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred ------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCC
Confidence 01112357889999999999999999999999998875443
No 59
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-41 Score=346.17 Aligned_cols=249 Identities=20% Similarity=0.322 Sum_probs=201.3
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCCh
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNL 351 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 351 (582)
.+.||+|+||.||+|... ++..||+|.+... ....+.+.+|+.++++++||||+++++++.+.+..++||||+++|+|
T Consensus 10 ~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L 88 (321)
T 1tki_A 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDI 88 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBH
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCH
Confidence 467999999999999975 5678999998643 34456788999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecC--CCceEEeeccccccccC
Q 047954 352 FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDD--NEMVLVSDYGFSSLVAQ 429 (582)
Q Consensus 352 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~--~~~~kl~DfG~a~~~~~ 429 (582)
.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||+++....
T Consensus 89 ~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~g-------ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~ 156 (321)
T 1tki_A 89 FERINTSA-----FELNEREIVSYVHQVCEALQFLHSHN-------IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP 156 (321)
T ss_dssp HHHHTSSS-----CCCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred HHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCC-------CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCC
Confidence 99996432 24889999999999999999999998 999999999999987 78999999999987754
Q ss_pred cc---cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccchhh
Q 047954 430 PI---AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEI 506 (582)
Q Consensus 430 ~~---~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 506 (582)
.. ...+++.|+|||++.+..++.++|||||||++|||++|+.||.... ...+...+ ...... ++...
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~----~~~~~~~i---~~~~~~---~~~~~ 226 (321)
T 1tki_A 157 GDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET----NQQIIENI---MNAEYT---FDEEA 226 (321)
T ss_dssp TCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS----HHHHHHHH---HHTCCC---CCHHH
T ss_pred CCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCC----HHHHHHHH---HcCCCC---CChhh
Confidence 32 2347789999999998889999999999999999999999996422 12222221 111111 00000
Q ss_pred hhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhccc
Q 047954 507 SVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKV 549 (582)
Q Consensus 507 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 549 (582)
......++.+++.+||..||++|||+.|+++|.|....
T Consensus 227 -----~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~ 264 (321)
T 1tki_A 227 -----FKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK 264 (321)
T ss_dssp -----HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred -----hccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhccC
Confidence 00112357889999999999999999999999886543
No 60
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.4e-41 Score=340.35 Aligned_cols=254 Identities=18% Similarity=0.287 Sum_probs=200.7
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCC---CcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDL---KPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 348 (582)
.+.||+|+||.||+|... ++..||+|++... .....+.+.+|+.++.+++||||+++++++...+..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g 95 (294)
T 4eqm_A 16 VDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEG 95 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCC
Confidence 467999999999999964 6788999998543 233456789999999999999999999999999999999999999
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccccc
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~ 428 (582)
|+|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 96 ~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~-------i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 162 (294)
T 4eqm_A 96 PTLSEYIESHG------PLSVDTAINFTNQILDGIKHAHDMR-------IVHRDIKPQNILIDSNKTLKIFDFGIAKALS 162 (294)
T ss_dssp CBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHTT-------CCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred CCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------cccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence 99999997532 4889999999999999999999998 9999999999999999999999999998765
Q ss_pred Ccc-----cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccc
Q 047954 429 QPI-----AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFD 503 (582)
Q Consensus 429 ~~~-----~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 503 (582)
... ...+++.|+|||.+.+..++.++|||||||++|||+||+.||.... ............. ...
T Consensus 163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~-------~~~~~~~~~~~~~-~~~-- 232 (294)
T 4eqm_A 163 ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET-------AVSIAIKHIQDSV-PNV-- 232 (294)
T ss_dssp ------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSC-------HHHHHHHHHSSCC-CCH--
T ss_pred cccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC-------hHHHHHHHhhccC-CCc--
Confidence 432 2347889999999999999999999999999999999999996422 1111122222111 100
Q ss_pred hhhhhhhchHHHHHHHHHHHHHcccCCCCCCC-ChHHHHHHHhhcccCCCC
Q 047954 504 SEISVQRSAAHGMLKLLQVAIQCCNKSPEKRP-EMAEVVSELEIIKVTEST 553 (582)
Q Consensus 504 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-s~~evl~~L~~i~~~~~~ 553 (582)
... ........+.+++.+||+.||++|| +++++.+.|+.+......
T Consensus 233 -~~~---~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~ 279 (294)
T 4eqm_A 233 -TTD---VRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRA 279 (294)
T ss_dssp -HHH---SCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSST
T ss_pred -chh---cccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccC
Confidence 000 0011123578899999999999998 899999999988755543
No 61
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=3.1e-41 Score=339.70 Aligned_cols=256 Identities=13% Similarity=0.169 Sum_probs=203.1
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCCCcchHHHHHHHHHHHhcC-CCCCccccceEEEeCCeeEEEEEeCCCCC
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDLKPLITEEFRKQLLVIADQ-KHPNLLPLLAYYFSNDEKLLVYKFAGNGN 350 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~gs 350 (582)
.+.||+|+||.||+|.. .+++.||||++.... ..+.+.+|+.++.++ +|+|++++++++......++||||+ +++
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 91 (298)
T 1csn_A 15 GRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPS 91 (298)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCC
Confidence 46799999999999995 578899999986432 234578899999999 8999999999999999999999999 999
Q ss_pred hHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCc-----eEEeeccccc
Q 047954 351 LFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM-----VLVSDYGFSS 425 (582)
Q Consensus 351 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~-----~kl~DfG~a~ 425 (582)
|.+++..... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++. +||+|||+++
T Consensus 92 L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~-------ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~ 159 (298)
T 1csn_A 92 LEDLLDLCGR-----KFSVKTVAMAAKQMLARVQSIHEKS-------LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159 (298)
T ss_dssp HHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHTTT-------EECCCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred HHHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHhCC-------EecCCCCHHHEEeccCCCCCCCeEEEEECcccc
Confidence 9999975432 4889999999999999999999998 999999999999987776 9999999998
Q ss_pred cccCc-----------ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHh
Q 047954 426 LVAQP-----------IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVR 494 (582)
Q Consensus 426 ~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 494 (582)
..... ....++..|+|||.+.+..++.++|||||||++|||++|+.||...... ........+.....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~ 238 (298)
T 1csn_A 160 FYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAA-TNKQKYERIGEKKQ 238 (298)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSC-CHHHHHHHHHHHHH
T ss_pred ccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcc-ccHHHHHHHHhhcc
Confidence 76543 2234778899999999999999999999999999999999999754321 11112222211111
Q ss_pred hcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCCCCc
Q 047954 495 EEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTESTE 554 (582)
Q Consensus 495 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 554 (582)
.....+. ......++.+++.+||+.||++||++++|++.|+.+.......
T Consensus 239 ~~~~~~~----------~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~~ 288 (298)
T 1csn_A 239 STPLREL----------CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTT 288 (298)
T ss_dssp HSCHHHH----------TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred CccHHHH----------HhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCCC
Confidence 1100000 0011236888999999999999999999999999987655443
No 62
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.1e-41 Score=347.77 Aligned_cols=252 Identities=20% Similarity=0.342 Sum_probs=183.6
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCCcchHHHHHHHHHHHhcCC-CCCccccceEEEeCCeeEEEEEeCCCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKPLITEEFRKQLLVIADQK-HPNLLPLLAYYFSNDEKLLVYKFAGNGN 350 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~~~~gs 350 (582)
.+.||+|+||.||+|... +++.||||++.. .....+.+|+.++.++. ||||+++++++.+....++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISK---RMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEG---GGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEECh---hhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 467999999999999975 578899999854 34567889999999997 9999999999999999999999999999
Q ss_pred hHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCC---ceEEeeccccccc
Q 047954 351 LFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNE---MVLVSDYGFSSLV 427 (582)
Q Consensus 351 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~---~~kl~DfG~a~~~ 427 (582)
|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++ .+||+|||+++..
T Consensus 93 L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~LH~~~-------ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 159 (325)
T 3kn6_A 93 LFERIKKKK------HFSETEASYIMRKLVSAVSHMHDVG-------VVHRDLKPENLLFTDENDNLEIKIIDFGFARLK 159 (325)
T ss_dssp HHHHHHHCS------CCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCCGGGEEEEC----CEEEECCCTTCEEC
T ss_pred HHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------CeecCCCHHHEEEecCCCcccEEEeccccceec
Confidence 999997542 5889999999999999999999998 99999999999997665 7999999999866
Q ss_pred cCcc----cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccc
Q 047954 428 AQPI----AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFD 503 (582)
Q Consensus 428 ~~~~----~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 503 (582)
.... ...++..|+|||++.+..++.++|||||||++|||++|+.||.................. +...... ...
T Consensus 160 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~-i~~~~~~-~~~ 237 (325)
T 3kn6_A 160 PPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKK-IKKGDFS-FEG 237 (325)
T ss_dssp CC----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHH-HTTTCCC-CCS
T ss_pred CCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHH-HHcCCCC-CCc
Confidence 4432 234578899999999999999999999999999999999999754332222222222222 2211110 000
Q ss_pred hhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 504 SEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 504 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
. .......++.+++.+||+.||++|||+.|+++|.|...
T Consensus 238 ~------~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~ 276 (325)
T 3kn6_A 238 E------AWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQD 276 (325)
T ss_dssp H------HHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCT
T ss_pred c------cccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhcc
Confidence 0 00112236788999999999999999999998877543
No 63
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.2e-41 Score=342.79 Aligned_cols=253 Identities=22% Similarity=0.355 Sum_probs=193.1
Q ss_pred cccccccCceEEEEEEEcCCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCChH
Q 047954 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLF 352 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 352 (582)
.+.||+|+||.||+|... ++.||||++... ...+.+.+|+.++++++||||+++++++. +..++||||+++|+|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~ 87 (307)
T 2eva_A 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLY 87 (307)
T ss_dssp EEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTTCBHH
T ss_pred eeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCCCCHH
Confidence 467999999999999876 577999998643 34678999999999999999999999876 4579999999999999
Q ss_pred HHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCc-eEEeeccccccccCc-
Q 047954 353 NRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM-VLVSDYGFSSLVAQP- 430 (582)
Q Consensus 353 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~-~kl~DfG~a~~~~~~- 430 (582)
+++..... ...+++..++.++.|+++||+|||+.+ ..+|+||||||+|||++.++. +||+|||++......
T Consensus 88 ~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~----~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~ 160 (307)
T 2eva_A 88 NVLHGAEP---LPYYTAAHAMSWCLQCSQGVAYLHSMQ----PKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM 160 (307)
T ss_dssp HHHHCSSS---EECCCHHHHHHHHHHHHHHHHHHHTCS----SSCCCCCCCSGGGEEEETTTTEEEECCCCC--------
T ss_pred HHHhccCC---CCccCHHHHHHHHHHHHHHHHHHHhCC----CCCeecCCCChhHEEEeCCCCEEEEccccccccccccc
Confidence 99975432 124778889999999999999999932 012999999999999998886 799999999766443
Q ss_pred ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccchhhhhhh
Q 047954 431 IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQR 510 (582)
Q Consensus 431 ~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 510 (582)
....++..|+|||.+.+..++.++|||||||++|||+||+.||..... ......... ..........
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----~~~~~~~~~-~~~~~~~~~~------- 227 (307)
T 2eva_A 161 TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGG-----PAFRIMWAV-HNGTRPPLIK------- 227 (307)
T ss_dssp ----CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCS-----SHHHHHHHH-HTTCCCCCBT-------
T ss_pred ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCc-----cHHHHHHHH-hcCCCCCccc-------
Confidence 234578899999999999999999999999999999999999964321 111111111 1111111110
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCCCC
Q 047954 511 SAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTEST 553 (582)
Q Consensus 511 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 553 (582)
.....+.+++.+||+.||++|||+.+++++|+.+......
T Consensus 228 ---~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 267 (307)
T 2eva_A 228 ---NLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPG 267 (307)
T ss_dssp ---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCC
T ss_pred ---ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccC
Confidence 1112577899999999999999999999999998765543
No 64
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=9.7e-42 Score=346.04 Aligned_cols=254 Identities=24% Similarity=0.407 Sum_probs=203.4
Q ss_pred ccccccccCceEEEEEEE------cCCceEEEEEecCCC-cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEE
Q 047954 272 PAEGLGKGIFGNSYKALL------EGRAPVVVKRLRDLK-PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYK 344 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 344 (582)
..+.||+|+||.||+|.. .++..||||+++... ....+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 106 (314)
T 2ivs_A 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVE 106 (314)
T ss_dssp EEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEe
Confidence 457899999999999986 234789999997543 3345778999999999999999999999999999999999
Q ss_pred eCCCCChHHHHhcCCCCC------------------CCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCC
Q 047954 345 FAGNGNLFNRIHGGKSSK------------------NRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKST 406 (582)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~ 406 (582)
|+++|+|.+++....... ....+++..++.++.||+.||+|||+++ |+||||||+
T Consensus 107 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-------ivH~dikp~ 179 (314)
T 2ivs_A 107 YAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK-------LVHRDLAAR 179 (314)
T ss_dssp CCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT-------EECCCCSGG
T ss_pred ecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC-------Ccccccchh
Confidence 999999999998654210 1234889999999999999999999998 999999999
Q ss_pred CeeecCCCceEEeeccccccccCc------ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCC
Q 047954 407 NILLDDNEMVLVSDYGFSSLVAQP------IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQG 479 (582)
Q Consensus 407 NILl~~~~~~kl~DfG~a~~~~~~------~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~ 479 (582)
|||++.++.+||+|||+++..... ....+++.|+|||.+.+..++.++|||||||++|||+| |+.||....
T Consensus 180 NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~-- 257 (314)
T 2ivs_A 180 NILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP-- 257 (314)
T ss_dssp GEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC--
T ss_pred eEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC--
Confidence 999999999999999999766432 12235677999999988889999999999999999999 999996432
Q ss_pred CCccchHHHHHHHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccC
Q 047954 480 INGADLCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVT 550 (582)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 550 (582)
...+...+ ......... .....++.+++.+||+.||++|||+.|++++|+.+...
T Consensus 258 --~~~~~~~~----~~~~~~~~~----------~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 258 --PERLFNLL----KTGHRMERP----------DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp --GGGHHHHH----HTTCCCCCC----------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred --HHHHHHHh----hcCCcCCCC----------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 22222222 111111110 01123578899999999999999999999999987643
No 65
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=7e-42 Score=351.66 Aligned_cols=254 Identities=23% Similarity=0.411 Sum_probs=202.4
Q ss_pred cccccccCceEEEEEEEcC------CceEEEEEecCCC-cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEe
Q 047954 273 AEGLGKGIFGNSYKALLEG------RAPVVVKRLRDLK-PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKF 345 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 345 (582)
.+.||+|+||.||+|...+ +..||||+++... ....+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 52 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 131 (343)
T 1luf_A 52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEY 131 (343)
T ss_dssp EEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEec
Confidence 4679999999999999753 4789999997543 33456799999999999999999999999999999999999
Q ss_pred CCCCChHHHHhcCCCCC------------------CCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCC
Q 047954 346 AGNGNLFNRIHGGKSSK------------------NRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTN 407 (582)
Q Consensus 346 ~~~gsL~~~l~~~~~~~------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~N 407 (582)
+++|+|.+++....... ....+++..++.++.||+.||+|||+++ |+||||||+|
T Consensus 132 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~-------ivH~Dlkp~N 204 (343)
T 1luf_A 132 MAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK-------FVHRDLATRN 204 (343)
T ss_dssp CTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCSGGG
T ss_pred CCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-------eecCCCCcce
Confidence 99999999997643210 0146899999999999999999999998 9999999999
Q ss_pred eeecCCCceEEeeccccccccCc------ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCC
Q 047954 408 ILLDDNEMVLVSDYGFSSLVAQP------IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGI 480 (582)
Q Consensus 408 ILl~~~~~~kl~DfG~a~~~~~~------~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~ 480 (582)
||++.++.+||+|||+++..... ....++..|+|||.+.+..++.++|||||||++|||+| |+.||....
T Consensus 205 Il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~--- 281 (343)
T 1luf_A 205 CLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA--- 281 (343)
T ss_dssp EEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC---
T ss_pred EEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC---
Confidence 99999999999999998765332 22345678999999988899999999999999999999 999996421
Q ss_pred CccchHHHHHHHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCC
Q 047954 481 NGADLCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTE 551 (582)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 551 (582)
..++.. .+......... .....++.+++.+||+.||++|||+.+++++|+.+....
T Consensus 282 -~~~~~~----~~~~~~~~~~~----------~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 282 -HEEVIY----YVRDGNILACP----------ENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp -HHHHHH----HHHTTCCCCCC----------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred -hHHHHH----HHhCCCcCCCC----------CCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 122221 12221111111 011225788999999999999999999999999987543
No 66
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.1e-41 Score=337.25 Aligned_cols=246 Identities=25% Similarity=0.426 Sum_probs=202.7
Q ss_pred cccccccCceEEEEEEEcCCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCChH
Q 047954 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLF 352 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 352 (582)
.+.||+|+||.||+|...++..||+|++..... ..+.+.+|++++++++||||+++++++...+..++||||+++++|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (267)
T 3t9t_A 13 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLS 91 (267)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHH
T ss_pred eeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHH
Confidence 467999999999999998888999999976433 4578999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccCc--
Q 047954 353 NRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP-- 430 (582)
Q Consensus 353 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~~-- 430 (582)
+++..... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 92 ~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~-------i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 159 (267)
T 3t9t_A 92 DYLRTQRG-----LFAAETLLGMCLDVCEGMAYLEEAC-------VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 159 (267)
T ss_dssp HHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHTT-------CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred HHHhhCcc-----cCCHHHHHHHHHHHHHHHHHHHhCC-------cccCCCchheEEECCCCCEEEcccccccccccccc
Confidence 99975432 4788999999999999999999998 999999999999999999999999999876432
Q ss_pred ---ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHHHHHHhhcccccccchhh
Q 047954 431 ---IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEI 506 (582)
Q Consensus 431 ---~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 506 (582)
....++..|+|||.+.+..++.++||||||+++|||++ |+.||.... ....... +....... ...
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~----~~~~~~~----i~~~~~~~-~~~-- 228 (267)
T 3t9t_A 160 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS----NSEVVED----ISTGFRLY-KPR-- 228 (267)
T ss_dssp HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC----HHHHHHH----HHTTCCCC-CCT--
T ss_pred cccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCC----HHHHHHH----HhcCCcCC-CCc--
Confidence 22335567999999988889999999999999999999 899986421 1122211 11111110 000
Q ss_pred hhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhccc
Q 047954 507 SVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKV 549 (582)
Q Consensus 507 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 549 (582)
.....+.+++.+||+.||++|||+.+++++|+.+..
T Consensus 229 -------~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 229 -------LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp -------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -------cCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 011257789999999999999999999999998864
No 67
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=6.1e-42 Score=342.25 Aligned_cols=248 Identities=21% Similarity=0.406 Sum_probs=190.7
Q ss_pred ccccccccCceEEEEEEEcC----CceEEEEEecCCC-cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeC
Q 047954 272 PAEGLGKGIFGNSYKALLEG----RAPVVVKRLRDLK-PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFA 346 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 346 (582)
..+.||+|+||.||+|.... +..||+|++.... ....+.+.+|+.++++++||||+++++++ ..+..++||||+
T Consensus 19 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~ 97 (281)
T 1mp8_A 19 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELC 97 (281)
T ss_dssp EEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEEEEECC
T ss_pred EEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccEEEEecC
Confidence 35789999999999998743 3469999986543 33456789999999999999999999997 456789999999
Q ss_pred CCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccc
Q 047954 347 GNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSL 426 (582)
Q Consensus 347 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~ 426 (582)
++|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 98 ~~~~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~-------i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 165 (281)
T 1mp8_A 98 TLGELRSFLQVRK-----YSLDLASLILYAYQLSTALAYLESKR-------FVHRDIAARNVLVSSNDCVKLGDFGLSRY 165 (281)
T ss_dssp TTEEHHHHHHHTT-----TTSCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCSGGGEEEEETTEEEECC------
T ss_pred CCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhCC-------eecccccHHHEEECCCCCEEECccccccc
Confidence 9999999997543 24889999999999999999999998 99999999999999999999999999987
Q ss_pred ccCcc-----cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHHHHHHhhccccc
Q 047954 427 VAQPI-----AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAE 500 (582)
Q Consensus 427 ~~~~~-----~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (582)
..... ...+++.|+|||.+.+..++.++|||||||++|||++ |+.||.... ..+....+.. .. ...
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~----~~~~~~~i~~---~~-~~~ 237 (281)
T 1mp8_A 166 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK----NNDVIGRIEN---GE-RLP 237 (281)
T ss_dssp -------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCC----GGGHHHHHHT---TC-CCC
T ss_pred cCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCC----HHHHHHHHHc---CC-CCC
Confidence 65432 2234568999999988899999999999999999997 999996432 2223222211 11 111
Q ss_pred ccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccC
Q 047954 501 IFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVT 550 (582)
Q Consensus 501 ~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 550 (582)
. .+ .....+.+++.+||+.||++|||+.|++++|+.+...
T Consensus 238 ~-~~---------~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 238 M-PP---------NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp C-CT---------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred C-CC---------CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 0 11 1123577899999999999999999999999988643
No 68
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-41 Score=353.92 Aligned_cols=248 Identities=19% Similarity=0.329 Sum_probs=201.2
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCCh
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNL 351 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 351 (582)
.+.||+|+||.||+|... ++..||+|.+..........+.+|+.++++++||||+++++++.+....++||||+++|+|
T Consensus 56 ~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L 135 (387)
T 1kob_A 56 LEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGEL 135 (387)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBH
T ss_pred EEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcH
Confidence 467999999999999975 5788999998765555567889999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecC--CCceEEeeccccccccC
Q 047954 352 FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDD--NEMVLVSDYGFSSLVAQ 429 (582)
Q Consensus 352 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~--~~~~kl~DfG~a~~~~~ 429 (582)
.+++.... ..+++..++.++.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||+++....
T Consensus 136 ~~~l~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g-------ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~ 203 (387)
T 1kob_A 136 FDRIAAED-----YKMSEAEVINYMRQACEGLKHMHEHS-------IVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 203 (387)
T ss_dssp HHHTTCTT-----CCBCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred HHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC-------eeecccchHHeEEecCCCCceEEEecccceecCC
Confidence 99986432 24889999999999999999999998 999999999999974 56799999999987654
Q ss_pred cc---cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccchhh
Q 047954 430 PI---AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEI 506 (582)
Q Consensus 430 ~~---~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 506 (582)
.. ...+|+.|+|||++.+..++.++|||||||++|||+||+.||.... .... ........+.. +...
T Consensus 204 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~----~~~~---~~~i~~~~~~~---~~~~ 273 (387)
T 1kob_A 204 DEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGED----DLET---LQNVKRCDWEF---DEDA 273 (387)
T ss_dssp TSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS----HHHH---HHHHHHCCCCC---CSST
T ss_pred CcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCC----HHHH---HHHHHhCCCCC---Cccc
Confidence 32 3357889999999999999999999999999999999999996421 1122 22221111110 0000
Q ss_pred hhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhc
Q 047954 507 SVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547 (582)
Q Consensus 507 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 547 (582)
......++.+++.+||+.||++|||+.|++++.+..
T Consensus 274 -----~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~ 309 (387)
T 1kob_A 274 -----FSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLK 309 (387)
T ss_dssp -----TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTS
T ss_pred -----cccCCHHHHHHHHHHcCCChhHCcCHHHHhhCcccc
Confidence 001122578899999999999999999999997754
No 69
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=2.3e-41 Score=336.01 Aligned_cols=246 Identities=28% Similarity=0.440 Sum_probs=187.6
Q ss_pred cccccccCceEEEEEEEcCCceEEEEEecCCCc----chHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKP----LITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 348 (582)
.+.||+|+||.||+|... +..||||+++.... ...+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 12 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 90 (271)
T 3dtc_A 12 EEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARG 90 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTT
T ss_pred eeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCC
Confidence 467999999999999975 67899999864322 2346789999999999999999999999999999999999999
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecC--------CCceEEee
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDD--------NEMVLVSD 420 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~--------~~~~kl~D 420 (582)
++|.+++... .+++..++.++.|++.||+|||+++ ..+|+||||||+|||++. ++.+||+|
T Consensus 91 ~~L~~~~~~~-------~~~~~~~~~i~~~l~~~l~~lH~~~----~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 91 GPLNRVLSGK-------RIPPDILVNWAVQIARGMNYLHDEA----IVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp EEHHHHHTSS-------CCCHHHHHHHHHHHHHHHHHHHHSS----SSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred CCHHHHhhcC-------CCCHHHHHHHHHHHHHHHHHHHhCC----CCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 9999998532 4888999999999999999999986 224889999999999986 67899999
Q ss_pred ccccccccCcc--cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhccc
Q 047954 421 YGFSSLVAQPI--AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWT 498 (582)
Q Consensus 421 fG~a~~~~~~~--~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (582)
||+++...... ...++..|+|||.+.+..++.++||||||+++|||++|+.||.... .. ............
T Consensus 160 fg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~----~~---~~~~~~~~~~~~ 232 (271)
T 3dtc_A 160 FGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID----GL---AVAYGVAMNKLA 232 (271)
T ss_dssp CCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSC----HH---HHHHHHHTSCCC
T ss_pred CCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----HH---HHHHhhhcCCCC
Confidence 99998764432 3457889999999988899999999999999999999999996421 11 111111111111
Q ss_pred ccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhc
Q 047954 499 AEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547 (582)
Q Consensus 499 ~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 547 (582)
... .. .....+.+++.+||+.||++|||+.|++++|+.+
T Consensus 233 ~~~-~~---------~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 233 LPI-PS---------TCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp CCC-CT---------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred CCC-Cc---------ccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 111 10 1123578899999999999999999999999864
No 70
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=6e-42 Score=354.53 Aligned_cols=253 Identities=23% Similarity=0.349 Sum_probs=199.9
Q ss_pred cccccccCceEEEEEEEc------CCceEEEEEecCCC-cchHHHHHHHHHHHhcC-CCCCccccceEEEeCCe-eEEEE
Q 047954 273 AEGLGKGIFGNSYKALLE------GRAPVVVKRLRDLK-PLITEEFRKQLLVIADQ-KHPNLLPLLAYYFSNDE-KLLVY 343 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~-~~lv~ 343 (582)
.+.||+|+||.||+|.+. +++.||||+++... ....+.+.+|++++.++ +|||||++++++...+. .++||
T Consensus 27 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~ 106 (359)
T 3vhe_A 27 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 106 (359)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEE
T ss_pred ceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEE
Confidence 467999999999999743 34689999997543 33456799999999999 88999999999987654 89999
Q ss_pred EeCCCCChHHHHhcCCCCC------------------------------------------------------------C
Q 047954 344 KFAGNGNLFNRIHGGKSSK------------------------------------------------------------N 363 (582)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~------------------------------------------------------------~ 363 (582)
||+++|+|.+++....... .
T Consensus 107 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (359)
T 3vhe_A 107 EFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLY 186 (359)
T ss_dssp ECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------------CTT
T ss_pred EecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccchh
Confidence 9999999999998653210 0
Q ss_pred CCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccCcc------cccccc
Q 047954 364 RIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI------AAQRMI 437 (582)
Q Consensus 364 ~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~~~------~~~~~~ 437 (582)
...+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...... ...++.
T Consensus 187 ~~~l~~~~~~~~~~ql~~aL~~LH~~~-------ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~ 259 (359)
T 3vhe_A 187 KDFLTLEHLICYSFQVAKGMEFLASRK-------CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 259 (359)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECG
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHCC-------cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCc
Confidence 112889999999999999999999998 9999999999999999999999999998764321 233567
Q ss_pred cccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHHHHHHhhcccccccchhhhhhhchHHHH
Q 047954 438 SYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQRSAAHGM 516 (582)
Q Consensus 438 ~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 516 (582)
.|+|||++.+..++.++|||||||++|||+| |+.||..... .. .+.............+ ...
T Consensus 260 ~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~---~~----~~~~~~~~~~~~~~~~----------~~~ 322 (359)
T 3vhe_A 260 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI---DE----EFCRRLKEGTRMRAPD----------YTT 322 (359)
T ss_dssp GGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC---SH----HHHHHHHHTCCCCCCT----------TCC
T ss_pred eeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccch---hH----HHHHHHHcCCCCCCCC----------CCC
Confidence 8999999988999999999999999999999 9999964321 11 1222222221111110 011
Q ss_pred HHHHHHHHHcccCCCCCCCChHHHHHHHhhccc
Q 047954 517 LKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKV 549 (582)
Q Consensus 517 ~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 549 (582)
.++.+++.+||+.||++|||+.|++++|+.+..
T Consensus 323 ~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 355 (359)
T 3vhe_A 323 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 355 (359)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 257889999999999999999999999998764
No 71
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=3.5e-41 Score=344.46 Aligned_cols=243 Identities=22% Similarity=0.322 Sum_probs=192.3
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCC-cchHHHHHHHHHHHhcCCCCCccccceEEEeCC-------------
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK-PLITEEFRKQLLVIADQKHPNLLPLLAYYFSND------------- 337 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------------- 337 (582)
.+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|+.++++++|||||++++++.+..
T Consensus 11 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~ 90 (332)
T 3qd2_B 11 IQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWL 90 (332)
T ss_dssp EEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC---
T ss_pred eeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhh
Confidence 467999999999999976 78899999996433 345678999999999999999999999986643
Q ss_pred --------------------------------------------eeEEEEEeCCCCChHHHHhcCCCCCCCCccchHHHH
Q 047954 338 --------------------------------------------EKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRL 373 (582)
Q Consensus 338 --------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~ 373 (582)
..++||||+++|+|.+++..... ....++..++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~ 167 (332)
T 3qd2_B 91 KDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS---LEDREHGVCL 167 (332)
T ss_dssp -----------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS---GGGSCHHHHH
T ss_pred ccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC---ccchhhHHHH
Confidence 27999999999999999986542 2345666789
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccCcc----------------cccccc
Q 047954 374 LVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI----------------AAQRMI 437 (582)
Q Consensus 374 ~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~~~----------------~~~~~~ 437 (582)
.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...... ...+++
T Consensus 168 ~i~~qi~~aL~~LH~~~-------ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (332)
T 3qd2_B 168 HIFIQIAEAVEFLHSKG-------LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240 (332)
T ss_dssp HHHHHHHHHHHHHHHTT-------EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred HHHHHHHHHHHHHHhCC-------eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence 99999999999999998 9999999999999999999999999998765431 234788
Q ss_pred cccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccchhhhhhhchHHHHH
Q 047954 438 SYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQRSAAHGML 517 (582)
Q Consensus 438 ~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 517 (582)
.|+|||.+.+..++.++|||||||++|||++|..|+.. ... ..........+ ........
T Consensus 241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~---------~~~-~~~~~~~~~~~----------~~~~~~~~ 300 (332)
T 3qd2_B 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME---------RVR-IITDVRNLKFP----------LLFTQKYP 300 (332)
T ss_dssp GGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH---------HHH-HHHHHHTTCCC----------HHHHHHCH
T ss_pred CccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH---------HHH-HHHHhhccCCC----------cccccCCh
Confidence 99999999999999999999999999999998766421 111 11111111111 01112233
Q ss_pred HHHHHHHHcccCCCCCCCChHHHHHHHh
Q 047954 518 KLLQVAIQCCNKSPEKRPEMAEVVSELE 545 (582)
Q Consensus 518 ~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 545 (582)
++.+++.+||+.||++|||+.|++++.+
T Consensus 301 ~~~~li~~~l~~~p~~Rps~~~~l~~~~ 328 (332)
T 3qd2_B 301 QEHMMVQDMLSPSPTERPEATDIIENAI 328 (332)
T ss_dssp HHHHHHHHHHCSSGGGSCCHHHHHHSTT
T ss_pred hHHHHHHHHccCCCCcCCCHHHHhhchh
Confidence 5678999999999999999999998765
No 72
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2.8e-41 Score=353.67 Aligned_cols=262 Identities=20% Similarity=0.263 Sum_probs=198.3
Q ss_pred ccccccc--CceEEEEEEEc-CCceEEEEEecCCC--cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCC
Q 047954 273 AEGLGKG--IFGNSYKALLE-GRAPVVVKRLRDLK--PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAG 347 (582)
Q Consensus 273 ~~~lG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 347 (582)
.+.||+| +||.||+|+.. +++.||||++.... ....+.+.+|+.++++++|||||++++++...+..++||||++
T Consensus 30 ~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 109 (389)
T 3gni_B 30 LTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 109 (389)
T ss_dssp EEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred EecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccC
Confidence 4679999 99999999976 68899999996432 3345678899999999999999999999999999999999999
Q ss_pred CCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccc
Q 047954 348 NGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV 427 (582)
Q Consensus 348 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~ 427 (582)
+|+|.+++..... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||.+...
T Consensus 110 ~~~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~-------ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 110 YGSAKDLICTHFM----DGMNELAIAYILQGVLKALDYIHHMG-------YVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp TCBHHHHHHHTCT----TCCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred CCCHHHHHhhhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC-------eecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 9999999976532 24889999999999999999999998 999999999999999999999999987543
Q ss_pred cC-----------cccccccccccCCCCCCC--CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHh
Q 047954 428 AQ-----------PIAAQRMISYKSPEYQSS--KKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVR 494 (582)
Q Consensus 428 ~~-----------~~~~~~~~~y~aPE~~~~--~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 494 (582)
.. .....++..|+|||++.+ ..++.++|||||||++|||++|+.||...... ..+...+.....
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~~~~~~~~~~~~ 255 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPAT---QMLLEKLNGTVP 255 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCST---THHHHC------
T ss_pred ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH---HHHHHHhcCCCC
Confidence 21 112346778999999887 57899999999999999999999999754321 111110000000
Q ss_pred h---------c-------------ccccccc--------hhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHH
Q 047954 495 E---------E-------------WTAEIFD--------SEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSEL 544 (582)
Q Consensus 495 ~---------~-------------~~~~~~d--------~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L 544 (582)
. . ...+... ..............++.+|+.+||+.||++|||+.|+++|.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp 335 (389)
T 3gni_B 256 CLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHS 335 (389)
T ss_dssp --------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSG
T ss_pred ccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCH
Confidence 0 0 0000000 00000000111224688899999999999999999999997
Q ss_pred hhcc
Q 047954 545 EIIK 548 (582)
Q Consensus 545 ~~i~ 548 (582)
+.-.
T Consensus 336 ~f~~ 339 (389)
T 3gni_B 336 FFKQ 339 (389)
T ss_dssp GGGG
T ss_pred HHHH
Confidence 6543
No 73
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=4.2e-41 Score=348.58 Aligned_cols=246 Identities=20% Similarity=0.280 Sum_probs=198.7
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCC--cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK--PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNG 349 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 349 (582)
.+.||+|+||.||+|... ++..||+|++.... ....+.+.+|+.++++++|||||++++++.+.+..++||||+++|
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~gg 113 (362)
T 2bdw_A 34 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 113 (362)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCC
Confidence 567999999999999965 57889999996543 234567889999999999999999999999999999999999999
Q ss_pred ChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCC---ceEEeecccccc
Q 047954 350 NLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNE---MVLVSDYGFSSL 426 (582)
Q Consensus 350 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~---~~kl~DfG~a~~ 426 (582)
+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++ .+||+|||+++.
T Consensus 114 ~L~~~l~~~------~~~~~~~~~~~~~qi~~al~~lH~~~-------ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~ 180 (362)
T 2bdw_A 114 ELFEDIVAR------EFYSEADASHCIQQILESIAYCHSNG-------IVHRNLKPENLLLASKAKGAAVKLADFGLAIE 180 (362)
T ss_dssp BHHHHHTTC------SCCCHHHHHHHHHHHHHHHHHHHHTT-------CBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred CHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCC-------eEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence 999998643 24889999999999999999999998 99999999999998654 599999999987
Q ss_pred ccCcc---cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccc
Q 047954 427 VAQPI---AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFD 503 (582)
Q Consensus 427 ~~~~~---~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 503 (582)
..... ...+++.|+|||++.+..++.++|||||||++|||++|+.||... ....+...+. ..... ...
T Consensus 181 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~----~~~~~~~~i~---~~~~~--~~~ 251 (362)
T 2bdw_A 181 VNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE----DQHRLYAQIK---AGAYD--YPS 251 (362)
T ss_dssp CTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS----SHHHHHHHHH---HTCCC--CCT
T ss_pred ecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCC----CHHHHHHHHH---hCCCC--CCc
Confidence 75432 345788999999999989999999999999999999999999642 1122222221 11110 000
Q ss_pred hhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhh
Q 047954 504 SEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEI 546 (582)
Q Consensus 504 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 546 (582)
+.. .....++.+++.+||+.||++|||+.|+++|.|.
T Consensus 252 ~~~------~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 288 (362)
T 2bdw_A 252 PEW------DTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 288 (362)
T ss_dssp TGG------GGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHH
T ss_pred ccc------cCCCHHHHHHHHHHcCCChhhCcCHHHHhcCccc
Confidence 000 0112357789999999999999999999998764
No 74
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.1e-41 Score=340.06 Aligned_cols=243 Identities=19% Similarity=0.322 Sum_probs=189.0
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCCc--------------------------chHHHHHHHHHHHhcCCCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKP--------------------------LITEEFRKQLLVIADQKHPN 325 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------------------------~~~~~~~~e~~~l~~l~H~n 325 (582)
.+.||+|+||.||+|... +++.||||++..... ...+.+.+|++++++++|||
T Consensus 18 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 97 (298)
T 2zv2_A 18 KDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPN 97 (298)
T ss_dssp EEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTT
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCC
Confidence 467999999999999864 578899999864321 11356889999999999999
Q ss_pred ccccceEEEe--CCeeEEEEEeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCC
Q 047954 326 LLPLLAYYFS--NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNL 403 (582)
Q Consensus 326 iv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dl 403 (582)
|+++++++.+ .+..++||||+++|+|.+++.. ..+++..++.++.||+.||+|||+++ |+||||
T Consensus 98 iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~~-------ivH~Dl 163 (298)
T 2zv2_A 98 VVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL-------KPLSEDQARFYFQDLIKGIEYLHYQK-------IIHRDI 163 (298)
T ss_dssp BCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS-------SCCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCC
T ss_pred CCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHHHCC-------eeccCC
Confidence 9999999987 5678999999999999876432 25889999999999999999999998 999999
Q ss_pred CCCCeeecCCCceEEeeccccccccCc----ccccccccccCCCCCCCCC---CCcchhHHHHHHHHHHHHhCCCCCCCC
Q 047954 404 KSTNILLDDNEMVLVSDYGFSSLVAQP----IAAQRMISYKSPEYQSSKK---ISRKSDVWSFGCLLLELLTGRISTHSA 476 (582)
Q Consensus 404 kp~NILl~~~~~~kl~DfG~a~~~~~~----~~~~~~~~y~aPE~~~~~~---~~~k~DVwS~Gvvl~elltG~~P~~~~ 476 (582)
||+|||++.++.+||+|||+++..... ....+++.|+|||.+.+.. ++.++|||||||++|||++|+.||...
T Consensus 164 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 243 (298)
T 2zv2_A 164 KPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE 243 (298)
T ss_dssp CGGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CHHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCc
Confidence 999999999999999999999876543 2345788999999987665 378899999999999999999999642
Q ss_pred CCCCCccchHHHHHHHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhh
Q 047954 477 PQGINGADLCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEI 546 (582)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 546 (582)
. ....... ....... ..+ . .....++.+++.+||+.||++|||+.|+++|.+.
T Consensus 244 ~-------~~~~~~~-~~~~~~~-~~~-----~---~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~ 296 (298)
T 2zv2_A 244 R-------IMCLHSK-IKSQALE-FPD-----Q---PDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296 (298)
T ss_dssp S-------HHHHHHH-HHHCCCC-CCS-----S---SCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHH
T ss_pred c-------HHHHHHH-HhcccCC-CCC-----c---cccCHHHHHHHHHHhhcChhhCCCHHHHhcCccc
Confidence 1 1111111 1111110 000 0 0111257889999999999999999999988763
No 75
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=3.3e-41 Score=357.89 Aligned_cols=247 Identities=20% Similarity=0.265 Sum_probs=198.0
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCCC--cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCC
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDLK--PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNG 349 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 349 (582)
.+.||+|+||.||+|.. .++..||+|++.... ....+.+.+|+.++++++|||||++++++.+.+..++||||+.+|
T Consensus 16 ~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg 95 (444)
T 3soa_A 16 FEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGG 95 (444)
T ss_dssp EEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBCC
T ss_pred EEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCCC
Confidence 46799999999999986 467889999986543 234467899999999999999999999999999999999999999
Q ss_pred ChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeec---CCCceEEeecccccc
Q 047954 350 NLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLD---DNEMVLVSDYGFSSL 426 (582)
Q Consensus 350 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~---~~~~~kl~DfG~a~~ 426 (582)
+|.+.+.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++ .++.+||+|||+++.
T Consensus 96 ~L~~~i~~~~------~~~e~~~~~i~~qil~aL~~lH~~g-------ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~ 162 (444)
T 3soa_A 96 ELFEDIVARE------YYSEADASHCIQQILEAVLHCHQMG-------VVHRNLKPENLLLASKLKGAAVKLADFGLAIE 162 (444)
T ss_dssp BHHHHHHHCS------CCCHHHHHHHHHHHHHHHHHHHHTT-------CBCCCCSSTTEEESBSSTTCCEEECCCSSCBC
T ss_pred CHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------ccccCCCHHHEEEeccCCCCcEEEccCceeEE
Confidence 9999997542 4889999999999999999999998 99999999999998 467899999999987
Q ss_pred ccCcc----cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhccccccc
Q 047954 427 VAQPI----AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIF 502 (582)
Q Consensus 427 ~~~~~----~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (582)
..... ...+++.|+|||++.+..++.++||||+||++|+|++|+.||... ....+...+. .... ...
T Consensus 163 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~----~~~~~~~~i~---~~~~--~~~ 233 (444)
T 3soa_A 163 VEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDE----DQHRLYQQIK---AGAY--DFP 233 (444)
T ss_dssp CCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCS----SHHHHHHHHH---HTCC--CCC
T ss_pred ecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCc----cHHHHHHHHH---hCCC--CCC
Confidence 65432 345789999999999989999999999999999999999999642 2222222221 1111 011
Q ss_pred chhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhc
Q 047954 503 DSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547 (582)
Q Consensus 503 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 547 (582)
.+.. .....++.+++.+||+.||++|||+.|+++|.|.-
T Consensus 234 ~~~~------~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~ 272 (444)
T 3soa_A 234 SPEW------DTVTPEAKDLINKMLTINPSKRITAAEALKHPWIS 272 (444)
T ss_dssp TTTT------TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTH
T ss_pred cccc------ccCCHHHHHHHHHHcCCChhHCCCHHHHhcCcccc
Confidence 1100 01122577899999999999999999999997743
No 76
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.7e-41 Score=338.36 Aligned_cols=252 Identities=25% Similarity=0.380 Sum_probs=199.8
Q ss_pred ccccccccCceEEEEEEEcCC----ceEEEEEecCCCc-chHHHHHHHHHHHhcCCCCCccccceEEEeCCee-EEEEEe
Q 047954 272 PAEGLGKGIFGNSYKALLEGR----APVVVKRLRDLKP-LITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEK-LLVYKF 345 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~~~~----~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~-~lv~e~ 345 (582)
..+.||+|+||.||+|...+. ..||+|.+..... ...+.+.+|+.++++++||||+++++++.+.+.. ++||||
T Consensus 25 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~ 104 (298)
T 3pls_A 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPY 104 (298)
T ss_dssp EEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECC
T ss_pred cCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEec
Confidence 457899999999999986432 2699999875433 3457889999999999999999999999876665 999999
Q ss_pred CCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccc
Q 047954 346 AGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSS 425 (582)
Q Consensus 346 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~ 425 (582)
+.+|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 105 ~~~~~L~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~-------i~H~dikp~Nili~~~~~~kl~Dfg~~~ 172 (298)
T 3pls_A 105 MCHGDLLQFIRSPQ-----RNPTVKDLISFGLQVARGMEYLAEQK-------FVHRDLAARNCMLDESFTVKVADFGLAR 172 (298)
T ss_dssp CTTCBHHHHHHCTT-----CCCBHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCSGGGEEECTTCCEEECCTTSSC
T ss_pred ccCCCHHHHHhccc-----cCCCHHHHHHHHHHHHHHHHHHHhCC-------cccCCCCcceEEEcCCCcEEeCcCCCcc
Confidence 99999999997532 25889999999999999999999998 9999999999999999999999999998
Q ss_pred cccCc--------ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcc
Q 047954 426 LVAQP--------IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEW 497 (582)
Q Consensus 426 ~~~~~--------~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (582)
..... ....++..|+|||.+.+..++.++||||||+++|||+||..|+.... ...++...+.. ..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~---~~~~~~~~~~~----~~ 245 (298)
T 3pls_A 173 DILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI---DPFDLTHFLAQ----GR 245 (298)
T ss_dssp TTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS---CGGGHHHHHHT----TC
T ss_pred cccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccC---CHHHHHHHhhc----CC
Confidence 65432 12335678999999999999999999999999999999666654321 22233322221 11
Q ss_pred cccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCCC
Q 047954 498 TAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTES 552 (582)
Q Consensus 498 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 552 (582)
.... .. .....+.+++.+||+.||++|||+.++++.|+.+.....
T Consensus 246 ~~~~-~~---------~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~ 290 (298)
T 3pls_A 246 RLPQ-PE---------YCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL 290 (298)
T ss_dssp CCCC-CT---------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCC
T ss_pred CCCC-Cc---------cchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHh
Confidence 1000 00 111257889999999999999999999999999875443
No 77
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=3.3e-41 Score=334.39 Aligned_cols=249 Identities=21% Similarity=0.299 Sum_probs=199.2
Q ss_pred cccccccCceEEEEEEEcCCceEEEEEecCCC--cchHHHHHHHHHHHhcCCCCCccccceEEEeC--CeeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLK--PLITEEFRKQLLVIADQKHPNLLPLLAYYFSN--DEKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~~lv~e~~~~ 348 (582)
.+.||+|+||.||+|+.. +..||||+++... ....+.+.+|+.++++++||||+++++++.+. ...++||||+++
T Consensus 15 ~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~ 93 (271)
T 3kmu_A 15 LTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPY 93 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTT
T ss_pred HHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCC
Confidence 468999999999999986 6789999997543 33456799999999999999999999999887 678999999999
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccccc
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~ 428 (582)
|+|.+++..... ..+++..++.++.||+.||+|||+.++ +|+||||||+|||++.++.++|+|||++....
T Consensus 94 ~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~~-----~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~ 164 (271)
T 3kmu_A 94 GSLYNVLHEGTN----FVVDQSQAVKFALDMARGMAFLHTLEP-----LIPRHALNSRSVMIDEDMTARISMADVKFSFQ 164 (271)
T ss_dssp CBHHHHHHSCSS----CCCCHHHHHHHHHHHHHHHHHHTTSSS-----CCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS
T ss_pred CcHHHHHhhccc----CCCCHHHHHHHHHHHHHHHHHHhcCCC-----ceecCCCccceEEEcCCcceeEEeccceeeec
Confidence 999999986432 258999999999999999999999763 49999999999999999999999998876543
Q ss_pred CcccccccccccCCCCCCCCCCCc---chhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccchh
Q 047954 429 QPIAAQRMISYKSPEYQSSKKISR---KSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSE 505 (582)
Q Consensus 429 ~~~~~~~~~~y~aPE~~~~~~~~~---k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 505 (582)
. ....+++.|+|||.+.+..++. ++|||||||++|||+||+.||.... .................. .
T Consensus 165 ~-~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-------~~~~~~~~~~~~~~~~~~-~- 234 (271)
T 3kmu_A 165 S-PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLS-------NMEIGMKVALEGLRPTIP-P- 234 (271)
T ss_dssp C-TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSC-------HHHHHHHHHHSCCCCCCC-T-
T ss_pred c-cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccC-------hHHHHHHHHhcCCCCCCC-C-
Confidence 3 2345788999999988765544 8999999999999999999996421 111112222222111111 1
Q ss_pred hhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhccc
Q 047954 506 ISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKV 549 (582)
Q Consensus 506 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 549 (582)
....++.+++.+||+.||++|||++|+++.|+.+..
T Consensus 235 --------~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 235 --------GISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp --------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred --------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 112257889999999999999999999999998764
No 78
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=2.5e-41 Score=348.99 Aligned_cols=251 Identities=20% Similarity=0.298 Sum_probs=198.9
Q ss_pred ccccccccCceEEEEEEEc-CCceEEEEEecCC-----CcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEe
Q 047954 272 PAEGLGKGIFGNSYKALLE-GRAPVVVKRLRDL-----KPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKF 345 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 345 (582)
..+.||+|+||.||+|... +++.||||++... .....+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 28 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 107 (351)
T 3c0i_A 28 LCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEF 107 (351)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred EeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeC
Confidence 3578999999999999864 6789999998532 122467899999999999999999999999999999999999
Q ss_pred CCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCc---eEEeecc
Q 047954 346 AGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM---VLVSDYG 422 (582)
Q Consensus 346 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~---~kl~DfG 422 (582)
+++|+|.+++...... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++. +||+|||
T Consensus 108 ~~g~~L~~~l~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~-------ivHrDlkp~NIl~~~~~~~~~vkl~Dfg 178 (351)
T 3c0i_A 108 MDGADLCFEIVKRADA--GFVYSEAVASHYMRQILEALRYCHDNN-------IIHRDVKPHCVLLASKENSAPVKLGGFG 178 (351)
T ss_dssp CSSCBHHHHHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCSGGGEEECSSSTTCCEEECCCT
T ss_pred CCCCCHHHHHHHhccc--CCCCCHHHHHHHHHHHHHHHHHHHHCC-------ceeccCChHHeEEecCCCCCcEEEecCc
Confidence 9999999887643211 224788999999999999999999998 999999999999986654 9999999
Q ss_pred ccccccCcc----cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhccc
Q 047954 423 FSSLVAQPI----AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWT 498 (582)
Q Consensus 423 ~a~~~~~~~----~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (582)
+++...... ...+|+.|+|||++.+..++.++|||||||++|||++|+.||... ...+...+ ......
T Consensus 179 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~-----~~~~~~~i---~~~~~~ 250 (351)
T 3c0i_A 179 VAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT-----KERLFEGI---IKGKYK 250 (351)
T ss_dssp TCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS-----HHHHHHHH---HHTCCC
T ss_pred ceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc-----HHHHHHHH---HcCCCC
Confidence 998765432 234788999999999999999999999999999999999999642 11111111 111110
Q ss_pred ccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhc
Q 047954 499 AEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547 (582)
Q Consensus 499 ~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 547 (582)
..+.. ......++.+++.+||+.||++|||+.|+++|.+..
T Consensus 251 ---~~~~~-----~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~ 291 (351)
T 3c0i_A 251 ---MNPRQ-----WSHISESAKDLVRRMLMLDPAERITVYEALNHPWLK 291 (351)
T ss_dssp ---CCHHH-----HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred ---CCccc-----cccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhc
Confidence 01100 001123578899999999999999999999987643
No 79
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-41 Score=353.31 Aligned_cols=251 Identities=27% Similarity=0.403 Sum_probs=192.2
Q ss_pred ccccccccCceEEEEEEEcC--C--ceEEEEEecCCC-cchHHHHHHHHHHHhcCCCCCccccceEEEe-CCeeEEEEEe
Q 047954 272 PAEGLGKGIFGNSYKALLEG--R--APVVVKRLRDLK-PLITEEFRKQLLVIADQKHPNLLPLLAYYFS-NDEKLLVYKF 345 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~~~--~--~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~-~~~~~lv~e~ 345 (582)
..+.||+|+||.||+|...+ + ..||||.++... ....+.|.+|+.++++++||||+++++++.. .+..++||||
T Consensus 93 ~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~ 172 (373)
T 3c1x_A 93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY 172 (373)
T ss_dssp EEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEEC
T ss_pred cCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEEC
Confidence 35689999999999998642 2 358999986533 3456789999999999999999999999765 4578999999
Q ss_pred CCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccc
Q 047954 346 AGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSS 425 (582)
Q Consensus 346 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~ 425 (582)
+++|+|.+++.... ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 173 ~~~g~L~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~-------ivHrDlkp~NIll~~~~~~kL~DFG~a~ 240 (373)
T 3c1x_A 173 MKHGDLRNFIRNET-----HNPTVKDLIGFGLQVAKGMKFLASKK-------FVHRDLAARNCMLDEKFTVKVADFGLAR 240 (373)
T ss_dssp CTTCBHHHHHHCTT-----CCCBHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCCGGGEEECTTCCEEECCC----
T ss_pred CCCCCHHHHHhhcc-----cCCCHHHHHHHHHHHHHHHHHHHHCC-------EecCccchheEEECCCCCEEEeeccccc
Confidence 99999999997543 24788999999999999999999998 9999999999999999999999999998
Q ss_pred cccCc--------ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHHHHHHhhc
Q 047954 426 LVAQP--------IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREE 496 (582)
Q Consensus 426 ~~~~~--------~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~ 496 (582)
.+... ....+++.|+|||.+.+..++.++|||||||++|||+| |..||.... ..++...+.. .
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~----~~~~~~~~~~----~ 312 (373)
T 3c1x_A 241 DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN----TFDITVYLLQ----G 312 (373)
T ss_dssp -----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC----SSCHHHHHHT----T
T ss_pred cccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCC----HHHHHHHHHc----C
Confidence 65432 12234567999999998999999999999999999999 677775432 2223322211 1
Q ss_pred ccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCCC
Q 047954 497 WTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTES 552 (582)
Q Consensus 497 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 552 (582)
... ..+ ......+.+++.+||+.||++|||+.|++++|+.+.....
T Consensus 313 ~~~--~~p--------~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~ 358 (373)
T 3c1x_A 313 RRL--LQP--------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358 (373)
T ss_dssp CCC--CCC--------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred CCC--CCC--------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 110 000 0111257889999999999999999999999999876554
No 80
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=5.2e-41 Score=341.49 Aligned_cols=243 Identities=23% Similarity=0.323 Sum_probs=199.9
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCC---cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK---PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 348 (582)
.+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|+.+++.++||||+++++++.+....++||||+++
T Consensus 11 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~g 90 (318)
T 1fot_A 11 LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEG 90 (318)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCC
Confidence 467999999999999975 67889999986421 23456788999999999999999999999999999999999999
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccccc
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~ 428 (582)
|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 91 g~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~-------ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~ 157 (318)
T 1fot_A 91 GELFSLLRKSQ------RFPNPVAKFYAAEVCLALEYLHSKD-------IIYRDLKPENILLDKNGHIKITDFGFAKYVP 157 (318)
T ss_dssp CBHHHHHHHTS------SCCHHHHHHHHHHHHHHHHHHHTTT-------EECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred CCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------ccccCCChheEEEcCCCCEEEeecCcceecC
Confidence 99999997542 4788999999999999999999998 9999999999999999999999999998765
Q ss_pred Cc-ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccchhhh
Q 047954 429 QP-IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEIS 507 (582)
Q Consensus 429 ~~-~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 507 (582)
.. ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.... .... ......... .. .+
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~----~~~~---~~~i~~~~~--~~-p~--- 224 (318)
T 1fot_A 158 DVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN----TMKT---YEKILNAEL--RF-PP--- 224 (318)
T ss_dssp SCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS----HHHH---HHHHHHCCC--CC-CT---
T ss_pred CccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC----HHHH---HHHHHhCCC--CC-CC---
Confidence 43 23457899999999999999999999999999999999999996421 1112 222222111 00 00
Q ss_pred hhhchHHHHHHHHHHHHHcccCCCCCCC-----ChHHHHHHHhhc
Q 047954 508 VQRSAAHGMLKLLQVAIQCCNKSPEKRP-----EMAEVVSELEII 547 (582)
Q Consensus 508 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~~i 547 (582)
....++.+++.+||..||++|| +++|+++|.+.-
T Consensus 225 ------~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~ 263 (318)
T 1fot_A 225 ------FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFK 263 (318)
T ss_dssp ------TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGS
T ss_pred ------CCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCcccc
Confidence 0112577899999999999999 999999997753
No 81
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.2e-40 Score=333.79 Aligned_cols=248 Identities=24% Similarity=0.409 Sum_probs=194.8
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCCcch-------HHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEE
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKPLI-------TEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYK 344 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-------~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 344 (582)
.+.||+|+||.||+|... +++.||+|++....... .+.+.+|+.++++++||||+++++++.+.. ++|||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~e 101 (287)
T 4f0f_A 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVME 101 (287)
T ss_dssp EEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEEE
T ss_pred hhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eEEEE
Confidence 467999999999999974 67889999986432211 167899999999999999999999986554 79999
Q ss_pred eCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCc-----eEEe
Q 047954 345 FAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM-----VLVS 419 (582)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~-----~kl~ 419 (582)
|+++|+|.+++.... ..+++..++.++.|++.||+|||++++ +|+||||||+|||++.++. +||+
T Consensus 102 ~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~~~~-----~ivH~dikp~Nil~~~~~~~~~~~~kl~ 171 (287)
T 4f0f_A 102 FVPCGDLYHRLLDKA-----HPIKWSVKLRLMLDIALGIEYMQNQNP-----PIVHRDLRSPNIFLQSLDENAPVCAKVA 171 (287)
T ss_dssp CCTTCBHHHHHHCTT-----SCCCHHHHHHHHHHHHHHHHHHHTSSS-----CCBCSCCSGGGEEESCCCTTCSCCEEEC
T ss_pred ecCCCCHHHHHhccc-----CCccHHHHHHHHHHHHHHHHHHHhCCC-----CeecCCCCcceEEEeccCCCCceeEEeC
Confidence 999999999887543 258999999999999999999999863 4999999999999988776 9999
Q ss_pred eccccccccCc-ccccccccccCCCCCC--CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhc
Q 047954 420 DYGFSSLVAQP-IAAQRMISYKSPEYQS--SKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREE 496 (582)
Q Consensus 420 DfG~a~~~~~~-~~~~~~~~y~aPE~~~--~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 496 (582)
|||+++..... ....++..|+|||.+. ...++.++|||||||++|||++|+.||...... -...........
T Consensus 172 Dfg~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~ 246 (287)
T 4f0f_A 172 DFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG-----KIKFINMIREEG 246 (287)
T ss_dssp CCTTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCC-----HHHHHHHHHHSC
T ss_pred CCCccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccccc-----HHHHHHHHhccC
Confidence 99999865543 2345788999999983 456789999999999999999999999643211 111111111222
Q ss_pred ccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhc
Q 047954 497 WTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547 (582)
Q Consensus 497 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 547 (582)
..... .. ....++.+++.+||+.||++|||+.|+++.|+.+
T Consensus 247 ~~~~~-~~---------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 247 LRPTI-PE---------DCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp CCCCC-CT---------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred CCCCC-Cc---------ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 11111 11 1123578899999999999999999999999864
No 82
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2.2e-41 Score=346.93 Aligned_cols=256 Identities=22% Similarity=0.378 Sum_probs=203.4
Q ss_pred ccccccccCceEEEEEEEc--------CCceEEEEEecCCC-cchHHHHHHHHHHHhcC-CCCCccccceEEEeCCeeEE
Q 047954 272 PAEGLGKGIFGNSYKALLE--------GRAPVVVKRLRDLK-PLITEEFRKQLLVIADQ-KHPNLLPLLAYYFSNDEKLL 341 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 341 (582)
..+.||+|+||.||+|... ++..||||+++... ....+.+.+|+.+++++ +||||+++++++...+..++
T Consensus 39 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 118 (334)
T 2pvf_A 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 118 (334)
T ss_dssp EEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEE
T ss_pred EeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEE
Confidence 4578999999999999863 45679999997543 33456789999999999 99999999999999999999
Q ss_pred EEEeCCCCChHHHHhcCCCCC----------CCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeec
Q 047954 342 VYKFAGNGNLFNRIHGGKSSK----------NRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLD 411 (582)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~ 411 (582)
||||+++|+|.+++....... ....+++..++.++.||+.||+|||+.+ |+||||||+|||++
T Consensus 119 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-------ivH~Dlkp~NIll~ 191 (334)
T 2pvf_A 119 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-------CIHRDLAARNVLVT 191 (334)
T ss_dssp EEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCSGGGEEEC
T ss_pred EEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-------eeCCCCccceEEEc
Confidence 999999999999998654210 1124888999999999999999999998 99999999999999
Q ss_pred CCCceEEeeccccccccCc------ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccc
Q 047954 412 DNEMVLVSDYGFSSLVAQP------IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGAD 484 (582)
Q Consensus 412 ~~~~~kl~DfG~a~~~~~~------~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~ 484 (582)
.++.+||+|||+++..... ....+++.|+|||++.+..++.++|||||||++|||+| |+.||... ...+
T Consensus 192 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~----~~~~ 267 (334)
T 2pvf_A 192 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI----PVEE 267 (334)
T ss_dssp TTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC----CHHH
T ss_pred CCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcC----CHHH
Confidence 9999999999999876442 22335678999999988889999999999999999999 99999642 1222
Q ss_pred hHHHHHHHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCCC
Q 047954 485 LCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTES 552 (582)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 552 (582)
+...+ ......... .....++.+++.+||+.||++|||+.|++++|+.+.....
T Consensus 268 ~~~~~----~~~~~~~~~----------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~ 321 (334)
T 2pvf_A 268 LFKLL----KEGHRMDKP----------ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321 (334)
T ss_dssp HHHHH----HHTCCCCCC----------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HHHHH----hcCCCCCCC----------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccc
Confidence 22222 211111110 0112257889999999999999999999999999876544
No 83
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.3e-41 Score=345.50 Aligned_cols=250 Identities=24% Similarity=0.426 Sum_probs=196.5
Q ss_pred cccccccCceEEEEEEEcCC-----ceEEEEEecCCC-cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeC
Q 047954 273 AEGLGKGIFGNSYKALLEGR-----APVVVKRLRDLK-PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFA 346 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~~-----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 346 (582)
.+.||+|+||.||+|..... ..||||.++... ......+.+|+.++++++||||+++++++...+..++||||+
T Consensus 49 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 128 (333)
T 1mqb_A 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYM 128 (333)
T ss_dssp EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred ccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCC
Confidence 46799999999999986532 359999997543 334567899999999999999999999999999999999999
Q ss_pred CCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccc
Q 047954 347 GNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSL 426 (582)
Q Consensus 347 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~ 426 (582)
++|+|.+++..... .+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 129 ~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~-------ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 196 (333)
T 1mqb_A 129 ENGALDKFLREKDG-----EFSVLQLVGMLRGIAAGMKYLANMN-------YVHRDLAARNILVNSNLVCKVSDFGLSRV 196 (333)
T ss_dssp TTEEHHHHHHHTTT-----CSCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred CCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhCC-------eeCCCCChheEEECCCCcEEECCCCcchh
Confidence 99999999975432 4889999999999999999999998 99999999999999999999999999987
Q ss_pred ccCcc-------cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHHHHHHhhccc
Q 047954 427 VAQPI-------AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWT 498 (582)
Q Consensus 427 ~~~~~-------~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (582)
..... ...++..|+|||.+.+..++.++|||||||++|||++ |+.||... ...++.. .+.....
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~----~~~~~~~----~~~~~~~ 268 (333)
T 1mqb_A 197 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL----SNHEVMK----AINDGFR 268 (333)
T ss_dssp --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC----CHHHHHH----HHHTTCC
T ss_pred hccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccC----CHHHHHH----HHHCCCc
Confidence 64331 1224567999999988899999999999999999999 99999642 1122222 2222111
Q ss_pred ccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCCC
Q 047954 499 AEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTES 552 (582)
Q Consensus 499 ~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 552 (582)
... . ......+.+++.+||+.||++||++.+++++|+.+.....
T Consensus 269 ~~~-~---------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 312 (333)
T 1mqb_A 269 LPT-P---------MDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312 (333)
T ss_dssp CCC-C---------TTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred CCC-c---------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 110 0 0112257889999999999999999999999998875443
No 84
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=2.1e-41 Score=339.61 Aligned_cols=257 Identities=18% Similarity=0.312 Sum_probs=196.3
Q ss_pred cccccccCceEEEEEEEcCCceEEEEEecCCCc--chHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCC
Q 047954 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKP--LITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGN 350 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 350 (582)
.+.||+|+||.||+|...+++.||+|++..... ...+.+.+|+.++++++||||+++++++...+..++||||+++ +
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~ 85 (288)
T 1ob3_A 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-D 85 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-E
T ss_pred hhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-C
Confidence 367999999999999998889999999965432 2346788999999999999999999999999999999999975 9
Q ss_pred hHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccCc
Q 047954 351 LFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP 430 (582)
Q Consensus 351 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~~ 430 (582)
|.+++.... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 86 l~~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~-------i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 153 (288)
T 1ob3_A 86 LKKLLDVCE-----GGLESVTAKSFLLQLLNGIAYCHDRR-------VLHRDLKPQNLLINREGELKIADFGLARAFGIP 153 (288)
T ss_dssp HHHHHHTST-----TCCCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred HHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHCC-------eecCCCCHHHEEEcCCCCEEEeECccccccCcc
Confidence 999887542 24888999999999999999999998 999999999999999999999999999765432
Q ss_pred ----ccccccccccCCCCCCCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccc---c--
Q 047954 431 ----IAAQRMISYKSPEYQSSK-KISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTA---E-- 500 (582)
Q Consensus 431 ----~~~~~~~~y~aPE~~~~~-~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-- 500 (582)
....++..|+|||++.+. .++.++|||||||++|||+||+.||.... ..+....+.+........ .
T Consensus 154 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 229 (288)
T 1ob3_A 154 VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS----EADQLMRIFRILGTPNSKNWPNVT 229 (288)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS----HHHHHHHHHHHHCCCCTTTSTTGG
T ss_pred ccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHHHHCCCChhhchhhh
Confidence 223467889999998764 58999999999999999999999996432 222222222221110000 0
Q ss_pred ---ccchhhhh------hhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhh
Q 047954 501 ---IFDSEISV------QRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEI 546 (582)
Q Consensus 501 ---~~d~~~~~------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 546 (582)
..++.... .........++.+++.+||+.||++|||++|+++|.+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f 284 (288)
T 1ob3_A 230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284 (288)
T ss_dssp GSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGG
T ss_pred cccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcch
Confidence 00000000 00001112357789999999999999999999998764
No 85
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2.8e-41 Score=352.63 Aligned_cols=250 Identities=18% Similarity=0.297 Sum_probs=196.1
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCC---cchHHHHHHHHHHHhcC-CCCCccccceEEEeCCeeEEEEEeCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK---PLITEEFRKQLLVIADQ-KHPNLLPLLAYYFSNDEKLLVYKFAG 347 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~ 347 (582)
.+.||+|+||+||+|+.. +++.||+|+++... ....+.+..|..++.++ +|||||++++++.+.+..++||||++
T Consensus 57 ~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~ 136 (396)
T 4dc2_A 57 LRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 136 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCC
Confidence 468999999999999976 46789999986432 22234578899999886 89999999999999999999999999
Q ss_pred CCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccc
Q 047954 348 NGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV 427 (582)
Q Consensus 348 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~ 427 (582)
+|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 137 gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~LH~~g-------ivHrDLKp~NILl~~~g~ikL~DFGla~~~ 203 (396)
T 4dc2_A 137 GGDLMFHMQRQR------KLPEEHARFYSAEISLALNYLHERG-------IIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 203 (396)
T ss_dssp TCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHTT-------CBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred CCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------EEeccCCHHHEEECCCCCEEEeecceeeec
Confidence 999999997532 4889999999999999999999998 999999999999999999999999999863
Q ss_pred cC----cccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCC-ccchHHHHHHHHhhccccccc
Q 047954 428 AQ----PIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGIN-GADLCSWVLRAVREEWTAEIF 502 (582)
Q Consensus 428 ~~----~~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 502 (582)
.. .....+|+.|+|||++.+..++.++|||||||++|||++|+.||........ .......+...+..... .+
T Consensus 204 ~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~-~~- 281 (396)
T 4dc2_A 204 LRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-RI- 281 (396)
T ss_dssp CCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC-CC-
T ss_pred ccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc-CC-
Confidence 22 2234578999999999999999999999999999999999999964321111 11112222222222111 00
Q ss_pred chhhhhhhchHHHHHHHHHHHHHcccCCCCCCCCh------HHHHHHHhh
Q 047954 503 DSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEM------AEVVSELEI 546 (582)
Q Consensus 503 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~------~evl~~L~~ 546 (582)
.. ....++.+|+.+||+.||++||++ .||++|.+.
T Consensus 282 p~---------~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff 322 (396)
T 4dc2_A 282 PR---------SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 322 (396)
T ss_dssp CT---------TSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTT
T ss_pred CC---------cCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccc
Confidence 00 111257789999999999999985 789888764
No 86
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=2.9e-41 Score=342.35 Aligned_cols=254 Identities=23% Similarity=0.393 Sum_probs=203.4
Q ss_pred ccccccccCceEEEEEEE------cCCceEEEEEecCCCc-chHHHHHHHHHHHhcC-CCCCccccceEEEeCCeeEEEE
Q 047954 272 PAEGLGKGIFGNSYKALL------EGRAPVVVKRLRDLKP-LITEEFRKQLLVIADQ-KHPNLLPLLAYYFSNDEKLLVY 343 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 343 (582)
..+.||+|+||.||+|.. .++..||||+++.... ...+.+.+|+.++.++ +||||+++++++...+..++||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 106 (313)
T 1t46_A 27 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVIT 106 (313)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEE
Confidence 457899999999999985 3457899999975432 3457799999999999 9999999999999999999999
Q ss_pred EeCCCCChHHHHhcCCCC------------CCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeec
Q 047954 344 KFAGNGNLFNRIHGGKSS------------KNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLD 411 (582)
Q Consensus 344 e~~~~gsL~~~l~~~~~~------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~ 411 (582)
||+++|+|.+++...... .....+++..++.++.||+.||+|||+++ |+||||||+|||++
T Consensus 107 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-------i~H~dlkp~Nil~~ 179 (313)
T 1t46_A 107 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN-------CIHRDLAARNILLT 179 (313)
T ss_dssp ECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCSGGGEEEE
T ss_pred ecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC-------eecCCCccceEEEc
Confidence 999999999999865421 11225889999999999999999999998 99999999999999
Q ss_pred CCCceEEeeccccccccCcc------cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccc
Q 047954 412 DNEMVLVSDYGFSSLVAQPI------AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGAD 484 (582)
Q Consensus 412 ~~~~~kl~DfG~a~~~~~~~------~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~ 484 (582)
.++.+||+|||+++...... ...++..|+|||.+.+..++.++||||||+++|||+| |+.||..... ...
T Consensus 180 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~---~~~ 256 (313)
T 1t46_A 180 HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV---DSK 256 (313)
T ss_dssp TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS---SHH
T ss_pred CCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccc---hhH
Confidence 99999999999998765432 2234567999999988899999999999999999999 9999965321 111
Q ss_pred hHHHHHHHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhccc
Q 047954 485 LCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKV 549 (582)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 549 (582)
............ ... ....++.+++.+||+.||++|||+.|++++|+.+..
T Consensus 257 ----~~~~~~~~~~~~-~~~---------~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 307 (313)
T 1t46_A 257 ----FYKMIKEGFRML-SPE---------HAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307 (313)
T ss_dssp ----HHHHHHHTCCCC-CCT---------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----HHHHhccCCCCC-Ccc---------cCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 112222211111 011 112357889999999999999999999999998764
No 87
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=3.6e-41 Score=341.96 Aligned_cols=253 Identities=22% Similarity=0.357 Sum_probs=193.0
Q ss_pred ccccccccCceEEEEEEEcC----CceEEEEEecCCC--cchHHHHHHHHHHHhcCCCCCccccceEEEeCCe-----eE
Q 047954 272 PAEGLGKGIFGNSYKALLEG----RAPVVVKRLRDLK--PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDE-----KL 340 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~-----~~ 340 (582)
..+.||+|+||.||+|.... +..||+|.++... ....+.+.+|+.++++++||||+++++++..... .+
T Consensus 38 ~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 117 (313)
T 3brb_A 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPM 117 (313)
T ss_dssp EEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEE
T ss_pred eccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccE
Confidence 45789999999999998643 3479999986442 3345678999999999999999999999987653 49
Q ss_pred EEEEeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEee
Q 047954 341 LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSD 420 (582)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~D 420 (582)
+||||+++|+|.+++...........+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|
T Consensus 118 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-------ivH~dikp~NIli~~~~~~kl~D 190 (313)
T 3brb_A 118 VILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN-------FLHRDLAARNCMLRDDMTVCVAD 190 (313)
T ss_dssp EEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT-------CCCCCCSGGGEEECTTSCEEECS
T ss_pred EEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC-------cccCCCCcceEEEcCCCcEEEee
Confidence 99999999999999965443333346899999999999999999999998 99999999999999999999999
Q ss_pred ccccccccCc------ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHHHHHH
Q 047954 421 YGFSSLVAQP------IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAV 493 (582)
Q Consensus 421 fG~a~~~~~~------~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~ 493 (582)
||+++..... ....++..|+|||.+.+..++.++||||||+++|||++ |+.||.... ...+...+..
T Consensus 191 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~----~~~~~~~~~~-- 264 (313)
T 3brb_A 191 FGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQ----NHEMYDYLLH-- 264 (313)
T ss_dssp CSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC----GGGHHHHHHT--
T ss_pred cCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCC----HHHHHHHHHc--
Confidence 9999876432 22335678999999999999999999999999999999 888986432 2222222211
Q ss_pred hhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhccc
Q 047954 494 REEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKV 549 (582)
Q Consensus 494 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 549 (582)
....... .....++.+++.+||+.||++|||+.+++++|+.+..
T Consensus 265 --~~~~~~~----------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~ 308 (313)
T 3brb_A 265 --GHRLKQP----------EDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308 (313)
T ss_dssp --TCCCCCB----------TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --CCCCCCC----------ccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1111110 0112257889999999999999999999999998864
No 88
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-40 Score=341.66 Aligned_cols=261 Identities=19% Similarity=0.280 Sum_probs=195.3
Q ss_pred cccccccCceEEEEEEEcCCceEEEEEecCCCcchHHHHHHHHHHHhc--CCCCCccccceEEEeC----CeeEEEEEeC
Q 047954 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIAD--QKHPNLLPLLAYYFSN----DEKLLVYKFA 346 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~~~~~~~----~~~~lv~e~~ 346 (582)
.+.||+|+||.||+|+.. +..||||++... ....+..|.+++.. ++||||+++++++... ...++||||+
T Consensus 42 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 117 (337)
T 3mdy_A 42 VKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYH 117 (337)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCC
T ss_pred EeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEecc
Confidence 578999999999999876 788999998542 33445556666555 4999999999999987 6789999999
Q ss_pred CCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCC-CCCCcceecCCCCCCeeecCCCceEEeeccccc
Q 047954 347 GNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKS-RTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSS 425 (582)
Q Consensus 347 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~ 425 (582)
++|+|.+++... .+++..++.++.|++.||+|||+.... ....+|+||||||+|||++.++.+||+|||+++
T Consensus 118 ~~g~L~~~l~~~-------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~ 190 (337)
T 3mdy_A 118 ENGSLYDYLKST-------TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 190 (337)
T ss_dssp TTCBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred CCCcHHHHhhcc-------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCce
Confidence 999999999643 488999999999999999999988100 000129999999999999999999999999997
Q ss_pred cccCcc--------cccccccccCCCCCCCCCCCcc------hhHHHHHHHHHHHHhC----------CCCCCCCCCCCC
Q 047954 426 LVAQPI--------AAQRMISYKSPEYQSSKKISRK------SDVWSFGCLLLELLTG----------RISTHSAPQGIN 481 (582)
Q Consensus 426 ~~~~~~--------~~~~~~~y~aPE~~~~~~~~~k------~DVwS~Gvvl~elltG----------~~P~~~~~~~~~ 481 (582)
.+.... ...++..|+|||++.+..++.+ +|||||||++|||+|| +.||......
T Consensus 191 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~-- 268 (337)
T 3mdy_A 191 KFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPS-- 268 (337)
T ss_dssp ECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS--
T ss_pred eeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCC--
Confidence 654322 2357889999999987766665 9999999999999999 5666433221
Q ss_pred ccchHHHHHHHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCC
Q 047954 482 GADLCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTE 551 (582)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 551 (582)
.................. .............++.+++.+||+.||++|||+.||+++|+.+....
T Consensus 269 -~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 269 -DPSYEDMREIVCIKKLRP----SFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp -SCCHHHHHHHHTTSCCCC----CCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred -CCchhhhHHHHhhhccCc----cccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 111122222222111111 11111122345567899999999999999999999999999987654
No 89
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=8.8e-42 Score=371.61 Aligned_cols=250 Identities=26% Similarity=0.413 Sum_probs=204.0
Q ss_pred ccccccccCceEEEEEEEcCCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCCh
Q 047954 272 PAEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNL 351 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 351 (582)
..+.||+|+||.||+|.+.++..||||+++... ...+.|.+|+.+|++++|||||++++++.. +..++||||+.+|+|
T Consensus 271 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL 348 (535)
T 2h8h_A 271 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL 348 (535)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEH
T ss_pred hheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcH
Confidence 357899999999999999988889999997543 346789999999999999999999999866 678999999999999
Q ss_pred HHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccCcc
Q 047954 352 FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI 431 (582)
Q Consensus 352 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~~~ 431 (582)
.+++..... ..+++..++.|+.||+.||+|||+++ ||||||||+|||++.++.+||+|||+++......
T Consensus 349 ~~~l~~~~~----~~l~~~~~~~i~~qi~~~L~~LH~~~-------ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 417 (535)
T 2h8h_A 349 LDFLKGETG----KYLRLPQLVDMAAQIASGMAYVERMN-------YVHRDLRAANILVGENLVCKVADFGLARLIEDNE 417 (535)
T ss_dssp HHHHSHHHH----TTCCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH
T ss_pred HHHHhhcCC----CCCCHHHHHHHHHHHHHHHHHHHhCC-------eeCCCCCHhhEEEcCCCcEEEcccccceecCCCc
Confidence 999964321 24788999999999999999999998 9999999999999999999999999998765431
Q ss_pred -----cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHHHHHHhhcccccccchh
Q 047954 432 -----AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSE 505 (582)
Q Consensus 432 -----~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 505 (582)
...++..|+|||.+.+..++.++|||||||++|||+| |+.||... ...++...+ .........
T Consensus 418 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~----~~~~~~~~i----~~~~~~~~~--- 486 (535)
T 2h8h_A 418 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM----VNREVLDQV----ERGYRMPCP--- 486 (535)
T ss_dssp HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTC----CHHHHHHHH----HTTCCCCCC---
T ss_pred eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----CHHHHHHHH----HcCCCCCCC---
Confidence 2334578999999988899999999999999999999 99999642 222222222 222111110
Q ss_pred hhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCCC
Q 047954 506 ISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTES 552 (582)
Q Consensus 506 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 552 (582)
......+.+|+.+||+.||++|||+++|++.|+.+.....
T Consensus 487 -------~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~ 526 (535)
T 2h8h_A 487 -------PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 526 (535)
T ss_dssp -------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCS
T ss_pred -------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccC
Confidence 1112357889999999999999999999999998875444
No 90
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.6e-41 Score=342.89 Aligned_cols=240 Identities=18% Similarity=0.193 Sum_probs=188.8
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCCc--chHHHHHHHHHHHhcC-CCCCccccceEEEeCCeeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKP--LITEEFRKQLLVIADQ-KHPNLLPLLAYYFSNDEKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 348 (582)
.+.||+|+||+||+|... +++.||||++..... .....+..|+..+.++ +||||++++++|.+.+..++||||+ +
T Consensus 62 ~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~ 140 (311)
T 3p1a_A 62 LSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-G 140 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-C
T ss_pred eheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-C
Confidence 467999999999999976 688999999865332 2334455666666554 9999999999999999999999999 7
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccccc
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~ 428 (582)
++|.+++.... ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 141 ~~L~~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~-------ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~ 208 (311)
T 3p1a_A 141 PSLQQHCEAWG-----ASLPEAQVWGYLRDTLLALAHLHSQG-------LVHLDVKPANIFLGPRGRCKLGDFGLLVELG 208 (311)
T ss_dssp CBHHHHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred CCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCC-------EecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence 79999887543 24899999999999999999999998 9999999999999999999999999987765
Q ss_pred Cc---ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccchh
Q 047954 429 QP---IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSE 505 (582)
Q Consensus 429 ~~---~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 505 (582)
.. ....+|+.|+|||++.+ .++.++|||||||++|||++|..|+... .. ...+.... ..+.
T Consensus 209 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~------~~-----~~~~~~~~----~~~~ 272 (311)
T 3p1a_A 209 TAGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG------EG-----WQQLRQGY----LPPE 272 (311)
T ss_dssp ------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH------HH-----HHHHTTTC----CCHH
T ss_pred cCCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc------cH-----HHHHhccC----CCcc
Confidence 43 23347889999998876 7999999999999999999997766421 11 11111111 1111
Q ss_pred hhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhh
Q 047954 506 ISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEI 546 (582)
Q Consensus 506 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 546 (582)
+. .....++.+++.+||+.||++|||++|++++.|.
T Consensus 273 ~~-----~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~ 308 (311)
T 3p1a_A 273 FT-----AGLSSELRSVLVMMLEPDPKLRATAEALLALPVL 308 (311)
T ss_dssp HH-----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGG
T ss_pred cc-----cCCCHHHHHHHHHHcCCChhhCcCHHHHHhCccc
Confidence 11 0112368889999999999999999999998764
No 91
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.2e-41 Score=347.82 Aligned_cols=260 Identities=23% Similarity=0.353 Sum_probs=200.8
Q ss_pred cccccccCceEEEEEEE-----cCCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEe--CCeeEEEEEe
Q 047954 273 AEGLGKGIFGNSYKALL-----EGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS--NDEKLLVYKF 345 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~--~~~~~lv~e~ 345 (582)
.+.||+|+||.||+|++ .++..||||++........+.+.+|++++++++||||+++++++.. ....++||||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 107 (327)
T 3lxl_A 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEY 107 (327)
T ss_dssp EEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEEC
T ss_pred hhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEee
Confidence 46899999999999984 4578899999987666667789999999999999999999999884 4568899999
Q ss_pred CCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccc
Q 047954 346 AGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSS 425 (582)
Q Consensus 346 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~ 425 (582)
+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 108 ~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~-------ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 175 (327)
T 3lxl_A 108 LPSGCLRDFLQRHR-----ARLDASRLLLYSSQICKGMEYLGSRR-------CVHRDLAARNILVESEAHVKIADFGLAK 175 (327)
T ss_dssp CTTCBHHHHHHHHG-----GGCCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCSGGGEEEEETTEEEECCGGGCE
T ss_pred cCCCCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHhCC-------ccCCCCChhhEEECCCCCEEEcccccce
Confidence 99999999997532 24889999999999999999999998 9999999999999999999999999998
Q ss_pred cccCcc-------cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCC-------CCccchHHHHHH
Q 047954 426 LVAQPI-------AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQG-------INGADLCSWVLR 491 (582)
Q Consensus 426 ~~~~~~-------~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~-------~~~~~~~~~~~~ 491 (582)
...... ...++..|+|||.+.+..++.++||||||+++|||++|+.||...... .........+..
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (327)
T 3lxl_A 176 LLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLE 255 (327)
T ss_dssp ECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHH
T ss_pred ecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHH
Confidence 764322 233566799999998888999999999999999999999998532110 000000111111
Q ss_pred HHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCCCCc
Q 047954 492 AVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTESTE 554 (582)
Q Consensus 492 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 554 (582)
.......... .......+.+++.+||+.||++|||+.|++++|+.+.......
T Consensus 256 ~~~~~~~~~~----------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~ 308 (327)
T 3lxl_A 256 LLEEGQRLPA----------PPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGC 308 (327)
T ss_dssp HHHTTCCCCC----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-------
T ss_pred HhhcccCCCC----------CCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcCc
Confidence 1111111100 1112236788999999999999999999999999887655433
No 92
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.5e-41 Score=373.39 Aligned_cols=245 Identities=23% Similarity=0.381 Sum_probs=198.1
Q ss_pred cccccCceEEEEEEEc---CCceEEEEEecCCC-cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCC
Q 047954 275 GLGKGIFGNSYKALLE---GRAPVVVKRLRDLK-PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGN 350 (582)
Q Consensus 275 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 350 (582)
.||+|+||.||+|.+. ++..||||+++... ....+.|.+|+++|++++|||||+++++|.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 6999999999999864 45679999997543 3456889999999999999999999999976 56899999999999
Q ss_pred hHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccCc
Q 047954 351 LFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP 430 (582)
Q Consensus 351 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~~ 430 (582)
|.+++.... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.+...
T Consensus 422 L~~~l~~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~~-------iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~ 489 (613)
T 2ozo_A 422 LHKFLVGKR-----EEIPVSNVAELLHQVSMGMKYLEEKN-------FVHRNLAARNVLLVNRHYAKISDFGLSKALGAD 489 (613)
T ss_dssp HHHHHTTCT-----TTSCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCSGGGEEEEETTEEEECCCSTTTTCC--
T ss_pred HHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC-------EEcCcCCHHHEEEcCCCcEEEeeccCcccccCC
Confidence 999996432 25899999999999999999999998 999999999999999999999999999876433
Q ss_pred c-------cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHHHHHHhhccccccc
Q 047954 431 I-------AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAEIF 502 (582)
Q Consensus 431 ~-------~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (582)
. ...+++.|+|||++.+..++.++|||||||++|||+| |+.||... ...++...+. .+......
T Consensus 490 ~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~----~~~~~~~~i~----~~~~~~~p 561 (613)
T 2ozo_A 490 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM----KGPEVMAFIE----QGKRMECP 561 (613)
T ss_dssp ------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC----CSHHHHHHHH----TTCCCCCC
T ss_pred CceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC----CHHHHHHHHH----cCCCCCCC
Confidence 2 1223468999999998899999999999999999998 99999643 2233333222 22111111
Q ss_pred chhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccC
Q 047954 503 DSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVT 550 (582)
Q Consensus 503 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 550 (582)
.....++.+|+.+||+.||++||++.+|++.|+.+...
T Consensus 562 ----------~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 599 (613)
T 2ozo_A 562 ----------PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 599 (613)
T ss_dssp ----------TTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred ----------CcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 11123688899999999999999999999999887543
No 93
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=7.6e-41 Score=351.23 Aligned_cols=249 Identities=20% Similarity=0.335 Sum_probs=191.6
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCCcchHHHHHHHHHHHh-cCCCCCccccceEEEe----CCeeEEEEEeC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKPLITEEFRKQLLVIA-DQKHPNLLPLLAYYFS----NDEKLLVYKFA 346 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~-~l~H~niv~l~~~~~~----~~~~~lv~e~~ 346 (582)
.+.||+|+||+||+|... ++..||||++.. ...+.+|+.++. ..+||||+++++++.. ....++||||+
T Consensus 67 ~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~ 141 (400)
T 1nxk_A 67 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL 141 (400)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred cceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeC
Confidence 357999999999999965 578899999863 245678888874 4589999999999876 55689999999
Q ss_pred CCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecC---CCceEEeeccc
Q 047954 347 GNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDD---NEMVLVSDYGF 423 (582)
Q Consensus 347 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~---~~~~kl~DfG~ 423 (582)
++|+|.+++..... ..+++..+..|+.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||+
T Consensus 142 ~gg~L~~~l~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~-------ivHrDlkp~Nill~~~~~~~~~kl~DFG~ 210 (400)
T 1nxk_A 142 DGGELFSRIQDRGD----QAFTEREASEIMKSIGEAIQYLHSIN-------IAHRDVKPENLLYTSKRPNAILKLTDFGF 210 (400)
T ss_dssp CSEEHHHHHHCC-------CCBHHHHHHHHHHHHHHHHHHHHTT-------EECCCCCGGGEEESSSSTTCCEEECCCTT
T ss_pred CCCcHHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHHCC-------ccccCcCcceEEEecCCCCccEEEEeccc
Confidence 99999999975432 25899999999999999999999998 999999999999997 78899999999
Q ss_pred cccccCc---ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhccccc
Q 047954 424 SSLVAQP---IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAE 500 (582)
Q Consensus 424 a~~~~~~---~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (582)
++..... ....+|..|+|||++.+..++.++|||||||++|||++|+.||...............+.. ..+.
T Consensus 211 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~---~~~~-- 285 (400)
T 1nxk_A 211 AKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM---GQYE-- 285 (400)
T ss_dssp CEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHH---TCCC--
T ss_pred ccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHc---Cccc--
Confidence 9876533 2334688899999999999999999999999999999999999754322111122222211 1110
Q ss_pred ccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 501 IFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 501 ~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
...+. ......++.+|+.+||+.||++|||+.|+++|.|...
T Consensus 286 ~~~~~------~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~ 327 (400)
T 1nxk_A 286 FPNPE------WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 327 (400)
T ss_dssp CCTTT------TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHT
T ss_pred CCCcc------cccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccC
Confidence 00000 0011235788999999999999999999999988654
No 94
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=4.5e-41 Score=348.33 Aligned_cols=250 Identities=20% Similarity=0.332 Sum_probs=192.6
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCCh
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNL 351 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 351 (582)
.+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|+.++++++||||+++++++...+..++||||+++|+|
T Consensus 25 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L 103 (361)
T 3uc3_A 25 VKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGEL 103 (361)
T ss_dssp EEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred EEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCH
Confidence 467999999999999976 67889999996543 2346788999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCc--eEEeeccccccccC
Q 047954 352 FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM--VLVSDYGFSSLVAQ 429 (582)
Q Consensus 352 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~--~kl~DfG~a~~~~~ 429 (582)
.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++. +||+|||+++....
T Consensus 104 ~~~l~~~~------~~~~~~~~~i~~ql~~~L~~LH~~~-------ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~ 170 (361)
T 3uc3_A 104 YERICNAG------RFSEDEARFFFQQLLSGVSYCHSMQ-------ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 170 (361)
T ss_dssp HHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHTT-------CCSCCCCGGGEEECSSSSCCEEECCCCCC-----
T ss_pred HHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------cccCCCCHHHEEEcCCCCceEEEeecCccccccc
Confidence 99986432 4889999999999999999999998 999999999999987765 99999999975432
Q ss_pred c---ccccccccccCCCCCCCCCCCcc-hhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccchh
Q 047954 430 P---IAAQRMISYKSPEYQSSKKISRK-SDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSE 505 (582)
Q Consensus 430 ~---~~~~~~~~y~aPE~~~~~~~~~k-~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 505 (582)
. ....+|+.|+|||++.+..++.+ +|||||||++|||++|+.||...... ......+......... ..+ .
T Consensus 171 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~~~~~~~~~~~~~~--~~~-~ 244 (361)
T 3uc3_A 171 HSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEP---RDYRKTIQRILSVKYS--IPD-D 244 (361)
T ss_dssp ----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----C---CCHHHHHHHHHTTCCC--CCT-T
T ss_pred cCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccH---HHHHHHHHHHhcCCCC--CCC-c
Confidence 2 33457889999999988777655 89999999999999999999754321 2222222222222111 000 0
Q ss_pred hhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhccc
Q 047954 506 ISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKV 549 (582)
Q Consensus 506 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 549 (582)
. ....++.+|+.+||+.||++|||+.|+++|.|..+.
T Consensus 245 ~-------~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~ 281 (361)
T 3uc3_A 245 I-------RISPECCHLISRIFVADPATRISIPEIKTHSWFLKN 281 (361)
T ss_dssp S-------CCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTT
T ss_pred C-------CCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhcC
Confidence 0 011257789999999999999999999999887553
No 95
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.6e-41 Score=350.04 Aligned_cols=242 Identities=23% Similarity=0.295 Sum_probs=195.5
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCC---CcchHHHHHHHHHHHhcC-CCCCccccceEEEeCCeeEEEEEeCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDL---KPLITEEFRKQLLVIADQ-KHPNLLPLLAYYFSNDEKLLVYKFAG 347 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~ 347 (582)
.+.||+|+||+||+|+.. +++.||||+++.. .....+.+.+|..++.++ +||||+++++++.+.+..++||||++
T Consensus 28 ~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~ 107 (353)
T 3txo_A 28 IRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVN 107 (353)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCC
Confidence 467999999999999965 5788999998642 223456688899999988 79999999999999999999999999
Q ss_pred CCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccc
Q 047954 348 NGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV 427 (582)
Q Consensus 348 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~ 427 (582)
+|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 108 gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~g-------ivHrDlkp~NILl~~~g~ikL~DFG~a~~~ 174 (353)
T 3txo_A 108 GGDLMFHIQKSR------RFDEARARFYAAEIISALMFLHDKG-------IIYRDLKLDNVLLDHEGHCKLADFGMCKEG 174 (353)
T ss_dssp SCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHTT-------CBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred CCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------CcccCCCHHHEEECCCCCEEEccccceeec
Confidence 999999997542 4889999999999999999999998 999999999999999999999999999864
Q ss_pred cCc----ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccc
Q 047954 428 AQP----IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFD 503 (582)
Q Consensus 428 ~~~----~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 503 (582)
... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||... ...++...+ ...... +.
T Consensus 175 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~----~~~~~~~~i---~~~~~~---~p 244 (353)
T 3txo_A 175 ICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE----NEDDLFEAI---LNDEVV---YP 244 (353)
T ss_dssp CC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCS----SHHHHHHHH---HHCCCC---CC
T ss_pred ccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCC----CHHHHHHHH---HcCCCC---CC
Confidence 322 2345788999999998888999999999999999999999999643 222222222 111110 00
Q ss_pred hhhhhhhchHHHHHHHHHHHHHcccCCCCCCCCh------HHHHHHHhh
Q 047954 504 SEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEM------AEVVSELEI 546 (582)
Q Consensus 504 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~------~evl~~L~~ 546 (582)
.. ....+.+++.+||+.||++||++ +|+++|.+.
T Consensus 245 ~~---------~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f 284 (353)
T 3txo_A 245 TW---------LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFF 284 (353)
T ss_dssp TT---------SCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGG
T ss_pred CC---------CCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcc
Confidence 00 11257789999999999999999 889988764
No 96
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=6.1e-41 Score=341.14 Aligned_cols=264 Identities=16% Similarity=0.303 Sum_probs=193.0
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCC-cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK-PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGN 350 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 350 (582)
.+.||+|+||.||+|... ++..||+|+++... ....+.+.+|+.++++++||||+++++++...+..++||||++ |+
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~ 88 (317)
T 2pmi_A 10 LEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-ND 88 (317)
T ss_dssp ---------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-CB
T ss_pred eeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-CC
Confidence 367999999999999864 57889999986432 2344678899999999999999999999999999999999997 69
Q ss_pred hHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccCc
Q 047954 351 LFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP 430 (582)
Q Consensus 351 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~~ 430 (582)
|.+++...........+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 89 L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~-------ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 161 (317)
T 2pmi_A 89 LKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK-------ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP 161 (317)
T ss_dssp HHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCCGGGEEECTTCCEEECCCSSCEETTSC
T ss_pred HHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-------eeeCCCChHHeEEcCCCCEEECcCccceecCCC
Confidence 9998875432222335888999999999999999999998 999999999999999999999999999876432
Q ss_pred ----ccccccccccCCCCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhc---ccccc-
Q 047954 431 ----IAAQRMISYKSPEYQSS-KKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREE---WTAEI- 501 (582)
Q Consensus 431 ----~~~~~~~~y~aPE~~~~-~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~- 501 (582)
....++..|+|||++.+ ..++.++|||||||++|||+||+.||.... ..+....+....... ....+
T Consensus 162 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~----~~~~~~~i~~~~~~~~~~~~~~~~ 237 (317)
T 2pmi_A 162 VNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTN----DEEQLKLIFDIMGTPNESLWPSVT 237 (317)
T ss_dssp CCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS----HHHHHHHHHHHHCSCCTTTCGGGG
T ss_pred cccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC----hHHHHHHHHHHhCCCChhHhhhhh
Confidence 23346788999999876 468999999999999999999999996432 222222222221110 00000
Q ss_pred ----cchhhh-----------hhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 502 ----FDSEIS-----------VQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 502 ----~d~~~~-----------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
..+.+. ..........++.+++.+||+.||++|||+.|+++|.+...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~ 299 (317)
T 2pmi_A 238 KLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAE 299 (317)
T ss_dssp GCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGG
T ss_pred hhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhc
Confidence 000000 00000011236889999999999999999999999877544
No 97
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.2e-41 Score=345.46 Aligned_cols=246 Identities=25% Similarity=0.330 Sum_probs=189.9
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCCC---cchHHHHHHHHHHHhcCCCCCccccceEEEeCCe----eEEEEE
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDLK---PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDE----KLLVYK 344 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~----~~lv~e 344 (582)
.+.||+|+||.||+|.. .+++.||||+++... ....+.+.+|+.++.+++||||+++++++..... .++|||
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e 96 (311)
T 3ork_A 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVME 96 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEe
Confidence 46799999999999996 567889999997542 2334578899999999999999999999887553 399999
Q ss_pred eCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccc
Q 047954 345 FAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS 424 (582)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a 424 (582)
|+++|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 97 ~~~g~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~-------ivH~dlkp~Nil~~~~~~~kl~Dfg~a 163 (311)
T 3ork_A 97 YVDGVTLRDIVHTEG------PMTPKRAIEVIADACQALNFSHQNG-------IIHRDVKPANIMISATNAVKVMDFGIA 163 (311)
T ss_dssp CCCEEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHTT-------CCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred cCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------CCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence 999999999997532 4889999999999999999999998 999999999999999999999999999
Q ss_pred ccccCcc-------cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcc
Q 047954 425 SLVAQPI-------AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEW 497 (582)
Q Consensus 425 ~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (582)
+.+.... ...++..|+|||.+.+..++.++|||||||++|||+||+.||.... .............
T Consensus 164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~-------~~~~~~~~~~~~~ 236 (311)
T 3ork_A 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS-------PVSVAYQHVREDP 236 (311)
T ss_dssp ------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-------HHHHHHHHHHCCC
T ss_pred ccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC-------hHHHHHHHhcCCC
Confidence 8764321 2336889999999999999999999999999999999999996422 1111222222111
Q ss_pred cccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhh
Q 047954 498 TAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEI 546 (582)
Q Consensus 498 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 546 (582)
.. +... ......++.+++.+||+.||++||++.+++.+.+.
T Consensus 237 ~~----~~~~----~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~ 277 (311)
T 3ork_A 237 IP----PSAR----HEGLSADLDAVVLKALAKNPENRYQTAAEMRADLV 277 (311)
T ss_dssp CC----HHHH----STTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred CC----cccc----cCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHH
Confidence 11 0000 00112357889999999999999988887766543
No 98
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.8e-41 Score=346.37 Aligned_cols=246 Identities=22% Similarity=0.322 Sum_probs=194.2
Q ss_pred cccccccCceEEEEEEEcC-Cce----EEEEEecCCC-cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeC
Q 047954 273 AEGLGKGIFGNSYKALLEG-RAP----VVVKRLRDLK-PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFA 346 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~-~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 346 (582)
.+.||+|+||.||+|.... +.. ||+|.+.... ....+.+.+|+.++++++||||+++++++. .+..++||||+
T Consensus 18 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~ 96 (325)
T 3kex_A 18 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYL 96 (325)
T ss_dssp EEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEECC
T ss_pred eeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEeC
Confidence 4679999999999999643 443 7788775332 223356788999999999999999999885 56689999999
Q ss_pred CCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccc
Q 047954 347 GNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSL 426 (582)
Q Consensus 347 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~ 426 (582)
.+|+|.+++.... ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 97 ~~~~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~-------ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 164 (325)
T 3kex_A 97 PLGSLLDHVRQHR-----GALGPQLLLNWGVQIAKGMYYLEEHG-------MVHRNLAARNVLLKSPSQVQVADFGVADL 164 (325)
T ss_dssp TTCBSHHHHHSSG-----GGSCTTHHHHHHHHHHHHHHHHHHTT-------CCCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred CCCCHHHHHHHcc-----ccCCHHHHHHHHHHHHHHHHHHHhCC-------CCCCccchheEEECCCCeEEECCCCcccc
Confidence 9999999997542 25888999999999999999999998 99999999999999999999999999987
Q ss_pred ccCcc------cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHHHHHHhhcccc
Q 047954 427 VAQPI------AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTA 499 (582)
Q Consensus 427 ~~~~~------~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (582)
+.... ...++..|+|||.+.+..++.++|||||||++|||+| |+.||.... ...+...+. .....
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~----~~~~~~~~~----~~~~~ 236 (325)
T 3kex_A 165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLR----LAEVPDLLE----KGERL 236 (325)
T ss_dssp SCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC----TTHHHHHHH----TTCBC
T ss_pred cCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccC----HHHHHHHHH----cCCCC
Confidence 64432 2235568999999998899999999999999999999 999996532 122222221 11111
Q ss_pred cccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhccc
Q 047954 500 EIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKV 549 (582)
Q Consensus 500 ~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 549 (582)
.... . ...++.+++.+||+.||++|||+.|++++|+.+..
T Consensus 237 ~~~~-~---------~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 237 AQPQ-I---------CTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp CCCT-T---------BCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred CCCC-c---------CcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 0000 0 11146789999999999999999999999998864
No 99
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2e-41 Score=346.80 Aligned_cols=243 Identities=21% Similarity=0.299 Sum_probs=196.6
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCCC---cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDLK---PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 348 (582)
.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+.++++++||||+++++++...+..++||||+ +
T Consensus 14 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~ 92 (336)
T 3h4j_B 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-G 92 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-C
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-C
Confidence 46799999999999996 567899999985321 122357889999999999999999999999999999999999 7
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccccc
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~ 428 (582)
|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 93 g~l~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH~~g-------ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~ 159 (336)
T 3h4j_B 93 GELFDYIVEKK------RMTEDEGRRFFQQIICAIEYCHRHK-------IVHRDLKPENLLLDDNLNVKIADFGLSNIMT 159 (336)
T ss_dssp EEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHHT-------CCCCCCSTTTEEECTTCCEEECCSSCTBTTT
T ss_pred CcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------eEecCCchhhEEEcCCCCEEEEEeccceecc
Confidence 89999886532 4889999999999999999999998 9999999999999999999999999998765
Q ss_pred Ccc---cccccccccCCCCCCCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccch
Q 047954 429 QPI---AAQRMISYKSPEYQSSKKI-SRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDS 504 (582)
Q Consensus 429 ~~~---~~~~~~~y~aPE~~~~~~~-~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 504 (582)
... ...+++.|+|||.+.+..+ +.++|||||||++|||++|+.||.......... .+...
T Consensus 160 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~----------------~i~~~ 223 (336)
T 3h4j_B 160 DGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK----------------KVNSC 223 (336)
T ss_dssp TSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBC----------------CCCSS
T ss_pred CCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHH----------------HHHcC
Confidence 432 3457889999999988776 789999999999999999999997533211000 00000
Q ss_pred hhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 505 EISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 505 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
...... .....+.+++.+||+.||++|||++|++++.|.-.
T Consensus 224 ~~~~p~---~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~ 264 (336)
T 3h4j_B 224 VYVMPD---FLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNV 264 (336)
T ss_dssp CCCCCT---TSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHT
T ss_pred CCCCcc---cCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhcc
Confidence 000000 01125778999999999999999999999988643
No 100
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.3e-41 Score=346.96 Aligned_cols=257 Identities=22% Similarity=0.345 Sum_probs=199.6
Q ss_pred ccccccccCceEEEEEEEc------CCceEEEEEecCCC-cchHHHHHHHHHHHhcC-CCCCccccceEEEeCCeeEEEE
Q 047954 272 PAEGLGKGIFGNSYKALLE------GRAPVVVKRLRDLK-PLITEEFRKQLLVIADQ-KHPNLLPLLAYYFSNDEKLLVY 343 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 343 (582)
..+.||+|+||.||+|... .+..||||.+.... ....+.+.+|+.++.++ +||||+++++++...+..++||
T Consensus 49 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 128 (344)
T 1rjb_A 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIF 128 (344)
T ss_dssp EEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEE
Confidence 3578999999999999962 34579999997432 23456789999999999 9999999999999999999999
Q ss_pred EeCCCCChHHHHhcCCCCC-----------------CCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCC
Q 047954 344 KFAGNGNLFNRIHGGKSSK-----------------NRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKST 406 (582)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~-----------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~ 406 (582)
||+++|+|.+++....... ....+++..++.++.||+.||+|||+.+ |+||||||+
T Consensus 129 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-------ivH~Dikp~ 201 (344)
T 1rjb_A 129 EYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS-------CVHRDLAAR 201 (344)
T ss_dssp ECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT-------EEETTCSGG
T ss_pred ecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-------cccCCCChh
Confidence 9999999999997653210 0124789999999999999999999998 999999999
Q ss_pred CeeecCCCceEEeeccccccccCcc------cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCC
Q 047954 407 NILLDDNEMVLVSDYGFSSLVAQPI------AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQG 479 (582)
Q Consensus 407 NILl~~~~~~kl~DfG~a~~~~~~~------~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~ 479 (582)
|||++.++.+||+|||+++...... ...+++.|+|||.+.+..++.++|||||||++|||+| |+.||.....
T Consensus 202 NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~- 280 (344)
T 1rjb_A 202 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV- 280 (344)
T ss_dssp GEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC-
T ss_pred hEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCc-
Confidence 9999999999999999998764332 2234567999999988899999999999999999998 9999965321
Q ss_pred CCccchHHHHHHHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCCC
Q 047954 480 INGADLCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTES 552 (582)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 552 (582)
... +............. . ....++.+++.+||+.||++|||+.|++++|+.+.....
T Consensus 281 --~~~----~~~~~~~~~~~~~~-~---------~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 337 (344)
T 1rjb_A 281 --DAN----FYKLIQNGFKMDQP-F---------YATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAE 337 (344)
T ss_dssp --SHH----HHHHHHTTCCCCCC-T---------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred --HHH----HHHHHhcCCCCCCC-C---------CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHH
Confidence 111 12222222111110 0 112357889999999999999999999999998876543
No 101
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.9e-41 Score=337.43 Aligned_cols=247 Identities=22% Similarity=0.377 Sum_probs=200.0
Q ss_pred ccccccCceEEEEEEEc---CCceEEEEEecCCC-cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCC
Q 047954 274 EGLGKGIFGNSYKALLE---GRAPVVVKRLRDLK-PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNG 349 (582)
Q Consensus 274 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 349 (582)
+.||+|+||.||+|... ++..||||+++... ....+.+.+|++++++++||||+++++++ ..+..++||||++++
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~ 94 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGG 94 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCC
Confidence 47999999999999854 56789999997643 34567799999999999999999999999 556789999999999
Q ss_pred ChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccC
Q 047954 350 NLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ 429 (582)
Q Consensus 350 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~ 429 (582)
+|.+++.... ..+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 95 ~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~-------i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~ 162 (287)
T 1u59_A 95 PLHKFLVGKR-----EEIPVSNVAELLHQVSMGMKYLEEKN-------FVHRDLAARNVLLVNRHYAKISDFGLSKALGA 162 (287)
T ss_dssp EHHHHHTTCT-----TTSCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCSGGGEEEEETTEEEECCCTTCEECTT
T ss_pred CHHHHHHhCC-----ccCCHHHHHHHHHHHHHHHHHHHHCC-------EeeCCCchheEEEcCCCCEEECcccceeeecc
Confidence 9999996432 24889999999999999999999998 99999999999999999999999999987643
Q ss_pred cc-------cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHHHHHHhhcccccc
Q 047954 430 PI-------AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAEI 501 (582)
Q Consensus 430 ~~-------~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (582)
.. ...+++.|+|||.+.+..++.++||||||+++|||+| |+.||.... ..++...+ ........
T Consensus 163 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~----~~~~~~~i----~~~~~~~~ 234 (287)
T 1u59_A 163 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK----GPEVMAFI----EQGKRMEC 234 (287)
T ss_dssp CSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC----THHHHHHH----HTTCCCCC
T ss_pred CcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC----HHHHHHHH----hcCCcCCC
Confidence 21 2234678999999988889999999999999999999 999996432 22222222 11111111
Q ss_pred cchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCC
Q 047954 502 FDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTE 551 (582)
Q Consensus 502 ~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 551 (582)
.+ ....++.+++.+||+.||++||++.+++++|+.+....
T Consensus 235 -~~---------~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 274 (287)
T 1u59_A 235 -PP---------ECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 274 (287)
T ss_dssp -CT---------TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -CC---------CcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 11 11236788999999999999999999999999886443
No 102
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.5e-41 Score=345.20 Aligned_cols=255 Identities=22% Similarity=0.316 Sum_probs=196.2
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCCCcchHHHHHHHHHHHhcC-CCCCccccceEEEeCCeeEEEEEeCCCCC
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDLKPLITEEFRKQLLVIADQ-KHPNLLPLLAYYFSNDEKLLVYKFAGNGN 350 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~gs 350 (582)
.+.||+|+||.||+|.. .+++.||||++........+.+.+|+.++.++ +||||+++++++.+.+..++||||+++|+
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 97 (316)
T 2ac3_A 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS 97 (316)
T ss_dssp CCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred CceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCc
Confidence 46799999999999985 46889999999766556678899999999884 79999999999999999999999999999
Q ss_pred hHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCc---eEEeeccccccc
Q 047954 351 LFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM---VLVSDYGFSSLV 427 (582)
Q Consensus 351 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~---~kl~DfG~a~~~ 427 (582)
|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++. +||+|||+++..
T Consensus 98 L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~lH~~~-------ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~ 164 (316)
T 2ac3_A 98 ILSHIHKRR------HFNELEASVVVQDVASALDFLHNKG-------IAHRDLKPENILCEHPNQVSPVKICDFDLGSGI 164 (316)
T ss_dssp HHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHTT-------CCCCCCCGGGEEESCSSSSCSEEECCTTCCC--
T ss_pred HHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHhCC-------ceeCCCCHHHEEEccCCCcCceEEEEccCcccc
Confidence 999997532 4888999999999999999999998 999999999999998776 999999998765
Q ss_pred cCc-----------ccccccccccCCCCCCC-----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccc-------
Q 047954 428 AQP-----------IAAQRMISYKSPEYQSS-----KKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGAD------- 484 (582)
Q Consensus 428 ~~~-----------~~~~~~~~y~aPE~~~~-----~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~------- 484 (582)
... ....++..|+|||++.. ..++.++|||||||++|||++|+.||...........
T Consensus 165 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 244 (316)
T 2ac3_A 165 KLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPA 244 (316)
T ss_dssp -----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHH
T ss_pred ccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchh
Confidence 321 12237789999998864 4578999999999999999999999975432211100
Q ss_pred hHHHHHHHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhc
Q 047954 485 LCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547 (582)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 547 (582)
....+...+..... ....... .....++.+++.+||+.||++|||+.|+++|.+..
T Consensus 245 ~~~~~~~~i~~~~~-~~~~~~~------~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~ 300 (316)
T 2ac3_A 245 CQNMLFESIQEGKY-EFPDKDW------AHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300 (316)
T ss_dssp HHHHHHHHHHHCCC-CCCHHHH------TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC
T ss_pred HHHHHHHHHhccCc-ccCchhc------ccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhc
Confidence 01111111111111 0000000 01123578899999999999999999999987753
No 103
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.8e-41 Score=339.86 Aligned_cols=251 Identities=29% Similarity=0.446 Sum_probs=205.0
Q ss_pred ccccccccCceEEEEEEEcC-CceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCC
Q 047954 272 PAEGLGKGIFGNSYKALLEG-RAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGN 350 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 350 (582)
..+.||+|+||.||+|.... +..||+|.+... ....+.+.+|+.++++++||||+++++++...+..++||||+++|+
T Consensus 17 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 95 (288)
T 3kfa_A 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 95 (288)
T ss_dssp EEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEE
T ss_pred EEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCc
Confidence 35789999999999999764 778999998653 3456789999999999999999999999999999999999999999
Q ss_pred hHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccCc
Q 047954 351 LFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP 430 (582)
Q Consensus 351 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~~ 430 (582)
|.+++..... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 96 L~~~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~-------i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 164 (288)
T 3kfa_A 96 LLDYLRECNR----QEVSAVVLLYMATQISSAMEYLEKKN-------FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164 (288)
T ss_dssp HHHHHHHCCT----TTSCHHHHHHHHHHHHHHHHHHHHHT-------CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSS
T ss_pred HHHHHHhccc----CCccHhHHHHHHHHHHHHHHHHHHCC-------ccCCCCCcceEEEcCCCCEEEccCccceeccCC
Confidence 9999976432 25889999999999999999999998 999999999999999999999999999876543
Q ss_pred c-----cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHHHHHHhhcccccccch
Q 047954 431 I-----AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDS 504 (582)
Q Consensus 431 ~-----~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 504 (582)
. ...++..|+|||.+.+..++.++||||||+++|+|++ |+.||.... ...+...+. ........
T Consensus 165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~----~~~~~~~~~----~~~~~~~~-- 234 (288)
T 3kfa_A 165 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID----LSQVYELLE----KDYRMERP-- 234 (288)
T ss_dssp SSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC----GGGHHHHHH----TTCCCCCC--
T ss_pred ccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC----HHHHHHHHh----ccCCCCCC--
Confidence 2 2234567999999988899999999999999999999 999986432 222222221 11111110
Q ss_pred hhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCCC
Q 047954 505 EISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTES 552 (582)
Q Consensus 505 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 552 (582)
......+.+++.+||+.||++|||+.|+++.|+.+.....
T Consensus 235 --------~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~~ 274 (288)
T 3kfa_A 235 --------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 274 (288)
T ss_dssp --------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred --------CCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 0111357889999999999999999999999998875443
No 104
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.5e-41 Score=343.63 Aligned_cols=246 Identities=22% Similarity=0.394 Sum_probs=192.7
Q ss_pred cccccccCceEEEEEEEc-CCce----EEEEEecCC-CcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAP----VVVKRLRDL-KPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFA 346 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~----vavK~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 346 (582)
.+.||+|+||.||+|... ++.. |++|.+... .....+.+.+|+.++++++||||+++++++.... .++|+||+
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~~~ 98 (327)
T 3lzb_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLM 98 (327)
T ss_dssp EEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEECCC
T ss_pred EEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEEEec
Confidence 467999999999999964 3433 577777543 3445678999999999999999999999998765 78999999
Q ss_pred CCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccc
Q 047954 347 GNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSL 426 (582)
Q Consensus 347 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~ 426 (582)
.+|+|.+++..... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 99 ~~g~L~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~-------ivH~Dikp~NIl~~~~~~~kL~DfG~a~~ 166 (327)
T 3lzb_A 99 PFGCLLDYVREHKD-----NIGSQYLLNWCVQIAKGMNYLEDRR-------LVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp SSCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCCGGGEEEEETTEEEECCTTC---
T ss_pred CCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHhhCC-------CcCCCCCHHHEEEcCCCCEEEccCcceeE
Confidence 99999999976432 4889999999999999999999998 99999999999999999999999999987
Q ss_pred ccCcc------cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHHHHHHhhcccc
Q 047954 427 VAQPI------AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTA 499 (582)
Q Consensus 427 ~~~~~------~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (582)
..... ...++..|+|||.+.+..++.++|||||||++|||++ |+.||.... ...+...+. .....
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~----~~~~~~~~~----~~~~~ 238 (327)
T 3lzb_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP----ASEISSILE----KGERL 238 (327)
T ss_dssp -------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC----GGGHHHHHH----TTCCC
T ss_pred ccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCC----HHHHHHHHH----cCCCC
Confidence 64332 2234567999999999999999999999999999999 999996432 222322221 11111
Q ss_pred cccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhccc
Q 047954 500 EIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKV 549 (582)
Q Consensus 500 ~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 549 (582)
.. . .....++.+++.+||+.||++|||+.|+++.|+.+..
T Consensus 239 ~~-~---------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 239 PQ-P---------PICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp CC-C---------TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred CC-C---------ccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 00 0 0112257889999999999999999999999998864
No 105
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.7e-42 Score=349.70 Aligned_cols=254 Identities=18% Similarity=0.287 Sum_probs=183.8
Q ss_pred cccccccCceEEEEEEEcCCceEEEEEecCCCcchHHHHHHHHHHHhc--CCCCCccccceEEEeCC----eeEEEEEeC
Q 047954 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIAD--QKHPNLLPLLAYYFSND----EKLLVYKFA 346 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~~~~~~~~----~~~lv~e~~ 346 (582)
.+.||+|+||.||+|+.. ++.||||++... ....+.+|.+++.. ++||||+++++++.... ..++||||+
T Consensus 8 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 83 (303)
T 3gxj_A 8 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 83 (303)
T ss_dssp CEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEECC
T ss_pred hhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEecc
Confidence 467999999999999875 778999998643 34667788888877 79999999999998876 789999999
Q ss_pred CCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHh--------ccCCCCCCCcceecCCCCCCeeecCCCceEE
Q 047954 347 GNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH--------HKDKSRTQSAVIHGNLKSTNILLDDNEMVLV 418 (582)
Q Consensus 347 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl 418 (582)
++|+|.+++... .+++..++.++.|++.||+||| +.+ |+||||||+|||++.++.+||
T Consensus 84 ~~g~L~~~l~~~-------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~-------ivH~Dlkp~Nil~~~~~~~kl 149 (303)
T 3gxj_A 84 EHGSLFDYLNRY-------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-------IAHRDLKSKNILVKKNGTCCI 149 (303)
T ss_dssp TTCCHHHHHHHC-------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC--------CCCSCCCGGGC-CCTTCCC-B
T ss_pred CCCCHHHHHhcc-------CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC-------EeeCcCCHHHeEECCCCCEEE
Confidence 999999999643 3778889999999999999999 666 999999999999999999999
Q ss_pred eeccccccccCccc--------ccccccccCCCCCCCC------CCCcchhHHHHHHHHHHHHhC----------CCCCC
Q 047954 419 SDYGFSSLVAQPIA--------AQRMISYKSPEYQSSK------KISRKSDVWSFGCLLLELLTG----------RISTH 474 (582)
Q Consensus 419 ~DfG~a~~~~~~~~--------~~~~~~y~aPE~~~~~------~~~~k~DVwS~Gvvl~elltG----------~~P~~ 474 (582)
+|||+++....... ..+|+.|+|||++.+. .++.++|||||||++|||+|| +.||.
T Consensus 150 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~ 229 (303)
T 3gxj_A 150 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY 229 (303)
T ss_dssp CCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTT
T ss_pred eecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecccc
Confidence 99999977644322 2478899999998765 344689999999999999999 66665
Q ss_pred CCCCCCCc-cchHHHHHHHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCCC
Q 047954 475 SAPQGING-ADLCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTES 552 (582)
Q Consensus 475 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 552 (582)
........ ..+.. ............. .....+....+.+++.+||+.||++|||+.+|++.|+.+...+.
T Consensus 230 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~~ 300 (303)
T 3gxj_A 230 DLVPSDPSVEEMRK----VVCEQKLRPNIPN----RWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 300 (303)
T ss_dssp TTCC-CCCCC-CHH----HHTTSCCCCCCCG----GGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC--
T ss_pred ccCCCCccHHHHHH----HHHHhhcCCCccc----cccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhcc
Confidence 43221111 11111 1111111111111 11122445678999999999999999999999999999886543
No 106
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.2e-41 Score=344.97 Aligned_cols=245 Identities=20% Similarity=0.336 Sum_probs=193.2
Q ss_pred cccccccCceEEEEEEEcCCceEEEEEecCCC--cchHHHHHHHHHHHhcCCC--CCccccceEEEeCCeeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLK--PLITEEFRKQLLVIADQKH--PNLLPLLAYYFSNDEKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H--~niv~l~~~~~~~~~~~lv~e~~~~ 348 (582)
.+.||+|+||.||+|...++..||||++.... ....+.+.+|+.++.+++| |||+++++++......++||| +.+
T Consensus 14 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~ 92 (343)
T 3dbq_A 14 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 92 (343)
T ss_dssp EEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-CCS
T ss_pred EEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-CCC
Confidence 46799999999999999889999999986432 3345778999999999987 999999999999999999999 568
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccccc
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~ 428 (582)
|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++ ++.+||+|||+++...
T Consensus 93 ~~L~~~l~~~~------~~~~~~~~~i~~qi~~al~~lH~~~-------iiHrDikp~NIll~-~~~~kl~DFG~a~~~~ 158 (343)
T 3dbq_A 93 IDLNSWLKKKK------SIDPWERKSYWKNMLEAVHTIHQHG-------IVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 158 (343)
T ss_dssp EEHHHHHHHSC------CCCHHHHHHHHHHHHHHHHHHHHTT-------CCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred CCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCC-------eecCCCCcceEEEE-CCcEEEeecccccccC
Confidence 89999997542 4888999999999999999999998 99999999999997 5789999999998765
Q ss_pred Ccc------cccccccccCCCCCCC-----------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHH
Q 047954 429 QPI------AAQRMISYKSPEYQSS-----------KKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLR 491 (582)
Q Consensus 429 ~~~------~~~~~~~y~aPE~~~~-----------~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~ 491 (582)
... ...+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.... ........
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~~ 232 (343)
T 3dbq_A 159 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII------NQISKLHA 232 (343)
T ss_dssp -----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC------SHHHHHHH
T ss_pred cccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh------hHHHHHHH
Confidence 432 2347889999998754 678999999999999999999999996422 11122222
Q ss_pred HHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 492 AVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 492 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
...........+ . ...++.+++.+||+.||++|||+.|+++|.|.-.
T Consensus 233 ~~~~~~~~~~~~-------~---~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~ 279 (343)
T 3dbq_A 233 IIDPNHEIEFPD-------I---PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 279 (343)
T ss_dssp HHCTTSCCCCCC-------C---SCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred HhcCCcccCCcc-------c---CCHHHHHHHHHHcCCChhHCCCHHHHHhCccccc
Confidence 222111111110 0 0125778999999999999999999999988654
No 107
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.3e-40 Score=340.11 Aligned_cols=243 Identities=19% Similarity=0.290 Sum_probs=189.9
Q ss_pred cccccccCceEEEEEEE----cCCceEEEEEecCCC----cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEE
Q 047954 273 AEGLGKGIFGNSYKALL----EGRAPVVVKRLRDLK----PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYK 344 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 344 (582)
.+.||+|+||.||+|+. .+++.||+|+++... ......+.+|+.++++++||||+++++++...+..++|||
T Consensus 22 ~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 101 (327)
T 3a62_A 22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILE 101 (327)
T ss_dssp EEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred EEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEEe
Confidence 46799999999999997 478899999997532 2234567889999999999999999999999999999999
Q ss_pred eCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccc
Q 047954 345 FAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS 424 (582)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a 424 (582)
|+++|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 102 ~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~al~~lH~~~-------ivH~Dlkp~Nill~~~~~~kl~Dfg~~ 168 (327)
T 3a62_A 102 YLSGGELFMQLEREG------IFMEDTACFYLAEISMALGHLHQKG-------IIYRDLKPENIMLNHQGHVKLTDFGLC 168 (327)
T ss_dssp CCTTEEHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHTT-------CCCCCCCTTTEEECTTSCEEECCCSCC
T ss_pred CCCCCcHHHHHHhCC------CCCHHHHHHHHHHHHHHHHHHHhCC-------EEcccCCHHHeEECCCCcEEEEeCCcc
Confidence 999999999997532 4788899999999999999999998 999999999999999999999999999
Q ss_pred ccccCc----ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhccccc
Q 047954 425 SLVAQP----IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAE 500 (582)
Q Consensus 425 ~~~~~~----~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (582)
+..... ....+++.|+|||++.+..++.++|||||||++|||++|+.||.... ...... ....... .
T Consensus 169 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~----~~~~~~---~i~~~~~--~ 239 (327)
T 3a62_A 169 KESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN----RKKTID---KILKCKL--N 239 (327)
T ss_dssp ----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS----HHHHHH---HHHHTCC--C
T ss_pred cccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCC----HHHHHH---HHHhCCC--C
Confidence 764322 23357889999999998899999999999999999999999996421 112221 2111110 0
Q ss_pred ccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCC-----ChHHHHHHHhhc
Q 047954 501 IFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRP-----EMAEVVSELEII 547 (582)
Q Consensus 501 ~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~~i 547 (582)
. .+ ....++.+++.+||+.||++|| ++.|+++|.+.-
T Consensus 240 ~-p~---------~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~ 281 (327)
T 3a62_A 240 L-PP---------YLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFR 281 (327)
T ss_dssp C-CT---------TSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGS
T ss_pred C-CC---------CCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCccc
Confidence 0 00 0112577899999999999999 888999998753
No 108
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.1e-40 Score=343.03 Aligned_cols=250 Identities=19% Similarity=0.298 Sum_probs=197.5
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCC---cchHHHHHHHHHHHhcC-CCCCccccceEEEeCCeeEEEEEeCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK---PLITEEFRKQLLVIADQ-KHPNLLPLLAYYFSNDEKLLVYKFAG 347 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~ 347 (582)
.+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|..++.++ +||||+++++++.+.+..++||||++
T Consensus 14 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~ 93 (345)
T 3a8x_A 14 LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 93 (345)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCC
Confidence 467999999999999975 57889999996432 23345688999999987 89999999999999999999999999
Q ss_pred CCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccc
Q 047954 348 NGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV 427 (582)
Q Consensus 348 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~ 427 (582)
+|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 94 gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~LH~~~-------ivHrDlkp~NIll~~~g~~kL~DFG~a~~~ 160 (345)
T 3a8x_A 94 GGDLMFHMQRQR------KLPEEHARFYSAEISLALNYLHERG-------IIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 160 (345)
T ss_dssp SCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHTT-------CBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred CCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------ceecCCCHHHEEECCCCCEEEEeccccccc
Confidence 999999997532 4889999999999999999999998 999999999999999999999999999864
Q ss_pred cC----cccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCC-ccchHHHHHHHHhhccccccc
Q 047954 428 AQ----PIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGIN-GADLCSWVLRAVREEWTAEIF 502 (582)
Q Consensus 428 ~~----~~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 502 (582)
.. .....+|+.|+|||++.+..++.++|||||||++|||++|+.||........ .......+...+..... .+
T Consensus 161 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~-~~- 238 (345)
T 3a8x_A 161 LRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-RI- 238 (345)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC-CC-
T ss_pred cCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC-CC-
Confidence 32 2234578899999999999999999999999999999999999964321100 01111222222221111 00
Q ss_pred chhhhhhhchHHHHHHHHHHHHHcccCCCCCCCCh------HHHHHHHhh
Q 047954 503 DSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEM------AEVVSELEI 546 (582)
Q Consensus 503 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~------~evl~~L~~ 546 (582)
.. ....++.+++.+||+.||++||++ .|+++|.+.
T Consensus 239 p~---------~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f 279 (345)
T 3a8x_A 239 PR---------SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 279 (345)
T ss_dssp CT---------TSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGG
T ss_pred CC---------CCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCcc
Confidence 00 112257789999999999999995 789888764
No 109
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.9e-41 Score=358.59 Aligned_cols=249 Identities=16% Similarity=0.190 Sum_probs=197.2
Q ss_pred cccccccCceEEEEEEEcC-CceEEEEEecCCC---cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALLEG-RAPVVVKRLRDLK---PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 348 (582)
.+.||+|+||+||+|+... ++.||+|+++... ....+.+.+|+.++.+++||||++++++|.+.+..++|||||++
T Consensus 79 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~g 158 (437)
T 4aw2_A 79 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVG 158 (437)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCC
Confidence 4679999999999999764 6789999986421 11223488999999999999999999999999999999999999
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccccc
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~ 428 (582)
|+|.+++.... ..+++..+..++.||+.||+|||+.+ ||||||||+|||++.++.+||+|||+|+...
T Consensus 159 g~L~~~l~~~~-----~~l~e~~~~~~~~qi~~aL~~LH~~g-------iiHrDLKp~NILl~~~g~vkL~DFGla~~~~ 226 (437)
T 4aw2_A 159 GDLLTLLSKFE-----DRLPEEMARFYLAEMVIAIDSVHQLH-------YVHRDIKPDNILMDMNGHIRLADFGSCLKLM 226 (437)
T ss_dssp CBHHHHHHTTT-----TCCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred CcHHHHHHHcc-----CCCCHHHHHHHHHHHHHHHHHHHhCC-------eEecccCHHHeeEcCCCCEEEcchhhhhhcc
Confidence 99999997532 24889999999999999999999998 9999999999999999999999999997664
Q ss_pred Ccc-----cccccccccCCCCCC-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhccc
Q 047954 429 QPI-----AAQRMISYKSPEYQS-----SKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWT 498 (582)
Q Consensus 429 ~~~-----~~~~~~~y~aPE~~~-----~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (582)
... ...||+.|+|||++. ...++.++|||||||++|||++|+.||... +..+....+......-..
T Consensus 227 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~----~~~~~~~~i~~~~~~~~~ 302 (437)
T 4aw2_A 227 EDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE----SLVETYGKIMNHKERFQF 302 (437)
T ss_dssp TTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCS----SHHHHHHHHHTHHHHCCC
T ss_pred cCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCC----ChhHHHHhhhhccccccC
Confidence 332 235789999999986 567899999999999999999999999642 222222222211111111
Q ss_pred ccccchhhhhhhchHHHHHHHHHHHHHcccCCCCC--CCChHHHHHHHhhc
Q 047954 499 AEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEK--RPEMAEVVSELEII 547 (582)
Q Consensus 499 ~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~L~~i 547 (582)
+... .....++.+|+.+||..+|++ ||+++|+++|.+.-
T Consensus 303 p~~~----------~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~ 343 (437)
T 4aw2_A 303 PTQV----------TDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFS 343 (437)
T ss_dssp CSSC----------CCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGT
T ss_pred Cccc----------ccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccC
Confidence 1110 001125778889999888888 99999999998764
No 110
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=7.1e-41 Score=345.03 Aligned_cols=243 Identities=21% Similarity=0.274 Sum_probs=200.1
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCC---cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK---PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 348 (582)
.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+....++||||+++
T Consensus 46 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g 125 (350)
T 1rdq_E 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125 (350)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCC
Confidence 467999999999999975 67899999985421 23456788999999999999999999999999999999999999
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccccc
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~ 428 (582)
|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 126 g~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~-------ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~ 192 (350)
T 1rdq_E 126 GEMFSHLRRIG------RFSEPHARFYAAQIVLTFEYLHSLD-------LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192 (350)
T ss_dssp CBHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred CcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------cccccCccceEEECCCCCEEEcccccceecc
Confidence 99999997532 4888999999999999999999998 9999999999999999999999999998765
Q ss_pred Cc-ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccchhhh
Q 047954 429 QP-IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEIS 507 (582)
Q Consensus 429 ~~-~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 507 (582)
.. ....+|+.|+|||++.+..++.++|||||||++|||++|+.||... ....+...+ .... . .. ..
T Consensus 193 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~----~~~~~~~~i---~~~~-~-~~-p~--- 259 (350)
T 1rdq_E 193 GRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD----QPIQIYEKI---VSGK-V-RF-PS--- 259 (350)
T ss_dssp SCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS----SHHHHHHHH---HHCC-C-CC-CT---
T ss_pred CCcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCC----CHHHHHHHH---HcCC-C-CC-CC---
Confidence 43 2345789999999999999999999999999999999999999642 112222211 1111 1 00 00
Q ss_pred hhhchHHHHHHHHHHHHHcccCCCCCCCC-----hHHHHHHHhhc
Q 047954 508 VQRSAAHGMLKLLQVAIQCCNKSPEKRPE-----MAEVVSELEII 547 (582)
Q Consensus 508 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~L~~i 547 (582)
....++.+++.+||+.||++||+ ++||++|.+..
T Consensus 260 ------~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~ 298 (350)
T 1rdq_E 260 ------HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298 (350)
T ss_dssp ------TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGT
T ss_pred ------CCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcC
Confidence 11125778999999999999998 99999988753
No 111
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=6.1e-41 Score=345.73 Aligned_cols=247 Identities=21% Similarity=0.300 Sum_probs=185.1
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCCh
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNL 351 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 351 (582)
.+.||+|+||.||+|... +++.||||+++... ..+.+.+|+.++++++||||+++++++...+..++||||+++|+|
T Consensus 58 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 135 (349)
T 2w4o_A 58 ESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGEL 135 (349)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCH
Confidence 467999999999999976 46789999997532 346788999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecC---CCceEEeecccccccc
Q 047954 352 FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDD---NEMVLVSDYGFSSLVA 428 (582)
Q Consensus 352 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~---~~~~kl~DfG~a~~~~ 428 (582)
.+++.... .+++..++.++.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||+++...
T Consensus 136 ~~~l~~~~------~~~~~~~~~i~~qi~~~L~~LH~~~-------ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~ 202 (349)
T 2w4o_A 136 FDRIVEKG------YYSERDAADAVKQILEAVAYLHENG-------IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE 202 (349)
T ss_dssp HHHHTTCS------SCCHHHHHHHHHHHHHHHHHHHHTT-------CCCCCCCGGGEEESSSSTTCCEEECCCC------
T ss_pred HHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------eEecCCCcccEEEecCCCCCCEEEccCccccccC
Confidence 99996432 4889999999999999999999998 999999999999975 8899999999998765
Q ss_pred Cc---ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccchh
Q 047954 429 QP---IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSE 505 (582)
Q Consensus 429 ~~---~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 505 (582)
.. ....+++.|+|||++.+..++.++|||||||++|||++|+.||..... ...+. ......... ...+.
T Consensus 203 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~---~~~~~---~~i~~~~~~--~~~~~ 274 (349)
T 2w4o_A 203 HQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERG---DQFMF---RRILNCEYY--FISPW 274 (349)
T ss_dssp ----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTC---HHHHH---HHHHTTCCC--CCTTT
T ss_pred cccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcc---cHHHH---HHHHhCCCc--cCCch
Confidence 43 234478899999999999999999999999999999999999964321 11111 111111110 00000
Q ss_pred hhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 506 ISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 506 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
......++.+++.+||+.||++|||+.|++++.+...
T Consensus 275 ------~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~ 311 (349)
T 2w4o_A 275 ------WDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTG 311 (349)
T ss_dssp ------TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTS
T ss_pred ------hhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccCC
Confidence 0111235778999999999999999999999987544
No 112
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=1e-40 Score=347.25 Aligned_cols=245 Identities=21% Similarity=0.317 Sum_probs=196.7
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCC---CcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDL---KPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 348 (582)
.+.||+|+||.||+|... +++.||+|++... .....+.+.+|+.++++++|||||++++++.+.+..++||||+.+
T Consensus 20 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~g 99 (384)
T 4fr4_A 20 LRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLG 99 (384)
T ss_dssp EEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCC
Confidence 467999999999999965 4678999998542 123456788999999999999999999999999999999999999
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccccc
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~ 428 (582)
|+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+.
T Consensus 100 g~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~LH~~g-------ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 166 (384)
T 4fr4_A 100 GDLRYHLQQNV------HFKEETVKLFICELVMALDYLQNQR-------IIHRDMKPDNILLDEHGHVHITDFNIAAMLP 166 (384)
T ss_dssp EEHHHHHHTTC------CCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred CcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------ceeccCcHHHeEECCCCCEEEeccceeeecc
Confidence 99999997532 4889999999999999999999998 9999999999999999999999999998764
Q ss_pred Cc---ccccccccccCCCCCCC---CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhccccccc
Q 047954 429 QP---IAAQRMISYKSPEYQSS---KKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIF 502 (582)
Q Consensus 429 ~~---~~~~~~~~y~aPE~~~~---~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (582)
.. ....+|+.|+|||++.. ..++.++|||||||++|||++|+.||..... ......... ...... ..
T Consensus 167 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~----~~~~~~~~~-~~~~~~-~~- 239 (384)
T 4fr4_A 167 RETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSS----TSSKEIVHT-FETTVV-TY- 239 (384)
T ss_dssp TTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTT----SCHHHHHHH-HHHCCC-CC-
T ss_pred CCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCC----ccHHHHHHH-Hhhccc-CC-
Confidence 43 23457889999999864 4589999999999999999999999964322 111111111 111110 00
Q ss_pred chhhhhhhchHHHHHHHHHHHHHcccCCCCCCCC-hHHHHHHHhh
Q 047954 503 DSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPE-MAEVVSELEI 546 (582)
Q Consensus 503 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-~~evl~~L~~ 546 (582)
. ......+.+++.+||+.||++||+ ++++++|.+.
T Consensus 240 p---------~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f 275 (384)
T 4fr4_A 240 P---------SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYM 275 (384)
T ss_dssp C---------TTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGG
T ss_pred C---------CcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhh
Confidence 0 011125788999999999999998 7888876654
No 113
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=2.6e-41 Score=354.77 Aligned_cols=247 Identities=19% Similarity=0.234 Sum_probs=197.2
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCC---cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK---PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 348 (582)
.+.||+|+||+||+|+.. +++.||+|+++... ....+.+.+|+.+++.++|||||+++++|.+.+..++||||+++
T Consensus 74 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~g 153 (410)
T 3v8s_A 74 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPG 153 (410)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence 467999999999999976 57789999985421 12234578999999999999999999999999999999999999
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccccc
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~ 428 (582)
|+|.+++... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 154 g~L~~~l~~~-------~~~e~~~~~~~~qi~~aL~~LH~~g-------ivHrDLKp~NILl~~~g~ikL~DFG~a~~~~ 219 (410)
T 3v8s_A 154 GDLVNLMSNY-------DVPEKWARFYTAEVVLALDAIHSMG-------FIHRDVKPDNMLLDKSGHLKLADFGTCMKMN 219 (410)
T ss_dssp EEHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred CcHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHCC-------eEeccCCHHHeeECCCCCEEEeccceeEeec
Confidence 9999999743 3788899999999999999999998 9999999999999999999999999998765
Q ss_pred Ccc-----cccccccccCCCCCCCCC----CCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccc
Q 047954 429 QPI-----AAQRMISYKSPEYQSSKK----ISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTA 499 (582)
Q Consensus 429 ~~~-----~~~~~~~y~aPE~~~~~~----~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (582)
... ...+|+.|+|||++.+.. ++.++|||||||++|||+||+.||... +.......+.........+
T Consensus 220 ~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~----~~~~~~~~i~~~~~~~~~p 295 (410)
T 3v8s_A 220 KEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD----SLVGTYSKIMNHKNSLTFP 295 (410)
T ss_dssp TTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCS----SHHHHHHHHHTHHHHCCCC
T ss_pred cCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCC----ChhhHHHHHHhccccccCC
Confidence 432 345889999999987655 789999999999999999999999642 2222222222111110011
Q ss_pred cccchhhhhhhchHHHHHHHHHHHHHcccCCCCC--CCChHHHHHHHhhcc
Q 047954 500 EIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEK--RPEMAEVVSELEIIK 548 (582)
Q Consensus 500 ~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~L~~i~ 548 (582)
.. . ....++.+|+.+||..+|++ ||+++||++|.+.-.
T Consensus 296 ~~--~---------~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~ 335 (410)
T 3v8s_A 296 DD--N---------DISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKN 335 (410)
T ss_dssp TT--C---------CCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCC
T ss_pred Cc--c---------cccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccC
Confidence 00 0 01125778899999999988 999999999988643
No 114
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=4e-41 Score=345.94 Aligned_cols=242 Identities=22% Similarity=0.328 Sum_probs=196.5
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCC---cchHHHHHHHHHHHhcC-CCCCccccceEEEeCCeeEEEEEeCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK---PLITEEFRKQLLVIADQ-KHPNLLPLLAYYFSNDEKLLVYKFAG 347 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~ 347 (582)
.+.||+|+||.||+|+.. +++.||+|+++... ....+.+..|..++.++ +||||+++++++.+.+..++||||++
T Consensus 22 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~ 101 (345)
T 1xjd_A 22 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLN 101 (345)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCC
Confidence 467999999999999975 57889999996421 23456678899999876 99999999999999999999999999
Q ss_pred CCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccc
Q 047954 348 NGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV 427 (582)
Q Consensus 348 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~ 427 (582)
+|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 102 gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~-------ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 102 GGDLMYHIQSCH------KFDLSRATFYAAEIILGLQFLHSKG-------IVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp TCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHTT-------CBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred CCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------eEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 999999997532 4888999999999999999999998 999999999999999999999999999864
Q ss_pred cC----cccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccc
Q 047954 428 AQ----PIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFD 503 (582)
Q Consensus 428 ~~----~~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 503 (582)
.. .....+|+.|+|||++.+..++.++|||||||++|||++|+.||... +...+...+. ... . . +.
T Consensus 169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~----~~~~~~~~i~---~~~-~-~-~p 238 (345)
T 1xjd_A 169 MLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ----DEEELFHSIR---MDN-P-F-YP 238 (345)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS----SHHHHHHHHH---HCC-C-C-CC
T ss_pred ccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCC----CHHHHHHHHH---hCC-C-C-CC
Confidence 32 22345788999999999999999999999999999999999999642 1222222221 111 0 0 00
Q ss_pred hhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChH-HHHHHHhh
Q 047954 504 SEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMA-EVVSELEI 546 (582)
Q Consensus 504 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~-evl~~L~~ 546 (582)
.. ...++.+++.+||..||++||++. ||++|.+.
T Consensus 239 ~~---------~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f 273 (345)
T 1xjd_A 239 RW---------LEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLF 273 (345)
T ss_dssp TT---------SCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGG
T ss_pred cc---------cCHHHHHHHHHHhcCCHhHcCCChHHHHcCccc
Confidence 00 112577899999999999999998 88887664
No 115
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1e-40 Score=335.33 Aligned_cols=258 Identities=19% Similarity=0.277 Sum_probs=196.2
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCC--cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK--PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNG 349 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 349 (582)
.+.||+|+||+||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||||+.+
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~- 85 (292)
T 3o0g_A 7 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ- 85 (292)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-
T ss_pred eeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC-
Confidence 367999999999999975 57889999996433 33457788999999999999999999999999999999999975
Q ss_pred ChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccC
Q 047954 350 NLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ 429 (582)
Q Consensus 350 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~ 429 (582)
++.+.+.... ..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 86 ~l~~~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lH~~~-------ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 153 (292)
T 3o0g_A 86 DLKKYFDSCN-----GDLDPEIVKSFLFQLLKGLGFCHSRN-------VLHRDLKPQNLLINRNGELKLANFGLARAFGI 153 (292)
T ss_dssp EHHHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred CHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHhCC-------eecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence 6666665432 24889999999999999999999998 99999999999999999999999999987643
Q ss_pred c----ccccccccccCCCCCCCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccc-
Q 047954 430 P----IAAQRMISYKSPEYQSSKK-ISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFD- 503 (582)
Q Consensus 430 ~----~~~~~~~~y~aPE~~~~~~-~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d- 503 (582)
. ....++..|+|||++.+.. ++.++|||||||++|||+||..|+.... ...+....+.+............
T Consensus 154 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~---~~~~~~~~i~~~~~~~~~~~~~~~ 230 (292)
T 3o0g_A 154 PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN---DVDDQLKRIFRLLGTPTEEQWPSM 230 (292)
T ss_dssp CCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCS---SHHHHHHHHHHHHCCCCTTTCTTG
T ss_pred ccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCC---CHHHHHHHHHHHhCCCChhhhhhh
Confidence 3 2334678899999987765 7999999999999999999988864321 22222332322221110000000
Q ss_pred -------------hhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhh
Q 047954 504 -------------SEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEI 546 (582)
Q Consensus 504 -------------~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 546 (582)
..............++.+++.+||+.||++|||++|+++|.|.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f 286 (292)
T 3o0g_A 231 TKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286 (292)
T ss_dssp GGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred cccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCccc
Confidence 0000000001122357789999999999999999999998764
No 116
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.1e-40 Score=335.88 Aligned_cols=251 Identities=27% Similarity=0.397 Sum_probs=196.2
Q ss_pred ccccccccCceEEEEEEEcCC----ceEEEEEecCCC-cchHHHHHHHHHHHhcCCCCCccccceEEEe-CCeeEEEEEe
Q 047954 272 PAEGLGKGIFGNSYKALLEGR----APVVVKRLRDLK-PLITEEFRKQLLVIADQKHPNLLPLLAYYFS-NDEKLLVYKF 345 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~~~~----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~-~~~~~lv~e~ 345 (582)
..+.||+|+||.||+|...+. ..||+|.+.... ....+.+.+|+.++++++||||+++++++.. .+..++||||
T Consensus 29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~ 108 (298)
T 3f66_A 29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY 108 (298)
T ss_dssp EEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEEC
T ss_pred hcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeC
Confidence 357899999999999986432 358899987543 3345778999999999999999999998654 4578999999
Q ss_pred CCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccc
Q 047954 346 AGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSS 425 (582)
Q Consensus 346 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~ 425 (582)
+++|+|.+++.... ..+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 109 ~~~~~L~~~l~~~~-----~~~~~~~~~~i~~ql~~~l~~lH~~~-------i~H~dikp~Nil~~~~~~~kl~Dfg~a~ 176 (298)
T 3f66_A 109 MKHGDLRNFIRNET-----HNPTVKDLIGFGLQVAKGMKYLASKK-------FVHRDLAARNCMLDEKFTVKVADFGLAR 176 (298)
T ss_dssp CTTCBHHHHHHCTT-----CCCCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCSGGGEEECTTCCEEECSCGGGC
T ss_pred CCCCCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHhCC-------ccCCCCchheEEECCCCCEEECcccccc
Confidence 99999999997533 24788999999999999999999998 9999999999999999999999999998
Q ss_pred cccCcc--------cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhC-CCCCCCCCCCCCccchHHHHHHHHhhc
Q 047954 426 LVAQPI--------AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTG-RISTHSAPQGINGADLCSWVLRAVREE 496 (582)
Q Consensus 426 ~~~~~~--------~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG-~~P~~~~~~~~~~~~~~~~~~~~~~~~ 496 (582)
...... ...+++.|+|||.+.+..++.++||||||+++|||++| ..||... ...+....+.. ..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~----~~~~~~~~~~~---~~ 249 (298)
T 3f66_A 177 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV----NTFDITVYLLQ---GR 249 (298)
T ss_dssp CCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTS----CTTTHHHHHHT---TC
T ss_pred cccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccC----CHHHHHHHHhc---CC
Confidence 764432 22345679999999888999999999999999999994 5555432 12222222211 11
Q ss_pred ccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCCC
Q 047954 497 WTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTES 552 (582)
Q Consensus 497 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 552 (582)
. ...... ....+.+++.+||+.||++|||+.|+++.|+.+.....
T Consensus 250 -~-~~~~~~---------~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 294 (298)
T 3f66_A 250 -R-LLQPEY---------CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294 (298)
T ss_dssp -C-CCCCTT---------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred -C-CCCCcc---------CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 0 000000 11257889999999999999999999999999876443
No 117
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=7.2e-41 Score=340.32 Aligned_cols=255 Identities=27% Similarity=0.367 Sum_probs=198.7
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEe----CCeeEEEEEeCC
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS----NDEKLLVYKFAG 347 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~----~~~~~lv~e~~~ 347 (582)
.+.||+|+||.||+|.. .+++.||||++........+.+.+|+.++++++||||+++++++.. ....++||||+.
T Consensus 34 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~ 113 (317)
T 2buj_A 34 IQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFK 113 (317)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCT
T ss_pred EEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCC
Confidence 46799999999999996 5788999999876666667789999999999999999999999973 346789999999
Q ss_pred CCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccc
Q 047954 348 NGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV 427 (582)
Q Consensus 348 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~ 427 (582)
+|+|.+++...... ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 114 ~~~L~~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~-------ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 114 RGTLWNEIERLKDK--GNFLTEDQILWLLLGICRGLEAIHAKG-------YAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp TCBHHHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred CCcHHHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC-------cccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 99999998753211 235889999999999999999999998 999999999999999999999999998765
Q ss_pred cCcc-------------cccccccccCCCCCCCCC---CCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHH
Q 047954 428 AQPI-------------AAQRMISYKSPEYQSSKK---ISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLR 491 (582)
Q Consensus 428 ~~~~-------------~~~~~~~y~aPE~~~~~~---~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~ 491 (582)
.... ...++..|+|||.+.+.. ++.++|||||||++|||++|+.||...... ...+...+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~~~~-- 260 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK--GDSVALAV-- 260 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHT--TSCHHHHH--
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcc--cchhhHHh--
Confidence 3221 123478899999987654 689999999999999999999998531110 11111111
Q ss_pred HHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCCC
Q 047954 492 AVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTES 552 (582)
Q Consensus 492 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 552 (582)
....... . .......+.+++.+||+.||++|||+.+++++|+.+.....
T Consensus 261 --~~~~~~~--~--------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~ 309 (317)
T 2buj_A 261 --QNQLSIP--Q--------SPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAP 309 (317)
T ss_dssp --HCC--CC--C--------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCC
T ss_pred --hccCCCC--c--------cccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCC
Confidence 1110000 0 00112357889999999999999999999999999876544
No 118
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.4e-40 Score=348.07 Aligned_cols=245 Identities=20% Similarity=0.337 Sum_probs=193.3
Q ss_pred cccccccCceEEEEEEEcCCceEEEEEecCCC--cchHHHHHHHHHHHhcCC--CCCccccceEEEeCCeeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLK--PLITEEFRKQLLVIADQK--HPNLLPLLAYYFSNDEKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~--H~niv~l~~~~~~~~~~~lv~e~~~~ 348 (582)
.+.||+|+||.||+|...++..||||++.... ....+.+.+|+.++.+++ ||||+++++++...+..++||| +.+
T Consensus 61 ~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~~ 139 (390)
T 2zmd_A 61 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 139 (390)
T ss_dssp EEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CCS
T ss_pred EEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cCC
Confidence 46799999999999998888999999986432 334578999999999996 5999999999999999999999 568
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccccc
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~ 428 (582)
++|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++ ++.+||+|||+++.+.
T Consensus 140 ~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~lH~~~-------ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 140 IDLNSWLKKKK------SIDPWERKSYWKNMLEAVHTIHQHG-------IVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp EEHHHHHHHCS------SCCHHHHHHHHHHHHHHHHHHHTTT-------CCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred CCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------eeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 89999997543 4788889999999999999999998 99999999999996 5789999999998765
Q ss_pred Ccc------cccccccccCCCCCCC-----------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHH
Q 047954 429 QPI------AAQRMISYKSPEYQSS-----------KKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLR 491 (582)
Q Consensus 429 ~~~------~~~~~~~y~aPE~~~~-----------~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~ 491 (582)
... ...+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.... .....+..
T Consensus 206 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~------~~~~~~~~ 279 (390)
T 2zmd_A 206 PDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII------NQISKLHA 279 (390)
T ss_dssp --------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC------CHHHHHHH
T ss_pred CCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh------HHHHHHHH
Confidence 332 3347899999998764 468999999999999999999999996422 11122222
Q ss_pred HHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 492 AVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 492 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
...........+ .. ..++.+++.+||+.||++|||+.|++++.+...
T Consensus 280 ~~~~~~~~~~~~-------~~---~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~ 326 (390)
T 2zmd_A 280 IIDPNHEIEFPD-------IP---EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 326 (390)
T ss_dssp HHCTTSCCCCCC-------CS---CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred HhCccccCCCCc-------cc---hHHHHHHHHHHcccChhhCCCHHHHhhCcCccc
Confidence 222111111100 00 125778999999999999999999999987643
No 119
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=8.8e-41 Score=335.29 Aligned_cols=249 Identities=26% Similarity=0.473 Sum_probs=188.7
Q ss_pred cccccccCceEEEEEEEcCCceEEEEEecCCC--cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCC
Q 047954 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLK--PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGN 350 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 350 (582)
.+.||+|+||.||+|...+ .||+|+++... ....+.+.+|+.++++++||||+++++++ .....++||||+++++
T Consensus 29 ~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~ 105 (289)
T 3og7_A 29 GQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSS 105 (289)
T ss_dssp EEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEEE
T ss_pred eeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCCc
Confidence 4689999999999998654 49999986543 33456799999999999999999999965 5567899999999999
Q ss_pred hHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccCc
Q 047954 351 LFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP 430 (582)
Q Consensus 351 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~~ 430 (582)
|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 106 L~~~l~~~~-----~~~~~~~~~~i~~qi~~~L~~lH~~~-------i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 173 (289)
T 3og7_A 106 LYHHLHASE-----TKFEMKKLIDIARQTARGMDYLHAKS-------IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW 173 (289)
T ss_dssp HHHHHTTC--------CCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCCGGGEEEETTTEEEECCCC--------
T ss_pred HHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHHhCC-------cccccCccceEEECCCCCEEEccceeccccccc
Confidence 999996443 25889999999999999999999998 999999999999999999999999999765431
Q ss_pred ------ccccccccccCCCCCC---CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccc
Q 047954 431 ------IAAQRMISYKSPEYQS---SKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEI 501 (582)
Q Consensus 431 ------~~~~~~~~y~aPE~~~---~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (582)
....++..|+|||.+. +..++.++||||||+++|||++|+.||.... ....+. ...........
T Consensus 174 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~---~~~~~~----~~~~~~~~~~~ 246 (289)
T 3og7_A 174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN---NRDQII----EMVGRGSLSPD 246 (289)
T ss_dssp ----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCC---CHHHHH----HHHHHTSCCCC
T ss_pred cccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccc---hHHHHH----HHhcccccCcc
Confidence 1234688999999886 5678899999999999999999999996432 111122 22222111110
Q ss_pred cchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhccc
Q 047954 502 FDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKV 549 (582)
Q Consensus 502 ~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 549 (582)
... .......++.+++.+||+.||++|||+.++++.|+.+..
T Consensus 247 ~~~------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 247 LSK------VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp TTS------SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred hhh------ccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 000 001112368889999999999999999999999998764
No 120
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=7.9e-41 Score=337.51 Aligned_cols=254 Identities=20% Similarity=0.335 Sum_probs=197.2
Q ss_pred cccccccCceEEEEEEE-----cCCceEEEEEecCC-CcchHHHHHHHHHHHhcCCCCCccccceEEEeC--CeeEEEEE
Q 047954 273 AEGLGKGIFGNSYKALL-----EGRAPVVVKRLRDL-KPLITEEFRKQLLVIADQKHPNLLPLLAYYFSN--DEKLLVYK 344 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~~lv~e 344 (582)
.+.||+|+||.||+|++ .+++.||+|++... .....+.+.+|+.++++++||||+++++++... ...++|||
T Consensus 26 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 105 (302)
T 4e5w_A 26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIME 105 (302)
T ss_dssp EEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEE
T ss_pred hhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEE
Confidence 46899999999999984 46788999999743 234457899999999999999999999999877 56899999
Q ss_pred eCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccc
Q 047954 345 FAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS 424 (582)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a 424 (582)
|+++|+|.+++..... .+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 106 ~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~-------i~H~dikp~Nil~~~~~~~kl~Dfg~~ 173 (302)
T 4e5w_A 106 FLPSGSLKEYLPKNKN-----KINLKQQLKYAVQICKGMDYLGSRQ-------YVHRDLAARNVLVESEHQVKIGDFGLT 173 (302)
T ss_dssp CCTTCBHHHHHHHHTT-----TCCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred eCCCCcHHHHHHhccc-----cCCHHHHHHHHHHHHHHHHHhhcCC-------cccCCCchheEEEcCCCCEEECccccc
Confidence 9999999999964332 4889999999999999999999998 999999999999999999999999999
Q ss_pred ccccCcc-------cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC-------CCCccchHHHHH
Q 047954 425 SLVAQPI-------AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQ-------GINGADLCSWVL 490 (582)
Q Consensus 425 ~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~-------~~~~~~~~~~~~ 490 (582)
+...... ...++..|+|||.+.+..++.++||||||+++|||+||..|+..... ..........+.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (302)
T 4e5w_A 174 KAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLV 253 (302)
T ss_dssp EECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHH
T ss_pred ccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHH
Confidence 8765432 23456679999999888899999999999999999999988642210 000111111111
Q ss_pred HHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 491 RAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 491 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
........... ......++.+++.+||+.||++|||+.|+++.|+.+.
T Consensus 254 ~~~~~~~~~~~----------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 254 NTLKEGKRLPC----------PPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHHTTCCCCC----------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHhccCCCCC----------CCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 11111111100 0111236888999999999999999999999998764
No 121
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=3.1e-40 Score=336.54 Aligned_cols=248 Identities=19% Similarity=0.304 Sum_probs=200.4
Q ss_pred ccccccccCceEEEEEEEc-CCceEEEEEecCCCc------chHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEE
Q 047954 272 PAEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKP------LITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYK 344 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 344 (582)
..+.||+|+||.||+|... ++..||+|.+..... ...+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 16 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 95 (321)
T 2a2a_A 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILE 95 (321)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred EeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEE
Confidence 3578999999999999975 578899999864322 246789999999999999999999999999999999999
Q ss_pred eCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCC----ceEEee
Q 047954 345 FAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNE----MVLVSD 420 (582)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~----~~kl~D 420 (582)
|+++++|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|
T Consensus 96 ~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~lH~~~-------ivH~dikp~NIl~~~~~~~~~~~kl~D 162 (321)
T 2a2a_A 96 LVSGGELFDFLAQKE------SLSEEEATSFIKQILDGVNYLHTKK-------IAHFDLKPENIMLLDKNIPIPHIKLID 162 (321)
T ss_dssp CCCSCBHHHHHHTCS------CEEHHHHHHHHHHHHHHHHHHHHTT-------EECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred cCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCC-------eecCCCChHHEEEecCCCCcCCEEEcc
Confidence 999999999997432 5889999999999999999999998 99999999999999888 799999
Q ss_pred ccccccccCcc---cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcc
Q 047954 421 YGFSSLVAQPI---AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEW 497 (582)
Q Consensus 421 fG~a~~~~~~~---~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (582)
||+++...... ...+++.|+|||.+.+..++.++|||||||++|||++|+.||.... ..+. .........
T Consensus 163 fg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~----~~~~---~~~i~~~~~ 235 (321)
T 2a2a_A 163 FGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT----KQET---LANITSVSY 235 (321)
T ss_dssp CTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS----HHHH---HHHHHTTCC
T ss_pred CccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCC----HHHH---HHHHHhccc
Confidence 99998765432 3347889999999999999999999999999999999999996421 1111 111111110
Q ss_pred cccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhc
Q 047954 498 TAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547 (582)
Q Consensus 498 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 547 (582)
..++... ......+.+++.+||+.||++|||+.|+++|.+..
T Consensus 236 ---~~~~~~~-----~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~ 277 (321)
T 2a2a_A 236 ---DFDEEFF-----SHTSELAKDFIRKLLVKETRKRLTIQEALRHPWIT 277 (321)
T ss_dssp ---CCCHHHH-----TTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTS
T ss_pred ---ccChhhh-----cccCHHHHHHHHHHcCCChhhCcCHHHHhcCcccc
Confidence 0111110 01123578899999999999999999999987753
No 122
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.8e-40 Score=341.45 Aligned_cols=254 Identities=19% Similarity=0.274 Sum_probs=195.1
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCC-----CcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDL-----KPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFA 346 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 346 (582)
.+.||+|+||.||+|... ++..||+|++... .....+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 31 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 110 (345)
T 3hko_A 31 KGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELC 110 (345)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEEeCC
Confidence 578999999999999964 5678999998532 3345678999999999999999999999999999999999999
Q ss_pred CCCChHHHHhcCCCC----------------------------------CCCCccchHHHHHHHHHHHHHHHHHhccCCC
Q 047954 347 GNGNLFNRIHGGKSS----------------------------------KNRIPFRCRSRLLVARGVARALEYLHHKDKS 392 (582)
Q Consensus 347 ~~gsL~~~l~~~~~~----------------------------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ 392 (582)
++|+|.+++...... .....+++..++.++.||+.||+|||+.+
T Consensus 111 ~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-- 188 (345)
T 3hko_A 111 HGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG-- 188 (345)
T ss_dssp CSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTT--
T ss_pred CCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC--
Confidence 999999998521110 00123467778889999999999999998
Q ss_pred CCCCcceecCCCCCCeeecCCC--ceEEeeccccccccCc--------ccccccccccCCCCCCC--CCCCcchhHHHHH
Q 047954 393 RTQSAVIHGNLKSTNILLDDNE--MVLVSDYGFSSLVAQP--------IAAQRMISYKSPEYQSS--KKISRKSDVWSFG 460 (582)
Q Consensus 393 ~~~~~ivH~Dlkp~NILl~~~~--~~kl~DfG~a~~~~~~--------~~~~~~~~y~aPE~~~~--~~~~~k~DVwS~G 460 (582)
|+||||||+|||++.++ .+||+|||+++.+... ....+++.|+|||.+.+ ..++.++||||||
T Consensus 189 -----ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG 263 (345)
T 3hko_A 189 -----ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAG 263 (345)
T ss_dssp -----EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHH
T ss_pred -----ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHH
Confidence 99999999999998776 8999999999765331 23347788999998865 6789999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHH
Q 047954 461 CLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEV 540 (582)
Q Consensus 461 vvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev 540 (582)
|++|||++|+.||.... . ............. ...+.. ......+.+++.+||+.||++|||+.|+
T Consensus 264 ~il~el~~g~~pf~~~~----~---~~~~~~~~~~~~~--~~~~~~------~~~~~~~~~li~~~l~~~p~~Rps~~~~ 328 (345)
T 3hko_A 264 VLLHLLLMGAVPFPGVN----D---ADTISQVLNKKLC--FENPNY------NVLSPLARDLLSNLLNRNVDERFDAMRA 328 (345)
T ss_dssp HHHHHHHHSSCSSCCSS----H---HHHHHHHHHCCCC--TTSGGG------GGSCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred HHHHHHHHCCCCCCCCC----h---HHHHHHHHhcccc--cCCccc------ccCCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 99999999999996432 1 1222222221111 011110 0112357789999999999999999999
Q ss_pred HHHHhhcc
Q 047954 541 VSELEIIK 548 (582)
Q Consensus 541 l~~L~~i~ 548 (582)
+++.+.-.
T Consensus 329 l~hp~~~~ 336 (345)
T 3hko_A 329 LQHPWISQ 336 (345)
T ss_dssp HHSHHHHT
T ss_pred hcChhhcc
Confidence 99887543
No 123
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=5.9e-40 Score=330.03 Aligned_cols=257 Identities=15% Similarity=0.187 Sum_probs=201.1
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEE-EeCCeeEEEEEeCCCCC
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYY-FSNDEKLLVYKFAGNGN 350 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~-~~~~~~~lv~e~~~~gs 350 (582)
.+.||+|+||.||+|+. .+++.||||++..... .+.+.+|+.++.+++|++++..+.++ ...+..++||||+ +++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 90 (296)
T 3uzp_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPS 90 (296)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CCC
Confidence 46799999999999996 6788999999865332 34688999999999998888777766 4566789999999 899
Q ss_pred hHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeee---cCCCceEEeeccccccc
Q 047954 351 LFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILL---DDNEMVLVSDYGFSSLV 427 (582)
Q Consensus 351 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl---~~~~~~kl~DfG~a~~~ 427 (582)
|.+++..... .+++..++.++.||+.||+|||+++ |+||||||+|||+ +.++.+||+|||+++..
T Consensus 91 L~~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~-------ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~ 158 (296)
T 3uzp_A 91 LEDLFNFCSR-----KFSLKTVLLLADQMISRIEYIHSKN-------FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp HHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred HHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHhCC-------eeeCCCCHHHeEEecCCCCCeEEEeeCCCcccc
Confidence 9999974332 4889999999999999999999998 9999999999999 48889999999999876
Q ss_pred cCc-----------ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhc
Q 047954 428 AQP-----------IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREE 496 (582)
Q Consensus 428 ~~~-----------~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 496 (582)
... ....++..|+|||.+.+..++.++|||||||++|||++|+.||...... ........+.......
T Consensus 159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~ 237 (296)
T 3uzp_A 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA-TKRQKYERISEKKMST 237 (296)
T ss_dssp BCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCS-SSSSHHHHHHHHHHHS
T ss_pred cccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCch-hhhhhhhhhcccccCC
Confidence 443 2334778899999999999999999999999999999999999754322 1222222222211111
Q ss_pred ccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCCCCcc
Q 047954 497 WTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTESTEE 555 (582)
Q Consensus 497 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 555 (582)
.... .. .....++.+++.+||+.||++|||+.+|++.|+.+........
T Consensus 238 ~~~~-~~---------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~ 286 (296)
T 3uzp_A 238 PIEV-LC---------KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSY 286 (296)
T ss_dssp CHHH-HT---------TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCCS
T ss_pred chHH-HH---------hhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCcc
Confidence 0000 00 0112358889999999999999999999999999876665443
No 124
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.1e-40 Score=333.05 Aligned_cols=248 Identities=21% Similarity=0.358 Sum_probs=197.1
Q ss_pred ccccccccCceEEEEEEEcCC----ceEEEEEecCC-CcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeC
Q 047954 272 PAEGLGKGIFGNSYKALLEGR----APVVVKRLRDL-KPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFA 346 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~~~~----~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 346 (582)
..+.||+|+||.||+|...+. ..||+|.+... .....+.+.+|+.++++++||||+++++++.. +..++||||+
T Consensus 16 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~ 94 (281)
T 3cc6_A 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELY 94 (281)
T ss_dssp EEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred EEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEEEecC
Confidence 357899999999999986532 35999998754 33456789999999999999999999999764 4578999999
Q ss_pred CCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccc
Q 047954 347 GNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSL 426 (582)
Q Consensus 347 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~ 426 (582)
++++|.+++.... ..+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 95 ~~~~L~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~-------i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 95 PYGELGHYLERNK-----NSLKVLTLVLYSLQICKAMAYLESIN-------CVHRDIAVRNILVASPECVKLGDFGLSRY 162 (281)
T ss_dssp TTCBHHHHHHHHT-----TTCCHHHHHHHHHHHHHHHHHHHHTT-------CCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred CCCCHHHHHHhcc-----ccCCHHHHHHHHHHHHHHHHHHHHCC-------cccCCCccceEEECCCCcEEeCccCCCcc
Confidence 9999999997532 24888999999999999999999998 99999999999999999999999999987
Q ss_pred ccCcc-----cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHHHHHHhhccccc
Q 047954 427 VAQPI-----AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAE 500 (582)
Q Consensus 427 ~~~~~-----~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (582)
..... ...++..|+|||.+.+..++.++||||||+++|||+| |+.||.... ..+....+.. .....
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~----~~~~~~~~~~----~~~~~ 234 (281)
T 3cc6_A 163 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLE----NKDVIGVLEK----GDRLP 234 (281)
T ss_dssp C---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC----GGGHHHHHHH----TCCCC
T ss_pred cccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCC----hHHHHHHHhc----CCCCC
Confidence 65432 2335678999999988899999999999999999998 999996432 2223222211 11110
Q ss_pred ccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccC
Q 047954 501 IFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVT 550 (582)
Q Consensus 501 ~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 550 (582)
..+ .....+.+++.+||+.||++|||+.|++++|+.+...
T Consensus 235 ~~~----------~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 235 KPD----------LCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp CCT----------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCC----------CCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 000 0112578899999999999999999999999988654
No 125
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.8e-40 Score=330.66 Aligned_cols=247 Identities=20% Similarity=0.318 Sum_probs=199.0
Q ss_pred cccccccCceEEEEEEEcC-CceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCCh
Q 047954 273 AEGLGKGIFGNSYKALLEG-RAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNL 351 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 351 (582)
.+.||+|+||.||+|.... +..||+|++........+.+.+|++++++++||||+++++++.+....++||||+++++|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 93 (277)
T 3f3z_A 14 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGEL 93 (277)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred eeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCcH
Confidence 4679999999999999764 568999999765555678899999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeee---cCCCceEEeecccccccc
Q 047954 352 FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILL---DDNEMVLVSDYGFSSLVA 428 (582)
Q Consensus 352 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl---~~~~~~kl~DfG~a~~~~ 428 (582)
.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||++....
T Consensus 94 ~~~~~~~~------~~~~~~~~~i~~~i~~~l~~lH~~~-------i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~ 160 (277)
T 3f3z_A 94 FERVVHKR------VFRESDAARIMKDVLSAVAYCHKLN-------VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 160 (277)
T ss_dssp HHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCSGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred HHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------ccCCCCCHHHEEEecCCCCCcEEEEecccceecc
Confidence 99886532 4889999999999999999999998 9999999999999 788999999999997765
Q ss_pred Cc---ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccchh
Q 047954 429 QP---IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSE 505 (582)
Q Consensus 429 ~~---~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 505 (582)
.. ....+++.|+|||.+.+. ++.++||||||+++|||++|+.||.... ..+.... ....... .....
T Consensus 161 ~~~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~----~~~~~~~----~~~~~~~-~~~~~ 230 (277)
T 3f3z_A 161 PGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPT----DSEVMLK----IREGTFT-FPEKD 230 (277)
T ss_dssp TTSCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHH----HHHCCCC-CCHHH
T ss_pred CccchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCC----HHHHHHH----HHhCCCC-CCchh
Confidence 43 234477889999988654 8999999999999999999999996432 1111111 1111110 00000
Q ss_pred hhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 506 ISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 506 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
.......+.+++.+||+.||++|||+.|+++|.+.-.
T Consensus 231 ------~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 267 (277)
T 3f3z_A 231 ------WLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEK 267 (277)
T ss_dssp ------HTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHH
T ss_pred ------hhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhc
Confidence 0011236788999999999999999999999877543
No 126
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=6.4e-41 Score=341.48 Aligned_cols=255 Identities=19% Similarity=0.308 Sum_probs=201.7
Q ss_pred ccccccccCceEEEEEEEc------CCceEEEEEecCCC-cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEE
Q 047954 272 PAEGLGKGIFGNSYKALLE------GRAPVVVKRLRDLK-PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYK 344 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 344 (582)
..+.||+|+||.||+|... .+..||||.+.... ......+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 108 (322)
T 1p4o_A 29 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 108 (322)
T ss_dssp EEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEE
Confidence 3578999999999999864 36789999997543 2344578999999999999999999999999999999999
Q ss_pred eCCCCChHHHHhcCCC----CCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEee
Q 047954 345 FAGNGNLFNRIHGGKS----SKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSD 420 (582)
Q Consensus 345 ~~~~gsL~~~l~~~~~----~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~D 420 (582)
|+++|+|.+++..... ......+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|
T Consensus 109 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-------i~H~dikp~NIli~~~~~~kl~D 181 (322)
T 1p4o_A 109 LMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-------FVHRDLAARNCMVAEDFTVKIGD 181 (322)
T ss_dssp CCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT-------CBCSCCSGGGEEECTTCCEEECC
T ss_pred eCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-------CccCCCccceEEEcCCCeEEECc
Confidence 9999999999875321 001124688999999999999999999998 99999999999999999999999
Q ss_pred ccccccccCcc------cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHHHHHH
Q 047954 421 YGFSSLVAQPI------AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAV 493 (582)
Q Consensus 421 fG~a~~~~~~~------~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~ 493 (582)
||+++...... ...+++.|+|||.+.+..++.++||||||+++|||+| |+.||... ....+... .
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~----~~~~~~~~----~ 253 (322)
T 1p4o_A 182 FGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL----SNEQVLRF----V 253 (322)
T ss_dssp TTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS----CHHHHHHH----H
T ss_pred CccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccC----CHHHHHHH----H
Confidence 99998664332 2234677999999988899999999999999999999 88998542 11122211 1
Q ss_pred hhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCC
Q 047954 494 REEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTE 551 (582)
Q Consensus 494 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 551 (582)
......... ......+.+++.+||+.||++|||+.|++++|+.+....
T Consensus 254 ~~~~~~~~~----------~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~ 301 (322)
T 1p4o_A 254 MEGGLLDKP----------DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 301 (322)
T ss_dssp HTTCCCCCC----------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTT
T ss_pred HcCCcCCCC----------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccC
Confidence 111111110 011225788999999999999999999999999886533
No 127
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=4.9e-41 Score=335.13 Aligned_cols=248 Identities=25% Similarity=0.422 Sum_probs=200.3
Q ss_pred cccccccCceEEEEEEEcCCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCChH
Q 047954 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLF 352 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 352 (582)
.+.||+|+||.||+|...++..||+|++.... ...+.+.+|++++++++||||+++++++. .+..++||||+++++|.
T Consensus 18 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~ 95 (279)
T 1qpc_A 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLV 95 (279)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHH
T ss_pred eeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCCCCCHH
Confidence 46799999999999999888899999997543 34678999999999999999999999986 45689999999999999
Q ss_pred HHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccCcc-
Q 047954 353 NRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI- 431 (582)
Q Consensus 353 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~~~- 431 (582)
+++.... ...+++..++.++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++......
T Consensus 96 ~~l~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~-------i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 164 (279)
T 1qpc_A 96 DFLKTPS----GIKLTINKLLDMAAQIAEGMAFIEERN-------YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 164 (279)
T ss_dssp HHTTSHH----HHTCCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE
T ss_pred HHHhcCC----CCCCCHHHHHHHHHHHHHHHHHHHHCC-------eeccCCCHhhEEEcCCCCEEECCCcccccccCccc
Confidence 9986421 124888999999999999999999998 9999999999999999999999999998765432
Q ss_pred ----cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHHHHHHhhcccccccchhh
Q 047954 432 ----AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEI 506 (582)
Q Consensus 432 ----~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 506 (582)
...++..|+|||.+.+..++.++||||||+++|||++ |+.||... ...++...+ ........ ..
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~----~~~~~~~~~----~~~~~~~~-~~-- 233 (279)
T 1qpc_A 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM----TNPEVIQNL----ERGYRMVR-PD-- 233 (279)
T ss_dssp ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTC----CHHHHHHHH----HTTCCCCC-CT--
T ss_pred ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCccc----CHHHHHHHH----hcccCCCC-cc--
Confidence 2234567999999988889999999999999999999 99998642 112222221 11111110 00
Q ss_pred hhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCC
Q 047954 507 SVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTE 551 (582)
Q Consensus 507 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 551 (582)
....++.+++.+||+.||++|||+.++++.|+.+....
T Consensus 234 -------~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 271 (279)
T 1qpc_A 234 -------NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271 (279)
T ss_dssp -------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred -------cccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhc
Confidence 11236788999999999999999999999999886443
No 128
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=7.7e-41 Score=334.67 Aligned_cols=246 Identities=16% Similarity=0.266 Sum_probs=197.3
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCC--CcchHHHHHHHHHHHhcC-CCCCccccceEEEeCCeeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDL--KPLITEEFRKQLLVIADQ-KHPNLLPLLAYYFSNDEKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 348 (582)
.+.||+|+||.||+|... +++.||+|++... .......+.+|+..+.++ +||||+++++++.+.+..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 95 (289)
T 1x8b_A 16 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNG 95 (289)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred hhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCC
Confidence 467999999999999976 6889999998753 233456788999999998 999999999999999999999999999
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecC----------------
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDD---------------- 412 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~---------------- 412 (582)
|+|.+++...... ...+++..++.++.||+.||+|||+++ |+||||||+|||++.
T Consensus 96 ~~L~~~l~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~-------ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 96 GSLADAISENYRI--MSYFKEAELKDLLLQVGRGLRYIHSMS-------LVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp CBHHHHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCSGGGEEEC-----------------
T ss_pred CcHHHHHHhhccc--ccCCCHHHHHHHHHHHHHHHHHHHhCC-------EeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 9999999753211 124889999999999999999999998 999999999999984
Q ss_pred ---CCceEEeeccccccccCcccccccccccCCCCCCCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHH
Q 047954 413 ---NEMVLVSDYGFSSLVAQPIAAQRMISYKSPEYQSSK-KISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSW 488 (582)
Q Consensus 413 ---~~~~kl~DfG~a~~~~~~~~~~~~~~y~aPE~~~~~-~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~ 488 (582)
...+||+|||.+..........++..|+|||.+.+. .++.++|||||||++|||++|..|+... ....
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-------~~~~- 238 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG-------DQWH- 238 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS-------HHHH-
T ss_pred cCCceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch-------hHHH-
Confidence 447999999999888777667789999999998765 5678999999999999999998776321 1111
Q ss_pred HHHHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 489 VLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 489 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
.........+.. .....+.+++.+||+.||++|||+.|+++|.+...
T Consensus 239 ---~~~~~~~~~~~~----------~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~ 285 (289)
T 1x8b_A 239 ---EIRQGRLPRIPQ----------VLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLS 285 (289)
T ss_dssp ---HHHTTCCCCCSS----------CCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC--
T ss_pred ---HHHcCCCCCCCc----------ccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhh
Confidence 111111111110 01125788999999999999999999999877543
No 129
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=5.9e-41 Score=371.35 Aligned_cols=243 Identities=23% Similarity=0.367 Sum_probs=195.9
Q ss_pred ccccccCceEEEEEEEc---CCceEEEEEecCCC--cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCC
Q 047954 274 EGLGKGIFGNSYKALLE---GRAPVVVKRLRDLK--PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGN 348 (582)
Q Consensus 274 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 348 (582)
+.||+|+||.||+|.+. .+..||||+++... ....+++.+|+.+|++++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999753 45689999997532 3346789999999999999999999999964 568899999999
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccccc
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~ 428 (582)
|+|.+++.... .+++..++.|+.||+.||+|||+++ ||||||||+|||++.++.+||+|||+++.+.
T Consensus 454 g~L~~~l~~~~------~l~~~~~~~i~~qi~~~L~yLH~~~-------iiHrDLkp~NILl~~~~~~kL~DFGla~~~~ 520 (635)
T 4fl3_A 454 GPLNKYLQQNR------HVKDKNIIELVHQVSMGMKYLEESN-------FVHRDLAARNVLLVTQHYAKISDFGLSKALR 520 (635)
T ss_dssp EEHHHHHHHCT------TCCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCSGGGEEEEETTEEEECCTTHHHHTT
T ss_pred CCHHHHHhhCC------CCCHHHHHHHHHHHHHHHHHHHHCC-------EeCCCCChHhEEEeCCCCEEEEEcCCccccc
Confidence 99999997542 4889999999999999999999998 9999999999999999999999999998764
Q ss_pred Ccc-------cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHHHHHHhhccccc
Q 047954 429 QPI-------AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAE 500 (582)
Q Consensus 429 ~~~-------~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (582)
... ...+++.|+|||++.+..++.++|||||||++|||+| |+.||... ...++...+ .......
T Consensus 521 ~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~----~~~~~~~~i----~~~~~~~ 592 (635)
T 4fl3_A 521 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM----KGSEVTAML----EKGERMG 592 (635)
T ss_dssp C-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC----CHHHHHHHH----HTTCCCC
T ss_pred cCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC----CHHHHHHHH----HcCCCCC
Confidence 332 2234577999999998899999999999999999998 99999643 222222222 2221111
Q ss_pred ccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 501 IFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 501 ~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
.. .....++.+++.+||+.||++||++.+|++.|+.+.
T Consensus 593 ~p----------~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 630 (635)
T 4fl3_A 593 CP----------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 630 (635)
T ss_dssp CC----------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred CC----------CCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 11 111236888999999999999999999999998764
No 130
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.4e-40 Score=332.35 Aligned_cols=242 Identities=24% Similarity=0.391 Sum_probs=196.6
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEe----------------
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS---------------- 335 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~---------------- 335 (582)
.+.||+|+||.||+|... +++.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (284)
T 2a19_B 16 IELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSK 91 (284)
T ss_dssp EEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCE
T ss_pred eeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccC
Confidence 467999999999999976 78899999996543 357789999999999999999999865
Q ss_pred CCeeEEEEEeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCc
Q 047954 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM 415 (582)
Q Consensus 336 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~ 415 (582)
....++||||+++|+|.+++..... ..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.
T Consensus 92 ~~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~-------i~H~dlkp~Nil~~~~~~ 160 (284)
T 2a19_B 92 TKCLFIQMEFCDKGTLEQWIEKRRG----EKLDKVLALELFEQITKGVDYIHSKK-------LINRDLKPSNIFLVDTKQ 160 (284)
T ss_dssp EEEEEEEECCCCSCBHHHHHHHGGG----SCCCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCSGGGEEEEETTE
T ss_pred cceEEEEEeccCCCCHHHHHhhccC----CCCCHHHHHHHHHHHHHHHHHHHhCC-------eeeccCCHHHEEEcCCCC
Confidence 3457899999999999999975432 25889999999999999999999998 999999999999999999
Q ss_pred eEEeeccccccccCc---ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHH
Q 047954 416 VLVSDYGFSSLVAQP---IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRA 492 (582)
Q Consensus 416 ~kl~DfG~a~~~~~~---~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~ 492 (582)
+||+|||+++..... ....++..|+|||.+.+..++.++||||||+++|||++|..|+.. . .. ....
T Consensus 161 ~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~------~---~~-~~~~ 230 (284)
T 2a19_B 161 VKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFE------T---SK-FFTD 230 (284)
T ss_dssp EEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHH------H---HH-HHHH
T ss_pred EEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchh------H---HH-HHHH
Confidence 999999999876543 234477899999999988999999999999999999999988731 0 11 1111
Q ss_pred HhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCCC
Q 047954 493 VREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTES 552 (582)
Q Consensus 493 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 552 (582)
.........++ ..+.+++.+||+.||++|||+.|++++|+.++....
T Consensus 231 ~~~~~~~~~~~-------------~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 231 LRDGIISDIFD-------------KKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp HHTTCCCTTSC-------------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred hhcccccccCC-------------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 11221111111 246788999999999999999999999999876544
No 131
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=2.9e-41 Score=341.91 Aligned_cols=260 Identities=19% Similarity=0.312 Sum_probs=194.9
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCCC-----cchHHHHHHHHHHHhcC---CCCCccccceEEEeCC-----e
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDLK-----PLITEEFRKQLLVIADQ---KHPNLLPLLAYYFSND-----E 338 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l---~H~niv~l~~~~~~~~-----~ 338 (582)
.+.||+|+||+||+|+. .+++.||||++.... ......+.+|+.+++++ +||||+++++++.... .
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~ 93 (308)
T 3g33_A 14 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIK 93 (308)
T ss_dssp EEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEE
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCcee
Confidence 46799999999999995 567889999986322 12234566777777665 5999999999998765 4
Q ss_pred eEEEEEeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEE
Q 047954 339 KLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLV 418 (582)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl 418 (582)
.++||||+. |+|.+++..... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||
T Consensus 94 ~~lv~e~~~-~~L~~~~~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~-------ivH~Dlkp~Nil~~~~~~~kl 161 (308)
T 3g33_A 94 VTLVFEHVD-QDLRTYLDKAPP----PGLPAETIKDLMRQFLRGLDFLHANC-------IVHRDLKPENILVTSGGTVKL 161 (308)
T ss_dssp EEEEEECCC-CBHHHHHHTCCT----TCSCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCCTTTEEECTTSCEEE
T ss_pred EEEEehhhh-cCHHHHHhhccC----CCCCHHHHHHHHHHHHHHHHHHHHCC-------cccCCCCHHHEEEcCCCCEEE
Confidence 789999996 699999976432 24899999999999999999999998 999999999999999999999
Q ss_pred eeccccccccCcc---cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhh
Q 047954 419 SDYGFSSLVAQPI---AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVRE 495 (582)
Q Consensus 419 ~DfG~a~~~~~~~---~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 495 (582)
+|||+++...... ...+|+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+....+......
T Consensus 162 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~----~~~~~~~i~~~~~~ 237 (308)
T 3g33_A 162 ADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS----EADQLGKIFDLIGL 237 (308)
T ss_dssp CSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSS----HHHHHHHHHHHHCC
T ss_pred eeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHHHhCC
Confidence 9999998765432 3356889999999988999999999999999999999999996432 22222222222211
Q ss_pred ----cccccccchh--hh------hhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 496 ----EWTAEIFDSE--IS------VQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 496 ----~~~~~~~d~~--~~------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
.|......+. +. ......+...++.+++.+||+.||++|||+.|+++|.|...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~ 302 (308)
T 3g33_A 238 PPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 302 (308)
T ss_dssp CCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC--
T ss_pred CChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccC
Confidence 1110000000 00 00000111236788999999999999999999999887554
No 132
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=2.6e-40 Score=337.98 Aligned_cols=250 Identities=19% Similarity=0.280 Sum_probs=197.8
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCC--CcchHHHHHHHHHHHhcC-CCCCccccceEEEeCCeeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDL--KPLITEEFRKQLLVIADQ-KHPNLLPLLAYYFSNDEKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 348 (582)
.+.||+|+||.||+|... +++.||+|++... .......+.+|+.++.++ .||||+++++++...+..++||||+++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~ 113 (327)
T 3lm5_A 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAG 113 (327)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred cceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCC
Confidence 478999999999999965 5789999998643 234467899999999998 569999999999999999999999999
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecC---CCceEEeeccccc
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDD---NEMVLVSDYGFSS 425 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~---~~~~kl~DfG~a~ 425 (582)
|+|.+++..... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++
T Consensus 114 ~~L~~~~~~~~~----~~~~~~~~~~i~~ql~~~L~~LH~~g-------ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~ 182 (327)
T 3lm5_A 114 GEIFSLCLPELA----EMVSENDVIRLIKQILEGVYYLHQNN-------IVHLDLKPQNILLSSIYPLGDIKIVDFGMSR 182 (327)
T ss_dssp EEGGGGGSSCC-----CCCCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCCGGGEEESCBTTBCCEEECCGGGCE
T ss_pred CcHHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHCC-------eecCcCChHHEEEecCCCCCcEEEeeCcccc
Confidence 999999864322 25889999999999999999999998 999999999999998 7899999999998
Q ss_pred cccCcc---cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhccccccc
Q 047954 426 LVAQPI---AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIF 502 (582)
Q Consensus 426 ~~~~~~---~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (582)
...... ...+++.|+|||++.+..++.++|||||||++|||++|+.||.... .......+... ......+.
T Consensus 183 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~----~~~~~~~i~~~-~~~~~~~~- 256 (327)
T 3lm5_A 183 KIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGED----NQETYLNISQV-NVDYSEET- 256 (327)
T ss_dssp EC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHHHHT-CCCCCTTT-
T ss_pred ccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----chHHHHHHHhc-ccccCchh-
Confidence 765432 3357889999999999999999999999999999999999996422 11111111110 00101100
Q ss_pred chhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 503 DSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 503 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
.......+.+++.+||+.||++|||++|++++.+.-.
T Consensus 257 ---------~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~ 293 (327)
T 3lm5_A 257 ---------FSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQ 293 (327)
T ss_dssp ---------TTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCC
T ss_pred ---------hcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhcc
Confidence 0011235778999999999999999999999987543
No 133
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.5e-40 Score=341.56 Aligned_cols=255 Identities=20% Similarity=0.310 Sum_probs=197.4
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCCCcchHHHHHHHHHHHhcCC-----CCCccccceEEEeCCeeEEEEEeC
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDLKPLITEEFRKQLLVIADQK-----HPNLLPLLAYYFSNDEKLLVYKFA 346 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----H~niv~l~~~~~~~~~~~lv~e~~ 346 (582)
.+.||+|+||.||+|.. .++..||||+++.. ....+.+..|+.++.++. ||||+++++++...+..++||||+
T Consensus 40 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 118 (360)
T 3llt_A 40 IRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL 118 (360)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC
T ss_pred EEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC
Confidence 46799999999999997 46788999999642 334567788999999886 999999999999999999999999
Q ss_pred CCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecC--------------
Q 047954 347 GNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDD-------------- 412 (582)
Q Consensus 347 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~-------------- 412 (582)
+++|.+++...... .+++..++.++.||+.||+|||+.+ |+||||||+|||++.
T Consensus 119 -~~~L~~~~~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~-------ivHrDlkp~NIll~~~~~~~~~~~~~~~~ 186 (360)
T 3llt_A 119 -GPSLYEIITRNNYN----GFHIEDIKLYCIEILKALNYLRKMS-------LTHTDLKPENILLDDPYFEKSLITVRRVT 186 (360)
T ss_dssp -CCBHHHHHHHTTTC----CCCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCSGGGEEESCTTCCEEEEEEECTT
T ss_pred -CCCHHHHHHhcCCC----CCCHHHHHHHHHHHHHHHHHHHHCC-------eeeCCCCcccEEEccccccccccchhccc
Confidence 89999999865422 4888999999999999999999998 999999999999975
Q ss_pred -----------CCceEEeeccccccccCc-ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCC
Q 047954 413 -----------NEMVLVSDYGFSSLVAQP-IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGI 480 (582)
Q Consensus 413 -----------~~~~kl~DfG~a~~~~~~-~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~ 480 (582)
++.+||+|||+++..... ....+++.|+|||++.+..++.++|||||||++|||+||+.||....
T Consensus 187 ~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--- 263 (360)
T 3llt_A 187 DGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHE--- 263 (360)
T ss_dssp TCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSS---
T ss_pred ccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCc---
Confidence 788999999999876543 34457889999999999999999999999999999999999996432
Q ss_pred CccchHHHHHHHHhhcccccc------------cchh-----hhhhhch---------------HHHHHHHHHHHHHccc
Q 047954 481 NGADLCSWVLRAVREEWTAEI------------FDSE-----ISVQRSA---------------AHGMLKLLQVAIQCCN 528 (582)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~------------~d~~-----~~~~~~~---------------~~~~~~l~~l~~~Cl~ 528 (582)
..+....+...... ..... .+.. ....... ......+.+++.+||+
T Consensus 264 -~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~ 341 (360)
T 3llt_A 264 -HMEHLAMMESIIQP-IPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQ 341 (360)
T ss_dssp -HHHHHHHHHHHTCC-CCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCC
T ss_pred -HHHHHHHHHHhcCC-CCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhc
Confidence 12222222111100 00000 0000 0000000 0001457799999999
Q ss_pred CCCCCCCChHHHHHHHh
Q 047954 529 KSPEKRPEMAEVVSELE 545 (582)
Q Consensus 529 ~dP~~RPs~~evl~~L~ 545 (582)
.||++|||+.|+++|.|
T Consensus 342 ~dP~~Rpta~elL~hp~ 358 (360)
T 3llt_A 342 IDPTLRPSPAELLKHKF 358 (360)
T ss_dssp SSGGGSCCHHHHTTSGG
T ss_pred CChhhCCCHHHHhcCcc
Confidence 99999999999998765
No 134
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=343.12 Aligned_cols=255 Identities=18% Similarity=0.231 Sum_probs=191.3
Q ss_pred cccccccCceEEEEEEEc----CCceEEEEEecCCCcch-----------HHHHHHHHHHHhcCCCCCccccceEEEe--
Q 047954 273 AEGLGKGIFGNSYKALLE----GRAPVVVKRLRDLKPLI-----------TEEFRKQLLVIADQKHPNLLPLLAYYFS-- 335 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~-----------~~~~~~e~~~l~~l~H~niv~l~~~~~~-- 335 (582)
.+.||+|+||.||+|... .+..||||+........ .+.+.+|+..+..++||||+++++++..
T Consensus 42 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~ 121 (345)
T 2v62_A 42 GKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEF 121 (345)
T ss_dssp EEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEES
T ss_pred EeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeeccccccc
Confidence 467999999999999975 56789999986543211 1246678889999999999999999988
Q ss_pred --CCeeEEEEEeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCC
Q 047954 336 --NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDN 413 (582)
Q Consensus 336 --~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~ 413 (582)
....++||||+ +++|.+++.... .+++..++.++.||+.||+|||+.+ |+||||||+|||++.+
T Consensus 122 ~~~~~~~lv~e~~-~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~LH~~~-------ivH~Dlkp~NIll~~~ 187 (345)
T 2v62_A 122 KGRSYRFMVMERL-GIDLQKISGQNG------TFKKSTVLQLGIRMLDVLEYIHENE-------YVHGDIKAANLLLGYK 187 (345)
T ss_dssp SSCEEEEEEEECE-EEEHHHHCBGGG------BCCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCSGGGEEEESS
T ss_pred CCCcEEEEEEecc-CCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCC-------eeCCCcCHHHEEEccC
Confidence 67889999999 999999986432 5899999999999999999999998 9999999999999988
Q ss_pred C--ceEEeeccccccccCc-----------ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCC
Q 047954 414 E--MVLVSDYGFSSLVAQP-----------IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGI 480 (582)
Q Consensus 414 ~--~~kl~DfG~a~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~ 480 (582)
+ .+||+|||+++.+... ....++..|+|||++.+..++.++|||||||++|||+||+.||.....
T Consensus 188 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~-- 265 (345)
T 2v62_A 188 NPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLK-- 265 (345)
T ss_dssp STTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTT--
T ss_pred CCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccc--
Confidence 7 9999999999766432 223467899999999998999999999999999999999999953211
Q ss_pred CccchHHHHHHHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhccc
Q 047954 481 NGADLCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKV 549 (582)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 549 (582)
................... +...........++.+++.+||+.||++|||+.+|++.|+.+..
T Consensus 266 -~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 266 -DPVAVQTAKTNLLDELPQS-----VLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp -CHHHHHHHHHHHHHTTTHH-----HHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred -ccHHHHHHHHhhcccccHH-----HHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 1111111111111111110 00000000122368889999999999999999999999998764
No 135
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=2.5e-40 Score=341.12 Aligned_cols=242 Identities=22% Similarity=0.287 Sum_probs=196.5
Q ss_pred cccccccCceEEEEEEEcC-CceEEEEEecCC---CcchHHHHHHHHHHHhcC-CCCCccccceEEEeCCeeEEEEEeCC
Q 047954 273 AEGLGKGIFGNSYKALLEG-RAPVVVKRLRDL---KPLITEEFRKQLLVIADQ-KHPNLLPLLAYYFSNDEKLLVYKFAG 347 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~ 347 (582)
.+.||+|+||.||+|+... ++.||+|+++.. .....+.+..|..++..+ +||||+++++++.+.+..++||||++
T Consensus 25 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~ 104 (353)
T 2i0e_A 25 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 104 (353)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCC
Confidence 4679999999999999764 678999998643 123456788999999987 89999999999999999999999999
Q ss_pred CCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccc
Q 047954 348 NGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV 427 (582)
Q Consensus 348 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~ 427 (582)
+|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 105 gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~g-------ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 171 (353)
T 2i0e_A 105 GGDLMYHIQQVG------RFKEPHAVFYAAEIAIGLFFLQSKG-------IIYRDLKLDNVMLDSEGHIKIADFGMCKEN 171 (353)
T ss_dssp SCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHTT-------CBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred CCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------EEeccCCHHHEEEcCCCcEEEEeCCccccc
Confidence 999999997532 4888999999999999999999998 999999999999999999999999999864
Q ss_pred cC----cccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccc
Q 047954 428 AQ----PIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFD 503 (582)
Q Consensus 428 ~~----~~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 503 (582)
.. .....+|+.|+|||++.+..++.++|||||||++|||++|+.||... +...+...+ ..... .. .
T Consensus 172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~----~~~~~~~~i---~~~~~--~~-p 241 (353)
T 2i0e_A 172 IWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE----DEDELFQSI---MEHNV--AY-P 241 (353)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCS----SHHHHHHHH---HHCCC--CC-C
T ss_pred ccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCC----CHHHHHHHH---HhCCC--CC-C
Confidence 32 22345789999999999999999999999999999999999999642 222222222 11111 00 0
Q ss_pred hhhhhhhchHHHHHHHHHHHHHcccCCCCCCCC-----hHHHHHHHhh
Q 047954 504 SEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPE-----MAEVVSELEI 546 (582)
Q Consensus 504 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~L~~ 546 (582)
. ....++.+++.+||..||++||+ ++||++|.+.
T Consensus 242 ~---------~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f 280 (353)
T 2i0e_A 242 K---------SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFF 280 (353)
T ss_dssp T---------TSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGG
T ss_pred C---------CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccc
Confidence 0 11125778999999999999995 5889888764
No 136
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=3.5e-40 Score=338.80 Aligned_cols=254 Identities=18% Similarity=0.291 Sum_probs=198.8
Q ss_pred cccccccCceEEEEEEEcCCceEEEEEecCCCcchHHHHHHHHHHHhc--CCCCCccccceEEEeCC----eeEEEEEeC
Q 047954 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIAD--QKHPNLLPLLAYYFSND----EKLLVYKFA 346 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~~~~~~~~----~~~lv~e~~ 346 (582)
.+.||+|+||.||+|+.. ++.||||++.. ...+.+.+|.+++.. ++||||+++++++.... ..++||||+
T Consensus 47 ~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~---~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~ 122 (342)
T 1b6c_B 47 QESIGKGRFGEVWRGKWR-GEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 122 (342)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEECG---GGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCC
T ss_pred EeeecCCCCcEEEEEEEc-CccEEEEEeCc---hhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeec
Confidence 568999999999999984 78899999853 345677888888877 79999999999998876 789999999
Q ss_pred CCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHh--------ccCCCCCCCcceecCCCCCCeeecCCCceEE
Q 047954 347 GNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH--------HKDKSRTQSAVIHGNLKSTNILLDDNEMVLV 418 (582)
Q Consensus 347 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl 418 (582)
++|+|.+++... .+++..++.++.|++.||+||| +.+ |+||||||+|||++.++.+||
T Consensus 123 ~~g~L~~~l~~~-------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-------ivH~Dlkp~NIll~~~~~~kL 188 (342)
T 1b6c_B 123 EHGSLFDYLNRY-------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-------IAHRDLKSKNILVKKNGTCCI 188 (342)
T ss_dssp TTCBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE-------EECSCCSGGGEEECTTSCEEE
T ss_pred CCCcHHHHHhcc-------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC-------eeeCCCCHHHEEECCCCCEEE
Confidence 999999999743 4889999999999999999999 665 999999999999999999999
Q ss_pred eeccccccccCcc--------cccccccccCCCCCCCCC------CCcchhHHHHHHHHHHHHhC----------CCCCC
Q 047954 419 SDYGFSSLVAQPI--------AAQRMISYKSPEYQSSKK------ISRKSDVWSFGCLLLELLTG----------RISTH 474 (582)
Q Consensus 419 ~DfG~a~~~~~~~--------~~~~~~~y~aPE~~~~~~------~~~k~DVwS~Gvvl~elltG----------~~P~~ 474 (582)
+|||+++...... ...++..|+|||.+.+.. ++.++|||||||++|||+|| +.||.
T Consensus 189 ~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~ 268 (342)
T 1b6c_B 189 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY 268 (342)
T ss_dssp CCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred EECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCcc
Confidence 9999997664432 234778999999987652 34789999999999999999 77876
Q ss_pred CCCCCCCccchHHHHHHHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCC
Q 047954 475 SAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTE 551 (582)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 551 (582)
..... .... ..+.......... +.+.......+....+.+++.+||+.||++|||+.||+++|+.+....
T Consensus 269 ~~~~~--~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 269 DLVPS--DPSV-EEMRKVVCEQKLR----PNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp TTSCS--SCCH-HHHHHHHTTSCCC----CCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred ccCcC--cccH-HHHHHHHHHHHhC----CCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 43321 1111 2222222221111 111111112344557889999999999999999999999999987654
No 137
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.3e-40 Score=360.60 Aligned_cols=249 Identities=23% Similarity=0.294 Sum_probs=202.1
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCC---CcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDL---KPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 348 (582)
.+.||+|+||.||+|... +++.||+|++... .......+.+|+.+|++++|||||++++++.+.+..++||||+++
T Consensus 189 ~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~g 268 (576)
T 2acx_A 189 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNG 268 (576)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCC
Confidence 467999999999999975 6889999998542 123356688999999999999999999999999999999999999
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccccc
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~ 428 (582)
|+|.+++..... ..+++..++.++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+++.+.
T Consensus 269 g~L~~~l~~~~~----~~l~e~~~~~i~~qIl~aL~yLH~~g-------IvHrDLKPeNILld~~g~vKL~DFGla~~~~ 337 (576)
T 2acx_A 269 GDLKFHIYHMGQ----AGFPEARAVFYAAEICCGLEDLHRER-------IVYRDLKPENILLDDHGHIRISDLGLAVHVP 337 (576)
T ss_dssp CBHHHHHHSSSS----CCCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred CcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHHCC-------EeccCCchheEEEeCCCCeEEEecccceecc
Confidence 999999975432 24889999999999999999999998 9999999999999999999999999998765
Q ss_pred Cc---ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccchh
Q 047954 429 QP---IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSE 505 (582)
Q Consensus 429 ~~---~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 505 (582)
.. ....+|+.|+|||++.+..++.++|||||||++|||++|+.||...........+. ..+... .... ...
T Consensus 338 ~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~----~~i~~~-~~~~-p~~ 411 (576)
T 2acx_A 338 EGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVE----RLVKEV-PEEY-SER 411 (576)
T ss_dssp TTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHH----HHHHHC-CCCC-CTT
T ss_pred cCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHH----HHhhcc-cccC-Ccc
Confidence 43 23457899999999999899999999999999999999999997543221111222 221111 1111 111
Q ss_pred hhhhhchHHHHHHHHHHHHHcccCCCCCCC-----ChHHHHHHHhhc
Q 047954 506 ISVQRSAAHGMLKLLQVAIQCCNKSPEKRP-----EMAEVVSELEII 547 (582)
Q Consensus 506 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~~i 547 (582)
...++.+|+.+||+.||++|| +++||++|.+.-
T Consensus 412 ---------~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~ 449 (576)
T 2acx_A 412 ---------FSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFK 449 (576)
T ss_dssp ---------SCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGT
T ss_pred ---------CCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhc
Confidence 112577899999999999999 789999997754
No 138
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2.3e-40 Score=331.63 Aligned_cols=248 Identities=22% Similarity=0.347 Sum_probs=192.7
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCC-cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK-PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGN 350 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 350 (582)
.+.||+|+||.||+|... ++..||+|++.... ....+.+.+|++++++++||||+++++++.+....++||||+++|+
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 106 (285)
T 3is5_A 27 KRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGE 106 (285)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCCB
T ss_pred cceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCCc
Confidence 578999999999999964 57889999986432 3456789999999999999999999999999999999999999999
Q ss_pred hHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeee---cCCCceEEeeccccccc
Q 047954 351 LFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILL---DDNEMVLVSDYGFSSLV 427 (582)
Q Consensus 351 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl---~~~~~~kl~DfG~a~~~ 427 (582)
|.+++...... ...+++..++.++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++..
T Consensus 107 L~~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~-------ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 107 LLERIVSAQAR--GKALSEGYVAELMKQMMNALAYFHSQH-------VVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp HHHHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHHTT-------CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred HHHHHHhhhhc--ccCCCHHHHHHHHHHHHHHHHHHHhCC-------EEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 99988643211 125889999999999999999999998 9999999999999 45678999999999876
Q ss_pred cCc---ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccch
Q 047954 428 AQP---IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDS 504 (582)
Q Consensus 428 ~~~---~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 504 (582)
... ....++..|+|||.+. ..++.++||||||+++|||++|+.||.... ...+.. ..............
T Consensus 178 ~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~----~~~~~~---~~~~~~~~~~~~~~ 249 (285)
T 3is5_A 178 KSDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTS----LEEVQQ---KATYKEPNYAVECR 249 (285)
T ss_dssp ---------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHH---HHHHCCCCCCC--C
T ss_pred CCcccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCC----HHHHHh---hhccCCcccccccC
Confidence 543 2344778899999875 568999999999999999999999996422 111111 11111100000000
Q ss_pred hhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhh
Q 047954 505 EISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEI 546 (582)
Q Consensus 505 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 546 (582)
....++.+++.+||+.||++|||+.|++++.+.
T Consensus 250 ---------~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f 282 (285)
T 3is5_A 250 ---------PLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWF 282 (285)
T ss_dssp ---------CCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGG
T ss_pred ---------cCCHHHHHHHHHHccCChhhCcCHHHHhcCHHh
Confidence 011257789999999999999999999988664
No 139
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.5e-40 Score=353.53 Aligned_cols=243 Identities=20% Similarity=0.327 Sum_probs=198.5
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCC---cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK---PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 348 (582)
.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.+++.++||||+++++++...+..++||||+++
T Consensus 21 ~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~g 100 (476)
T 2y94_A 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSG 100 (476)
T ss_dssp EEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSS
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCC
Confidence 467999999999999975 68899999986421 22356789999999999999999999999999999999999999
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccccc
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~ 428 (582)
|+|.+++... ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 101 g~L~~~l~~~------~~l~~~~~~~i~~qi~~aL~~LH~~g-------ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~ 167 (476)
T 2y94_A 101 GELFDYICKN------GRLDEKESRRLFQQILSGVDYCHRHM-------VVHRDLKPENVLLDAHMNAKIADFGLSNMMS 167 (476)
T ss_dssp EEHHHHTTSS------SSCCHHHHHHHHHHHHHHHHHHHTTT-------EECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred CcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCC-------CCcccccHHHEEEecCCCeEEEeccchhhcc
Confidence 9999999643 24889999999999999999999998 9999999999999999999999999998765
Q ss_pred Ccc---cccccccccCCCCCCCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccch
Q 047954 429 QPI---AAQRMISYKSPEYQSSKKI-SRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDS 504 (582)
Q Consensus 429 ~~~---~~~~~~~y~aPE~~~~~~~-~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 504 (582)
... ...+++.|+|||++.+..+ +.++|||||||++|||++|+.||.... ...+.. ........ . +
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~----~~~~~~---~i~~~~~~--~--p 236 (476)
T 2y94_A 168 DGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH----VPTLFK---KICDGIFY--T--P 236 (476)
T ss_dssp TTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS----SHHHHH---HHHTTCCC--C--C
T ss_pred ccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC----HHHHHH---HHhcCCcC--C--C
Confidence 432 3457889999999988765 789999999999999999999996432 112222 11111110 0 0
Q ss_pred hhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhc
Q 047954 505 EISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547 (582)
Q Consensus 505 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 547 (582)
. ....++.+++.+||+.||++|||+.|+++|.+..
T Consensus 237 -----~---~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~ 271 (476)
T 2y94_A 237 -----Q---YLNPSVISLLKHMLQVDPMKRATIKDIREHEWFK 271 (476)
T ss_dssp -----T---TCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHH
T ss_pred -----c---cCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhh
Confidence 0 0112577899999999999999999999987653
No 140
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=6.1e-41 Score=343.40 Aligned_cols=251 Identities=22% Similarity=0.335 Sum_probs=184.8
Q ss_pred ccccccccCceEEEEEEEc-CCceEEEEEecCCCcchHHHHHHHHHHHhcCC-CCCccccceEEEe--------CCeeEE
Q 047954 272 PAEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKPLITEEFRKQLLVIADQK-HPNLLPLLAYYFS--------NDEKLL 341 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~--------~~~~~l 341 (582)
..+.||+|+||.||+|... +++.||||++........+.+.+|+.++.++. ||||+++++++.. ....++
T Consensus 32 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~l 111 (337)
T 3ll6_A 32 VRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLL 111 (337)
T ss_dssp EEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEE
T ss_pred EEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEE
Confidence 4578999999999999964 67889999987666566678999999999996 9999999999953 334789
Q ss_pred EEEeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeec
Q 047954 342 VYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDY 421 (582)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~Df 421 (582)
||||+. |+|.+++..... ...+++..++.++.||+.||+|||+.++ +|+||||||+|||++.++.+||+||
T Consensus 112 v~e~~~-g~L~~~l~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~~-----~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 112 LTELCK-GQLVEFLKKMES---RGPLSCDTVLKIFYQTCRAVQHMHRQKP-----PIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp EEECCS-EEHHHHHHHHHT---TCSCCHHHHHHHHHHHHHHHHHHHTSSS-----CCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred EEEecC-CCHHHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHhCCC-----CEEEccCCcccEEECCCCCEEEecC
Confidence 999995 799998865221 1258999999999999999999999862 4999999999999999999999999
Q ss_pred cccccccCcc----------------cccccccccCCCCC---CCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCc
Q 047954 422 GFSSLVAQPI----------------AAQRMISYKSPEYQ---SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGING 482 (582)
Q Consensus 422 G~a~~~~~~~----------------~~~~~~~y~aPE~~---~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~ 482 (582)
|+++...... ...+++.|+|||++ .+..++.++|||||||++|||+||+.||......
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--- 259 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL--- 259 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH---
Confidence 9998765422 22367889999998 5667899999999999999999999999642211
Q ss_pred cchHHHHHHHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCCC
Q 047954 483 ADLCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTES 552 (582)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 552 (582)
..... .......+ .....+.+++.+||+.||++|||+.|++++|+.+.....
T Consensus 260 ----~~~~~----~~~~~~~~----------~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~ 311 (337)
T 3ll6_A 260 ----RIVNG----KYSIPPHD----------TQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARN 311 (337)
T ss_dssp --------------CCCCTTC----------CSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred ----HhhcC----cccCCccc----------ccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccC
Confidence 00100 00000000 001136788999999999999999999999999876443
No 141
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.1e-40 Score=355.51 Aligned_cols=244 Identities=21% Similarity=0.308 Sum_probs=190.3
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCC---CcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDL---KPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 348 (582)
.+.||+|+||.||+|... ++..||||++... .......+.+|+.++++++||||+++++++...+..++||||+++
T Consensus 153 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~ 232 (446)
T 4ejn_A 153 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG 232 (446)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCSS
T ss_pred eEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCC
Confidence 478999999999999964 6788999998642 233445678899999999999999999999999999999999999
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhc-cCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccc
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH-KDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV 427 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~ 427 (582)
|+|.+++.... .+++..+..++.||+.||+|||+ .+ |+||||||+|||++.++.+||+|||+++..
T Consensus 233 ~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~g-------iiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 233 GELFFHLSRER------VFSEDRARFYGAEIVSALDYLHSEKN-------VVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp CBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHHTC-------CCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred CcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHhhcCC-------EEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 99999987532 48899999999999999999998 77 999999999999999999999999999864
Q ss_pred cCc----ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccc
Q 047954 428 AQP----IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFD 503 (582)
Q Consensus 428 ~~~----~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 503 (582)
... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.... ...+...+ ..... .+ .
T Consensus 300 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~----~~~~~~~i---~~~~~--~~-p 369 (446)
T 4ejn_A 300 IKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD----HEKLFELI---LMEEI--RF-P 369 (446)
T ss_dssp CC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHH---HHCCC--CC-C
T ss_pred cCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCC----HHHHHHHH---HhCCC--CC-C
Confidence 332 23457889999999999999999999999999999999999996421 12222211 11111 00 0
Q ss_pred hhhhhhhchHHHHHHHHHHHHHcccCCCCCCC-----ChHHHHHHHhhcc
Q 047954 504 SEISVQRSAAHGMLKLLQVAIQCCNKSPEKRP-----EMAEVVSELEIIK 548 (582)
Q Consensus 504 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~~i~ 548 (582)
. ....++.+++.+||+.||++|| +++|+++|.+.-.
T Consensus 370 ~---------~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~ 410 (446)
T 4ejn_A 370 R---------TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG 410 (446)
T ss_dssp T---------TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred c---------cCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccC
Confidence 0 0112577899999999999999 9999999987543
No 142
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3e-40 Score=328.82 Aligned_cols=242 Identities=21% Similarity=0.305 Sum_probs=177.1
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCCC---cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDLK---PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 348 (582)
.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||||+ +
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~-~ 96 (275)
T 2eue_A 18 VKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-G 96 (275)
T ss_dssp CC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEECC-C
T ss_pred EEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehhc-C
Confidence 46799999999999985 467899999986532 234567899999999999999999999999999999999999 7
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccccc
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~ 428 (582)
++|.+++.... .+++..++.++.|++.||.|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 97 ~~l~~~~~~~~------~~~~~~~~~~~~~i~~~l~~LH~~~-------i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 163 (275)
T 2eue_A 97 NELFDYIVQRD------KMSEQEARRFFQQIISAVEYCHRHK-------IVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163 (275)
T ss_dssp EEHHHHHHTSS------SCCHHHHHHHHHHHHHHHHHHHHTT-------CCCCCCSGGGEEECTTSCEEECCSSCC----
T ss_pred CcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------CeeccCChHhEEECCCCCEEEeecccceecc
Confidence 78988886432 4889999999999999999999998 9999999999999999999999999998765
Q ss_pred Ccc---cccccccccCCCCCCCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccch
Q 047954 429 QPI---AAQRMISYKSPEYQSSKKI-SRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDS 504 (582)
Q Consensus 429 ~~~---~~~~~~~y~aPE~~~~~~~-~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 504 (582)
... ...++..|+|||.+.+..+ +.++|||||||++|||++|+.||.... ...+.. ....... .. ..
T Consensus 164 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~----~~~~~~----~~~~~~~-~~-~~ 233 (275)
T 2eue_A 164 DGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES----IPVLFK----NISNGVY-TL-PK 233 (275)
T ss_dssp -----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHH----HHHHTCC-CC-CT
T ss_pred CcccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC----HHHHHH----HHHhCCC-CC-Cc
Confidence 432 3347789999999887765 789999999999999999999996421 111111 1111110 00 00
Q ss_pred hhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhc
Q 047954 505 EISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547 (582)
Q Consensus 505 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 547 (582)
.....+.+++.+||+.||++|||+.|++++.+.-
T Consensus 234 ---------~~~~~~~~li~~~l~~dP~~Rps~~e~l~h~~f~ 267 (275)
T 2eue_A 234 ---------FLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 267 (275)
T ss_dssp ---------TSCHHHHHHHHHHSCSSGGGSCCHHHHTTCHHHH
T ss_pred ---------cCCHHHHHHHHHHhhcCHhHCCCHHHHhhCCeec
Confidence 0112577899999999999999999999987743
No 143
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=5.2e-40 Score=332.11 Aligned_cols=248 Identities=23% Similarity=0.357 Sum_probs=197.7
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCCh
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNL 351 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 351 (582)
.+.||+|+||.||+|... +++.||+|.++.......+.+.+|+.++++++||||+++++++...+..++||||+++++|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 93 (304)
T 2jam_A 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGEL 93 (304)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred eeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCccH
Confidence 467999999999999975 6788999999765544556789999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeee---cCCCceEEeecccccccc
Q 047954 352 FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILL---DDNEMVLVSDYGFSSLVA 428 (582)
Q Consensus 352 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl---~~~~~~kl~DfG~a~~~~ 428 (582)
.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||+++...
T Consensus 94 ~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~-------i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 160 (304)
T 2jam_A 94 FDRILERG------VYTEKDASLVIQQVLSAVKYLHENG-------IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ 160 (304)
T ss_dssp HHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT-------CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC
T ss_pred HHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------ccccCCCHHHEEEecCCCCCCEEEccCCcceecC
Confidence 99986532 4788999999999999999999998 9999999999999 788899999999997654
Q ss_pred Ccc--cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccchhh
Q 047954 429 QPI--AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEI 506 (582)
Q Consensus 429 ~~~--~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 506 (582)
... ...++..|+|||.+.+..++.++|||||||++|||++|+.||.... ...+.. .+...... ...+ .
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~----~~~~~~----~i~~~~~~-~~~~-~ 230 (304)
T 2jam_A 161 NGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEET----ESKLFE----KIKEGYYE-FESP-F 230 (304)
T ss_dssp CBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSC----HHHHHH----HHHHCCCC-CCTT-T
T ss_pred CCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC----HHHHHH----HHHcCCCC-CCcc-c
Confidence 432 2346789999999999999999999999999999999999996421 112221 11111110 0000 0
Q ss_pred hhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 507 SVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 507 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
......++.+++.+||+.||++|||+.|++++.+.-.
T Consensus 231 -----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~ 267 (304)
T 2jam_A 231 -----WDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDG 267 (304)
T ss_dssp -----TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHS
T ss_pred -----cccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccC
Confidence 0011235788999999999999999999999887543
No 144
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.3e-41 Score=343.16 Aligned_cols=238 Identities=21% Similarity=0.312 Sum_probs=195.8
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCCCc--------chHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEE
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDLKP--------LITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVY 343 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 343 (582)
.+.||+|+||.||+|.. .++..||||+++.... ...+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 29 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~ 108 (335)
T 3dls_A 29 MSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVM 108 (335)
T ss_dssp EEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEEE
Confidence 46799999999999985 4678899999875431 12345778999999999999999999999999999999
Q ss_pred EeCCCC-ChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecc
Q 047954 344 KFAGNG-NLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYG 422 (582)
Q Consensus 344 e~~~~g-sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG 422 (582)
||+..| +|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 109 e~~~~g~~l~~~~~~~~------~l~~~~~~~i~~qi~~~L~~LH~~~-------ivH~Dlkp~NIll~~~~~~kL~Dfg 175 (335)
T 3dls_A 109 EKHGSGLDLFAFIDRHP------RLDEPLASYIFRQLVSAVGYLRLKD-------IIHRDIKDENIVIAEDFTIKLIDFG 175 (335)
T ss_dssp ECCTTSCBHHHHHHTCC------CCCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCSGGGEEECTTSCEEECCCT
T ss_pred EeCCCCccHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCC-------eEEeccCHHHEEEcCCCcEEEeecc
Confidence 999877 9999997542 4889999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCcc---cccccccccCCCCCCCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhccc
Q 047954 423 FSSLVAQPI---AAQRMISYKSPEYQSSKKI-SRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWT 498 (582)
Q Consensus 423 ~a~~~~~~~---~~~~~~~y~aPE~~~~~~~-~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (582)
+++...... ...+++.|+|||++.+..+ +.++|||||||++|||++|+.||...... .
T Consensus 176 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------------------~ 237 (335)
T 3dls_A 176 SAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------------------V 237 (335)
T ss_dssp TCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG------------------T
T ss_pred cceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH------------------H
Confidence 998765432 3347889999999988776 88999999999999999999999642110 0
Q ss_pred ccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 499 AEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 499 ~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
...... ... ...++.+++.+||+.||++|||+.|++++.|.-.
T Consensus 238 ~~~~~~----~~~---~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~ 280 (335)
T 3dls_A 238 EAAIHP----PYL---VSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQ 280 (335)
T ss_dssp TTCCCC----SSC---CCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTC
T ss_pred hhccCC----Ccc---cCHHHHHHHHHHccCChhhCcCHHHHhcCccccC
Confidence 000000 000 1125788999999999999999999999988654
No 145
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.4e-40 Score=338.53 Aligned_cols=255 Identities=22% Similarity=0.339 Sum_probs=199.9
Q ss_pred cccccccCceEEEEEEEc-----CCceEEEEEecCCC-cchHHHHHHHHHHHhcCCCCCccccceEEEeC--CeeEEEEE
Q 047954 273 AEGLGKGIFGNSYKALLE-----GRAPVVVKRLRDLK-PLITEEFRKQLLVIADQKHPNLLPLLAYYFSN--DEKLLVYK 344 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~~lv~e 344 (582)
.+.||+|+||.||++.+. +++.||||+++... ....+.+.+|++++++++||||+++++++.+. ...++|||
T Consensus 36 ~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 115 (318)
T 3lxp_A 36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVME 115 (318)
T ss_dssp EEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEEC
T ss_pred hheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEe
Confidence 467999999999998753 57889999997543 33456789999999999999999999999884 57899999
Q ss_pred eCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccc
Q 047954 345 FAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS 424 (582)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a 424 (582)
|+++|+|.+++... .+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 116 ~~~~~~L~~~l~~~-------~~~~~~~~~i~~~l~~~l~~LH~~~-------ivH~Dikp~Nil~~~~~~~kl~Dfg~a 181 (318)
T 3lxp_A 116 YVPLGSLRDYLPRH-------SIGLAQLLLFAQQICEGMAYLHAQH-------YIHRDLAARNVLLDNDRLVKIGDFGLA 181 (318)
T ss_dssp CCTTCBHHHHGGGS-------CCCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCSGGGEEECTTCCEEECCGGGC
T ss_pred cccCCcHHHHHhhC-------CCCHHHHHHHHHHHHHHHHHHHhCC-------ccCCCCchheEEEcCCCCEEECCcccc
Confidence 99999999999643 3888999999999999999999998 999999999999999999999999999
Q ss_pred ccccCcc-------cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCC-------CCccchHHHHH
Q 047954 425 SLVAQPI-------AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQG-------INGADLCSWVL 490 (582)
Q Consensus 425 ~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~-------~~~~~~~~~~~ 490 (582)
+...... ...++..|+|||.+.+..++.++||||||+++|||+||+.||...... .........+.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (318)
T 3lxp_A 182 KAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLT 261 (318)
T ss_dssp EECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHH
T ss_pred ccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHH
Confidence 8765432 223566799999998888999999999999999999999998642110 00000000111
Q ss_pred HHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCC
Q 047954 491 RAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTE 551 (582)
Q Consensus 491 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 551 (582)
.......... .......++.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 262 ~~~~~~~~~~----------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 312 (318)
T 3lxp_A 262 ELLERGERLP----------RPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 312 (318)
T ss_dssp HHHHTTCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHhcccCCC----------CCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhh
Confidence 1111111100 01112236889999999999999999999999999886543
No 146
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=7.8e-40 Score=327.22 Aligned_cols=249 Identities=19% Similarity=0.271 Sum_probs=199.2
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCC--CcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDL--KPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNG 349 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 349 (582)
.+.||+|+||.||+|... ++..||+|++... .....+.+.+|+.++++++||||+++++++...+..++||||+++|
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 90 (284)
T 3kk8_A 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 90 (284)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred hhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCC
Confidence 467999999999999965 5788999998643 2334567889999999999999999999999999999999999999
Q ss_pred ChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCc---eEEeecccccc
Q 047954 350 NLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM---VLVSDYGFSSL 426 (582)
Q Consensus 350 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~---~kl~DfG~a~~ 426 (582)
+|.+.+.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||++..
T Consensus 91 ~l~~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~-------i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~ 157 (284)
T 3kk8_A 91 ELFEDIVARE------FYSEADASHCIQQILESIAYCHSNG-------IVHRNLKPENLLLASKAKGAAVKLADFGLAIE 157 (284)
T ss_dssp BHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred CHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------cCcCCCCHHHEEEecCCCCCcEEEeeceeeEE
Confidence 9999886532 4889999999999999999999998 999999999999986655 99999999977
Q ss_pred ccCcc---cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccc
Q 047954 427 VAQPI---AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFD 503 (582)
Q Consensus 427 ~~~~~---~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 503 (582)
..... ...++..|+|||.+.+..++.++||||||+++|+|++|+.||.... .......+ ...... ...
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~----~~~~~~~~---~~~~~~--~~~ 228 (284)
T 3kk8_A 158 VNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED----QHRLYAQI---KAGAYD--YPS 228 (284)
T ss_dssp CCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHH---HHTCCC--CCT
T ss_pred cccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCc----hhHHHHHH---Hhcccc--CCc
Confidence 65433 2457889999999999999999999999999999999999996421 11222111 111110 000
Q ss_pred hhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhccc
Q 047954 504 SEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKV 549 (582)
Q Consensus 504 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 549 (582)
+.. .....++.+++.+||+.||++|||+.|++++.+....
T Consensus 229 ~~~------~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 268 (284)
T 3kk8_A 229 PEW------DTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNR 268 (284)
T ss_dssp TTT------TTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSC
T ss_pred hhh------cccCHHHHHHHHHHcccChhhCCCHHHHhcCccccCC
Confidence 000 0111257789999999999999999999999876443
No 147
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=3e-40 Score=329.29 Aligned_cols=245 Identities=22% Similarity=0.378 Sum_probs=179.5
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCCC---cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDLK---PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 348 (582)
.+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|+.++++++||||+++++++.+.+..++||||+++
T Consensus 16 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 95 (278)
T 3cok_A 16 GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHN 95 (278)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred eeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCC
Confidence 46799999999999996 578889999985321 12346789999999999999999999999999999999999999
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccccc
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~ 428 (582)
++|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 96 ~~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~-------i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 163 (278)
T 3cok_A 96 GEMNRYLKNRV-----KPFSENEARHFMHQIITGMLYLHSHG-------ILHRDLTLSNLLLTRNMNIKIADFGLATQLK 163 (278)
T ss_dssp EEHHHHHHTCS-----SCCCHHHHHHHHHHHHHHHHHHHHTT-------EECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred CcHHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC-------eecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence 99999997542 25889999999999999999999998 9999999999999999999999999998764
Q ss_pred Cc----ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccch
Q 047954 429 QP----IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDS 504 (582)
Q Consensus 429 ~~----~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 504 (582)
.. ....++..|+|||.+.+..++.++||||||+++|||++|+.||...... .. ..... ..+...
T Consensus 164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~---~~~~~----~~~~~~- 231 (278)
T 3cok_A 164 MPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVK----NT---LNKVV----LADYEM- 231 (278)
T ss_dssp ----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC------------CC----SSCCCC-
T ss_pred CCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHH----HH---HHHHh----hcccCC-
Confidence 32 2234678899999999888999999999999999999999999653221 10 00000 000000
Q ss_pred hhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 505 EISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 505 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
.. ....++.+++.+||+.||++|||+.+++++.+...
T Consensus 232 ----~~---~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~ 268 (278)
T 3cok_A 232 ----PS---FLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSR 268 (278)
T ss_dssp ----CT---TSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC-
T ss_pred ----cc---ccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccC
Confidence 00 01125778999999999999999999999877544
No 148
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=3.8e-40 Score=333.97 Aligned_cols=256 Identities=23% Similarity=0.366 Sum_probs=194.5
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCC---CcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDL---KPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 348 (582)
.+.||+|+||.||+|.. .++..||+|++... .....+.+.+|+.++++++||||+++++++...+..++||||+++
T Consensus 37 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 116 (310)
T 2wqm_A 37 EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADA 116 (310)
T ss_dssp EEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCS
T ss_pred EEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCC
Confidence 46799999999999996 46889999999743 233456789999999999999999999999999999999999999
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccccc
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~ 428 (582)
|+|.+++...... ...+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 117 ~~L~~~l~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-------i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 117 GDLSRMIKHFKKQ--KRLIPERTVWKYFVQLCSALEHMHSRR-------VMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp CBHHHHHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHHTT-------CCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred CCHHHHHHHhccc--ccCCCHHHHHHHHHHHHHHHHHHhhCC-------eeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 9999998642211 225888999999999999999999998 9999999999999999999999999987764
Q ss_pred Ccc----cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccch
Q 047954 429 QPI----AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDS 504 (582)
Q Consensus 429 ~~~----~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 504 (582)
... ...++..|+|||.+.+..++.++||||||+++|||++|+.||.... ......... ............
T Consensus 188 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~-~~~~~~~~~~~~ 261 (310)
T 2wqm_A 188 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK-----MNLYSLCKK-IEQCDYPPLPSD 261 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC--------CCHHHHHHH-HHTTCSCCCCTT
T ss_pred CCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc-----hhHHHHHHH-hhcccCCCCccc
Confidence 432 2346788999999999999999999999999999999999996422 112222211 111111111111
Q ss_pred hhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCCC
Q 047954 505 EISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTES 552 (582)
Q Consensus 505 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 552 (582)
....++.+++.+||+.||++|||+.+|++.|+.+.....
T Consensus 262 ---------~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~ 300 (310)
T 2wqm_A 262 ---------HYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA 300 (310)
T ss_dssp ---------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred ---------ccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhh
Confidence 111257889999999999999999999999999976544
No 149
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.7e-40 Score=334.13 Aligned_cols=259 Identities=20% Similarity=0.339 Sum_probs=196.2
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCCc--chHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKP--LITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNG 349 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 349 (582)
.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+.++++++||||+++++++...+..++||||++++
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 87 (311)
T 4agu_A 8 IGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHT 87 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred eeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCc
Confidence 467999999999999975 478899999865432 23567889999999999999999999999999999999999999
Q ss_pred ChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccC
Q 047954 350 NLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ 429 (582)
Q Consensus 350 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~ 429 (582)
+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 88 ~l~~~~~~~~------~~~~~~~~~i~~~l~~~l~~lH~~~-------ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 154 (311)
T 4agu_A 88 VLHELDRYQR------GVPEHLVKSITWQTLQAVNFCHKHN-------CIHRDVKPENILITKHSVIKLCDFGFARLLTG 154 (311)
T ss_dssp HHHHHHHTSS------CCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred hHHHHHhhhc------CCCHHHHHHHHHHHHHHHHHHHHCC-------CcCCCCChhhEEEcCCCCEEEeeCCCchhccC
Confidence 9998886432 4889999999999999999999998 99999999999999999999999999987653
Q ss_pred cc----cccccccccCCCCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhh---------
Q 047954 430 PI----AAQRMISYKSPEYQSS-KKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVRE--------- 495 (582)
Q Consensus 430 ~~----~~~~~~~y~aPE~~~~-~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~--------- 495 (582)
.. ...++..|+|||.+.+ ..++.++|||||||++|||+||+.||.... ..+....+......
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 230 (311)
T 4agu_A 155 PSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKS----DVDQLYLIRKTLGDLIPRHQQVF 230 (311)
T ss_dssp -----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS----HHHHHHHHHHHHCSCCHHHHHHH
T ss_pred cccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHHHhccccccccccc
Confidence 32 2346788999998875 578999999999999999999999996432 12222222221111
Q ss_pred ---ccccc--ccchhh--hhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 496 ---EWTAE--IFDSEI--SVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 496 ---~~~~~--~~d~~~--~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
.+... +.++.. ............+.+++.+||+.||++|||++|+++|.+.-.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~ 290 (311)
T 4agu_A 231 STNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFEN 290 (311)
T ss_dssp HTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTT
T ss_pred ccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHh
Confidence 00000 000000 000000112235788999999999999999999999977544
No 150
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=349.67 Aligned_cols=268 Identities=17% Similarity=0.236 Sum_probs=204.6
Q ss_pred cccccccCceEEEEEEEcC-CceEEEEEecCCC-cchHHHHHHHHHHHhcCCCCCccccceEEEeCC--eeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALLEG-RAPVVVKRLRDLK-PLITEEFRKQLLVIADQKHPNLLPLLAYYFSND--EKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~--~~~lv~e~~~~ 348 (582)
.+.||+|+||.||+|.... ++.||||++.... ....+.+.+|++++++++||||+++++++.... ..++||||+++
T Consensus 14 ~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~ 93 (396)
T 4eut_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPC 93 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTT
T ss_pred EEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCC
Confidence 4679999999999999764 7899999997432 234577889999999999999999999998765 67999999999
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeee----cCCCceEEeecccc
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILL----DDNEMVLVSDYGFS 424 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl----~~~~~~kl~DfG~a 424 (582)
|+|.+++..... ...+++..++.++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||++
T Consensus 94 g~L~~~l~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~-------ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a 163 (396)
T 4eut_A 94 GSLYTVLEEPSN---AYGLPESEFLIVLRDVVGGMNHLRENG-------IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (396)
T ss_dssp EEHHHHTTSGGG---TTCCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCCGGGEEEEECTTSCEEEEECCGGGC
T ss_pred CCHHHHHHhhhc---ccCCCHHHHHHHHHHHHHHHHHHHHCC-------EEECCcCHHHEEEeecCCCceeEEEecCCCc
Confidence 999999975432 123889999999999999999999998 9999999999999 77888999999999
Q ss_pred ccccCcc---cccccccccCCCCCCC--------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHH
Q 047954 425 SLVAQPI---AAQRMISYKSPEYQSS--------KKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493 (582)
Q Consensus 425 ~~~~~~~---~~~~~~~y~aPE~~~~--------~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 493 (582)
+...... ...++..|+|||++.+ ..++.++|||||||++|||+||+.||..........++...+....
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~ 243 (396)
T 4eut_A 164 RELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK 243 (396)
T ss_dssp EECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSC
T ss_pred eEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCC
Confidence 8765443 3347889999998764 4678899999999999999999999975432222222222222211
Q ss_pred hhccccccc---------chhhhh-hhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccC
Q 047954 494 REEWTAEIF---------DSEISV-QRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVT 550 (582)
Q Consensus 494 ~~~~~~~~~---------d~~~~~-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 550 (582)
.......+. ...+.. ..........+.+++.+||+.||++||++.|++++++.+...
T Consensus 244 p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred CcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 111110000 000000 011234455678999999999999999999999999887643
No 151
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=8.1e-40 Score=328.87 Aligned_cols=256 Identities=15% Similarity=0.196 Sum_probs=199.0
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEE-EeCCeeEEEEEeCCCCC
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYY-FSNDEKLLVYKFAGNGN 350 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~-~~~~~~~lv~e~~~~gs 350 (582)
.+.||+|+||.||+|.. .+++.||||++.... ..+.+.+|+.++.+++|++++..++++ ...+..++||||+ +++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 90 (296)
T 4hgt_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPS 90 (296)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred eeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CCC
Confidence 46799999999999996 567889999875432 223578899999999998888877766 5567789999999 999
Q ss_pred hHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeee---cCCCceEEeeccccccc
Q 047954 351 LFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILL---DDNEMVLVSDYGFSSLV 427 (582)
Q Consensus 351 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl---~~~~~~kl~DfG~a~~~ 427 (582)
|.+++..... .+++..++.++.||+.||+|||+++ |+||||||+|||+ +.++.+||+|||+++..
T Consensus 91 L~~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~~-------ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~ 158 (296)
T 4hgt_A 91 LEDLFNFCSR-----KFSLKTVLLLADQMISRIEYIHSKN-------FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp HHHHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCSGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred HHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC-------eecCCCCHHHeeeeccCCCCeEEEecCccceec
Confidence 9999975332 4889999999999999999999998 9999999999999 78899999999999876
Q ss_pred cCcc-----------cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhc
Q 047954 428 AQPI-----------AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREE 496 (582)
Q Consensus 428 ~~~~-----------~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 496 (582)
.... ...++..|+|||.+.+..++.++|||||||++|||++|+.||......... .....+.......
T Consensus 159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~ 237 (296)
T 4hgt_A 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR-QKYERISEKKMST 237 (296)
T ss_dssp BCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS-SHHHHHHHHHHHS
T ss_pred cCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhh-hhhhhhhcccccc
Confidence 4432 334678999999999999999999999999999999999999764332221 2222221111110
Q ss_pred ccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCCCCc
Q 047954 497 WTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTESTE 554 (582)
Q Consensus 497 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 554 (582)
... ... .....++.+++.+||+.||++|||+.+|++.|+.+.......
T Consensus 238 ~~~-~~~---------~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~ 285 (296)
T 4hgt_A 238 PIE-VLC---------KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFS 285 (296)
T ss_dssp CHH-HHT---------TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCC
T ss_pred hhh-hhh---------ccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCC
Confidence 000 000 011236888999999999999999999999999987655543
No 152
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.9e-40 Score=338.89 Aligned_cols=256 Identities=22% Similarity=0.374 Sum_probs=201.2
Q ss_pred ccccccccCceEEEEEEE-----cCCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCC--eeEEEEE
Q 047954 272 PAEGLGKGIFGNSYKALL-----EGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSND--EKLLVYK 344 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~--~~~lv~e 344 (582)
..+.||+|+||.||+|.+ .++..||||++........+.+.+|+.++++++||||+++++++...+ ..++|||
T Consensus 45 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 124 (326)
T 2w1i_A 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 124 (326)
T ss_dssp EEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEEC
T ss_pred eeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEE
Confidence 357899999999999984 367889999998766666778999999999999999999999987654 6799999
Q ss_pred eCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccc
Q 047954 345 FAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS 424 (582)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a 424 (582)
|+++|+|.+++..... .+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 125 ~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~-------ivH~dikp~NIli~~~~~~kL~Dfg~~ 192 (326)
T 2w1i_A 125 YLPYGSLRDYLQKHKE-----RIDHIKLLQYTSQICKGMEYLGTKR-------YIHRDLATRNILVENENRVKIGDFGLT 192 (326)
T ss_dssp CCTTCBHHHHHHHSTT-----SSCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred CCCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHhCC-------EeccCCCcceEEEcCCCcEEEecCcch
Confidence 9999999999976432 4889999999999999999999998 999999999999999999999999999
Q ss_pred ccccCcc-------cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC--------CCCccchHHHH
Q 047954 425 SLVAQPI-------AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQ--------GINGADLCSWV 489 (582)
Q Consensus 425 ~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~--------~~~~~~~~~~~ 489 (582)
+...... ...++..|+|||.+.+..++.++||||||+++|||+||+.|+..... ..........+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (326)
T 2w1i_A 193 KVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 272 (326)
T ss_dssp EECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHH
T ss_pred hhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHH
Confidence 8765432 22345679999999888899999999999999999999998853210 00001111111
Q ss_pred HHHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhccc
Q 047954 490 LRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKV 549 (582)
Q Consensus 490 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 549 (582)
............ ......++.+++.+||+.||++|||+.|+++.|+.++.
T Consensus 273 ~~~~~~~~~~~~----------~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 273 IELLKNNGRLPR----------PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp HHHHHTTCCCCC----------CTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHhhcCCCCCC----------CCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 111111111100 01112368889999999999999999999999998764
No 153
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.8e-40 Score=333.38 Aligned_cols=244 Identities=23% Similarity=0.368 Sum_probs=195.4
Q ss_pred cccccCceEEEEEEEc---CCceEEEEEecCCC--cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCC
Q 047954 275 GLGKGIFGNSYKALLE---GRAPVVVKRLRDLK--PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNG 349 (582)
Q Consensus 275 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 349 (582)
.||+|+||.||+|.+. .+..||||+++... ....+.+.+|+.++++++||||+++++++ ..+..++||||++++
T Consensus 24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~ 102 (291)
T 1xbb_A 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELG 102 (291)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred ccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCCC
Confidence 7999999999999653 35789999997542 23357899999999999999999999999 567789999999999
Q ss_pred ChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccC
Q 047954 350 NLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ 429 (582)
Q Consensus 350 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~ 429 (582)
+|.+++.... .+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 103 ~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~LH~~~-------i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (291)
T 1xbb_A 103 PLNKYLQQNR------HVKDKNIIELVHQVSMGMKYLEESN-------FVHRDLAARNVLLVTQHYAKISDFGLSKALRA 169 (291)
T ss_dssp EHHHHHHHCT------TCCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred CHHHHHHhCc------CCCHHHHHHHHHHHHHHHHHHHhCC-------eEcCCCCcceEEEeCCCcEEEccCCcceeecc
Confidence 9999997542 4888999999999999999999998 99999999999999999999999999987644
Q ss_pred cc-------cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHHHHHHhhcccccc
Q 047954 430 PI-------AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAEI 501 (582)
Q Consensus 430 ~~-------~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (582)
.. ...++..|+|||.+.+..++.++||||||+++|||+| |+.||.... ...+... +........
T Consensus 170 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~----~~~~~~~----~~~~~~~~~ 241 (291)
T 1xbb_A 170 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK----GSEVTAM----LEKGERMGC 241 (291)
T ss_dssp TCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC----HHHHHHH----HHTTCCCCC
T ss_pred CCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCC----HHHHHHH----HHcCCCCCC
Confidence 32 1224577999999988889999999999999999999 999996421 2222222 221111111
Q ss_pred cchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccC
Q 047954 502 FDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVT 550 (582)
Q Consensus 502 ~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 550 (582)
. ......+.+++.+||+.||++|||+.++++.|+.+-..
T Consensus 242 -~---------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 280 (291)
T 1xbb_A 242 -P---------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 280 (291)
T ss_dssp -C---------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred -C---------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 0 01123578899999999999999999999999987543
No 154
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=4.5e-40 Score=330.67 Aligned_cols=249 Identities=18% Similarity=0.321 Sum_probs=196.4
Q ss_pred ccccccCceEEEEEEE-cCCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCChH
Q 047954 274 EGLGKGIFGNSYKALL-EGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLF 352 (582)
Q Consensus 274 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 352 (582)
..||+|+||.||+|.. .++..||||.+........+.+.+|+.++++++||||+++++++...+..++||||+++++|.
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS 107 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHH
Confidence 4799999999999996 457789999997766666788999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecC-CCceEEeeccccccccCc-
Q 047954 353 NRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDD-NEMVLVSDYGFSSLVAQP- 430 (582)
Q Consensus 353 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~-~~~~kl~DfG~a~~~~~~- 430 (582)
+++..... ...+++..+..++.||+.||+|||+.+ |+||||||+||+++. ++.+||+|||+++.....
T Consensus 108 ~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~-------i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~ 177 (295)
T 2clq_A 108 ALLRSKWG---PLKDNEQTIGFYTKQILEGLKYLHDNQ-------IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN 177 (295)
T ss_dssp HHHHHTTC---CCTTCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCSGGGEEEETTTCCEEECCTTTCEESCC--
T ss_pred HHHHhhcc---CCCccHHHHHHHHHHHHHHHHHHHhCC-------EEccCCChhhEEEECCCCCEEEeecccccccCCCC
Confidence 99976432 234678888999999999999999998 999999999999987 899999999999776432
Q ss_pred ---ccccccccccCCCCCCCC--CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccchh
Q 047954 431 ---IAAQRMISYKSPEYQSSK--KISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSE 505 (582)
Q Consensus 431 ---~~~~~~~~y~aPE~~~~~--~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 505 (582)
....++..|+|||++.+. .++.++||||||+++|||++|+.||..... . ...............+ ..
T Consensus 178 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~--~~~~~~~~~~~~~~~~-~~- 249 (295)
T 2clq_A 178 PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGE----P--QAAMFKVGMFKVHPEI-PE- 249 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSS----H--HHHHHHHHHHCCCCCC-CT-
T ss_pred CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCc----h--hHHHHhhccccccccc-cc-
Confidence 234577899999998654 388999999999999999999999953211 1 1111111111111111 00
Q ss_pred hhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 506 ISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 506 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
....++.+++.+||+.||++|||+.|++++.+...
T Consensus 250 --------~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~ 284 (295)
T 2clq_A 250 --------SMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKV 284 (295)
T ss_dssp --------TSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC
T ss_pred --------cCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhh
Confidence 11225778999999999999999999998876543
No 155
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.6e-40 Score=337.29 Aligned_cols=254 Identities=23% Similarity=0.367 Sum_probs=200.3
Q ss_pred cccccccCceEEEEEEE------cCCceEEEEEecCCCc-chHHHHHHHHHHHhcC-CCCCccccceEEEeCC-eeEEEE
Q 047954 273 AEGLGKGIFGNSYKALL------EGRAPVVVKRLRDLKP-LITEEFRKQLLVIADQ-KHPNLLPLLAYYFSND-EKLLVY 343 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~-~~~lv~ 343 (582)
.+.||+|+||.||+|.. .+++.||||+++.... ...+.+.+|+.++.++ +||||+++++++...+ ..++||
T Consensus 32 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~ 111 (316)
T 2xir_A 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 111 (316)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEE
T ss_pred eeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEE
Confidence 56899999999999984 3457899999975432 3446789999999999 7999999999988765 489999
Q ss_pred EeCCCCChHHHHhcCCCCC----------CCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCC
Q 047954 344 KFAGNGNLFNRIHGGKSSK----------NRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDN 413 (582)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~ 413 (582)
||+++|+|.+++....... ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.+
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-------i~H~dikp~Nil~~~~ 184 (316)
T 2xir_A 112 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-------CIHRDLAARNILLSEK 184 (316)
T ss_dssp ECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCSGGGEEECGG
T ss_pred EcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC-------cccccCccceEEECCC
Confidence 9999999999998654210 0123889999999999999999999998 9999999999999999
Q ss_pred CceEEeeccccccccCcc------cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchH
Q 047954 414 EMVLVSDYGFSSLVAQPI------AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLC 486 (582)
Q Consensus 414 ~~~kl~DfG~a~~~~~~~------~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~ 486 (582)
+.+||+|||+++...... ...++..|+|||.+.+..++.++|||||||++|||+| |+.||..... ...+
T Consensus 185 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~---~~~~- 260 (316)
T 2xir_A 185 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI---DEEF- 260 (316)
T ss_dssp GCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCC---SHHH-
T ss_pred CCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccch---hHHH-
Confidence 999999999998764322 2235678999999988899999999999999999998 9999964321 1111
Q ss_pred HHHHHHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccC
Q 047954 487 SWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVT 550 (582)
Q Consensus 487 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 550 (582)
.............+ ....++.+++.+||+.||++|||+.|++++|+.+.+.
T Consensus 261 ---~~~~~~~~~~~~~~----------~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 311 (316)
T 2xir_A 261 ---CRRLKEGTRMRAPD----------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311 (316)
T ss_dssp ---HHHHHHTCCCCCCT----------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---HHHhccCccCCCCC----------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 12222211111110 0112578899999999999999999999999988653
No 156
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=8.6e-41 Score=345.17 Aligned_cols=257 Identities=18% Similarity=0.189 Sum_probs=199.2
Q ss_pred cccccccCceEEEEEEEcC---------CceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccc---------------
Q 047954 273 AEGLGKGIFGNSYKALLEG---------RAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLP--------------- 328 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~--------------- 328 (582)
.+.||+|+||.||+|.... +..||+|.+... +.+.+|+.++++++||||++
T Consensus 47 ~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~ 121 (352)
T 2jii_A 47 KSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPT 121 (352)
T ss_dssp EEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCC
T ss_pred EEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCccCccc
Confidence 4679999999999999764 788999998643 45889999999999999988
Q ss_pred cceEEEe-CCeeEEEEEeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCC
Q 047954 329 LLAYYFS-NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTN 407 (582)
Q Consensus 329 l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~N 407 (582)
+++++.. ....++||||+ +++|.+++.... ...+++..++.++.||+.||+|||+++ |+||||||+|
T Consensus 122 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~~-------ivH~Dikp~N 189 (352)
T 2jii_A 122 CMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP----KHVLSERSVLQVACRLLDALEFLHENE-------YVHGNVTAEN 189 (352)
T ss_dssp CCEEEEETTTEEEEEEECC-CEEHHHHHHHSG----GGCCCHHHHHHHHHHHHHHHHHHHHTT-------CBCSCCCGGG
T ss_pred hhhccccCCcEEEEEecCC-CcCHHHHHHhCC----cCCCCHHHHHHHHHHHHHHHHHHHhCC-------ccCCCCCHHH
Confidence 6777776 67889999999 999999998542 125899999999999999999999998 9999999999
Q ss_pred eeecCCC--ceEEeeccccccccCcc-----------cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 047954 408 ILLDDNE--MVLVSDYGFSSLVAQPI-----------AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTH 474 (582)
Q Consensus 408 ILl~~~~--~~kl~DfG~a~~~~~~~-----------~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~ 474 (582)
||++.++ .+||+|||+++.+.... ...+++.|+|||.+.+..++.++|||||||++|||+||+.||.
T Consensus 190 Il~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 269 (352)
T 2jii_A 190 IFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWT 269 (352)
T ss_dssp EEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTG
T ss_pred EEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 9999998 89999999997764321 2256789999999999899999999999999999999999996
Q ss_pred CCCCCCCccchHHHHHHHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCCCCc
Q 047954 475 SAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTESTE 554 (582)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 554 (582)
.... ....+...... .... .....+..... .....++.+++.+||+.||++|||+++|++.|+.+.......
T Consensus 270 ~~~~--~~~~~~~~~~~-~~~~-~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~ 341 (352)
T 2jii_A 270 NCLP--NTEDIMKQKQK-FVDK-PGPFVGPCGHW----IRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRVS 341 (352)
T ss_dssp GGTT--CHHHHHHHHHH-HHHS-CCCEECTTSCE----ECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred cCCc--CHHHHHHHHHh-ccCC-hhhhhhhcccc----CCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCCC
Confidence 4321 11122222111 1111 11111110000 001136788999999999999999999999999987665543
No 157
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=3.8e-40 Score=328.76 Aligned_cols=244 Identities=24% Similarity=0.403 Sum_probs=195.9
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCC---cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK---PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 348 (582)
.+.||+|+||.||+|... ++..||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||||+++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 93 (279)
T 3fdn_A 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPL 93 (279)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred eeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCC
Confidence 467999999999999865 45689999985421 22356788999999999999999999999999999999999999
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccccc
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~ 428 (582)
|+|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 94 ~~l~~~l~~~~------~~~~~~~~~~~~qi~~~l~~LH~~~-------i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~ 160 (279)
T 3fdn_A 94 GTVYRELQKLS------KFDEQRTATYITELANALSYCHSKR-------VIHRDIKPENLLLGSAGELKIADFGWSVHAP 160 (279)
T ss_dssp EEHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHTTT-------CEECCCCGGGEEECTTSCEEECSCCEESCC-
T ss_pred CcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCC-------EecccCChHhEEEcCCCCEEEEeccccccCC
Confidence 99999987532 4888999999999999999999998 9999999999999999999999999986654
Q ss_pred Cc--ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccchhh
Q 047954 429 QP--IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEI 506 (582)
Q Consensus 429 ~~--~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 506 (582)
.. ....++..|+|||.+.+..++.++||||||+++|||++|+.||.... .......+ ..... .. ..
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~~~~~~---~~~~~--~~-~~-- 228 (279)
T 3fdn_A 161 SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT----YQETYKRI---SRVEF--TF-PD-- 228 (279)
T ss_dssp -------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS----HHHHHHHH---HHTCC--CC-CT--
T ss_pred cccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCc----HHHHHHHH---HhCCC--CC-CC--
Confidence 33 23457789999999999999999999999999999999999996421 11111111 11110 00 00
Q ss_pred hhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 507 SVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 507 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
.....+.+++.+||+.||++|||+.|+++|.+...
T Consensus 229 -------~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~ 263 (279)
T 3fdn_A 229 -------FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 263 (279)
T ss_dssp -------TSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHH
T ss_pred -------cCCHHHHHHHHHHhccChhhCCCHHHHhhCccccC
Confidence 01125778999999999999999999999988654
No 158
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=7.8e-40 Score=329.11 Aligned_cols=245 Identities=22% Similarity=0.330 Sum_probs=199.2
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCC---CcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDL---KPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 348 (582)
.+.||+|+||.||+|... +++.||+|.+... .....+.+.+|+.++++++||||+++++++.+.+..++||||+++
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 99 (294)
T 2rku_A 20 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRR 99 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCC
Confidence 467999999999999976 4678999988543 233456789999999999999999999999999999999999999
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccccc
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~ 428 (582)
++|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 100 ~~L~~~~~~~~------~~~~~~~~~i~~qi~~~l~~lH~~~-------i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 166 (294)
T 2rku_A 100 RSLLELHKRRK------ALTEPEARYYLRQIVLGCQYLHRNR-------VIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 166 (294)
T ss_dssp CBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred CCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------ccccCCChHhEEEcCCCCEEEEeccCceecc
Confidence 99999886432 4889999999999999999999998 9999999999999999999999999997764
Q ss_pred Cc----ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccch
Q 047954 429 QP----IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDS 504 (582)
Q Consensus 429 ~~----~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 504 (582)
.. ....++..|+|||.+.+..++.++||||||+++|||+||+.||.... ............. .. ..
T Consensus 167 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-------~~~~~~~~~~~~~--~~-~~ 236 (294)
T 2rku_A 167 YDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC-------LKETYLRIKKNEY--SI-PK 236 (294)
T ss_dssp STTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS-------HHHHHHHHHTTCC--CC-CT
T ss_pred cCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHHhhccC--CC-cc
Confidence 32 22346788999999998889999999999999999999999996422 1111111111111 00 00
Q ss_pred hhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhccc
Q 047954 505 EISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKV 549 (582)
Q Consensus 505 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 549 (582)
.....+.+++.+||+.||++|||++|++++.+....
T Consensus 237 ---------~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~ 272 (294)
T 2rku_A 237 ---------HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG 272 (294)
T ss_dssp ---------TSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTS
T ss_pred ---------ccCHHHHHHHHHHcccChhhCcCHHHHhhChheecC
Confidence 011257789999999999999999999999876543
No 159
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.4e-40 Score=344.42 Aligned_cols=256 Identities=20% Similarity=0.338 Sum_probs=186.5
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCC--CcchHHHHHHHHHHHhcCC-CCCccccceEEEeCC--eeEEEEEeC
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDL--KPLITEEFRKQLLVIADQK-HPNLLPLLAYYFSND--EKLLVYKFA 346 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~--~~~lv~e~~ 346 (582)
.+.||+|+||.||+|.. .+++.||||++... .....+.+.+|+.++.++. ||||+++++++...+ ..++|||||
T Consensus 14 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~ 93 (388)
T 3oz6_A 14 VKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM 93 (388)
T ss_dssp EEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECC
T ss_pred EEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEeccc
Confidence 46799999999999986 46788999998643 2334567889999999997 999999999998654 689999999
Q ss_pred CCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccc
Q 047954 347 GNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSL 426 (582)
Q Consensus 347 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~ 426 (582)
. |+|.+++... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+|+.
T Consensus 94 ~-~~L~~~~~~~-------~~~~~~~~~i~~qi~~~L~~LH~~~-------ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 158 (388)
T 3oz6_A 94 E-TDLHAVIRAN-------ILEPVHKQYVVYQLIKVIKYLHSGG-------LLHRDMKPSNILLNAECHVKVADFGLSRS 158 (388)
T ss_dssp S-EEHHHHHHHT-------CCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred C-cCHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHhCC-------EEeCCCCHHHeEEcCCCCEEecCCccccc
Confidence 7 6999998753 4788899999999999999999998 99999999999999999999999999976
Q ss_pred ccCc-------------------------ccccccccccCCCCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCC
Q 047954 427 VAQP-------------------------IAAQRMISYKSPEYQSS-KKISRKSDVWSFGCLLLELLTGRISTHSAPQGI 480 (582)
Q Consensus 427 ~~~~-------------------------~~~~~~~~y~aPE~~~~-~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~ 480 (582)
+... ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~--- 235 (388)
T 3oz6_A 159 FVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS--- 235 (388)
T ss_dssp SSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS---
T ss_pred ccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC---
Confidence 5321 12347788999999876 678999999999999999999999996432
Q ss_pred CccchHHHHHHHHhhccccc---ccch----------------------hhhh-------hhchHHHHHHHHHHHHHccc
Q 047954 481 NGADLCSWVLRAVREEWTAE---IFDS----------------------EISV-------QRSAAHGMLKLLQVAIQCCN 528 (582)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~---~~d~----------------------~~~~-------~~~~~~~~~~l~~l~~~Cl~ 528 (582)
..+....+........... +..+ .+.. .........++.+|+.+||.
T Consensus 236 -~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~ 314 (388)
T 3oz6_A 236 -TMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQ 314 (388)
T ss_dssp -HHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCC
T ss_pred -HHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhc
Confidence 2222222221111000000 0000 0000 00000112367899999999
Q ss_pred CCCCCCCChHHHHHHHhhc
Q 047954 529 KSPEKRPEMAEVVSELEII 547 (582)
Q Consensus 529 ~dP~~RPs~~evl~~L~~i 547 (582)
.||++|||++|+++|.+.-
T Consensus 315 ~dP~~R~t~~e~l~Hp~~~ 333 (388)
T 3oz6_A 315 FNPNKRISANDALKHPFVS 333 (388)
T ss_dssp SSGGGSCCHHHHTTSTTTT
T ss_pred cCcccCCCHHHHhCCHHHH
Confidence 9999999999999997754
No 160
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.4e-41 Score=354.13 Aligned_cols=247 Identities=15% Similarity=0.176 Sum_probs=195.5
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCC---cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK---PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 348 (582)
.+.||+|+||+||+|+.. +++.||+|+++... ....+.+.+|..++.+++||||+++++++.+.+..++||||+++
T Consensus 66 ~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~g 145 (412)
T 2vd5_A 66 LKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVG 145 (412)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCC
Confidence 467999999999999975 68899999986421 12234578899999999999999999999999999999999999
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccccc
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~ 428 (582)
|+|.+++.... ..+++..++.++.||+.||+|||+.+ ||||||||+|||++.++.+||+|||+++...
T Consensus 146 g~L~~~l~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~g-------iiHrDLKp~NILld~~g~vkL~DFGla~~~~ 213 (412)
T 2vd5_A 146 GDLLTLLSKFG-----ERIPAEMARFYLAEIVMAIDSVHRLG-------YVHRDIKPDNILLDRCGHIRLADFGSCLKLR 213 (412)
T ss_dssp CBHHHHHHHHS-----SCCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred CcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCC-------eeecccCHHHeeecCCCCEEEeechhheecc
Confidence 99999997532 14888999999999999999999998 9999999999999999999999999998765
Q ss_pred Ccc-----cccccccccCCCCCC-------CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhc
Q 047954 429 QPI-----AAQRMISYKSPEYQS-------SKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREE 496 (582)
Q Consensus 429 ~~~-----~~~~~~~y~aPE~~~-------~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 496 (582)
... ...+|+.|+|||++. ...++.++|||||||++|||++|+.||.... ..+....+.......
T Consensus 214 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~----~~~~~~~i~~~~~~~ 289 (412)
T 2vd5_A 214 ADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADS----TAETYGKIVHYKEHL 289 (412)
T ss_dssp TTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSS----HHHHHHHHHTHHHHC
T ss_pred CCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCC----HHHHHHHHHhcccCc
Confidence 432 235789999999886 3568999999999999999999999996432 222222221111100
Q ss_pred ccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCC---CChHHHHHHHhh
Q 047954 497 WTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKR---PEMAEVVSELEI 546 (582)
Q Consensus 497 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~R---Ps~~evl~~L~~ 546 (582)
..+. .+ .....++.+++.+||. +|++| |+++|+++|.+.
T Consensus 290 ~~p~-~~---------~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff 331 (412)
T 2vd5_A 290 SLPL-VD---------EGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFF 331 (412)
T ss_dssp CCC--------------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGG
T ss_pred CCCc-cc---------cCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCc
Confidence 0000 00 0112257789999998 99998 699999999875
No 161
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1e-39 Score=330.88 Aligned_cols=250 Identities=17% Similarity=0.287 Sum_probs=192.3
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCC---cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK---PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 348 (582)
.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++.+++||||+++++++...+..++||||+++
T Consensus 39 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 118 (309)
T 2h34_A 39 RRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLING 118 (309)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCC
T ss_pred EEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCC
Confidence 467999999999999975 67889999986532 22346789999999999999999999999999999999999999
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccccc
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~ 428 (582)
++|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 119 ~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~lH~~~-------i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 185 (309)
T 2h34_A 119 VDLAAMLRRQG------PLAPPRAVAIVRQIGSALDAAHAAG-------ATHRDVKPENILVSADDFAYLVDFGIASATT 185 (309)
T ss_dssp EEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred CCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCc-------CCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence 99999997532 4889999999999999999999998 9999999999999999999999999987764
Q ss_pred Ccc-----cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhccc-cccc
Q 047954 429 QPI-----AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWT-AEIF 502 (582)
Q Consensus 429 ~~~-----~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 502 (582)
... ...++..|+|||.+.+..++.++||||||+++|||+||+.||.... . ..+......... ....
T Consensus 186 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~-~~~~~~~~~~~~~~~~~ 257 (309)
T 2h34_A 186 DEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ-------L-SVMGAHINQAIPRPSTV 257 (309)
T ss_dssp -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCH-------H-HHHHHHHHSCCCCGGGT
T ss_pred ccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCch-------H-HHHHHHhccCCCCcccc
Confidence 432 2346788999999999999999999999999999999999996421 1 111122111111 0001
Q ss_pred chhhhhhhchHHHHHHHHHHHHHcccCCCCCCC-ChHHHHHHHhhcccCCC
Q 047954 503 DSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRP-EMAEVVSELEIIKVTES 552 (582)
Q Consensus 503 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-s~~evl~~L~~i~~~~~ 552 (582)
.+ ....++.+++.+||+.||++|| +++++++.|+.+.....
T Consensus 258 ~~---------~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~ 299 (309)
T 2h34_A 258 RP---------GIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD 299 (309)
T ss_dssp ST---------TCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred CC---------CCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence 11 1112577899999999999999 99999999998765543
No 162
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.3e-41 Score=344.21 Aligned_cols=263 Identities=18% Similarity=0.299 Sum_probs=196.0
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCCcc-hHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKPL-ITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGN 350 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 350 (582)
.+.||+|+||.||+|... ++..||+|++...... ....+.+|+.++++++||||+++++++...+..++||||+. |+
T Consensus 7 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~ 85 (324)
T 3mtl_A 7 LDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KD 85 (324)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-EE
T ss_pred EEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-cC
Confidence 367999999999999976 6788999998643321 11245579999999999999999999999999999999997 59
Q ss_pred hHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccCc
Q 047954 351 LFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP 430 (582)
Q Consensus 351 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~~ 430 (582)
|.+++..... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 86 l~~~~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~-------ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 153 (324)
T 3mtl_A 86 LKQYLDDCGN-----IINMHNVKLFLFQLLRGLAYCHRQK-------VLHRDLKPQNLLINERGELKLADFGLARAKSIP 153 (324)
T ss_dssp HHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHTT-------EEESSCCGGGEEECTTCCEEECSSSEEECC---
T ss_pred HHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCC-------ccCCCcCHHHEEECCCCCEEEccCcccccccCC
Confidence 9998875432 4888999999999999999999998 999999999999999999999999999766433
Q ss_pred c----cccccccccCCCCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhccc---cccc
Q 047954 431 I----AAQRMISYKSPEYQSS-KKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWT---AEIF 502 (582)
Q Consensus 431 ~----~~~~~~~y~aPE~~~~-~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 502 (582)
. ...++..|+|||++.+ ..++.++|||||||++|||++|+.||... ...+....+.+....... ....
T Consensus 154 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~----~~~~~~~~i~~~~~~~~~~~~~~~~ 229 (324)
T 3mtl_A 154 TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGS----TVEEQLHFIFRILGTPTEETWPGIL 229 (324)
T ss_dssp ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS----SHHHHHHHHHHHHCCCCTTTSTTGG
T ss_pred ccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC----CHHHHHHHHHHHhCCCChHhchhhh
Confidence 2 2346788999998876 56899999999999999999999999643 222333333332221100 0000
Q ss_pred ch-hhhh-----------hhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCCC
Q 047954 503 DS-EISV-----------QRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTES 552 (582)
Q Consensus 503 d~-~~~~-----------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 552 (582)
.. .... .........++.+++.+||+.||++|||++|+++|.|.....+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~ 291 (324)
T 3mtl_A 230 SNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGER 291 (324)
T ss_dssp GCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCST
T ss_pred cchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcccc
Confidence 00 0000 00000112357789999999999999999999999887655443
No 163
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=5.5e-40 Score=326.75 Aligned_cols=246 Identities=19% Similarity=0.326 Sum_probs=196.6
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCC-CcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDL-KPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGN 350 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 350 (582)
.+.||+|+||.||+|... +++.||||++... .....+.+.+|+.++++++||||+++++++.+.+..++||||+++++
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 91 (276)
T 2yex_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91 (276)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred EEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCCc
Confidence 467999999999999975 6788999998643 23445788999999999999999999999999999999999999999
Q ss_pred hHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccCc
Q 047954 351 LFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP 430 (582)
Q Consensus 351 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~~ 430 (582)
|.+++... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 92 L~~~l~~~------~~~~~~~~~~~~~~i~~~l~~lH~~~-------i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 158 (276)
T 2yex_A 92 LFDRIEPD------IGMPEPDAQRFFHQLMAGVVYLHGIG-------ITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (276)
T ss_dssp GGGGSBTT------TBCCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred HHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHHhCC-------eeccCCChHHEEEccCCCEEEeeCCCccccCCC
Confidence 99988642 25888999999999999999999998 999999999999999999999999999765322
Q ss_pred ------ccccccccccCCCCCCCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccc
Q 047954 431 ------IAAQRMISYKSPEYQSSKKI-SRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFD 503 (582)
Q Consensus 431 ------~~~~~~~~y~aPE~~~~~~~-~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 503 (582)
....++..|+|||.+.+..+ +.++||||||+++|||++|+.||...... ......+. ... . ...
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~----~~~-~--~~~ 229 (276)
T 2yex_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS--CQEYSDWK----EKK-T--YLN 229 (276)
T ss_dssp TEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTT--SHHHHHHH----TTC-T--TST
T ss_pred cchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchH--HHHHHHhh----hcc-c--ccC
Confidence 23346788999999987665 78999999999999999999999753221 11111111 110 0 000
Q ss_pred hhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhc
Q 047954 504 SEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547 (582)
Q Consensus 504 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 547 (582)
. .......+.+++.+||+.||++|||+.|++++.+.-
T Consensus 230 ~-------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~ 266 (276)
T 2yex_A 230 P-------WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN 266 (276)
T ss_dssp T-------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTT
T ss_pred c-------hhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCcccc
Confidence 0 001112577899999999999999999999876643
No 164
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1e-39 Score=327.59 Aligned_cols=246 Identities=20% Similarity=0.345 Sum_probs=194.1
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCC--CcchHHHHHHHHHHHhcCCCCCccccceEEEe----CCeeEEEEEe
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDL--KPLITEEFRKQLLVIADQKHPNLLPLLAYYFS----NDEKLLVYKF 345 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~----~~~~~lv~e~ 345 (582)
.+.||+|+||.||+|... ++..||+|.+... .....+.+.+|+.++++++||||+++++++.. ....++||||
T Consensus 31 ~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~ 110 (290)
T 1t4h_A 31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTEL 110 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEEC
T ss_pred eeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEe
Confidence 457999999999999865 5678999998643 33455778999999999999999999999876 3457999999
Q ss_pred CCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeec-CCCceEEeecccc
Q 047954 346 AGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLD-DNEMVLVSDYGFS 424 (582)
Q Consensus 346 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~-~~~~~kl~DfG~a 424 (582)
+++|+|.+++.... .+++..++.++.||+.||.|||+.++ +|+||||||+|||++ .++.+||+|||++
T Consensus 111 ~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~~-----~i~H~dikp~Nil~~~~~~~~kl~Dfg~~ 179 (290)
T 1t4h_A 111 MTSGTLKTYLKRFK------VMKIKVLRSWCRQILKGLQFLHTRTP-----PIIHRDLKCDNIFITGPTGSVKIGDLGLA 179 (290)
T ss_dssp CCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHTSSS-----CCCCSCCCGGGEEESSTTSCEEECCTTGG
T ss_pred cCCCCHHHHHHHcc------CCCHHHHHHHHHHHHHHHHHHHcCCC-----CEEECCCCHHHEEEECCCCCEEEeeCCCc
Confidence 99999999997532 47889999999999999999999862 499999999999998 7899999999999
Q ss_pred ccccCc--ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhccccccc
Q 047954 425 SLVAQP--IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIF 502 (582)
Q Consensus 425 ~~~~~~--~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (582)
...... ....++..|+|||.+. ..++.++|||||||++|||++|+.||.... .... ..............
T Consensus 180 ~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~------~~~~-~~~~~~~~~~~~~~ 251 (290)
T 1t4h_A 180 TLKRASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQ------NAAQ-IYRRVTSGVKPASF 251 (290)
T ss_dssp GGCCTTSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCS------SHHH-HHHHHTTTCCCGGG
T ss_pred ccccccccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcC------cHHH-HHHHHhccCCcccc
Confidence 765443 2344788999999876 458999999999999999999999996422 1111 11222221111111
Q ss_pred chhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhh
Q 047954 503 DSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEI 546 (582)
Q Consensus 503 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 546 (582)
+. ....++.+++.+||+.||++|||+.|+++|.+.
T Consensus 252 ~~---------~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f 286 (290)
T 1t4h_A 252 DK---------VAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFF 286 (290)
T ss_dssp GG---------CCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred CC---------CCCHHHHHHHHHHccCChhhCCCHHHHhhCccc
Confidence 11 011257889999999999999999999998764
No 165
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=9.5e-41 Score=345.86 Aligned_cols=260 Identities=21% Similarity=0.311 Sum_probs=198.9
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCC-CcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDL-KPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGN 350 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 350 (582)
.+.||+|+||.||+|... ++..||+|++... .....+.+.+|+.++++++||||+++++++...+..++||||+++|+
T Consensus 38 ~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 117 (360)
T 3eqc_A 38 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS 117 (360)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCB
T ss_pred eeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCC
Confidence 467999999999999976 6788999998754 33445778999999999999999999999999999999999999999
Q ss_pred hHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhcc-CCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccC
Q 047954 351 LFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK-DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ 429 (582)
Q Consensus 351 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~ 429 (582)
|.+++.... .+++..+..++.|++.||+|||+. + |+||||||+|||++.++.+||+|||+++....
T Consensus 118 L~~~l~~~~------~~~~~~~~~i~~~i~~~l~~lh~~~~-------i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 184 (360)
T 3eqc_A 118 LDQVLKKAG------RIPEQILGKVSIAVIKGLTYLREKHK-------IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 184 (360)
T ss_dssp HHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHHHC-------CCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred HHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHhCC-------EEcCCccHHHEEECCCCCEEEEECCCCccccc
Confidence 999997532 478899999999999999999986 6 99999999999999999999999999875532
Q ss_pred c--ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcc----------
Q 047954 430 P--IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEW---------- 497 (582)
Q Consensus 430 ~--~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~---------- 497 (582)
. ....++..|+|||++.+..++.++|||||||++|||+||+.||..... .++............
T Consensus 185 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (360)
T 3eqc_A 185 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDA----KELELMFGCQVEGDAAETPPRPRTP 260 (360)
T ss_dssp HC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCH----HHHHHHHC-----------------
T ss_pred ccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHhcccccccCCCCCCCcccC
Confidence 2 234578899999999999999999999999999999999999964321 111000000000000
Q ss_pred ----------------cccccchhhhh---hhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhccc
Q 047954 498 ----------------TAEIFDSEISV---QRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKV 549 (582)
Q Consensus 498 ----------------~~~~~d~~~~~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 549 (582)
..+..+..... .........++.+++.+||+.||++|||++|+++|.+.-..
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 331 (360)
T 3eqc_A 261 GRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 331 (360)
T ss_dssp -------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHH
T ss_pred CCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcc
Confidence 00000000000 00000112357889999999999999999999999886543
No 166
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=7.1e-41 Score=333.89 Aligned_cols=246 Identities=25% Similarity=0.418 Sum_probs=192.1
Q ss_pred cccccccCceEEEEEEEcCCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeC-CeeEEEEEeCCCCCh
Q 047954 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSN-DEKLLVYKFAGNGNL 351 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-~~~~lv~e~~~~gsL 351 (582)
.+.||+|+||.||+|... +..||||.++... ..+.+.+|+.++++++||||+++++++... +..++||||+++|+|
T Consensus 26 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L 102 (278)
T 1byg_A 26 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 102 (278)
T ss_dssp EEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEH
T ss_pred EeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCH
Confidence 467999999999999875 6789999986533 467799999999999999999999997655 468999999999999
Q ss_pred HHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccCc-
Q 047954 352 FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP- 430 (582)
Q Consensus 352 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~~- 430 (582)
.+++..... ..+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 103 ~~~l~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~-------i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 171 (278)
T 1byg_A 103 VDYLRSRGR----SVLGGDCLLKFSLDVCEAMEYLEGNN-------FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 171 (278)
T ss_dssp HHHHHHHHH----HHCCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred HHHHHhccc----ccCCHHHHHHHHHHHHHHHHHHHhCC-------ccccCCCcceEEEeCCCcEEEeeccccccccccc
Confidence 999974321 13788889999999999999999998 999999999999999999999999999766443
Q ss_pred ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHHHHHHhhcccccccchhhhhh
Q 047954 431 IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQ 509 (582)
Q Consensus 431 ~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 509 (582)
....++..|+|||.+.+..++.++||||||+++|||+| |+.||.... ..++...+ .........
T Consensus 172 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~----~~~~~~~~----~~~~~~~~~------- 236 (278)
T 1byg_A 172 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP----LKDVVPRV----EKGYKMDAP------- 236 (278)
T ss_dssp ----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC----GGGHHHHH----TTTCCCCCC-------
T ss_pred cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCC----HHHHHHHH----hcCCCCCCc-------
Confidence 23345678999999988899999999999999999998 999996432 22222221 111111111
Q ss_pred hchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccC
Q 047954 510 RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVT 550 (582)
Q Consensus 510 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 550 (582)
......+.+++.+||+.||++|||+.|+++.|+.++..
T Consensus 237 ---~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 237 ---DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp ---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---ccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 01123578899999999999999999999999988754
No 167
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.8e-41 Score=353.66 Aligned_cols=242 Identities=14% Similarity=0.134 Sum_probs=186.9
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecC---CCcchHHHHHHHH---HHHhcCCCCCccccc-------eEEEeCC-
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRD---LKPLITEEFRKQL---LVIADQKHPNLLPLL-------AYYFSND- 337 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~---~~~~~~~~~~~e~---~~l~~l~H~niv~l~-------~~~~~~~- 337 (582)
.+.||+|+||.||+|.. .+++.||||++.. ......+.+.+|+ .++++++|||||+++ +++...+
T Consensus 78 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 157 (377)
T 3byv_A 78 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 157 (377)
T ss_dssp EEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTS
T ss_pred cceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCC
Confidence 46799999999999995 5688999999963 2334567889999 556666899999998 6666553
Q ss_pred ----------------eeEEEEEeCCCCChHHHHhcCCCC-CCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCccee
Q 047954 338 ----------------EKLLVYKFAGNGNLFNRIHGGKSS-KNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400 (582)
Q Consensus 338 ----------------~~~lv~e~~~~gsL~~~l~~~~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH 400 (582)
..++||||+ +|+|.+++...... .....+++..++.|+.||+.||+|||+++ |+|
T Consensus 158 ~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-------ivH 229 (377)
T 3byv_A 158 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG-------LVH 229 (377)
T ss_dssp CSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT-------EEC
T ss_pred ccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC-------eec
Confidence 278999999 68999999753211 11234566888999999999999999998 999
Q ss_pred cCCCCCCeeecCCCceEEeeccccccccCcc-cccccccccCCCCCCCC-----------CCCcchhHHHHHHHHHHHHh
Q 047954 401 GNLKSTNILLDDNEMVLVSDYGFSSLVAQPI-AAQRMISYKSPEYQSSK-----------KISRKSDVWSFGCLLLELLT 468 (582)
Q Consensus 401 ~Dlkp~NILl~~~~~~kl~DfG~a~~~~~~~-~~~~~~~y~aPE~~~~~-----------~~~~k~DVwS~Gvvl~ellt 468 (582)
|||||+|||++.++.+||+|||+++...... ...+ ..|+|||++.+. .++.++|||||||++|||+|
T Consensus 230 rDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ellt 308 (377)
T 3byv_A 230 TYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWC 308 (377)
T ss_dssp SCCCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHH
Confidence 9999999999999999999999998755432 2335 889999999877 89999999999999999999
Q ss_pred CCCCCCCCCCCCCccchHHHHHHHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhh
Q 047954 469 GRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEI 546 (582)
Q Consensus 469 G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 546 (582)
|+.||.......... .+... .. ....++.+++.+||+.||++|||+.|++++.+.
T Consensus 309 g~~Pf~~~~~~~~~~----------------~~~~~----~~---~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f 363 (377)
T 3byv_A 309 ADLPITKDAALGGSE----------------WIFRS----CK---NIPQPVRALLEGFLRYPKEDRLLPLQAMETPEY 363 (377)
T ss_dssp SSCCC------CCSG----------------GGGSS----CC---CCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHH
T ss_pred CCCCCcccccccchh----------------hhhhh----cc---CCCHHHHHHHHHHcCCCchhCCCHHHHhhChHH
Confidence 999996432211100 00000 00 011257789999999999999999999988664
No 168
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=2.1e-40 Score=354.20 Aligned_cols=255 Identities=18% Similarity=0.264 Sum_probs=190.9
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCC--CcchHHHHHHHHHHHhcCCCCCccccceEEEeCC------eeEEEE
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDL--KPLITEEFRKQLLVIADQKHPNLLPLLAYYFSND------EKLLVY 343 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------~~~lv~ 343 (582)
.+.||+|+||+||+|... +++.||||++... .....+.+.+|+.++++++|||||++++++.... ..++||
T Consensus 67 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~ 146 (464)
T 3ttj_A 67 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 146 (464)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEE
T ss_pred EEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEE
Confidence 467999999999999864 5788999999653 3344567889999999999999999999997653 569999
Q ss_pred EeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccc
Q 047954 344 KFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGF 423 (582)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~ 423 (582)
||+.+ +|.+.+.. .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 147 E~~~~-~l~~~~~~--------~l~~~~~~~~~~qil~aL~~lH~~~-------iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 147 ELMDA-NLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSAG-------IIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp ECCSE-EHHHHHTS--------CCCHHHHHHHHHHHHHHHHHHHHTT-------CCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred eCCCC-CHHHHHhh--------cCCHHHHHHHHHHHHHHHHHHHHCC-------cccCCCChHhEEEeCCCCEEEEEEEe
Confidence 99975 57777642 3788899999999999999999998 99999999999999999999999999
Q ss_pred cccccCc---ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcc---
Q 047954 424 SSLVAQP---IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEW--- 497 (582)
Q Consensus 424 a~~~~~~---~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~--- 497 (582)
|+..... ....+|+.|+|||++.+..|+.++||||+||++|||++|+.||.... ..+....+........
T Consensus 211 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~----~~~~~~~i~~~lg~p~~~~ 286 (464)
T 3ttj_A 211 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD----YIDQWNKVIEQLGTPCPEF 286 (464)
T ss_dssp C-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHHHHHHCSCCHHH
T ss_pred eeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHHhcCCCCHHH
Confidence 9877543 23457889999999999999999999999999999999999996432 1222222211111000
Q ss_pred c-----------------c-----cccchhh-hh-hhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhc
Q 047954 498 T-----------------A-----EIFDSEI-SV-QRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547 (582)
Q Consensus 498 ~-----------------~-----~~~d~~~-~~-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 547 (582)
. . ..+.... .. .........++.+|+.+||..||++|||++|+++|.+.-
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~ 360 (464)
T 3ttj_A 287 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360 (464)
T ss_dssp HTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTG
T ss_pred HHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhh
Confidence 0 0 0000000 00 000111245688999999999999999999999998754
No 169
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=6.6e-40 Score=336.14 Aligned_cols=245 Identities=22% Similarity=0.332 Sum_probs=199.2
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCC---CcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDL---KPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 348 (582)
.+.||+|+||.||++... +++.||+|.+... .....+.+.+|+.++++++||||+++++++.+.+..++||||+.+
T Consensus 46 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 125 (335)
T 2owb_A 46 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRR 125 (335)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCC
Confidence 467999999999999976 4678999998643 234557789999999999999999999999999999999999999
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccccc
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~ 428 (582)
++|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 126 ~~L~~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH~~~-------ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 192 (335)
T 2owb_A 126 RSLLELHKRRK------ALTEPEARYYLRQIVLGCQYLHRNR-------VIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 192 (335)
T ss_dssp CBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred CCHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHCC-------CEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence 99999886432 4889999999999999999999998 9999999999999999999999999998764
Q ss_pred Cc----ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccch
Q 047954 429 QP----IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDS 504 (582)
Q Consensus 429 ~~----~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 504 (582)
.. ....++..|+|||++.+..++.++||||||+++|||++|+.||.... .............. + ..
T Consensus 193 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~~~~~~~~~~~~~~--~-~~ 262 (335)
T 2owb_A 193 YDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC-------LKETYLRIKKNEYS--I-PK 262 (335)
T ss_dssp STTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS-------HHHHHHHHHHTCCC--C-CT
T ss_pred cCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCC-------HHHHHHHHhcCCCC--C-Cc
Confidence 32 22346788999999988889999999999999999999999996421 11111111111110 0 00
Q ss_pred hhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhccc
Q 047954 505 EISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKV 549 (582)
Q Consensus 505 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 549 (582)
.....+.+++.+||+.||++|||+.|++++.+....
T Consensus 263 ---------~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~ 298 (335)
T 2owb_A 263 ---------HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG 298 (335)
T ss_dssp ---------TSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTS
T ss_pred ---------cCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCC
Confidence 011257789999999999999999999998776543
No 170
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=4.9e-40 Score=332.07 Aligned_cols=248 Identities=20% Similarity=0.382 Sum_probs=202.7
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCC-cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK-PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGN 350 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 350 (582)
.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++......++||||+++++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 106 (303)
T 3a7i_A 27 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS 106 (303)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred hhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCc
Confidence 467999999999999864 67889999986443 3456789999999999999999999999999999999999999999
Q ss_pred hHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccCc
Q 047954 351 LFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP 430 (582)
Q Consensus 351 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~~ 430 (582)
|.+++... .+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 107 L~~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~~-------i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 172 (303)
T 3a7i_A 107 ALDLLEPG-------PLDETQIATILREILKGLDYLHSEK-------KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 172 (303)
T ss_dssp HHHHHTTS-------CCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCSGGGEEECTTSCEEECCCTTCEECBTT
T ss_pred HHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCC-------CccCCCChheEEECCCCCEEEeecccceecCcc
Confidence 99998632 4889999999999999999999998 999999999999999999999999999776543
Q ss_pred ----ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccchhh
Q 047954 431 ----IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEI 506 (582)
Q Consensus 431 ----~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 506 (582)
....++..|+|||.+.+..++.++||||||+++|||++|+.||.... ....... ......... ...
T Consensus 173 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~~~~~----~~~~~~~~~-~~~- 242 (303)
T 3a7i_A 173 QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH----PMKVLFL----IPKNNPPTL-EGN- 242 (303)
T ss_dssp BCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC----HHHHHHH----HHHSCCCCC-CSS-
T ss_pred ccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcC----HHHHHHH----hhcCCCCCC-ccc-
Confidence 23346788999999999999999999999999999999999996421 1111111 111111111 111
Q ss_pred hhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCCC
Q 047954 507 SVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTES 552 (582)
Q Consensus 507 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 552 (582)
....+.+++.+||+.||++|||+.|++++.+.......
T Consensus 243 --------~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~~ 280 (303)
T 3a7i_A 243 --------YSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKK 280 (303)
T ss_dssp --------CCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHHCCC
T ss_pred --------cCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhcCCCc
Confidence 11257889999999999999999999999887665443
No 171
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=5.4e-40 Score=336.69 Aligned_cols=268 Identities=20% Similarity=0.263 Sum_probs=191.6
Q ss_pred cccccccCceEEEEEEEcCCceEEEEEecCCCcchHHHHHHHHHH--HhcCCCCCccccceEEEe-----CCeeEEEEEe
Q 047954 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLV--IADQKHPNLLPLLAYYFS-----NDEKLLVYKF 345 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~--l~~l~H~niv~l~~~~~~-----~~~~~lv~e~ 345 (582)
.+.||+|+||.||+|+. +++.||||++... ....+..|.++ +..++||||+++++++.. ....++||||
T Consensus 18 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~ 93 (336)
T 3g2f_A 18 LELIGRGRYGAVYKGSL-DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEY 93 (336)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECC
T ss_pred eeecccCCCeEEEEEEE-CCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEec
Confidence 46799999999999976 5688999998643 23444445444 456899999999986653 2256899999
Q ss_pred CCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCC--CCCCcceecCCCCCCeeecCCCceEEeeccc
Q 047954 346 AGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKS--RTQSAVIHGNLKSTNILLDDNEMVLVSDYGF 423 (582)
Q Consensus 346 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~--~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~ 423 (582)
+++|+|.+++... ..++..++.++.||+.||+|||+..+. ...++|+||||||+|||++.++.+||+|||+
T Consensus 94 ~~~g~L~~~l~~~-------~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~ 166 (336)
T 3g2f_A 94 YPNGSLXKYLSLH-------TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGL 166 (336)
T ss_dssp CTTCBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTT
T ss_pred CCCCcHHHHHhhc-------ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccc
Confidence 9999999999754 257888999999999999999998100 0001299999999999999999999999999
Q ss_pred cccccCcc------------cccccccccCCCCCCC-------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccc
Q 047954 424 SSLVAQPI------------AAQRMISYKSPEYQSS-------KKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGAD 484 (582)
Q Consensus 424 a~~~~~~~------------~~~~~~~y~aPE~~~~-------~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~ 484 (582)
++.+.... ...+|..|+|||++.+ ..++.++|||||||++|||+||..||...........
T Consensus 167 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~ 246 (336)
T 3g2f_A 167 SMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQM 246 (336)
T ss_dssp CEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCC
T ss_pred eeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHH
Confidence 97664321 2347889999999876 3567799999999999999999877754322111111
Q ss_pred hH----------HHHHHHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCCCCc
Q 047954 485 LC----------SWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTESTE 554 (582)
Q Consensus 485 ~~----------~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 554 (582)
.. ...............+... .........++.+++.+||+.||++|||+.|+++.|+.+.......
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~ 323 (336)
T 3g2f_A 247 AFQTEVGNHPTFEDMQVLVSREKQRPKFPEA---WKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERN 323 (336)
T ss_dssp TTHHHHCSSCCHHHHHHHHTTSCCCCCCCTT---CCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC-
T ss_pred hhhcccCCCchHHHHHhhhcccccCCCCCcc---cccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhc
Confidence 10 1111111111111111100 0111234456889999999999999999999999999998655443
No 172
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=2e-40 Score=338.77 Aligned_cols=254 Identities=22% Similarity=0.383 Sum_probs=198.1
Q ss_pred cccccccCceEEEEEEE------cCCceEEEEEecCC-CcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEe
Q 047954 273 AEGLGKGIFGNSYKALL------EGRAPVVVKRLRDL-KPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKF 345 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 345 (582)
.+.||+|+||.||+|.. .++..||||.+... .......+.+|+.++++++||||+++++++......++||||
T Consensus 35 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 114 (327)
T 2yfx_A 35 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMEL 114 (327)
T ss_dssp EEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred EEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEec
Confidence 46799999999999984 34668999999643 334456789999999999999999999999999999999999
Q ss_pred CCCCChHHHHhcCCCCC-CCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecC---CCceEEeec
Q 047954 346 AGNGNLFNRIHGGKSSK-NRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDD---NEMVLVSDY 421 (582)
Q Consensus 346 ~~~gsL~~~l~~~~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~---~~~~kl~Df 421 (582)
+++|+|.+++....... ....+++..++.++.||+.||.|||+.+ |+||||||+|||++. +..+||+||
T Consensus 115 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-------i~H~dlkp~NIli~~~~~~~~~kl~Df 187 (327)
T 2yfx_A 115 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH-------FIHRDIAARNCLLTCPGPGRVAKIGDF 187 (327)
T ss_dssp CTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCCGGGEEESCSSTTCCEEECCC
T ss_pred CCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC-------eecCcCCHhHEEEecCCCcceEEECcc
Confidence 99999999998654321 1135888999999999999999999998 999999999999984 456999999
Q ss_pred cccccccCc------ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHHHHHHh
Q 047954 422 GFSSLVAQP------IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVR 494 (582)
Q Consensus 422 G~a~~~~~~------~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~ 494 (582)
|+++..... ....+++.|+|||.+.+..++.++||||||+++|||+| |+.||... ....+...+ .
T Consensus 188 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~----~~~~~~~~~----~ 259 (327)
T 2yfx_A 188 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK----SNQEVLEFV----T 259 (327)
T ss_dssp HHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC----CHHHHHHHH----H
T ss_pred ccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCc----CHHHHHHHH----h
Confidence 998754322 22345678999999988899999999999999999998 99998642 122222222 1
Q ss_pred hcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCC
Q 047954 495 EEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTE 551 (582)
Q Consensus 495 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 551 (582)
....... .. .....+.+++.+||+.||++|||+.+++++|+.+....
T Consensus 260 ~~~~~~~-~~---------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 260 SGGRMDP-PK---------NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp TTCCCCC-CT---------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred cCCCCCC-CC---------CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 1111110 00 11125788999999999999999999999999887543
No 173
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.7e-40 Score=350.81 Aligned_cols=247 Identities=20% Similarity=0.311 Sum_probs=187.4
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCC--------cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEE
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK--------PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVY 343 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 343 (582)
.+.||+|+||.||+|... +++.||||++.... ......+.+|+.++++++||||+++++++. .+..++||
T Consensus 140 ~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~lv~ 218 (419)
T 3i6u_A 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVL 218 (419)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SSEEEEEE
T ss_pred EeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCceEEEE
Confidence 467999999999999865 56889999986421 111235789999999999999999999975 45689999
Q ss_pred EeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCC---CceEEee
Q 047954 344 KFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDN---EMVLVSD 420 (582)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~---~~~kl~D 420 (582)
||+++|+|.+++... ..+++..+..++.|++.||+|||+++ |+||||||+|||++.+ ..+||+|
T Consensus 219 e~~~~g~L~~~l~~~------~~~~~~~~~~i~~qi~~~l~~LH~~~-------ivHrDlkp~NIll~~~~~~~~~kl~D 285 (419)
T 3i6u_A 219 ELMEGGELFDKVVGN------KRLKEATCKLYFYQMLLAVQYLHENG-------IIHRDLKPENVLLSSQEEDCLIKITD 285 (419)
T ss_dssp ECCTTCBGGGGTSSS------CCCCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCCGGGEEESSSSSSCCEEECC
T ss_pred EcCCCCcHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHCC-------ccccCCChHhEEEecCCCcceEEEee
Confidence 999999999988643 25889999999999999999999998 9999999999999754 4599999
Q ss_pred ccccccccCcc---cccccccccCCCCCCC---CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHh
Q 047954 421 YGFSSLVAQPI---AAQRMISYKSPEYQSS---KKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVR 494 (582)
Q Consensus 421 fG~a~~~~~~~---~~~~~~~y~aPE~~~~---~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 494 (582)
||+++...... ...+++.|+|||++.+ ..++.++|||||||++|||+||+.||..... ...+...+.
T Consensus 286 FG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~---~~~~~~~i~---- 358 (419)
T 3i6u_A 286 FGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT---QVSLKDQIT---- 358 (419)
T ss_dssp SSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSS---SCCHHHHHH----
T ss_pred cccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcc---hHHHHHHHh----
Confidence 99998875432 3347889999999853 5788999999999999999999999975322 122222221
Q ss_pred hcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhc
Q 047954 495 EEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547 (582)
Q Consensus 495 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 547 (582)
..... . .+.. ......++.+++.+||+.||++|||++|+++|.|.-
T Consensus 359 ~~~~~-~-~~~~-----~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~ 404 (419)
T 3i6u_A 359 SGKYN-F-IPEV-----WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 404 (419)
T ss_dssp TTCCC-C-CHHH-----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred cCCCC-C-Cchh-----hcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccC
Confidence 11110 0 0000 001123578899999999999999999999998753
No 174
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=8.8e-41 Score=342.17 Aligned_cols=254 Identities=21% Similarity=0.353 Sum_probs=200.4
Q ss_pred cccccccCceEEEEEEEcCC------ceEEEEEecCCC-cchHHHHHHHHHHHhcC-CCCCccccceEEEeCCeeEEEEE
Q 047954 273 AEGLGKGIFGNSYKALLEGR------APVVVKRLRDLK-PLITEEFRKQLLVIADQ-KHPNLLPLLAYYFSNDEKLLVYK 344 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~~------~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e 344 (582)
.+.||+|+||.||+|..... ..||+|.+.... ....+.+.+|+.+++++ +||||+++++++...+..++|||
T Consensus 51 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 130 (333)
T 2i1m_A 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130 (333)
T ss_dssp EEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEe
Confidence 57899999999999996532 369999997543 33456789999999999 89999999999999999999999
Q ss_pred eCCCCChHHHHhcCCCC--------CCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCce
Q 047954 345 FAGNGNLFNRIHGGKSS--------KNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMV 416 (582)
Q Consensus 345 ~~~~gsL~~~l~~~~~~--------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~ 416 (582)
|+++|+|.+++...... .....+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+
T Consensus 131 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-------ivH~Dlkp~NIl~~~~~~~ 203 (333)
T 2i1m_A 131 YCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN-------CIHRDVAARNVLLTNGHVA 203 (333)
T ss_dssp CCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCSGGGCEEEGGGEE
T ss_pred cCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC-------cccCCcccceEEECCCCeE
Confidence 99999999998753210 00124788999999999999999999998 9999999999999999999
Q ss_pred EEeeccccccccCcc------cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHH
Q 047954 417 LVSDYGFSSLVAQPI------AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWV 489 (582)
Q Consensus 417 kl~DfG~a~~~~~~~------~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~ 489 (582)
||+|||+++...... ...++..|+|||.+.+..++.++|||||||++|||+| |..||..... ...+
T Consensus 204 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~---~~~~---- 276 (333)
T 2i1m_A 204 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV---NSKF---- 276 (333)
T ss_dssp EBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCS---SHHH----
T ss_pred EECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccch---hHHH----
Confidence 999999998664322 2234568999999988899999999999999999999 9999964321 1111
Q ss_pred HHHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccC
Q 047954 490 LRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVT 550 (582)
Q Consensus 490 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 550 (582)
............ .. .....+.+++.+||+.||++|||+.||+++|+.+...
T Consensus 277 ~~~~~~~~~~~~-~~---------~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 327 (333)
T 2i1m_A 277 YKLVKDGYQMAQ-PA---------FAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327 (333)
T ss_dssp HHHHHHTCCCCC-CT---------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCC-CC---------CCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence 122222211110 00 0112578899999999999999999999999987643
No 175
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2.5e-40 Score=338.00 Aligned_cols=255 Identities=23% Similarity=0.394 Sum_probs=198.3
Q ss_pred cccccccCceEEEEEEEc-CCce--EEEEEecCC-CcchHHHHHHHHHHHhcC-CCCCccccceEEEeCCeeEEEEEeCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAP--VVVKRLRDL-KPLITEEFRKQLLVIADQ-KHPNLLPLLAYYFSNDEKLLVYKFAG 347 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~--vavK~~~~~-~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~ 347 (582)
.+.||+|+||.||+|... ++.. ||+|.+... .....+.+.+|++++.++ +||||+++++++...+..++||||++
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~ 109 (327)
T 1fvr_A 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 109 (327)
T ss_dssp EEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred eeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCC
Confidence 578999999999999965 4443 489988643 233456789999999999 99999999999999999999999999
Q ss_pred CCChHHHHhcCCC----------CCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceE
Q 047954 348 NGNLFNRIHGGKS----------SKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVL 417 (582)
Q Consensus 348 ~gsL~~~l~~~~~----------~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~k 417 (582)
+|+|.+++..... ......+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+|
T Consensus 110 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-------ivH~dlkp~NIl~~~~~~~k 182 (327)
T 1fvr_A 110 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-------FIHRDLAARNILVGENYVAK 182 (327)
T ss_dssp TCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCSGGGEEECGGGCEE
T ss_pred CCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-------ccCCCCccceEEEcCCCeEE
Confidence 9999999975430 001235889999999999999999999998 99999999999999999999
Q ss_pred EeeccccccccCc---ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHHHHHH
Q 047954 418 VSDYGFSSLVAQP---IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAV 493 (582)
Q Consensus 418 l~DfG~a~~~~~~---~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~ 493 (582)
|+|||+++..... ....++..|+|||.+.+..++.++|||||||++|||+| |+.||.... ... +...+
T Consensus 183 L~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~----~~~----~~~~~ 254 (327)
T 1fvr_A 183 IADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT----CAE----LYEKL 254 (327)
T ss_dssp ECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC----HHH----HHHHG
T ss_pred EcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCc----HHH----HHHHh
Confidence 9999998754322 22335678999999988889999999999999999998 999996432 111 11222
Q ss_pred hhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCCC
Q 047954 494 REEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTES 552 (582)
Q Consensus 494 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 552 (582)
........ . .....++.+++.+||+.||++|||+.|++++|+.+.....
T Consensus 255 ~~~~~~~~-~---------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 255 PQGYRLEK-P---------LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp GGTCCCCC-C---------TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred hcCCCCCC-C---------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 22111110 0 0111257889999999999999999999999998876544
No 176
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=9.7e-40 Score=326.36 Aligned_cols=246 Identities=19% Similarity=0.316 Sum_probs=196.3
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCC------cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEe
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK------PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKF 345 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~------~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 345 (582)
.+.||+|+||.||+|... +++.||+|.++... ....+.+.+|+.++++++||||+++++++......++||||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 89 (283)
T 3bhy_A 10 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILEL 89 (283)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred HHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEee
Confidence 467999999999999976 57899999986432 12467899999999999999999999999999999999999
Q ss_pred CCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCC----ceEEeec
Q 047954 346 AGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNE----MVLVSDY 421 (582)
Q Consensus 346 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~----~~kl~Df 421 (582)
+++++|.+++.... .+++..++.++.||+.||.|||+.+ |+||||||+||+++.++ .+||+||
T Consensus 90 ~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~-------i~H~dl~p~Nil~~~~~~~~~~~kl~df 156 (283)
T 3bhy_A 90 VSGGELFDFLAEKE------SLTEDEATQFLKQILDGVHYLHSKR-------IAHFDLKPENIMLLDKNVPNPRIKLIDF 156 (283)
T ss_dssp CCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCSGGGEEESCSSSSSCCEEECCC
T ss_pred cCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCC-------ccCCCCChHHEEEecCCCCCCceEEEec
Confidence 99999999996432 4889999999999999999999998 99999999999998877 7999999
Q ss_pred cccccccCcc---cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhccc
Q 047954 422 GFSSLVAQPI---AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWT 498 (582)
Q Consensus 422 G~a~~~~~~~---~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (582)
|++....... ...++..|+|||.+.+..++.++||||||+++|||++|+.||.... ..... ........
T Consensus 157 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~~~---~~~~~~~~- 228 (283)
T 3bhy_A 157 GIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGET----KQETL---TNISAVNY- 228 (283)
T ss_dssp TTCEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSS----HHHHH---HHHHTTCC-
T ss_pred ccceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcc----hHHHH---HHhHhccc-
Confidence 9998764432 2347788999999998899999999999999999999999996422 11111 11111100
Q ss_pred ccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhh
Q 047954 499 AEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEI 546 (582)
Q Consensus 499 ~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 546 (582)
..+... .......+.+++.+||..||++|||+.|++++.+.
T Consensus 229 --~~~~~~-----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~ 269 (283)
T 3bhy_A 229 --DFDEEY-----FSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWI 269 (283)
T ss_dssp --CCCHHH-----HTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHH
T ss_pred --CCcchh-----cccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHH
Confidence 001100 00112357889999999999999999999998653
No 177
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=5.8e-40 Score=331.15 Aligned_cols=248 Identities=21% Similarity=0.330 Sum_probs=194.4
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCCh
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNL 351 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 351 (582)
.+.||+|+||.||+|... ++..||+|++........+.+.+|+.++++++||||+++++++...+..++||||+++++|
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l 103 (302)
T 2j7t_A 24 VGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAV 103 (302)
T ss_dssp EEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEH
T ss_pred cceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcH
Confidence 467999999999999976 4788999999766666678899999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccC--
Q 047954 352 FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ-- 429 (582)
Q Consensus 352 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~-- 429 (582)
.+++.... ..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 104 ~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~-------i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 171 (302)
T 2j7t_A 104 DAIMLELD-----RGLTEPQIQVVCRQMLEALNFLHSKR-------IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL 171 (302)
T ss_dssp HHHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHHTT-------CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH
T ss_pred HHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHhcCC-------cccCCCCHHHEEECCCCCEEEEECCCCccccccc
Confidence 99886532 24889999999999999999999998 99999999999999999999999998754321
Q ss_pred --cccccccccccCCCCC-----CCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhccccccc
Q 047954 430 --PIAAQRMISYKSPEYQ-----SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIF 502 (582)
Q Consensus 430 --~~~~~~~~~y~aPE~~-----~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (582)
.....++..|+|||++ ....++.++||||||+++|||++|+.||.... ............ .....
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-------~~~~~~~~~~~~-~~~~~ 243 (302)
T 2j7t_A 172 QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN-------PMRVLLKIAKSD-PPTLL 243 (302)
T ss_dssp HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSC-------HHHHHHHHHHSC-CCCCS
T ss_pred cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCC-------HHHHHHHHhccC-CcccC
Confidence 2234577889999987 46778999999999999999999999996421 111122221111 11111
Q ss_pred chhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 503 DSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 503 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
.+ ......+.+++.+||+.||++|||+.|+++|.+...
T Consensus 244 ~~--------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~ 281 (302)
T 2j7t_A 244 TP--------SKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSS 281 (302)
T ss_dssp SG--------GGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTT
T ss_pred Cc--------cccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhh
Confidence 10 011225788999999999999999999999876443
No 178
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=7.2e-40 Score=354.03 Aligned_cols=250 Identities=18% Similarity=0.232 Sum_probs=200.2
Q ss_pred ccccccCceEEEEEEEc-CCceEEEEEecCCC---cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCC
Q 047954 274 EGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK---PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNG 349 (582)
Q Consensus 274 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 349 (582)
+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 191 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg 270 (543)
T 3c4z_A 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGG 270 (543)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccCC
Confidence 57999999999999975 58899999996421 223467889999999999999999999999999999999999999
Q ss_pred ChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccC
Q 047954 350 NLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ 429 (582)
Q Consensus 350 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~ 429 (582)
+|.+++...... ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.+..
T Consensus 271 ~L~~~l~~~~~~--~~~l~e~~~~~~~~qi~~aL~~LH~~g-------IvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 271 DIRYHIYNVDED--NPGFQEPRAIFYTAQIVSGLEHLHQRN-------IIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp BHHHHHHTSSTT--SCSCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred CHHHHHHHhhcc--cccccHHHHHHHHHHHHHHHHHHHHcC-------CcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 999999754321 235889999999999999999999998 99999999999999999999999999987654
Q ss_pred cc----cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccchh
Q 047954 430 PI----AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSE 505 (582)
Q Consensus 430 ~~----~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 505 (582)
.. ...+|+.|+|||++.+..++.++|||||||++|||+||+.||...........+...+ .... . .. ..
T Consensus 342 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i---~~~~-~-~~-p~- 414 (543)
T 3c4z_A 342 GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV---LEQA-V-TY-PD- 414 (543)
T ss_dssp TCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHH---HHCC-C-CC-CT-
T ss_pred CCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHH---hhcc-c-CC-Cc-
Confidence 32 2367899999999999999999999999999999999999997543221112222211 1111 0 00 00
Q ss_pred hhhhhchHHHHHHHHHHHHHcccCCCCCCCCh-----HHHHHHHhhc
Q 047954 506 ISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEM-----AEVVSELEII 547 (582)
Q Consensus 506 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~-----~evl~~L~~i 547 (582)
.....+.+++.+||+.||++||++ ++|++|.+.-
T Consensus 415 --------~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~ 453 (543)
T 3c4z_A 415 --------KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFR 453 (543)
T ss_dssp --------TSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGT
T ss_pred --------ccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCcccc
Confidence 111257789999999999999965 7888876643
No 179
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.7e-39 Score=341.92 Aligned_cols=274 Identities=21% Similarity=0.367 Sum_probs=189.9
Q ss_pred ChhHhhhcccccccccCceEEEEEEEc---CCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEe--CCe
Q 047954 264 KLNDLLKAPAEGLGKGIFGNSYKALLE---GRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS--NDE 338 (582)
Q Consensus 264 ~~~~l~~~~~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~--~~~ 338 (582)
.+.+.....+++||+|+||.||+|+.. ++..||||++.... ..+.+.+|+.++++++|||||++++++.. ...
T Consensus 17 ~~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 94 (405)
T 3rgf_A 17 RVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRK 94 (405)
T ss_dssp CHHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTE
T ss_pred hhhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCe
Confidence 345555555678999999999999975 46789999996532 33568899999999999999999999965 567
Q ss_pred eEEEEEeCCCCChHHHHhcCCC---CCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeee----c
Q 047954 339 KLLVYKFAGNGNLFNRIHGGKS---SKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILL----D 411 (582)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~---~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl----~ 411 (582)
.++||||+. |+|.+++..... ......+++..++.|+.||+.||+|||+.+ |+||||||+|||+ +
T Consensus 95 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-------ivH~Dlkp~NIll~~~~~ 166 (405)
T 3rgf_A 95 VWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW-------VLHRDLKPANILVMGEGP 166 (405)
T ss_dssp EEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT-------CCCCCCCGGGEEECCSST
T ss_pred EEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-------EeCCCcCHHHeEEecCCC
Confidence 899999996 588887753211 111234889999999999999999999998 9999999999999 7
Q ss_pred CCCceEEeeccccccccCc-------ccccccccccCCCCCCCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCC--
Q 047954 412 DNEMVLVSDYGFSSLVAQP-------IAAQRMISYKSPEYQSSK-KISRKSDVWSFGCLLLELLTGRISTHSAPQGIN-- 481 (582)
Q Consensus 412 ~~~~~kl~DfG~a~~~~~~-------~~~~~~~~y~aPE~~~~~-~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~-- 481 (582)
.++.+||+|||+++..... ....+|+.|+|||++.+. .++.++|||||||++|||+||+.||........
T Consensus 167 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~ 246 (405)
T 3rgf_A 167 ERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTS 246 (405)
T ss_dssp TTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------
T ss_pred CCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcccccccc
Confidence 7889999999999876532 223467889999998874 589999999999999999999999975432110
Q ss_pred ---ccchHHHHHHHHhhccc---ccc---c----------chhhhhhhchH--------HHHHHHHHHHHHcccCCCCCC
Q 047954 482 ---GADLCSWVLRAVREEWT---AEI---F----------DSEISVQRSAA--------HGMLKLLQVAIQCCNKSPEKR 534 (582)
Q Consensus 482 ---~~~~~~~~~~~~~~~~~---~~~---~----------d~~~~~~~~~~--------~~~~~l~~l~~~Cl~~dP~~R 534 (582)
..+....+...+..... ..+ . ..... ..... .....+.+|+.+||+.||++|
T Consensus 247 ~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R 325 (405)
T 3rgf_A 247 NPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYT-NCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKR 325 (405)
T ss_dssp CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGT-TCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGS
T ss_pred ccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCC-cchhhhhHhhcCCCCCHHHHHHHHHHccCCcccC
Confidence 01112222111110000 000 0 00000 00000 002357789999999999999
Q ss_pred CChHHHHHHHhhcc
Q 047954 535 PEMAEVVSELEIIK 548 (582)
Q Consensus 535 Ps~~evl~~L~~i~ 548 (582)
||++|+++|.|...
T Consensus 326 ~ta~e~L~hp~f~~ 339 (405)
T 3rgf_A 326 ITSEQAMQDPYFLE 339 (405)
T ss_dssp CCHHHHHTSGGGTS
T ss_pred CCHHHHhcChhhcc
Confidence 99999999998754
No 180
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.1e-39 Score=351.40 Aligned_cols=247 Identities=23% Similarity=0.326 Sum_probs=200.1
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCC---cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK---PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 348 (582)
.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++|||||++++++...+..++||||+.+
T Consensus 31 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 110 (484)
T 3nyv_A 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 110 (484)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred eeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCC
Confidence 467999999999999975 67899999985432 34567899999999999999999999999999999999999999
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeee---cCCCceEEeeccccc
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILL---DDNEMVLVSDYGFSS 425 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl---~~~~~~kl~DfG~a~ 425 (582)
|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||+ +.++.+||+|||+++
T Consensus 111 ~~L~~~~~~~~------~~~~~~~~~i~~qi~~~l~~lH~~~-------ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 177 (484)
T 3nyv_A 111 GELFDEIISRK------RFSEVDAARIIRQVLSGITYMHKNK-------IVHRDLKPENLLLESKSKDANIRIIDFGLST 177 (484)
T ss_dssp CBHHHHHHTCS------CCBHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred CCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------eeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence 99999997542 4889999999999999999999998 9999999999999 567889999999998
Q ss_pred cccCcc---cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhccccccc
Q 047954 426 LVAQPI---AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIF 502 (582)
Q Consensus 426 ~~~~~~---~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (582)
...... ...+++.|+|||++.+ .++.++||||+||++|+|++|+.||... ...++...+. ........
T Consensus 178 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~----~~~~~~~~i~---~~~~~~~~- 248 (484)
T 3nyv_A 178 HFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGA----NEYDILKKVE---KGKYTFEL- 248 (484)
T ss_dssp HBCCCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS----SHHHHHHHHH---HCCCCCCS-
T ss_pred EcccccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCC----CHHHHHHHHH---cCCCCCCC-
Confidence 765432 3347889999998876 6899999999999999999999999643 2222222221 11111110
Q ss_pred chhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 503 DSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 503 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
+. ......++.+++.+||+.||++|||+.|+++|.|...
T Consensus 249 -~~------~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~ 287 (484)
T 3nyv_A 249 -PQ------WKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQT 287 (484)
T ss_dssp -GG------GGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHH
T ss_pred -cc------cccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhcc
Confidence 00 0011235778999999999999999999999988654
No 181
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.6e-39 Score=347.84 Aligned_cols=254 Identities=15% Similarity=0.199 Sum_probs=197.4
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCCCcchHHHHHHHHHHHhcCCC-CCccccceEEEeCCeeEEEEEeCCCCC
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKH-PNLLPLLAYYFSNDEKLLVYKFAGNGN 350 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H-~niv~l~~~~~~~~~~~lv~e~~~~gs 350 (582)
.+.||+|+||.||+|.. .++..||||++..... .+.+..|++++..++| ++|..+..++...+..++||||+ +++
T Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~s 88 (483)
T 3sv0_A 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPS 88 (483)
T ss_dssp CCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCC
Confidence 46799999999999996 5688999998764332 2357889999999987 55555566667778889999999 999
Q ss_pred hHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeee---cCCCceEEeeccccccc
Q 047954 351 LFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILL---DDNEMVLVSDYGFSSLV 427 (582)
Q Consensus 351 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl---~~~~~~kl~DfG~a~~~ 427 (582)
|.+++..... .+++..++.|+.||+.||+|||+++ ||||||||+|||+ +.++.+||+|||+++.+
T Consensus 89 L~~ll~~~~~-----~l~~~~~~~i~~qi~~aL~yLH~~g-------IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 156 (483)
T 3sv0_A 89 LEDLFNFCSR-----KLSLKTVLMLADQMINRVEFVHSKS-------FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY 156 (483)
T ss_dssp HHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred HHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC-------EeecccCcceEEEecCCCCCeEEEEeCCcceec
Confidence 9999975332 4899999999999999999999998 9999999999999 68899999999999876
Q ss_pred cCcc-----------cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhc
Q 047954 428 AQPI-----------AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREE 496 (582)
Q Consensus 428 ~~~~-----------~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 496 (582)
.... ...++..|+|||++.+..++.++|||||||++|||++|+.||...... ........+.......
T Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~-~~~~~~~~i~~~~~~~ 235 (483)
T 3sv0_A 157 RDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG-TKKQKYEKISEKKVAT 235 (483)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCS-SHHHHHHHHHHHHHHS
T ss_pred cCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccch-hHHHHHHHHhhccccc
Confidence 5432 345778999999999999999999999999999999999999754322 1111111111111111
Q ss_pred ccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCCC
Q 047954 497 WTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTES 552 (582)
Q Consensus 497 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 552 (582)
....+ ......++.+++..||+.||++||++.+|++.|+.+.....
T Consensus 236 ~~~~l----------~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~ 281 (483)
T 3sv0_A 236 SIEAL----------CRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREG 281 (483)
T ss_dssp CHHHH----------HTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred cHHHH----------hcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcC
Confidence 00000 00112368899999999999999999999999998865443
No 182
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1e-40 Score=347.16 Aligned_cols=251 Identities=13% Similarity=0.081 Sum_probs=178.7
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCCc---chHHHHHHHH---HHHhcCCCCCccccc-------eEEEeC--
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKP---LITEEFRKQL---LVIADQKHPNLLPLL-------AYYFSN-- 336 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~---~~l~~l~H~niv~l~-------~~~~~~-- 336 (582)
.+.||+|+||.||+|... +++.||||++..... ...+.+.+|+ .+|+. +||||++++ +++...
T Consensus 67 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~~ 145 (371)
T 3q60_A 67 VEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAVQSQ 145 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEETTS
T ss_pred eeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheecCCC
Confidence 468999999999999965 678999999976432 2345677775 45555 799988755 444433
Q ss_pred ---------------CeeEEEEEeCCCCChHHHHhcCCCCCCCCccchHHH------HHHHHHHHHHHHHHhccCCCCCC
Q 047954 337 ---------------DEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSR------LLVARGVARALEYLHHKDKSRTQ 395 (582)
Q Consensus 337 ---------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~------~~i~~~ia~gL~yLH~~~~~~~~ 395 (582)
...++||||++ |+|.+++..... .+.+..+ +.++.||+.||+|||+++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-----~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~----- 214 (371)
T 3q60_A 146 PPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF-----VYVFRGDEGILALHILTAQLIRLAANLQSKG----- 214 (371)
T ss_dssp CSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH-----SCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT-----
T ss_pred CCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc-----ccchhhhhhhhhHHHHHHHHHHHHHHHHHCC-----
Confidence 23799999998 899999975421 2445555 788899999999999998
Q ss_pred CcceecCCCCCCeeecCCCceEEeeccccccccCcc-cccccccccCCCCCCC--CCCCcchhHHHHHHHHHHHHhCCCC
Q 047954 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPI-AAQRMISYKSPEYQSS--KKISRKSDVWSFGCLLLELLTGRIS 472 (582)
Q Consensus 396 ~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~~~-~~~~~~~y~aPE~~~~--~~~~~k~DVwS~Gvvl~elltG~~P 472 (582)
|+||||||+|||++.++.+||+|||+++...... ...+++.|+|||++.+ ..++.++|||||||++|||+||+.|
T Consensus 215 --ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~P 292 (371)
T 3q60_A 215 --LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP 292 (371)
T ss_dssp --EEETTCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCS
T ss_pred --CccCcCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999998876654 4556789999999987 6799999999999999999999999
Q ss_pred CCCCCCCCCccchHHHHHHHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhc
Q 047954 473 THSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547 (582)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 547 (582)
|.......... ... . ............+. .......+.+++.+||+.||++|||+.|+++|.+.-
T Consensus 293 f~~~~~~~~~~-~~~-~--~~~~~~~~~~~~~~------~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~ 357 (371)
T 3q60_A 293 FGLVTPGIKGS-WKR-P--SLRVPGTDSLAFGS------CTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFL 357 (371)
T ss_dssp TTBCCTTCTTC-CCB-C--CTTSCCCCSCCCTT------SSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHH
T ss_pred CCCcCcccccc-hhh-h--hhhhccccccchhh------ccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHH
Confidence 97643221100 000 0 00000000000000 001123678899999999999999999999887643
No 183
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=2.7e-39 Score=348.57 Aligned_cols=248 Identities=22% Similarity=0.307 Sum_probs=198.6
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCC--CcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDL--KPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNG 349 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 349 (582)
.+.||+|+||+||+|... +++.||||++... .....+.+.+|+.++++++|||||++++++.+....++||||+.+|
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~ 106 (486)
T 3mwu_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG 106 (486)
T ss_dssp EEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCC
Confidence 468999999999999975 6788999998532 2234678899999999999999999999999999999999999999
Q ss_pred ChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeec---CCCceEEeecccccc
Q 047954 350 NLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLD---DNEMVLVSDYGFSSL 426 (582)
Q Consensus 350 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~---~~~~~kl~DfG~a~~ 426 (582)
+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++ .++.+||+|||+++.
T Consensus 107 ~L~~~~~~~~------~~~~~~~~~i~~qi~~al~~lH~~~-------ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 173 (486)
T 3mwu_A 107 ELFDEIIKRK------RFSEHDAARIIKQVFSGITYMHKHN-------IVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (486)
T ss_dssp BHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred cHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------eEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence 9999886532 4889999999999999999999998 99999999999995 456799999999987
Q ss_pred ccCcc---cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccc
Q 047954 427 VAQPI---AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFD 503 (582)
Q Consensus 427 ~~~~~---~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 503 (582)
..... ...+++.|+|||++.+ .++.++||||+||++|+|++|+.||.... ..++...+ ....+....
T Consensus 174 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~----~~~~~~~i---~~~~~~~~~-- 243 (486)
T 3mwu_A 174 FQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN----EYDILKRV---ETGKYAFDL-- 243 (486)
T ss_dssp BCCC----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHH---HHTCCCSCS--
T ss_pred CCCCCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHH---HhCCCCCCC--
Confidence 65432 3457889999999876 59999999999999999999999996432 22222222 111111110
Q ss_pred hhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhccc
Q 047954 504 SEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKV 549 (582)
Q Consensus 504 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 549 (582)
+.. .....++.+++.+||+.||++|||+.|+++|.|....
T Consensus 244 ~~~------~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~ 283 (486)
T 3mwu_A 244 PQW------RTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283 (486)
T ss_dssp GGG------GGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHT
T ss_pred ccc------CCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccC
Confidence 000 0112257789999999999999999999999886543
No 184
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=4.4e-40 Score=352.11 Aligned_cols=183 Identities=20% Similarity=0.385 Sum_probs=147.2
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCC--CcchHHHHHHHHHHHhcCCCCCccccceEEEeC-----CeeEEEEE
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDL--KPLITEEFRKQLLVIADQKHPNLLPLLAYYFSN-----DEKLLVYK 344 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~~~lv~e 344 (582)
.+.||+|+||+||+|... +++.||||++... .....+.+.+|+.+|++++|||||++++++... ...|+|||
T Consensus 58 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 137 (458)
T 3rp9_A 58 RHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLE 137 (458)
T ss_dssp CCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEC
T ss_pred eeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEe
Confidence 578999999999999865 6788999998653 233456789999999999999999999999543 46899999
Q ss_pred eCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccc
Q 047954 345 FAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS 424 (582)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a 424 (582)
|+ +|+|.+++... ..+++..+..++.||+.||+|||+.+ ||||||||+|||++.++.+||+|||+|
T Consensus 138 ~~-~~~L~~~~~~~------~~l~~~~~~~~~~qi~~aL~~LH~~~-------iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 138 IA-DSDFKKLFRTP------VYLTELHIKTLLYNLLVGVKYVHSAG-------ILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp CC-SEEHHHHHHSS------CCCCHHHHHHHHHHHHHHHHHHHHTT-------CBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred cc-ccchhhhcccC------CCCCHHHHHHHHHHHHHHHHHHHhCC-------cCCCCCChhhEEECCCCCEeecccccc
Confidence 98 57999998743 24889999999999999999999998 999999999999999999999999999
Q ss_pred ccccCc-------------------------------ccccccccccCCCCC-CCCCCCcchhHHHHHHHHHHHHhC
Q 047954 425 SLVAQP-------------------------------IAAQRMISYKSPEYQ-SSKKISRKSDVWSFGCLLLELLTG 469 (582)
Q Consensus 425 ~~~~~~-------------------------------~~~~~~~~y~aPE~~-~~~~~~~k~DVwS~Gvvl~elltG 469 (582)
+..... ....+|..|+|||++ ....++.++|||||||++|||+||
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 876422 122357889999975 566799999999999999999994
No 185
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.7e-39 Score=335.76 Aligned_cols=257 Identities=17% Similarity=0.307 Sum_probs=190.7
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCC--CcchHHHHHHHHHHHhcCCCCCccccceEEEeCC------eeEEEE
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDL--KPLITEEFRKQLLVIADQKHPNLLPLLAYYFSND------EKLLVY 343 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------~~~lv~ 343 (582)
.+.||+|+||.||+|.. .+++.||||++... .....+.+.+|+.++++++||||+++++++.... ..++||
T Consensus 30 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~ 109 (367)
T 1cm8_A 30 LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVM 109 (367)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEE
T ss_pred eEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEE
Confidence 46799999999999996 46889999998543 2334567889999999999999999999998753 459999
Q ss_pred EeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccc
Q 047954 344 KFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGF 423 (582)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~ 423 (582)
||+ +++|.+++... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 110 e~~-~~~L~~~~~~~-------~l~~~~~~~~~~qi~~~L~~LH~~~-------ivH~Dlkp~NIll~~~~~~kl~Dfg~ 174 (367)
T 1cm8_A 110 PFM-GTDLGKLMKHE-------KLGEDRIQFLVYQMLKGLRYIHAAG-------IIHRDLKPGNLAVNEDCELKILDFGL 174 (367)
T ss_dssp ECC-SEEHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCCGGGEEECTTCCEEECCCTT
T ss_pred ecC-CCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCC-------ccccCcCHHHEEEcCCCCEEEEeeec
Confidence 999 88999998752 4788899999999999999999998 99999999999999999999999999
Q ss_pred cccccCc-ccccccccccCCCCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhc---cc
Q 047954 424 SSLVAQP-IAAQRMISYKSPEYQSS-KKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREE---WT 498 (582)
Q Consensus 424 a~~~~~~-~~~~~~~~y~aPE~~~~-~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~---~~ 498 (582)
++..... ....+|..|+|||++.+ ..++.++||||+||++|||++|+.||.... ..+....+....... ..
T Consensus 175 a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~----~~~~l~~i~~~~g~~~~~~~ 250 (367)
T 1cm8_A 175 ARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSD----HLDQLKEIMKVTGTPPAEFV 250 (367)
T ss_dssp CEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHHHHHHCCCCHHHH
T ss_pred ccccccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHHhcCCCCHHHH
Confidence 9876543 23457889999998876 679999999999999999999999996432 122222221111100 00
Q ss_pred ccccchhh-------------hhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 499 AEIFDSEI-------------SVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 499 ~~~~d~~~-------------~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
..+..... ............+.+|+.+||..||++|||++|+++|.+.-.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~ 313 (367)
T 1cm8_A 251 QRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFES 313 (367)
T ss_dssp HTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTT
T ss_pred HHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHh
Confidence 00000000 000000111235788999999999999999999999977543
No 186
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=6.4e-40 Score=336.92 Aligned_cols=247 Identities=21% Similarity=0.324 Sum_probs=193.6
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCCcchHHHHHHHHHHHhcC-CCCCccccceEEEeCCeeEEEEEeCCCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKPLITEEFRKQLLVIADQ-KHPNLLPLLAYYFSNDEKLLVYKFAGNGN 350 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~gs 350 (582)
.+.||+|+||.||+|... +++.||||++...... ..+|++++.++ +||||+++++++.+.+..++||||+++|+
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~ 102 (342)
T 2qr7_A 27 KEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGE 102 (342)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCc
Confidence 467999999999999975 5788999999754332 34678888887 89999999999999999999999999999
Q ss_pred hHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCC----CceEEeecccccc
Q 047954 351 LFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDN----EMVLVSDYGFSSL 426 (582)
Q Consensus 351 L~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~----~~~kl~DfG~a~~ 426 (582)
|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||+.++ +.+||+|||+++.
T Consensus 103 L~~~i~~~~------~~~~~~~~~~~~qi~~al~~lH~~g-------ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~ 169 (342)
T 2qr7_A 103 LLDKILRQK------FFSEREASAVLFTITKTVEYLHAQG-------VVHRDLKPSNILYVDESGNPESIRICDFGFAKQ 169 (342)
T ss_dssp HHHHHHTCT------TCCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCCGGGEEESSSSCSGGGEEECCCTTCEE
T ss_pred HHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------cEeccCCHHHEEEecCCCCcCeEEEEECCCccc
Confidence 999997532 4889999999999999999999998 9999999999998543 3599999999987
Q ss_pred ccCcc----cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhccccccc
Q 047954 427 VAQPI----AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIF 502 (582)
Q Consensus 427 ~~~~~----~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (582)
..... ...+|+.|+|||++.+..++.++|||||||++|||++|+.||..... ... ..+...+...... ..
T Consensus 170 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~----~~~-~~~~~~i~~~~~~-~~ 243 (342)
T 2qr7_A 170 LRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD----DTP-EEILARIGSGKFS-LS 243 (342)
T ss_dssp CBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT----SCH-HHHHHHHHHCCCC-CC
T ss_pred CcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc----CCH-HHHHHHHccCCcc-cC
Confidence 64432 33467889999999887889999999999999999999999974321 111 1122222221111 00
Q ss_pred chhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 503 DSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 503 d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
.. . ......++.+++.+||..||++|||+.|+++|.|...
T Consensus 244 ~~-~-----~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~ 283 (342)
T 2qr7_A 244 GG-Y-----WNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVH 283 (342)
T ss_dssp ST-T-----TTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHT
T ss_pred cc-c-----cccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecC
Confidence 00 0 0011225778999999999999999999999988643
No 187
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=9.5e-40 Score=334.38 Aligned_cols=259 Identities=20% Similarity=0.318 Sum_probs=195.2
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCCc--chHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKP--LITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNG 349 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 349 (582)
.+.||+|+||.||+|... +++.||||++..... ...+.+.+|+.++++++||||+++++++...+..++||||++++
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 109 (331)
T 4aaa_A 30 LGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHT 109 (331)
T ss_dssp EEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred eeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcc
Confidence 468999999999999976 478899999864432 33466889999999999999999999999999999999999999
Q ss_pred ChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccC
Q 047954 350 NLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ 429 (582)
Q Consensus 350 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~ 429 (582)
+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 110 ~l~~~~~~~~------~~~~~~~~~~~~qi~~~l~~LH~~~-------ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 176 (331)
T 4aaa_A 110 ILDDLELFPN------GLDYQVVQKYLFQIINGIGFCHSHN-------IIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176 (331)
T ss_dssp HHHHHHHSTT------CCCHHHHHHHHHHHHHHHHHHHHTT-------CCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred hHHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHHHCC-------EEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence 9988775432 4889999999999999999999998 99999999999999999999999999977644
Q ss_pred c----ccccccccccCCCCCCCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhh---------
Q 047954 430 P----IAAQRMISYKSPEYQSSK-KISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVRE--------- 495 (582)
Q Consensus 430 ~----~~~~~~~~y~aPE~~~~~-~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~--------- 495 (582)
. ....++..|+|||.+.+. .++.++|||||||++|||++|+.||.... ..+....+......
T Consensus 177 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 252 (331)
T 4aaa_A 177 PGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDS----DIDQLYHIMMCLGNLIPRHQELF 252 (331)
T ss_dssp -------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS----HHHHHHHHHHHHCSCCHHHHHHH
T ss_pred CccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCC----cHHHHHHHHHHhCCCChhhhhHh
Confidence 3 233467889999998775 78999999999999999999999996432 11111111111000
Q ss_pred ---cccccccchhhh----hhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 496 ---EWTAEIFDSEIS----VQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 496 ---~~~~~~~d~~~~----~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
........+... ...........+.+++.+||+.||++|||+.|+++|.+.-.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~ 312 (331)
T 4aaa_A 253 NKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQM 312 (331)
T ss_dssp HHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHG
T ss_pred hhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhcc
Confidence 000000000000 00000112346889999999999999999999999987543
No 188
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=7.6e-40 Score=334.84 Aligned_cols=256 Identities=18% Similarity=0.269 Sum_probs=188.6
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCCc--chHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKP--LITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNG 349 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 349 (582)
.+.||+|+||.||+|... +++.||||+++.... ...+.+.+|+.++++++||||+++++++...+..++||||++ |
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 117 (329)
T 3gbz_A 39 ITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE-N 117 (329)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred EEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCC-C
Confidence 467999999999999854 678899999964432 234567899999999999999999999999999999999997 5
Q ss_pred ChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeee-----cCCCceEEeecccc
Q 047954 350 NLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILL-----DDNEMVLVSDYGFS 424 (582)
Q Consensus 350 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl-----~~~~~~kl~DfG~a 424 (582)
+|.+++.... .+++..++.++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||++
T Consensus 118 ~L~~~~~~~~------~~~~~~~~~i~~ql~~~l~~LH~~~-------ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a 184 (329)
T 3gbz_A 118 DLKKYMDKNP------DVSMRVIKSFLYQLINGVNFCHSRR-------CLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184 (329)
T ss_dssp EHHHHHHHCT------TCCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCCGGGEEEEC-----CCEEEECCTTHH
T ss_pred CHHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHHhCC-------EECCCCCHHHEEEecCCCCccceEEECcCCCc
Confidence 9999997543 4888999999999999999999998 9999999999999 45556999999999
Q ss_pred ccccCc----ccccccccccCCCCCCCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhccc-
Q 047954 425 SLVAQP----IAAQRMISYKSPEYQSSK-KISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWT- 498 (582)
Q Consensus 425 ~~~~~~----~~~~~~~~y~aPE~~~~~-~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~- 498 (582)
+..... ....++..|+|||++.+. .++.++|||||||++|||++|+.||.... ..+....+.........
T Consensus 185 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~----~~~~~~~~~~~~~~~~~~ 260 (329)
T 3gbz_A 185 RAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDS----EIDQLFKIFEVLGLPDDT 260 (329)
T ss_dssp HHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHHHHHHCCCCTT
T ss_pred cccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCC----HHHHHHHHHHHhCCCchh
Confidence 766432 223457889999998774 48999999999999999999999996432 11222222111110000
Q ss_pred ------------c---cccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhc
Q 047954 499 ------------A---EIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547 (582)
Q Consensus 499 ------------~---~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 547 (582)
. ......+.. ........++.+++.+||+.||++|||++|+++|.+.-
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~ 323 (329)
T 3gbz_A 261 TWPGVTALPDWKQSFPKFRGKTLKR-VLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFS 323 (329)
T ss_dssp TSTTGGGSTTCCTTCCCCCCCCHHH-HHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGS
T ss_pred hhhhhhhhhhhhhhhhhhccccHhh-hcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccC
Confidence 0 000000000 00000123678999999999999999999999987754
No 189
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=2e-39 Score=331.65 Aligned_cols=254 Identities=16% Similarity=0.284 Sum_probs=194.6
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCCCcchHHHHHHHHHHHhcCC-CCCccccceEEEe--CCeeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDLKPLITEEFRKQLLVIADQK-HPNLLPLLAYYFS--NDEKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~--~~~~~lv~e~~~~ 348 (582)
.+.||+|+||.||+|.. .+++.||||+++.. ..+.+.+|+.++++++ ||||+++++++.. ....++||||+.+
T Consensus 41 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~ 117 (330)
T 3nsz_A 41 VRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNN 117 (330)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCC
T ss_pred EEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCc
Confidence 46799999999999985 56789999998643 3577899999999997 9999999999998 5678999999999
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCC-ceEEeeccccccc
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNE-MVLVSDYGFSSLV 427 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~-~~kl~DfG~a~~~ 427 (582)
++|.+++. .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++ .+||+|||+++..
T Consensus 118 ~~l~~~~~---------~~~~~~~~~~~~qi~~~l~~lH~~~-------ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~ 181 (330)
T 3nsz_A 118 TDFKQLYQ---------TLTDYDIRFYMYEILKALDYCHSMG-------IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY 181 (330)
T ss_dssp CCHHHHGG---------GCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred hhHHHHHH---------hCCHHHHHHHHHHHHHHHHHHHhCC-------eeeCCCCHHHEEEcCCCCEEEEEeCCCceEc
Confidence 99999884 3778889999999999999999998 99999999999999776 8999999999876
Q ss_pred cCcc---cccccccccCCCCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhccccc---
Q 047954 428 AQPI---AAQRMISYKSPEYQSS-KKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAE--- 500 (582)
Q Consensus 428 ~~~~---~~~~~~~y~aPE~~~~-~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 500 (582)
.... ...++..|+|||.+.+ ..++.++|||||||++|||++|+.||.... ...+....+..........+
T Consensus 182 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~---~~~~~l~~~~~~~~~~~~~~~~~ 258 (330)
T 3nsz_A 182 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH---DNYDQLVRIAKVLGTEDLYDYID 258 (330)
T ss_dssp CTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCS---SHHHHHHHHHHHHCHHHHHHHHH
T ss_pred CCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCC---chHHHHHHHHHhcCCchhhhHHH
Confidence 4432 3346788999999877 678999999999999999999999995422 11111111111111000000
Q ss_pred ----ccchhhh---------------hhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 501 ----IFDSEIS---------------VQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 501 ----~~d~~~~---------------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
..++... ..........++.+++.+||+.||++|||++|+++|.+.-.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~ 325 (330)
T 3nsz_A 259 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT 325 (330)
T ss_dssp HTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTT
T ss_pred HhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhh
Confidence 0000000 00000012346889999999999999999999999877543
No 190
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.8e-39 Score=336.88 Aligned_cols=246 Identities=20% Similarity=0.336 Sum_probs=196.1
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCCc--------chHHHHHHHHHHHhcC-CCCCccccceEEEeCCeeEEE
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKP--------LITEEFRKQLLVIADQ-KHPNLLPLLAYYFSNDEKLLV 342 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv 342 (582)
.+.||+|+||.||+|... +++.||||+++.... ...+.+.+|+.++.++ +||||+++++++......++|
T Consensus 99 ~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 178 (365)
T 2y7j_A 99 KDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLV 178 (365)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEE
T ss_pred ceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEE
Confidence 368999999999999985 688999999864321 1245678999999998 899999999999999999999
Q ss_pred EEeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecc
Q 047954 343 YKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYG 422 (582)
Q Consensus 343 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG 422 (582)
|||+++++|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 179 ~e~~~g~~L~~~l~~~------~~l~~~~~~~i~~qi~~~L~~LH~~g-------i~H~Dlkp~NIl~~~~~~ikl~DfG 245 (365)
T 2y7j_A 179 FDLMRKGELFDYLTEK------VALSEKETRSIMRSLLEAVSFLHANN-------IVHRDLKPENILLDDNMQIRLSDFG 245 (365)
T ss_dssp ECCCTTCBHHHHHHHH------SSCCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCSGGGEEECTTCCEEECCCT
T ss_pred EEeCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhCC-------eecCCCCHHHEEECCCCCEEEEecC
Confidence 9999999999999743 24889999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCc---ccccccccccCCCCCCC------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHH
Q 047954 423 FSSLVAQP---IAAQRMISYKSPEYQSS------KKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAV 493 (582)
Q Consensus 423 ~a~~~~~~---~~~~~~~~y~aPE~~~~------~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~ 493 (582)
++..+... ....+++.|+|||++.+ ..++.++|||||||++|||+||+.||.... .......+
T Consensus 246 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~----~~~~~~~i---- 317 (365)
T 2y7j_A 246 FSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR----QILMLRMI---- 317 (365)
T ss_dssp TCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHH----
T ss_pred cccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCC----HHHHHHHH----
Confidence 99876543 23457889999998753 358899999999999999999999996421 11111111
Q ss_pred hhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhh
Q 047954 494 REEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEI 546 (582)
Q Consensus 494 ~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 546 (582)
...... ...+.. ......+.+++.+||+.||++|||+.|++++.+.
T Consensus 318 ~~~~~~-~~~~~~------~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f 363 (365)
T 2y7j_A 318 MEGQYQ-FSSPEW------DDRSSTVKDLISRLLQVDPEARLTAEQALQHPFF 363 (365)
T ss_dssp HHTCCC-CCHHHH------SSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGG
T ss_pred HhCCCC-CCCccc------ccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccc
Confidence 111110 000000 0112357889999999999999999999998764
No 191
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.7e-39 Score=350.79 Aligned_cols=246 Identities=21% Similarity=0.347 Sum_probs=193.0
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCC--cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK--PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNG 349 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 349 (582)
.+.||+|+||+||+|+.. ++..||+|++.... ....+.+.+|+.++++++|||||+++++|.+....++||||+++|
T Consensus 42 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g 121 (494)
T 3lij_A 42 VKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGG 121 (494)
T ss_dssp EEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCC
Confidence 468999999999999975 67789999986532 334567899999999999999999999999999999999999999
Q ss_pred ChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecC---CCceEEeecccccc
Q 047954 350 NLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDD---NEMVLVSDYGFSSL 426 (582)
Q Consensus 350 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~---~~~~kl~DfG~a~~ 426 (582)
+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||+++.
T Consensus 122 ~L~~~~~~~~------~~~~~~~~~i~~qi~~~l~~lH~~~-------ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 122 ELFDEIIHRM------KFNEVDAAVIIKQVLSGVTYLHKHN-------IVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp BHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred cHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------ceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 9999886432 4888999999999999999999998 999999999999976 44599999999987
Q ss_pred ccCcc---cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccc
Q 047954 427 VAQPI---AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFD 503 (582)
Q Consensus 427 ~~~~~---~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 503 (582)
..... ...+|+.|+|||++. ..++.++||||+||++|+|++|+.||.... ..++...+. ..... ...
T Consensus 189 ~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~----~~~~~~~i~---~~~~~--~~~ 258 (494)
T 3lij_A 189 FENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQT----DQEILRKVE---KGKYT--FDS 258 (494)
T ss_dssp CBTTBCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHHH---HTCCC--CCS
T ss_pred CCCCccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHH---hCCCC--CCc
Confidence 65432 345788999999876 469999999999999999999999996432 222222221 11111 001
Q ss_pred hhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhc
Q 047954 504 SEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547 (582)
Q Consensus 504 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 547 (582)
+.. ......+.+++.+||+.||++|||+.|+++|.|..
T Consensus 259 ~~~------~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~ 296 (494)
T 3lij_A 259 PEW------KNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIK 296 (494)
T ss_dssp GGG------TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHH
T ss_pred hhc------ccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccc
Confidence 100 01122577899999999999999999999997754
No 192
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1e-39 Score=338.97 Aligned_cols=241 Identities=23% Similarity=0.313 Sum_probs=184.9
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCC---cchHHHHHHHHHH-HhcCCCCCccccceEEEeCCeeEEEEEeCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK---PLITEEFRKQLLV-IADQKHPNLLPLLAYYFSNDEKLLVYKFAG 347 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~-l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 347 (582)
.+.||+|+||.||+|+.. ++..||+|+++... ....+.+..|..+ ++.++|||||++++++.+.+..++||||++
T Consensus 43 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~ 122 (373)
T 2r5t_A 43 LKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYIN 122 (373)
T ss_dssp EEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCC
Confidence 478999999999999976 46789999996432 2233456667766 567899999999999999999999999999
Q ss_pred CCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccc
Q 047954 348 NGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV 427 (582)
Q Consensus 348 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~ 427 (582)
+|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 123 gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~g-------ivHrDlkp~NIll~~~g~ikL~DFG~a~~~ 189 (373)
T 2r5t_A 123 GGELFYHLQRER------CFLEPRARFYAAEIASALGYLHSLN-------IVYRDLKPENILLDSQGHIVLTDFGLCKEN 189 (373)
T ss_dssp SCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHTT-------CCCCCCCGGGEEECTTSCEEECCCCBCGGG
T ss_pred CCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------ceecCCCHHHEEECCCCCEEEeeCcccccc
Confidence 999999997532 4788889999999999999999998 999999999999999999999999999864
Q ss_pred cCc----ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccc
Q 047954 428 AQP----IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFD 503 (582)
Q Consensus 428 ~~~----~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 503 (582)
... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||... +..++...+ ..... . +.
T Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~----~~~~~~~~i---~~~~~--~-~~ 259 (373)
T 2r5t_A 190 IEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR----NTAEMYDNI---LNKPL--Q-LK 259 (373)
T ss_dssp BCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS----BHHHHHHHH---HHSCC--C-CC
T ss_pred ccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCC----CHHHHHHHH---Hhccc--C-CC
Confidence 322 2345788999999999999999999999999999999999999642 112222211 11110 0 01
Q ss_pred hhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChH----HHHHHHh
Q 047954 504 SEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMA----EVVSELE 545 (582)
Q Consensus 504 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~----evl~~L~ 545 (582)
+. ....+.+++.+||+.||++||++. ++.+|.+
T Consensus 260 ~~---------~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~ 296 (373)
T 2r5t_A 260 PN---------ITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVF 296 (373)
T ss_dssp SS---------SCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGG
T ss_pred CC---------CCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCcc
Confidence 11 112577899999999999999984 6666544
No 193
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4e-40 Score=340.45 Aligned_cols=248 Identities=23% Similarity=0.317 Sum_probs=196.0
Q ss_pred cccccccCceEEEEEEE----cCCceEEEEEecCCC----cchHHHHHHHHHHHhcC-CCCCccccceEEEeCCeeEEEE
Q 047954 273 AEGLGKGIFGNSYKALL----EGRAPVVVKRLRDLK----PLITEEFRKQLLVIADQ-KHPNLLPLLAYYFSNDEKLLVY 343 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 343 (582)
.+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|+.++.++ +||||+++++++......++||
T Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 138 (355)
T 1vzo_A 59 LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLIL 138 (355)
T ss_dssp EEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEE
T ss_pred EEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEe
Confidence 57899999999999997 468899999986432 22345677899999999 6999999999999999999999
Q ss_pred EeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccc
Q 047954 344 KFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGF 423 (582)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~ 423 (582)
||+++|+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 139 e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~-------ivH~Dlkp~NIll~~~~~~kl~DfG~ 205 (355)
T 1vzo_A 139 DYINGGELFTHLSQRE------RFTEHEVQIYVGEIVLALEHLHKLG-------IIYRDIKLENILLDSNGHVVLTDFGL 205 (355)
T ss_dssp CCCCSCBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT-------CCCCCCCGGGEEECTTSCEEESCSSE
T ss_pred ecCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------cccCCCCHHHEEECCCCcEEEeeCCC
Confidence 9999999999997532 4888999999999999999999998 99999999999999999999999999
Q ss_pred cccccCc-----ccccccccccCCCCCCC--CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhc
Q 047954 424 SSLVAQP-----IAAQRMISYKSPEYQSS--KKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREE 496 (582)
Q Consensus 424 a~~~~~~-----~~~~~~~~y~aPE~~~~--~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 496 (582)
++..... ....+|+.|+|||++.+ ..++.++|||||||++|||+||+.||........ ............
T Consensus 206 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~---~~~~~~~~~~~~ 282 (355)
T 1vzo_A 206 SKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS---QAEISRRILKSE 282 (355)
T ss_dssp EEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC---HHHHHHHHHHCC
T ss_pred CeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch---HHHHHHHHhccC
Confidence 9765332 12347889999999875 3578999999999999999999999975432211 111111111111
Q ss_pred ccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCC-----ChHHHHHHHhhcc
Q 047954 497 WTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRP-----EMAEVVSELEIIK 548 (582)
Q Consensus 497 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L~~i~ 548 (582)
... .. .....+.+++.+||..||++|| +++|++++++...
T Consensus 283 --~~~-~~---------~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~ 327 (355)
T 1vzo_A 283 --PPY-PQ---------EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK 327 (355)
T ss_dssp --CCC-CT---------TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTT
T ss_pred --CCC-Cc---------ccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhc
Confidence 000 00 1112577899999999999999 9999999988654
No 194
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=4.6e-40 Score=328.00 Aligned_cols=255 Identities=23% Similarity=0.314 Sum_probs=197.0
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCC--cchHHHHHHHHHHHhcCCCCCccccceEEEe--CCeeEEEEEeCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK--PLITEEFRKQLLVIADQKHPNLLPLLAYYFS--NDEKLLVYKFAG 347 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~--~~~~~lv~e~~~ 347 (582)
.+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.++++++||||+++++++.. ....++||||++
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~ 90 (279)
T 2w5a_A 11 LYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCE 90 (279)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCT
T ss_pred ehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCC
Confidence 467999999999999975 67889999986432 3345678999999999999999999998865 567899999999
Q ss_pred CCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccc
Q 047954 348 NGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV 427 (582)
Q Consensus 348 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~ 427 (582)
+|+|.+++..... ....+++..++.++.|++.||+|||+.+.. ..+|+||||||+|||++.++.+||+|||+++..
T Consensus 91 ~~~L~~~l~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~--~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~ 166 (279)
T 2w5a_A 91 GGDLASVITKGTK--ERQYLDEEFVLRVMTQLTLALKECHRRSDG--GHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166 (279)
T ss_dssp TEEHHHHHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHHC--------CCCCCSGGGEEECSSSCEEECCCCHHHHC
T ss_pred CCCHHHHHHhhcc--cCCCCCHHHHHHHHHHHHHHHHHHhcccCC--CCeeEEeccchhhEEEcCCCCEEEecCchheee
Confidence 9999999975332 123488999999999999999999997611 124999999999999999999999999999776
Q ss_pred cCcc----cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccc
Q 047954 428 AQPI----AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFD 503 (582)
Q Consensus 428 ~~~~----~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 503 (582)
.... ...++..|+|||.+.+..++.++||||||+++|||+||+.||.... ..++... +.......+.
T Consensus 167 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~~~~~----i~~~~~~~~~- 237 (279)
T 2w5a_A 167 NHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS----QKELAGK----IREGKFRRIP- 237 (279)
T ss_dssp ---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHH----HHHTCCCCCC-
T ss_pred ccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccC----HHHHHHH----HhhcccccCC-
Confidence 5432 2346788999999988899999999999999999999999996431 1222222 2222111111
Q ss_pred hhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhccc
Q 047954 504 SEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKV 549 (582)
Q Consensus 504 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 549 (582)
. ....++.+++.+||+.||++|||+.|++++++....
T Consensus 238 ~---------~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~ 274 (279)
T 2w5a_A 238 Y---------RYSDELNEIITRMLNLKDYHRPSVEEILENPLILEH 274 (279)
T ss_dssp T---------TSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGG
T ss_pred c---------ccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhh
Confidence 0 111257889999999999999999999998876543
No 195
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=2.2e-39 Score=324.13 Aligned_cols=244 Identities=23% Similarity=0.369 Sum_probs=198.2
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCC---cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK---PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 348 (582)
.+.||+|+||.||+|... ++..||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 19 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 98 (284)
T 2vgo_A 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPR 98 (284)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred eheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCC
Confidence 467999999999999976 56789999985321 22346789999999999999999999999999999999999999
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccccc
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~ 428 (582)
|+|.+++.... .+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 99 ~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~-------i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 165 (284)
T 2vgo_A 99 GELYKELQKHG------RFDEQRSATFMEELADALHYCHERK-------VIHRDIKPENLLMGYKGELKIADFGWSVHAP 165 (284)
T ss_dssp EEHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHTTT-------EECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred CcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------ceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence 99999997532 4788999999999999999999998 9999999999999999999999999987654
Q ss_pred Cc--ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccchhh
Q 047954 429 QP--IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEI 506 (582)
Q Consensus 429 ~~--~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 506 (582)
.. ....++..|+|||.+.+..++.++||||||+++|||++|+.||.... .... ......... . +.+
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~----~~~~---~~~~~~~~~--~-~~~-- 233 (284)
T 2vgo_A 166 SLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS----HTET---HRRIVNVDL--K-FPP-- 233 (284)
T ss_dssp SSCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS----HHHH---HHHHHTTCC--C-CCT--
T ss_pred ccccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCC----HhHH---HHHHhcccc--C-CCC--
Confidence 32 23457789999999999899999999999999999999999996421 1111 111111110 0 000
Q ss_pred hhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 507 SVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 507 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
.....+.+++.+||+.||++|||+.|+++|.+...
T Consensus 234 -------~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~ 268 (284)
T 2vgo_A 234 -------FLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKA 268 (284)
T ss_dssp -------TSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHH
T ss_pred -------cCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHh
Confidence 01125778999999999999999999999877543
No 196
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=3.5e-39 Score=321.10 Aligned_cols=243 Identities=20% Similarity=0.314 Sum_probs=191.6
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCC---cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK---PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 348 (582)
.+.||+|+||.||+|... +++.||||.+.... ....+.+.+|+.++++++||||+++++++...+..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 95 (276)
T 2h6d_A 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95 (276)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCC
Confidence 467999999999999976 68899999985421 23456789999999999999999999999999999999999999
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccccc
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~ 428 (582)
++|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 96 ~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~-------i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~ 162 (276)
T 2h6d_A 96 GELFDYICKHG------RVEEMEARRLFQQILSAVDYCHRHM-------VVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162 (276)
T ss_dssp CBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHHC-------SSCCCCCGGGEEECTTSCEEECCCCGGGCCC
T ss_pred CcHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHCC-------CccCCCChhhEEECCCCCEEEeecccccccC
Confidence 99999997532 4788999999999999999999998 9999999999999999999999999998765
Q ss_pred Ccc---cccccccccCCCCCCCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccch
Q 047954 429 QPI---AAQRMISYKSPEYQSSKKI-SRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDS 504 (582)
Q Consensus 429 ~~~---~~~~~~~y~aPE~~~~~~~-~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 504 (582)
... ...++..|+|||.+.+..+ +.++||||||+++|||++|+.||.... ...+.. ....... . ...
T Consensus 163 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~----~~~~~~----~~~~~~~-~-~~~ 232 (276)
T 2h6d_A 163 DGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH----VPTLFK----KIRGGVF-Y-IPE 232 (276)
T ss_dssp C-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHH----HHHHCCC-C-CCT
T ss_pred CCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc----HHHHHH----HhhcCcc-c-Cch
Confidence 432 2346788999999987765 689999999999999999999996421 111211 1111110 0 000
Q ss_pred hhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhc
Q 047954 505 EISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547 (582)
Q Consensus 505 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 547 (582)
.....+.+++.+||+.||++|||+.|++++.+.-
T Consensus 233 ---------~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~ 266 (276)
T 2h6d_A 233 ---------YLNRSVATLLMHMLQVDPLKRATIKDIREHEWFK 266 (276)
T ss_dssp ---------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHH
T ss_pred ---------hcCHHHHHHHHHHccCChhhCCCHHHHHhChhhc
Confidence 0112577899999999999999999999987753
No 197
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=6.6e-40 Score=328.83 Aligned_cols=249 Identities=24% Similarity=0.376 Sum_probs=188.7
Q ss_pred cccccccCceEEEEEEEcC--Cc--eEEEEEecCC---CcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEe
Q 047954 273 AEGLGKGIFGNSYKALLEG--RA--PVVVKRLRDL---KPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKF 345 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~--~~--~vavK~~~~~---~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 345 (582)
.+.||+|+||.||+|.+.. +. .||||+++.. .....+.+.+|+.++++++||||+++++++.... .++||||
T Consensus 23 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e~ 101 (291)
T 1u46_A 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTEL 101 (291)
T ss_dssp EEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEEC
T ss_pred eeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEec
Confidence 4679999999999998642 22 5899988643 2344578899999999999999999999997765 8899999
Q ss_pred CCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccc
Q 047954 346 AGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSS 425 (582)
Q Consensus 346 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~ 425 (582)
+++|+|.+++.... ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 102 ~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~-------i~H~dikp~Nili~~~~~~kl~Dfg~~~ 169 (291)
T 1u46_A 102 APLGSLLDRLRKHQ-----GHFLLGTLSRYAVQVAEGMGYLESKR-------FIHRDLAARNLLLATRDLVKIGDFGLMR 169 (291)
T ss_dssp CTTCBHHHHHHHHG-----GGSCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred ccCCCHHHHHHhcc-----CCcCHHHHHHHHHHHHHHHHHHHhCC-------cccCCCchheEEEcCCCCEEEccccccc
Confidence 99999999997532 24888999999999999999999998 9999999999999999999999999998
Q ss_pred cccCcc-------cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHHHHHHhhcc
Q 047954 426 LVAQPI-------AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEW 497 (582)
Q Consensus 426 ~~~~~~-------~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (582)
...... ...++..|+|||.+.+..++.++||||||+++|||++ |+.||.... ...+ .........
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~----~~~~---~~~~~~~~~ 242 (291)
T 1u46_A 170 ALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN----GSQI---LHKIDKEGE 242 (291)
T ss_dssp ECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC----HHHH---HHHHHTSCC
T ss_pred cccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCC----HHHH---HHHHHccCC
Confidence 764432 2234567999999988889999999999999999999 999996431 1122 212111111
Q ss_pred cccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCC
Q 047954 498 TAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTE 551 (582)
Q Consensus 498 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 551 (582)
.... . .....++.+++.+||+.||++|||+.+++++|+.+....
T Consensus 243 ~~~~-~---------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 286 (291)
T 1u46_A 243 RLPR-P---------EDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286 (291)
T ss_dssp CCCC-C---------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred CCCC-C---------cCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence 1100 0 011235788999999999999999999999999887543
No 198
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.1e-39 Score=326.92 Aligned_cols=250 Identities=21% Similarity=0.262 Sum_probs=182.9
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCCCc-ch-HHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCC
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDLKP-LI-TEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNG 349 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~-~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 349 (582)
.+.||+|+||.||+|.. .+++.||+|+++.... .. .+.+.++...++.++||||+++++++...+..++||||++ |
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 90 (290)
T 3fme_A 12 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD-T 90 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCS-E
T ss_pred HHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhc-c
Confidence 46799999999999996 4678899999975422 22 2334455556788999999999999999999999999997 5
Q ss_pred ChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhcc-CCCCCCCcceecCCCCCCeeecCCCceEEeecccccccc
Q 047954 350 NLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK-DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428 (582)
Q Consensus 350 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~ 428 (582)
+|.+++..... ....+++..++.++.|++.||+|||++ + |+||||||+|||++.++.+||+|||+++...
T Consensus 91 ~l~~~l~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-------i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 91 SLDKFYKQVID--KGQTIPEDILGKIAVSIVKALEHLHSKLS-------VIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp EHHHHHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHHSC-------CCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred chHHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHhhcCC-------eecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 88887754211 123589999999999999999999998 7 9999999999999999999999999998765
Q ss_pred Ccc---cccccccccCCCCC----CCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccc
Q 047954 429 QPI---AAQRMISYKSPEYQ----SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEI 501 (582)
Q Consensus 429 ~~~---~~~~~~~y~aPE~~----~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (582)
... ...++..|+|||.+ .+..++.++|||||||++|||+||+.||.... .....+........ ...
T Consensus 162 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~~~-~~~ 234 (290)
T 3fme_A 162 DDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG------TPFQQLKQVVEEPS-PQL 234 (290)
T ss_dssp --------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCS------CHHHHHHHHHHSCC-CCC
T ss_pred ccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccC------chHHHHHHHhccCC-CCc
Confidence 432 23577889999995 56678999999999999999999999996421 11111222222211 111
Q ss_pred cchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 502 FDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 502 ~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
... ....++.+++.+||+.||++|||+.|+++|.+.-.
T Consensus 235 ~~~---------~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~ 272 (290)
T 3fme_A 235 PAD---------KFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTL 272 (290)
T ss_dssp CTT---------TSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred ccc---------cCCHHHHHHHHHHhhcChhhCcCHHHHHhCccccc
Confidence 111 11225788999999999999999999999887654
No 199
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.6e-39 Score=326.55 Aligned_cols=246 Identities=20% Similarity=0.327 Sum_probs=195.0
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCCh
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGNL 351 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 351 (582)
.+.||+|+||.||+|... ++..||+|.+.... ..+.+.+|+.++.+++||||+++++++...+..++||||+++|+|
T Consensus 34 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 111 (314)
T 3com_A 34 LEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSV 111 (314)
T ss_dssp EEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEH
T ss_pred heeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCH
Confidence 467999999999999976 47889999987533 346789999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccCc-
Q 047954 352 FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQP- 430 (582)
Q Consensus 352 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~~- 430 (582)
.+++.... ..+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 112 ~~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~-------i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (314)
T 3com_A 112 SDIIRLRN-----KTLTEDEIATILQSTLKGLEYLHFMR-------KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM 179 (314)
T ss_dssp HHHHHHHT-----CCCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCSGGGEEECTTCCEEECCCTTCEECBTTB
T ss_pred HHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhCC-------CcCCCcCHHHEEECCCCCEEEeecccchhhhhhc
Confidence 99986322 24889999999999999999999998 999999999999999999999999999766443
Q ss_pred ---ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccchhhh
Q 047954 431 ---IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEIS 507 (582)
Q Consensus 431 ---~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 507 (582)
....++..|+|||.+.+..++.++||||||+++|||++|+.||.... . ...... ...........+.
T Consensus 180 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~---~~~~~~-~~~~~~~~~~~~~-- 249 (314)
T 3com_A 180 AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIH----P---MRAIFM-IPTNPPPTFRKPE-- 249 (314)
T ss_dssp SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSC----H---HHHHHH-HHHSCCCCCSSGG--
T ss_pred cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCC----h---HHHHHH-HhcCCCcccCCcc--
Confidence 23346788999999998899999999999999999999999996421 1 111111 1111111111110
Q ss_pred hhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 508 VQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 508 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
.....+.+++.+||+.||++|||+.+++++.+...
T Consensus 250 ------~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~ 284 (314)
T 3com_A 250 ------LWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRS 284 (314)
T ss_dssp ------GSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHT
T ss_pred ------cCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhc
Confidence 01225788999999999999999999999877543
No 200
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.6e-39 Score=344.45 Aligned_cols=259 Identities=22% Similarity=0.300 Sum_probs=197.5
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCCcchHHHHHHHHHHHhcC------CCCCccccceEEEeCCeeEEEEEe
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKPLITEEFRKQLLVIADQ------KHPNLLPLLAYYFSNDEKLLVYKF 345 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l------~H~niv~l~~~~~~~~~~~lv~e~ 345 (582)
.+.||+|+||.||+|... +++.||||+++.. ....+.+.+|+.++..+ .|+||+++++++......++||||
T Consensus 102 ~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 180 (429)
T 3kvw_A 102 LKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFEL 180 (429)
T ss_dssp EEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECC
T ss_pred EEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEec
Confidence 467999999999999865 4788999999653 33456677888888776 677999999999999999999999
Q ss_pred CCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCc--eEEeeccc
Q 047954 346 AGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM--VLVSDYGF 423 (582)
Q Consensus 346 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~--~kl~DfG~ 423 (582)
+. ++|.+++..... ..+++..++.|+.||+.||+|||+.+ ||||||||+|||++.++. +||+|||+
T Consensus 181 ~~-~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~-------ivHrDlKp~NILl~~~~~~~vkL~DFG~ 248 (429)
T 3kvw_A 181 LS-MNLYELIKKNKF----QGFSLPLVRKFAHSILQCLDALHKNR-------IIHCDLKPENILLKQQGRSGIKVIDFGS 248 (429)
T ss_dssp CC-CBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHHHT-------EECSCCSGGGEEESSTTSCCEEECCCTT
T ss_pred cC-CCHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHCC-------eecCCCCHHHeEEccCCCcceEEeeccc
Confidence 96 699999976542 24889999999999999999999998 999999999999999887 99999999
Q ss_pred cccccCc-ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcc-----
Q 047954 424 SSLVAQP-IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEW----- 497 (582)
Q Consensus 424 a~~~~~~-~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~----- 497 (582)
++..... ....+++.|+|||++.+..++.++|||||||++|||+||+.||.... ..+....+........
T Consensus 249 a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~----~~~~l~~i~~~~~~p~~~~~~ 324 (429)
T 3kvw_A 249 SCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED----EGDQLACMIELLGMPSQKLLD 324 (429)
T ss_dssp CEETTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHHHHHHCCCCHHHHH
T ss_pred ceecCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC----HHHHHHHHHHHcCCCCHHHHH
Confidence 9766543 23457889999999999999999999999999999999999996432 2222222222111000
Q ss_pred ----cccccch---------------hh---------------hhhhchH-----HHHHHHHHHHHHcccCCCCCCCChH
Q 047954 498 ----TAEIFDS---------------EI---------------SVQRSAA-----HGMLKLLQVAIQCCNKSPEKRPEMA 538 (582)
Q Consensus 498 ----~~~~~d~---------------~~---------------~~~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPs~~ 538 (582)
....++. .. ....... .....+.+|+.+||+.||++|||+.
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~ 404 (429)
T 3kvw_A 325 ASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPG 404 (429)
T ss_dssp TBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred hhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHH
Confidence 0000000 00 0000000 0123578999999999999999999
Q ss_pred HHHHHHhhcc
Q 047954 539 EVVSELEIIK 548 (582)
Q Consensus 539 evl~~L~~i~ 548 (582)
|+++|.|...
T Consensus 405 e~L~Hpw~~~ 414 (429)
T 3kvw_A 405 QALRHPWLRR 414 (429)
T ss_dssp HHHTSTTTC-
T ss_pred HHhCChhhcc
Confidence 9999988654
No 201
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=5.5e-40 Score=333.98 Aligned_cols=250 Identities=19% Similarity=0.364 Sum_probs=190.9
Q ss_pred ccccccccCceEEEEEEEcCCceEEEEEecCCC--cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCC
Q 047954 272 PAEGLGKGIFGNSYKALLEGRAPVVVKRLRDLK--PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNG 349 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 349 (582)
..+.||+|+||.||+|...+ .||+|+++... ....+.+.+|+.++++++||||+++++++...+..++||||++++
T Consensus 37 ~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~ 114 (319)
T 2y4i_B 37 IGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGR 114 (319)
T ss_dssp CCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSE
T ss_pred EeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCC
Confidence 35789999999999998764 49999986432 223456788999999999999999999999999999999999999
Q ss_pred ChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccC
Q 047954 350 NLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ 429 (582)
Q Consensus 350 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~ 429 (582)
+|.+++.... ..+++..++.++.||+.||+|||+++ |+||||||+|||++ ++.+||+|||+++....
T Consensus 115 ~L~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~-------i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~ 181 (319)
T 2y4i_B 115 TLYSVVRDAK-----IVLDVNKTRQIAQEIVKGMGYLHAKG-------ILHKDLKSKNVFYD-NGKVVITDFGLFSISGV 181 (319)
T ss_dssp EHHHHTTSSC-----CCCCSHHHHHHHHHHHHHHHHHHHTT-------CCCCCCCSTTEEEC---CCEECCCSCCC----
T ss_pred cHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhCC-------ccccCCChhhEEEe-CCCEEEeecCCcccccc
Confidence 9999996532 24888999999999999999999998 99999999999998 67999999999876432
Q ss_pred c---------ccccccccccCCCCCCC---------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHH
Q 047954 430 P---------IAAQRMISYKSPEYQSS---------KKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLR 491 (582)
Q Consensus 430 ~---------~~~~~~~~y~aPE~~~~---------~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~ 491 (582)
. ....++..|+|||.+.. ..++.++|||||||++|||++|+.||.... ...+. .
T Consensus 182 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~----~~~~~----~ 253 (319)
T 2y4i_B 182 LQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQP----AEAII----W 253 (319)
T ss_dssp ------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCC----HHHHH----H
T ss_pred ccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCC----HHHHH----H
Confidence 1 12346788999998764 457899999999999999999999996422 11111 1
Q ss_pred HHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCCCC
Q 047954 492 AVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTEST 553 (582)
Q Consensus 492 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 553 (582)
..............+ ..++.+++.+||..||++|||+.++++.|+.+......
T Consensus 254 ~~~~~~~~~~~~~~~---------~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~ 306 (319)
T 2y4i_B 254 QMGTGMKPNLSQIGM---------GKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRR 306 (319)
T ss_dssp HHHTTCCCCCCCSSC---------CTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC------
T ss_pred HhccCCCCCCCcCCC---------CHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 111111111111111 12477899999999999999999999999999866543
No 202
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.5e-40 Score=336.53 Aligned_cols=259 Identities=21% Similarity=0.301 Sum_probs=195.1
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCCcc-----hHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKPL-----ITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFA 346 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 346 (582)
.+.||+|+||.||+|... +++.||||++...... ..+.+.+|+.++++++||||+++++++...+..++||||+
T Consensus 15 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 94 (346)
T 1ua2_A 15 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM 94 (346)
T ss_dssp EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcC
Confidence 467999999999999965 5788999998643211 1246789999999999999999999999999999999999
Q ss_pred CCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccc
Q 047954 347 GNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSL 426 (582)
Q Consensus 347 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~ 426 (582)
++ +|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 95 ~~-~l~~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~-------ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (346)
T 1ua2_A 95 ET-DLEVIIKDNS-----LVLTPSHIKAYMLMTLQGLEYLHQHW-------ILHRDLKPNNLLLDENGVLKLADFGLAKS 161 (346)
T ss_dssp SE-EHHHHHTTCC-----SSCCSSHHHHHHHHHHHHHHHHHHTT-------CCCCCCCGGGEEECTTCCEEECCCGGGST
T ss_pred CC-CHHHHHHhcC-----cCCCHHHHHHHHHHHHHHHHHHHHCC-------EECCCCCHHHEEEcCCCCEEEEeccccee
Confidence 75 8988886532 25888899999999999999999998 99999999999999999999999999987
Q ss_pred ccCcc----cccccccccCCCCCCCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhc----c
Q 047954 427 VAQPI----AAQRMISYKSPEYQSSK-KISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREE----W 497 (582)
Q Consensus 427 ~~~~~----~~~~~~~y~aPE~~~~~-~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~----~ 497 (582)
..... ...++..|+|||.+.+. .++.++|||||||++|||++|..||.... ..+....+....... |
T Consensus 162 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~----~~~~~~~i~~~~~~~~~~~~ 237 (346)
T 1ua2_A 162 FGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDS----DLDQLTRIFETLGTPTEEQW 237 (346)
T ss_dssp TTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHHHHHHCCCCTTTS
T ss_pred ccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCC----HHHHHHHHHHHcCCCChhhh
Confidence 64432 23467889999998654 58999999999999999999999986431 222222222221110 1
Q ss_pred cccccchh---------hhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 498 TAEIFDSE---------ISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 498 ~~~~~d~~---------~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
......+. ............++.+++.+||+.||++|||+.|+++|.+.-.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~ 297 (346)
T 1ua2_A 238 PDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSN 297 (346)
T ss_dssp SSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTS
T ss_pred hhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhc
Confidence 00000000 0000000111246888999999999999999999999988654
No 203
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=2.8e-39 Score=332.02 Aligned_cols=252 Identities=21% Similarity=0.281 Sum_probs=194.8
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCCC-cchHHHHHHHHHH-HhcCCCCCccccceEEEeCCeeEEEEEeCCCC
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDLK-PLITEEFRKQLLV-IADQKHPNLLPLLAYYFSNDEKLLVYKFAGNG 349 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~-l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 349 (582)
.+.||+|+||.||+|.. .+++.||||+++... ......+..|..+ ++.++||||+++++++...+..++||||+.+
T Consensus 56 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~- 134 (340)
T 3an0_A 56 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT- 134 (340)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCSE-
T ss_pred eeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhhC-
Confidence 46799999999999996 568889999997543 2334455566655 7788999999999999999999999999975
Q ss_pred ChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhcc-CCCCCCCcceecCCCCCCeeecCCCceEEeecccccccc
Q 047954 350 NLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK-DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428 (582)
Q Consensus 350 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~ 428 (582)
+|.+++..... ....+++..++.++.||+.||+|||++ + |+||||||+|||++.++.+||+|||+++...
T Consensus 135 ~L~~~l~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~~~-------ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 205 (340)
T 3an0_A 135 SLDKFYKQVID--KGQTIPEDILGKIAVSIVKALEHLHSKLS-------VIHRDVKPSNVLINALGQVKMCDFGISGYLV 205 (340)
T ss_dssp EHHHHHHHHHH--TSCCCCHHHHHHHHHHHHHHHHHHHHHTC-------CCCCSCCSTTEEECSTTCEEECCCSHHHHHS
T ss_pred cHHHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHhhcCC-------eecCCCCHHHEEECCCCCEEEeeCCCceecc
Confidence 99888764211 122588999999999999999999987 7 9999999999999999999999999998765
Q ss_pred Ccc---cccccccccCCCCCC----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccc
Q 047954 429 QPI---AAQRMISYKSPEYQS----SKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEI 501 (582)
Q Consensus 429 ~~~---~~~~~~~y~aPE~~~----~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (582)
... ...++..|+|||++. ...++.++|||||||++|||+||+.||.... .....+....... ....
T Consensus 206 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~------~~~~~~~~~~~~~-~~~~ 278 (340)
T 3an0_A 206 DSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG------TPFQQLKQVVEEP-SPQL 278 (340)
T ss_dssp CHHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCS------CHHHHHHHHHHSC-CCCC
T ss_pred cccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCcccc------chHHHHHHHhcCC-CCCC
Confidence 432 235788999999864 3478999999999999999999999996421 1111122222211 1111
Q ss_pred cchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccC
Q 047954 502 FDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVT 550 (582)
Q Consensus 502 ~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 550 (582)
... ....++.+++.+||+.||++|||+.|++++.+.....
T Consensus 279 ~~~---------~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~ 318 (340)
T 3an0_A 279 PAD---------KFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHE 318 (340)
T ss_dssp CGG---------GSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHT
T ss_pred Ccc---------cCCHHHHHHHHHHccCCcccCcCHHHHhcCcCccccc
Confidence 111 1123578899999999999999999999988765443
No 204
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.7e-39 Score=340.60 Aligned_cols=261 Identities=20% Similarity=0.298 Sum_probs=196.8
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCCCcchHHHHHHHHHHHhcCC--------CCCccccceEEE----eCCee
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDLKPLITEEFRKQLLVIADQK--------HPNLLPLLAYYF----SNDEK 339 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--------H~niv~l~~~~~----~~~~~ 339 (582)
.+.||+|+||.||+|+. .+++.||||+++.. ....+.+.+|+.++++++ |+||+++++++. .....
T Consensus 42 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~ 120 (397)
T 1wak_A 42 IRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHI 120 (397)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEE
T ss_pred EEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceE
Confidence 46799999999999985 45788999999643 344577889999999885 788999999998 45678
Q ss_pred EEEEEeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhcc-CCCCCCCcceecCCCCCCeeecCCC----
Q 047954 340 LLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK-DKSRTQSAVIHGNLKSTNILLDDNE---- 414 (582)
Q Consensus 340 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~~~~~ivH~Dlkp~NILl~~~~---- 414 (582)
++||||+ +++|.+.+..... ..+++..++.++.||+.||+|||++ + |+||||||+|||++.++
T Consensus 121 ~lv~e~~-~~~l~~~~~~~~~----~~~~~~~~~~i~~qi~~aL~~lH~~~g-------ivHrDikp~NIll~~~~~~~~ 188 (397)
T 1wak_A 121 CMVFEVL-GHHLLKWIIKSNY----QGLPLPCVKKIIQQVLQGLDYLHTKCR-------IIHTDIKPENILLSVNEQYIR 188 (397)
T ss_dssp EEEECCC-CCBHHHHHHHTTT----SCCCHHHHHHHHHHHHHHHHHHHHTTC-------EECCCCSGGGEEECCCHHHHH
T ss_pred EEEEecc-CccHHHHHHhccc----CCCCHHHHHHHHHHHHHHHHHHHHhCC-------EecCCCCHHHeeEeccchhhh
Confidence 9999999 6677777764422 2588999999999999999999998 7 99999999999999775
Q ss_pred ---------------------------------------------ceEEeeccccccccCc-ccccccccccCCCCCCCC
Q 047954 415 ---------------------------------------------MVLVSDYGFSSLVAQP-IAAQRMISYKSPEYQSSK 448 (582)
Q Consensus 415 ---------------------------------------------~~kl~DfG~a~~~~~~-~~~~~~~~y~aPE~~~~~ 448 (582)
.+||+|||+++..... ....+|..|+|||++.+.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~ 268 (397)
T 1wak_A 189 RLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGS 268 (397)
T ss_dssp HHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTS
T ss_pred hhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCC
Confidence 7999999999876543 234578899999999998
Q ss_pred CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCc--cchHHHHHHHHhh---------cccccccchh------------
Q 047954 449 KISRKSDVWSFGCLLLELLTGRISTHSAPQGING--ADLCSWVLRAVRE---------EWTAEIFDSE------------ 505 (582)
Q Consensus 449 ~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~--~~~~~~~~~~~~~---------~~~~~~~d~~------------ 505 (582)
.++.++|||||||++|||+||+.||......... .+....+...... .+..+.+...
T Consensus 269 ~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (397)
T 1wak_A 269 GYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPW 348 (397)
T ss_dssp CCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCC
T ss_pred CCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCc
Confidence 9999999999999999999999999754322111 1111111111110 0000000000
Q ss_pred ------hhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhh
Q 047954 506 ------ISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEI 546 (582)
Q Consensus 506 ------~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 546 (582)
.............+.+|+.+||+.||++|||++|+++|.+.
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~ 395 (397)
T 1wak_A 349 GLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWL 395 (397)
T ss_dssp CHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGG
T ss_pred chhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCccc
Confidence 00001123455678899999999999999999999998763
No 205
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=3.9e-39 Score=333.97 Aligned_cols=257 Identities=17% Similarity=0.261 Sum_probs=190.3
Q ss_pred cccccccCceEEEEEEEcCCceEEEEEecCCCc-----------chHHHHHHHHHHHhcCCCCCccccceEEEeC-----
Q 047954 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKP-----------LITEEFRKQLLVIADQKHPNLLPLLAYYFSN----- 336 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~----- 336 (582)
.+.||+|+||.||+|...++..||||++..... ...+.+.+|+.++++++||||+++++++...
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 106 (362)
T 3pg1_A 27 QRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAM 106 (362)
T ss_dssp EEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTC
T ss_pred eEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCc
Confidence 367999999999999988899999999854221 1237789999999999999999999999653
Q ss_pred CeeEEEEEeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCce
Q 047954 337 DEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMV 416 (582)
Q Consensus 337 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~ 416 (582)
...++||||+. |+|.+++.... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+
T Consensus 107 ~~~~lv~e~~~-~~l~~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~-------ivH~Dlkp~NIl~~~~~~~ 173 (362)
T 3pg1_A 107 HKLYLVTELMR-TDLAQVIHDQR-----IVISPQHIQYFMYHILLGLHVLHEAG-------VVHRDLHPGNILLADNNDI 173 (362)
T ss_dssp CEEEEEEECCS-EEHHHHHHCTT-----SCCCHHHHHHHHHHHHHHHHHHHHTT-------CCCCCCCGGGEEECTTCCE
T ss_pred ceEEEEEccCC-CCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHCc-------CEecCCChHHEEEcCCCCE
Confidence 35799999997 69999887442 25889999999999999999999998 9999999999999999999
Q ss_pred EEeeccccccccCc---ccccccccccCCCCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHH
Q 047954 417 LVSDYGFSSLVAQP---IAAQRMISYKSPEYQSS-KKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRA 492 (582)
Q Consensus 417 kl~DfG~a~~~~~~---~~~~~~~~y~aPE~~~~-~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~ 492 (582)
||+|||+++..... ....++..|+|||.+.+ ..++.++|||||||++|||++|+.||.... ..+....+...
T Consensus 174 kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~----~~~~~~~i~~~ 249 (362)
T 3pg1_A 174 TICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST----FYNQLNKIVEV 249 (362)
T ss_dssp EECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS----HHHHHHHHHHH
T ss_pred EEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCC----HHHHHHHHHHH
Confidence 99999999765433 22346788999998876 678999999999999999999999996432 11222222111
Q ss_pred Hhhcccc-------------------cccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 493 VREEWTA-------------------EIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 493 ~~~~~~~-------------------~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
....... ....... ..........+.+++.+||+.||++|||+.|+++|.+.-.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~ 322 (362)
T 3pg1_A 250 VGTPKIEDVVMFSSPSARDYLRNSLSNVPARAW--TAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFES 322 (362)
T ss_dssp HCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCH--HHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTT
T ss_pred cCCCChHHhhhccchhhhHHHHhhcccCChhhH--HhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhh
Confidence 1110000 0000000 0000111235788999999999999999999999987544
No 206
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=4.7e-40 Score=335.29 Aligned_cols=247 Identities=21% Similarity=0.311 Sum_probs=191.2
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCCc--------chHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEE
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKP--------LITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVY 343 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 343 (582)
.+.||+|+||.||+|... +++.||||.+..... .....+.+|+.++++++||||+++++++.... .++||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~lv~ 93 (322)
T 2ycf_A 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVL 93 (322)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-EEEEE
T ss_pred eeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-eEEEE
Confidence 467999999999999975 568899999864321 12345889999999999999999999987655 89999
Q ss_pred EeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCc---eEEee
Q 047954 344 KFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM---VLVSD 420 (582)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~---~kl~D 420 (582)
||+++|+|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++. +||+|
T Consensus 94 e~~~~~~L~~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~-------ivH~dlkp~NIl~~~~~~~~~~kl~D 160 (322)
T 2ycf_A 94 ELMEGGELFDKVVGN------KRLKEATCKLYFYQMLLAVQYLHENG-------IIHRDLKPENVLLSSQEEDCLIKITD 160 (322)
T ss_dssp ECCTTEETHHHHSTT------CCCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCSGGGEEESSSSSSCCEEECC
T ss_pred ecCCCCcHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHCC-------eeccCCCHHHEEEecCCCCCeEEEcc
Confidence 999999999998643 24888999999999999999999998 999999999999987654 99999
Q ss_pred ccccccccCcc---cccccccccCCCCC---CCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHh
Q 047954 421 YGFSSLVAQPI---AAQRMISYKSPEYQ---SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVR 494 (582)
Q Consensus 421 fG~a~~~~~~~---~~~~~~~y~aPE~~---~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~ 494 (582)
||+++...... ...++..|+|||++ ....++.++|||||||++|||++|+.||..... ...+...+..
T Consensus 161 fg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---~~~~~~~~~~--- 234 (322)
T 2ycf_A 161 FGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT---QVSLKDQITS--- 234 (322)
T ss_dssp CTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTC---SSCHHHHHHH---
T ss_pred CccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch---HHHHHHHHHh---
Confidence 99998775432 23467899999986 356789999999999999999999999965322 1222222211
Q ss_pred hcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhc
Q 047954 495 EEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547 (582)
Q Consensus 495 ~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 547 (582)
.... . .+.. ......++.+++.+||+.||++|||+.|+++|.+..
T Consensus 235 -~~~~-~-~~~~-----~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~ 279 (322)
T 2ycf_A 235 -GKYN-F-IPEV-----WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279 (322)
T ss_dssp -TCCC-C-CHHH-----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGC
T ss_pred -Cccc-c-Cchh-----hhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcC
Confidence 1110 0 0000 001123678899999999999999999999987643
No 207
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=5.2e-39 Score=340.93 Aligned_cols=188 Identities=21% Similarity=0.364 Sum_probs=159.7
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCC--CcchHHHHHHHHHHHhcCCCCCccccceEEEeC-----CeeEEEEE
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDL--KPLITEEFRKQLLVIADQKHPNLLPLLAYYFSN-----DEKLLVYK 344 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~~~lv~e 344 (582)
.+.||+|+||.||+|... +++.||||++... .....+.+.+|+.++++++||||+++++++... ...++|||
T Consensus 31 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e 110 (432)
T 3n9x_A 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLE 110 (432)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEE
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEe
Confidence 467999999999999965 5678999999753 233456789999999999999999999999876 56899999
Q ss_pred eCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccc
Q 047954 345 FAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS 424 (582)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a 424 (582)
|+. |+|.+++... ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 111 ~~~-~~L~~~~~~~------~~l~~~~~~~i~~qil~aL~~LH~~g-------ivHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 111 IAD-SDLKKLFKTP------IFLTEEHIKTILYNLLLGENFIHESG-------IIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp CCS-EEHHHHHHSS------CCCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred cCC-cCHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHCC-------CCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 986 6999999743 24889999999999999999999998 999999999999999999999999999
Q ss_pred ccccCc--------------------------ccccccccccCCCCC-CCCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 047954 425 SLVAQP--------------------------IAAQRMISYKSPEYQ-SSKKISRKSDVWSFGCLLLELLTGRISTH 474 (582)
Q Consensus 425 ~~~~~~--------------------------~~~~~~~~y~aPE~~-~~~~~~~k~DVwS~Gvvl~elltG~~P~~ 474 (582)
+..... ....+|..|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 876432 223467889999985 56679999999999999999998766654
No 208
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=3e-39 Score=349.73 Aligned_cols=248 Identities=23% Similarity=0.343 Sum_probs=196.2
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCCc-------------chHHHHHHHHHHHhcCCCCCccccceEEEeCCe
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKP-------------LITEEFRKQLLVIADQKHPNLLPLLAYYFSNDE 338 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 338 (582)
.+.||+|+||+||+|... ++..||+|++..... ...+.+.+|+.++++++|||||++++++.+...
T Consensus 41 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 120 (504)
T 3q5i_A 41 VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKY 120 (504)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred EeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence 467999999999999975 567899999864321 235678999999999999999999999999999
Q ss_pred eEEEEEeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCC---c
Q 047954 339 KLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNE---M 415 (582)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~---~ 415 (582)
.++||||+++|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++ .
T Consensus 121 ~~lv~e~~~gg~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~lH~~~-------ivH~Dlkp~Nil~~~~~~~~~ 187 (504)
T 3q5i_A 121 FYLVTEFYEGGELFEQIINRH------KFDECDAANIMKQILSGICYLHKHN-------IVHRDIKPENILLENKNSLLN 187 (504)
T ss_dssp EEEEEECCTTCBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCSGGGEEESSTTCCSS
T ss_pred EEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------eEeCCCcHHHEEEecCCCCcc
Confidence 999999999999999986532 4889999999999999999999998 99999999999998775 6
Q ss_pred eEEeeccccccccCc---ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHH
Q 047954 416 VLVSDYGFSSLVAQP---IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRA 492 (582)
Q Consensus 416 ~kl~DfG~a~~~~~~---~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~ 492 (582)
+||+|||+++..... ....+++.|+|||++. ..++.++||||+||++|+|++|+.||.... ..++...+.
T Consensus 188 ~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~----~~~~~~~i~-- 260 (504)
T 3q5i_A 188 IKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQN----DQDIIKKVE-- 260 (504)
T ss_dssp EEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHHH--
T ss_pred EEEEECCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHH--
Confidence 999999999876543 2345788999999887 468999999999999999999999996432 222222221
Q ss_pred HhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhccc
Q 047954 493 VREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKV 549 (582)
Q Consensus 493 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 549 (582)
..... ++... ......++.+++.+||..||++|||+.|+++|.|....
T Consensus 261 -~~~~~---~~~~~-----~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~ 308 (504)
T 3q5i_A 261 -KGKYY---FDFND-----WKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKY 308 (504)
T ss_dssp -HCCCC---CCHHH-----HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHT
T ss_pred -cCCCC---CCccc-----cCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhc
Confidence 11110 00000 00112357889999999999999999999999886543
No 209
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2.3e-39 Score=332.18 Aligned_cols=262 Identities=19% Similarity=0.286 Sum_probs=176.3
Q ss_pred CCCChhHhhhcccccccccCceEEEEEEEc-CCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEe----
Q 047954 261 AGFKLNDLLKAPAEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS---- 335 (582)
Q Consensus 261 ~~~~~~~l~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~---- 335 (582)
..+.+.+-.....+.||+|+||.||+|... +++.||||++... ..........+..+.||||+++++++..
T Consensus 22 ~~~~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~ 97 (336)
T 3fhr_A 22 KKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHHG 97 (336)
T ss_dssp BCSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred CCccccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCC
Confidence 344444444444567999999999999976 6889999998642 1222223334566799999999999976
Q ss_pred CCeeEEEEEeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecC---
Q 047954 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDD--- 412 (582)
Q Consensus 336 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~--- 412 (582)
....++||||+++|+|.+++..... ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.
T Consensus 98 ~~~~~lv~e~~~gg~L~~~l~~~~~----~~l~~~~~~~i~~ql~~~l~~LH~~~-------ivH~dlkp~NIll~~~~~ 166 (336)
T 3fhr_A 98 KRCLLIIMECMEGGELFSRIQERGD----QAFTEREAAEIMRDIGTAIQFLHSHN-------IAHRDVKPENLLYTSKEK 166 (336)
T ss_dssp EEEEEEEEECCTTEEHHHHHHTC-C----CCCBHHHHHHHHHHHHHHHHHHHHTT-------EECSCCSGGGEEESCSST
T ss_pred CceEEEEEeccCCCCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhCC-------eecCCCCHHHEEEEecCC
Confidence 4457999999999999999986432 25899999999999999999999998 999999999999976
Q ss_pred CCceEEeeccccccccCc--ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHH
Q 047954 413 NEMVLVSDYGFSSLVAQP--IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVL 490 (582)
Q Consensus 413 ~~~~kl~DfG~a~~~~~~--~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~ 490 (582)
++.+||+|||+++..... ....+++.|+|||++.+..++.++|||||||++|||++|+.||...... .......
T Consensus 167 ~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~~ 242 (336)
T 3fhr_A 167 DAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQ----AISPGMK 242 (336)
T ss_dssp TCCEEECCCTTCEEC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------
T ss_pred CceEEEeccccceeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccch----hhhhhHH
Confidence 455999999999766543 2334678899999998888999999999999999999999999653321 1110011
Q ss_pred HHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 491 RAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 491 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
........ ....+. ......++.+++.+||+.||++|||+.|+++|.+...
T Consensus 243 ~~~~~~~~-~~~~~~------~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 293 (336)
T 3fhr_A 243 RRIRLGQY-GFPNPE------WSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQ 293 (336)
T ss_dssp ---------CCCTTT------STTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred Hhhhcccc-ccCchh------hccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccc
Confidence 11000000 000000 0011235788999999999999999999999988654
No 210
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=338.43 Aligned_cols=243 Identities=17% Similarity=0.189 Sum_probs=192.4
Q ss_pred cccccccCceEEEEEE------EcCCceEEEEEecCCCcchHHHHHHHHHHHhcCC---CCCccccceEEEeCCeeEEEE
Q 047954 273 AEGLGKGIFGNSYKAL------LEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQK---HPNLLPLLAYYFSNDEKLLVY 343 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---H~niv~l~~~~~~~~~~~lv~ 343 (582)
.+.||+|+||.||+|. ...++.||||+++.. ...++..|+.++.+++ |+||+++++++...+..++||
T Consensus 70 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~ 146 (365)
T 3e7e_A 70 HHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVG 146 (365)
T ss_dssp EEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEE
T ss_pred EEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEE
Confidence 4679999999999994 556788999999653 3566788888888876 999999999999999999999
Q ss_pred EeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecC-----------
Q 047954 344 KFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDD----------- 412 (582)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~----------- 412 (582)
||+++|+|.+++...... ....+++..++.|+.||+.||+|||+.+ ||||||||+|||++.
T Consensus 147 e~~~~g~L~~~l~~~~~~-~~~~l~~~~~~~i~~qi~~~L~~lH~~~-------ivHrDiKp~NIll~~~~~~~~~~~~~ 218 (365)
T 3e7e_A 147 ELYSYGTLLNAINLYKNT-PEKVMPQGLVISFAMRMLYMIEQVHDCE-------IIHGDIKPDNFILGNGFLEQDDEDDL 218 (365)
T ss_dssp CCCCSCBHHHHHHHHHTS-TTCSCCHHHHHHHHHHHHHHHHHHHTTT-------EECCCCSGGGEEECGGGTCC------
T ss_pred eccCCCcHHHHHHHhhcc-cccCCCHHHHHHHHHHHHHHHHHHhhCC-------eecCCCCHHHEEecccccCccccccc
Confidence 999999999999753221 1235899999999999999999999998 999999999999998
Q ss_pred CCceEEeeccccccccC------cccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchH
Q 047954 413 NEMVLVSDYGFSSLVAQ------PIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLC 486 (582)
Q Consensus 413 ~~~~kl~DfG~a~~~~~------~~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~ 486 (582)
++.+||+|||+|+.+.. .....+|..|+|||++.+..++.++|||||||++|||+||+.||...... ..
T Consensus 219 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~--~~--- 293 (365)
T 3e7e_A 219 SAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG--EC--- 293 (365)
T ss_dssp CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT--EE---
T ss_pred cCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC--ce---
Confidence 89999999999975431 12334788999999999999999999999999999999999998532211 00
Q ss_pred HHHHHHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCC-CChHHHHHHHhhccc
Q 047954 487 SWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKR-PEMAEVVSELEIIKV 549 (582)
Q Consensus 487 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~R-Ps~~evl~~L~~i~~ 549 (582)
.....+. .. .. ...+.+++..|++.+|.+| |+++++.+.|+.+..
T Consensus 294 ----------~~~~~~~-~~----~~---~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~ 339 (365)
T 3e7e_A 294 ----------KPEGLFR-RL----PH---LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQ 339 (365)
T ss_dssp ----------EECSCCT-TC----SS---HHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHH
T ss_pred ----------eechhcc-cc----Cc---HHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHH
Confidence 0001110 00 01 1245577889999999999 678888888877654
No 211
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=6e-39 Score=331.17 Aligned_cols=258 Identities=16% Similarity=0.282 Sum_probs=196.0
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCCC--cchHHHHHHHHHHHhcCCCCCccccceEEEeC--------CeeEE
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDLK--PLITEEFRKQLLVIADQKHPNLLPLLAYYFSN--------DEKLL 341 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--------~~~~l 341 (582)
.+.||+|+||.||+|+. .+++.||||++.... ......+.+|+.++++++||||+++++++... +..++
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~l 101 (351)
T 3mi9_A 22 LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYL 101 (351)
T ss_dssp EEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEE
T ss_pred EEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEE
Confidence 46799999999999997 568899999985432 23346788999999999999999999999873 46899
Q ss_pred EEEeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeec
Q 047954 342 VYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDY 421 (582)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~Df 421 (582)
||||+.+ +|.+.+..... .+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+||
T Consensus 102 v~e~~~~-~l~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~~-------ivH~Dlkp~NIl~~~~~~~kl~Df 168 (351)
T 3mi9_A 102 VFDFCEH-DLAGLLSNVLV-----KFTLSEIKRVMQMLLNGLYYIHRNK-------ILHRDMKAANVLITRDGVLKLADF 168 (351)
T ss_dssp EEECCSE-EHHHHHHCTTS-----CCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCSGGGEEECTTSCEEECCC
T ss_pred EEeccCC-CHHHHHhhccC-----CCCHHHHHHHHHHHHHHHHHHHHCC-------eeCCCCCHHHEEEcCCCCEEEccc
Confidence 9999975 88888865432 4889999999999999999999998 999999999999999999999999
Q ss_pred cccccccCc--------ccccccccccCCCCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHH
Q 047954 422 GFSSLVAQP--------IAAQRMISYKSPEYQSS-KKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRA 492 (582)
Q Consensus 422 G~a~~~~~~--------~~~~~~~~y~aPE~~~~-~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~ 492 (582)
|+++.+... ....+++.|+|||++.+ ..++.++|||||||++|||+||+.||.... .......+...
T Consensus 169 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~----~~~~~~~i~~~ 244 (351)
T 3mi9_A 169 GLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT----EQHQLALISQL 244 (351)
T ss_dssp TTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS----HHHHHHHHHHH
T ss_pred hhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCC----hHHHHHHHHHH
Confidence 999765421 12345788999998876 458999999999999999999999996432 22222222222
Q ss_pred Hhhcccccccchh----h--------hhhhchHHH------HHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 493 VREEWTAEIFDSE----I--------SVQRSAAHG------MLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 493 ~~~~~~~~~~d~~----~--------~~~~~~~~~------~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
... ...+..... . .......+. ...+.+|+.+||+.||++|||++|+++|.+...
T Consensus 245 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~ 317 (351)
T 3mi9_A 245 CGS-ITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS 317 (351)
T ss_dssp HCC-CCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGS
T ss_pred hCC-CChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCC
Confidence 111 011100000 0 000000111 235789999999999999999999999988643
No 212
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=6.4e-39 Score=323.07 Aligned_cols=259 Identities=19% Similarity=0.299 Sum_probs=195.2
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCC--cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK--PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNG 349 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 349 (582)
.+.||+|+||.||+|... +++.||||+++... ....+.+.+|+.++++++||||+++++++...+..++||||+. |
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~ 86 (299)
T 2r3i_A 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-Q 86 (299)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred hhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc-C
Confidence 367999999999999975 67889999986432 2234678899999999999999999999999999999999997 6
Q ss_pred ChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccC
Q 047954 350 NLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ 429 (582)
Q Consensus 350 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~ 429 (582)
+|.+++..... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 87 ~L~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~-------i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 155 (299)
T 2r3i_A 87 DLKKFMDASAL----TGIPLPLIKSYLFQLLQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGV 155 (299)
T ss_dssp EHHHHHHHTTT----TCCCHHHHHHHHHHHHHHHHHHHHTT-------CCCCCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred CHHHHHHhhhc----cCCCHHHHHHHHHHHHHHHHHHHHCC-------ccCCCCCHHHeEEcCCCCEEECcchhhhhccC
Confidence 99999976532 24788899999999999999999998 99999999999999999999999999876543
Q ss_pred c----ccccccccccCCCCCCCCC-CCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcc---cccc
Q 047954 430 P----IAAQRMISYKSPEYQSSKK-ISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEW---TAEI 501 (582)
Q Consensus 430 ~----~~~~~~~~y~aPE~~~~~~-~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 501 (582)
. ....++..|+|||.+.+.. ++.++|||||||++|||+||+.||.... ..+....+........ ....
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 231 (299)
T 2r3i_A 156 PVRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDS----EIDQLFRIFRTLGTPDEVVWPGV 231 (299)
T ss_dssp CSBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSS----HHHHHHHHHHHHCCCCTTTSTTG
T ss_pred CccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCcc----HHHHHHHHHHHhCCCchhhhhHh
Confidence 2 2234678899999987765 7999999999999999999999996432 1122222212111100 0000
Q ss_pred -----cchhhhh------hhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhc
Q 047954 502 -----FDSEISV------QRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547 (582)
Q Consensus 502 -----~d~~~~~------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 547 (582)
..+.+.. .........++.+++.+||+.||++|||+.|+++|.+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~hp~~~ 288 (299)
T 2r3i_A 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288 (299)
T ss_dssp GGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGT
T ss_pred hcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcChhhh
Confidence 0000000 000001123678899999999999999999999987754
No 213
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=3.9e-39 Score=328.75 Aligned_cols=259 Identities=19% Similarity=0.324 Sum_probs=194.0
Q ss_pred cccccccCceEEEEEEE--cCCceEEEEEecCCC--cchHHHHHHHHHHHhcC---CCCCccccceEEE-----eCCeeE
Q 047954 273 AEGLGKGIFGNSYKALL--EGRAPVVVKRLRDLK--PLITEEFRKQLLVIADQ---KHPNLLPLLAYYF-----SNDEKL 340 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l---~H~niv~l~~~~~-----~~~~~~ 340 (582)
.+.||+|+||.||+|.. .++..||+|+++... ......+.+|+.+++++ +||||+++++++. .....+
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~ 95 (326)
T 1blx_A 16 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT 95 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEE
T ss_pred eeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEE
Confidence 46799999999999997 467889999986322 12223466777766655 8999999999997 456789
Q ss_pred EEEEeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEee
Q 047954 341 LVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSD 420 (582)
Q Consensus 341 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~D 420 (582)
+||||+. |+|.+++..... ..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|
T Consensus 96 lv~e~~~-~~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~g-------i~H~dlkp~Nili~~~~~~kl~D 163 (326)
T 1blx_A 96 LVFEHVD-QDLTTYLDKVPE----PGVPTETIKDMMFQLLRGLDFLHSHR-------VVHRDLKPQNILVTSSGQIKLAD 163 (326)
T ss_dssp EEEECCS-CBHHHHHHHSCT----TCSCHHHHHHHHHHHHHHHHHHHHTT-------CCCCCCCGGGEEECTTCCEEECS
T ss_pred EEEecCC-CCHHHHHHhccc----CCCCHHHHHHHHHHHHHHHHHHHHCC-------ceeccCCHHHeEEcCCCCEEEec
Confidence 9999997 699999976432 24889999999999999999999998 99999999999999999999999
Q ss_pred ccccccccCcc---cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhh--
Q 047954 421 YGFSSLVAQPI---AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVRE-- 495 (582)
Q Consensus 421 fG~a~~~~~~~---~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~-- 495 (582)
||+++...... ...++..|+|||++.+..++.++|||||||++|||+||+.||.... ..+....+......
T Consensus 164 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~----~~~~~~~i~~~~~~~~ 239 (326)
T 1blx_A 164 FGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS----DVDQLGKILDVIGLPG 239 (326)
T ss_dssp CCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS----HHHHHHHHHHHHCCCC
T ss_pred CcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCC----HHHHHHHHHHHcCCCC
Confidence 99998765432 3346788999999998899999999999999999999999996432 22222222222111
Q ss_pred --cccccccchhh--------hhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhc
Q 047954 496 --EWTAEIFDSEI--------SVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547 (582)
Q Consensus 496 --~~~~~~~d~~~--------~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 547 (582)
.|......+.. ............+.+++.+||+.||++|||+.|+++|.+.-
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~ 301 (326)
T 1blx_A 240 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301 (326)
T ss_dssp GGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGT
T ss_pred cccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCcccc
Confidence 11110000000 00000011223577899999999999999999999987753
No 214
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=6.8e-39 Score=328.29 Aligned_cols=257 Identities=20% Similarity=0.321 Sum_probs=198.5
Q ss_pred cccccccCceEEEEEEE--cCCceEEEEEecCCCcchHHHHHHHHHHHhcCCCC------CccccceEEEeCCeeEEEEE
Q 047954 273 AEGLGKGIFGNSYKALL--EGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHP------NLLPLLAYYFSNDEKLLVYK 344 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~------niv~l~~~~~~~~~~~lv~e 344 (582)
.+.||+|+||.||+|.. .++..||||+++.. ....+.+.+|+.++.+++|+ +++++++++...+..++|||
T Consensus 19 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e 97 (339)
T 1z57_A 19 VDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFE 97 (339)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEE
T ss_pred EEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEc
Confidence 46799999999999986 36788999999653 33456788999999888665 49999999999999999999
Q ss_pred eCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecC------------
Q 047954 345 FAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDD------------ 412 (582)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~------------ 412 (582)
|+ +++|.+++..... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.
T Consensus 98 ~~-~~~l~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~-------ivH~Dlkp~Nil~~~~~~~~~~~~~~~ 165 (339)
T 1z57_A 98 LL-GLSTYDFIKENGF----LPFRLDHIRKMAYQICKSVNFLHSNK-------LTHTDLKPENILFVQSDYTEAYNPKIK 165 (339)
T ss_dssp CC-CCBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCCGGGEEESCCCEEEEEC----
T ss_pred CC-CCCHHHHHHhcCC----CCCcHHHHHHHHHHHHHHHHHHHHCC-------CcCCCCCHHHEEEeccccccccCCccc
Confidence 99 8899999976532 25888999999999999999999998 999999999999987
Q ss_pred -------CCceEEeeccccccccCc-ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccc
Q 047954 413 -------NEMVLVSDYGFSSLVAQP-IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGAD 484 (582)
Q Consensus 413 -------~~~~kl~DfG~a~~~~~~-~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~ 484 (582)
++.+||+|||+++..... ....++..|+|||++.+..++.++|||||||++|||++|+.||.... ..+
T Consensus 166 ~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~----~~~ 241 (339)
T 1z57_A 166 RDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHD----SKE 241 (339)
T ss_dssp CEEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSC----HHH
T ss_pred cccccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC----hHH
Confidence 668999999999876543 23457889999999999999999999999999999999999996432 222
Q ss_pred hHHHHHHHHhhcccccc------------------------------cchhhhhhhchHHHHHHHHHHHHHcccCCCCCC
Q 047954 485 LCSWVLRAVREEWTAEI------------------------------FDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKR 534 (582)
Q Consensus 485 ~~~~~~~~~~~~~~~~~------------------------------~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~R 534 (582)
....+...... ..... ..+.............++.+++.+||+.||++|
T Consensus 242 ~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 320 (339)
T 1z57_A 242 HLAMMERILGP-LPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKR 320 (339)
T ss_dssp HHHHHHHHHCS-CCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred HHHHHHHHhCC-CCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccc
Confidence 22222211110 00000 000000001112334578899999999999999
Q ss_pred CChHHHHHHHhhc
Q 047954 535 PEMAEVVSELEII 547 (582)
Q Consensus 535 Ps~~evl~~L~~i 547 (582)
||+.|+++|.+.-
T Consensus 321 pt~~ell~hp~f~ 333 (339)
T 1z57_A 321 ITLREALKHPFFD 333 (339)
T ss_dssp CCHHHHTTSGGGG
T ss_pred cCHHHHhcCHHHH
Confidence 9999999886643
No 215
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=3.6e-39 Score=334.58 Aligned_cols=257 Identities=21% Similarity=0.321 Sum_probs=180.1
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCC--CcchHHHHHHHHHHHhcCCCCCccccceEEEeC------CeeEEEE
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDL--KPLITEEFRKQLLVIADQKHPNLLPLLAYYFSN------DEKLLVY 343 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~------~~~~lv~ 343 (582)
.+.||+|+||.||+|.. .++..||||++... .....+.+.+|+.++++++||||+++++++... ...++|+
T Consensus 34 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~ 113 (367)
T 2fst_X 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 113 (367)
T ss_dssp EEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEE
T ss_pred eeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEe
Confidence 46799999999999985 46788999998653 233456788999999999999999999999754 4579999
Q ss_pred EeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccc
Q 047954 344 KFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGF 423 (582)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~ 423 (582)
||+ +++|.+++... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 114 e~~-~~~L~~~~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~g-------ivH~Dlkp~NIll~~~~~~kL~DFG~ 178 (367)
T 2fst_X 114 HLM-GADLNNIVKCQ-------KLTDDHVQFLIYQILRGLKYIHSAD-------IIHRDLKPSNLAVNEDCELKILDFGL 178 (367)
T ss_dssp ECC-CEECC-----C-------CCCHHHHHHHHHHHHHHHHHHHHTT-------CCCCCCCGGGEEECTTCCEEECC---
T ss_pred ccc-CCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCC-------eeeCCCCHhhEEECCCCCEEEeeccc
Confidence 999 78999888642 4889999999999999999999998 99999999999999999999999999
Q ss_pred cccccCc-ccccccccccCCCCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhc---cc
Q 047954 424 SSLVAQP-IAAQRMISYKSPEYQSS-KKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREE---WT 498 (582)
Q Consensus 424 a~~~~~~-~~~~~~~~y~aPE~~~~-~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~---~~ 498 (582)
++..... ....+|..|+|||++.+ ..++.++|||||||++|||++|+.||.... ..+....+....... ..
T Consensus 179 a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~----~~~~l~~i~~~~g~p~~~~~ 254 (367)
T 2fst_X 179 ARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD----HIDQLKLILRLVGTPGAELL 254 (367)
T ss_dssp ------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSS----HHHHHHHHHHHHCSCCHHHH
T ss_pred cccccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHHHhCCCCHHHH
Confidence 9876543 23457888999999876 678999999999999999999999996432 222222222221110 00
Q ss_pred ccccchhh-------------hhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 499 AEIFDSEI-------------SVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 499 ~~~~d~~~-------------~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
..+..... ............+.+|+.+||..||++|||+.|+++|.+.-.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~ 317 (367)
T 2fst_X 255 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317 (367)
T ss_dssp TTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred HHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhh
Confidence 00000000 000000011235788999999999999999999999987554
No 216
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=6.9e-39 Score=333.30 Aligned_cols=255 Identities=17% Similarity=0.264 Sum_probs=188.3
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCC--CcchHHHHHHHHHHHhcCCCCCccccceEEEeCC------eeEEEE
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDL--KPLITEEFRKQLLVIADQKHPNLLPLLAYYFSND------EKLLVY 343 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------~~~lv~ 343 (582)
.+.||+|+||.||+|... ++..||||++... .....+.+.+|+.++++++||||+++++++.... ..++||
T Consensus 30 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~ 109 (371)
T 2xrw_A 30 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 109 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEE
T ss_pred eeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEE
Confidence 467999999999999864 5788999998643 2334567889999999999999999999998765 679999
Q ss_pred EeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccc
Q 047954 344 KFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGF 423 (582)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~ 423 (582)
||+. |+|.+.+.. .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 110 e~~~-~~l~~~~~~--------~~~~~~~~~i~~qi~~al~~lH~~~-------ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 110 ELMD-ANLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSAG-------IIHRDLKPSNIVVKSDCTLKILDFGL 173 (371)
T ss_dssp ECCS-EEHHHHHHS--------CCCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred EcCC-CCHHHHHhh--------ccCHHHHHHHHHHHHHHHHHHHHCC-------eecccCCHHHEEEcCCCCEEEEEeec
Confidence 9997 588888852 3788899999999999999999998 99999999999999999999999999
Q ss_pred cccccCc---ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhc---c
Q 047954 424 SSLVAQP---IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREE---W 497 (582)
Q Consensus 424 a~~~~~~---~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~---~ 497 (582)
++..... ....++..|+|||++.+..++.++|||||||++|||++|+.||.... ..+....+....... .
T Consensus 174 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~----~~~~~~~i~~~~~~~~~~~ 249 (371)
T 2xrw_A 174 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD----HIDQWNKVIEQLGTPCPEF 249 (371)
T ss_dssp ----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHHHC-CCCCCHHH
T ss_pred ccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHHHhCCCCHHH
Confidence 9876543 23357788999999999999999999999999999999999996432 111111111000000 0
Q ss_pred --------------ccc--------ccchh-hhh-hhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhc
Q 047954 498 --------------TAE--------IFDSE-ISV-QRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547 (582)
Q Consensus 498 --------------~~~--------~~d~~-~~~-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 547 (582)
... .+... .+. .........++.+|+.+||..||++|||++|+++|.+.-
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~ 323 (371)
T 2xrw_A 250 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 323 (371)
T ss_dssp HTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHH
T ss_pred HHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchh
Confidence 000 00000 000 000112245688999999999999999999999998864
No 217
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=321.21 Aligned_cols=246 Identities=19% Similarity=0.264 Sum_probs=192.1
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCC----cchHHHHHHHHHHHhcCCCCCccccceEEEe--CCeeEEEEEe
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK----PLITEEFRKQLLVIADQKHPNLLPLLAYYFS--NDEKLLVYKF 345 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~--~~~~~lv~e~ 345 (582)
.+.||+|+||.||+|... ++..||+|+++... ....+.+.+|+.++++++||||+++++++.. ....++||||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 89 (305)
T 2wtk_C 10 GDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEY 89 (305)
T ss_dssp CCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEEC
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehh
Confidence 467999999999999964 57889999986432 2345779999999999999999999999854 4578999999
Q ss_pred CCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccc
Q 047954 346 AGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSS 425 (582)
Q Consensus 346 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~ 425 (582)
+.++ |.+++..... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++.
T Consensus 90 ~~~~-l~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~LH~~~-------i~H~dlkp~NIl~~~~~~~kl~dfg~~~ 157 (305)
T 2wtk_C 90 CVCG-MQEMLDSVPE----KRFPVCQAHGYFCQLIDGLEYLHSQG-------IVHKDIKPGNLLLTTGGTLKISALGVAE 157 (305)
T ss_dssp CSEE-HHHHHHHSTT----CSCCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred ccCC-HHHHHHhCcc----cccCHHHHHHHHHHHHHHHHHHHHCC-------eeecCCCcccEEEcCCCcEEeecccccc
Confidence 9876 7777765432 25889999999999999999999998 9999999999999999999999999997
Q ss_pred cccCc------ccccccccccCCCCCCCCC--CCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcc
Q 047954 426 LVAQP------IAAQRMISYKSPEYQSSKK--ISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEW 497 (582)
Q Consensus 426 ~~~~~------~~~~~~~~y~aPE~~~~~~--~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (582)
..... ....++..|+|||.+.+.. ++.++||||||+++|||++|+.||.... ....... +....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-------~~~~~~~-i~~~~ 229 (305)
T 2wtk_C 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN-------IYKLFEN-IGKGS 229 (305)
T ss_dssp ECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS-------HHHHHHH-HHHCC
T ss_pred ccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch-------HHHHHHH-HhcCC
Confidence 65421 2334778999999987644 3789999999999999999999996421 1111111 11111
Q ss_pred cccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhccc
Q 047954 498 TAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKV 549 (582)
Q Consensus 498 ~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 549 (582)
. .. .. .....+.+++.+||+.||++|||+.|++++.+....
T Consensus 230 ~-~~-~~---------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~ 270 (305)
T 2wtk_C 230 Y-AI-PG---------DCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKK 270 (305)
T ss_dssp C-CC-CS---------SSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSC
T ss_pred C-CC-CC---------ccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccC
Confidence 1 00 00 111257789999999999999999999999876543
No 218
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=3.4e-39 Score=358.59 Aligned_cols=247 Identities=21% Similarity=0.398 Sum_probs=197.5
Q ss_pred ccccccccCceEEEEEEEcC----CceEEEEEecCCC-cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeC
Q 047954 272 PAEGLGKGIFGNSYKALLEG----RAPVVVKRLRDLK-PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFA 346 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 346 (582)
..+.||+|+||.||+|.+.. +..||||+++... ....+.+.+|+.++++++||||+++++++. .+..++||||+
T Consensus 394 i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E~~ 472 (656)
T 2j0j_A 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELC 472 (656)
T ss_dssp EEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred EeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEEEcC
Confidence 35789999999999998743 4568999986543 334578999999999999999999999984 56789999999
Q ss_pred CCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccc
Q 047954 347 GNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSL 426 (582)
Q Consensus 347 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~ 426 (582)
++|+|.+++.... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 473 ~~g~L~~~l~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g-------ivHrDikp~NILl~~~~~vkL~DFG~a~~ 540 (656)
T 2j0j_A 473 TLGELRSFLQVRK-----FSLDLASLILYAYQLSTALAYLESKR-------FVHRDIAARNVLVSSNDCVKLGDFGLSRY 540 (656)
T ss_dssp TTCBHHHHHHHTT-----TTCCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCSGGGEEEEETTEEEECCCCCCCS
T ss_pred CCCcHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHhCC-------ccccccchHhEEEeCCCCEEEEecCCCee
Confidence 9999999997543 24889999999999999999999998 99999999999999999999999999987
Q ss_pred ccCcc-----cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHHHHHHhhccccc
Q 047954 427 VAQPI-----AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVREEWTAE 500 (582)
Q Consensus 427 ~~~~~-----~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (582)
..... ...+++.|+|||++.+..++.++|||||||++|||++ |..||... ...++...+.. .....
T Consensus 541 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~----~~~~~~~~i~~----~~~~~ 612 (656)
T 2j0j_A 541 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV----KNNDVIGRIEN----GERLP 612 (656)
T ss_dssp CCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC----CHHHHHHHHHH----TCCCC
T ss_pred cCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCC----CHHHHHHHHHc----CCCCC
Confidence 75432 2234578999999988899999999999999999997 99999643 22222222211 11111
Q ss_pred ccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhccc
Q 047954 501 IFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKV 549 (582)
Q Consensus 501 ~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 549 (582)
. .+ .....+.+++.+||+.||++|||+.|+++.|+.+..
T Consensus 613 ~-~~---------~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 613 M-PP---------NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp C-CT---------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred C-Cc---------cccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 1 00 112357889999999999999999999999998864
No 219
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=6.6e-39 Score=332.61 Aligned_cols=258 Identities=18% Similarity=0.307 Sum_probs=196.8
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCC-cchHHHHHHHHHHHhcCCCCCccccceEEEeC-----CeeEEEEEe
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK-PLITEEFRKQLLVIADQKHPNLLPLLAYYFSN-----DEKLLVYKF 345 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~~~lv~e~ 345 (582)
.+.||+|+||.||+|... ++..||||++.... ....+.+.+|++++.+++||||+++++++... ...++||||
T Consensus 32 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~ 111 (364)
T 3qyz_A 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 111 (364)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEEC
T ss_pred EEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEcc
Confidence 467999999999999865 67789999997533 33447789999999999999999999999765 368999999
Q ss_pred CCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccc
Q 047954 346 AGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSS 425 (582)
Q Consensus 346 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~ 425 (582)
+. |+|.+++... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 112 ~~-~~L~~~l~~~-------~~~~~~~~~i~~qi~~aL~~LH~~~-------ivH~Dikp~NIl~~~~~~~kl~Dfg~a~ 176 (364)
T 3qyz_A 112 ME-TDLYKLLKTQ-------HLSNDHICYFLYQILRGLKYIHSAN-------VLHRDLKPSNLLLNTTCDLKICDFGLAR 176 (364)
T ss_dssp CS-EEHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred cC-cCHHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHCC-------eecCCCChHhEEECCCCCEEEEeCcceE
Confidence 97 5999998643 3888999999999999999999998 9999999999999999999999999998
Q ss_pred cccCcc-------cccccccccCCCCCC-CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcc
Q 047954 426 LVAQPI-------AAQRMISYKSPEYQS-SKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEW 497 (582)
Q Consensus 426 ~~~~~~-------~~~~~~~y~aPE~~~-~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (582)
...... ...+++.|+|||++. ...++.++|||||||++|||++|+.||.... ..+....+........
T Consensus 177 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~----~~~~~~~i~~~~~~~~ 252 (364)
T 3qyz_A 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH----YLDQLNHILGILGSPS 252 (364)
T ss_dssp ECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSS----GGGHHHHHHHHHCSCC
T ss_pred ecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCC----hHHHHHHHHHHhCCCC
Confidence 765332 235688899999765 4558999999999999999999999996432 2233333222211100
Q ss_pred cc---cccchh-------------hhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhccc
Q 047954 498 TA---EIFDSE-------------ISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKV 549 (582)
Q Consensus 498 ~~---~~~d~~-------------~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 549 (582)
.. .+.+.. ............++.+++.+||+.||++|||+.|+++|.+.-..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 320 (364)
T 3qyz_A 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 320 (364)
T ss_dssp HHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTT
T ss_pred HHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhc
Confidence 00 000000 00000001112357899999999999999999999999886543
No 220
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.8e-39 Score=328.57 Aligned_cols=257 Identities=19% Similarity=0.308 Sum_probs=188.5
Q ss_pred cccccccCceEEEEEEEcC-CceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEE--------------eCC
Q 047954 273 AEGLGKGIFGNSYKALLEG-RAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYF--------------SND 337 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~--------------~~~ 337 (582)
.+.||+|+||.||+|.... ++.||+|++........+.+.+|+.++++++||||+++++++. ...
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~ 95 (320)
T 2i6l_A 16 LKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELN 95 (320)
T ss_dssp EEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCS
T ss_pred EEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccC
Confidence 4679999999999999764 7889999997666666778999999999999999999999874 345
Q ss_pred eeEEEEEeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeec-CCCce
Q 047954 338 EKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLD-DNEMV 416 (582)
Q Consensus 338 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~-~~~~~ 416 (582)
..++||||+. |+|.+++... .+++..++.++.||+.||+|||+.+ |+||||||+|||++ +++.+
T Consensus 96 ~~~lv~e~~~-~~L~~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~~-------i~H~dlkp~Nil~~~~~~~~ 160 (320)
T 2i6l_A 96 SVYIVQEYME-TDLANVLEQG-------PLLEEHARLFMYQLLRGLKYIHSAN-------VLHRDLKPANLFINTEDLVL 160 (320)
T ss_dssp EEEEEEECCS-EEHHHHHTTC-------CCCHHHHHHHHHHHHHHHHHHHHTT-------CBCCCCSGGGEEEETTTTEE
T ss_pred ceeEEeeccC-CCHHHHhhcC-------CccHHHHHHHHHHHHHHHHHHHhCC-------EecCCCCHHHEEEcCCCCeE
Confidence 7899999997 6999998532 4788899999999999999999998 99999999999997 56799
Q ss_pred EEeeccccccccCc-------ccccccccccCCCCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHH
Q 047954 417 LVSDYGFSSLVAQP-------IAAQRMISYKSPEYQSS-KKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSW 488 (582)
Q Consensus 417 kl~DfG~a~~~~~~-------~~~~~~~~y~aPE~~~~-~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~ 488 (582)
||+|||+++..... ....++..|+|||.+.+ ..++.++|||||||++|||+||+.||.... ..+....
T Consensus 161 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~----~~~~~~~ 236 (320)
T 2i6l_A 161 KIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH----ELEQMQL 236 (320)
T ss_dssp EECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHH
T ss_pred EEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCC----HHHHHHH
Confidence 99999999876432 12234678999998765 678999999999999999999999996432 1111111
Q ss_pred HHHHHhhc----------ccccccchhhh-----hhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 489 VLRAVREE----------WTAEIFDSEIS-----VQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 489 ~~~~~~~~----------~~~~~~d~~~~-----~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
+....... ........... ..........++.+++.+||+.||++|||++|+++|.+.-.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 311 (320)
T 2i6l_A 237 ILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSI 311 (320)
T ss_dssp HHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHT
T ss_pred HHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCccccc
Confidence 11110000 00000000000 00000112346889999999999999999999999877543
No 221
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.9e-39 Score=327.53 Aligned_cols=247 Identities=21% Similarity=0.323 Sum_probs=191.1
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCCCcchHHHHHHHHHHHhcC-CCCCccccceEEEe------CCeeEEEEE
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDLKPLITEEFRKQLLVIADQ-KHPNLLPLLAYYFS------NDEKLLVYK 344 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~------~~~~~lv~e 344 (582)
.+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|+.++.++ +||||+++++++.. .+..++|||
T Consensus 29 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e 107 (326)
T 2x7f_A 29 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVME 107 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEE
T ss_pred EEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEE
Confidence 46799999999999997 467889999986433 3456789999999998 89999999999987 457899999
Q ss_pred eCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccc
Q 047954 345 FAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS 424 (582)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a 424 (582)
|+++|+|.+++..... ..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 108 ~~~~~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~-------ivH~dlkp~NIl~~~~~~~kl~Dfg~~ 176 (326)
T 2x7f_A 108 FCGAGSVTDLIKNTKG----NTLKEEWIAYICREILRGLSHLHQHK-------VIHRDIKGQNVLLTENAEVKLVDFGVS 176 (326)
T ss_dssp CCTTEEHHHHHHHSGG----GCCCHHHHHHHHHHHHHHHHHHHHTT-------CCCCCCSGGGEEECTTCCEEECCCTTT
T ss_pred cCCCCcHHHHHHhccc----CCCCHHHHHHHHHHHHHHHHHHHHCC-------ccccCCcHHHEEEcCCCCEEEeeCcCc
Confidence 9999999999976432 25888899999999999999999998 999999999999999999999999999
Q ss_pred ccccCc----ccccccccccCCCCCC-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhh
Q 047954 425 SLVAQP----IAAQRMISYKSPEYQS-----SKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVRE 495 (582)
Q Consensus 425 ~~~~~~----~~~~~~~~y~aPE~~~-----~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~ 495 (582)
...... ....++..|+|||.+. +..++.++|||||||++|||+||+.||.... .. ........
T Consensus 177 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~---~~~~~~~~- 248 (326)
T 2x7f_A 177 AQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH----PM---RALFLIPR- 248 (326)
T ss_dssp C-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSC----HH---HHHHHHHH-
T ss_pred eecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc----HH---HHHHHhhc-
Confidence 876432 2334778899999886 5678999999999999999999999996421 11 11111111
Q ss_pred cccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 496 EWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 496 ~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
.......... ....+.+++.+||..||++|||+.+++++.+...
T Consensus 249 ~~~~~~~~~~---------~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~ 292 (326)
T 2x7f_A 249 NPAPRLKSKK---------WSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRD 292 (326)
T ss_dssp SCCCCCSCSC---------SCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHC
T ss_pred CccccCCccc---------cCHHHHHHHHHHhccChhhCCCHHHHhhChHHhh
Confidence 1111111111 1125788999999999999999999999876543
No 222
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=3.6e-39 Score=332.24 Aligned_cols=256 Identities=18% Similarity=0.244 Sum_probs=197.7
Q ss_pred cccccccCceEEEEEEEcCCceEEEEEecCCCcc-----------------hHHHHHHHHHHHhcCCCCCccccceEEEe
Q 047954 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPL-----------------ITEEFRKQLLVIADQKHPNLLPLLAYYFS 335 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------------~~~~~~~e~~~l~~l~H~niv~l~~~~~~ 335 (582)
.+.||+|+||.||+|.. ++..||||++...... ..+.+.+|+.++++++||||+++++++.+
T Consensus 36 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 114 (348)
T 2pml_X 36 IRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITN 114 (348)
T ss_dssp EEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEES
T ss_pred EEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEee
Confidence 46799999999999999 8899999998632111 12789999999999999999999999999
Q ss_pred CCeeEEEEEeCCCCChHHH------HhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhc-cCCCCCCCcceecCCCCCCe
Q 047954 336 NDEKLLVYKFAGNGNLFNR------IHGGKSSKNRIPFRCRSRLLVARGVARALEYLHH-KDKSRTQSAVIHGNLKSTNI 408 (582)
Q Consensus 336 ~~~~~lv~e~~~~gsL~~~------l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~~~~~ivH~Dlkp~NI 408 (582)
.+..++||||+++|+|.++ +.... ...+++..++.++.||+.||+|||+ .+ |+||||||+||
T Consensus 115 ~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~~-------i~H~dl~p~Ni 183 (348)
T 2pml_X 115 YDEVYIIYEYMENDSILKFDEYFFVLDKNY----TCFIPIQVIKCIIKSVLNSFSYIHNEKN-------ICHRDVKPSNI 183 (348)
T ss_dssp SSEEEEEEECCTTCBSSEESSSEESSCSSS----CCCCCHHHHHHHHHHHHHHHHHHHHTSC-------EECCCCCGGGE
T ss_pred CCeEEEEEeccCCCcHHHHHHHhhhhhhcc----ccCCCHHHHHHHHHHHHHHHHHHhccCC-------EeecCCChHhE
Confidence 9999999999999999998 43321 2368999999999999999999999 87 99999999999
Q ss_pred eecCCCceEEeeccccccccCc--ccccccccccCCCCCCCC-CCCc-chhHHHHHHHHHHHHhCCCCCCCCCCCCCccc
Q 047954 409 LLDDNEMVLVSDYGFSSLVAQP--IAAQRMISYKSPEYQSSK-KISR-KSDVWSFGCLLLELLTGRISTHSAPQGINGAD 484 (582)
Q Consensus 409 Ll~~~~~~kl~DfG~a~~~~~~--~~~~~~~~y~aPE~~~~~-~~~~-k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~ 484 (582)
|++.++.+||+|||++...... ....++..|+|||.+.+. .++. ++|||||||++|||++|+.||..... ..+
T Consensus 184 l~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---~~~ 260 (348)
T 2pml_X 184 LMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKIS---LVE 260 (348)
T ss_dssp EECTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSC---SHH
T ss_pred EEcCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCc---HHH
Confidence 9999999999999999876443 234577889999999877 6666 99999999999999999999974321 112
Q ss_pred hHHHHHHHHhhcccccc------cchhhh--hhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhc
Q 047954 485 LCSWVLRAVREEWTAEI------FDSEIS--VQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547 (582)
Q Consensus 485 ~~~~~~~~~~~~~~~~~------~d~~~~--~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 547 (582)
+...+ ........ ..+... ..........++.+++.+||+.||++|||+.|+++|.+..
T Consensus 261 ~~~~i----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~ 327 (348)
T 2pml_X 261 LFNNI----RTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLA 327 (348)
T ss_dssp HHHHH----TSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGT
T ss_pred HHHHH----hccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCcccc
Confidence 22211 11111000 000000 0000011223678899999999999999999999987754
No 223
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.6e-38 Score=320.01 Aligned_cols=247 Identities=21% Similarity=0.288 Sum_probs=196.5
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCC---------cchHHHHHHHHHHHhcCC-CCCccccceEEEeCCeeEE
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK---------PLITEEFRKQLLVIADQK-HPNLLPLLAYYFSNDEKLL 341 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~l 341 (582)
.+.||+|+||.||+|... +++.||||.+.... ....+.+.+|+.++.++. ||||+++++++......++
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~l 101 (298)
T 1phk_A 22 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFL 101 (298)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred eeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEE
Confidence 467999999999999975 57889999986432 122456889999999995 9999999999999999999
Q ss_pred EEEeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeec
Q 047954 342 VYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDY 421 (582)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~Df 421 (582)
||||+++++|.+++.... .+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+||
T Consensus 102 v~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~-------i~H~dl~p~Nil~~~~~~~kl~df 168 (298)
T 1phk_A 102 VFDLMKKGELFDYLTEKV------TLSEKETRKIMRALLEVICALHKLN-------IVHRDLKPENILLDDDMNIKLTDF 168 (298)
T ss_dssp EEECCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCSGGGEEECTTCCEEECCC
T ss_pred EEeccCCCcHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHCC-------cccCCCCcceEEEcCCCcEEEecc
Confidence 999999999999997532 4889999999999999999999998 999999999999999999999999
Q ss_pred cccccccCcc---cccccccccCCCCCC------CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHH
Q 047954 422 GFSSLVAQPI---AAQRMISYKSPEYQS------SKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRA 492 (582)
Q Consensus 422 G~a~~~~~~~---~~~~~~~y~aPE~~~------~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~ 492 (582)
|++....... ...++..|+|||++. ...++.++||||||+++|||++|+.||.... ...... ..
T Consensus 169 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~----~~~~~~---~~ 241 (298)
T 1phk_A 169 GFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK----QMLMLR---MI 241 (298)
T ss_dssp TTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHH---HH
T ss_pred cchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc----HHHHHH---HH
Confidence 9997765432 334678899999874 4568899999999999999999999996421 111111 11
Q ss_pred HhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhc
Q 047954 493 VREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547 (582)
Q Consensus 493 ~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 547 (582)
...... ...+. .......+.+++.+||+.||++|||+.|++++.+..
T Consensus 242 ~~~~~~--~~~~~------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~ 288 (298)
T 1phk_A 242 MSGNYQ--FGSPE------WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288 (298)
T ss_dssp HHTCCC--CCTTT------GGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred hcCCcc--cCccc------ccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhh
Confidence 111111 00000 011123578899999999999999999999987754
No 224
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.2e-38 Score=323.57 Aligned_cols=246 Identities=20% Similarity=0.332 Sum_probs=192.6
Q ss_pred cccccccCceEEEEEEEcCCceEEEEEecCC--CcchHHHHHHHHHHHhcCC--CCCccccceEEEeCCeeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDL--KPLITEEFRKQLLVIADQK--HPNLLPLLAYYFSNDEKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~--H~niv~l~~~~~~~~~~~lv~e~~~~ 348 (582)
.+.||+|+||.||+|...+++.||||++... .....+.+.+|+.++.+++ ||||+++++++...+..++||| +.+
T Consensus 33 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~ 111 (313)
T 3cek_A 33 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 111 (313)
T ss_dssp EEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CCS
T ss_pred EEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cCC
Confidence 4679999999999999888999999998643 2334578899999999997 5999999999999999999999 568
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccccc
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~ 428 (582)
++|.+++.... .+++..++.++.||+.||.|||+.+ |+||||||+|||+++ +.+||+|||+++...
T Consensus 112 ~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~LH~~~-------ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~ 177 (313)
T 3cek_A 112 IDLNSWLKKKK------SIDPWERKSYWKNMLEAVHTIHQHG-------IVHSDLKPANFLIVD-GMLKLIDFGIANQMQ 177 (313)
T ss_dssp EEHHHHHHHCS------SCCHHHHHHHHHHHHHHHHHHHHTT-------CCCCCCCGGGEEEET-TEEEECCCSSSCC--
T ss_pred CcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------ceecCCCcccEEEEC-CeEEEeecccccccc
Confidence 89999997542 4788899999999999999999998 999999999999974 889999999998764
Q ss_pred Ccc------cccccccccCCCCCCC-----------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHH
Q 047954 429 QPI------AAQRMISYKSPEYQSS-----------KKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLR 491 (582)
Q Consensus 429 ~~~------~~~~~~~y~aPE~~~~-----------~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~ 491 (582)
... ...++..|+|||.+.+ ..++.++|||||||++|||++|+.||..... .......
T Consensus 178 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~------~~~~~~~ 251 (313)
T 3cek_A 178 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN------QISKLHA 251 (313)
T ss_dssp ------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS------HHHHHHH
T ss_pred CccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH------HHHHHHH
Confidence 432 2346889999998865 4788999999999999999999999964321 1112222
Q ss_pred HHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhccc
Q 047954 492 AVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKV 549 (582)
Q Consensus 492 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 549 (582)
...........+ . ...++.+++.+||+.||++|||+.|++++.+....
T Consensus 252 ~~~~~~~~~~~~-------~---~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~ 299 (313)
T 3cek_A 252 IIDPNHEIEFPD-------I---PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ 299 (313)
T ss_dssp HHCTTSCCCCCC-------C---SCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC
T ss_pred HHhcccccCCcc-------c---chHHHHHHHHHHccCCcccCcCHHHHhcCccccCC
Confidence 222111111100 0 01257789999999999999999999999876543
No 225
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=8.3e-40 Score=329.94 Aligned_cols=259 Identities=24% Similarity=0.367 Sum_probs=180.8
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCCC-cchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCCC
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDLK-PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNGN 350 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 350 (582)
.+.||+|+||.||+|.. .++..||||++.... ....+.+.+|+.++.+++||||+++++++...+..++||||+++|+
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 99 (303)
T 2vwi_A 20 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGS 99 (303)
T ss_dssp EEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTCB
T ss_pred hheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCCc
Confidence 46799999999999985 467889999986432 2345678899999999999999999999999999999999999999
Q ss_pred hHHHHhcCCCC--CCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccccc
Q 047954 351 LFNRIHGGKSS--KNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428 (582)
Q Consensus 351 L~~~l~~~~~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~ 428 (582)
|.+++...... .....+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 100 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-------i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 172 (303)
T 2vwi_A 100 VLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG-------QIHRDVKAGNILLGEDGSVQIADFGVSAFLA 172 (303)
T ss_dssp HHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT-------CCCCCCSGGGEEECTTCCEEECCCHHHHHCC
T ss_pred hHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-------CCCCCCChhhEEEcCCCCEEEEeccchheec
Confidence 99998642110 11235889999999999999999999998 9999999999999999999999999987654
Q ss_pred Cc---------ccccccccccCCCCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhccc
Q 047954 429 QP---------IAAQRMISYKSPEYQSS-KKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWT 498 (582)
Q Consensus 429 ~~---------~~~~~~~~y~aPE~~~~-~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (582)
.. ....++..|+|||.+.+ ..++.++||||||+++|||+||+.||..... .... ....... .
T Consensus 173 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~~---~~~~~~~-~ 244 (303)
T 2vwi_A 173 TGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPP----MKVL---MLTLQND-P 244 (303)
T ss_dssp ---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCG----GGHH---HHHHTSS-C
T ss_pred cCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCch----hhHH---HHHhccC-C
Confidence 32 12346788999998865 5689999999999999999999999965321 1111 1111111 1
Q ss_pred ccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhc
Q 047954 499 AEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547 (582)
Q Consensus 499 ~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 547 (582)
..... .............++.+++.+||+.||++|||+.|++++.+..
T Consensus 245 ~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~ 292 (303)
T 2vwi_A 245 PSLET-GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 292 (303)
T ss_dssp CCTTC------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC-
T ss_pred Ccccc-ccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhh
Confidence 10000 0000000001123578899999999999999999999987644
No 226
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=8.6e-39 Score=335.14 Aligned_cols=257 Identities=20% Similarity=0.331 Sum_probs=188.6
Q ss_pred ccccccccCceEEEEEEEcCCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCCe------eEEEEEe
Q 047954 272 PAEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDE------KLLVYKF 345 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~------~~lv~e~ 345 (582)
..+.||+|+||.||+|+...+..||+|++...... ..+|+.++++++||||+++++++..... .++||||
T Consensus 44 ~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~ 119 (394)
T 4e7w_A 44 NCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEY 119 (394)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEEC
T ss_pred EeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeec
Confidence 35689999999999999988777999988643321 2369999999999999999999976543 7899999
Q ss_pred CCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeec-CCCceEEeecccc
Q 047954 346 AGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLD-DNEMVLVSDYGFS 424 (582)
Q Consensus 346 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~-~~~~~kl~DfG~a 424 (582)
++++ +.+.+..... ....+++..+..++.||+.||+|||+.+ |+||||||+|||++ .++.+||+|||++
T Consensus 120 ~~~~-l~~~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~-------ivHrDlkp~Nill~~~~~~~kL~DFG~a 189 (394)
T 4e7w_A 120 VPET-VYRASRHYAK--LKQTMPMLLIKLYMYQLLRSLAYIHSIG-------ICHRDIKPQNLLLDPPSGVLKLIDFGSA 189 (394)
T ss_dssp CSEE-HHHHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred cCcc-HHHHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-------ccCCCCCHHHEEEcCCCCcEEEeeCCCc
Confidence 9874 4433321111 1125888999999999999999999998 99999999999999 7999999999999
Q ss_pred ccccCc---ccccccccccCCCCCCCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhh-----
Q 047954 425 SLVAQP---IAAQRMISYKSPEYQSSK-KISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVRE----- 495 (582)
Q Consensus 425 ~~~~~~---~~~~~~~~y~aPE~~~~~-~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~----- 495 (582)
+..... ....++..|+|||++.+. .++.++|||||||++|||++|+.||.... ..+....+......
T Consensus 190 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~----~~~~l~~i~~~~g~p~~~~ 265 (394)
T 4e7w_A 190 KILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGES----GIDQLVEIIKVLGTPSREQ 265 (394)
T ss_dssp EECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHHHHHHCCCCHHH
T ss_pred ccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHHHhCCCCHHH
Confidence 876433 234567889999988764 58999999999999999999999996432 22222222221110
Q ss_pred ------cccc----cccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhc
Q 047954 496 ------EWTA----EIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547 (582)
Q Consensus 496 ------~~~~----~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 547 (582)
.+.. .+...... .........++.+|+.+||+.||++|||+.|+++|.+.-
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~ 326 (394)
T 4e7w_A 266 IKTMNPNYMEHKFPQIRPHPFS-KVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFD 326 (394)
T ss_dssp HHHHCGGGSSSCCCCCCCCCHH-HHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGS
T ss_pred HHhhChhhhhhccccccCCcHH-HhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhh
Confidence 0000 00000000 000001223688999999999999999999999997754
No 227
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=3.3e-39 Score=342.56 Aligned_cols=249 Identities=19% Similarity=0.279 Sum_probs=185.8
Q ss_pred cccccccCceEEEEEEEcCCceEEEEEecCCCcchHHHHHHHHHHHhcC-CCCCccccceEEEeCCeeEEEEEeCCCCCh
Q 047954 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQ-KHPNLLPLLAYYFSNDEKLLVYKFAGNGNL 351 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 351 (582)
.+.||+|+||+||.+...+++.||||++... ..+.+.+|+.++.++ +|||||++++++.+.+..++||||+. |+|
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL 95 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNL 95 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCH
Confidence 4679999999998877778899999998542 345678999999876 89999999999999999999999995 699
Q ss_pred HHHHhcCCCCCCC-CccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCC-------------CceE
Q 047954 352 FNRIHGGKSSKNR-IPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDN-------------EMVL 417 (582)
Q Consensus 352 ~~~l~~~~~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~-------------~~~k 417 (582)
.+++......... ...++..++.++.||+.||+|||+.+ |+||||||+|||++.+ +.+|
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-------ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k 168 (434)
T 2rio_A 96 QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK-------IIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 168 (434)
T ss_dssp HHHHHTC------------CCHHHHHHHHHHHHHHHHHTT-------EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred HHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC-------ccccCCChHhEEEecCcccccccccCCCceEEE
Confidence 9999765432111 11234456789999999999999998 9999999999999754 4799
Q ss_pred EeeccccccccCcc--------cccccccccCCCCCCC-------CCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCC
Q 047954 418 VSDYGFSSLVAQPI--------AAQRMISYKSPEYQSS-------KKISRKSDVWSFGCLLLELLT-GRISTHSAPQGIN 481 (582)
Q Consensus 418 l~DfG~a~~~~~~~--------~~~~~~~y~aPE~~~~-------~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~ 481 (582)
|+|||+++.+.... ...+|+.|+|||++.+ ..++.++|||||||++|||+| |+.||.....
T Consensus 169 L~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~--- 245 (434)
T 2rio_A 169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS--- 245 (434)
T ss_dssp ECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTT---
T ss_pred EcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchh---
Confidence 99999998765432 2347889999998865 678999999999999999999 9999964321
Q ss_pred ccchHHHHHHHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhh
Q 047954 482 GADLCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEI 546 (582)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 546 (582)
.. . ............. .........++.+++.+||+.||++|||+.||++|.+.
T Consensus 246 --~~-~---~i~~~~~~~~~~~-----~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f 299 (434)
T 2rio_A 246 --RE-S---NIIRGIFSLDEMK-----CLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299 (434)
T ss_dssp --HH-H---HHHHTCCCCCCCT-----TCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGG
T ss_pred --hH-H---HHhcCCCCccccc-----ccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCcc
Confidence 00 1 1111111100000 00112334568899999999999999999999998764
No 228
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=3.8e-39 Score=359.23 Aligned_cols=242 Identities=21% Similarity=0.276 Sum_probs=196.5
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCC---CcchHHHHHHHHHHHhcC-CCCCccccceEEEeCCeeEEEEEeCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDL---KPLITEEFRKQLLVIADQ-KHPNLLPLLAYYFSNDEKLLVYKFAG 347 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~ 347 (582)
.+.||+|+||.||+|... +++.||||+++.. .....+.+..|..++..+ +||||+++++++.+.+..|+||||++
T Consensus 346 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~ 425 (674)
T 3pfq_A 346 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 425 (674)
T ss_dssp EEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCC
T ss_pred EEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcC
Confidence 467999999999999965 5678999998642 123346678899999887 79999999999999999999999999
Q ss_pred CCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccc
Q 047954 348 NGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV 427 (582)
Q Consensus 348 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~ 427 (582)
+|+|.+++.... .+++..++.|+.||+.||+|||+.+ ||||||||+||||+.++.+||+|||+|+..
T Consensus 426 gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~g-------IiHrDLKp~NILl~~~g~ikL~DFGla~~~ 492 (674)
T 3pfq_A 426 GGDLMYHIQQVG------RFKEPHAVFYAAEIAIGLFFLQSKG-------IIYRDLKLDNVMLDSEGHIKIADFGMCKEN 492 (674)
T ss_dssp SCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHTS-------EECCCCCSTTEEECSSSCEEECCCTTCEEC
T ss_pred CCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCC-------eEeccCChhhEEEcCCCcEEEeecceeecc
Confidence 999999997542 4889999999999999999999998 999999999999999999999999999864
Q ss_pred cCc----ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccc
Q 047954 428 AQP----IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFD 503 (582)
Q Consensus 428 ~~~----~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 503 (582)
... ....||+.|+|||++.+..|+.++|||||||++|||++|+.||... +..++.. ....... .+ .
T Consensus 493 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~----~~~~~~~---~i~~~~~--~~-p 562 (674)
T 3pfq_A 493 IWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE----DEDELFQ---SIMEHNV--AY-P 562 (674)
T ss_dssp CCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCS----SHHHHHH---HHHSSCC--CC-C
T ss_pred ccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCC----CHHHHHH---HHHhCCC--CC-C
Confidence 222 2345789999999999999999999999999999999999999642 2222222 2211110 00 0
Q ss_pred hhhhhhhchHHHHHHHHHHHHHcccCCCCCCCCh-----HHHHHHHhh
Q 047954 504 SEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEM-----AEVVSELEI 546 (582)
Q Consensus 504 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~-----~evl~~L~~ 546 (582)
. ....++.+|+.+||+.||++||++ +||++|.+.
T Consensus 563 ~---------~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff 601 (674)
T 3pfq_A 563 K---------SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFF 601 (674)
T ss_dssp T---------TSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGG
T ss_pred c---------cCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccc
Confidence 0 112257889999999999999998 888887654
No 229
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.4e-38 Score=331.05 Aligned_cols=256 Identities=18% Similarity=0.311 Sum_probs=192.4
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCC--cchHHHHHHHHHHHhcCCCCCccccceEEEeCCee------EEEE
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK--PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEK------LLVY 343 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~------~lv~ 343 (582)
.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++...+.. ++||
T Consensus 47 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~ 126 (371)
T 4exu_A 47 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 126 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEE
T ss_pred EeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEE
Confidence 467999999999999865 57889999997532 23456788999999999999999999999877654 9999
Q ss_pred EeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccc
Q 047954 344 KFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGF 423 (582)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~ 423 (582)
||+. ++|.+++.. .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 127 e~~~-~~l~~~~~~--------~~~~~~~~~i~~qi~~aL~~LH~~~-------ivH~Dikp~NIll~~~~~~kL~Dfg~ 190 (371)
T 4exu_A 127 PFMQ-TDLQKIMGM--------EFSEEKIQYLVYQMLKGLKYIHSAG-------VVHRDLKPGNLAVNEDCELKILDFGL 190 (371)
T ss_dssp ECCC-EEHHHHTTS--------CCCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred cccc-ccHHHHhhc--------CCCHHHHHHHHHHHHHHHHHHHHCC-------CcCCCcCHHHeEECCCCCEEEEecCc
Confidence 9997 688887732 3889999999999999999999998 99999999999999999999999999
Q ss_pred cccccCcc-cccccccccCCCCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhc---cc
Q 047954 424 SSLVAQPI-AAQRMISYKSPEYQSS-KKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREE---WT 498 (582)
Q Consensus 424 a~~~~~~~-~~~~~~~y~aPE~~~~-~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~---~~ 498 (582)
++...... ...++..|+|||++.+ ..++.++|||||||++|||++|+.||.... ..+....+....... +.
T Consensus 191 a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~----~~~~~~~i~~~~~~~~~~~~ 266 (371)
T 4exu_A 191 ARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD----YLDQLTQILKVTGVPGTEFV 266 (371)
T ss_dssp C--------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSS----HHHHHHHHHHHHCCCCHHHH
T ss_pred ccccccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC----hHHHHHHHHHHhCCCcHHHH
Confidence 98765432 3456889999998877 688999999999999999999999996432 122222221111100 00
Q ss_pred ccccchhh-------------hhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 499 AEIFDSEI-------------SVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 499 ~~~~d~~~-------------~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
..+.+... ............+.+|+.+||+.||++|||+.|+++|.+.-.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~ 329 (371)
T 4exu_A 267 QKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEP 329 (371)
T ss_dssp TTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTT
T ss_pred HHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCccccc
Confidence 00000000 000000111346889999999999999999999999988643
No 230
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5e-39 Score=335.83 Aligned_cols=256 Identities=16% Similarity=0.244 Sum_probs=188.7
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeC---------------
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSN--------------- 336 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~--------------- 336 (582)
.+.||+|+||.||+|.. .+++.||||++..... ...+|+.++++++|||||++++++...
T Consensus 12 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~ 87 (383)
T 3eb0_A 12 GKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHN 87 (383)
T ss_dssp EEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC---------------
T ss_pred EEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCcccccccccccccc
Confidence 46799999999999986 5688999999864332 234799999999999999999998543
Q ss_pred -----------------------CeeEEEEEeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCC
Q 047954 337 -----------------------DEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSR 393 (582)
Q Consensus 337 -----------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ 393 (582)
...++||||++ |+|.+.+...... ...+++..+..++.||+.||+|||+.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g--- 161 (383)
T 3eb0_A 88 KLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRS--GRSIPMNLISIYIYQLFRAVGFIHSLG--- 161 (383)
T ss_dssp ----------------------CCEEEEEECCCS-EEHHHHHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHTTT---
T ss_pred cccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCc---
Confidence 33789999998 5887777542111 225889999999999999999999998
Q ss_pred CCCcceecCCCCCCeeec-CCCceEEeeccccccccCc---ccccccccccCCCCCCCC-CCCcchhHHHHHHHHHHHHh
Q 047954 394 TQSAVIHGNLKSTNILLD-DNEMVLVSDYGFSSLVAQP---IAAQRMISYKSPEYQSSK-KISRKSDVWSFGCLLLELLT 468 (582)
Q Consensus 394 ~~~~ivH~Dlkp~NILl~-~~~~~kl~DfG~a~~~~~~---~~~~~~~~y~aPE~~~~~-~~~~k~DVwS~Gvvl~ellt 468 (582)
|+||||||+|||++ .++.+||+|||+++.+... ....++..|+|||.+.+. .++.++||||+||++|||++
T Consensus 162 ----i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~ 237 (383)
T 3eb0_A 162 ----ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELIL 237 (383)
T ss_dssp ----EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH
T ss_pred ----CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHh
Confidence 99999999999998 6889999999999876433 233467889999988765 48999999999999999999
Q ss_pred CCCCCCCCCCCCCccchHHHHHHHHhhccc---------------ccccchhhhhhhchHHHHHHHHHHHHHcccCCCCC
Q 047954 469 GRISTHSAPQGINGADLCSWVLRAVREEWT---------------AEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEK 533 (582)
Q Consensus 469 G~~P~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~ 533 (582)
|+.||.... ..+....+......... ......... .........++.+|+.+||+.||++
T Consensus 238 g~~pf~~~~----~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~ 312 (383)
T 3eb0_A 238 GKPLFSGET----SIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWR-KILPEGTPSLAIDLLEQILRYEPDL 312 (383)
T ss_dssp SSCSSCCSS----HHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHH-HHSCTTCCHHHHHHHHHHCCSSGGG
T ss_pred CCCCCCCCC----hHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHH-hhCCCCCCHHHHHHHHHHccCChhh
Confidence 999996432 22222222221111000 000000000 0000111235789999999999999
Q ss_pred CCChHHHHHHHhhc
Q 047954 534 RPEMAEVVSELEII 547 (582)
Q Consensus 534 RPs~~evl~~L~~i 547 (582)
|||+.|+++|.+.-
T Consensus 313 R~t~~e~l~hp~f~ 326 (383)
T 3eb0_A 313 RINPYEAMAHPFFD 326 (383)
T ss_dssp SCCHHHHHTSGGGH
T ss_pred CCCHHHHhcCHHHH
Confidence 99999999987643
No 231
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.7e-38 Score=330.22 Aligned_cols=263 Identities=18% Similarity=0.295 Sum_probs=196.3
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCCCcchHHHHHHHHHHHhcCC-----------CCCccccceEEEeCC---
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDLKPLITEEFRKQLLVIADQK-----------HPNLLPLLAYYFSND--- 337 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------H~niv~l~~~~~~~~--- 337 (582)
.+.||+|+||.||+|.. .+++.||||++.. .....+.+.+|+.++.+++ ||||+++++++...+
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 102 (373)
T 1q8y_A 24 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG-DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNG 102 (373)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECS-CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTE
T ss_pred EEeeeecCCeEEEEEEecCCCcEEEEEEecC-CccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCC
Confidence 46799999999999996 5678899999864 2334567889999998876 899999999998654
Q ss_pred -eeEEEEEeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhcc-CCCCCCCcceecCCCCCCeeec----
Q 047954 338 -EKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK-DKSRTQSAVIHGNLKSTNILLD---- 411 (582)
Q Consensus 338 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~~~~~ivH~Dlkp~NILl~---- 411 (582)
..++||||+ +++|.+++..... ..+++..++.++.||+.||+|||++ + |+||||||+|||++
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~~~~----~~~~~~~~~~i~~qi~~aL~~lH~~~~-------ivH~Dikp~NIll~~~~~ 170 (373)
T 1q8y_A 103 VHVVMVFEVL-GENLLALIKKYEH----RGIPLIYVKQISKQLLLGLDYMHRRCG-------IIHTDIKPENVLMEIVDS 170 (373)
T ss_dssp EEEEEEECCC-CEEHHHHHHHTTT----SCCCHHHHHHHHHHHHHHHHHHHHTTC-------EECSCCSGGGEEEEEEET
T ss_pred ceEEEEEecC-CCCHHHHHHHhhc----cCCcHHHHHHHHHHHHHHHHHHHhcCC-------EEecCCChHHeEEeccCC
Confidence 689999999 8899999976432 2488899999999999999999998 7 99999999999994
Q ss_pred --CCCceEEeeccccccccCc-ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCC--ccchH
Q 047954 412 --DNEMVLVSDYGFSSLVAQP-IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGIN--GADLC 486 (582)
Q Consensus 412 --~~~~~kl~DfG~a~~~~~~-~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~--~~~~~ 486 (582)
..+.+||+|||+++..... ....++..|+|||++.+..++.++|||||||++|||+||+.||........ ..+..
T Consensus 171 ~~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~ 250 (373)
T 1q8y_A 171 PENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHI 250 (373)
T ss_dssp TTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHH
T ss_pred CcCcceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHH
Confidence 4457999999999876543 334578899999999999999999999999999999999999975432110 11111
Q ss_pred HHHHHHHhhc---------ccccccc-----------------hhh-hhhhchHHHHHHHHHHHHHcccCCCCCCCChHH
Q 047954 487 SWVLRAVREE---------WTAEIFD-----------------SEI-SVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAE 539 (582)
Q Consensus 487 ~~~~~~~~~~---------~~~~~~d-----------------~~~-~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~e 539 (582)
..+....... +....+. ..+ ...........++.+|+.+||+.||++|||++|
T Consensus 251 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 330 (373)
T 1q8y_A 251 AQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGG 330 (373)
T ss_dssp HHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHH
T ss_pred HHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHH
Confidence 1111111000 0000000 000 000122345567889999999999999999999
Q ss_pred HHHHHhhcc
Q 047954 540 VVSELEIIK 548 (582)
Q Consensus 540 vl~~L~~i~ 548 (582)
+++|.+...
T Consensus 331 ll~hp~f~~ 339 (373)
T 1q8y_A 331 LVNHPWLKD 339 (373)
T ss_dssp HHTCGGGTT
T ss_pred HhhChhhhc
Confidence 999988654
No 232
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=4.9e-39 Score=339.77 Aligned_cols=258 Identities=20% Similarity=0.286 Sum_probs=188.2
Q ss_pred ccccccccCceEEEEEEEc-CCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCC------eeEEEEE
Q 047954 272 PAEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSND------EKLLVYK 344 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~------~~~lv~e 344 (582)
..+.||+|+||.||+|+.. +++.||||++..... .+.+|++++++++|||||+++++|.... ..++|||
T Consensus 58 ~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e 133 (420)
T 1j1b_A 58 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD 133 (420)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEE
T ss_pred eeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehh
Confidence 3578999999999999975 588999999865322 2347999999999999999999986521 3679999
Q ss_pred eCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCC-CceEEeeccc
Q 047954 345 FAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDN-EMVLVSDYGF 423 (582)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~-~~~kl~DfG~ 423 (582)
|+++ +|.+.+..... ....+++..++.++.||++||+|||+.+ |+||||||+|||++.+ +.+||+|||+
T Consensus 134 ~~~~-~l~~~~~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~-------ivHrDlkp~NILl~~~~~~~kl~DFG~ 203 (420)
T 1j1b_A 134 YVPE-TVYRVARHYSR--AKQTLPVIYVKLYMYQLFRSLAYIHSFG-------ICHRDIKPQNLLLDPDTAVLKLCDFGS 203 (420)
T ss_dssp CCCE-EHHHHHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHTTT-------EECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred cccc-cHHHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-------ccccCCChhhEEEeCCCCeEEeccchh
Confidence 9975 67666543211 1235889999999999999999999998 9999999999999965 5689999999
Q ss_pred cccccCc---ccccccccccCCCCCCCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcc--
Q 047954 424 SSLVAQP---IAAQRMISYKSPEYQSSK-KISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEW-- 497 (582)
Q Consensus 424 a~~~~~~---~~~~~~~~y~aPE~~~~~-~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~-- 497 (582)
++.+... ....++..|+|||++.+. .++.++|||||||++|||++|+.||.... ..+....+........
T Consensus 204 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~----~~~~l~~i~~~lg~p~~~ 279 (420)
T 1j1b_A 204 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS----GVDQLVEIIKVLGTPTRE 279 (420)
T ss_dssp CEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHHHHHHCSCCHH
T ss_pred hhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHHHhCCCCHH
Confidence 9876433 234567889999998764 78999999999999999999999996432 1222222211111000
Q ss_pred --------cccccchhhhhh----hchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhc
Q 047954 498 --------TAEIFDSEISVQ----RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547 (582)
Q Consensus 498 --------~~~~~d~~~~~~----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 547 (582)
..+...+.+... ........++.+|+.+||..||++|||+.|+++|.+.-
T Consensus 280 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~ 341 (420)
T 1j1b_A 280 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFD 341 (420)
T ss_dssp HHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGG
T ss_pred HHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhc
Confidence 000000000000 00001123678999999999999999999999997753
No 233
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.1e-38 Score=329.15 Aligned_cols=257 Identities=20% Similarity=0.290 Sum_probs=193.9
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCC-cchHHHHHHHHHHHhcCCCCCccccceEEEeC-----CeeEEEEEe
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK-PLITEEFRKQLLVIADQKHPNLLPLLAYYFSN-----DEKLLVYKF 345 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~~~lv~e~ 345 (582)
.+.||+|+||.||+|... +++.||||++.... ......+.+|+.++++++||||+++++++... ...++||||
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~ 95 (353)
T 2b9h_A 16 KSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQEL 95 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECC
T ss_pred eeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEec
Confidence 467999999999999975 57889999996433 33456788999999999999999999988764 578999999
Q ss_pred CCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccc
Q 047954 346 AGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSS 425 (582)
Q Consensus 346 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~ 425 (582)
+. |+|.+++... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 96 ~~-~~L~~~~~~~-------~~~~~~~~~~~~qi~~~L~~LH~~~-------ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (353)
T 2b9h_A 96 MQ-TDLHRVISTQ-------MLSDDHIQYFIYQTLRAVKVLHGSN-------VIHRDLKPSNLLINSNCDLKVCDFGLAR 160 (353)
T ss_dssp CS-EEHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHHHTT-------EECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred cC-ccHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHHCC-------eecCCCCHHHeEEcCCCcEEEEeccccc
Confidence 97 6999998753 4888999999999999999999998 9999999999999999999999999998
Q ss_pred cccCcc--------------cccccccccCCCCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHH
Q 047954 426 LVAQPI--------------AAQRMISYKSPEYQSS-KKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVL 490 (582)
Q Consensus 426 ~~~~~~--------------~~~~~~~y~aPE~~~~-~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~ 490 (582)
...... ...++..|+|||++.+ ..++.++|||||||++|||++|+.||.... ..+....+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~----~~~~~~~~~ 236 (353)
T 2b9h_A 161 IIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRD----YRHQLLLIF 236 (353)
T ss_dssp ECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS----HHHHHHHHH
T ss_pred ccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCC----cHHHHHHHH
Confidence 764321 1245788999998654 678999999999999999999999996432 111111111
Q ss_pred HHHhhcccc----cccchhh-------------hhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 491 RAVREEWTA----EIFDSEI-------------SVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 491 ~~~~~~~~~----~~~d~~~-------------~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
......... .+..... ...........++.+++.+||+.||++|||+.|+++|.+.-.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 311 (353)
T 2b9h_A 237 GIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQT 311 (353)
T ss_dssp HHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred HHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence 111100000 0000000 000000112236788999999999999999999999987644
No 234
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=4.1e-38 Score=315.50 Aligned_cols=246 Identities=22% Similarity=0.303 Sum_probs=195.5
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCC--CcchHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDL--KPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNG 349 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 349 (582)
.+.||+|+||.||+|... +++.||+|++... .....+.+.+|+.++++++||||+++++++...+..++||||++++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 106 (287)
T 2wei_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG 106 (287)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCC
Confidence 467999999999999975 6788999998643 2345678999999999999999999999999999999999999999
Q ss_pred ChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCC---CceEEeecccccc
Q 047954 350 NLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDN---EMVLVSDYGFSSL 426 (582)
Q Consensus 350 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~---~~~kl~DfG~a~~ 426 (582)
+|.+++.... .+++..++.++.||+.||.|||+.+ |+||||||+||+++.+ +.+||+|||++..
T Consensus 107 ~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~LH~~~-------i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~ 173 (287)
T 2wei_A 107 ELFDEIIKRK------RFSEHDAARIIKQVFSGITYMHKHN-------IVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (287)
T ss_dssp BHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCCGGGEEESCSSTTCCEEECSTTGGGT
T ss_pred CHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------eeccCCChhhEEEecCCCcccEEEeccCccee
Confidence 9999886432 4889999999999999999999998 9999999999999754 4699999999987
Q ss_pred ccCcc---cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccc
Q 047954 427 VAQPI---AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFD 503 (582)
Q Consensus 427 ~~~~~---~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 503 (582)
..... ...++..|+|||.+.+ .++.++||||||+++|+|++|+.||.... ..++...+ .........
T Consensus 174 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~----~~~~~~~~---~~~~~~~~~-- 243 (287)
T 2wei_A 174 FQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN----EYDILKRV---ETGKYAFDL-- 243 (287)
T ss_dssp BCCCSSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHH---HHCCCCCCS--
T ss_pred ecCCCccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCC----HHHHHHHH---HcCCCCCCc--
Confidence 65432 2236778999998875 48999999999999999999999996431 12222211 111111000
Q ss_pred hhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhc
Q 047954 504 SEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEII 547 (582)
Q Consensus 504 ~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 547 (582)
+. ......++.+++.+||+.||++|||+.|++++.+..
T Consensus 244 ~~------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~ 281 (287)
T 2wei_A 244 PQ------WRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ 281 (287)
T ss_dssp GG------GTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHH
T ss_pred hh------hhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHh
Confidence 00 001123578899999999999999999999987654
No 235
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.7e-38 Score=320.01 Aligned_cols=246 Identities=20% Similarity=0.356 Sum_probs=187.8
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEe-------------CCe
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFS-------------NDE 338 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~-------------~~~ 338 (582)
.+.||+|+||.||+|... +++.||||++... ....+.+.+|+.++++++||||+++++++.. ...
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (303)
T 1zy4_A 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKST 89 (303)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEE
T ss_pred hheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCc
Confidence 467999999999999964 6889999998542 2345678999999999999999999999865 346
Q ss_pred eEEEEEeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEE
Q 047954 339 KLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLV 418 (582)
Q Consensus 339 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl 418 (582)
.++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~-------i~H~dlkp~Nil~~~~~~~kl 157 (303)
T 1zy4_A 90 LFIQMEYCENGTLYDLIHSEN-----LNQQRDEYWRLFRQILEALSYIHSQG-------IIHRDLKPMNIFIDESRNVKI 157 (303)
T ss_dssp EEEEEECCCSCBHHHHHHHSC-----GGGCHHHHHHHHHHHHHHHHHHHHTT-------CCCSCCCGGGEEECTTSCEEE
T ss_pred eEEEEecCCCCCHHHhhhccc-----cccchHHHHHHHHHHHHHHHHHHhCC-------eecccCCHHhEEEcCCCCEEE
Confidence 789999999999999997532 24778889999999999999999998 999999999999999999999
Q ss_pred eeccccccccCc------------------ccccccccccCCCCCCCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCC
Q 047954 419 SDYGFSSLVAQP------------------IAAQRMISYKSPEYQSSK-KISRKSDVWSFGCLLLELLTGRISTHSAPQG 479 (582)
Q Consensus 419 ~DfG~a~~~~~~------------------~~~~~~~~y~aPE~~~~~-~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~ 479 (582)
+|||+++..... ....++..|+|||.+.+. .++.++|||||||++|||++ ||..
T Consensus 158 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~---- 230 (303)
T 1zy4_A 158 GDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFST---- 230 (303)
T ss_dssp CCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSS----
T ss_pred eeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCC----
Confidence 999999876422 122366789999998764 68999999999999999998 5531
Q ss_pred CCccchHHHHHHHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 480 INGADLCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
..+....... ..... .. +.+.. .......+.+++.+||+.||++|||+.|++++.|...
T Consensus 231 --~~~~~~~~~~-~~~~~-~~-~~~~~-----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~ 289 (303)
T 1zy4_A 231 --GMERVNILKK-LRSVS-IE-FPPDF-----DDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPV 289 (303)
T ss_dssp --HHHHHHHHHH-HHSTT-CC-CCTTC-----CTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCC
T ss_pred --chhHHHHHHh-ccccc-cc-cCccc-----cccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCC
Confidence 1111111111 11110 00 00000 1112235778999999999999999999999887543
No 236
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=4.1e-38 Score=328.76 Aligned_cols=260 Identities=20% Similarity=0.276 Sum_probs=196.5
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCCcchHHHHHHHHHHHhcCC-CC-----CccccceEEEeCCeeEEEEEe
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKPLITEEFRKQLLVIADQK-HP-----NLLPLLAYYFSNDEKLLVYKF 345 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-H~-----niv~l~~~~~~~~~~~lv~e~ 345 (582)
.+.||+|+||+||+|... +++.||||+++.. ....+.+..|+.++..++ |+ +|+++++++...+..++||||
T Consensus 59 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 137 (382)
T 2vx3_A 59 DSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEM 137 (382)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEEC
T ss_pred EEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEec
Confidence 467999999999999865 5778999999743 334567788888888874 44 499999999999999999999
Q ss_pred CCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeec--CCCceEEeeccc
Q 047954 346 AGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLD--DNEMVLVSDYGF 423 (582)
Q Consensus 346 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~--~~~~~kl~DfG~ 423 (582)
+. |+|.+++..... ..+++..+..++.|++.||.|||++. .+||||||||+|||++ .++.+||+|||+
T Consensus 138 ~~-~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~-----~~ivHrDlkp~NIll~~~~~~~~kL~DFG~ 207 (382)
T 2vx3_A 138 LS-YNLYDLLRNTNF----RGVSLNLTRKFAQQMCTALLFLATPE-----LSIIHCDLKPENILLCNPKRSAIKIVDFGS 207 (382)
T ss_dssp CC-CBHHHHHHHTTT----SCCCHHHHHHHHHHHHHHHHHHTSTT-----TCEECCCCSGGGEEESSTTSCCEEECCCTT
T ss_pred CC-CCHHHHHhhcCc----CCCCHHHHHHHHHHHHHHHHHhccCC-----CCEEcCCCCcccEEEecCCCCcEEEEeccC
Confidence 96 599999976532 24889999999999999999999632 1399999999999994 577899999999
Q ss_pred cccccCc-ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhc------
Q 047954 424 SSLVAQP-IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREE------ 496 (582)
Q Consensus 424 a~~~~~~-~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~------ 496 (582)
++..... ....+++.|+|||++.+..++.++|||||||++|||+||+.||.... ..+....+.......
T Consensus 208 a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~----~~~~~~~i~~~~~~~~~~~~~ 283 (382)
T 2vx3_A 208 SCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN----EVDQMNKIVEVLGIPPAHILD 283 (382)
T ss_dssp CEETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHHHHHHCSCCHHHHT
T ss_pred ceecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHHHhCCCCHHHHH
Confidence 9877543 33457889999999999999999999999999999999999996432 222222222211100
Q ss_pred -------ccccccchh------------------------h------------hhhhchHHHHHHHHHHHHHcccCCCCC
Q 047954 497 -------WTAEIFDSE------------------------I------------SVQRSAAHGMLKLLQVAIQCCNKSPEK 533 (582)
Q Consensus 497 -------~~~~~~d~~------------------------~------------~~~~~~~~~~~~l~~l~~~Cl~~dP~~ 533 (582)
....+.+.. + ........+..++.+|+.+||+.||++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~ 363 (382)
T 2vx3_A 284 QAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKT 363 (382)
T ss_dssp TCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTT
T ss_pred hhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhh
Confidence 000000000 0 000011223357889999999999999
Q ss_pred CCChHHHHHHHhhc
Q 047954 534 RPEMAEVVSELEII 547 (582)
Q Consensus 534 RPs~~evl~~L~~i 547 (582)
|||++|+++|.+.-
T Consensus 364 Rpta~e~L~hp~f~ 377 (382)
T 2vx3_A 364 RIQPYYALQHSFFK 377 (382)
T ss_dssp SCCHHHHTTSGGGC
T ss_pred CCCHHHHhcCcccc
Confidence 99999999988754
No 237
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=4.1e-38 Score=324.77 Aligned_cols=258 Identities=19% Similarity=0.320 Sum_probs=197.0
Q ss_pred cccccccCceEEEEEEEcC--CceEEEEEecCCCcchHHHHHHHHHHHhcCCCCC------ccccceEEEeCCeeEEEEE
Q 047954 273 AEGLGKGIFGNSYKALLEG--RAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPN------LLPLLAYYFSNDEKLLVYK 344 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~--~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~n------iv~l~~~~~~~~~~~lv~e 344 (582)
.+.||+|+||.||+|.... +..||+|+++.. ....+.+.+|+.++++++|++ ++.+++++...+..++|||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e 102 (355)
T 2eu9_A 24 VGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFE 102 (355)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEE
T ss_pred EEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEe
Confidence 4679999999999999653 368999998643 344567889999999987766 8999999999999999999
Q ss_pred eCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeee--------------
Q 047954 345 FAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILL-------------- 410 (582)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl-------------- 410 (582)
|+ +++|.+++..... ..+++..++.++.||+.||+|||+.+ |+||||||+|||+
T Consensus 103 ~~-~~~l~~~l~~~~~----~~~~~~~~~~i~~qi~~~L~~lH~~~-------ivH~Dlkp~NIll~~~~~~~~~~~~~~ 170 (355)
T 2eu9_A 103 LL-GKNTFEFLKENNF----QPYPLPHVRHMAYQLCHALRFLHENQ-------LTHTDLKPENILFVNSEFETLYNEHKS 170 (355)
T ss_dssp CC-CCBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHTTT-------EECCCCCGGGEEESCCCEEEEECCC-C
T ss_pred cc-CCChHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHCC-------cccCCCCHHHEEEeccccccccccccc
Confidence 99 6788887765432 25889999999999999999999998 9999999999999
Q ss_pred -----cCCCceEEeeccccccccCc-ccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccc
Q 047954 411 -----DDNEMVLVSDYGFSSLVAQP-IAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGAD 484 (582)
Q Consensus 411 -----~~~~~~kl~DfG~a~~~~~~-~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~ 484 (582)
+.++.+||+|||+++..... ....++..|+|||++.+..++.++|||||||++|||++|+.||.... ..+
T Consensus 171 ~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~----~~~ 246 (355)
T 2eu9_A 171 CEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHE----NRE 246 (355)
T ss_dssp CCEEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS----HHH
T ss_pred ccccccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCC----HHH
Confidence 56789999999999875443 33457889999999999999999999999999999999999996432 122
Q ss_pred hHHHHHHHHhhcccccc----------------cch-----h---------hhhhhchHHHHHHHHHHHHHcccCCCCCC
Q 047954 485 LCSWVLRAVREEWTAEI----------------FDS-----E---------ISVQRSAAHGMLKLLQVAIQCCNKSPEKR 534 (582)
Q Consensus 485 ~~~~~~~~~~~~~~~~~----------------~d~-----~---------~~~~~~~~~~~~~l~~l~~~Cl~~dP~~R 534 (582)
....+...... ..... .+. . ............++.+|+.+||+.||++|
T Consensus 247 ~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 325 (355)
T 2eu9_A 247 HLVMMEKILGP-IPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQR 325 (355)
T ss_dssp HHHHHHHHHCC-CCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred HHHHHHHHcCC-CcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhC
Confidence 22222221110 00000 000 0 00000111234478899999999999999
Q ss_pred CChHHHHHHHhhcc
Q 047954 535 PEMAEVVSELEIIK 548 (582)
Q Consensus 535 Ps~~evl~~L~~i~ 548 (582)
||+.|+++|.+.-.
T Consensus 326 pt~~e~l~hp~f~~ 339 (355)
T 2eu9_A 326 ITLAEALLHPFFAG 339 (355)
T ss_dssp CCHHHHTTSGGGGG
T ss_pred cCHHHHhcChhhcC
Confidence 99999999877543
No 238
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=5.2e-38 Score=324.43 Aligned_cols=256 Identities=19% Similarity=0.314 Sum_probs=191.9
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCC--cchHHHHHHHHHHHhcCCCCCccccceEEEeCCe------eEEEE
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK--PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDE------KLLVY 343 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~------~~lv~ 343 (582)
.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++..... .++||
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~ 108 (353)
T 3coi_A 29 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 108 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEE
T ss_pred eeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEe
Confidence 467999999999999964 67899999996532 2335678899999999999999999999987654 49999
Q ss_pred EeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccc
Q 047954 344 KFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGF 423 (582)
Q Consensus 344 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~ 423 (582)
||+. |+|.+++.. .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 109 e~~~-~~l~~~~~~--------~~~~~~~~~i~~qi~~al~~LH~~~-------ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 109 PFMQ-TDLQKIMGL--------KFSEEKIQYLVYQMLKGLKYIHSAG-------VVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp ECCS-EEGGGTTTS--------CCCHHHHHHHHHHHHHHHHHHHHTT-------CCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred cccc-CCHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHCC-------cccCCCCHHHEeECCCCcEEEeeccc
Confidence 9997 688877632 3888999999999999999999998 99999999999999999999999999
Q ss_pred cccccCcc-cccccccccCCCCCCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhh---ccc
Q 047954 424 SSLVAQPI-AAQRMISYKSPEYQSS-KKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVRE---EWT 498 (582)
Q Consensus 424 a~~~~~~~-~~~~~~~y~aPE~~~~-~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~---~~~ 498 (582)
++...... ...++..|+|||.+.+ ..++.++|||||||++|||++|+.||.... ..+....+...... .+.
T Consensus 173 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~----~~~~~~~i~~~~~~~~~~~~ 248 (353)
T 3coi_A 173 ARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD----YLDQLTQILKVTGVPGTEFV 248 (353)
T ss_dssp TTC--------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSC----HHHHHHHHHHHHCBCCHHHH
T ss_pred ccCCCCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHHHhCCCCHHHH
Confidence 98765432 3356889999998876 678999999999999999999999996432 12222222111100 000
Q ss_pred ccccchhh-------------hhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 499 AEIFDSEI-------------SVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 499 ~~~~d~~~-------------~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
..+.+... ...........++.+++.+||+.||++|||+.|+++|.+...
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~ 311 (353)
T 3coi_A 249 QKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEP 311 (353)
T ss_dssp TTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTT
T ss_pred HHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhh
Confidence 00000000 000000112346788999999999999999999999987543
No 239
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=4e-38 Score=325.91 Aligned_cols=261 Identities=16% Similarity=0.236 Sum_probs=182.0
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEEEeCCe-------eEEEEE
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDE-------KLLVYK 344 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~-------~~lv~e 344 (582)
.+.||+|+||.||+|... ++..||||++.... .....+.+++..+.+++||||+++++++..... .++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e 106 (360)
T 3e3p_A 28 ERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVME 106 (360)
T ss_dssp C----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEE
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEee
Confidence 467999999999999975 57889999986432 233456778888899999999999999976443 789999
Q ss_pred eCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHh--ccCCCCCCCcceecCCCCCCeeecC-CCceEEeec
Q 047954 345 FAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH--HKDKSRTQSAVIHGNLKSTNILLDD-NEMVLVSDY 421 (582)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--~~~~~~~~~~ivH~Dlkp~NILl~~-~~~~kl~Df 421 (582)
|+++ +|.+.+..... ....+++..+..++.|++.||.||| +.+ |+||||||+|||++. ++.+||+||
T Consensus 107 ~~~~-~l~~~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~~~-------ivH~Dlkp~NIll~~~~~~~kl~Df 176 (360)
T 3e3p_A 107 YVPD-TLHRCCRNYYR--RQVAPPPILIKVFLFQLIRSIGCLHLPSVN-------VCHRDIKPHNVLVNEADGTLKLCDF 176 (360)
T ss_dssp CCSC-BHHHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHTSTTTC-------CBCSCCCGGGEEEETTTTEEEECCC
T ss_pred cccc-cHHHHHHHHhh--cccCCCHHHHHHHHHHHHHHHHHHhCCCCC-------eecCcCCHHHEEEeCCCCcEEEeeC
Confidence 9976 55554432111 1235788899999999999999999 776 999999999999996 899999999
Q ss_pred cccccccCcc---cccccccccCCCCCCCC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcc
Q 047954 422 GFSSLVAQPI---AAQRMISYKSPEYQSSK-KISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEW 497 (582)
Q Consensus 422 G~a~~~~~~~---~~~~~~~y~aPE~~~~~-~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (582)
|+++...... ...++..|+|||++.+. .++.++|||||||++|||+||+.||.... .......+.+......
T Consensus 177 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~----~~~~~~~~~~~~~~~~ 252 (360)
T 3e3p_A 177 GSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDN----SAGQLHEIVRVLGCPS 252 (360)
T ss_dssp TTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHHHHHHCCCC
T ss_pred CCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCC----hHHHHHHHHHHcCCCC
Confidence 9998765432 33467889999988665 48999999999999999999999996532 2222222222111000
Q ss_pred -------cccccchhhh----------hhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 498 -------TAEIFDSEIS----------VQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 498 -------~~~~~d~~~~----------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
.....+.... ..........++.+|+.+||+.||++|||+.|+++|.+.-.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~ 320 (360)
T 3e3p_A 253 REVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDE 320 (360)
T ss_dssp HHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGG
T ss_pred HHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccc
Confidence 0000000000 00000112346889999999999999999999999987654
No 240
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=2e-38 Score=322.23 Aligned_cols=248 Identities=20% Similarity=0.310 Sum_probs=175.4
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCCcc-h-HHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKPL-I-TEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNG 349 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~-~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 349 (582)
.+.||+|+||.||+|... +++.||||++...... . .+.+..+..+++.++||||+++++++...+..++||||+ ++
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~ 108 (318)
T 2dyl_A 30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GT 108 (318)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SE
T ss_pred cceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-CC
Confidence 467999999999999975 6789999999754322 2 233445556788889999999999999999999999999 44
Q ss_pred ChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhcc-CCCCCCCcceecCCCCCCeeecCCCceEEeecccccccc
Q 047954 350 NLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK-DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428 (582)
Q Consensus 350 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~ 428 (582)
.+..+..... ..+++..+..++.||+.||.|||+. + |+||||||+|||++.++.+||+|||+++...
T Consensus 109 ~~~~l~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~~-------i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 176 (318)
T 2dyl_A 109 CAEKLKKRMQ-----GPIPERILGKMTVAIVKALYYLKEKHG-------VIHRDVKPSNILLDERGQIKLCDFGISGRLV 176 (318)
T ss_dssp EHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHHHHC-------CCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred cHHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHhhCC-------EEeCCCCHHHEEECCCCCEEEEECCCchhcc
Confidence 5555443221 2488899999999999999999995 7 9999999999999999999999999997664
Q ss_pred Ccc---cccccccccCCCCCC-----CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhccccc
Q 047954 429 QPI---AAQRMISYKSPEYQS-----SKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAE 500 (582)
Q Consensus 429 ~~~---~~~~~~~y~aPE~~~-----~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (582)
... ...++..|+|||.+. ...++.++|||||||++|||++|+.||.... .. ........... ...
T Consensus 177 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~---~~---~~~~~~~~~~~-~~~ 249 (318)
T 2dyl_A 177 DDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCK---TD---FEVLTKVLQEE-PPL 249 (318)
T ss_dssp ----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCC---SH---HHHHHHHHHSC-CCC
T ss_pred CCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCC---cc---HHHHHHHhccC-CCC
Confidence 432 234678899999984 4578999999999999999999999996421 11 11122222211 111
Q ss_pred ccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 501 IFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 501 ~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
... .. ....++.+++.+||+.||++|||+.|++++.+...
T Consensus 250 ~~~-----~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~ 289 (318)
T 2dyl_A 250 LPG-----HM---GFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKR 289 (318)
T ss_dssp CCS-----SS---CCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHH
T ss_pred CCc-----cC---CCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHh
Confidence 100 00 01125778999999999999999999999877543
No 241
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=7e-39 Score=327.27 Aligned_cols=256 Identities=21% Similarity=0.280 Sum_probs=176.6
Q ss_pred cccccccCceEEEEEEEc-CCceEEEEEecCCC-cchHHHHHHHHH-HHhcCCCCCccccceEEEeCCeeEEEEEeCCCC
Q 047954 273 AEGLGKGIFGNSYKALLE-GRAPVVVKRLRDLK-PLITEEFRKQLL-VIADQKHPNLLPLLAYYFSNDEKLLVYKFAGNG 349 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~-~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 349 (582)
.+.||+|+||.||+|... +++.||||+++... ......+..|+. +++.++||||+++++++...+..++||||+.+
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~- 105 (327)
T 3aln_A 27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST- 105 (327)
T ss_dssp -CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE-
T ss_pred hheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC-
Confidence 467999999999999975 67889999997543 233445566665 67778999999999999999999999999975
Q ss_pred ChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhcc-CCCCCCCcceecCCCCCCeeecCCCceEEeecccccccc
Q 047954 350 NLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHK-DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428 (582)
Q Consensus 350 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~ 428 (582)
+|.+++...... ....+++..+..++.|++.||.|||+. + |+||||||+|||++.++.+||+|||+++...
T Consensus 106 ~l~~~~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~-------ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 177 (327)
T 3aln_A 106 SFDKFYKYVYSV-LDDVIPEEILGKITLATVKALNHLKENLK-------IIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177 (327)
T ss_dssp EHHHHHHHHHHT-TCCCCCHHHHHHHHHHHHHHHHHHHHHHS-------CCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred ChHHHHHHHHhh-hcccCcHHHHHHHHHHHHHHHHHHhccCC-------EeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence 887777531110 122588899999999999999999998 7 9999999999999999999999999998765
Q ss_pred Ccc---cccccccccCCCCC----CCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccc
Q 047954 429 QPI---AAQRMISYKSPEYQ----SSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEI 501 (582)
Q Consensus 429 ~~~---~~~~~~~y~aPE~~----~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (582)
... ...++..|+|||.+ .+..++.++|||||||++|||++|+.||...... ...+.... ......+
T Consensus 178 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~~~~-~~~~~~~ 250 (327)
T 3aln_A 178 DSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV------FDQLTQVV-KGDPPQL 250 (327)
T ss_dssp ----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------------CCCC-CSCCCCC
T ss_pred cccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH------HHHHHHHh-cCCCCCC
Confidence 432 22477889999998 4567899999999999999999999999643211 00000000 0000000
Q ss_pred cchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccC
Q 047954 502 FDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVT 550 (582)
Q Consensus 502 ~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 550 (582)
... ........+.+++.+||+.||++|||+.|++++.+.....
T Consensus 251 ~~~------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~ 293 (327)
T 3aln_A 251 SNS------EEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYE 293 (327)
T ss_dssp CCC------SSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred CCc------ccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHhH
Confidence 000 0001123578899999999999999999999998766543
No 242
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.6e-38 Score=330.62 Aligned_cols=242 Identities=17% Similarity=0.232 Sum_probs=183.0
Q ss_pred cccccccCceEEEEEEEcCCceEEEEEecCCCcchHHHHHHHHHHHhcC-CCCCccccceEEEeCCeeEEEEEeCCCCCh
Q 047954 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQ-KHPNLLPLLAYYFSNDEKLLVYKFAGNGNL 351 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 351 (582)
.+.||+|+||+||.....+++.||||++..... ..+.+|+.+++++ +|||||++++++.+....++||||+. |+|
T Consensus 29 ~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L 104 (432)
T 3p23_A 29 KDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATL 104 (432)
T ss_dssp EEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEH
T ss_pred CCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCH
Confidence 467999999997766667788999999965332 2356899999998 89999999999999999999999996 699
Q ss_pred HHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecC-----CCceEEeecccccc
Q 047954 352 FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDD-----NEMVLVSDYGFSSL 426 (582)
Q Consensus 352 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~-----~~~~kl~DfG~a~~ 426 (582)
.+++..... .+....++.++.||+.||+|||+.+ |+||||||+|||++. ...+||+|||+++.
T Consensus 105 ~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~-------ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~ 172 (432)
T 3p23_A 105 QEYVEQKDF-----AHLGLEPITLLQQTTSGLAHLHSLN-------IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK 172 (432)
T ss_dssp HHHHHSSSC-----CCCSSCHHHHHHHHHHHHHHHHHTT-------CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEEC
T ss_pred HHHHHhcCC-----CccchhHHHHHHHHHHHHHHHHHCc-------CEeCCCCHHHEEEecCCCCCceeEEEecccceee
Confidence 999975532 2445567789999999999999998 999999999999953 34588999999987
Q ss_pred ccCc-------ccccccccccCCCCCC---CCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCCCCccchHHHHHHHHhh
Q 047954 427 VAQP-------IAAQRMISYKSPEYQS---SKKISRKSDVWSFGCLLLELLT-GRISTHSAPQGINGADLCSWVLRAVRE 495 (582)
Q Consensus 427 ~~~~-------~~~~~~~~y~aPE~~~---~~~~~~k~DVwS~Gvvl~ellt-G~~P~~~~~~~~~~~~~~~~~~~~~~~ 495 (582)
.... ....+|+.|+|||++. ...++.++|||||||++|||+| |+.||..... ..... ...
T Consensus 173 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~--------~~~~~-~~~ 243 (432)
T 3p23_A 173 LAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ--------RQANI-LLG 243 (432)
T ss_dssp C------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT--------HHHHH-HTT
T ss_pred ccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH--------HHHHH-Hhc
Confidence 6532 2344789999999987 4567889999999999999999 9999853211 11111 111
Q ss_pred cccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhh
Q 047954 496 EWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEI 546 (582)
Q Consensus 496 ~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 546 (582)
........+ .......+.+|+.+||+.||++|||+.||++|.+.
T Consensus 244 ~~~~~~~~~-------~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f 287 (432)
T 3p23_A 244 ACSLDCLHP-------EKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287 (432)
T ss_dssp CCCCTTSCT-------TCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTT
T ss_pred cCCccccCc-------cccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccc
Confidence 111111111 11122346789999999999999999999988654
No 243
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.7e-38 Score=318.85 Aligned_cols=238 Identities=22% Similarity=0.378 Sum_probs=186.6
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCCCcc------hHHHHHHHHHHHhcC----CCCCccccceEEEeCCeeEE
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDLKPL------ITEEFRKQLLVIADQ----KHPNLLPLLAYYFSNDEKLL 341 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l----~H~niv~l~~~~~~~~~~~l 341 (582)
.+.||+|+||.||+|.. .+++.||||++...... ....+.+|+.++.++ +||||+++++++...+..++
T Consensus 36 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~ 115 (312)
T 2iwi_A 36 GPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFML 115 (312)
T ss_dssp EEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEE
T ss_pred eeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEE
Confidence 46799999999999986 46788999999654321 223456788888888 89999999999999999999
Q ss_pred EEEe-CCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeec-CCCceEEe
Q 047954 342 VYKF-AGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLD-DNEMVLVS 419 (582)
Q Consensus 342 v~e~-~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~-~~~~~kl~ 419 (582)
|||| +.+++|.+++.... .+++..++.++.||+.||+|||+.+ |+||||||+||+++ .++.+||+
T Consensus 116 v~e~~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~-------i~H~dlkp~Nil~~~~~~~~kl~ 182 (312)
T 2iwi_A 116 VLERPLPAQDLFDYITEKG------PLGEGPSRCFFGQVVAAIQHCHSRG-------VVHRDIKDENILIDLRRGCAKLI 182 (312)
T ss_dssp EEECCSSEEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHHT-------EECCCCSGGGEEEETTTTEEEEC
T ss_pred EEEecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC-------eeecCCChhhEEEeCCCCeEEEE
Confidence 9999 78999999997532 4889999999999999999999998 99999999999999 88999999
Q ss_pred eccccccccCc--ccccccccccCCCCCCCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhc
Q 047954 420 DYGFSSLVAQP--IAAQRMISYKSPEYQSSKKI-SRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREE 496 (582)
Q Consensus 420 DfG~a~~~~~~--~~~~~~~~y~aPE~~~~~~~-~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~ 496 (582)
|||+++..... ....++..|+|||++.+..+ +.++||||||+++|||++|+.||... .. + ....
T Consensus 183 dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~------~~----~---~~~~ 249 (312)
T 2iwi_A 183 DFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD------QE----I---LEAE 249 (312)
T ss_dssp CCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH------HH----H---HHTC
T ss_pred EcchhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh------HH----H---hhhc
Confidence 99999876543 23346788999998876665 45899999999999999999999531 10 0 0110
Q ss_pred ccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 497 WTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 497 ~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
. . +.. ....++.+++.+||+.||++|||+.|++++.+...
T Consensus 250 ~--~-~~~---------~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~ 289 (312)
T 2iwi_A 250 L--H-FPA---------HVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQT 289 (312)
T ss_dssp C--C-CCT---------TSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC
T ss_pred c--C-Ccc---------cCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcC
Confidence 0 0 000 01125778999999999999999999999877544
No 244
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=2.5e-38 Score=322.28 Aligned_cols=238 Identities=20% Similarity=0.349 Sum_probs=191.6
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCCCcc------hHHHHHHHHHHHhcCC--CCCccccceEEEeCCeeEEEE
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDLKPL------ITEEFRKQLLVIADQK--HPNLLPLLAYYFSNDEKLLVY 343 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~--H~niv~l~~~~~~~~~~~lv~ 343 (582)
.+.||+|+||.||+|.. .+++.||||++...... ..+.+.+|+.++++++ |+||+++++++...+..++||
T Consensus 48 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~ 127 (320)
T 3a99_A 48 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLIL 127 (320)
T ss_dssp EEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEE
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEE
Confidence 46799999999999985 46788999998643211 2245678999999986 599999999999999999999
Q ss_pred EeCCC-CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeec-CCCceEEeec
Q 047954 344 KFAGN-GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLD-DNEMVLVSDY 421 (582)
Q Consensus 344 e~~~~-gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~-~~~~~kl~Df 421 (582)
||+.+ ++|.+++.... .+++..++.++.||+.||+|||+.+ |+||||||+|||++ +++.+||+||
T Consensus 128 e~~~~~~~L~~~l~~~~------~l~~~~~~~i~~qi~~~L~~LH~~~-------ivH~Dlkp~NIll~~~~~~~kL~Df 194 (320)
T 3a99_A 128 ERPEPVQDLFDFITERG------ALQEELARSFFWQVLEAVRHCHNCG-------VLHRDIKDENILIDLNRGELKLIDF 194 (320)
T ss_dssp ECCSSEEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCSGGGEEEETTTTEEEECCC
T ss_pred EcCCCCccHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHCC-------cEeCCCCHHHEEEeCCCCCEEEeeC
Confidence 99976 89999987532 4788999999999999999999998 99999999999999 7889999999
Q ss_pred cccccccCcc--cccccccccCCCCCCCCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhccc
Q 047954 422 GFSSLVAQPI--AAQRMISYKSPEYQSSKKI-SRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWT 498 (582)
Q Consensus 422 G~a~~~~~~~--~~~~~~~y~aPE~~~~~~~-~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (582)
|+++...... ...++..|+|||++.+..+ +.++|||||||++|||+||+.||.... .......
T Consensus 195 g~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-------------~~~~~~~- 260 (320)
T 3a99_A 195 GSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------------EIIRGQV- 260 (320)
T ss_dssp TTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------------HHHHCCC-
T ss_pred ccccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-------------hhhcccc-
Confidence 9998765432 3357889999998876665 688999999999999999999995310 0011110
Q ss_pred ccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcc
Q 047954 499 AEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIK 548 (582)
Q Consensus 499 ~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 548 (582)
..... ...++.+++.+||+.||++|||++|++++.+...
T Consensus 261 --~~~~~---------~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~ 299 (320)
T 3a99_A 261 --FFRQR---------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 299 (320)
T ss_dssp --CCSSC---------CCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSS
T ss_pred --ccccc---------CCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcC
Confidence 00111 1125778999999999999999999999877543
No 245
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.3e-36 Score=304.42 Aligned_cols=228 Identities=12% Similarity=0.053 Sum_probs=177.0
Q ss_pred cccccccCceEEEEEEEcC-CceEEEEEecCCCc---chHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALLEG-RAPVVVKRLRDLKP---LITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 348 (582)
.+.||+|+||.||+|.... ++.||||++..... ...+.+.+|+.++.+++||||+++++++...+..++||||+++
T Consensus 36 ~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g 115 (286)
T 3uqc_A 36 LIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRG 115 (286)
T ss_dssp EEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCE
T ss_pred EEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCC
Confidence 4679999999999999764 78999999975432 2347789999999999999999999999999999999999999
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccccccc
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~ 428 (582)
++|.+++... ....+...|+.|++.||+|||+++ |+||||||+|||++.++.+||+++|
T Consensus 116 ~~L~~~l~~~--------~~~~~~~~i~~ql~~aL~~lH~~g-------ivH~Dikp~NIll~~~g~~kl~~~~------ 174 (286)
T 3uqc_A 116 GSLQEVADTS--------PSPVGAIRAMQSLAAAADAAHRAG-------VALSIDHPSRVRVSIDGDVVLAYPA------ 174 (286)
T ss_dssp EEHHHHHTTC--------CCHHHHHHHHHHHHHHHHHHHHTT-------CCCCCCSGGGEEEETTSCEEECSCC------
T ss_pred CCHHHHHhcC--------CChHHHHHHHHHHHHHHHHHHHCC-------CccCCCCcccEEEcCCCCEEEEecc------
Confidence 9999999532 234467889999999999999998 9999999999999999999998554
Q ss_pred CcccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccchhhhh
Q 047954 429 QPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISV 508 (582)
Q Consensus 429 ~~~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 508 (582)
|++ .++.++|||||||++|||+||+.||...............+ . .....+.
T Consensus 175 ----------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~----~----~~~~~~~--- 226 (286)
T 3uqc_A 175 ----------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDT----A----GQPIEPA--- 226 (286)
T ss_dssp ----------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCT----T----SCBCCHH---
T ss_pred ----------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHh----c----cCCCChh---
Confidence 343 36899999999999999999999997543221000000000 0 0000000
Q ss_pred hhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccCC
Q 047954 509 QRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVTE 551 (582)
Q Consensus 509 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 551 (582)
........++.+++.+||+.||++| |+.|+++.|+.+....
T Consensus 227 -~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 227 -DIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp -HHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred -hcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence 0001112357889999999999999 9999999999987654
No 246
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.3e-36 Score=306.53 Aligned_cols=232 Identities=20% Similarity=0.342 Sum_probs=178.3
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCCCcchHHHHHHHHHHH-hcCCCCCccccceEEEe----CCeeEEEEEeC
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDLKPLITEEFRKQLLVI-ADQKHPNLLPLLAYYFS----NDEKLLVYKFA 346 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l-~~l~H~niv~l~~~~~~----~~~~~lv~e~~ 346 (582)
.+.||+|+||.||+|.. .+++.||+|++.. ...+.+|+.++ +..+||||+++++++.. ....++||||+
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 97 (299)
T 3m2w_A 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL 97 (299)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCC
T ss_pred CcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeec
Confidence 36799999999999996 4678999999854 24577888887 55699999999999987 66789999999
Q ss_pred CCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecC---CCceEEeeccc
Q 047954 347 GNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDD---NEMVLVSDYGF 423 (582)
Q Consensus 347 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~---~~~~kl~DfG~ 423 (582)
++|+|.+++..... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||+
T Consensus 98 ~~~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~-------i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~ 166 (299)
T 3m2w_A 98 DGGELFSRIQDRGD----QAFTEREASEIMKSIGEAIQYLHSIN-------IAHRDVKPENLLYTSKRPNAILKLTDFGF 166 (299)
T ss_dssp CSCBHHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHHHTT-------EECCCCSGGGEEESSSSTTCCEEECCCTT
T ss_pred CCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHhCC-------cccCCCCHHHEEEecCCCCCcEEEecccc
Confidence 99999999986432 25899999999999999999999998 999999999999998 78899999999
Q ss_pred cccccCcccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccc
Q 047954 424 SSLVAQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFD 503 (582)
Q Consensus 424 a~~~~~~~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 503 (582)
++... +..++.++|||||||++|||+||+.||.......... .....+..
T Consensus 167 a~~~~------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~------------~~~~~~~~ 216 (299)
T 3m2w_A 167 AKETT------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP------------GMKTRIRM 216 (299)
T ss_dssp CEECT------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------C------------CSCCSSCT
T ss_pred ccccc------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhH------------HHHHHHhh
Confidence 86542 2457889999999999999999999996432110000 00000000
Q ss_pred hhhhhh-hchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHhhcccC
Q 047954 504 SEISVQ-RSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELEIIKVT 550 (582)
Q Consensus 504 ~~~~~~-~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 550 (582)
...... ........++.+++.+||+.||++|||+.|+++|.+.....
T Consensus 217 ~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~ 264 (299)
T 3m2w_A 217 GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 264 (299)
T ss_dssp TCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGG
T ss_pred ccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcccc
Confidence 000000 00011123678899999999999999999999998865543
No 247
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.1e-37 Score=328.69 Aligned_cols=241 Identities=15% Similarity=0.109 Sum_probs=176.5
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCCCc---chHHHHHHHHHHHhcCCC-CCccccceE---------------
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDLKP---LITEEFRKQLLVIADQKH-PNLLPLLAY--------------- 332 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~H-~niv~l~~~--------------- 332 (582)
.+.||+|+||.||+|.. .+++.||||+++.... ...+.+.+|+.++..++| +|...+..+
T Consensus 83 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (413)
T 3dzo_A 83 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 162 (413)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC-
T ss_pred ecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCC
Confidence 46799999999999995 4688999999873322 225679999999999987 332211111
Q ss_pred ------EEe-----CCeeEEEEEeCCCCChHHHHhcCCC-CCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCccee
Q 047954 333 ------YFS-----NDEKLLVYKFAGNGNLFNRIHGGKS-SKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400 (582)
Q Consensus 333 ------~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~-~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH 400 (582)
+.. ....+++|+++ +++|.+++..... ......+++..++.++.||+.||+|||+++ |||
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-------iiH 234 (413)
T 3dzo_A 163 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG-------LVH 234 (413)
T ss_dssp --------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT-------EEC
T ss_pred CccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC-------ccc
Confidence 111 12356777765 6899988842100 011235888999999999999999999998 999
Q ss_pred cCCCCCCeeecCCCceEEeeccccccccCcc-cccccccccCCCCC----------CCCCCCcchhHHHHHHHHHHHHhC
Q 047954 401 GNLKSTNILLDDNEMVLVSDYGFSSLVAQPI-AAQRMISYKSPEYQ----------SSKKISRKSDVWSFGCLLLELLTG 469 (582)
Q Consensus 401 ~Dlkp~NILl~~~~~~kl~DfG~a~~~~~~~-~~~~~~~y~aPE~~----------~~~~~~~k~DVwS~Gvvl~elltG 469 (582)
|||||+|||++.++.+||+|||+++...... ...+ +.|+|||++ ....++.++|||||||++|||+||
T Consensus 235 rDiKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg 313 (413)
T 3dzo_A 235 TYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCA 313 (413)
T ss_dssp SCCCGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHS
T ss_pred CCcccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHC
Confidence 9999999999999999999999998765442 2335 889999998 556688999999999999999999
Q ss_pred CCCCCCCCCCCCccchHHHHHHHHhhcccccccchhhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHHHHHHHh
Q 047954 470 RISTHSAPQGINGADLCSWVLRAVREEWTAEIFDSEISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVVSELE 545 (582)
Q Consensus 470 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 545 (582)
+.||...... .. ...++.. ... ...++.+++.+||+.||++||++.|++++.+
T Consensus 314 ~~Pf~~~~~~----~~------------~~~~~~~----~~~---~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~ 366 (413)
T 3dzo_A 314 DLPNTDDAAL----GG------------SEWIFRS----CKN---IPQPVRALLEGFLRYPKEDRLLPLQAMETPE 366 (413)
T ss_dssp SCCCCTTGGG----SC------------SGGGGSS----CCC---CCHHHHHHHHHHTCSSGGGSCCHHHHTTSHH
T ss_pred CCCCCCcchh----hh------------HHHHHhh----ccc---CCHHHHHHHHHHccCChhhCcCHHHHHhCHH
Confidence 9999653211 10 0001110 000 1135788999999999999999999877643
No 248
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.3e-36 Score=340.65 Aligned_cols=233 Identities=18% Similarity=0.223 Sum_probs=186.4
Q ss_pred cccccccCceEEEEEEEc--CCceEEEEEecCCC-cchHHHHHHHHHHHhcCCCCCccccceEEEeCCe-----eEEEEE
Q 047954 273 AEGLGKGIFGNSYKALLE--GRAPVVVKRLRDLK-PLITEEFRKQLLVIADQKHPNLLPLLAYYFSNDE-----KLLVYK 344 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~-----~~lv~e 344 (582)
.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.++.+++|||||++++++...+. .++|||
T Consensus 85 ~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E 164 (681)
T 2pzi_A 85 KGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVME 164 (681)
T ss_dssp EEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEE
T ss_pred EEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEE
Confidence 467999999999999975 57889999986433 3445678999999999999999999999988765 699999
Q ss_pred eCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccc
Q 047954 345 FAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS 424 (582)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a 424 (582)
|+++++|.+++.. .+++..++.|+.||+.||.|||+++ ||||||||+|||++.+ .+||+|||++
T Consensus 165 ~~~g~~L~~~~~~--------~l~~~~~~~~~~qi~~aL~~lH~~g-------iiHrDlkp~NIll~~~-~~kl~DFG~a 228 (681)
T 2pzi_A 165 YVGGQSLKRSKGQ--------KLPVAEAIAYLLEILPALSYLHSIG-------LVYNDLKPENIMLTEE-QLKLIDLGAV 228 (681)
T ss_dssp CCCCEECC----C--------CCCHHHHHHHHHHHHHHHHHHHHTT-------EECCCCSGGGEEECSS-CEEECCCTTC
T ss_pred eCCCCcHHHHHhC--------CCCHHHHHHHHHHHHHHHHHHHHCC-------CeecccChHHeEEeCC-cEEEEecccc
Confidence 9999999887642 4889999999999999999999998 9999999999999986 8999999999
Q ss_pred ccccCcccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHHHHhhcccccccch
Q 047954 425 SLVAQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLRAVREEWTAEIFDS 504 (582)
Q Consensus 425 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 504 (582)
+.........+|+.|+|||++.+. ++.++|||||||++|||++|..||...... .+...
T Consensus 229 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~--------------------~~~~~ 287 (681)
T 2pzi_A 229 SRINSFGYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVD--------------------GLPED 287 (681)
T ss_dssp EETTCCSCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECS--------------------SCCTT
T ss_pred hhcccCCccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccc--------------------ccccc
Confidence 888776666789999999988764 489999999999999999999887532110 00000
Q ss_pred hhhhhhchHHHHHHHHHHHHHcccCCCCCCCChHH-HHHHHhhc
Q 047954 505 EISVQRSAAHGMLKLLQVAIQCCNKSPEKRPEMAE-VVSELEII 547 (582)
Q Consensus 505 ~~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~e-vl~~L~~i 547 (582)
.........+.+++.+||+.||++||+..+ +...|..+
T Consensus 288 -----~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 288 -----DPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp -----CHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred -----ccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 000111235778999999999999996544 44555544
No 249
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.5e-37 Score=340.03 Aligned_cols=253 Identities=22% Similarity=0.268 Sum_probs=189.9
Q ss_pred cccccccCceEEEEEEE-cCCceEEEEEecCC-CcchHHHHHHHHHHHhcCCCCCccccceEEEe------CCeeEEEEE
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAPVVVKRLRDL-KPLITEEFRKQLLVIADQKHPNLLPLLAYYFS------NDEKLLVYK 344 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~------~~~~~lv~e 344 (582)
.+.||+|+||.||+|.. .++..||||+++.. .....+.+.+|++++++++||||+++++++.. .+..++|||
T Consensus 19 ~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmE 98 (676)
T 3qa8_A 19 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAME 98 (676)
T ss_dssp CCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEE
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEEE
Confidence 46899999999999986 46788999998653 33445778999999999999999999998765 567899999
Q ss_pred eCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCc---eEEeec
Q 047954 345 FAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEM---VLVSDY 421 (582)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~---~kl~Df 421 (582)
|+++|+|.+++..... ...+++..++.++.|++.||+|||+.+ |+||||||+|||++.++. +||+||
T Consensus 99 y~~ggsL~~~L~~~~~---~~~lse~~i~~I~~QLl~aL~yLHs~g-------IVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 99 YCEGGDLRKYLNQFEN---CCGLKEGPIRTLLSDISSALRYLHENR-------IIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp CCSSCBHHHHHHSSSC---TTCCCSSHHHHHHHHHHHHHHHHHHTT-------BCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred eCCCCCHHHHHHhccc---CCCCCHHHHHHHHHHHHHHHHHHHHCC-------CccCCCCHHHeEeecCCCceeEEEccc
Confidence 9999999999986432 225888899999999999999999998 999999999999997665 999999
Q ss_pred cccccccCcc---cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCCCCccchHHHHHH---HHhh
Q 047954 422 GFSSLVAQPI---AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTHSAPQGINGADLCSWVLR---AVRE 495 (582)
Q Consensus 422 G~a~~~~~~~---~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~~~~~~~~~~~~~~~~~~---~~~~ 495 (582)
|+++...... ...++..|+|||.+.+..++.++|||||||++|||++|+.||..... ...|... ....
T Consensus 169 G~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~------~~~~~~~i~~~~~~ 242 (676)
T 3qa8_A 169 GYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ------PVQWHGKVREKSNE 242 (676)
T ss_dssp CCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH------HHHSSTTCC-----
T ss_pred ccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc------hhhhhhhhhcccch
Confidence 9998765432 33577899999999999999999999999999999999999964210 0000000 0000
Q ss_pred -cccccccc------hhhhh-hhchHHHHHHHHHHHHHcccCCCCCCCChHHHH
Q 047954 496 -EWTAEIFD------SEISV-QRSAAHGMLKLLQVAIQCCNKSPEKRPEMAEVV 541 (582)
Q Consensus 496 -~~~~~~~d------~~~~~-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl 541 (582)
....+... ..... ..........+.+++.+||..||++|||+.|++
T Consensus 243 ~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL 296 (676)
T 3qa8_A 243 HIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP 296 (676)
T ss_dssp -CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred hhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence 00000000 00000 001112334688899999999999999998854
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=2.4e-36 Score=309.73 Aligned_cols=239 Identities=13% Similarity=0.119 Sum_probs=179.3
Q ss_pred cccccccCceEEEEEEEcCCceEEEEEecCCC--------cchHHHHHHHHHHHhcCC---------CCCccccceEE--
Q 047954 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLK--------PLITEEFRKQLLVIADQK---------HPNLLPLLAYY-- 333 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~---------H~niv~l~~~~-- 333 (582)
.+.||+|+||.||+|+. +++.||||++.... ....+.+.+|+.++++++ |||||++.+.+
T Consensus 25 ~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~ 103 (336)
T 2vuw_A 25 CEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCV 103 (336)
T ss_dssp CEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEE
T ss_pred eeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEe
Confidence 57899999999999998 67899999996432 233477889999988885 66666665543
Q ss_pred ---------------Ee-------------CCeeEEEEEeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHH
Q 047954 334 ---------------FS-------------NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEY 385 (582)
Q Consensus 334 ---------------~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~y 385 (582)
.+ .+..++||||+++|++.+.+.. ..+++..++.|+.||+.||+|
T Consensus 104 ~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-------~~~~~~~~~~i~~qi~~aL~~ 176 (336)
T 2vuw_A 104 QGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-------KLSSLATAKSILHQLTASLAV 176 (336)
T ss_dssp ESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-------TCCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-------cCCCHHHHHHHHHHHHHHHHH
Confidence 32 6789999999999987777643 147889999999999999999
Q ss_pred Hh-ccCCCCCCCcceecCCCCCCeeecCCC--------------------ceEEeeccccccccCcccccccccccCCCC
Q 047954 386 LH-HKDKSRTQSAVIHGNLKSTNILLDDNE--------------------MVLVSDYGFSSLVAQPIAAQRMISYKSPEY 444 (582)
Q Consensus 386 LH-~~~~~~~~~~ivH~Dlkp~NILl~~~~--------------------~~kl~DfG~a~~~~~~~~~~~~~~y~aPE~ 444 (582)
|| +.+ |+||||||+|||++.++ .+||+|||+|+..... ...+|+.|+|||+
T Consensus 177 lH~~~~-------ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-~~~gt~~y~aPE~ 248 (336)
T 2vuw_A 177 AEASLR-------FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-IVVFCDVSMDEDL 248 (336)
T ss_dssp HHHHHC-------CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-EEECCCCTTCSGG
T ss_pred HHHhCC-------EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-cEEEeecccChhh
Confidence 99 888 99999999999999887 8999999999877654 3468899999999
Q ss_pred CCCCCCCcchhHHHHHHH-HHHHHhCCCCCCCCCCCCCccchHHHHHHHHh-hcccccccchhhhhhhchHHHHHHHHHH
Q 047954 445 QSSKKISRKSDVWSFGCL-LLELLTGRISTHSAPQGINGADLCSWVLRAVR-EEWTAEIFDSEISVQRSAAHGMLKLLQV 522 (582)
Q Consensus 445 ~~~~~~~~k~DVwS~Gvv-l~elltG~~P~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~l~~l 522 (582)
+.+.. +.++||||+|++ .+++++|..||.. ............ ......... .........++.+|
T Consensus 249 ~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~-------~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~s~~~~dl 315 (336)
T 2vuw_A 249 FTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN-------VLWLHYLTDKMLKQMTFKTKCN-----TPAMKQIKRKIQEF 315 (336)
T ss_dssp GCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH-------HHHHHHHHHHHHHTCCCSSCCC-----SHHHHHHHHHHHHH
T ss_pred hcCCC-ccceehhhhhCCCCcccccccCCCcc-------hhhhhHHHHhhhhhhccCcccc-----hhhhhhcCHHHHHH
Confidence 98766 899999998777 7788889988831 111011111111 100110000 11122344578899
Q ss_pred HHHcccCCCCCCCChHHHH-HHHh
Q 047954 523 AIQCCNKSPEKRPEMAEVV-SELE 545 (582)
Q Consensus 523 ~~~Cl~~dP~~RPs~~evl-~~L~ 545 (582)
+.+||+.| |++|++ +|.+
T Consensus 316 i~~~L~~d-----sa~e~l~~Hp~ 334 (336)
T 2vuw_A 316 HRTMLNFS-----SATDLLCQHSL 334 (336)
T ss_dssp HHHGGGSS-----SHHHHHHHCGG
T ss_pred HHHHhccC-----CHHHHHhcCCC
Confidence 99999976 999999 8765
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96 E-value=3.7e-30 Score=280.90 Aligned_cols=182 Identities=13% Similarity=0.008 Sum_probs=128.1
Q ss_pred ccccccCceEEEEEE-EcCCceEEEEEecCCC----------cchHHHHHHHHHHHhcC-CCCCccccceEEEeCCeeEE
Q 047954 274 EGLGKGIFGNSYKAL-LEGRAPVVVKRLRDLK----------PLITEEFRKQLLVIADQ-KHPNLLPLLAYYFSNDEKLL 341 (582)
Q Consensus 274 ~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~----------~~~~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 341 (582)
...+.|++|.+..++ ...|+.+++|.+.... ....++|.+|+++|+++ .|+||+++++++.+++..||
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yL 319 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWL 319 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEE
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEE
Confidence 357778888777765 4567889999986431 12345799999999999 79999999999999999999
Q ss_pred EEEeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeec
Q 047954 342 VYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDY 421 (582)
Q Consensus 342 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~Df 421 (582)
||||++||+|.+++.... +++.. +|+.||+.||+|+|+++ ||||||||+|||+++++.+||+||
T Consensus 320 VMEyv~G~~L~d~i~~~~------~l~~~---~I~~QIl~AL~ylH~~G-------IIHRDIKPeNILL~~dg~vKL~DF 383 (569)
T 4azs_A 320 VMEKLPGRLLSDMLAAGE------EIDRE---KILGSLLRSLAALEKQG-------FWHDDVRPWNVMVDARQHARLIDF 383 (569)
T ss_dssp EEECCCSEEHHHHHHTTC------CCCHH---HHHHHHHHHHHHHHHTT-------CEESCCCGGGEEECTTSCEEECCC
T ss_pred EEecCCCCcHHHHHHhCC------CCCHH---HHHHHHHHHHHHHHHCC-------ceeccCchHhEEECCCCCEEEeec
Confidence 999999999999997543 34433 58899999999999998 999999999999999999999999
Q ss_pred cccccccCcc----cccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCC
Q 047954 422 GFSSLVAQPI----AAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRIS 472 (582)
Q Consensus 422 G~a~~~~~~~----~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P 472 (582)
|+|+...... ...||+.|||||++.+ .+..++|+||+|++++++.++..+
T Consensus 384 GlAr~~~~~~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 384 GSIVTTPQDCSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp TTEESCC---CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred ccCeeCCCCCccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 9998775432 2347889999999875 467789999999998887665443
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93 E-value=5.8e-27 Score=254.23 Aligned_cols=178 Identities=17% Similarity=0.165 Sum_probs=144.1
Q ss_pred cccccccCceEEEEEEEcCCceEEEEEecCCCcc--------hHHHHHHHHHHHhcCCCCCccccceEEEeCCeeEEEEE
Q 047954 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPL--------ITEEFRKQLLVIADQKHPNLLPLLAYYFSNDEKLLVYK 344 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 344 (582)
.+.||+|+||.||+|.. .+..+++|+....... ..+.+.+|++++++++||||+++..++...+..++|||
T Consensus 341 ~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE 419 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS 419 (540)
T ss_dssp -------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred CCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence 46899999999999954 4566888876432211 13458999999999999999988888888888999999
Q ss_pred eCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeecccc
Q 047954 345 FAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFS 424 (582)
Q Consensus 345 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a 424 (582)
|+++|+|.+++.. ++.++.|+++||+|||+++ |+||||||+|||++. .+||+|||++
T Consensus 420 ~~~ggsL~~~l~~--------------~~~i~~qi~~aL~~LH~~g-------IiHrDiKp~NILl~~--~~kL~DFGla 476 (540)
T 3en9_A 420 YINGKLAKDVIED--------------NLDIAYKIGEIVGKLHKND-------VIHNDLTTSNFIFDK--DLYIIDFGLG 476 (540)
T ss_dssp CCCSEEHHHHSTT--------------CTHHHHHHHHHHHHHHHTT-------EECTTCCTTSEEESS--SEEECCCTTC
T ss_pred CCCCCCHHHHHHH--------------HHHHHHHHHHHHHHHHHCc-------CccCCCCHHHEEECC--eEEEEECccC
Confidence 9999999999863 4578999999999999998 999999999999998 9999999999
Q ss_pred ccccCcc-----------cccccccccCCCCCCC--CCCCcchhHHHHHHHHHHHHhCCCCCC
Q 047954 425 SLVAQPI-----------AAQRMISYKSPEYQSS--KKISRKSDVWSFGCLLLELLTGRISTH 474 (582)
Q Consensus 425 ~~~~~~~-----------~~~~~~~y~aPE~~~~--~~~~~k~DVwS~Gvvl~elltG~~P~~ 474 (582)
+...... ...+|+.|||||++.. ..|+.++|+||..+-.++.+.++.+|.
T Consensus 477 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 477 KISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp EECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred EECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 9876532 3347889999999876 568888999999999999988877663
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.88 E-value=3.1e-23 Score=206.44 Aligned_cols=140 Identities=16% Similarity=0.205 Sum_probs=114.2
Q ss_pred cccccccCceEEEEEEEcCCceEEEEEecCCCc------------------chHHHHHHHHHHHhcCCCCCccccceEEE
Q 047954 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKP------------------LITEEFRKQLLVIADQKHPNLLPLLAYYF 334 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~e~~~l~~l~H~niv~l~~~~~ 334 (582)
.+.||+|+||.||+|...+++.||+|.++.... .....+.+|+.++++++ | +++.+++.
T Consensus 95 ~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~ 171 (282)
T 1zar_A 95 GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYA 171 (282)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEE
T ss_pred cCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEe
Confidence 478999999999999997789999999964321 13457899999999999 5 77777654
Q ss_pred eCCeeEEEEEeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCC
Q 047954 335 SNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNE 414 (582)
Q Consensus 335 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~ 414 (582)
. +..++||||+++|+|.+ +.. .....++.|++.||.|||+.+ |+||||||+|||++ ++
T Consensus 172 ~-~~~~lvmE~~~g~~L~~-l~~------------~~~~~i~~qi~~~l~~lH~~g-------iiHrDlkp~NILl~-~~ 229 (282)
T 1zar_A 172 W-EGNAVLMELIDAKELYR-VRV------------ENPDEVLDMILEEVAKFYHRG-------IVHGDLSQYNVLVS-EE 229 (282)
T ss_dssp E-ETTEEEEECCCCEEGGG-CCC------------SCHHHHHHHHHHHHHHHHHTT-------EECSCCSTTSEEEE-TT
T ss_pred c-cceEEEEEecCCCcHHH-cch------------hhHHHHHHHHHHHHHHHHHCC-------CEeCCCCHHHEEEE-CC
Confidence 4 55699999999999988 421 124469999999999999998 99999999999999 99
Q ss_pred ceEEeeccccccccCcccccccccccCCCCCC
Q 047954 415 MVLVSDYGFSSLVAQPIAAQRMISYKSPEYQS 446 (582)
Q Consensus 415 ~~kl~DfG~a~~~~~~~~~~~~~~y~aPE~~~ 446 (582)
.+||+|||+|+.. ..|+|||++.
T Consensus 230 ~vkl~DFG~a~~~---------~~~~a~e~l~ 252 (282)
T 1zar_A 230 GIWIIDFPQSVEV---------GEEGWREILE 252 (282)
T ss_dssp EEEECCCTTCEET---------TSTTHHHHHH
T ss_pred cEEEEECCCCeEC---------CCCCHHHHHH
Confidence 9999999998644 2367888764
No 254
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.82 E-value=1.1e-20 Score=214.53 Aligned_cols=121 Identities=31% Similarity=0.515 Sum_probs=111.8
Q ss_pred cCCCCCCcEEEccCCccccccC-CCCCCCCCCEEeCCCCcccccccccccCCCcCCeeecccCcccCCCCCC--CCCCCC
Q 047954 42 FADIPELIVINFKNNIISGNFM-NFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQLQNNNLTGPVPEF--NQSSLK 118 (582)
Q Consensus 42 ~~~l~~L~~l~l~~n~~~g~~~-~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~l~~N~l~g~ip~~--~~~~l~ 118 (582)
++.+++|+.|||++|+|+|.+| .++++++|+.|+|++|+|+|.||.++++|++|+.|||++|+|+|.||.. .+++|+
T Consensus 628 ~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~ 707 (768)
T 3rgz_A 628 FDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLT 707 (768)
T ss_dssp CSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCS
T ss_pred hhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCC
Confidence 3446789999999999999998 5899999999999999999999999999999999999999999999985 789999
Q ss_pred EEEeecCcccccCCCCCcccccccccccCCCCCCCCCCCCCCCCC
Q 047954 119 VFNVSNNNLSGSIPKTQTLQLFRSYSYSNNPYLCGPPSLNNCSST 163 (582)
Q Consensus 119 ~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~l~~~~~~~~~~~~ 163 (582)
+||||+|+|+|.||..+.+..+...+|.||+++||+|.. .|...
T Consensus 708 ~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~~ 751 (768)
T 3rgz_A 708 EIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCDPS 751 (768)
T ss_dssp EEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC-CCCSC
T ss_pred EEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc-CCCCC
Confidence 999999999999999999999999999999999998754 77643
No 255
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.80 E-value=7.5e-20 Score=185.04 Aligned_cols=143 Identities=25% Similarity=0.422 Sum_probs=127.4
Q ss_pred CCCC--cceeeeCCCC--CeEEEEEeCCCccee--ccCccccCCCCCCcEEEccC-CccccccC-CCCCCCCCCEEeCCC
Q 047954 7 FPSQ--WYGIQCDINS--AHVTGIVLEDMRLNG--EIKSDAFADIPELIVINFKN-NIISGNFM-NFSSNHKLKDIDLSG 78 (582)
Q Consensus 7 ~~~~--w~gv~c~~~~--~~~~~l~l~~~~l~g--~ip~~~~~~l~~L~~l~l~~-n~~~g~~~-~~~~~~~l~~l~l~~ 78 (582)
.||. |.||+|+... ++|+.|+|++|+++| .+|+ .++.+++|++|+|++ |.++|.+| .+.++++|++|+|++
T Consensus 32 ~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~-~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~ 110 (313)
T 1ogq_A 32 DCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPS-SLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITH 110 (313)
T ss_dssp CTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCG-GGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEE
T ss_pred CCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccCh-hHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcC
Confidence 5687 9999997533 799999999999999 8976 589999999999994 99999998 588999999999999
Q ss_pred CcccccccccccCCCcCCeeecccCcccCCCCCC--CCCCCCEEEeecCcccccCCCC-Cccc-ccccccccCCCC
Q 047954 79 NKFYGEISRSLLSLKFLESLQLQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKT-QTLQ-LFRSYSYSNNPY 150 (582)
Q Consensus 79 N~l~g~ip~~~~~l~~l~~l~l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~-~~~~-~~~~~~~~~n~~ 150 (582)
|+++|.+|..+.++++|++|+|++|.++|.+|.. .+++|+.|+|++|.++|.+|.. ..+. .+..+++++|..
T Consensus 111 n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l 186 (313)
T 1ogq_A 111 TNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRL 186 (313)
T ss_dssp ECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEE
T ss_pred CeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCee
Confidence 9999999999999999999999999999999974 7899999999999999999965 3344 677788888754
No 256
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.79 E-value=1.9e-19 Score=176.78 Aligned_cols=134 Identities=18% Similarity=0.171 Sum_probs=103.7
Q ss_pred cccccccCceEEEEEEE-cCCce--EEEEEecCCCcc------------------------hHHHHHHHHHHHhcCCCCC
Q 047954 273 AEGLGKGIFGNSYKALL-EGRAP--VVVKRLRDLKPL------------------------ITEEFRKQLLVIADQKHPN 325 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~e~~~l~~l~H~n 325 (582)
.+.||+|+||.||+|.. .++.. ||||+++..... ....+.+|+.++.++.|++
T Consensus 52 ~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 131 (258)
T 1zth_A 52 GGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAG 131 (258)
T ss_dssp EEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCC
Confidence 46799999999999997 68888 999987543111 1136789999999998886
Q ss_pred c--cccceEEEeCCeeEEEEEeCCC-C----ChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHh-ccCCCCCCCc
Q 047954 326 L--LPLLAYYFSNDEKLLVYKFAGN-G----NLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLH-HKDKSRTQSA 397 (582)
Q Consensus 326 i--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~~~~~ 397 (582)
+ ..++++ ...++||||+.+ | +|.++... .++.....++.|++.||.||| +.+
T Consensus 132 i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~---------~~~~~~~~i~~qi~~~l~~lH~~~g------- 191 (258)
T 1zth_A 132 VSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE---------LKELDVEGIFNDVVENVKRLYQEAE------- 191 (258)
T ss_dssp CCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG---------GGGSCHHHHHHHHHHHHHHHHHTSC-------
T ss_pred CCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc---------cChHHHHHHHHHHHHHHHHHHHHCC-------
Confidence 5 333332 356899999942 4 66665421 234567789999999999999 887
Q ss_pred ceecCCCCCCeeecCCCceEEeecccccccc
Q 047954 398 VIHGNLKSTNILLDDNEMVLVSDYGFSSLVA 428 (582)
Q Consensus 398 ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~ 428 (582)
||||||||+|||++. .++|+|||+|....
T Consensus 192 ivHrDlkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 192 LVHADLSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp EECSSCSTTSEEESS--SEEECCCTTCEETT
T ss_pred EEeCCCCHHHEEEcC--cEEEEECcccccCC
Confidence 999999999999998 99999999997653
No 257
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.74 E-value=1e-18 Score=198.27 Aligned_cols=138 Identities=22% Similarity=0.314 Sum_probs=116.9
Q ss_pred ceeeeCCCCCeEEEEEeCCCcceeccCccccCCCCCCcEEEc-cCCccccc-----------------------------
Q 047954 12 YGIQCDINSAHVTGIVLEDMRLNGEIKSDAFADIPELIVINF-KNNIISGN----------------------------- 61 (582)
Q Consensus 12 ~gv~c~~~~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l-~~n~~~g~----------------------------- 61 (582)
.||+|+. .++|+.|+|++|+|+|.||+ .+++|++|+.|+| ++|.++|.
T Consensus 315 ~GV~C~~-~~~V~~L~Ls~~~L~G~ip~-~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l 392 (876)
T 4ecn_A 315 PGVDLDN-NGRVTGLSLAGFGAKGRVPD-AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFL 392 (876)
T ss_dssp TTEEECT-TSCEEEEECTTTCCEEEECG-GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHT
T ss_pred CceEecC-CCCEEEEECccCCCCCcCch-HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhh
Confidence 9999984 68999999999999999986 4999999999999 88887776
Q ss_pred -----------------------------------------------cC-CCCCCCCCCEEeCCCCcccc----------
Q 047954 62 -----------------------------------------------FM-NFSSNHKLKDIDLSGNKFYG---------- 83 (582)
Q Consensus 62 -----------------------------------------------~~-~~~~~~~l~~l~l~~N~l~g---------- 83 (582)
|| .++++++|+.|+|++|+|+|
T Consensus 393 ~~~~~~~~s~l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~ 472 (876)
T 4ecn_A 393 DYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDA 472 (876)
T ss_dssp CCCGGGGSCHHHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCT
T ss_pred ccCcchhhhHHHHHHhhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCccccccccc
Confidence 54 46778899999999999998
Q ss_pred -------ccccccc--CCCcCCeeecccCcccCCCCCC--CCCCCCEEEeecCc-ccc-cCCCC-Ccc-------ccccc
Q 047954 84 -------EISRSLL--SLKFLESLQLQNNNLTGPVPEF--NQSSLKVFNVSNNN-LSG-SIPKT-QTL-------QLFRS 142 (582)
Q Consensus 84 -------~ip~~~~--~l~~l~~l~l~~N~l~g~ip~~--~~~~l~~l~ls~N~-l~g-~ip~~-~~~-------~~~~~ 142 (582)
.||.+++ +|++|++|+|++|+++|.+|.. .+++|+.|+|++|+ |+| .+|.. ..+ +.+..
T Consensus 473 s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~ 552 (876)
T 4ecn_A 473 NSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQI 552 (876)
T ss_dssp TSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCE
T ss_pred ccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccE
Confidence 4999988 9999999999999999999974 78899999999998 888 88853 222 36777
Q ss_pred ccccCCCCC
Q 047954 143 YSYSNNPYL 151 (582)
Q Consensus 143 ~~~~~n~~l 151 (582)
+++++|...
T Consensus 553 L~Ls~N~L~ 561 (876)
T 4ecn_A 553 FYMGYNNLE 561 (876)
T ss_dssp EECCSSCCC
T ss_pred EEeeCCcCC
Confidence 888888654
No 258
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.73 E-value=1.9e-18 Score=191.72 Aligned_cols=142 Identities=22% Similarity=0.321 Sum_probs=125.0
Q ss_pred CCCCc---ceeeeCCCCCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCc--------------------------
Q 047954 7 FPSQW---YGIQCDINSAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNI-------------------------- 57 (582)
Q Consensus 7 ~~~~w---~gv~c~~~~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~-------------------------- 57 (582)
.+|.| .||+|+. .++|+.|+|++++++|.+|+ .+++|++|++|+|++|.
T Consensus 65 ~~c~w~~~~GV~C~~-~~~V~~L~L~~~~l~g~lp~-~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~ 142 (636)
T 4eco_A 65 ELDMWGAQPGVSLNS-NGRVTGLSLEGFGASGRVPD-AIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMR 142 (636)
T ss_dssp CGGGTTCCTTEEECT-TCCEEEEECTTSCCEEEECG-GGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHH
T ss_pred CcccccCCCCeEEcC-CCCEEEEEecCcccCCcCCh-HHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHH
Confidence 35789 9999974 48999999999999999986 59999999999999984
Q ss_pred ----------------------------------------------------cccccC-CCCCCCCCCEEeCCCCccccc
Q 047954 58 ----------------------------------------------------ISGNFM-NFSSNHKLKDIDLSGNKFYGE 84 (582)
Q Consensus 58 ----------------------------------------------------~~g~~~-~~~~~~~l~~l~l~~N~l~g~ 84 (582)
|+| || .++++++|++|+|++|.|+|.
T Consensus 143 l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~ 221 (636)
T 4eco_A 143 MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAE 221 (636)
T ss_dssp THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGG
T ss_pred hhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccc
Confidence 446 55 488899999999999999997
Q ss_pred -----------------cccccc--CCCcCCeeecccCcccCCCCCC--CCCCCCEEEeecCc-ccc-cCCCCC-cc---
Q 047954 85 -----------------ISRSLL--SLKFLESLQLQNNNLTGPVPEF--NQSSLKVFNVSNNN-LSG-SIPKTQ-TL--- 137 (582)
Q Consensus 85 -----------------ip~~~~--~l~~l~~l~l~~N~l~g~ip~~--~~~~l~~l~ls~N~-l~g-~ip~~~-~~--- 137 (582)
||.+++ ++++|++|+|++|+++|.+|.. .+++|+.|+|++|+ |+| .+|... .+
T Consensus 222 ~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~ 301 (636)
T 4eco_A 222 NICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADA 301 (636)
T ss_dssp GBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHS
T ss_pred cccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhcc
Confidence 999999 9999999999999999999984 78999999999998 999 898652 23
Q ss_pred ---cccccccccCCCCC
Q 047954 138 ---QLFRSYSYSNNPYL 151 (582)
Q Consensus 138 ---~~~~~~~~~~n~~l 151 (582)
..+..+++++|...
T Consensus 302 ~~l~~L~~L~L~~n~l~ 318 (636)
T 4eco_A 302 PVGEKIQIIYIGYNNLK 318 (636)
T ss_dssp GGGGTCCEEECCSSCCS
T ss_pred ccCCCCCEEECCCCcCC
Confidence 78888899988655
No 259
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.71 E-value=4e-17 Score=156.18 Aligned_cols=151 Identities=21% Similarity=0.337 Sum_probs=130.5
Q ss_pred CCCCCCCCcceeeeCCCC---------CeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccC-CCCCCCCCC
Q 047954 3 CFKDFPSQWYGIQCDINS---------AHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFM-NFSSNHKLK 72 (582)
Q Consensus 3 ~~~~~~~~w~gv~c~~~~---------~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~-~~~~~~~l~ 72 (582)
|-.+=.|.|..+.|+.+. ..++.|+|++|++++..|...+..+++|+.|+|++|.+++..+ .+.++++|+
T Consensus 5 CP~~C~C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~ 84 (220)
T 2v70_A 5 CPEKCRCEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVN 84 (220)
T ss_dssp CCTTCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCC
T ss_pred CCCCCEECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCC
Confidence 433333689999996421 2467899999999998777778999999999999999999887 689999999
Q ss_pred EEeCCCCcccccccccccCCCcCCeeecccCcccCCCCCC--CCCCCCEEEeecCcccccCCCC-CcccccccccccCCC
Q 047954 73 DIDLSGNKFYGEISRSLLSLKFLESLQLQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKT-QTLQLFRSYSYSNNP 149 (582)
Q Consensus 73 ~l~l~~N~l~g~ip~~~~~l~~l~~l~l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~ 149 (582)
.|+|++|++++..|..+.++++|++|+|++|++++..|.. .+++|+.|+|++|++++..|.. ..+..+..+++++|+
T Consensus 85 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 164 (220)
T 2v70_A 85 EILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANP 164 (220)
T ss_dssp EEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCC
T ss_pred EEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcC
Confidence 9999999999988989999999999999999999988874 6899999999999999987855 457788899999998
Q ss_pred CCCC
Q 047954 150 YLCG 153 (582)
Q Consensus 150 ~l~~ 153 (582)
..|.
T Consensus 165 l~c~ 168 (220)
T 2v70_A 165 FNCN 168 (220)
T ss_dssp EECS
T ss_pred CcCC
Confidence 8764
No 260
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.70 E-value=1.9e-17 Score=167.26 Aligned_cols=137 Identities=30% Similarity=0.521 Sum_probs=98.2
Q ss_pred CeEEEEEeCCCcceeccCccccCCCC-CCcEEEccCCccccccC------------------------CCCCCCCCCEEe
Q 047954 21 AHVTGIVLEDMRLNGEIKSDAFADIP-ELIVINFKNNIISGNFM------------------------NFSSNHKLKDID 75 (582)
Q Consensus 21 ~~~~~l~l~~~~l~g~ip~~~~~~l~-~L~~l~l~~n~~~g~~~------------------------~~~~~~~l~~l~ 75 (582)
.+++.|+|++|+++|.+|.. ++.++ .|+.|+|++|.++|.+| .+..+++|+.|+
T Consensus 149 ~~L~~L~L~~N~l~~~~p~~-l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 227 (313)
T 1ogq_A 149 PNLVGITFDGNRISGAIPDS-YGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIH 227 (313)
T ss_dssp TTCCEEECCSSCCEEECCGG-GGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEE
T ss_pred CCCCeEECcCCcccCcCCHH-HhhhhhcCcEEECcCCeeeccCChHHhCCcccEEECcCCcccCcCCHHHhcCCCCCEEE
Confidence 44556666666666666543 45554 55566665555555443 244556666666
Q ss_pred CCCCcccccccccccCCCcCCeeecccCcccCCCCCC--CCCCCCEEEeecCcccccCCCCCcccccccccccCCCCCCC
Q 047954 76 LSGNKFYGEISRSLLSLKFLESLQLQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKTQTLQLFRSYSYSNNPYLCG 153 (582)
Q Consensus 76 l~~N~l~g~ip~~~~~l~~l~~l~l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~l~~ 153 (582)
|++|.++|.+|. +..+++|++|+|++|+++|.+|.. .+++|+.|+|++|+++|.+|....+..+..+++.+|+.+||
T Consensus 228 L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 228 LAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp CCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEES
T ss_pred CCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccC
Confidence 666666666665 666777888888888888888874 67899999999999999999888888999999999999999
Q ss_pred CCCCCCC
Q 047954 154 PPSLNNC 160 (582)
Q Consensus 154 ~~~~~~~ 160 (582)
.|.. .|
T Consensus 307 ~p~~-~C 312 (313)
T 1ogq_A 307 SPLP-AC 312 (313)
T ss_dssp TTSS-CC
T ss_pred CCCC-CC
Confidence 7643 35
No 261
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.70 E-value=2.2e-17 Score=187.32 Aligned_cols=141 Identities=26% Similarity=0.318 Sum_probs=87.0
Q ss_pred CCCCcceeeeCCCCCeEEEEEeCCCcceec---cCc----------------------cccCCCCCCcEEEccCCccccc
Q 047954 7 FPSQWYGIQCDINSAHVTGIVLEDMRLNGE---IKS----------------------DAFADIPELIVINFKNNIISGN 61 (582)
Q Consensus 7 ~~~~w~gv~c~~~~~~~~~l~l~~~~l~g~---ip~----------------------~~~~~l~~L~~l~l~~n~~~g~ 61 (582)
.+|.|.||+|+ .++|+.|+|++++++|. +|+ +.++.+++|++|+|++|.++|.
T Consensus 38 ~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~ 115 (768)
T 3rgz_A 38 NPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGP 115 (768)
T ss_dssp CGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEE
T ss_pred CCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCcccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCc
Confidence 46899999998 68999999999999998 764 2355566666666666666666
Q ss_pred cC---CCCCCCCCCEEeCCCCcccccccccc-cCCCcCCeeecccCcccCCCCC-----CCCCCCCEEEeecCcccccCC
Q 047954 62 FM---NFSSNHKLKDIDLSGNKFYGEISRSL-LSLKFLESLQLQNNNLTGPVPE-----FNQSSLKVFNVSNNNLSGSIP 132 (582)
Q Consensus 62 ~~---~~~~~~~l~~l~l~~N~l~g~ip~~~-~~l~~l~~l~l~~N~l~g~ip~-----~~~~~l~~l~ls~N~l~g~ip 132 (582)
+| .++++++|++|||++|.++|.+|..+ +++++|++|||++|+++|.+|. ..+++|+.|++++|.++|.+|
T Consensus 116 ~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 195 (768)
T 3rgz_A 116 VTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVD 195 (768)
T ss_dssp GGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCB
T ss_pred CCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCC
Confidence 54 35556666666666666666666554 5555555555555555554442 134444444444444444444
Q ss_pred CCCcccccccccccCCCC
Q 047954 133 KTQTLQLFRSYSYSNNPY 150 (582)
Q Consensus 133 ~~~~~~~~~~~~~~~n~~ 150 (582)
. ..+..+..+++++|..
T Consensus 196 ~-~~l~~L~~L~Ls~n~l 212 (768)
T 3rgz_A 196 V-SRCVNLEFLDVSSNNF 212 (768)
T ss_dssp C-TTCTTCCEEECCSSCC
T ss_pred c-ccCCcCCEEECcCCcC
Confidence 3 2344445555555543
No 262
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.70 E-value=8.5e-17 Score=154.89 Aligned_cols=145 Identities=19% Similarity=0.212 Sum_probs=123.6
Q ss_pred CCCCcceeeeCCC---------CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCC-CCCCCCCCEEeC
Q 047954 7 FPSQWYGIQCDIN---------SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMN-FSSNHKLKDIDL 76 (582)
Q Consensus 7 ~~~~w~gv~c~~~---------~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~-~~~~~~l~~l~l 76 (582)
..|+|.+|.|+.. .+.++.|+|++|++++..| ..+..+++|+.|+|++|.|++..+. +..+++|+.|+|
T Consensus 17 ~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~L 95 (229)
T 3e6j_A 17 CSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEP-GVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDL 95 (229)
T ss_dssp CEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCT-TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCH-HHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEEC
Confidence 4589999999642 2468899999999998765 4689999999999999999766654 688999999999
Q ss_pred CCCcccccccccccCCCcCCeeecccCcccCCCCCC--CCCCCCEEEeecCcccccCCCC-CcccccccccccCCCCCCC
Q 047954 77 SGNKFYGEISRSLLSLKFLESLQLQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKT-QTLQLFRSYSYSNNPYLCG 153 (582)
Q Consensus 77 ~~N~l~g~ip~~~~~l~~l~~l~l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~l~~ 153 (582)
++|+|++..|..+..+++|++|+|++|+|+ .||.. .+++|+.|+|++|+|++..+.. ..+..+..+.+.+|+..|.
T Consensus 96 s~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 96 GTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred CCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 999999877777899999999999999999 78874 7899999999999999655432 4577888899999988764
No 263
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.68 E-value=2.2e-16 Score=149.43 Aligned_cols=146 Identities=20% Similarity=0.250 Sum_probs=123.6
Q ss_pred CCcceeeeCCC---------CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCC-CCCCCCCCEEeCCC
Q 047954 9 SQWYGIQCDIN---------SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMN-FSSNHKLKDIDLSG 78 (582)
Q Consensus 9 ~~w~gv~c~~~---------~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~-~~~~~~l~~l~l~~ 78 (582)
|.|.+|.|+.. ..+++.|+|++|++++ +|+..++.+++|++|+|++|.+++..+. +..+++|++|+|++
T Consensus 7 C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 7 CSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKS-LPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCC-CCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCc-CChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 78999999642 2358899999999995 5566689999999999999999977665 67899999999999
Q ss_pred CcccccccccccCCCcCCeeecccCcccCCCCCC--CCCCCCEEEeecCcccccCCCC-CcccccccccccCCCCCCCCC
Q 047954 79 NKFYGEISRSLLSLKFLESLQLQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKT-QTLQLFRSYSYSNNPYLCGPP 155 (582)
Q Consensus 79 N~l~g~ip~~~~~l~~l~~l~l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~l~~~~ 155 (582)
|++++..+..+.++++|++|+|++|++++..|.. .+++|+.|+|++|.+++..+.. ..+..+..+++++|+..|..+
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 165 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCC
Confidence 9999777777899999999999999999766652 6899999999999999755542 457788999999998876543
No 264
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.68 E-value=6.3e-17 Score=151.34 Aligned_cols=148 Identities=22% Similarity=0.362 Sum_probs=113.3
Q ss_pred CCCcceeeeCCC---------CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccC-CCCCCCCCCEEeCC
Q 047954 8 PSQWYGIQCDIN---------SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFM-NFSSNHKLKDIDLS 77 (582)
Q Consensus 8 ~~~w~gv~c~~~---------~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~-~~~~~~~l~~l~l~ 77 (582)
.|.|..|.|+.+ ...++.|+|++|++++..+...++.+++|++|+|++|.+++.+| .+.++++|+.|+|+
T Consensus 7 ~C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 7 HCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp EEETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred EECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 368999999642 13678899999999876654457889999999999999998876 57888899999999
Q ss_pred CCcccccccccccCCCcCCeeecccCcccCCCCCC--CCCCCCEEEeecCcccccCCCCCcccccccccccCCCCCCCCC
Q 047954 78 GNKFYGEISRSLLSLKFLESLQLQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKTQTLQLFRSYSYSNNPYLCGPP 155 (582)
Q Consensus 78 ~N~l~g~ip~~~~~l~~l~~l~l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~l~~~~ 155 (582)
+|+|++..|..+.++++|++|+|++|+|++.+|.. .+++|+.|+|++|.|+|..+.......+....+.++...|+.|
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCC
Confidence 99999888888889999999999999999888864 6788999999999998876632111122333444555556544
No 265
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.67 E-value=2.9e-16 Score=150.09 Aligned_cols=151 Identities=23% Similarity=0.290 Sum_probs=126.7
Q ss_pred CCCCCCCCCcceeeeCCC---------CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccC-CCCCCCCC
Q 047954 2 HCFKDFPSQWYGIQCDIN---------SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFM-NFSSNHKL 71 (582)
Q Consensus 2 ~~~~~~~~~w~gv~c~~~---------~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~-~~~~~~~l 71 (582)
.|-.+-.|.|..|.|... ...++.|+|++|++++. |+..+..+++|+.|+|++|.+++..| .+.++++|
T Consensus 4 ~CP~~C~C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i-~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L 82 (220)
T 2v9t_B 4 HCPAACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVI-PPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSL 82 (220)
T ss_dssp CSCTTSEEETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEE-CTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSC
T ss_pred CCCCCCEECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCc-CHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCC
Confidence 455444468999999642 13689999999999975 45568999999999999999999876 58899999
Q ss_pred CEEeCCCCcccccccccccCCCcCCeeecccCcccCCCCCC--CCCCCCEEEeecCcccccCCCC-CcccccccccccCC
Q 047954 72 KDIDLSGNKFYGEISRSLLSLKFLESLQLQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKT-QTLQLFRSYSYSNN 148 (582)
Q Consensus 72 ~~l~l~~N~l~g~ip~~~~~l~~l~~l~l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n 148 (582)
++|+|++|+|++..+..+..+++|++|+|++|++++..|.. .+++|+.|+|++|.|++..|.. ..+..+..+++++|
T Consensus 83 ~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 162 (220)
T 2v9t_B 83 NSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQN 162 (220)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCC
Confidence 99999999999555556789999999999999999987764 6899999999999999876643 45778888999999
Q ss_pred CCCCC
Q 047954 149 PYLCG 153 (582)
Q Consensus 149 ~~l~~ 153 (582)
++.|.
T Consensus 163 ~~~c~ 167 (220)
T 2v9t_B 163 PFICD 167 (220)
T ss_dssp CEECS
T ss_pred CcCCC
Confidence 98763
No 266
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.64 E-value=6.5e-17 Score=165.28 Aligned_cols=137 Identities=12% Similarity=0.055 Sum_probs=96.5
Q ss_pred ccccccccCceEEEEEEEcCCceEEEEEecCCCc--------------chHHH--------HHHHHHHHhcCCCCCcccc
Q 047954 272 PAEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKP--------------LITEE--------FRKQLLVIADQKHPNLLPL 329 (582)
Q Consensus 272 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------------~~~~~--------~~~e~~~l~~l~H~niv~l 329 (582)
....||+|+||.||+|...+|+.||||+++.... ..... ..+|...|.++.+..+.-.
T Consensus 99 I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp 178 (397)
T 4gyi_A 99 VGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVP 178 (397)
T ss_dssp EEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCC
T ss_pred ecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 4578999999999999999999999998753210 01111 2345666666644433222
Q ss_pred ceEEEeCCeeEEEEEeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCee
Q 047954 330 LAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNIL 409 (582)
Q Consensus 330 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NIL 409 (582)
.-+.. ...+|||||+.+++|..+.. . .....++.||+.+|.|||..+ ||||||||.|||
T Consensus 179 ~p~~~--~~~~LVME~i~G~~L~~l~~----------~--~~~~~l~~qll~~l~~lH~~g-------IVHrDLKp~NIL 237 (397)
T 4gyi_A 179 EPIAQ--SRHTIVMSLVDALPMRQVSS----------V--PDPASLYADLIALILRLAKHG-------LIHGDFNEFNIL 237 (397)
T ss_dssp CEEEE--ETTEEEEECCSCEEGGGCCC----------C--SCHHHHHHHHHHHHHHHHHTT-------EECSCCSTTSEE
T ss_pred eeeec--cCceEEEEecCCccHhhhcc----------c--HHHHHHHHHHHHHHHHHHHCC-------CcCCCCCHHHEE
Confidence 11211 22379999999988865431 1 223567899999999999998 999999999999
Q ss_pred ecCCC----------ceEEeeccccccccC
Q 047954 410 LDDNE----------MVLVSDYGFSSLVAQ 429 (582)
Q Consensus 410 l~~~~----------~~kl~DfG~a~~~~~ 429 (582)
+++++ .+.|+||+-+-....
T Consensus 238 l~~dgd~~d~~~~~~~~~iID~~Q~V~~~h 267 (397)
T 4gyi_A 238 IREEKDAEDPSSITLTPIIIXFPQMVSMDH 267 (397)
T ss_dssp EEEEECSSCTTSEEEEEEECCCTTCEETTS
T ss_pred EeCCCCcccccccccceEEEEeCCcccCCC
Confidence 98776 388999997755433
No 267
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.63 E-value=2e-16 Score=160.86 Aligned_cols=141 Identities=16% Similarity=0.189 Sum_probs=122.5
Q ss_pred CCCCCcceeeeCC--------CCCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccC-CCCCCCCCCEEeC
Q 047954 6 DFPSQWYGIQCDI--------NSAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFM-NFSSNHKLKDIDL 76 (582)
Q Consensus 6 ~~~~~w~gv~c~~--------~~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~-~~~~~~~l~~l~l 76 (582)
+..|.|.|+.|+. ..++|+.|+|++|+++ .||+. ++.+++|++|+|++|.++ .+| .+..+++|++|+|
T Consensus 58 ~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~-l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~L 134 (328)
T 4fcg_A 58 PQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQ-AFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTL 134 (328)
T ss_dssp TTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSC-GGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEE
T ss_pred ccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChh-hhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEEC
Confidence 4568999999942 3478999999999998 88765 778999999999999999 776 5889999999999
Q ss_pred CCCcccccccccccCCCcCCeeecccCcccCCCCCCC-----------CCCCCEEEeecCcccccCCCC-Cccccccccc
Q 047954 77 SGNKFYGEISRSLLSLKFLESLQLQNNNLTGPVPEFN-----------QSSLKVFNVSNNNLSGSIPKT-QTLQLFRSYS 144 (582)
Q Consensus 77 ~~N~l~g~ip~~~~~l~~l~~l~l~~N~l~g~ip~~~-----------~~~l~~l~ls~N~l~g~ip~~-~~~~~~~~~~ 144 (582)
++|.++ .||..++++++|++|+|++|++.|.+|... +++|+.|+|++|.++ .+|.. ..+..+..++
T Consensus 135 s~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~ 212 (328)
T 4fcg_A 135 ARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLK 212 (328)
T ss_dssp ESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEE
T ss_pred CCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEE
Confidence 999999 999999999999999999999999999852 889999999999998 78864 4567788888
Q ss_pred ccCCCCC
Q 047954 145 YSNNPYL 151 (582)
Q Consensus 145 ~~~n~~l 151 (582)
+++|...
T Consensus 213 L~~N~l~ 219 (328)
T 4fcg_A 213 IRNSPLS 219 (328)
T ss_dssp EESSCCC
T ss_pred ccCCCCC
Confidence 8888654
No 268
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.60 E-value=3.8e-15 Score=139.12 Aligned_cols=126 Identities=21% Similarity=0.319 Sum_probs=111.4
Q ss_pred EEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCC--CCCCCCCCEEeCCCCcccccccccccCCCcCCeeecc
Q 047954 24 TGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMN--FSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQLQ 101 (582)
Q Consensus 24 ~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~--~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~l~ 101 (582)
+.+++++|+| +.||.. +. .+|++|+|++|.+++..+. +..+++|++|+|++|++++.+|..+.++++|++|+|+
T Consensus 11 ~~l~~s~~~l-~~ip~~-~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 11 TTVDCTGRGL-KEIPRD-IP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TEEECTTSCC-SSCCSC-CC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CEEEcCCCCc-CcCccC-CC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 5789999999 578764 32 4899999999999998875 8899999999999999999999999999999999999
Q ss_pred cCcccCCCCCC--CCCCCCEEEeecCcccccCCCC-CcccccccccccCCCCCCC
Q 047954 102 NNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKT-QTLQLFRSYSYSNNPYLCG 153 (582)
Q Consensus 102 ~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~l~~ 153 (582)
+|+|++..|.. .+++|+.|+|++|++++.+|.. ..+..+..+++++|++.|.
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 99999988863 7899999999999999998865 4577888999999987654
No 269
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.59 E-value=3.1e-15 Score=137.71 Aligned_cols=123 Identities=22% Similarity=0.259 Sum_probs=90.7
Q ss_pred CCcceeeeCCC---------CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCC-CCCCCCCCEEeCCC
Q 047954 9 SQWYGIQCDIN---------SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMN-FSSNHKLKDIDLSG 78 (582)
Q Consensus 9 ~~w~gv~c~~~---------~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~-~~~~~~l~~l~l~~ 78 (582)
|+|.+|.|+.+ ...++.|+|++|++++ +|+..++.+++|++|+|++|.+++..+. +..+++|+.|+|++
T Consensus 7 C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 7 CSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQS-LPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp EETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCC-CCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred eCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccE-eCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 68999999642 1457778888888875 4455577788888888888888766654 56778888888888
Q ss_pred CcccccccccccCCCcCCeeecccCcccCCCCCC--CCCCCCEEEeecCcccccCC
Q 047954 79 NKFYGEISRSLLSLKFLESLQLQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIP 132 (582)
Q Consensus 79 N~l~g~ip~~~~~l~~l~~l~l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip 132 (582)
|++++..|..+.++++|++|+|++|+|++..+.. .+++|+.|+|++|.++|..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 8888766666777888888888888887544432 46778888888888877665
No 270
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.58 E-value=1.1e-14 Score=143.74 Aligned_cols=127 Identities=19% Similarity=0.221 Sum_probs=74.5
Q ss_pred CeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCC-CCCCCCCCEEeCCCCcccccccccccCCCcCCeee
Q 047954 21 AHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMN-FSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQ 99 (582)
Q Consensus 21 ~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~-~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~ 99 (582)
+.++.|+|++|++++ ++ .++.+++|++|+|++|.+++..+. +..+++|+.|+|++|++++..|..++++++|++|+
T Consensus 63 ~~L~~L~l~~n~l~~-~~--~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 63 PNVRYLALGGNKLHD-IS--ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp TTCCEEECTTSCCCC-CG--GGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEECCCCCCCC-ch--hhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 456666666666665 22 356666666666666666655543 45566666666666666655555566666666666
Q ss_pred cccCcccCCCCCC--CCCCCCEEEeecCcccccCCCC-CcccccccccccCCCC
Q 047954 100 LQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKT-QTLQLFRSYSYSNNPY 150 (582)
Q Consensus 100 l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~ 150 (582)
|++|++++..|.. .+++|+.|+|++|++++..|.. ..+..+..+++++|..
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 193 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQL 193 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcC
Confidence 6666666544432 4566666666666666544432 3345555556665543
No 271
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.56 E-value=1.5e-14 Score=141.18 Aligned_cols=130 Identities=19% Similarity=0.202 Sum_probs=108.7
Q ss_pred CeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCC-CCCCCCCCEEeCCCCcccccccccccCCCcCCeee
Q 047954 21 AHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMN-FSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQ 99 (582)
Q Consensus 21 ~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~-~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~ 99 (582)
..++.|+|++|++++..| ..++.+++|++|+|++|.+++..+. +..+++|+.|+|++|++++..|..+..+++|++|+
T Consensus 35 ~~l~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 113 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSD-ATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLY 113 (251)
T ss_dssp TTCCEEECTTSCCCCCCT-TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEEccCCCcCccCH-hHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEE
Confidence 457789999999998654 4588999999999999999998775 78899999999999999987778889999999999
Q ss_pred cccCcccCCCCCC--CCCCCCEEEeecCcccccCCC-CCcccccccccccCCCCC
Q 047954 100 LQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPK-TQTLQLFRSYSYSNNPYL 151 (582)
Q Consensus 100 l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~-~~~~~~~~~~~~~~n~~l 151 (582)
|++|++++..|.. .+++|+.|+|++|++++..|. ...+..+..+++++|...
T Consensus 114 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 168 (251)
T 3m19_A 114 LGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ 168 (251)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred cCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCC
Confidence 9999999665543 578999999999999876553 345778888899888654
No 272
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.55 E-value=2.2e-14 Score=139.97 Aligned_cols=133 Identities=21% Similarity=0.278 Sum_probs=115.1
Q ss_pred CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCC-CCCCCCCCEEeCCCCcccccccccccCCCcCCee
Q 047954 20 SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMN-FSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESL 98 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~-~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l 98 (582)
..+++.|+|++|++++.. +..+..+++|++|+|++|.+++..+. +..+++|+.|+|++|++++..|..+.++++|++|
T Consensus 58 l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 136 (251)
T 3m19_A 58 LTKLTWLNLDYNQLQTLS-AGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKEL 136 (251)
T ss_dssp CTTCCEEECTTSCCCCCC-TTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cccCCEEECCCCcCCccC-HhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEE
Confidence 467899999999999865 45689999999999999999987764 6889999999999999997777778999999999
Q ss_pred ecccCcccCCCCCC--CCCCCCEEEeecCcccccCCCC-CcccccccccccCCCCCCC
Q 047954 99 QLQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKT-QTLQLFRSYSYSNNPYLCG 153 (582)
Q Consensus 99 ~l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~l~~ 153 (582)
+|++|+|++..|.. .+++|+.|+|++|.|++..|.. ..+..+..+++++|+..|.
T Consensus 137 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 137 RLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred ECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 99999999766642 6899999999999999766643 4577888999999988764
No 273
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.53 E-value=5.3e-15 Score=132.03 Aligned_cols=110 Identities=23% Similarity=0.283 Sum_probs=99.3
Q ss_pred CeEEEEEeCCCcce-eccCccccCCCCCCcEEEccCCccccccCCCCCCCCCCEEeCCCCcccccccccccCCCcCCeee
Q 047954 21 AHVTGIVLEDMRLN-GEIKSDAFADIPELIVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQ 99 (582)
Q Consensus 21 ~~~~~l~l~~~~l~-g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~ 99 (582)
++++.|++++|+++ |.+|. .++.+++|+.|+|++|.+++. +.+..+++|++|+|++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~-~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEG-LTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCS-CCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHH-HHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 56899999999999 89976 589999999999999999988 8889999999999999999999999999999999999
Q ss_pred cccCcccCC-CCC--CCCCCCCEEEeecCcccccCC
Q 047954 100 LQNNNLTGP-VPE--FNQSSLKVFNVSNNNLSGSIP 132 (582)
Q Consensus 100 l~~N~l~g~-ip~--~~~~~l~~l~ls~N~l~g~ip 132 (582)
|++|.+++. .|. ..+++|+.|++++|.+++..+
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 130 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLND 130 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTT
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHH
Confidence 999999983 333 278999999999999997654
No 274
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.53 E-value=7.9e-15 Score=149.07 Aligned_cols=133 Identities=12% Similarity=0.154 Sum_probs=105.4
Q ss_pred CCeEEEEEeCCCcceeccCccc--------cCCCCCCcEEEccCCccccccC-CCCCCCCCCEEeCCCCccccccccccc
Q 047954 20 SAHVTGIVLEDMRLNGEIKSDA--------FADIPELIVINFKNNIISGNFM-NFSSNHKLKDIDLSGNKFYGEISRSLL 90 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~~~--------~~~l~~L~~l~l~~n~~~g~~~-~~~~~~~l~~l~l~~N~l~g~ip~~~~ 90 (582)
..++..|+|++|++.|.+|... ++.+++|++|+|++|.++ .+| .+..+++|+.|+|++|.+++ +|..++
T Consensus 149 l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~ 226 (328)
T 4fcg_A 149 LNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIH 226 (328)
T ss_dssp CTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGG
T ss_pred CcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-Cchhhc
Confidence 4568888898888888887642 224888888888888888 555 57788888888888888885 777788
Q ss_pred CCCcCCeeecccCcccCCCCCC--CCCCCCEEEeecCcccccCCCC-CcccccccccccCCCCCCCC
Q 047954 91 SLKFLESLQLQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKT-QTLQLFRSYSYSNNPYLCGP 154 (582)
Q Consensus 91 ~l~~l~~l~l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~l~~~ 154 (582)
++++|++|+|++|++.|.+|.. .+++|+.|+|++|++.|.+|.. ..+..+..+++++|+.+...
T Consensus 227 ~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~i 293 (328)
T 4fcg_A 227 HLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRL 293 (328)
T ss_dssp GCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCC
T ss_pred cCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhc
Confidence 8888888888888888888874 6788888888888888888865 45677788888888765543
No 275
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.53 E-value=7.9e-15 Score=133.72 Aligned_cols=129 Identities=22% Similarity=0.254 Sum_probs=111.2
Q ss_pred CCeEEEEEeCCCcce-eccCccccCCCCCCcEEEccCCccccccCCCCCCCCCCEEeCCCCcccccccccccCCCcCCee
Q 047954 20 SAHVTGIVLEDMRLN-GEIKSDAFADIPELIVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESL 98 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~-g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l 98 (582)
...++.|+|++|+++ |.+|. .+..+++|++|+|++|.+++. +.+..+++|+.|+|++|.+++.+|..+.++++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~-~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEG-LTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSS-CCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHH-HHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 367999999999999 89975 478999999999999999987 889999999999999999999999999999999999
Q ss_pred ecccCcccCCC--CCC-CCCCCCEEEeecCcccccCC----CCCcccccccccccCCCC
Q 047954 99 QLQNNNLTGPV--PEF-NQSSLKVFNVSNNNLSGSIP----KTQTLQLFRSYSYSNNPY 150 (582)
Q Consensus 99 ~l~~N~l~g~i--p~~-~~~~l~~l~ls~N~l~g~ip----~~~~~~~~~~~~~~~n~~ 150 (582)
+|++|++++.- +.. .+++|+.|++++|.+++..+ ....++.+..+++.+|..
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~ 159 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRED 159 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTS
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCCh
Confidence 99999999732 232 78999999999999997655 234567778888887754
No 276
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.51 E-value=2.9e-14 Score=155.23 Aligned_cols=141 Identities=20% Similarity=0.186 Sum_probs=121.5
Q ss_pred CCCcceeeeCCC-----------CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccC-CCCCCCCCCEEe
Q 047954 8 PSQWYGIQCDIN-----------SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFM-NFSSNHKLKDID 75 (582)
Q Consensus 8 ~~~w~gv~c~~~-----------~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~-~~~~~~~l~~l~ 75 (582)
+|.|.|+ |+.. ...++.|+|++|++++..| ..++.+++|++|+|++|.+++..| .+.++++|++||
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 80 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGH-GDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLD 80 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECS-STTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccCh-hhhhcCCcccEEECCCCCcCccChhhccccccCCEEE
Confidence 5889999 8632 2468999999999998765 458999999999999999999886 589999999999
Q ss_pred CCCCcccccccccccCCCcCCeeecccCcccC-CCCCC--CCCCCCEEEeecCcccccCCCC--CcccccccccccCCCC
Q 047954 76 LSGNKFYGEISRSLLSLKFLESLQLQNNNLTG-PVPEF--NQSSLKVFNVSNNNLSGSIPKT--QTLQLFRSYSYSNNPY 150 (582)
Q Consensus 76 l~~N~l~g~ip~~~~~l~~l~~l~l~~N~l~g-~ip~~--~~~~l~~l~ls~N~l~g~ip~~--~~~~~~~~~~~~~n~~ 150 (582)
|++|.+++..|..++++++|++|+|++|.+++ .+|.. .+++|+.|++++|.+.+.+|.. ..+..+..+++++|..
T Consensus 81 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l 160 (549)
T 2z81_A 81 LSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSL 160 (549)
T ss_dssp CTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred CCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcc
Confidence 99999999888889999999999999999997 46653 7899999999999988888743 4577788888888864
No 277
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.50 E-value=1.9e-14 Score=137.39 Aligned_cols=112 Identities=19% Similarity=0.203 Sum_probs=102.4
Q ss_pred CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCC-CCCCCCCCEEeCCCCcccccccccccCCCcCCee
Q 047954 20 SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMN-FSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESL 98 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~-~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l 98 (582)
..+++.|+|++|++++.. +..++.+++|++|+|++|.+++..+. +.++++|+.|+|++|++++..|..+.++++|++|
T Consensus 56 l~~L~~L~L~~N~i~~i~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 134 (220)
T 2v70_A 56 LPQLRKINFSNNKITDIE-EGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLL 134 (220)
T ss_dssp CTTCCEEECCSSCCCEEC-TTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEE
T ss_pred CCCCCEEECCCCcCCEEC-HHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEE
Confidence 467999999999999765 45689999999999999999998875 8889999999999999999999999999999999
Q ss_pred ecccCcccCCCCCC--CCCCCCEEEeecCcccccCC
Q 047954 99 QLQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIP 132 (582)
Q Consensus 99 ~l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip 132 (582)
+|++|++++..|.. .+++|+.|+|++|.+++..+
T Consensus 135 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 135 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp ECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred ECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 99999999988874 68999999999999998765
No 278
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.50 E-value=7.6e-14 Score=130.36 Aligned_cols=124 Identities=19% Similarity=0.235 Sum_probs=83.4
Q ss_pred EEeCCCcceeccCccccCCCCCCcEEEccCCccccccCCCCCCCCCCEEeCCCCcccccccccccCCCcCCeeecccCcc
Q 047954 26 IVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQLQNNNL 105 (582)
Q Consensus 26 l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~l~~N~l 105 (582)
+++++|+++ .||.. + .++|+.|+|++|.++.....+.++++|+.|+|++|.+++..|..|.++++|++|+|++|++
T Consensus 15 l~~~~~~l~-~ip~~-~--~~~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l 90 (193)
T 2wfh_A 15 VRCSNKGLK-VLPKG-I--PRDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90 (193)
T ss_dssp EECTTSCCS-SCCSC-C--CTTCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEcCCCCCC-cCCCC-C--CCCCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCcc
Confidence 344455555 45543 2 2577778888887773333567777788888888888777777777778888888888887
Q ss_pred cCCCCCC--CCCCCCEEEeecCcccccCCC-CCcccccccccccCCCCCCC
Q 047954 106 TGPVPEF--NQSSLKVFNVSNNNLSGSIPK-TQTLQLFRSYSYSNNPYLCG 153 (582)
Q Consensus 106 ~g~ip~~--~~~~l~~l~ls~N~l~g~ip~-~~~~~~~~~~~~~~n~~l~~ 153 (582)
++..|.. .+++|+.|+|++|.+++..+. ...+..+..+++++|+..|.
T Consensus 91 ~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 91 RCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 7766542 567778888888877754332 23466677777777777653
No 279
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.49 E-value=4.8e-14 Score=149.77 Aligned_cols=143 Identities=20% Similarity=0.218 Sum_probs=123.4
Q ss_pred CCCcce--eeeCCCC--------CeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccC--CCCCCCCCCEEe
Q 047954 8 PSQWYG--IQCDINS--------AHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFM--NFSSNHKLKDID 75 (582)
Q Consensus 8 ~~~w~g--v~c~~~~--------~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~--~~~~~~~l~~l~ 75 (582)
.|.|.+ |.|+... .+++.|+|++|++++..| ..++.+++|++|+|++|.+++.++ .+.++++|++|+
T Consensus 7 ~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 7 ECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNE-TSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECT-TTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred eeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCCh-hHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 466655 8896432 568999999999998765 468999999999999999998885 488999999999
Q ss_pred CCCCcccccccccccCCCcCCeeecccCcccCCCCCC----CCCCCCEEEeecCcccccCCCC--CcccccccccccCCC
Q 047954 76 LSGNKFYGEISRSLLSLKFLESLQLQNNNLTGPVPEF----NQSSLKVFNVSNNNLSGSIPKT--QTLQLFRSYSYSNNP 149 (582)
Q Consensus 76 l~~N~l~g~ip~~~~~l~~l~~l~l~~N~l~g~ip~~----~~~~l~~l~ls~N~l~g~ip~~--~~~~~~~~~~~~~n~ 149 (582)
|++|.+++.+|..++++++|++|+|++|+++|.+|.. .+++|+.|+|++|.+++..|.. ..+..+..+++++|.
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 165 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNK 165 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCC
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCc
Confidence 9999999999999999999999999999999976642 6789999999999999988863 467888899999986
Q ss_pred CC
Q 047954 150 YL 151 (582)
Q Consensus 150 ~l 151 (582)
..
T Consensus 166 l~ 167 (455)
T 3v47_A 166 VK 167 (455)
T ss_dssp BS
T ss_pred cc
Confidence 53
No 280
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.49 E-value=2.6e-14 Score=163.70 Aligned_cols=133 Identities=18% Similarity=0.251 Sum_probs=111.2
Q ss_pred CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCcccccc-----C-CCCCCCCCCEEeCCCCcccccccccccCCC
Q 047954 20 SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNF-----M-NFSSNHKLKDIDLSGNKFYGEISRSLLSLK 93 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~-----~-~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~ 93 (582)
.++++.|+|++|++++..+...+..+++|+.|+|++|.+++.. + .+.++++|+.|+|++|+|++.+|..+.+++
T Consensus 425 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 504 (844)
T 3j0a_A 425 VPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLT 504 (844)
T ss_dssp CTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCC
T ss_pred CCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchh
Confidence 4567888888888887655445566888888888888887433 2 367889999999999999999999999999
Q ss_pred cCCeeecccCcccCCCCCCCCCCCCEEEeecCcccccCCCCCcccccccccccCCCCCCCC
Q 047954 94 FLESLQLQNNNLTGPVPEFNQSSLKVFNVSNNNLSGSIPKTQTLQLFRSYSYSNNPYLCGP 154 (582)
Q Consensus 94 ~l~~l~l~~N~l~g~ip~~~~~~l~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~l~~~ 154 (582)
+|+.|+|++|+|++..|....++|+.|+|++|+|+|.+|.. +..+..+++++|++.|..
T Consensus 505 ~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C~c 563 (844)
T 3j0a_A 505 ALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDV--FVSLSVLDITHNKFICEC 563 (844)
T ss_dssp SCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCSCC--CSSCCEEEEEEECCCCSS
T ss_pred hhheeECCCCCCCccChhhhhccccEEECCCCcCCCCChhH--hCCcCEEEecCCCccccc
Confidence 99999999999998666655589999999999999999864 567888999999999853
No 281
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.49 E-value=9.2e-14 Score=147.59 Aligned_cols=134 Identities=22% Similarity=0.234 Sum_probs=117.8
Q ss_pred CeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccC-CCCCCCCCCEEeCCCCcccccccccccCCCcCCeee
Q 047954 21 AHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFM-NFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQ 99 (582)
Q Consensus 21 ~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~-~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~ 99 (582)
..++.|+|++|++++.+|. .++.+++|+.|+|++|.+++..| .+.++++|+.|+|++|.+++..|..+.++++|++|+
T Consensus 275 ~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 353 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKS-VFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLD 353 (455)
T ss_dssp SCCCEEECCSSCCCEECTT-TTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEE
T ss_pred cCceEEEecCccccccchh-hcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEE
Confidence 4689999999999988754 58999999999999999999887 688899999999999999999899999999999999
Q ss_pred cccCcccCCCCCC--CCCCCCEEEeecCcccccCCCC-CcccccccccccCCCCCCCCC
Q 047954 100 LQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKT-QTLQLFRSYSYSNNPYLCGPP 155 (582)
Q Consensus 100 l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~l~~~~ 155 (582)
|++|++++..|.. .+++|+.|+|++|++++..+.. ..+..+..+++++|+..|..+
T Consensus 354 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 354 LSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 9999999988874 7899999999999999744433 467888999999999877654
No 282
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.49 E-value=1.8e-14 Score=159.86 Aligned_cols=130 Identities=15% Similarity=0.210 Sum_probs=116.6
Q ss_pred CCeEEEEEeCCCcceec-----------------cCccccC--CCCCCcEEEccCCccccccC-CCCCCCCCCEEeCCCC
Q 047954 20 SAHVTGIVLEDMRLNGE-----------------IKSDAFA--DIPELIVINFKNNIISGNFM-NFSSNHKLKDIDLSGN 79 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~-----------------ip~~~~~--~l~~L~~l~l~~n~~~g~~~-~~~~~~~l~~l~l~~N 79 (582)
.++++.|+|++|.|+|. ||.. ++ ++++|++|+|++|.++|.+| .+.++++|+.|+|++|
T Consensus 205 l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~-l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n 283 (636)
T 4eco_A 205 LTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTED-LKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACN 283 (636)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSC-CCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTC
T ss_pred ccCCCEEECcCCccccccccccccccccchhcccCchh-hhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCC
Confidence 56799999999999996 8764 88 99999999999999999998 5889999999999999
Q ss_pred c-ccc-cccccccCC------CcCCeeecccCcccCCCCC--C--CCCCCCEEEeecCcccccCCCCCcccccccccccC
Q 047954 80 K-FYG-EISRSLLSL------KFLESLQLQNNNLTGPVPE--F--NQSSLKVFNVSNNNLSGSIPKTQTLQLFRSYSYSN 147 (582)
Q Consensus 80 ~-l~g-~ip~~~~~l------~~l~~l~l~~N~l~g~ip~--~--~~~~l~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~ 147 (582)
+ |+| .+|..++++ ++|++|+|++|+++ .||. . .+++|+.|+|++|.++|.+|....+..+..+++++
T Consensus 284 ~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip~~~~l~~L~~L~L~~ 362 (636)
T 4eco_A 284 RGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLPAFGSEIKLASLNLAY 362 (636)
T ss_dssp TTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECCCCEEEEEESEEECCS
T ss_pred CCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchhhhCCCCCCCEEECCC
Confidence 8 999 999999887 99999999999999 8998 3 78999999999999999999555677888888888
Q ss_pred CCCC
Q 047954 148 NPYL 151 (582)
Q Consensus 148 n~~l 151 (582)
|...
T Consensus 363 N~l~ 366 (636)
T 4eco_A 363 NQIT 366 (636)
T ss_dssp SEEE
T ss_pred Cccc
Confidence 8543
No 283
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.48 E-value=3.6e-14 Score=152.16 Aligned_cols=126 Identities=20% Similarity=0.085 Sum_probs=90.2
Q ss_pred CeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccC-CCCCCCCCCEEeCCCCccccccccccc-CCCcCCee
Q 047954 21 AHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFM-NFSSNHKLKDIDLSGNKFYGEISRSLL-SLKFLESL 98 (582)
Q Consensus 21 ~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~-~~~~~~~l~~l~l~~N~l~g~ip~~~~-~l~~l~~l 98 (582)
+.+..|+|++|++++..+ ..+++|+.|+|++|.++|.+| .++++++|+.|+|++|.|+|.+|..+. ++++|+.|
T Consensus 99 ~~L~~L~L~~N~l~~~~~----~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L 174 (487)
T 3oja_A 99 PSIETLHAANNNISRVSC----SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHL 174 (487)
T ss_dssp TTCCEEECCSSCCCCEEE----CCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEE
T ss_pred CCcCEEECcCCcCCCCCc----cccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEE
Confidence 456667777777776543 245777788888888877765 466777788888888888877777775 67788888
Q ss_pred ecccCcccCCCCCCCCCCCCEEEeecCcccccCCCCCcccccccccccCCCC
Q 047954 99 QLQNNNLTGPVPEFNQSSLKVFNVSNNNLSGSIPKTQTLQLFRSYSYSNNPY 150 (582)
Q Consensus 99 ~l~~N~l~g~ip~~~~~~l~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~ 150 (582)
+|++|.|++..+...+++|+.|+|++|.|+|..|....+..+..+++++|..
T Consensus 175 ~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l 226 (487)
T 3oja_A 175 NLQYNFIYDVKGQVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKL 226 (487)
T ss_dssp ECTTSCCCEEECCCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCC
T ss_pred ecCCCccccccccccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcC
Confidence 8888887776444567778888888888877655555566677777777754
No 284
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.48 E-value=4.4e-14 Score=153.26 Aligned_cols=127 Identities=22% Similarity=0.357 Sum_probs=101.9
Q ss_pred CCCC-----Cccee-eeCCCCCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCCCCCCCCCCEEeCCCC
Q 047954 6 DFPS-----QWYGI-QCDINSAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMNFSSNHKLKDIDLSGN 79 (582)
Q Consensus 6 ~~~~-----~w~gv-~c~~~~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N 79 (582)
..|| .|.|+ .|. .++++.|+|++|+|+| ||... +++|+.|+|++|.|+ .+| ..+++|+.|+|++|
T Consensus 40 ~~~~~~~~~~~~~l~~C~--~~~L~~L~Ls~n~L~~-lp~~l---~~~L~~L~Ls~N~l~-~ip--~~l~~L~~L~Ls~N 110 (571)
T 3cvr_A 40 ALPGENRNEAVSLLKECL--INQFSELQLNRLNLSS-LPDNL---PPQITVLEITQNALI-SLP--ELPASLEYLDACDN 110 (571)
T ss_dssp CCTTCCHHHHHHHHHHHH--HTTCSEEECCSSCCSC-CCSCC---CTTCSEEECCSSCCS-CCC--CCCTTCCEEECCSS
T ss_pred CCccccccchhhhccccc--cCCccEEEeCCCCCCc-cCHhH---cCCCCEEECcCCCCc-ccc--cccCCCCEEEccCC
Confidence 4567 69999 786 4579999999999998 87653 378999999999998 567 55788999999999
Q ss_pred cccccccccccCCCcCCeeecccCcccCCCCCCCCCCCCEEEeecCcccccCCCCCcccccccccccCCCC
Q 047954 80 KFYGEISRSLLSLKFLESLQLQNNNLTGPVPEFNQSSLKVFNVSNNNLSGSIPKTQTLQLFRSYSYSNNPY 150 (582)
Q Consensus 80 ~l~g~ip~~~~~l~~l~~l~l~~N~l~g~ip~~~~~~l~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~ 150 (582)
+|++ ||. +.+ +|++|+|++|+|++ ||. .+++|+.|+|++|.|++ ||. .+..+..+++++|..
T Consensus 111 ~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~-~l~~L~~L~Ls~N~l~~-lp~--~l~~L~~L~Ls~N~L 172 (571)
T 3cvr_A 111 RLST-LPE-LPA--SLKHLDVDNNQLTM-LPE-LPALLEYINADNNQLTM-LPE--LPTSLEVLSVRNNQL 172 (571)
T ss_dssp CCSC-CCC-CCT--TCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCSC-CCC--CCTTCCEEECCSSCC
T ss_pred CCCC-cch-hhc--CCCEEECCCCcCCC-CCC-cCccccEEeCCCCccCc-CCC--cCCCcCEEECCCCCC
Confidence 9987 887 665 88888888888887 777 77888888888888886 775 456677777777753
No 285
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.47 E-value=2.9e-13 Score=133.41 Aligned_cols=126 Identities=19% Similarity=0.244 Sum_probs=72.3
Q ss_pred EEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCC-CCCCCCCCEEeCCCCcccccccccccCCCcCCeeecc
Q 047954 23 VTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMN-FSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQLQ 101 (582)
Q Consensus 23 ~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~-~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~l~ 101 (582)
++.|+|++|++++ +|+..+..+++|++|+|++|.+++..+. +..+++|++|+|++|.+++..+..+.++++|++|+|+
T Consensus 39 l~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 117 (270)
T 2o6q_A 39 TKKLDLQSNKLSS-LPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLD 117 (270)
T ss_dssp CSEEECCSSCCSC-CCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECC
T ss_pred CCEEECcCCCCCe-eCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECC
Confidence 4556666666653 3333466666666666666666644443 3556666666666666665545555666666666666
Q ss_pred cCcccCCCCCC--CCCCCCEEEeecCcccccCCC-CCcccccccccccCCC
Q 047954 102 NNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPK-TQTLQLFRSYSYSNNP 149 (582)
Q Consensus 102 ~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~-~~~~~~~~~~~~~~n~ 149 (582)
+|++++..|.. .+++|+.|+|++|.+++..+. ...+..+..+++++|.
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 168 (270)
T 2o6q_A 118 RNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQ 168 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCc
Confidence 66666544432 456666666666666543332 1334555555555554
No 286
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.47 E-value=3.6e-13 Score=134.24 Aligned_cols=127 Identities=20% Similarity=0.230 Sum_probs=82.5
Q ss_pred CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCCCCCCCCCCEEeCCCCcccccccccccCCCcCCeee
Q 047954 20 SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQ 99 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~ 99 (582)
..+++.|+|++|++++.- + .+.+++|++|+|++|.++.....+..+++|+.|+|++|++++..|..+.++++|++|+
T Consensus 54 l~~L~~L~L~~n~l~~~~-~--~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~ 130 (290)
T 1p9a_G 54 YTRLTQLNLDRAELTKLQ-V--DGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELY 130 (290)
T ss_dssp CTTCCEEECTTSCCCEEE-C--CSCCTTCCEEECCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCccc-C--CCCCCcCCEEECCCCcCCcCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEE
Confidence 456777777777777642 2 2567777777777777764333456667777777777777766666677777777777
Q ss_pred cccCcccCCCCCC--CCCCCCEEEeecCcccccCCCC--CcccccccccccCCCC
Q 047954 100 LQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKT--QTLQLFRSYSYSNNPY 150 (582)
Q Consensus 100 l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~--~~~~~~~~~~~~~n~~ 150 (582)
|++|++++..|.. .+++|+.|+|++|+|++ +|.. ..+..+..+++++|..
T Consensus 131 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~L~~N~l 184 (290)
T 1p9a_G 131 LKGNELKTLPPGLLTPTPKLEKLSLANNNLTE-LPAGLLNGLENLDTLLLQENSL 184 (290)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCSC-CCTTTTTTCTTCCEEECCSSCC
T ss_pred CCCCCCCccChhhcccccCCCEEECCCCcCCc-cCHHHhcCcCCCCEEECCCCcC
Confidence 7777777544432 45677777777777764 3332 2355666666666654
No 287
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.46 E-value=2.3e-13 Score=127.11 Aligned_cols=128 Identities=23% Similarity=0.276 Sum_probs=109.0
Q ss_pred CCCCCCCCCcceeeeCCC---------CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccC-CCCCCCCC
Q 047954 2 HCFKDFPSQWYGIQCDIN---------SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFM-NFSSNHKL 71 (582)
Q Consensus 2 ~~~~~~~~~w~gv~c~~~---------~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~-~~~~~~~l 71 (582)
.|-..-.|.|..|.|+.+ ...++.|+|++|+++ .|| ..+..+++|+.|+|++|.+++..+ .|.++++|
T Consensus 3 ~CP~~C~C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip-~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L 80 (193)
T 2wfh_A 3 RCPTECTCLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVP-KELSNYKHLTLIDLSNNRISTLSNQSFSNMTQL 80 (193)
T ss_dssp -CCTTCEEETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCC-GGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred CCCCCCEeCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhH-HHhhcccCCCEEECCCCcCCEeCHhHccCCCCC
Confidence 355444568999999642 246889999999998 787 468999999999999999999886 48999999
Q ss_pred CEEeCCCCcccccccccccCCCcCCeeecccCcccCCCCC-C-CCCCCCEEEeecCcccccC
Q 047954 72 KDIDLSGNKFYGEISRSLLSLKFLESLQLQNNNLTGPVPE-F-NQSSLKVFNVSNNNLSGSI 131 (582)
Q Consensus 72 ~~l~l~~N~l~g~ip~~~~~l~~l~~l~l~~N~l~g~ip~-~-~~~~l~~l~ls~N~l~g~i 131 (582)
+.|+|++|++++..|..|.++++|++|+|++|++++..+. + .+++|+.|+|++|.+.+.-
T Consensus 81 ~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 81 LTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp CEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 9999999999999899999999999999999999965443 2 6889999999999998643
No 288
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.46 E-value=1.1e-13 Score=137.57 Aligned_cols=132 Identities=16% Similarity=0.142 Sum_probs=104.5
Q ss_pred CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCC-CCCCCCCCEEeCCCCcccccccccccCCCcCCee
Q 047954 20 SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMN-FSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESL 98 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~-~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l 98 (582)
..+++.|+|++|.+-+.+++..+..+++|++|+|++|.+++..|. +.++++|+.|+|++|.+++..+..++++++|++|
T Consensus 79 l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 158 (285)
T 1ozn_A 79 LALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHL 158 (285)
T ss_dssp CTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEE
Confidence 467889999999844556556688899999999999999887764 6778889999999999987777778889999999
Q ss_pred ecccCcccCCCCC-C-CCCCCCEEEeecCcccccCCCC-CcccccccccccCCCCC
Q 047954 99 QLQNNNLTGPVPE-F-NQSSLKVFNVSNNNLSGSIPKT-QTLQLFRSYSYSNNPYL 151 (582)
Q Consensus 99 ~l~~N~l~g~ip~-~-~~~~l~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~l 151 (582)
+|++|++++..+. + .+++|+.|+|++|.+++..|.. ..+..+..+++++|...
T Consensus 159 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 214 (285)
T 1ozn_A 159 FLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS 214 (285)
T ss_dssp ECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred ECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCC
Confidence 9999998865543 2 5788899999999988877754 34667788888888543
No 289
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.46 E-value=1.9e-13 Score=151.18 Aligned_cols=129 Identities=22% Similarity=0.213 Sum_probs=111.6
Q ss_pred CeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCC-CCCCCCCCEEeCCCCcccccccccccCCCcCCeee
Q 047954 21 AHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMN-FSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQ 99 (582)
Q Consensus 21 ~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~-~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~ 99 (582)
..++.|+|++|++++ ||+..|..+++|++|+|++|.+++..+. |.++++|++|+|++|+|++..|..|.+|++|++|+
T Consensus 52 ~~~~~LdLs~N~i~~-l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~ 130 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRH-LGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 130 (635)
T ss_dssp TTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEE
T ss_pred cCCCEEEeeCCCCCC-CCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEE
Confidence 468899999999996 5566799999999999999999998774 88999999999999999987778899999999999
Q ss_pred cccCcccCCCCC--CCCCCCCEEEeecCcccc-cCCCC-CcccccccccccCCCC
Q 047954 100 LQNNNLTGPVPE--FNQSSLKVFNVSNNNLSG-SIPKT-QTLQLFRSYSYSNNPY 150 (582)
Q Consensus 100 l~~N~l~g~ip~--~~~~~l~~l~ls~N~l~g-~ip~~-~~~~~~~~~~~~~n~~ 150 (582)
|++|++++..|. ..+++|+.|+|++|.+++ .+|.. ..+..+..+++++|..
T Consensus 131 Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l 185 (635)
T 4g8a_A 131 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 185 (635)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCC
T ss_pred CCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccc
Confidence 999999975554 278999999999999976 56654 3467788888888864
No 290
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.45 E-value=4.4e-13 Score=132.16 Aligned_cols=131 Identities=21% Similarity=0.246 Sum_probs=105.1
Q ss_pred CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCC-CCCCCCCCEEeCCCCcccccccccccCCCcCCee
Q 047954 20 SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMN-FSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESL 98 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~-~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l 98 (582)
..+++.|+|++|+++ .+|+..+..+++|++|+|++|.+++..+. +.++++|+.|+|++|++++..|..+.++++|++|
T Consensus 60 l~~L~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 138 (270)
T 2o6q_A 60 LTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYL 138 (270)
T ss_dssp CTTCCEEECCSSCCS-CCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCccC-eeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEE
Confidence 467889999999998 56666678899999999999999887664 5788899999999999998888888899999999
Q ss_pred ecccCcccCCCCCC--CCCCCCEEEeecCcccccCCCC-CcccccccccccCCCCC
Q 047954 99 QLQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKT-QTLQLFRSYSYSNNPYL 151 (582)
Q Consensus 99 ~l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~l 151 (582)
+|++|.+++..+.. .+++|+.|+|++|.+++..|.. ..+..+..+++++|...
T Consensus 139 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 194 (270)
T 2o6q_A 139 SLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK 194 (270)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred ECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCC
Confidence 99999988654432 6788899999999888755432 34677788888888543
No 291
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.45 E-value=2.7e-13 Score=136.16 Aligned_cols=132 Identities=21% Similarity=0.279 Sum_probs=90.5
Q ss_pred CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCC-CCCCCCCCEEeCCCCcccc-cccccccCCCcCCe
Q 047954 20 SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMN-FSSNHKLKDIDLSGNKFYG-EISRSLLSLKFLES 97 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~-~~~~~~l~~l~l~~N~l~g-~ip~~~~~l~~l~~ 97 (582)
...++.|+|++|++++..+...+..+++|++|+|++|.+++.++. +..+++|+.|+|++|.+++ .+|..+..+++|++
T Consensus 100 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 179 (306)
T 2z66_A 100 LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 179 (306)
T ss_dssp CTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCE
T ss_pred CCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCE
Confidence 456777777777777654434567777777777777777777664 5667777777777777776 56777777777777
Q ss_pred eecccCcccCCCCCC--CCCCCCEEEeecCcccccCCCC-CcccccccccccCCCCC
Q 047954 98 LQLQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKT-QTLQLFRSYSYSNNPYL 151 (582)
Q Consensus 98 l~l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~l 151 (582)
|+|++|++++..|.. .+++|+.|+|++|.+++..+.. ..+..+..+++++|...
T Consensus 180 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 236 (306)
T 2z66_A 180 LDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM 236 (306)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCC
T ss_pred EECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCc
Confidence 777777777766653 5677777777777777644422 34556666777777543
No 292
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.45 E-value=1.9e-13 Score=144.63 Aligned_cols=131 Identities=22% Similarity=0.290 Sum_probs=96.9
Q ss_pred eEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCCCCCCCCCCEEeCCCCcccccccccccCCCcCCeeecc
Q 047954 22 HVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQLQ 101 (582)
Q Consensus 22 ~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~l~ 101 (582)
.+..|+|++|+..+.+++..+..+++|+.|+|++|.++ .+|.+..+++|+.|+|++|.+++..|..+.++++|+.|+|+
T Consensus 161 ~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 239 (440)
T 3zyj_A 161 SLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMI 239 (440)
T ss_dssp TCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCCCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECT
T ss_pred ccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-cccccCCCcccCEEECCCCccCccChhhhccCccCCEEECC
Confidence 44455555544445555555667777777777777776 45677777888888888888888888888888888888888
Q ss_pred cCcccCCCCCC--CCCCCCEEEeecCcccccCCCC-CcccccccccccCCCCCCC
Q 047954 102 NNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKT-QTLQLFRSYSYSNNPYLCG 153 (582)
Q Consensus 102 ~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~l~~ 153 (582)
+|++++..|.. .+++|+.|+|++|+|++..+.. ..+..+..+++++|++.|.
T Consensus 240 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~Cd 294 (440)
T 3zyj_A 240 QSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCN 294 (440)
T ss_dssp TCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECS
T ss_pred CCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCC
Confidence 88888776653 6788888888888888654433 3467778888888888775
No 293
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.44 E-value=2.8e-13 Score=143.88 Aligned_cols=132 Identities=22% Similarity=0.270 Sum_probs=97.6
Q ss_pred eEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCCCCCCCCCCEEeCCCCcccccccccccCCCcCCeeecc
Q 047954 22 HVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQLQ 101 (582)
Q Consensus 22 ~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~l~ 101 (582)
.+..|+|++|+.-+.+|+..+..+++|+.|+|++|.+++ +|.+..+.+|+.|+|++|.+++..|..+.++++|+.|+|+
T Consensus 172 ~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 250 (452)
T 3zyi_A 172 SLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MPNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVM 250 (452)
T ss_dssp TCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CCCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECT
T ss_pred cccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cccccccccccEEECcCCcCcccCcccccCccCCCEEEeC
Confidence 344444444444444555456677777777777777775 4677778888888888888888888888888899999999
Q ss_pred cCcccCCCCCC--CCCCCCEEEeecCcccccCCCC-CcccccccccccCCCCCCCC
Q 047954 102 NNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKT-QTLQLFRSYSYSNNPYLCGP 154 (582)
Q Consensus 102 ~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~l~~~ 154 (582)
+|++++..|.. .+++|+.|+|++|+|++..+.. ..+..+..+++++|++.|..
T Consensus 251 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC 306 (452)
T 3zyi_A 251 NSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDC 306 (452)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECST
T ss_pred CCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCC
Confidence 99888877763 6788899999999888654443 34677788888888887753
No 294
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.43 E-value=1.7e-13 Score=137.57 Aligned_cols=140 Identities=21% Similarity=0.285 Sum_probs=115.4
Q ss_pred CCcceeeeCCC---------CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccc--c-CCCCCCCCCCEEeC
Q 047954 9 SQWYGIQCDIN---------SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGN--F-MNFSSNHKLKDIDL 76 (582)
Q Consensus 9 ~~w~gv~c~~~---------~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~--~-~~~~~~~~l~~l~l 76 (582)
|.|.+|.|+.. ...++.|+|++|+++ .+|+..+..+++|+.|+|++|.++.. + ..+..+++|++|+|
T Consensus 7 C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 85 (306)
T 2z66_A 7 CSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL 85 (306)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEEC
T ss_pred eCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEEC
Confidence 78999999742 146899999999998 67777789999999999999999854 2 35667889999999
Q ss_pred CCCcccccccccccCCCcCCeeecccCcccCCCC-C--CCCCCCCEEEeecCcccccCCCC-CcccccccccccCCCC
Q 047954 77 SGNKFYGEISRSLLSLKFLESLQLQNNNLTGPVP-E--FNQSSLKVFNVSNNNLSGSIPKT-QTLQLFRSYSYSNNPY 150 (582)
Q Consensus 77 ~~N~l~g~ip~~~~~l~~l~~l~l~~N~l~g~ip-~--~~~~~l~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~ 150 (582)
++|.++ .+|..+..+++|++|+|++|++++..+ . ..+++|+.|++++|.+.+..|.. ..+..+..+++++|..
T Consensus 86 s~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 162 (306)
T 2z66_A 86 SFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSF 162 (306)
T ss_dssp CSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEE
T ss_pred CCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcc
Confidence 999998 588889999999999999999987655 2 26789999999999998887764 3467778888888754
No 295
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.43 E-value=6.6e-13 Score=131.03 Aligned_cols=135 Identities=18% Similarity=0.201 Sum_probs=110.3
Q ss_pred CCCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCC-CCCCCCCCEEeCCCCcccccccccccCCCcCCe
Q 047954 19 NSAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMN-FSSNHKLKDIDLSGNKFYGEISRSLLSLKFLES 97 (582)
Q Consensus 19 ~~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~-~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~ 97 (582)
...+++.|+|++|++++.. +..++.+++|++|+|++|.+++..+. +..+++|++|+|++|++++..|..++++++|+.
T Consensus 83 ~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 161 (272)
T 3rfs_A 83 ELTNLTYLILTGNQLQSLP-NGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTE 161 (272)
T ss_dssp TCTTCCEEECTTSCCCCCC-TTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred CCCCCCEEECCCCccCccC-hhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCE
Confidence 3567889999999998654 45678899999999999999987775 678889999999999999777777888999999
Q ss_pred eecccCcccCCCCCC--CCCCCCEEEeecCcccccCCCC-CcccccccccccCCCCCCCC
Q 047954 98 LQLQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKT-QTLQLFRSYSYSNNPYLCGP 154 (582)
Q Consensus 98 l~l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~l~~~ 154 (582)
|+|++|++++..|.. .+++|+.|+|++|.+++..|.. ..+..+..+++.+|+..|..
T Consensus 162 L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 221 (272)
T 3rfs_A 162 LDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC 221 (272)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred EECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccC
Confidence 999999999766653 6788999999999999876653 45778888889999877654
No 296
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.43 E-value=4.3e-13 Score=138.07 Aligned_cols=140 Identities=19% Similarity=0.153 Sum_probs=114.8
Q ss_pred CCcceeeeCCC---------CCeEEEEEeCCCcceeccCccccC-CCCCCcEEEccCCccccccC-CCCCCCCCCEEeCC
Q 047954 9 SQWYGIQCDIN---------SAHVTGIVLEDMRLNGEIKSDAFA-DIPELIVINFKNNIISGNFM-NFSSNHKLKDIDLS 77 (582)
Q Consensus 9 ~~w~gv~c~~~---------~~~~~~l~l~~~~l~g~ip~~~~~-~l~~L~~l~l~~n~~~g~~~-~~~~~~~l~~l~l~ 77 (582)
|.|..|.|..+ ...++.|+|++|++++.. +..+. .+++|+.|+|++|+|++..+ .|.++++|+.|+|+
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~-~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLR-AEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEEC-TTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccC-hhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 57888999642 133678999999999755 45566 89999999999999998887 48899999999999
Q ss_pred CCcccccccccccCCCcCCeeecccCcccCCCCCC--CCCCCCEEEeecCcccccCCCC-----CcccccccccccCCCC
Q 047954 78 GNKFYGEISRSLLSLKFLESLQLQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKT-----QTLQLFRSYSYSNNPY 150 (582)
Q Consensus 78 ~N~l~g~ip~~~~~l~~l~~l~l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~-----~~~~~~~~~~~~~n~~ 150 (582)
+|+|++..|..|.++++|++|+|++|++++..|.. .+++|+.|+|++|.|++ +|.. ..+..+..+++++|..
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~~~~l~~L~~L~L~~N~l 175 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR-FPVELIKDGNKLPKLMLLDLSSNKL 175 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCS-CCGGGTC----CTTCCEEECCSSCC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCe-eCHHHhcCcccCCcCCEEECCCCCC
Confidence 99999887888999999999999999999876763 68899999999999986 5543 2366777888888854
No 297
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.43 E-value=2.9e-13 Score=126.83 Aligned_cols=124 Identities=14% Similarity=0.182 Sum_probs=68.3
Q ss_pred eEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCCCCCCCCCCEEeCCCCcccccccccccCCCcCCeeecc
Q 047954 22 HVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQLQ 101 (582)
Q Consensus 22 ~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~l~ 101 (582)
+++.|+|++|+++ .+| .+..+++|+.|++++|.++. ++.+..+++|++|+|++|.+++..|..++.+++|++|+|+
T Consensus 45 ~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~l~~n~~~~-~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls 120 (197)
T 4ezg_A 45 SLTYITLANINVT-DLT--GIEYAHNIKDLTINNIHATN-YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDIS 120 (197)
T ss_dssp TCCEEEEESSCCS-CCT--TGGGCTTCSEEEEESCCCSC-CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECC
T ss_pred CccEEeccCCCcc-ChH--HHhcCCCCCEEEccCCCCCc-chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEec
Confidence 4556666666665 444 25555666666666664322 2345555566666666666665555556666666666666
Q ss_pred cCcccCCCCC--CCCCCCCEEEeecCcccccCCCCCcccccccccccCCC
Q 047954 102 NNNLTGPVPE--FNQSSLKVFNVSNNNLSGSIPKTQTLQLFRSYSYSNNP 149 (582)
Q Consensus 102 ~N~l~g~ip~--~~~~~l~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n~ 149 (582)
+|++++.+|. ..+++|+.|+|++|.+.+.+|....+..+..+++++|.
T Consensus 121 ~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~l~~l~~L~~L~l~~n~ 170 (197)
T 4ezg_A 121 HSAHDDSILTKINTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNIQFDG 170 (197)
T ss_dssp SSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCGGGGGCSSCCEEECTTBC
T ss_pred CCccCcHhHHHHhhCCCCCEEEccCCCCccccHhhcCCCCCCEEECCCCC
Confidence 6666554444 24555666666666544445543444555555555553
No 298
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.42 E-value=1.1e-12 Score=120.47 Aligned_cols=127 Identities=18% Similarity=0.190 Sum_probs=105.8
Q ss_pred EEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCC-CCCCCCCCEEeCCCCcccccccccccCCCcCCeeecc
Q 047954 23 VTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMN-FSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQLQ 101 (582)
Q Consensus 23 ~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~-~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~l~ 101 (582)
.+.+++++++++. +|.. ..++|+.|+|++|.+++..+. +..+++|++|+|++|++++..|..+.++++|++|+|+
T Consensus 9 ~~~l~~~~~~l~~-~p~~---~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 84 (177)
T 2o6r_A 9 GTEIRCNSKGLTS-VPTG---IPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLH 84 (177)
T ss_dssp TTEEECCSSCCSS-CCTT---CCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCEEEecCCCCcc-CCCC---CCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECC
Confidence 4578999999874 6543 347999999999999987765 6889999999999999997777778999999999999
Q ss_pred cCcccCCCCCC--CCCCCCEEEeecCcccccCCCC-CcccccccccccCCCCCCC
Q 047954 102 NNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKT-QTLQLFRSYSYSNNPYLCG 153 (582)
Q Consensus 102 ~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~l~~ 153 (582)
+|++++..|.. .+++|+.|+|++|.+++..+.. ..+..+..+++++|+..|.
T Consensus 85 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 85 ENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 99999876653 6899999999999999644433 4577888999999987664
No 299
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.42 E-value=1.1e-13 Score=157.22 Aligned_cols=129 Identities=11% Similarity=0.138 Sum_probs=114.8
Q ss_pred CCeEEEEEeCCCccee-----------------ccCccccC--CCCCCcEEEccCCccccccC-CCCCCCCCCEEeCCCC
Q 047954 20 SAHVTGIVLEDMRLNG-----------------EIKSDAFA--DIPELIVINFKNNIISGNFM-NFSSNHKLKDIDLSGN 79 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g-----------------~ip~~~~~--~l~~L~~l~l~~n~~~g~~~-~~~~~~~l~~l~l~~N 79 (582)
.++++.|+|++|+|+| .||.. ++ ++++|++|+|++|.+.|.+| .+.++++|+.|+|++|
T Consensus 447 L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~-l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N 525 (876)
T 4ecn_A 447 LTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEE-LSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACN 525 (876)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSC-CCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTC
T ss_pred CCCCCEEECcCCcCCCCcccccccccccccccccCChh-hhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCC
Confidence 4678999999999999 48765 66 99999999999999999998 4889999999999999
Q ss_pred c-ccc-cccccccCCC-------cCCeeecccCcccCCCCC--C--CCCCCCEEEeecCcccccCCCCCccccccccccc
Q 047954 80 K-FYG-EISRSLLSLK-------FLESLQLQNNNLTGPVPE--F--NQSSLKVFNVSNNNLSGSIPKTQTLQLFRSYSYS 146 (582)
Q Consensus 80 ~-l~g-~ip~~~~~l~-------~l~~l~l~~N~l~g~ip~--~--~~~~l~~l~ls~N~l~g~ip~~~~~~~~~~~~~~ 146 (582)
+ |+| .||..+++++ +|+.|+|++|+|+ .||. . .+++|+.|+|++|.++ .||....+..+..++++
T Consensus 526 ~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~~~~L~~L~~L~Ls 603 (876)
T 4ecn_A 526 RGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEAFGTNVKLTDLKLD 603 (876)
T ss_dssp TTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCCCCTTSEESEEECC
T ss_pred CCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchhhcCCCcceEEECc
Confidence 8 999 9999888776 9999999999999 8998 3 7899999999999999 89966677888889999
Q ss_pred CCCCC
Q 047954 147 NNPYL 151 (582)
Q Consensus 147 ~n~~l 151 (582)
+|...
T Consensus 604 ~N~l~ 608 (876)
T 4ecn_A 604 YNQIE 608 (876)
T ss_dssp SSCCS
T ss_pred CCccc
Confidence 88754
No 300
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.42 E-value=4.5e-13 Score=146.45 Aligned_cols=130 Identities=21% Similarity=0.315 Sum_probs=62.1
Q ss_pred EEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCC-CCCCCCCCEEeCCCCccc-ccccccccCCCcCCeeec
Q 047954 23 VTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMN-FSSNHKLKDIDLSGNKFY-GEISRSLLSLKFLESLQL 100 (582)
Q Consensus 23 ~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~-~~~~~~l~~l~l~~N~l~-g~ip~~~~~l~~l~~l~l 100 (582)
++.|+|++|.+++..|...+..+++|+.|+|++|.+++.+|. +.++++|+.|+|++|.++ |.+|..+..+++|++|+|
T Consensus 398 L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l 477 (570)
T 2z63_A 398 LEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDL 477 (570)
T ss_dssp CCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEEC
T ss_pred CCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEEC
Confidence 344444444444443333344445555555555555444442 344455555555555554 445555555555555555
Q ss_pred ccCcccCCCCCC--CCCCCCEEEeecCcccccCCCC-CcccccccccccCCCCCC
Q 047954 101 QNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKT-QTLQLFRSYSYSNNPYLC 152 (582)
Q Consensus 101 ~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~l~ 152 (582)
++|++++.+|.. .+++|+.|+|++|++++..|.. ..+..+..+++++|+..|
T Consensus 478 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 532 (570)
T 2z63_A 478 SQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 532 (570)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccC
Confidence 555555544432 3445555555555555444332 234444455555555444
No 301
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.41 E-value=7e-13 Score=125.20 Aligned_cols=113 Identities=19% Similarity=0.263 Sum_probs=99.6
Q ss_pred CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCC-CCCCCCCCEEeCCCCcccccccccccCCCcCCee
Q 047954 20 SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMN-FSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESL 98 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~-~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l 98 (582)
..+++.|+|++|++++ +|+..+..+++|++|+|++|.+++..+. +..+++|+.|+|++|++++..|..+.++++|++|
T Consensus 51 l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 129 (208)
T 2o6s_A 51 LTSLTQLYLGGNKLQS-LPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDL 129 (208)
T ss_dssp CTTCSEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cccCcEEECCCCccCc-cChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEE
Confidence 4679999999999995 5566688999999999999999987765 6889999999999999998777778999999999
Q ss_pred ecccCcccCCCCCC--CCCCCCEEEeecCcccccCCC
Q 047954 99 QLQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPK 133 (582)
Q Consensus 99 ~l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~ 133 (582)
+|++|++++..+.. .+++|+.|+|++|.+.|..|.
T Consensus 130 ~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 166 (208)
T 2o6s_A 130 RLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 166 (208)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTTT
T ss_pred ECCCCccceeCHHHhccCCCccEEEecCCCeecCCCC
Confidence 99999999766642 688999999999999988774
No 302
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.41 E-value=1.4e-13 Score=138.55 Aligned_cols=129 Identities=16% Similarity=0.172 Sum_probs=102.1
Q ss_pred CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccc--c-CC--CCCCCCCCEEeCCCCccc--cccccc-ccC
Q 047954 20 SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGN--F-MN--FSSNHKLKDIDLSGNKFY--GEISRS-LLS 91 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~--~-~~--~~~~~~l~~l~l~~N~l~--g~ip~~-~~~ 91 (582)
..+++.|+|++|++++.. +..++.+++|++|+|++|.+.|. + +. +..+++|++|+|++|+++ +.++.. +.+
T Consensus 144 ~~~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~ 222 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFS-CEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAA 222 (310)
T ss_dssp CSCCCEEEEECCSSCCCC-TTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcchhh-HHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhc
Confidence 467999999999997765 45689999999999999999874 2 22 367888999999999997 333333 478
Q ss_pred CCcCCeeecccCcccCCCCCC--CC---CCCCEEEeecCcccccCCCCCcccccccccccCCCCC
Q 047954 92 LKFLESLQLQNNNLTGPVPEF--NQ---SSLKVFNVSNNNLSGSIPKTQTLQLFRSYSYSNNPYL 151 (582)
Q Consensus 92 l~~l~~l~l~~N~l~g~ip~~--~~---~~l~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~l 151 (582)
+++|++|||++|++++.+|.. .+ ++|+.|+|++|.|+ .+|... ...+..+++++|...
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~-~~~L~~L~Ls~N~l~ 285 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGL-PAKLRVLDLSSNRLN 285 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCC-CSCCSCEECCSCCCC
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhh-cCCCCEEECCCCcCC
Confidence 899999999999999987753 33 68999999999998 777654 367888888888643
No 303
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.41 E-value=6.4e-13 Score=127.62 Aligned_cols=112 Identities=21% Similarity=0.234 Sum_probs=99.6
Q ss_pred CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCC-CCCCCCCCEEeCCCCcccccccccccCCCcCCee
Q 047954 20 SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMN-FSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESL 98 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~-~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l 98 (582)
...++.|+|++|+++ .+|+..+..+++|++|+|++|.|++..+. +..+.+|+.|+|++|+|+ .||..+.++++|++|
T Consensus 63 l~~L~~L~L~~N~l~-~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L 140 (229)
T 3e6j_A 63 LINLKELYLGSNQLG-ALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHL 140 (229)
T ss_dssp CTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEE
T ss_pred ccCCcEEECCCCCCC-CcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEE
Confidence 467999999999995 56677789999999999999999988775 688999999999999999 899999999999999
Q ss_pred ecccCcccCCCCCC--CCCCCCEEEeecCcccccCCC
Q 047954 99 QLQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPK 133 (582)
Q Consensus 99 ~l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~ 133 (582)
+|++|+|++..+.. .+++|+.|+|++|.+.+..+.
T Consensus 141 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 177 (229)
T 3e6j_A 141 ALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECRD 177 (229)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBGG
T ss_pred ECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcch
Confidence 99999999655542 678999999999999987653
No 304
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.41 E-value=4.9e-13 Score=153.15 Aligned_cols=139 Identities=17% Similarity=0.172 Sum_probs=114.1
Q ss_pred CCcceeeeCCCCCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCcccccc-C-CCCCCCCCCEEeCCCCccccccc
Q 047954 9 SQWYGIQCDINSAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNF-M-NFSSNHKLKDIDLSGNKFYGEIS 86 (582)
Q Consensus 9 ~~w~gv~c~~~~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~-~-~~~~~~~l~~l~l~~N~l~g~ip 86 (582)
++|+.|.+ ..++++.|+|++|.+++..| ..+..+++|++|+|++|.+.+.+ | .+.++++|++|+|++|.+++.+|
T Consensus 14 ~~L~~vP~--lp~~l~~LdLs~N~i~~i~~-~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p 90 (844)
T 3j0a_A 14 CNLTQVPQ--VLNTTERLLLSFNYIRTVTA-SSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHP 90 (844)
T ss_dssp CCSSCCCS--SCTTCCEEEEESCCCCEECS-SSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECT
T ss_pred CCCCCCCC--CCCCcCEEECCCCcCCccCh-hHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCH
Confidence 45777777 34689999999999998765 45899999999999999888887 3 48889999999999999999999
Q ss_pred ccccCCCcCCeeecccCcccCCCCCC----CCCCCCEEEeecCcccccCCC--CCcccccccccccCCCC
Q 047954 87 RSLLSLKFLESLQLQNNNLTGPVPEF----NQSSLKVFNVSNNNLSGSIPK--TQTLQLFRSYSYSNNPY 150 (582)
Q Consensus 87 ~~~~~l~~l~~l~l~~N~l~g~ip~~----~~~~l~~l~ls~N~l~g~ip~--~~~~~~~~~~~~~~n~~ 150 (582)
..+++|++|++|+|++|.+++.+|.. .+++|+.|+|++|.+++..|. ...+..+..+++++|..
T Consensus 91 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i 160 (844)
T 3j0a_A 91 DAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQI 160 (844)
T ss_dssp TSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCC
T ss_pred hHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcC
Confidence 99999999999999999999877752 678899999999999876553 24566677777777753
No 305
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.41 E-value=7.7e-13 Score=145.82 Aligned_cols=143 Identities=21% Similarity=0.149 Sum_probs=120.0
Q ss_pred CCCCc----ceeeeCC---------CCCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccC-CCCCCCCCC
Q 047954 7 FPSQW----YGIQCDI---------NSAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFM-NFSSNHKLK 72 (582)
Q Consensus 7 ~~~~w----~gv~c~~---------~~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~-~~~~~~~l~ 72 (582)
.||.| ..|.|.. -..+++.|+|++|++++..| ..++.+++|++|+|++|.+++..| .|.++++|+
T Consensus 5 ~~c~~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~ 83 (606)
T 3vq2_A 5 NPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKS-YSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLS 83 (606)
T ss_dssp -CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECT-TTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCC
T ss_pred CCceecCCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeCh-hhccCCccCcEEeCCCCcccccCHHHhhchhhcC
Confidence 35655 3577853 12568999999999998664 468999999999999999999887 478999999
Q ss_pred EEeCCCCcccccccccccCCCcCCeeecccCcccCCCCCC--CCCCCCEEEeecCcccc-cCCCC-CcccccccccccCC
Q 047954 73 DIDLSGNKFYGEISRSLLSLKFLESLQLQNNNLTGPVPEF--NQSSLKVFNVSNNNLSG-SIPKT-QTLQLFRSYSYSNN 148 (582)
Q Consensus 73 ~l~l~~N~l~g~ip~~~~~l~~l~~l~l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g-~ip~~-~~~~~~~~~~~~~n 148 (582)
+|+|++|.+++..|..|++|++|++|+|++|.+++..|.. .+++|+.|+|++|.+++ .+|.. ..+..+..+++++|
T Consensus 84 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n 163 (606)
T 3vq2_A 84 NLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYN 163 (606)
T ss_dssp EEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSS
T ss_pred EeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCC
Confidence 9999999999999999999999999999999999766543 78999999999999986 77864 45778888888888
Q ss_pred CC
Q 047954 149 PY 150 (582)
Q Consensus 149 ~~ 150 (582)
..
T Consensus 164 ~l 165 (606)
T 3vq2_A 164 YI 165 (606)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 306
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.41 E-value=5.1e-13 Score=147.26 Aligned_cols=129 Identities=19% Similarity=0.215 Sum_probs=74.8
Q ss_pred CeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCC-CCCCCCCCEEeCCCCccccc-ccccccCCCcCCee
Q 047954 21 AHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMN-FSSNHKLKDIDLSGNKFYGE-ISRSLLSLKFLESL 98 (582)
Q Consensus 21 ~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~-~~~~~~l~~l~l~~N~l~g~-ip~~~~~l~~l~~l 98 (582)
..++.|+|++|.+++..|...+..+++|++|++++|.+++.+|. +.++++|+.|+|++|.+++. +|..++++++|+.|
T Consensus 399 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 478 (606)
T 3vq2_A 399 EELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFL 478 (606)
T ss_dssp TTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred CCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEE
Confidence 45666666666666665534456666666666666666665543 45556666666666666653 55556666666666
Q ss_pred ecccCcccCCCCCC--CCCCCCEEEeecCcccccCCCC-CcccccccccccCCC
Q 047954 99 QLQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKT-QTLQLFRSYSYSNNP 149 (582)
Q Consensus 99 ~l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~ 149 (582)
+|++|++++.+|.. .+++|+.|+|++|++++.+|.. ..+..+..+++++|.
T Consensus 479 ~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~ 532 (606)
T 3vq2_A 479 DLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNR 532 (606)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSC
T ss_pred ECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCc
Confidence 66666666555542 4556666666666666555533 234445555555554
No 307
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.40 E-value=6.3e-13 Score=136.38 Aligned_cols=143 Identities=22% Similarity=0.256 Sum_probs=115.4
Q ss_pred CCCCCCcceeeeCCC-----------CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCC-CCCCCCCC
Q 047954 5 KDFPSQWYGIQCDIN-----------SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMN-FSSNHKLK 72 (582)
Q Consensus 5 ~~~~~~w~gv~c~~~-----------~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~-~~~~~~l~ 72 (582)
...+|.|.|+ |+.. ..+++.|+|++|++++ +|+..+..+++|+.|+|++|.+++..|. +.++++|+
T Consensus 26 ~~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 103 (353)
T 2z80_A 26 ASLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITY-ISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLE 103 (353)
T ss_dssp -CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred cCCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcc-cCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCC
Confidence 3456889998 6421 2368899999999997 5555689999999999999999998774 88999999
Q ss_pred EEeCCCCcccccccccccCCCcCCeeecccCcccCCCCC---C-CCCCCCEEEeecCcccccC-CCC-Cccccccccccc
Q 047954 73 DIDLSGNKFYGEISRSLLSLKFLESLQLQNNNLTGPVPE---F-NQSSLKVFNVSNNNLSGSI-PKT-QTLQLFRSYSYS 146 (582)
Q Consensus 73 ~l~l~~N~l~g~ip~~~~~l~~l~~l~l~~N~l~g~ip~---~-~~~~l~~l~ls~N~l~g~i-p~~-~~~~~~~~~~~~ 146 (582)
+|+|++|++++..+..+.++++|++|+|++|++++ +|. + .+++|+.|++++|+..+.+ |.. ..+..+..++++
T Consensus 104 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~ 182 (353)
T 2z80_A 104 HLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKT-LGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEID 182 (353)
T ss_dssp EEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSS-SCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEE
T ss_pred EEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcc-cCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECC
Confidence 99999999996555558999999999999999995 655 2 6899999999999644444 432 457778888888
Q ss_pred CCCC
Q 047954 147 NNPY 150 (582)
Q Consensus 147 ~n~~ 150 (582)
+|..
T Consensus 183 ~n~l 186 (353)
T 2z80_A 183 ASDL 186 (353)
T ss_dssp ETTC
T ss_pred CCCc
Confidence 8864
No 308
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.40 E-value=9.5e-13 Score=125.59 Aligned_cols=110 Identities=18% Similarity=0.172 Sum_probs=98.8
Q ss_pred CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCC-CCCCCCCCEEeCCCCcccccccccccCCCcCCee
Q 047954 20 SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMN-FSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESL 98 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~-~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l 98 (582)
..++..|+|++|++++..| ..+..+++|++|+|++|.|++..+. +.++.+|+.|+|++|++++..|..+.++++|++|
T Consensus 55 l~~L~~L~Ls~N~i~~~~~-~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 133 (220)
T 2v9t_B 55 YKKLRRIDLSNNQISELAP-DAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLL 133 (220)
T ss_dssp CTTCCEEECCSSCCCEECT-TTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCcCCCcCH-HHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEE
Confidence 4679999999999998765 4699999999999999999976665 6889999999999999999999999999999999
Q ss_pred ecccCcccCCCCCC--CCCCCCEEEeecCccccc
Q 047954 99 QLQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGS 130 (582)
Q Consensus 99 ~l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ 130 (582)
+|++|+|++..|.. .+++|+.|+|++|.+...
T Consensus 134 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 134 SLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred ECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 99999999877753 678999999999999864
No 309
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.39 E-value=1.2e-12 Score=129.38 Aligned_cols=110 Identities=17% Similarity=0.246 Sum_probs=74.1
Q ss_pred CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccC-CCCCCCCCCEEeCCCCcccccccccccCCCcCCee
Q 047954 20 SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFM-NFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESL 98 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~-~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l 98 (582)
..+++.|+|++|++++.. +..+..+++|++|+|++|.+++..+ .+.++++|+.|+|++|++++..+..++++++|++|
T Consensus 51 l~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 129 (276)
T 2z62_A 51 FPELQVLDLSRCEIQTIE-DGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKEL 129 (276)
T ss_dssp CTTCSEEECTTCCCCEEC-TTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEE
T ss_pred ccCCcEEECCCCcCCccC-HHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEE
Confidence 356777888888777543 4457777788888888887777664 36666777777777777776655566677777777
Q ss_pred ecccCcccC-CCCCC--CCCCCCEEEeecCccccc
Q 047954 99 QLQNNNLTG-PVPEF--NQSSLKVFNVSNNNLSGS 130 (582)
Q Consensus 99 ~l~~N~l~g-~ip~~--~~~~l~~l~ls~N~l~g~ 130 (582)
+|++|++++ .+|.. .+++|+.|+|++|.+++.
T Consensus 130 ~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~ 164 (276)
T 2z62_A 130 NVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 164 (276)
T ss_dssp ECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEE
T ss_pred ECcCCccceecCchhhccCCCCCEEECCCCCCCcC
Confidence 777777665 35543 456666666666666554
No 310
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.39 E-value=1.4e-12 Score=129.62 Aligned_cols=130 Identities=17% Similarity=0.139 Sum_probs=111.8
Q ss_pred CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCc-cccccC-CCCCCCCCCEEeCCCCcccccccccccCCCcCCe
Q 047954 20 SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNI-ISGNFM-NFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLES 97 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~-~~g~~~-~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~ 97 (582)
..+++.|+|++|.+++..| ..+..+++|++|+|++|. +++..| .+..+++|+.|+|++|.+++..|..+.++++|++
T Consensus 55 ~~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 133 (285)
T 1ozn_A 55 CRNLTILWLHSNVLARIDA-AAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQY 133 (285)
T ss_dssp CTTCCEEECCSSCCCEECT-TTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCE
T ss_pred CCCCCEEECCCCccceeCH-hhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCE
Confidence 4679999999999998765 468999999999999998 666645 5788999999999999999988999999999999
Q ss_pred eecccCcccCCCCCC--CCCCCCEEEeecCcccccCCC-CCcccccccccccCCCC
Q 047954 98 LQLQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPK-TQTLQLFRSYSYSNNPY 150 (582)
Q Consensus 98 l~l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~-~~~~~~~~~~~~~~n~~ 150 (582)
|+|++|.+++..+.. .+++|+.|+|++|.+++..+. ...+..+..+++++|..
T Consensus 134 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 189 (285)
T 1ozn_A 134 LYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRV 189 (285)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred EECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcc
Confidence 999999999766653 689999999999999975554 34577888899999864
No 311
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.39 E-value=8.9e-13 Score=145.70 Aligned_cols=133 Identities=18% Similarity=0.199 Sum_probs=112.6
Q ss_pred CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccc-cC-CCCCCCCCCEEeCCCCcccccccccccCCCcCCe
Q 047954 20 SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGN-FM-NFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLES 97 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~-~~-~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~ 97 (582)
...+..++++.|.+++..| ..+..++.|+.|+|++|.+.+. +| .+..+++|+.|||++|+|++.+|..|.+|++|++
T Consensus 444 l~~l~~l~ls~n~l~~~~~-~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~ 522 (635)
T 4g8a_A 444 LRNLIYLDISHTHTRVAFN-GIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQV 522 (635)
T ss_dssp CTTCCEEECTTSCCEECCT-TTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred ccccccccccccccccccc-cccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCE
Confidence 3457788888888888775 4578889999999999986554 45 4788899999999999999999999999999999
Q ss_pred eecccCcccCCCCCC--CCCCCCEEEeecCcccccCCCCC-cc-cccccccccCCCCCCC
Q 047954 98 LQLQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKTQ-TL-QLFRSYSYSNNPYLCG 153 (582)
Q Consensus 98 l~l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~~-~~-~~~~~~~~~~n~~l~~ 153 (582)
|+|++|+|++..|.. .+++|++|+|++|+|++..|... .+ ..+..+++++|++.|.
T Consensus 523 L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 523 LNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp EECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred EECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 999999999877763 68999999999999999888653 33 5788899999999874
No 312
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.39 E-value=4.6e-13 Score=143.49 Aligned_cols=139 Identities=20% Similarity=0.269 Sum_probs=101.3
Q ss_pred CcceeeeCCCCCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCC-CC-CCCCCCEEeCCCCcccccccc
Q 047954 10 QWYGIQCDINSAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMN-FS-SNHKLKDIDLSGNKFYGEISR 87 (582)
Q Consensus 10 ~w~gv~c~~~~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~-~~-~~~~l~~l~l~~N~l~g~ip~ 87 (582)
.+.++.|. ..+.+..|+|++|+++|..|. .++.+++|+.|+|++|.++|.+|. +. .+++|+.|+|++|.|++..+
T Consensus 110 ~l~~~~~~-~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~- 186 (487)
T 3oja_A 110 NISRVSCS-RGQGKKNIYLANNKITMLRDL-DEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG- 186 (487)
T ss_dssp CCCCEEEC-CCSSCEEEECCSSCCCSGGGB-CGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC-
T ss_pred cCCCCCcc-ccCCCCEEECCCCCCCCCCch-hhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccc-
Confidence 45666665 346688888888888877654 477788888888888888887653 43 67888888888888887632
Q ss_pred cccCCCcCCeeecccCcccCCCCCC-CCCCCCEEEeecCcccccCCCC-CcccccccccccCCCCCCC
Q 047954 88 SLLSLKFLESLQLQNNNLTGPVPEF-NQSSLKVFNVSNNNLSGSIPKT-QTLQLFRSYSYSNNPYLCG 153 (582)
Q Consensus 88 ~~~~l~~l~~l~l~~N~l~g~ip~~-~~~~l~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~l~~ 153 (582)
+..+++|+.|+|++|.|+|..|.+ .+++|+.|+|++|.|++ +|.. ..+..+..+++++|+..|+
T Consensus 187 -~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 187 -QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp -CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHH
T ss_pred -cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCc
Confidence 345788888888888888765554 56788888888888886 5543 3456677778888877654
No 313
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.39 E-value=5.1e-13 Score=145.42 Aligned_cols=107 Identities=17% Similarity=0.189 Sum_probs=91.8
Q ss_pred eEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccC-CCCCCCCCCEEeCCCCcccccccccccCCCcCCeeec
Q 047954 22 HVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFM-NFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQL 100 (582)
Q Consensus 22 ~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~-~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~l 100 (582)
.+..|+|++|+|++ ||. ++.+++|+.|+|++|.|+ .+| .++++++|+.|+|++|+|++ || .+++|++|+.|+|
T Consensus 442 ~L~~L~Ls~n~l~~-lp~--~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~L 515 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH--LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLL 515 (567)
T ss_dssp TCSEEECTTSCCSS-CCC--GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEEC
T ss_pred CceEEEecCCCCCC-CcC--ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEEC
Confidence 36789999999987 663 888999999999999999 565 68888999999999999997 78 8999999999999
Q ss_pred ccCcccCCC-CCC--CCCCCCEEEeecCcccccCCCC
Q 047954 101 QNNNLTGPV-PEF--NQSSLKVFNVSNNNLSGSIPKT 134 (582)
Q Consensus 101 ~~N~l~g~i-p~~--~~~~l~~l~ls~N~l~g~ip~~ 134 (582)
++|+|++.+ |.. .+++|+.|+|++|.|+|..|..
T Consensus 516 s~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 516 CNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQ 552 (567)
T ss_dssp CSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCT
T ss_pred CCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHH
Confidence 999999886 763 7889999999999999877643
No 314
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.38 E-value=8.5e-14 Score=140.37 Aligned_cols=131 Identities=15% Similarity=0.210 Sum_probs=94.2
Q ss_pred CCeEEEEEeCCCcceeccCcccc-CCCCCCcEEEccCCccccccCCCCCC-----CCCCEEeCCCCcccccccccccCCC
Q 047954 20 SAHVTGIVLEDMRLNGEIKSDAF-ADIPELIVINFKNNIISGNFMNFSSN-----HKLKDIDLSGNKFYGEISRSLLSLK 93 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~~~~-~~l~~L~~l~l~~n~~~g~~~~~~~~-----~~l~~l~l~~N~l~g~ip~~~~~l~ 93 (582)
..+++.|+|++|+++|.+|...+ +.+++|++|+|++|.+++....+..+ ++|++|+|++|++++..|..+++++
T Consensus 94 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 173 (312)
T 1wwl_A 94 ISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP 173 (312)
T ss_dssp TSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSSSSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCS
T ss_pred cCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcchhHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCC
Confidence 45678888888888888876532 77888888888888888873334444 7788888888888877778888888
Q ss_pred cCCeeecccCcccCCCC--C----CCCCCCCEEEeecCcccc--cCCCC--CcccccccccccCCCC
Q 047954 94 FLESLQLQNNNLTGPVP--E----FNQSSLKVFNVSNNNLSG--SIPKT--QTLQLFRSYSYSNNPY 150 (582)
Q Consensus 94 ~l~~l~l~~N~l~g~ip--~----~~~~~l~~l~ls~N~l~g--~ip~~--~~~~~~~~~~~~~n~~ 150 (582)
+|++|+|++|+++|.++ . ..+++|+.|+|++|.+++ .+|.. ..+..+..+++++|..
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l 240 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSL 240 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCC
T ss_pred CCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcC
Confidence 88888888888877632 1 356778888888888873 33322 1345677777777754
No 315
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.38 E-value=6.4e-13 Score=136.78 Aligned_cols=131 Identities=24% Similarity=0.301 Sum_probs=110.0
Q ss_pred CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccC-CCCCCCCCCEEeCCCCcccccccccccCCCcCCee
Q 047954 20 SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFM-NFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESL 98 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~-~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l 98 (582)
..+++.|+|++|++++.. +..+..+++|++|+|++|.|++..+ .+.++.+|+.|+|++|++++..|..|.++++|+.|
T Consensus 63 l~~L~~L~L~~N~i~~i~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 141 (361)
T 2xot_A 63 LTNLHSLLLSHNHLNFIS-SEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKL 141 (361)
T ss_dssp CTTCCEEECCSSCCCEEC-TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred ccccCEEECCCCcCCccC-hhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEE
Confidence 567999999999999755 5569999999999999999998877 47899999999999999999999999999999999
Q ss_pred ecccCcccCCCCCC------CCCCCCEEEeecCcccccCCCC--Ccccc--cccccccCCCCCCC
Q 047954 99 QLQNNNLTGPVPEF------NQSSLKVFNVSNNNLSGSIPKT--QTLQL--FRSYSYSNNPYLCG 153 (582)
Q Consensus 99 ~l~~N~l~g~ip~~------~~~~l~~l~ls~N~l~g~ip~~--~~~~~--~~~~~~~~n~~l~~ 153 (582)
+|++|+|++ +|.. .+++|+.|+|++|+|++ +|.. ..+.. +..+.+.+|++.|.
T Consensus 142 ~L~~N~l~~-l~~~~~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 142 YLSQNQISR-FPVELIKDGNKLPKLMLLDLSSNKLKK-LPLTDLQKLPAWVKNGLYLHNNPLECD 204 (361)
T ss_dssp ECCSSCCCS-CCGGGTC----CTTCCEEECCSSCCCC-CCHHHHHHSCHHHHTTEECCSSCEECC
T ss_pred ECCCCcCCe-eCHHHhcCcccCCcCCEEECCCCCCCc-cCHHHhhhccHhhcceEEecCCCccCC
Confidence 999999997 5542 47899999999999985 4421 12222 35678999998774
No 316
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.37 E-value=2.7e-12 Score=127.92 Aligned_cols=128 Identities=18% Similarity=0.110 Sum_probs=109.5
Q ss_pred CeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCCCCCCCCCCEEeCCCCcccccccccccCCCcCCeeec
Q 047954 21 AHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQL 100 (582)
Q Consensus 21 ~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~l 100 (582)
..++.|+|++|++++..| ..+..+++|+.|+|++|.+++..+ ...+++|+.|+|++|+++ .+|..+..+++|++|+|
T Consensus 31 ~~l~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l 107 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSL-ATLMPYTRLTQLNLDRAELTKLQV-DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107 (290)
T ss_dssp TTCCEEECTTSCCSEEEG-GGGTTCTTCCEEECTTSCCCEEEC-CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCcCCccCH-HHhhcCCCCCEEECCCCccCcccC-CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEEC
Confidence 468899999999987764 568999999999999999998655 478899999999999998 89999999999999999
Q ss_pred ccCcccCCCCCC--CCCCCCEEEeecCcccccCCCC-CcccccccccccCCCCC
Q 047954 101 QNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKT-QTLQLFRSYSYSNNPYL 151 (582)
Q Consensus 101 ~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~l 151 (582)
++|++++..|.. .+++|+.|+|++|++++..|.. ..+..+..+++++|...
T Consensus 108 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 161 (290)
T 1p9a_G 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT 161 (290)
T ss_dssp CSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCS
T ss_pred CCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCC
Confidence 999999766653 7899999999999999654433 35678888999998654
No 317
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.37 E-value=1.8e-12 Score=128.05 Aligned_cols=129 Identities=22% Similarity=0.188 Sum_probs=111.5
Q ss_pred CeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccC-CCCCCCCCCEEeCCCCcccccccccccCCCcCCeee
Q 047954 21 AHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFM-NFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQ 99 (582)
Q Consensus 21 ~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~-~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~ 99 (582)
..++.|+|++|++++.. +..+..+++|++|+|++|.+++..+ .+.++++|++|+|++|.+++..|..+.++++|++|+
T Consensus 28 ~~l~~L~ls~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLG-SYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (276)
T ss_dssp TTCCEEECTTCCCCEEC-TTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred CCccEEECCCCcccccC-HhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEE
Confidence 35899999999999765 4468999999999999999998876 588899999999999999999999999999999999
Q ss_pred cccCcccCCCCC--CCCCCCCEEEeecCcccc-cCCCC-CcccccccccccCCCC
Q 047954 100 LQNNNLTGPVPE--FNQSSLKVFNVSNNNLSG-SIPKT-QTLQLFRSYSYSNNPY 150 (582)
Q Consensus 100 l~~N~l~g~ip~--~~~~~l~~l~ls~N~l~g-~ip~~-~~~~~~~~~~~~~n~~ 150 (582)
|++|++++..+. ..+++|+.|+|++|.+++ .+|.. ..+..+..+++++|..
T Consensus 107 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l 161 (276)
T 2z62_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 161 (276)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCC
T ss_pred CCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCC
Confidence 999999986663 378999999999999987 46754 4567788888888853
No 318
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.37 E-value=2e-12 Score=138.24 Aligned_cols=140 Identities=19% Similarity=0.229 Sum_probs=117.7
Q ss_pred CcceeeeCCC---------CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccC-CCCCCCCCCEEeCCCC
Q 047954 10 QWYGIQCDIN---------SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFM-NFSSNHKLKDIDLSGN 79 (582)
Q Consensus 10 ~w~gv~c~~~---------~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~-~~~~~~~l~~l~l~~N 79 (582)
.|..|.|... ...++.|+|++|++++..| ..+..+++|++|+|++|.+++..| .+.++++|++|+|++|
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQ-DEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECT-TTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECH-hHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 4889999642 2457899999999998664 568999999999999999999876 5889999999999999
Q ss_pred cccccccccccCCCcCCeeecccCcccCCCCCC--CCCCCCEEEeecCcccccCCCC-CcccccccccccCCCC
Q 047954 80 KFYGEISRSLLSLKFLESLQLQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKT-QTLQLFRSYSYSNNPY 150 (582)
Q Consensus 80 ~l~g~ip~~~~~l~~l~~l~l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~ 150 (582)
++++..+..+.++++|++|+|++|++++.+|.. .+++|+.|+|++|.+++..|.. ..+..+..+++++|..
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 164 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNL 164 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCC
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcC
Confidence 999666667899999999999999999887764 6889999999999998877643 4567778888888754
No 319
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.37 E-value=1.9e-12 Score=118.15 Aligned_cols=105 Identities=20% Similarity=0.178 Sum_probs=89.2
Q ss_pred EEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCC-CCCCCCCCEEeCCCCcccccccccccCCCcCCeeecccC
Q 047954 25 GIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMN-FSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQLQNN 103 (582)
Q Consensus 25 ~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~-~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~l~~N 103 (582)
.|++++|+|+. ||.. + .++|++|+|++|.|++..|. +.++++|+.|+|++|+|++..|..+.++++|++|+|++|
T Consensus 13 ~l~~s~n~l~~-ip~~-~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 13 TVDCSGKSLAS-VPTG-I--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp EEECTTSCCSS-CCSC-C--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcCc-cCcc-C--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 55666778875 7654 3 48999999999999999874 889999999999999999777777899999999999999
Q ss_pred cccCCCCC-C-CCCCCCEEEeecCcccccCCC
Q 047954 104 NLTGPVPE-F-NQSSLKVFNVSNNNLSGSIPK 133 (582)
Q Consensus 104 ~l~g~ip~-~-~~~~l~~l~ls~N~l~g~ip~ 133 (582)
+|++..|. + .+++|+.|+|++|.|++..+.
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~ 120 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACSD 120 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBGG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCchh
Confidence 99986665 2 689999999999999877653
No 320
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.37 E-value=6.6e-13 Score=149.02 Aligned_cols=108 Identities=24% Similarity=0.259 Sum_probs=57.2
Q ss_pred ccccCCCCCCcEEEccCCccccccCCCCCCCCCCEEeCCCCcccccccccccCCCcCCeeecccCcccCCCCCC--CCCC
Q 047954 39 SDAFADIPELIVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQLQNNNLTGPVPEF--NQSS 116 (582)
Q Consensus 39 ~~~~~~l~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~l~~N~l~g~ip~~--~~~~ 116 (582)
+..+..++.|+.|+|++|.++...+.+.++++|+.|+|++|.|+ .||..|++|++|++|+|++|.|+ .||.. .+++
T Consensus 217 ~~~~~~l~~L~~L~Ls~n~l~~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~ 294 (727)
T 4b8c_D 217 KDSKYDDQLWHALDLSNLQIFNISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQ 294 (727)
T ss_dssp -----CCCCCCEEECTTSCCSCCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTT
T ss_pred hhhhccCCCCcEEECCCCCCCCCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCC
Confidence 33445555666666666665522224445555666666666665 55655666666666666666665 55543 4555
Q ss_pred CCEEEeecCcccccCCCC-CcccccccccccCCC
Q 047954 117 LKVFNVSNNNLSGSIPKT-QTLQLFRSYSYSNNP 149 (582)
Q Consensus 117 l~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~ 149 (582)
|+.|+|++|.|+ .||.. ..+..|..+++++|.
T Consensus 295 L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~ 327 (727)
T 4b8c_D 295 LKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNP 327 (727)
T ss_dssp CSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSC
T ss_pred CCEEECCCCCCC-ccChhhhcCCCccEEeCCCCc
Confidence 666666666554 45543 334455555555554
No 321
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.37 E-value=1.4e-12 Score=140.92 Aligned_cols=131 Identities=18% Similarity=0.226 Sum_probs=105.0
Q ss_pred CCCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCcccc--ccC-CCCCCCCCCEEeCCCCccccccccc-ccCCCc
Q 047954 19 NSAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISG--NFM-NFSSNHKLKDIDLSGNKFYGEISRS-LLSLKF 94 (582)
Q Consensus 19 ~~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g--~~~-~~~~~~~l~~l~l~~N~l~g~ip~~-~~~l~~ 94 (582)
....++.|+|++|++++.+|. .++.+++|++|+|++|.+++ .+| .+..+++|+.|+|++|.+++.+|.. +..+++
T Consensus 322 ~l~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~ 400 (520)
T 2z7x_B 322 KISPFLHLDFSNNLLTDTVFE-NCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKS 400 (520)
T ss_dssp SCCCCCEEECCSSCCCTTTTT-TCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTT
T ss_pred hCCcccEEEeECCccChhhhh-hhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCcc
Confidence 356788889999999887765 47888899999999999887 454 4677888999999999998878875 778888
Q ss_pred CCeeecccCcccCCCCCCCCCCCCEEEeecCcccccCCCC-CcccccccccccCCCCC
Q 047954 95 LESLQLQNNNLTGPVPEFNQSSLKVFNVSNNNLSGSIPKT-QTLQLFRSYSYSNNPYL 151 (582)
Q Consensus 95 l~~l~l~~N~l~g~ip~~~~~~l~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~l 151 (582)
|+.|+|++|+++|.+|....++|+.|+|++|+++ .+|.. ..+..+..+++++|...
T Consensus 401 L~~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~ 457 (520)
T 2z7x_B 401 LLSLNMSSNILTDTIFRCLPPRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK 457 (520)
T ss_dssp CCEEECCSSCCCGGGGGSCCTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC
T ss_pred CCEEECcCCCCCcchhhhhcccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC
Confidence 9999999998888888765578888888888888 67754 45677788888888654
No 322
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.37 E-value=7.5e-13 Score=133.39 Aligned_cols=127 Identities=20% Similarity=0.214 Sum_probs=61.9
Q ss_pred CeEEEEEeCCCcceeccCccccCCC-----CCCcEEEccCCccccccC-CCCCCCCCCEEeCCCCccccc--ccccc--c
Q 047954 21 AHVTGIVLEDMRLNGEIKSDAFADI-----PELIVINFKNNIISGNFM-NFSSNHKLKDIDLSGNKFYGE--ISRSL--L 90 (582)
Q Consensus 21 ~~~~~l~l~~~~l~g~ip~~~~~~l-----~~L~~l~l~~n~~~g~~~-~~~~~~~l~~l~l~~N~l~g~--ip~~~--~ 90 (582)
.+++.|+|++|++++. |. .++.+ ++|++|+|++|.+++..| .+..+++|+.|+|++|+++|. +|..+ +
T Consensus 121 ~~L~~L~Ls~N~l~~~-~~-~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 121 PDLNILNLRNVSWATR-DA-WLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp CCCSEEEEESCBCSSS-SS-HHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred CCccEEEccCCCCcch-hH-HHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 4455666666666554 32 23333 555555555555555543 345555555555555555554 23333 4
Q ss_pred CCCcCCeeecccCcccC--CCCCC---CCCCCCEEEeecCcccccCCC--CCcccccccccccCCC
Q 047954 91 SLKFLESLQLQNNNLTG--PVPEF---NQSSLKVFNVSNNNLSGSIPK--TQTLQLFRSYSYSNNP 149 (582)
Q Consensus 91 ~l~~l~~l~l~~N~l~g--~ip~~---~~~~l~~l~ls~N~l~g~ip~--~~~~~~~~~~~~~~n~ 149 (582)
++++|++|+|++|++++ .+|.. .+++|+.|+|++|.+++.+|. ...+..+..+++++|.
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~ 264 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTG 264 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSC
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCc
Confidence 55555555555555552 22221 334555555555555554421 1223444445555543
No 323
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.36 E-value=2.2e-12 Score=142.23 Aligned_cols=139 Identities=18% Similarity=0.241 Sum_probs=119.0
Q ss_pred cceeeeCCC---------CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccC-CCCCCCCCCEEeCCCCc
Q 047954 11 WYGIQCDIN---------SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFM-NFSSNHKLKDIDLSGNK 80 (582)
Q Consensus 11 w~gv~c~~~---------~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~-~~~~~~~l~~l~l~~N~ 80 (582)
+..|.|... ...++.|+|++|++++..| ..++.+++|++|+|++|.+++..| .|.++++|++|+|++|.
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 92 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQN-TTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANP 92 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECT-TTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCCh-hHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCc
Confidence 445778531 2468999999999997664 569999999999999999999877 48999999999999999
Q ss_pred ccccccccccCCCcCCeeecccCcccCC--CCCCCCCCCCEEEeecCcccc-cCCCCCcccccccccccCCCC
Q 047954 81 FYGEISRSLLSLKFLESLQLQNNNLTGP--VPEFNQSSLKVFNVSNNNLSG-SIPKTQTLQLFRSYSYSNNPY 150 (582)
Q Consensus 81 l~g~ip~~~~~l~~l~~l~l~~N~l~g~--ip~~~~~~l~~l~ls~N~l~g-~ip~~~~~~~~~~~~~~~n~~ 150 (582)
+++..|..++++++|++|+|++|.+++. .+-..+++|+.|+|++|.+++ .+|....+..+..+++++|..
T Consensus 93 l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 165 (606)
T 3t6q_A 93 LIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAI 165 (606)
T ss_dssp CSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCC
T ss_pred ccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcc
Confidence 9999999999999999999999999984 333478999999999999998 667766678888888888854
No 324
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.36 E-value=6.4e-13 Score=124.45 Aligned_cols=127 Identities=11% Similarity=0.164 Sum_probs=108.4
Q ss_pred CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCcccccc-CCCCCCCCCCEEeCCCCcccccccccccCCCcCCee
Q 047954 20 SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNF-MNFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESL 98 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~-~~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l 98 (582)
..+++.|+|++|.++ .++ .+..+++|++|+|++|.+++.. ..+..+++|+.|+|++|.+++.+|..++.+++|++|
T Consensus 65 l~~L~~L~l~~n~~~--~~~-~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L 141 (197)
T 4ezg_A 65 AHNIKDLTINNIHAT--NYN-PISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSI 141 (197)
T ss_dssp CTTCSEEEEESCCCS--CCG-GGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEE
T ss_pred CCCCCEEEccCCCCC--cch-hhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEE
Confidence 457899999999664 333 5889999999999999999965 578899999999999999999999999999999999
Q ss_pred ecccCcccCCCCCC-CCCCCCEEEeecCcccccCCCCCcccccccccccCCCC
Q 047954 99 QLQNNNLTGPVPEF-NQSSLKVFNVSNNNLSGSIPKTQTLQLFRSYSYSNNPY 150 (582)
Q Consensus 99 ~l~~N~l~g~ip~~-~~~~l~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~ 150 (582)
+|++|.+.+.+|.. .+++|+.|++++|.+++ +|....+..+..+++.+|+.
T Consensus 142 ~L~~n~~i~~~~~l~~l~~L~~L~l~~n~i~~-~~~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 142 DLSYNGAITDIMPLKTLPELKSLNIQFDGVHD-YRGIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp ECCSCTBCCCCGGGGGCSSCCEEECTTBCCCC-CTTGGGCSSCCEEEECBC--
T ss_pred EccCCCCccccHhhcCCCCCCEEECCCCCCcC-hHHhccCCCCCEEEeeCccc
Confidence 99999966677764 78999999999999987 55555677888889998863
No 325
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.36 E-value=2.9e-12 Score=117.41 Aligned_cols=105 Identities=21% Similarity=0.199 Sum_probs=88.2
Q ss_pred EEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccC-CCCCCCCCCEEeCCCCcccccccccccCCCcCCeeeccc
Q 047954 24 TGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFM-NFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQLQN 102 (582)
Q Consensus 24 ~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~-~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~l~~ 102 (582)
+.+++++|+| +.||.. + .++|++|+|++|.|++.+| .+.++++|+.|+|++|+|++..+..+.++++|++|+|++
T Consensus 15 ~~l~~~~n~l-~~iP~~-~--~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIRL-ASVPAG-I--PTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SEEECCSSCC-SSCCSC-C--CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred cEEEeCCCCC-CccCCC-c--CCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 5688999998 478764 3 3899999999999999987 578899999999999999986555678999999999999
Q ss_pred CcccCCCCC-C-CCCCCCEEEeecCcccccCC
Q 047954 103 NNLTGPVPE-F-NQSSLKVFNVSNNNLSGSIP 132 (582)
Q Consensus 103 N~l~g~ip~-~-~~~~l~~l~ls~N~l~g~ip 132 (582)
|+|++..|. + .+++|+.|+|++|.|....+
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 999975554 2 68899999999999986543
No 326
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.35 E-value=3.1e-12 Score=135.83 Aligned_cols=140 Identities=17% Similarity=0.138 Sum_probs=116.2
Q ss_pred CcceeeeCCC---------CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccC-CCCCCCCCCEEeCCCC
Q 047954 10 QWYGIQCDIN---------SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFM-NFSSNHKLKDIDLSGN 79 (582)
Q Consensus 10 ~w~gv~c~~~---------~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~-~~~~~~~l~~l~l~~N 79 (582)
.|..|.|... ...++.|+|++|++++..| ..+..+++|+.|+|++|.+++..+ .+.++++|+.|+|++|
T Consensus 55 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 133 (452)
T 3zyi_A 55 QFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQA-DTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDN 133 (452)
T ss_dssp SSCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECT-TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCcEEEECCCCcCccCCCCCCCccEEECcCCcCceECH-HHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCC
Confidence 3678999642 2468899999999998664 568999999999999999999886 5888999999999999
Q ss_pred cccccccccccCCCcCCeeecccCcccCCCCCC--CCCCCCEEEeecCcccccCCCC--CcccccccccccCCCC
Q 047954 80 KFYGEISRSLLSLKFLESLQLQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKT--QTLQLFRSYSYSNNPY 150 (582)
Q Consensus 80 ~l~g~ip~~~~~l~~l~~l~l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~--~~~~~~~~~~~~~n~~ 150 (582)
++++..+..+.++++|++|+|++|++++..+.. .+++|+.|+|++|+..+.+|.. ..+..+..+++++|..
T Consensus 134 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l 208 (452)
T 3zyi_A 134 WLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNI 208 (452)
T ss_dssp CCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred cCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcc
Confidence 999777778999999999999999998543332 6789999999997777777753 4567788888888854
No 327
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.35 E-value=1.8e-12 Score=119.08 Aligned_cols=123 Identities=17% Similarity=0.204 Sum_probs=98.6
Q ss_pred CCeEEEEEeCCCcceeccCccccCCC-CCCcEEEccCCccccccCCCCCCCCCCEEeCCCCcccccccccccCCCcCCee
Q 047954 20 SAHVTGIVLEDMRLNGEIKSDAFADI-PELIVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESL 98 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~~~~~~l-~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l 98 (582)
...++.|+|++|+++ .+| . +..+ ++|++|+|++|.+++. +.+..+++|+.|+|++|.+++..|..+..+++|++|
T Consensus 18 ~~~L~~L~l~~n~l~-~i~-~-~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 18 AVRDRELDLRGYKIP-VIE-N-LGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTEL 93 (176)
T ss_dssp TTSCEEEECTTSCCC-SCC-C-GGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred cCCceEEEeeCCCCc-hhH-H-hhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCcccccCcchhhcCCCCCEE
Confidence 357999999999999 454 3 4444 4999999999999986 889999999999999999996544555999999999
Q ss_pred ecccCcccCCCCC---C-CCCCCCEEEeecCcccccCCCC-----CcccccccccccCC
Q 047954 99 QLQNNNLTGPVPE---F-NQSSLKVFNVSNNNLSGSIPKT-----QTLQLFRSYSYSNN 148 (582)
Q Consensus 99 ~l~~N~l~g~ip~---~-~~~~l~~l~ls~N~l~g~ip~~-----~~~~~~~~~~~~~n 148 (582)
+|++|.++ .+|. . .+++|+.|++++|.++ .+|.. ..++.+..+++++|
T Consensus 94 ~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n 150 (176)
T 1a9n_A 94 ILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKV 150 (176)
T ss_dssp ECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEEC
T ss_pred ECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcC
Confidence 99999995 5665 2 6789999999999997 45642 33555666666555
No 328
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.35 E-value=3.7e-12 Score=139.10 Aligned_cols=131 Identities=19% Similarity=0.222 Sum_probs=108.8
Q ss_pred CCCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCcccc--ccC-CCCCCCCCCEEeCCCCccccccccc-ccCCCc
Q 047954 19 NSAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISG--NFM-NFSSNHKLKDIDLSGNKFYGEISRS-LLSLKF 94 (582)
Q Consensus 19 ~~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g--~~~-~~~~~~~l~~l~l~~N~l~g~ip~~-~~~l~~ 94 (582)
...+++.|+|++|++++.+|. .++.+++|+.|+|++|.+++ .+| .+.++++|+.|+|++|.+++.+|.. +..+++
T Consensus 351 ~l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 351 SPSSFTFLNFTQNVFTDSVFQ-GCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SCCCCCEEECCSSCCCTTTTT-TCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred CCCCceEEECCCCccccchhh-hhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 456789999999999998865 48899999999999999997 334 4788899999999999999988865 778899
Q ss_pred CCeeecccCcccCCCCCCCCCCCCEEEeecCcccccCCCC-CcccccccccccCCCCC
Q 047954 95 LESLQLQNNNLTGPVPEFNQSSLKVFNVSNNNLSGSIPKT-QTLQLFRSYSYSNNPYL 151 (582)
Q Consensus 95 l~~l~l~~N~l~g~ip~~~~~~l~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~l 151 (582)
|++|+|++|+++|.+|....++|+.|+|++|+++ .||.. ..+..+..+++++|...
T Consensus 430 L~~L~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~ 486 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK 486 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCCTTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC
T ss_pred CCEEECCCCCCCcchhhhhcCcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC
Confidence 9999999999999888754478999999999988 67754 45677888888888654
No 329
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.34 E-value=1.1e-12 Score=144.49 Aligned_cols=130 Identities=21% Similarity=0.235 Sum_probs=84.0
Q ss_pred CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCC-CCCCCCCCEEeCCCCccccc---ccccccCCCcC
Q 047954 20 SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMN-FSSNHKLKDIDLSGNKFYGE---ISRSLLSLKFL 95 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~-~~~~~~l~~l~l~~N~l~g~---ip~~~~~l~~l 95 (582)
.+.++.|+|++|.+++.+|+..+..+++|+.|+|++|.+++.+|. +..+++|+.|+|++|.+++. .+..+..+++|
T Consensus 399 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L 478 (606)
T 3t6q_A 399 CPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRL 478 (606)
T ss_dssp CTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTC
T ss_pred CccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCc
Confidence 355777777777777776655567777777777777777776653 56666777777777777662 22456667777
Q ss_pred CeeecccCcccCCCCCC--CCCCCCEEEeecCcccccCCCC-CcccccccccccCCCC
Q 047954 96 ESLQLQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKT-QTLQLFRSYSYSNNPY 150 (582)
Q Consensus 96 ~~l~l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~ 150 (582)
++|+|++|++++.+|.. .+++|+.|+|++|++++.+|.. ..+..+ .+++++|..
T Consensus 479 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l 535 (606)
T 3t6q_A 479 EILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHI 535 (606)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCC
T ss_pred cEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcc
Confidence 77777777777666653 5566777777777776666543 234444 555566543
No 330
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.34 E-value=1.9e-12 Score=140.00 Aligned_cols=129 Identities=22% Similarity=0.364 Sum_probs=113.1
Q ss_pred CCeEEEEEeCCCccee--ccCccccCCCCCCcEEEccCCccccccC--CCCCCCCCCEEeCCCCcccccccccccCCCcC
Q 047954 20 SAHVTGIVLEDMRLNG--EIKSDAFADIPELIVINFKNNIISGNFM--NFSSNHKLKDIDLSGNKFYGEISRSLLSLKFL 95 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g--~ip~~~~~~l~~L~~l~l~~n~~~g~~~--~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l 95 (582)
...++.|+|++|++++ .+| ..++.+++|++|+|++|.+++.+| .+..+++|+.|+|++|.++|.+|..+. ++|
T Consensus 347 l~~L~~L~L~~N~l~~l~~~~-~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L 423 (520)
T 2z7x_B 347 LTELETLILQMNQLKELSKIA-EMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRI 423 (520)
T ss_dssp CSSCCEEECCSSCCCBHHHHH-HHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTC
T ss_pred CCCCCEEEccCCccCccccch-HHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccC
Confidence 4679999999999997 664 358999999999999999999776 378889999999999999999998876 799
Q ss_pred CeeecccCcccCCCCCC--CCCCCCEEEeecCcccccCCCC--CcccccccccccCCCCCCC
Q 047954 96 ESLQLQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKT--QTLQLFRSYSYSNNPYLCG 153 (582)
Q Consensus 96 ~~l~l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~--~~~~~~~~~~~~~n~~l~~ 153 (582)
+.|+|++|+++ .||.. .+++|+.|+|++|+|+ .+|.. ..+..+..+++++|+..|.
T Consensus 424 ~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~ 483 (520)
T 2z7x_B 424 KVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCS 483 (520)
T ss_dssp CEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCccc
Confidence 99999999999 88874 7899999999999999 57764 4577888999999988764
No 331
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.34 E-value=2.6e-12 Score=140.38 Aligned_cols=129 Identities=20% Similarity=0.348 Sum_probs=112.2
Q ss_pred CCeEEEEEeCCCccee--ccCccccCCCCCCcEEEccCCccccccCC--CCCCCCCCEEeCCCCcccccccccccCCCcC
Q 047954 20 SAHVTGIVLEDMRLNG--EIKSDAFADIPELIVINFKNNIISGNFMN--FSSNHKLKDIDLSGNKFYGEISRSLLSLKFL 95 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g--~ip~~~~~~l~~L~~l~l~~n~~~g~~~~--~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l 95 (582)
.+.++.|+|++|++++ .+| ..++.+++|+.|+|++|.+++.+|. +..+++|+.|+|++|+++|.+|..+. ++|
T Consensus 376 l~~L~~L~L~~N~l~~~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L 452 (562)
T 3a79_B 376 LKRLQTLILQRNGLKNFFKVA-LMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKV 452 (562)
T ss_dssp CSSCCEEECCSSCCCBTTHHH-HTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTC
T ss_pred cCCCCEEECCCCCcCCcccch-hhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcC
Confidence 4679999999999997 443 3588999999999999999997763 78889999999999999999998776 789
Q ss_pred CeeecccCcccCCCCCC--CCCCCCEEEeecCcccccCCCC--CcccccccccccCCCCCCC
Q 047954 96 ESLQLQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKT--QTLQLFRSYSYSNNPYLCG 153 (582)
Q Consensus 96 ~~l~l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~--~~~~~~~~~~~~~n~~l~~ 153 (582)
+.|+|++|+++ .||.. .+++|+.|+|++|+|+ .+|.. ..+..+..+++++|++.|.
T Consensus 453 ~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~ 512 (562)
T 3a79_B 453 KVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCT 512 (562)
T ss_dssp SEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCC
T ss_pred CEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCC
Confidence 99999999999 78874 7899999999999999 57764 4577888899999988764
No 332
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.34 E-value=3.4e-12 Score=130.49 Aligned_cols=108 Identities=17% Similarity=0.182 Sum_probs=91.9
Q ss_pred CCCcceeeeCCCCCeEEEEEeCCC-cceeccCccccCCCCCCcEEEccC-CccccccC-CCCCCCCCCEEeCCCCccccc
Q 047954 8 PSQWYGIQCDINSAHVTGIVLEDM-RLNGEIKSDAFADIPELIVINFKN-NIISGNFM-NFSSNHKLKDIDLSGNKFYGE 84 (582)
Q Consensus 8 ~~~w~gv~c~~~~~~~~~l~l~~~-~l~g~ip~~~~~~l~~L~~l~l~~-n~~~g~~~-~~~~~~~l~~l~l~~N~l~g~ 84 (582)
.|.|.+|.|+ ++ +|++ ||. +..+++|+.|+|++ |.|++.++ .|.++.+|+.|+|++|+|+|.
T Consensus 7 ~C~~~~v~~~------------~~n~l~~-ip~--l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 71 (347)
T 2ifg_A 7 PHGSSGLRCT------------RDGALDS-LHH--LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFV 71 (347)
T ss_dssp CSSSSCEECC------------SSCCCTT-TTT--SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEE
T ss_pred cccCCEEEcC------------CCCCCCc-cCC--CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCcccee
Confidence 3778888885 34 6764 775 89999999999996 99999886 589999999999999999999
Q ss_pred ccccccCCCcCCeeecccCcccCCCCCC-CCCCCCEEEeecCccccc
Q 047954 85 ISRSLLSLKFLESLQLQNNNLTGPVPEF-NQSSLKVFNVSNNNLSGS 130 (582)
Q Consensus 85 ip~~~~~l~~l~~l~l~~N~l~g~ip~~-~~~~l~~l~ls~N~l~g~ 130 (582)
.|..|.+|++|+.|+|++|+|++..|.. ....|+.|+|++|.|...
T Consensus 72 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 72 APDAFHFTPRLSRLNLSFNALESLSWKTVQGLSLQELVLSGNPLHCS 118 (347)
T ss_dssp CTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCCCCEEECCSSCCCCC
T ss_pred CHHHhcCCcCCCEEeCCCCccceeCHHHcccCCceEEEeeCCCccCC
Confidence 9999999999999999999999654442 333499999999999864
No 333
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.33 E-value=2.9e-12 Score=140.97 Aligned_cols=129 Identities=16% Similarity=0.218 Sum_probs=108.2
Q ss_pred CeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccC-CCCCCCCCCEEeCCCCcccccccccccCCCcCCeee
Q 047954 21 AHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFM-NFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQ 99 (582)
Q Consensus 21 ~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~-~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~ 99 (582)
..+..+++++|.++ .+|+..++.+++|++|+|++|.+++..| .+..+++|+.|+|++|.+++..|..++++++|++|+
T Consensus 51 ~~l~~l~l~~~~l~-~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 51 NNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp CCCSEEEESSCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCCCC-CcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 34567888888875 4677778889999999999999999887 688999999999999999998888899999999999
Q ss_pred cccCcccCCCCCC--CCCCCCEEEeecCcccccCCCC-CcccccccccccCCCC
Q 047954 100 LQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKT-QTLQLFRSYSYSNNPY 150 (582)
Q Consensus 100 l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~ 150 (582)
|++|.|++..|.. .+++|+.|+|++|.+++..|.. ..+..+..+++++|..
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 183 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRL 183 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCC
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCC
Confidence 9999999544432 6889999999999999887753 4577888888888854
No 334
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.33 E-value=1.6e-12 Score=130.85 Aligned_cols=131 Identities=15% Similarity=0.113 Sum_probs=104.2
Q ss_pred CCeEEEEEeCCCcceeccCc---cccCCCCCCcEEEccCCccccccC-CCCCCCCCCEEeCCCCccccc--ccc--cccC
Q 047954 20 SAHVTGIVLEDMRLNGEIKS---DAFADIPELIVINFKNNIISGNFM-NFSSNHKLKDIDLSGNKFYGE--ISR--SLLS 91 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~---~~~~~l~~L~~l~l~~n~~~g~~~-~~~~~~~l~~l~l~~N~l~g~--ip~--~~~~ 91 (582)
..+++.|+|++|.+++.+|. ..+..+++|++|+|++|.+++.++ .+..+++|++|||++|++.|. +|. .+++
T Consensus 116 ~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 195 (310)
T 4glp_A 116 GLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHK 195 (310)
T ss_dssp CBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTS
T ss_pred CCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhc
Confidence 56788999999999987652 234578999999999999988886 578899999999999999874 433 3478
Q ss_pred CCcCCeeecccCcccCCCCC------CCCCCCCEEEeecCcccccCCCC-Ccc---cccccccccCCCCC
Q 047954 92 LKFLESLQLQNNNLTGPVPE------FNQSSLKVFNVSNNNLSGSIPKT-QTL---QLFRSYSYSNNPYL 151 (582)
Q Consensus 92 l~~l~~l~l~~N~l~g~ip~------~~~~~l~~l~ls~N~l~g~ip~~-~~~---~~~~~~~~~~n~~l 151 (582)
+++|++|+|++|+++. +|. ..+++|+.|+||+|.+++.+|.. ..+ ..+..+++++|...
T Consensus 196 l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~ 264 (310)
T 4glp_A 196 FPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE 264 (310)
T ss_dssp SCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC
T ss_pred CCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC
Confidence 9999999999999973 332 15689999999999999987754 233 57888899988754
No 335
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.33 E-value=3e-12 Score=123.69 Aligned_cols=128 Identities=18% Similarity=0.231 Sum_probs=107.5
Q ss_pred CeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCc-cccccC-CCCCCCCCCEEeCCC-CcccccccccccCCCcCCe
Q 047954 21 AHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNI-ISGNFM-NFSSNHKLKDIDLSG-NKFYGEISRSLLSLKFLES 97 (582)
Q Consensus 21 ~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~-~~g~~~-~~~~~~~l~~l~l~~-N~l~g~ip~~~~~l~~l~~ 97 (582)
..++.|+|++|++++. |+..++.+++|+.|+|++|. +++..+ .+.++++|+.|+|++ |++++..|..+.++++|++
T Consensus 31 ~~l~~L~l~~n~l~~i-~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~ 109 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTI-PSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKF 109 (239)
T ss_dssp TTCCEEEEESCCCSEE-CTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCE
T ss_pred CcccEEEEeCCcceEE-CHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCE
Confidence 4689999999999975 45568999999999999997 777665 578999999999999 9999777788999999999
Q ss_pred eecccCcccCCCCCC-CCCCCC---EEEeecC-cccccCCC-CCcccccc-cccccCCCC
Q 047954 98 LQLQNNNLTGPVPEF-NQSSLK---VFNVSNN-NLSGSIPK-TQTLQLFR-SYSYSNNPY 150 (582)
Q Consensus 98 l~l~~N~l~g~ip~~-~~~~l~---~l~ls~N-~l~g~ip~-~~~~~~~~-~~~~~~n~~ 150 (582)
|+|++|.+++ +|.+ .+++|+ .|++++| .+++..+. ...+..+. .+++++|..
T Consensus 110 L~l~~n~l~~-lp~~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l 168 (239)
T 2xwt_C 110 LGIFNTGLKM-FPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGF 168 (239)
T ss_dssp EEEEEECCCS-CCCCTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCC
T ss_pred EeCCCCCCcc-ccccccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCC
Confidence 9999999998 8874 667777 9999999 88765443 24567778 888888854
No 336
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.32 E-value=2.7e-12 Score=125.98 Aligned_cols=119 Identities=19% Similarity=0.249 Sum_probs=51.8
Q ss_pred eEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCCCCCCCCCCEEeCCCCcccccccccccCCCcCCeeecc
Q 047954 22 HVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQLQ 101 (582)
Q Consensus 22 ~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~l~ 101 (582)
+++.|+|++|++++.. + +..+++|+.|+|++|.+++ +|.+.. .+|+.|+|++|++++ +| .+.++++|+.|+|+
T Consensus 64 ~L~~L~L~~N~i~~~~-~--l~~l~~L~~L~L~~N~l~~-l~~~~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls 136 (263)
T 1xeu_A 64 NLKELHLSHNQISDLS-P--LKDLTKLEELSVNRNRLKN-LNGIPS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIR 136 (263)
T ss_dssp TCCEEECCSSCCCCCG-G--GTTCSSCCEEECCSSCCSC-CTTCCC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECT
T ss_pred CCCEEECCCCccCCCh-h--hccCCCCCEEECCCCccCC-cCcccc-CcccEEEccCCccCC-Ch-hhcCcccccEEECC
Confidence 3444444444444322 1 4444444444444444444 222222 444444444444443 22 34445555555555
Q ss_pred cCcccCCCCC-CCCCCCCEEEeecCcccccCCCCCcccccccccccCCC
Q 047954 102 NNNLTGPVPE-FNQSSLKVFNVSNNNLSGSIPKTQTLQLFRSYSYSNNP 149 (582)
Q Consensus 102 ~N~l~g~ip~-~~~~~l~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n~ 149 (582)
+|++++. |. ..+++|+.|+|++|.+++. +....+..+..+++++|+
T Consensus 137 ~N~i~~~-~~l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N~ 183 (263)
T 1xeu_A 137 NNKLKSI-VMLGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQK 183 (263)
T ss_dssp TSCCCBC-GGGGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEEE
T ss_pred CCcCCCC-hHHccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCCc
Confidence 5555442 22 1344455555555555443 222333444444444443
No 337
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.31 E-value=4.1e-12 Score=142.03 Aligned_cols=141 Identities=20% Similarity=0.172 Sum_probs=110.4
Q ss_pred CCcceeeeCCC---------CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCC-CCCCCCCCEEeCCC
Q 047954 9 SQWYGIQCDIN---------SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMN-FSSNHKLKDIDLSG 78 (582)
Q Consensus 9 ~~w~gv~c~~~---------~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~-~~~~~~l~~l~l~~ 78 (582)
|.+.-|.|+.. ..+++.|+|++|++++. |+..++.+++|++|+|++|.+++..|. +.++++|++|+|++
T Consensus 4 ~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 82 (680)
T 1ziw_A 4 VSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRL-PAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQH 82 (680)
T ss_dssp CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCC-CGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCS
T ss_pred eECCeeECCCCCccccccccCCCCcEEECCCCCCCCc-CHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCC
Confidence 55666778531 25688999999999975 455688999999999999999988775 67788899999999
Q ss_pred CcccccccccccCCCcCCeeecccCcccCCCCCC--CCCCCCEEEeecCcccccCCCC-CcccccccccccCCCC
Q 047954 79 NKFYGEISRSLLSLKFLESLQLQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKT-QTLQLFRSYSYSNNPY 150 (582)
Q Consensus 79 N~l~g~ip~~~~~l~~l~~l~l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~ 150 (582)
|++++..+..++++++|++|+|++|++++..|.. .+++|++|+|++|.+++..|.. ..+..+..+++++|..
T Consensus 83 n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 157 (680)
T 1ziw_A 83 NELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKI 157 (680)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCC
T ss_pred CccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcc
Confidence 9888654557888999999999999888765543 6788889999999888877654 3566777777777753
No 338
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.31 E-value=2.6e-12 Score=128.05 Aligned_cols=123 Identities=24% Similarity=0.316 Sum_probs=100.9
Q ss_pred CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCCCCCCCCCCEEeCCCCcccccccccccCCCcCCeee
Q 047954 20 SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQ 99 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~ 99 (582)
..+++.|+|++|++++.. + +..+++|+.|+|++|.+++ ++.+..+++|+.|+|++|++++. +.+.++++|+.|+
T Consensus 67 l~~L~~L~L~~n~l~~~~-~--l~~l~~L~~L~l~~n~l~~-~~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~ 140 (291)
T 1h6t_A 67 LPNVTKLFLNGNKLTDIK-P--LANLKNLGWLFLDENKVKD-LSSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLY 140 (291)
T ss_dssp CTTCCEEECCSSCCCCCG-G--GTTCTTCCEEECCSSCCCC-GGGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEE
T ss_pred CCCCCEEEccCCccCCCc-c--cccCCCCCEEECCCCcCCC-ChhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEE
Confidence 467899999999998754 3 7899999999999999987 56688889999999999999873 4688899999999
Q ss_pred cccCcccCCCCCC-CCCCCCEEEeecCcccccCCCCCcccccccccccCCCC
Q 047954 100 LQNNNLTGPVPEF-NQSSLKVFNVSNNNLSGSIPKTQTLQLFRSYSYSNNPY 150 (582)
Q Consensus 100 l~~N~l~g~ip~~-~~~~l~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~ 150 (582)
|++|++++. +.. .+++|+.|+|++|.+++..| ...+..+..+++++|..
T Consensus 141 l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~L~~N~i 190 (291)
T 1h6t_A 141 LGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHI 190 (291)
T ss_dssp CCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCC
T ss_pred ccCCcCCcc-hhhccCCCCCEEEccCCccccchh-hcCCCccCEEECCCCcC
Confidence 999999875 443 67889999999999887655 55677788888888854
No 339
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.31 E-value=1.3e-12 Score=146.60 Aligned_cols=127 Identities=18% Similarity=0.179 Sum_probs=107.0
Q ss_pred CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccC-CCCCCCCCCEEeCCCCcccccccccccCCCcCCee
Q 047954 20 SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFM-NFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESL 98 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~-~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l 98 (582)
...+..|+|++|.+. .||.. +..+++|+.|+|++|.|+ .+| .++++++|++|||++|.|+ .||.+|++|++|++|
T Consensus 223 l~~L~~L~Ls~n~l~-~l~~~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L 298 (727)
T 4b8c_D 223 DQLWHALDLSNLQIF-NISAN-IFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYF 298 (727)
T ss_dssp CCCCCEEECTTSCCS-CCCGG-GGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEE
T ss_pred CCCCcEEECCCCCCC-CCChh-hcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEE
Confidence 466889999999998 78765 568999999999999999 666 5889999999999999999 899999999999999
Q ss_pred ecccCcccCCCCCC--CCCCCCEEEeecCcccccCCCCCcccc--cccccccCCCCC
Q 047954 99 QLQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKTQTLQL--FRSYSYSNNPYL 151 (582)
Q Consensus 99 ~l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~~~~~~--~~~~~~~~n~~l 151 (582)
+|++|.|+ .||.. .+++|+.|+|++|.|+|.+|....... ...+.+.+|...
T Consensus 299 ~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~ 354 (727)
T 4b8c_D 299 YFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPE 354 (727)
T ss_dssp ECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred ECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCccc
Confidence 99999997 88874 789999999999999999986532211 122456666543
No 340
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.30 E-value=3.7e-12 Score=139.60 Aligned_cols=123 Identities=24% Similarity=0.329 Sum_probs=91.2
Q ss_pred CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCCCCCCCCCCEEeCCCCcccccccccccCCCcCCeee
Q 047954 20 SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQ 99 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~ 99 (582)
..++..|+|++|++++..| +..|++|+.|+|++|.|++ +|.+..+++|+.|+|++|.|++ + +.+..|++|+.|+
T Consensus 64 l~~L~~L~Ls~N~l~~~~~---l~~l~~L~~L~Ls~N~l~~-l~~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~ 137 (605)
T 1m9s_A 64 LPNVTKLFLNGNKLTDIKP---LTNLKNLGWLFLDENKIKD-LSSLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLY 137 (605)
T ss_dssp CTTCCEEECTTSCCCCCGG---GGGCTTCCEEECCSSCCCC-CTTSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEE
T ss_pred CCCCCEEEeeCCCCCCChh---hccCCCCCEEECcCCCCCC-ChhhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEE
Confidence 4568888888888887543 7788888888888888876 5677778888888888888876 3 3577788888888
Q ss_pred cccCcccCCCCCC-CCCCCCEEEeecCcccccCCCCCcccccccccccCCCC
Q 047954 100 LQNNNLTGPVPEF-NQSSLKVFNVSNNNLSGSIPKTQTLQLFRSYSYSNNPY 150 (582)
Q Consensus 100 l~~N~l~g~ip~~-~~~~l~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~ 150 (582)
|++|.|++. +.. .+++|+.|+|++|.|++..| ...+..|..+++++|..
T Consensus 138 Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~i 187 (605)
T 1m9s_A 138 LGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHI 187 (605)
T ss_dssp CCSSCCCCC-GGGGSCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCC
T ss_pred CCCCccCCc-hhhcccCCCCEEECcCCcCCCchh-hccCCCCCEEECcCCCC
Confidence 888888765 433 67778888888888877666 45566677777777743
No 341
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.30 E-value=5e-12 Score=126.02 Aligned_cols=122 Identities=19% Similarity=0.279 Sum_probs=101.9
Q ss_pred CeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCCCCCCCCCCEEeCCCCcccccccccccCCCcCCeeec
Q 047954 21 AHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQL 100 (582)
Q Consensus 21 ~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~l 100 (582)
.+++.|++++|+++.. + .++.+++|+.|+|++|.+++..+ +..+++|+.|+|++|.+++ +| .+.++++|++|+|
T Consensus 46 ~~L~~L~l~~~~i~~~-~--~~~~l~~L~~L~L~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L 119 (291)
T 1h6t_A 46 NSIDQIIANNSDIKSV-Q--GIQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSL 119 (291)
T ss_dssp HTCCEEECTTSCCCCC-T--TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEEC
T ss_pred CcccEEEccCCCcccC-h--hHhcCCCCCEEEccCCccCCCcc-cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEEC
Confidence 4578999999998753 3 37889999999999999998766 8899999999999999987 44 4899999999999
Q ss_pred ccCcccCCCCCC-CCCCCCEEEeecCcccccCCCCCcccccccccccCCCC
Q 047954 101 QNNNLTGPVPEF-NQSSLKVFNVSNNNLSGSIPKTQTLQLFRSYSYSNNPY 150 (582)
Q Consensus 101 ~~N~l~g~ip~~-~~~~l~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~ 150 (582)
++|++++ +|.. .+++|+.|++++|.+++. +....+..+..+++++|..
T Consensus 120 ~~n~i~~-~~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l 168 (291)
T 1h6t_A 120 EHNGISD-INGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQI 168 (291)
T ss_dssp TTSCCCC-CGGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCC
T ss_pred CCCcCCC-ChhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCcc
Confidence 9999987 4543 788999999999999875 5555677888888888854
No 342
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.30 E-value=7.6e-12 Score=135.69 Aligned_cols=114 Identities=24% Similarity=0.312 Sum_probs=88.9
Q ss_pred CeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCCCCCCCCCCEEeCCCCcccccccccccCCCcCCeeec
Q 047954 21 AHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQL 100 (582)
Q Consensus 21 ~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~l 100 (582)
.+++.|+|++|+|+ .|| ..+++|+.|+|++|.|++ +|.+.+ +|+.|+|++|+|++ ||. .+++|+.|+|
T Consensus 80 ~~L~~L~Ls~N~l~-~ip----~~l~~L~~L~Ls~N~l~~-ip~l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 147 (571)
T 3cvr_A 80 PQITVLEITQNALI-SLP----ELPASLEYLDACDNRLST-LPELPA--SLKHLDVDNNQLTM-LPE---LPALLEYINA 147 (571)
T ss_dssp TTCSEEECCSSCCS-CCC----CCCTTCCEEECCSSCCSC-CCCCCT--TCCEEECCSSCCSC-CCC---CCTTCCEEEC
T ss_pred CCCCEEECcCCCCc-ccc----cccCCCCEEEccCCCCCC-cchhhc--CCCEEECCCCcCCC-CCC---cCccccEEeC
Confidence 46888999999988 676 347888899999999888 666544 88888888888887 777 6788888888
Q ss_pred ccCcccCCCCCCCCCCCCEEEeecCcccccCCCCCcccccccccccCCCCC
Q 047954 101 QNNNLTGPVPEFNQSSLKVFNVSNNNLSGSIPKTQTLQLFRSYSYSNNPYL 151 (582)
Q Consensus 101 ~~N~l~g~ip~~~~~~l~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~l 151 (582)
++|+|++ ||. .+++|+.|+|++|.|++ +|. .. ..+..+++++|...
T Consensus 148 s~N~l~~-lp~-~l~~L~~L~Ls~N~L~~-lp~-l~-~~L~~L~Ls~N~L~ 193 (571)
T 3cvr_A 148 DNNQLTM-LPE-LPTSLEVLSVRNNQLTF-LPE-LP-ESLEALDVSTNLLE 193 (571)
T ss_dssp CSSCCSC-CCC-CCTTCCEEECCSSCCSC-CCC-CC-TTCCEEECCSSCCS
T ss_pred CCCccCc-CCC-cCCCcCEEECCCCCCCC-cch-hh-CCCCEEECcCCCCC
Confidence 8888887 777 67788888888888887 776 22 66777777777543
No 343
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.30 E-value=1.1e-11 Score=125.88 Aligned_cols=137 Identities=21% Similarity=0.227 Sum_probs=87.9
Q ss_pred CCcceeeeCCC---------CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccC-CCCCCCCCCEEeCCC
Q 047954 9 SQWYGIQCDIN---------SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFM-NFSSNHKLKDIDLSG 78 (582)
Q Consensus 9 ~~w~gv~c~~~---------~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~-~~~~~~~l~~l~l~~ 78 (582)
|.|..+.|+.. ...++.|+|++|++++.. +..++.+++|++|+|++|.+++..| .+.++++|++|+|++
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELR-KDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEEC-TTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccC-HhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 46777777531 135677777777777544 3457777777777777777777655 466777777777777
Q ss_pred CcccccccccccCCCcCCeeecccCcccCCCCC--CCCCCCCEEEeecCccc--ccCCCCCcccccccccccCCC
Q 047954 79 NKFYGEISRSLLSLKFLESLQLQNNNLTGPVPE--FNQSSLKVFNVSNNNLS--GSIPKTQTLQLFRSYSYSNNP 149 (582)
Q Consensus 79 N~l~g~ip~~~~~l~~l~~l~l~~N~l~g~ip~--~~~~~l~~l~ls~N~l~--g~ip~~~~~~~~~~~~~~~n~ 149 (582)
|.++ .+|..+. ++|++|+|++|++++..+. ..+++|+.|++++|.++ |..|.......+..+++++|.
T Consensus 112 n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~ 183 (332)
T 2ft3_A 112 NHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAK 183 (332)
T ss_dssp SCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSB
T ss_pred CcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCC
Confidence 7777 6666655 6777777777777754333 25677777777777775 234433211155556666664
No 344
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.29 E-value=5.5e-12 Score=141.01 Aligned_cols=134 Identities=22% Similarity=0.284 Sum_probs=101.8
Q ss_pred CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCcccccc---------CCCCCCCCCCEEeCCCCcccccccc-cc
Q 047954 20 SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNF---------MNFSSNHKLKDIDLSGNKFYGEISR-SL 89 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~---------~~~~~~~~l~~l~l~~N~l~g~ip~-~~ 89 (582)
...++.|+|++|++++ +|+..+..+++|++|+|++|.+++.. ..+.++++|+.|+|++|+++ .||. .+
T Consensus 479 l~~L~~L~Ls~N~l~~-i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~-~i~~~~~ 556 (680)
T 1ziw_A 479 LRNLTILDLSNNNIAN-INDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD-EIPVEVF 556 (680)
T ss_dssp CTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCC-CCCTTTT
T ss_pred CCCCCEEECCCCCCCc-CChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCC-CCCHHHc
Confidence 3567788888888885 44556788888888888888887642 12677788888888888888 5665 57
Q ss_pred cCCCcCCeeecccCcccCCCCCC--CCCCCCEEEeecCcccccCCCCC--cccccccccccCCCCCCCCC
Q 047954 90 LSLKFLESLQLQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKTQ--TLQLFRSYSYSNNPYLCGPP 155 (582)
Q Consensus 90 ~~l~~l~~l~l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~~--~~~~~~~~~~~~n~~l~~~~ 155 (582)
.++++|+.|+|++|++++-.|.. .+++|+.|+|++|.|++..|... .+..+..+++++|++.|...
T Consensus 557 ~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 557 KDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred ccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 88889999999999998543332 56889999999999988666432 46778888999999988653
No 345
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.29 E-value=2.4e-12 Score=140.02 Aligned_cols=129 Identities=18% Similarity=0.272 Sum_probs=109.6
Q ss_pred CCCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCC-CCCCCCCCEEeCCCCcccc-cccccccCCCcCC
Q 047954 19 NSAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMN-FSSNHKLKDIDLSGNKFYG-EISRSLLSLKFLE 96 (582)
Q Consensus 19 ~~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~-~~~~~~l~~l~l~~N~l~g-~ip~~~~~l~~l~ 96 (582)
...+++.|+|++|++++..| ..++.+++|++|+|++|.+++.+|. +.++++|++|+|++|.+++ .+|..++++++|+
T Consensus 48 ~l~~L~~L~Ls~n~i~~~~~-~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~ 126 (549)
T 2z81_A 48 ACANLQVLILKSSRINTIEG-DAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQ 126 (549)
T ss_dssp SCTTCCEEECTTSCCCEECT-TTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCC
T ss_pred cCCcccEEECCCCCcCccCh-hhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCcc
Confidence 35679999999999998664 5689999999999999999998886 8999999999999999998 6788999999999
Q ss_pred eeecccCcccCCCCCC---CCCCCCEEEeecCcccccCCCC-CcccccccccccCC
Q 047954 97 SLQLQNNNLTGPVPEF---NQSSLKVFNVSNNNLSGSIPKT-QTLQLFRSYSYSNN 148 (582)
Q Consensus 97 ~l~l~~N~l~g~ip~~---~~~~l~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n 148 (582)
+|+|++|++.+.+|.. .+++|+.|++++|.+++.+|.. ..+..+..+.+.+|
T Consensus 127 ~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n 182 (549)
T 2z81_A 127 TLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLS 182 (549)
T ss_dssp EEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECS
T ss_pred EEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccC
Confidence 9999999988888852 6789999999999999988865 23444444444444
No 346
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.28 E-value=1e-11 Score=113.26 Aligned_cols=105 Identities=17% Similarity=0.161 Sum_probs=89.6
Q ss_pred CcEEEccCCccccccCCCCCCCCCCEEeCCCCcccccccccccCCCcCCeeecccCcccCCCCCC--CCCCCCEEEeecC
Q 047954 48 LIVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQLQNNNLTGPVPEF--NQSSLKVFNVSNN 125 (582)
Q Consensus 48 L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~l~~N~l~g~ip~~--~~~~l~~l~ls~N 125 (582)
.+.+++++|.|+.....+. .+|+.|+|++|++++..|..+.++++|++|+|++|+|++..|.. .+++|+.|+|++|
T Consensus 11 ~~~l~~s~n~l~~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 11 GTTVDCSGKSLASVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCEEEeCCCCcCccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 4789999999988544443 78999999999999999999999999999999999999766553 6899999999999
Q ss_pred cccccCCC-CCcccccccccccCCCCCCCC
Q 047954 126 NLSGSIPK-TQTLQLFRSYSYSNNPYLCGP 154 (582)
Q Consensus 126 ~l~g~ip~-~~~~~~~~~~~~~~n~~l~~~ 154 (582)
+|++..|. ...+..+..+++++|+..|..
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 99986664 356788999999999987653
No 347
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.27 E-value=1.4e-11 Score=125.09 Aligned_cols=144 Identities=18% Similarity=0.211 Sum_probs=102.3
Q ss_pred CCCCCCCCcceeeeCCC---------CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccC-CCCCCCCCC
Q 047954 3 CFKDFPSQWYGIQCDIN---------SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFM-NFSSNHKLK 72 (582)
Q Consensus 3 ~~~~~~~~w~gv~c~~~---------~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~-~~~~~~~l~ 72 (582)
|..+-.|.|..+.|+.. ...++.|+|++|++++.. +..++.+++|++|+|++|.+++..| .+.++++|+
T Consensus 25 cp~~c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 103 (330)
T 1xku_A 25 CPFRCQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIK-DGDFKNLKNLHTLILINNKISKISPGAFAPLVKLE 103 (330)
T ss_dssp CCTTCEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBC-TTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCC
T ss_pred CCCCCcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeC-hhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCC
Confidence 44443457888888631 235678888888888644 4457888888888888888888765 577888888
Q ss_pred EEeCCCCcccccccccccCCCcCCeeecccCcccCCCCC--CCCCCCCEEEeecCcccc--cCCCC-CcccccccccccC
Q 047954 73 DIDLSGNKFYGEISRSLLSLKFLESLQLQNNNLTGPVPE--FNQSSLKVFNVSNNNLSG--SIPKT-QTLQLFRSYSYSN 147 (582)
Q Consensus 73 ~l~l~~N~l~g~ip~~~~~l~~l~~l~l~~N~l~g~ip~--~~~~~l~~l~ls~N~l~g--~ip~~-~~~~~~~~~~~~~ 147 (582)
+|+|++|.++ .+|..+. ++|++|+|++|.+++..|. ..+++|+.|++++|.+.. ..|.. ..+..+..+.+++
T Consensus 104 ~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~ 180 (330)
T 1xku_A 104 RLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIAD 180 (330)
T ss_dssp EEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCS
T ss_pred EEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCC
Confidence 8888888887 6777665 6788888888888865554 267788888888888753 44432 3355666677776
Q ss_pred CCC
Q 047954 148 NPY 150 (582)
Q Consensus 148 n~~ 150 (582)
|..
T Consensus 181 n~l 183 (330)
T 1xku_A 181 TNI 183 (330)
T ss_dssp SCC
T ss_pred Ccc
Confidence 643
No 348
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.27 E-value=1.2e-11 Score=135.93 Aligned_cols=126 Identities=20% Similarity=0.125 Sum_probs=106.4
Q ss_pred CeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCC-CCCCCCCCEEeCCCCcccccccccccCCCcCCeee
Q 047954 21 AHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMN-FSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQ 99 (582)
Q Consensus 21 ~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~-~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~ 99 (582)
..+..|+|++|++++..| ..++.+++|+.|+|++|.+++.+|. ++++++|++|+|++|.|++..|..++++++|++|+
T Consensus 75 ~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 153 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDT-YAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 153 (597)
T ss_dssp CCCSEEECTTSCCCEECT-TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEECCCCCCCCCCh-HHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEE
Confidence 568899999999998664 4689999999999999999998875 68999999999999999965555579999999999
Q ss_pred cccCcccCCCCCC--CCCCCCEEEeecCcccccCCCCCcccccccccccCCC
Q 047954 100 LQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKTQTLQLFRSYSYSNNP 149 (582)
Q Consensus 100 l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n~ 149 (582)
|++|.+++..|.. .+++|+.|+|++|.+++. | ...+..+..+++++|.
T Consensus 154 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~l~~L~~L~l~~n~ 203 (597)
T 3oja_B 154 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV-D-LSLIPSLFHANVSYNL 203 (597)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC-C-GGGCTTCSEEECCSSC
T ss_pred eeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc-C-hhhhhhhhhhhcccCc
Confidence 9999999988863 789999999999999874 2 2345566666777664
No 349
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.27 E-value=6.6e-12 Score=126.74 Aligned_cols=127 Identities=20% Similarity=0.089 Sum_probs=100.7
Q ss_pred CeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccC-CCCCCCCCCEEeCCCCccccccccccc-CCCcCCee
Q 047954 21 AHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFM-NFSSNHKLKDIDLSGNKFYGEISRSLL-SLKFLESL 98 (582)
Q Consensus 21 ~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~-~~~~~~~l~~l~l~~N~l~g~ip~~~~-~l~~l~~l 98 (582)
+.++.|+|++|++++..+ ..+++|+.|+|++|.+++..+ .+..+++|+.|+|++|.+++..|..+. ++++|++|
T Consensus 99 ~~L~~L~l~~n~l~~~~~----~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L 174 (317)
T 3o53_A 99 PSIETLHAANNNISRVSC----SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHL 174 (317)
T ss_dssp TTCCEEECCSSCCSEEEE----CCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEE
T ss_pred CCcCEEECCCCccCCcCc----cccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEE
Confidence 567778888888877543 246889999999999998776 577888999999999999988887774 78899999
Q ss_pred ecccCcccCCCCCCCCCCCCEEEeecCcccccCCCCCcccccccccccCCCCC
Q 047954 99 QLQNNNLTGPVPEFNQSSLKVFNVSNNNLSGSIPKTQTLQLFRSYSYSNNPYL 151 (582)
Q Consensus 99 ~l~~N~l~g~ip~~~~~~l~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~l 151 (582)
+|++|.+++.-+...+++|+.|+|++|.+++..|....+..+..+++++|...
T Consensus 175 ~L~~N~l~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~ 227 (317)
T 3o53_A 175 NLQYNFIYDVKGQVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLV 227 (317)
T ss_dssp ECTTSCCCEEECCCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCC
T ss_pred ECCCCcCcccccccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCccc
Confidence 99999988763334688899999999999876555556677888888888654
No 350
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.27 E-value=1.7e-11 Score=129.60 Aligned_cols=140 Identities=16% Similarity=0.193 Sum_probs=113.2
Q ss_pred CcceeeeCCC---------CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccC-CCCCCCCCCEEeCCCC
Q 047954 10 QWYGIQCDIN---------SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFM-NFSSNHKLKDIDLSGN 79 (582)
Q Consensus 10 ~w~gv~c~~~---------~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~-~~~~~~~l~~l~l~~N 79 (582)
.|..|.|... ...++.|+|++|++++..+ ..+..+++|+.|+|++|.+++..+ .+.++++|+.|+|++|
T Consensus 44 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~-~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 44 QFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKV-NSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp TSCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECT-TTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCH-HHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 3678999631 2457889999999997664 568999999999999999998775 5788999999999999
Q ss_pred cccccccccccCCCcCCeeecccCcccCCCCCC--CCCCCCEEEeecCcccccCCCC--CcccccccccccCCCC
Q 047954 80 KFYGEISRSLLSLKFLESLQLQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKT--QTLQLFRSYSYSNNPY 150 (582)
Q Consensus 80 ~l~g~ip~~~~~l~~l~~l~l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~--~~~~~~~~~~~~~n~~ 150 (582)
+|++..+..+..+++|++|+|++|.+++..+.. .+++|+.|+|++|+..+.+|.. ..+..+..+++++|..
T Consensus 123 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l 197 (440)
T 3zyj_A 123 RLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNL 197 (440)
T ss_dssp CCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCC
T ss_pred cCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcC
Confidence 999766778999999999999999998544432 6788999999997777777753 4567778888888854
No 351
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.26 E-value=1.7e-11 Score=112.34 Aligned_cols=104 Identities=17% Similarity=0.191 Sum_probs=87.2
Q ss_pred cEEEccCCccccccCCCCCCCCCCEEeCCCCcccccccccccCCCcCCeeecccCcccCCCCCC--CCCCCCEEEeecCc
Q 047954 49 IVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQLQNNNLTGPVPEF--NQSSLKVFNVSNNN 126 (582)
Q Consensus 49 ~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~l~~N~l~g~ip~~--~~~~l~~l~ls~N~ 126 (582)
+.+++++|.|+.....+. .+|+.|+|++|+|++.+|..+.++++|++|+|++|+|++..+.. .+++|+.|+|++|+
T Consensus 15 ~~l~~~~n~l~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 15 TLVNCQNIRLASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp SEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred cEEEeCCCCCCccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 689999999954333343 78999999999999999999999999999999999999854442 68999999999999
Q ss_pred ccccCCC-CCcccccccccccCCCCCCCC
Q 047954 127 LSGSIPK-TQTLQLFRSYSYSNNPYLCGP 154 (582)
Q Consensus 127 l~g~ip~-~~~~~~~~~~~~~~n~~l~~~ 154 (582)
|++..|. ...+..+..+++++|+..|.+
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred cceeCHHHhccccCCCEEEeCCCCccccc
Confidence 9975554 356788899999999887643
No 352
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.26 E-value=1.1e-11 Score=135.86 Aligned_cols=122 Identities=19% Similarity=0.295 Sum_probs=65.1
Q ss_pred CeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCCCCCCCCCCEEeCCCCcccccccccccCCCcCCeeec
Q 047954 21 AHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQL 100 (582)
Q Consensus 21 ~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~l 100 (582)
.++..|+|++|++++ +| .+..|++|+.|+|++|.|++ ++.+..+++|+.|+|++|.|++. ..+..|++|+.|+|
T Consensus 87 ~~L~~L~Ls~N~l~~-l~--~l~~l~~L~~L~Ls~N~l~~-l~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~L 160 (605)
T 1m9s_A 87 KNLGWLFLDENKIKD-LS--SLKDLKKLKSLSLEHNGISD-INGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSL 160 (605)
T ss_dssp TTCCEEECCSSCCCC-CT--TSTTCTTCCEEECTTSCCCC-CGGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEEC
T ss_pred CCCCEEECcCCCCCC-Ch--hhccCCCCCEEEecCCCCCC-CccccCCCccCEEECCCCccCCc--hhhcccCCCCEEEC
Confidence 345555555555554 22 25555555555555555554 34455555555555555555543 34555555555555
Q ss_pred ccCcccCCCCCCCCCCCCEEEeecCcccccCCCCCcccccccccccCCC
Q 047954 101 QNNNLTGPVPEFNQSSLKVFNVSNNNLSGSIPKTQTLQLFRSYSYSNNP 149 (582)
Q Consensus 101 ~~N~l~g~ip~~~~~~l~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n~ 149 (582)
++|.|++..|-..+++|+.|+|++|.|++ +|....+..|..+++++|+
T Consensus 161 s~N~l~~~~~l~~l~~L~~L~Ls~N~i~~-l~~l~~l~~L~~L~L~~N~ 208 (605)
T 1m9s_A 161 EDNQISDIVPLAGLTKLQNLYLSKNHISD-LRALAGLKNLDVLELFSQE 208 (605)
T ss_dssp CSSCCCCCGGGTTCTTCCEEECCSSCCCB-CGGGTTCTTCSEEECCSEE
T ss_pred cCCcCCCchhhccCCCCCEEECcCCCCCC-ChHHccCCCCCEEEccCCc
Confidence 55555555553345555555555555554 2433444455555555554
No 353
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.26 E-value=6.9e-12 Score=126.06 Aligned_cols=126 Identities=20% Similarity=0.251 Sum_probs=102.0
Q ss_pred CCCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCCCCCCCCCCEEeCCCCcccccccccccCCCcCCee
Q 047954 19 NSAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESL 98 (582)
Q Consensus 19 ~~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l 98 (582)
...+++.|+|++|.+++ +| .+..+++|+.|+|++|.+++. +.+..+++|+.|+|++|.+++..| +.++++|+.|
T Consensus 83 ~l~~L~~L~L~~n~l~~-~~--~~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L 156 (308)
T 1h6u_A 83 NLTKITELELSGNPLKN-VS--AIAGLQSIKTLDLTSTQITDV-TPLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYL 156 (308)
T ss_dssp TCCSCCEEECCSCCCSC-CG--GGTTCTTCCEEECTTSCCCCC-GGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEE
T ss_pred cCCCCCEEEccCCcCCC-ch--hhcCCCCCCEEECCCCCCCCc-hhhcCCCCCCEEECCCCccCcCcc--ccCCCCccEE
Confidence 35678999999999987 33 488899999999999999884 558888999999999999987554 8889999999
Q ss_pred ecccCcccCCCCCCCCCCCCEEEeecCcccccCCCCCcccccccccccCCCCC
Q 047954 99 QLQNNNLTGPVPEFNQSSLKVFNVSNNNLSGSIPKTQTLQLFRSYSYSNNPYL 151 (582)
Q Consensus 99 ~l~~N~l~g~ip~~~~~~l~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~l 151 (582)
+|++|++++..|-..+++|+.|+|++|.+++..| ...+..+..+++++|...
T Consensus 157 ~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L~~N~l~ 208 (308)
T 1h6u_A 157 SIGNAQVSDLTPLANLSKLTTLKADDNKISDISP-LASLPNLIEVHLKNNQIS 208 (308)
T ss_dssp ECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECTTSCCC
T ss_pred EccCCcCCCChhhcCCCCCCEEECCCCccCcChh-hcCCCCCCEEEccCCccC
Confidence 9999999875553477889999999999986443 455677788888888643
No 354
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.25 E-value=9.9e-12 Score=129.19 Aligned_cols=128 Identities=17% Similarity=0.244 Sum_probs=109.9
Q ss_pred CeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccC-CCCCCCCCCEEeCCCCcccccccccccCCCcCCeee
Q 047954 21 AHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFM-NFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQ 99 (582)
Q Consensus 21 ~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~-~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~ 99 (582)
..+..|++++|.++ .+|+..+..+++|++|+|++|.+++..+ .+..+++|++|+|++|.+++..|..++++++|++|+
T Consensus 45 ~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 45 NNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp CCCSEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEecCCchh-hCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 55778899988876 4777778899999999999999998876 688999999999999999998888999999999999
Q ss_pred cccCcccCCCCCC---CCCCCCEEEeecCcccccCCCC-CcccccccccccCCCC
Q 047954 100 LQNNNLTGPVPEF---NQSSLKVFNVSNNNLSGSIPKT-QTLQLFRSYSYSNNPY 150 (582)
Q Consensus 100 l~~N~l~g~ip~~---~~~~l~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~ 150 (582)
|++|+++ .+|.. .+++|+.|+|++|.+++..|.. ..+..+..+++++|..
T Consensus 124 L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 177 (390)
T 3o6n_A 124 LERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRL 177 (390)
T ss_dssp CCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCC
T ss_pred CCCCccC-cCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcC
Confidence 9999999 56652 6889999999999999876653 4577888888888864
No 355
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.25 E-value=3.4e-14 Score=133.31 Aligned_cols=129 Identities=20% Similarity=0.270 Sum_probs=107.8
Q ss_pred CCeEEEEEeCCCcceeccCc-----cccCCCCCCcEEEccCCccccccCCCCCCCCCCEEeCCCCcccccccccccCCCc
Q 047954 20 SAHVTGIVLEDMRLNGEIKS-----DAFADIPELIVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGEISRSLLSLKF 94 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~-----~~~~~l~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~ 94 (582)
...++.++|+.+.|+|.+|+ ..++.+++|++|+|++|.+++ +|.+..+++|+.|+|++|.++ .+|..+..+++
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-ISSLSGMENLRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CCCHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-ccccccCCCCCEEECCCCCcc-cccchhhcCCc
Confidence 35688889999999999875 247889999999999999998 778888999999999999999 78998888999
Q ss_pred CCeeecccCcccCCCCCC-CCCCCCEEEeecCccccc--CCCCCcccccccccccCCCCC
Q 047954 95 LESLQLQNNNLTGPVPEF-NQSSLKVFNVSNNNLSGS--IPKTQTLQLFRSYSYSNNPYL 151 (582)
Q Consensus 95 l~~l~l~~N~l~g~ip~~-~~~~l~~l~ls~N~l~g~--ip~~~~~~~~~~~~~~~n~~l 151 (582)
|++|+|++|++++ +|.. .+++|+.|+|++|.+++. ++....+..+..+++++|+..
T Consensus 95 L~~L~L~~N~l~~-l~~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~ 153 (198)
T 1ds9_A 95 LEELWISYNQIAS-LSGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp CSEEEEEEEECCC-HHHHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHH
T ss_pred CCEEECcCCcCCc-CCccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccc
Confidence 9999999999997 6653 678899999999999852 223345667788888888643
No 356
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.24 E-value=2e-11 Score=119.58 Aligned_cols=140 Identities=16% Similarity=0.078 Sum_probs=105.1
Q ss_pred ccccccCceEEEEEEEcCCceEEEEEecCCCcchHHHHHHHHHHHhcCC-CCCccccceEEEeCCeeEEEEEeCCCCChH
Q 047954 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQK-HPNLLPLLAYYFSNDEKLLVYKFAGNGNLF 352 (582)
Q Consensus 274 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 352 (582)
..++.|+++.||++... +..+++|............+.+|+.+++.+. |..+.++++++...+..++||||++|.+|.
T Consensus 20 ~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~ 98 (263)
T 3tm0_A 20 KDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCS 98 (263)
T ss_dssp ECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHH
T ss_pred eeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehh
Confidence 34677888999999755 5779999986421122345888999998884 677889999999888999999999999987
Q ss_pred HHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCC----------------------------------------
Q 047954 353 NRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKS---------------------------------------- 392 (582)
Q Consensus 353 ~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~---------------------------------------- 392 (582)
+.+. +......++.+++++|..||+....
T Consensus 99 ~~~~-----------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (263)
T 3tm0_A 99 EEYE-----------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDP 167 (263)
T ss_dssp HHCC-----------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSH
T ss_pred hccC-----------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCH
Confidence 7531 1122346788999999999982110
Q ss_pred ------------CCCCcceecCCCCCCeeecCCCceEEeeccccc
Q 047954 393 ------------RTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSS 425 (582)
Q Consensus 393 ------------~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~ 425 (582)
.....++|+|+++.|||++++..+.|+||+.+.
T Consensus 168 ~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 168 RELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 011458999999999999876566799998763
No 357
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.24 E-value=1.5e-11 Score=120.53 Aligned_cols=122 Identities=16% Similarity=0.220 Sum_probs=101.9
Q ss_pred CeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCCCCCCCCCCEEeCCCCcccccccccccCCCcCCeeec
Q 047954 21 AHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQL 100 (582)
Q Consensus 21 ~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~l 100 (582)
.+++.|+|++|+++ .+| .++.+++|+.|+|++|.+++..+ +..+++|+.|+|++|++++ +|.... ++|+.|+|
T Consensus 41 ~~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~L~~N~i~~~~~-l~~l~~L~~L~L~~N~l~~-l~~~~~--~~L~~L~L 113 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQ-SLA--GMQFFTNLKELHLSHNQISDLSP-LKDLTKLEELSVNRNRLKN-LNGIPS--ACLSRLFL 113 (263)
T ss_dssp TTCSEEECTTSCCC-CCT--TGGGCTTCCEEECCSSCCCCCGG-GTTCSSCCEEECCSSCCSC-CTTCCC--SSCCEEEC
T ss_pred CcCcEEECcCCCcc-cch--HHhhCCCCCEEECCCCccCCChh-hccCCCCCEEECCCCccCC-cCcccc--CcccEEEc
Confidence 56889999999998 465 48889999999999999998777 8899999999999999987 554333 89999999
Q ss_pred ccCcccCCCCCC-CCCCCCEEEeecCcccccCCCCCcccccccccccCCCCC
Q 047954 101 QNNNLTGPVPEF-NQSSLKVFNVSNNNLSGSIPKTQTLQLFRSYSYSNNPYL 151 (582)
Q Consensus 101 ~~N~l~g~ip~~-~~~~l~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~l 151 (582)
++|++++ +|.. .+++|+.|+|++|++++. |....+..+..+++++|...
T Consensus 114 ~~N~l~~-~~~l~~l~~L~~L~Ls~N~i~~~-~~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 114 DNNELRD-TDSLIHLKNLEILSIRNNKLKSI-VMLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp CSSCCSB-SGGGTTCTTCCEEECTTSCCCBC-GGGGGCTTCCEEECTTSCCC
T ss_pred cCCccCC-ChhhcCcccccEEECCCCcCCCC-hHHccCCCCCEEECCCCcCc
Confidence 9999997 4543 789999999999999874 55556778888899988643
No 358
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.24 E-value=1.6e-11 Score=123.37 Aligned_cols=122 Identities=17% Similarity=0.321 Sum_probs=69.5
Q ss_pred CeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCCCCCCCCCCEEeCCCCcccccccccccCCCcCCeeec
Q 047954 21 AHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQL 100 (582)
Q Consensus 21 ~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~l 100 (582)
.+++.|+|++|++++.. + +..+++|++|+|++|.+++ ++.+..+++|+.|+|++|.+++ +|. +..+++|++|+|
T Consensus 63 ~~L~~L~L~~n~i~~~~-~--~~~l~~L~~L~L~~n~l~~-~~~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l 136 (308)
T 1h6u_A 63 NNLIGLELKDNQITDLA-P--LKNLTKITELELSGNPLKN-VSAIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYL 136 (308)
T ss_dssp TTCCEEECCSSCCCCCG-G--GTTCCSCCEEECCSCCCSC-CGGGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCCCh-h--HccCCCCCEEEccCCcCCC-chhhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEEC
Confidence 44566666666665432 2 5566666666666666655 3455556666666666666654 332 566666666666
Q ss_pred ccCcccCCCCCCCCCCCCEEEeecCcccccCCCCCcccccccccccCCC
Q 047954 101 QNNNLTGPVPEFNQSSLKVFNVSNNNLSGSIPKTQTLQLFRSYSYSNNP 149 (582)
Q Consensus 101 ~~N~l~g~ip~~~~~~l~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n~ 149 (582)
++|.+++..|-..+++|+.|+|++|.+++..| ...+..+..+++++|.
T Consensus 137 ~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~ 184 (308)
T 1h6u_A 137 DLNQITNISPLAGLTNLQYLSIGNAQVSDLTP-LANLSKLTTLKADDNK 184 (308)
T ss_dssp CSSCCCCCGGGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSC
T ss_pred CCCccCcCccccCCCCccEEEccCCcCCCChh-hcCCCCCCEEECCCCc
Confidence 66666654433355666666666666654322 3344555556666554
No 359
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.24 E-value=1.4e-11 Score=131.53 Aligned_cols=130 Identities=18% Similarity=0.187 Sum_probs=107.8
Q ss_pred CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCC-CCCCCCCCEEeCCCCcccccccccccCCCcCCee
Q 047954 20 SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMN-FSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESL 98 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~-~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l 98 (582)
..+++.|+|++|.+++..| ..++.+++|++|+|++|.+++..+. +.++++|+.|+|++|.+++.+|..+.++++|+.|
T Consensus 55 l~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 133 (477)
T 2id5_A 55 FPHLEELELNENIVSAVEP-GAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSL 133 (477)
T ss_dssp CTTCCEEECTTSCCCEECT-TTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCccCEeCh-hhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEE
Confidence 4678999999999998765 4589999999999999999977664 6889999999999999999999999999999999
Q ss_pred ecccCcccCCCCCC--CCCCCCEEEeecCcccccCCC-CCcccccccccccCCCC
Q 047954 99 QLQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPK-TQTLQLFRSYSYSNNPY 150 (582)
Q Consensus 99 ~l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~-~~~~~~~~~~~~~~n~~ 150 (582)
+|++|.+++..|.. .+++|+.|+|++|++++..+. ...+..+..+++.+|..
T Consensus 134 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i 188 (477)
T 2id5_A 134 EVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNI 188 (477)
T ss_dssp EECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCC
T ss_pred ECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcC
Confidence 99999999877753 678999999999998864332 23456667777777653
No 360
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.23 E-value=1.6e-11 Score=123.92 Aligned_cols=100 Identities=18% Similarity=0.110 Sum_probs=44.2
Q ss_pred CCCcEEEccCCccccccCCCCCCCCCCEEeCCCCcccccccccccCCCcCCeeecccCcccCCCCCC---CCCCCCEEEe
Q 047954 46 PELIVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQLQNNNLTGPVPEF---NQSSLKVFNV 122 (582)
Q Consensus 46 ~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~l~~N~l~g~ip~~---~~~~l~~l~l 122 (582)
++|+.|++++|.+++..+.. +++|+.|+|++|++++..|..++.+++|++|+|++|.+++..|.. .+++|+.|+|
T Consensus 99 ~~L~~L~l~~n~l~~~~~~~--~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L 176 (317)
T 3o53_A 99 PSIETLHAANNNISRVSCSR--GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNL 176 (317)
T ss_dssp TTCCEEECCSSCCSEEEECC--CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEEC
T ss_pred CCcCEEECCCCccCCcCccc--cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEEC
Confidence 44444444444444443321 234444444444444444444444444444444444444433331 2344444444
Q ss_pred ecCcccccCCCCCcccccccccccCC
Q 047954 123 SNNNLSGSIPKTQTLQLFRSYSYSNN 148 (582)
Q Consensus 123 s~N~l~g~ip~~~~~~~~~~~~~~~n 148 (582)
++|.+++. |....+..+..+++++|
T Consensus 177 ~~N~l~~~-~~~~~l~~L~~L~Ls~N 201 (317)
T 3o53_A 177 QYNFIYDV-KGQVVFAKLKTLDLSSN 201 (317)
T ss_dssp TTSCCCEE-ECCCCCTTCCEEECCSS
T ss_pred CCCcCccc-ccccccccCCEEECCCC
Confidence 44444432 22222344444444444
No 361
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.22 E-value=1.3e-11 Score=119.22 Aligned_cols=126 Identities=13% Similarity=0.140 Sum_probs=99.8
Q ss_pred CCeEEEEEeCCCc-ceeccCccccCCCCCCcEEEccC-CccccccC-CCCCCCCCCEEeCCCCcccccccccccCCCcCC
Q 047954 20 SAHVTGIVLEDMR-LNGEIKSDAFADIPELIVINFKN-NIISGNFM-NFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLE 96 (582)
Q Consensus 20 ~~~~~~l~l~~~~-l~g~ip~~~~~~l~~L~~l~l~~-n~~~g~~~-~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~ 96 (582)
.++++.|+|++|+ ++ .||+..+..+++|++|+|++ |.+++..+ .+.++++|+.|+|++|.+++ +|. +..+++|+
T Consensus 54 l~~L~~L~l~~n~~l~-~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~ 130 (239)
T 2xwt_C 54 LPNISRIYVSIDVTLQ-QLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTD 130 (239)
T ss_dssp CTTCCEEEEECCSSCC-EECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCC
T ss_pred CCCCcEEeCCCCCCcc-eeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccc
Confidence 4678999999997 55 56666688999999999998 99987765 46788899999999999987 787 88888888
Q ss_pred ---eeecccC-cccCCCCC-C-CCCCCC-EEEeecCcccccCCCC-CcccccccccccCCC
Q 047954 97 ---SLQLQNN-NLTGPVPE-F-NQSSLK-VFNVSNNNLSGSIPKT-QTLQLFRSYSYSNNP 149 (582)
Q Consensus 97 ---~l~l~~N-~l~g~ip~-~-~~~~l~-~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~ 149 (582)
+|+|++| ++++..+. + .+++|+ .|++++|.++ .+|.. .....+..+++++|.
T Consensus 131 ~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~ 190 (239)
T 2xwt_C 131 IFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNK 190 (239)
T ss_dssp SEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCT
T ss_pred cccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCC
Confidence 9999999 88764443 2 578888 9999999988 67654 222567778888885
No 362
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.22 E-value=1.4e-11 Score=134.04 Aligned_cols=100 Identities=22% Similarity=0.196 Sum_probs=91.4
Q ss_pred CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCCCCCCCCCCEEeCCCCcccccc-cccccCCCcCCee
Q 047954 20 SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGEI-SRSLLSLKFLESL 98 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~i-p~~~~~l~~l~~l 98 (582)
..+++.|+|++|+|+ .||. .++.|++|+.|+|++|.|++ +|.++.+++|+.|+|++|+|++.+ |..+++|++|+.|
T Consensus 462 l~~L~~L~Ls~N~l~-~lp~-~~~~l~~L~~L~Ls~N~l~~-lp~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L 538 (567)
T 1dce_A 462 LLLVTHLDLSHNRLR-ALPP-ALAALRCLEVLQASDNALEN-VDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLL 538 (567)
T ss_dssp GTTCCEEECCSSCCC-CCCG-GGGGCTTCCEEECCSSCCCC-CGGGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEE
T ss_pred cccCcEeecCccccc-ccch-hhhcCCCCCEEECCCCCCCC-CcccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEE
Confidence 457999999999999 8876 59999999999999999998 779999999999999999999998 9999999999999
Q ss_pred ecccCcccCCCCCC-----CCCCCCEEEe
Q 047954 99 QLQNNNLTGPVPEF-----NQSSLKVFNV 122 (582)
Q Consensus 99 ~l~~N~l~g~ip~~-----~~~~l~~l~l 122 (582)
+|++|.|+|.+|.. .+++|+.||+
T Consensus 539 ~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 539 NLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp ECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred EecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 99999999987753 3788998874
No 363
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.22 E-value=2.2e-11 Score=133.00 Aligned_cols=129 Identities=17% Similarity=0.207 Sum_probs=98.0
Q ss_pred CeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccC--CCCCCCCCCEEeCCCCcccccccccccCCCcCCee
Q 047954 21 AHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFM--NFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESL 98 (582)
Q Consensus 21 ~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~--~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l 98 (582)
.+++.|+|++|.+++.. +. +..+++|+.|++++|.+++.++ .+.++++|+.|+|++|.+++.+|..+.++++|++|
T Consensus 373 ~~L~~L~l~~n~l~~~~-~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 450 (570)
T 2z63_A 373 TSLKYLDLSFNGVITMS-SN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 450 (570)
T ss_dssp SCCCEEECCSCSEEEEE-EE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE
T ss_pred CccCEEECCCCcccccc-cc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEE
Confidence 45666666666666543 33 6777888888888888887765 46778888888888888888888888888888888
Q ss_pred ecccCccc-CCCCCC--CCCCCCEEEeecCcccccCCCC-CcccccccccccCCCCC
Q 047954 99 QLQNNNLT-GPVPEF--NQSSLKVFNVSNNNLSGSIPKT-QTLQLFRSYSYSNNPYL 151 (582)
Q Consensus 99 ~l~~N~l~-g~ip~~--~~~~l~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~l 151 (582)
+|++|.++ |.+|.. .+++|+.|+|++|.+++..|.. ..+..+..+++++|...
T Consensus 451 ~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 507 (570)
T 2z63_A 451 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLK 507 (570)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred ECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCC
Confidence 88888887 677764 6788888888888888877754 45677788888888543
No 364
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.21 E-value=4.2e-11 Score=127.00 Aligned_cols=78 Identities=27% Similarity=0.330 Sum_probs=40.9
Q ss_pred CCCcEEEccCCccccccCCCCCCCCCCEEeCCCCcccccccccccCCCcCCeeecccCcccCCCCCC-CCCCCCEEEeec
Q 047954 46 PELIVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQLQNNNLTGPVPEF-NQSSLKVFNVSN 124 (582)
Q Consensus 46 ~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~l~~N~l~g~ip~~-~~~~l~~l~ls~ 124 (582)
++|++|+|++|.+++ +|++.++++|++|+|++|++++ +|..+ .+|++|+|++|++++ +|.. .+++|+.|++++
T Consensus 131 ~~L~~L~L~~n~l~~-lp~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~~~~~l~~L~~L~l~~ 204 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LPELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LPELQNLPFLTAIYADN 204 (454)
T ss_dssp TTCCEEECCSSCCSS-CCCCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CCCCTTCTTCCEEECCS
T ss_pred CCCCEEECcCCCCCC-CcccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-CccccCCCCCCEEECCC
Confidence 355555555555554 4455555555555555555554 44332 245555555555554 4432 445555555555
Q ss_pred Ccccc
Q 047954 125 NNLSG 129 (582)
Q Consensus 125 N~l~g 129 (582)
|.+++
T Consensus 205 N~l~~ 209 (454)
T 1jl5_A 205 NSLKK 209 (454)
T ss_dssp SCCSS
T ss_pred CcCCc
Confidence 55554
No 365
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.21 E-value=1.5e-11 Score=126.00 Aligned_cols=128 Identities=17% Similarity=0.242 Sum_probs=106.5
Q ss_pred CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCC-CCCCCCCCEEeCCCCcccccccc--cccCCCcCC
Q 047954 20 SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMN-FSSNHKLKDIDLSGNKFYGEISR--SLLSLKFLE 96 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~-~~~~~~l~~l~l~~N~l~g~ip~--~~~~l~~l~ 96 (582)
..+++.|+|++|++++..| ..++.+++|++|+|++|.+++..+. +.++++|++|+|++|.+++ +|. .+.++++|+
T Consensus 75 l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~~l~~L~ 152 (353)
T 2z80_A 75 CVNLQALVLTSNGINTIEE-DSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKT-LGETSLFSHLTKLQ 152 (353)
T ss_dssp CTTCCEEECTTSCCCEECT-TTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSS-SCSSCSCTTCTTCC
T ss_pred CCCCCEEECCCCccCccCH-hhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcc-cCchhhhccCCCCc
Confidence 5679999999999998654 5689999999999999999986665 7889999999999999994 665 789999999
Q ss_pred eeecccCcccCCCC-CC--CCCCCCEEEeecCcccccCCCC-CcccccccccccCCC
Q 047954 97 SLQLQNNNLTGPVP-EF--NQSSLKVFNVSNNNLSGSIPKT-QTLQLFRSYSYSNNP 149 (582)
Q Consensus 97 ~l~l~~N~l~g~ip-~~--~~~~l~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~ 149 (582)
+|+|++|+..+.+| .. .+++|+.|++++|.+++..|.. ..+..+..+++++|.
T Consensus 153 ~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 209 (353)
T 2z80_A 153 ILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQ 209 (353)
T ss_dssp EEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSC
T ss_pred EEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCc
Confidence 99999996444454 32 6789999999999999987765 446677777777764
No 366
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.20 E-value=1.8e-11 Score=111.22 Aligned_cols=105 Identities=18% Similarity=0.186 Sum_probs=90.8
Q ss_pred CCCCCcEEEccCCccc-cccCC-CCCCCCCCEEeCCCCcccccccccccCCCcCCeeecccCcccCCCCCC--CCCCCCE
Q 047954 44 DIPELIVINFKNNIIS-GNFMN-FSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQLQNNNLTGPVPEF--NQSSLKV 119 (582)
Q Consensus 44 ~l~~L~~l~l~~n~~~-g~~~~-~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~l~~N~l~g~ip~~--~~~~l~~ 119 (582)
..++|+.|+|++|.++ |.+|. +..+++|+.|+|++|.+++. ..+..+++|++|+|++|.+++.+|.. .+++|+.
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 4588999999999999 88886 48899999999999999976 78999999999999999999988875 5899999
Q ss_pred EEeecCcccccC--CCCCcccccccccccCCCC
Q 047954 120 FNVSNNNLSGSI--PKTQTLQLFRSYSYSNNPY 150 (582)
Q Consensus 120 l~ls~N~l~g~i--p~~~~~~~~~~~~~~~n~~ 150 (582)
|+|++|.+++.- +....+..+..+++++|..
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l 132 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEV 132 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGG
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcC
Confidence 999999998732 3445677888888888864
No 367
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.20 E-value=7.2e-11 Score=119.72 Aligned_cols=127 Identities=20% Similarity=0.272 Sum_probs=76.3
Q ss_pred eEEEEEeCCCcceeccCccccCCCCCCcEEEccCCcccc--ccC-CCCCC---------------------CCCCEEeCC
Q 047954 22 HVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISG--NFM-NFSSN---------------------HKLKDIDLS 77 (582)
Q Consensus 22 ~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g--~~~-~~~~~---------------------~~l~~l~l~ 77 (582)
.++.|+|++|.+++.. +..+..+++|+.|+|++|.++. ..+ .+.++ ++|+.|+|+
T Consensus 122 ~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~~~L~~L~l~ 200 (330)
T 1xku_A 122 TLQELRVHENEITKVR-KSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLD 200 (330)
T ss_dssp TCCEEECCSSCCCBBC-HHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCCTTCSEEECT
T ss_pred cccEEECCCCcccccC-HhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCccccccCCEEECC
Confidence 4666666666666432 3345556666666666665542 222 12223 456666666
Q ss_pred CCcccccccccccCCCcCCeeecccCcccCCCCCC--CCCCCCEEEeecCcccccCCCC-CcccccccccccCCCC
Q 047954 78 GNKFYGEISRSLLSLKFLESLQLQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKT-QTLQLFRSYSYSNNPY 150 (582)
Q Consensus 78 ~N~l~g~ip~~~~~l~~l~~l~l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~ 150 (582)
+|.+++..|..+.++++|+.|+|++|.+++..|.. .+++|+.|+|++|.++ .+|.. ..+..+..+++++|..
T Consensus 201 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i 275 (330)
T 1xku_A 201 GNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNI 275 (330)
T ss_dssp TSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCC
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcC
Confidence 77777666667777777777777777777655532 5567777777777776 55543 3455666666666653
No 368
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.20 E-value=5.7e-11 Score=123.43 Aligned_cols=125 Identities=21% Similarity=0.173 Sum_probs=105.1
Q ss_pred CeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCC-CCCCCCCCEEeCCCCccccccccc-ccCCCcCCee
Q 047954 21 AHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMN-FSSNHKLKDIDLSGNKFYGEISRS-LLSLKFLESL 98 (582)
Q Consensus 21 ~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~-~~~~~~l~~l~l~~N~l~g~ip~~-~~~l~~l~~l 98 (582)
.+++.|+|++|++++.. +..++.+++|++|+|++|.+++..|. +.++++|++|+|++|.++ .+|.. +.++++|++|
T Consensus 69 ~~L~~L~L~~n~i~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L 146 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEID-TYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTL 146 (390)
T ss_dssp CCCSEEECTTSCCCEEC-TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEE
T ss_pred ccCcEEECCCCcccccC-hhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEE
Confidence 56889999999998754 45689999999999999999998875 789999999999999999 56655 6899999999
Q ss_pred ecccCcccCCCCCC--CCCCCCEEEeecCcccccCCCCCcccccccccccCCC
Q 047954 99 QLQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKTQTLQLFRSYSYSNNP 149 (582)
Q Consensus 99 ~l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n~ 149 (582)
+|++|.+++..|.. .+++|+.|++++|.+++. + ...+..+..+.+++|.
T Consensus 147 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~-~~~l~~L~~L~l~~n~ 197 (390)
T 3o6n_A 147 SMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV-D-LSLIPSLFHANVSYNL 197 (390)
T ss_dssp ECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC-C-GGGCTTCSEEECCSSC
T ss_pred ECCCCccCccChhhccCCCCCCEEECCCCcCCcc-c-cccccccceeeccccc
Confidence 99999999877763 689999999999999864 2 2345666677777764
No 369
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.19 E-value=2.7e-11 Score=123.67 Aligned_cols=123 Identities=16% Similarity=0.159 Sum_probs=71.2
Q ss_pred CeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCCCCCCCCCCEEeCCCCcccccccccccCCCcCCeeec
Q 047954 21 AHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQL 100 (582)
Q Consensus 21 ~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~l 100 (582)
..+..|++++|.+++..+ +..+++|+.|+|++|.+++..+ +..+++|+.|+|++|.+++. +.+..+++|++|+|
T Consensus 199 ~~L~~L~l~~n~l~~~~~---~~~~~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l 272 (347)
T 4fmz_A 199 TSLHYFTAYVNQITDITP---VANMTRLNSLKIGNNKITDLSP-LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNV 272 (347)
T ss_dssp TTCCEEECCSSCCCCCGG---GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEEC
T ss_pred CccceeecccCCCCCCch---hhcCCcCCEEEccCCccCCCcc-hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEc
Confidence 445666666666665432 5566666666666666665444 55666666666666666642 34566666666666
Q ss_pred ccCcccCCCCCC-CCCCCCEEEeecCcccccCCCC-CcccccccccccCCCC
Q 047954 101 QNNNLTGPVPEF-NQSSLKVFNVSNNNLSGSIPKT-QTLQLFRSYSYSNNPY 150 (582)
Q Consensus 101 ~~N~l~g~ip~~-~~~~l~~l~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~ 150 (582)
++|++++. |.. .+++|+.|++++|.+++..|.. ..+..+..+++++|+.
T Consensus 273 ~~n~l~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l 323 (347)
T 4fmz_A 273 GSNQISDI-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHI 323 (347)
T ss_dssp CSSCCCCC-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSC
T ss_pred cCCccCCC-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCcc
Confidence 66666653 332 4556666666666666554432 2344555566666653
No 370
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.19 E-value=2.8e-11 Score=128.93 Aligned_cols=124 Identities=19% Similarity=0.210 Sum_probs=87.4
Q ss_pred CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCCCCCCCCCCEEeCCCCcccccccccccCCCcCCeee
Q 047954 20 SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQ 99 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~ 99 (582)
..+++.|+|++|.+++..| +..+++|+.|+|++|.+++..+ +..+++|+.|+|++|++++..| +..+++|+.|+
T Consensus 242 l~~L~~L~l~~n~l~~~~~---~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 315 (466)
T 1o6v_A 242 LTNLTDLDLANNQISNLAP---LSGLTKLTELKLGANQISNISP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLT 315 (466)
T ss_dssp CTTCSEEECCSSCCCCCGG---GTTCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEE
T ss_pred CCCCCEEECCCCccccchh---hhcCCCCCEEECCCCccCcccc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEE
Confidence 3567788888888877543 6777888888888888877555 6677777777777777776544 67777777777
Q ss_pred cccCcccCCCCCCCCCCCCEEEeecCcccccCCCCCcccccccccccCCCC
Q 047954 100 LQNNNLTGPVPEFNQSSLKVFNVSNNNLSGSIPKTQTLQLFRSYSYSNNPY 150 (582)
Q Consensus 100 l~~N~l~g~ip~~~~~~l~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~ 150 (582)
|++|++++..|-..+++|+.|++++|.+++. |....+..+..+++++|..
T Consensus 316 L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l 365 (466)
T 1o6v_A 316 LYFNNISDISPVSSLTKLQRLFFYNNKVSDV-SSLANLTNINWLSAGHNQI 365 (466)
T ss_dssp CCSSCCSCCGGGGGCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSSCC
T ss_pred CcCCcCCCchhhccCccCCEeECCCCccCCc-hhhccCCCCCEEeCCCCcc
Confidence 7777777766655667777777777777664 4444555666666666654
No 371
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.18 E-value=1.9e-11 Score=108.69 Aligned_cols=105 Identities=16% Similarity=0.199 Sum_probs=90.6
Q ss_pred CCCCCcEEEccCCccc-cccCC-CCCCCCCCEEeCCCCcccccccccccCCCcCCeeecccCcccCCCCCC--CCCCCCE
Q 047954 44 DIPELIVINFKNNIIS-GNFMN-FSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQLQNNNLTGPVPEF--NQSSLKV 119 (582)
Q Consensus 44 ~l~~L~~l~l~~n~~~-g~~~~-~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~l~~N~l~g~ip~~--~~~~l~~ 119 (582)
..++|+.|++++|.++ |.+|. +..+++|+.|+|++|.+++. ..++++++|++|+|++|.+++.+|.. .+++|+.
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 4578999999999999 88875 58899999999999999987 78999999999999999999988875 5899999
Q ss_pred EEeecCccccc-C-CCCCcccccccccccCCCC
Q 047954 120 FNVSNNNLSGS-I-PKTQTLQLFRSYSYSNNPY 150 (582)
Q Consensus 120 l~ls~N~l~g~-i-p~~~~~~~~~~~~~~~n~~ 150 (582)
|++++|.+++. . +....++.+..+++++|..
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l 125 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEV 125 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGG
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcc
Confidence 99999999983 3 3335577788888988853
No 372
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.18 E-value=2.7e-11 Score=128.65 Aligned_cols=121 Identities=18% Similarity=0.152 Sum_probs=89.6
Q ss_pred CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCCCCCCCCCCEEeCCCCcccccccccccCCCcCCeee
Q 047954 20 SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQ 99 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~ 99 (582)
.+.++.|+|++|++++ +| ++.+++|+.|++++|.+++. .+..+++|+.|+|++|+|+| || ++.+++|++|+
T Consensus 169 l~~L~~L~ls~n~l~~-l~---l~~l~~L~~L~l~~N~l~~~--~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~ 239 (457)
T 3bz5_A 169 QTQLTTLDCSFNKITE-LD---VSQNKLLNRLNCDTNNITKL--DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFD 239 (457)
T ss_dssp CTTCCEEECCSSCCCC-CC---CTTCTTCCEEECCSSCCSCC--CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEE
T ss_pred CCcCCEEECCCCccce-ec---cccCCCCCEEECcCCcCCee--ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEE
Confidence 4568888999998887 54 67788888888888888875 47778888888888888887 66 77888888888
Q ss_pred cccCcccCCCCCCCCC----------CCCEEEeecCcccccCCCCCcccccccccccCCCCC
Q 047954 100 LQNNNLTGPVPEFNQS----------SLKVFNVSNNNLSGSIPKTQTLQLFRSYSYSNNPYL 151 (582)
Q Consensus 100 l~~N~l~g~ip~~~~~----------~l~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~l 151 (582)
|++|+|+|..+ ..++ +|+.|++++|.+.|.+|. ..+..+..+++++|..+
T Consensus 240 l~~N~l~~~~~-~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~~-~~l~~L~~L~Ls~n~~l 299 (457)
T 3bz5_A 240 CSVNPLTELDV-STLSKLTTLHCIQTDLLEIDLTHNTQLIYFQA-EGCRKIKELDVTHNTQL 299 (457)
T ss_dssp CCSSCCSCCCC-TTCTTCCEEECTTCCCSCCCCTTCTTCCEEEC-TTCTTCCCCCCTTCTTC
T ss_pred eeCCcCCCcCH-HHCCCCCEEeccCCCCCEEECCCCccCCcccc-cccccCCEEECCCCccc
Confidence 88888887433 2222 455667777777777773 34566777777777643
No 373
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.18 E-value=3.7e-11 Score=128.03 Aligned_cols=125 Identities=24% Similarity=0.296 Sum_probs=108.4
Q ss_pred CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCCCCCCCCCCEEeCCCCcccccccccccCCCcCCeee
Q 047954 20 SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQ 99 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~ 99 (582)
..+++.|+|++|++++. + .+..+++|+.|++++|.+++..+ +..+++|+.|+|++|.+++..| +..+++|+.|+
T Consensus 220 l~~L~~L~l~~n~l~~~-~--~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 293 (466)
T 1o6v_A 220 LTNLDELSLNGNQLKDI-G--TLASLTNLTDLDLANNQISNLAP-LSGLTKLTELKLGANQISNISP--LAGLTALTNLE 293 (466)
T ss_dssp CTTCCEEECCSSCCCCC-G--GGGGCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEE
T ss_pred cCCCCEEECCCCCcccc-h--hhhcCCCCCEEECCCCccccchh-hhcCCCCCEEECCCCccCcccc--ccCCCccCeEE
Confidence 46789999999999873 3 47889999999999999998877 8889999999999999998655 88999999999
Q ss_pred cccCcccCCCCCCCCCCCCEEEeecCcccccCCCCCcccccccccccCCCCC
Q 047954 100 LQNNNLTGPVPEFNQSSLKVFNVSNNNLSGSIPKTQTLQLFRSYSYSNNPYL 151 (582)
Q Consensus 100 l~~N~l~g~ip~~~~~~l~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~l 151 (582)
|++|++++..|-..+++|+.|+|++|++++..| ...+..+..+++++|...
T Consensus 294 L~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~n~l~ 344 (466)
T 1o6v_A 294 LNENQLEDISPISNLKNLTYLTLYFNNISDISP-VSSLTKLQRLFFYNNKVS 344 (466)
T ss_dssp CCSSCCSCCGGGGGCTTCSEEECCSSCCSCCGG-GGGCTTCCEEECCSSCCC
T ss_pred cCCCcccCchhhcCCCCCCEEECcCCcCCCchh-hccCccCCEeECCCCccC
Confidence 999999987665688999999999999998776 456778888999988643
No 374
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.17 E-value=1.2e-10 Score=123.74 Aligned_cols=101 Identities=20% Similarity=0.253 Sum_probs=61.1
Q ss_pred CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCCCCCCCCCCEEeCCCCcccccccccccCCCcCCeee
Q 047954 20 SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQ 99 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~ 99 (582)
...++.|+|++|++++ +| ++.+++|+.|++++|.+++. +++.+++|+.|+|++|.+.|.+ .++.+++|+.|+
T Consensus 105 l~~L~~L~L~~N~l~~-l~---~~~l~~L~~L~l~~N~l~~l--~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ 176 (457)
T 3bz5_A 105 LTKLTYLNCDTNKLTK-LD---VSQNPLLTYLNCARNTLTEI--DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLD 176 (457)
T ss_dssp CTTCCEEECCSSCCSC-CC---CTTCTTCCEEECTTSCCSCC--CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEE
T ss_pred CCcCCEEECCCCcCCe-ec---CCCCCcCCEEECCCCcccee--ccccCCcCCEEECCCCCccccc--ccccCCcCCEEE
Confidence 4567778888888776 43 67777777777777777773 2555566666666666555555 255555555555
Q ss_pred cccCcccCCCCCCCCCCCCEEEeecCcccc
Q 047954 100 LQNNNLTGPVPEFNQSSLKVFNVSNNNLSG 129 (582)
Q Consensus 100 l~~N~l~g~ip~~~~~~l~~l~ls~N~l~g 129 (582)
|++|++++ +|-..+++|+.|++++|++++
T Consensus 177 ls~n~l~~-l~l~~l~~L~~L~l~~N~l~~ 205 (457)
T 3bz5_A 177 CSFNKITE-LDVSQNKLLNRLNCDTNNITK 205 (457)
T ss_dssp CCSSCCCC-CCCTTCTTCCEEECCSSCCSC
T ss_pred CCCCccce-eccccCCCCCEEECcCCcCCe
Confidence 55555555 443344444444444444443
No 375
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.16 E-value=2.7e-11 Score=111.10 Aligned_cols=104 Identities=21% Similarity=0.262 Sum_probs=91.6
Q ss_pred CeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCCC-CCCCCCCEEeCCCCcccccccc--cccCCCcCCe
Q 047954 21 AHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMNF-SSNHKLKDIDLSGNKFYGEISR--SLLSLKFLES 97 (582)
Q Consensus 21 ~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~~-~~~~~l~~l~l~~N~l~g~ip~--~~~~l~~l~~ 97 (582)
++++.|+|++|++++. ..++.+++|++|+|++|.+++..+.+ ..+++|+.|+|++|.++ .+|. .+..+++|+.
T Consensus 42 ~~L~~L~Ls~N~l~~~---~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~ 117 (176)
T 1a9n_A 42 DQFDAIDFSDNEIRKL---DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTY 117 (176)
T ss_dssp TCCSEEECCSSCCCEE---CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCE
T ss_pred CCCCEEECCCCCCCcc---cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCE
Confidence 3799999999999985 35899999999999999999876665 88999999999999994 6887 8999999999
Q ss_pred eecccCcccCCCCCC------CCCCCCEEEeecCcccc
Q 047954 98 LQLQNNNLTGPVPEF------NQSSLKVFNVSNNNLSG 129 (582)
Q Consensus 98 l~l~~N~l~g~ip~~------~~~~l~~l~ls~N~l~g 129 (582)
|+|++|.++ .+|.. .+++|+.||+++|....
T Consensus 118 L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 118 LCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp EECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred EEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 999999998 56652 67999999999998764
No 376
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.16 E-value=1.1e-10 Score=118.59 Aligned_cols=124 Identities=21% Similarity=0.301 Sum_probs=107.2
Q ss_pred eEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccC-CCCCCCCCCEEeCCCCcccccccccccCCCcCCeeec
Q 047954 22 HVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFM-NFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQL 100 (582)
Q Consensus 22 ~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~-~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~l 100 (582)
++..+++++++++ .+|.. + .++|+.|+|++|.+++..| .+.++++|++|+|++|++++..|..++++++|++|+|
T Consensus 34 ~l~~l~~~~~~l~-~ip~~-~--~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 109 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKE-I--SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYI 109 (332)
T ss_dssp ETTEEECCSSCCS-SCCSC-C--CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEEC
T ss_pred cCCEEECCCCCcc-ccCCC-C--CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEEC
Confidence 4678999999997 77764 3 3789999999999998877 6899999999999999999999999999999999999
Q ss_pred ccCcccCCCCCCCCCCCCEEEeecCcccccCCC-CCcccccccccccCCCC
Q 047954 101 QNNNLTGPVPEFNQSSLKVFNVSNNNLSGSIPK-TQTLQLFRSYSYSNNPY 150 (582)
Q Consensus 101 ~~N~l~g~ip~~~~~~l~~l~ls~N~l~g~ip~-~~~~~~~~~~~~~~n~~ 150 (582)
++|+++ .+|....++|+.|++++|.+++..+. ...+..+..+++++|..
T Consensus 110 ~~n~l~-~l~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l 159 (332)
T 2ft3_A 110 SKNHLV-EIPPNLPSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPL 159 (332)
T ss_dssp CSSCCC-SCCSSCCTTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCC
T ss_pred CCCcCC-ccCccccccCCEEECCCCccCccCHhHhCCCccCCEEECCCCcc
Confidence 999998 78876668999999999999865443 24577888889988865
No 377
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.14 E-value=7.9e-11 Score=120.29 Aligned_cols=104 Identities=18% Similarity=0.204 Sum_probs=88.3
Q ss_pred cEEEccCC-ccccccCCCCCCCCCCEEeCCC-CcccccccccccCCCcCCeeecccCcccCCCCCC--CCCCCCEEEeec
Q 047954 49 IVINFKNN-IISGNFMNFSSNHKLKDIDLSG-NKFYGEISRSLLSLKFLESLQLQNNNLTGPVPEF--NQSSLKVFNVSN 124 (582)
Q Consensus 49 ~~l~l~~n-~~~g~~~~~~~~~~l~~l~l~~-N~l~g~ip~~~~~l~~l~~l~l~~N~l~g~ip~~--~~~~l~~l~ls~ 124 (582)
..+++++| .|++ ||.+..+++|+.|+|++ |+|++..|..|++|++|+.|+|++|+|+|..|.. .+++|+.|+|++
T Consensus 11 ~~v~~~~~n~l~~-ip~l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 11 SGLRCTRDGALDS-LHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp SCEECCSSCCCTT-TTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred CEEEcCCCCCCCc-cCCCCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 35689998 8987 55588899999999996 9999998899999999999999999999988863 789999999999
Q ss_pred CcccccCCCCCcccccccccccCCCCCCC
Q 047954 125 NNLSGSIPKTQTLQLFRSYSYSNNPYLCG 153 (582)
Q Consensus 125 N~l~g~ip~~~~~~~~~~~~~~~n~~l~~ 153 (582)
|+|++..|.......+..+.+.+|+..|.
T Consensus 90 N~l~~~~~~~~~~~~L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 90 NALESLSWKTVQGLSLQELVLSGNPLHCS 118 (347)
T ss_dssp SCCSCCCSTTTCSCCCCEEECCSSCCCCC
T ss_pred CccceeCHHHcccCCceEEEeeCCCccCC
Confidence 99997555443333388889999988775
No 378
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.14 E-value=1.3e-10 Score=123.24 Aligned_cols=117 Identities=22% Similarity=0.360 Sum_probs=89.2
Q ss_pred CeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCCCCCCCCCCEEeCCCCcccccccccccCCCcCCeeec
Q 047954 21 AHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQL 100 (582)
Q Consensus 21 ~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~l 100 (582)
++++.|+|++|+++| +|. .+++|+.|++++|.+++ +|.+. ++|++|+|++|++++ || +++++++|++|+|
T Consensus 91 ~~L~~L~l~~n~l~~-lp~----~~~~L~~L~l~~n~l~~-l~~~~--~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l 160 (454)
T 1jl5_A 91 PHLESLVASCNSLTE-LPE----LPQSLKSLLVDNNNLKA-LSDLP--PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDV 160 (454)
T ss_dssp TTCSEEECCSSCCSS-CCC----CCTTCCEEECCSSCCSC-CCSCC--TTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCc-ccc----ccCCCcEEECCCCccCc-ccCCC--CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEEC
Confidence 356677777777776 653 23677777887777776 22221 579999999999987 88 5899999999999
Q ss_pred ccCcccCCCCCCCCCCCCEEEeecCcccccCCCCCcccccccccccCCCC
Q 047954 101 QNNNLTGPVPEFNQSSLKVFNVSNNNLSGSIPKTQTLQLFRSYSYSNNPY 150 (582)
Q Consensus 101 ~~N~l~g~ip~~~~~~l~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~ 150 (582)
++|++++ +|.. ..+|+.|++++|.+++ +|....+..+..+++++|..
T Consensus 161 ~~N~l~~-lp~~-~~~L~~L~L~~n~l~~-l~~~~~l~~L~~L~l~~N~l 207 (454)
T 1jl5_A 161 DNNSLKK-LPDL-PPSLEFIAAGNNQLEE-LPELQNLPFLTAIYADNNSL 207 (454)
T ss_dssp CSSCCSC-CCCC-CTTCCEEECCSSCCSS-CCCCTTCTTCCEEECCSSCC
T ss_pred CCCcCcc-cCCC-cccccEEECcCCcCCc-CccccCCCCCCEEECCCCcC
Confidence 9999987 7754 4689999999999987 77666777888888888854
No 379
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.10 E-value=1.3e-10 Score=118.94 Aligned_cols=140 Identities=15% Similarity=0.101 Sum_probs=103.2
Q ss_pred CCcceeeeCCC---------CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCC--CCCCCCCCE-EeC
Q 047954 9 SQWYGIQCDIN---------SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMN--FSSNHKLKD-IDL 76 (582)
Q Consensus 9 ~~w~gv~c~~~---------~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~--~~~~~~l~~-l~l 76 (582)
|+|..|.|+.+ ...++.|+|++|+++ .||+..|..|++|++|+|++|.+.+.+|. |.++++|.. +++
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 68999999642 135788999999998 57777789999999999999999888863 677877764 677
Q ss_pred CCCcccccccccccCCCcCCeeecccCcccCCCCCC--CCCCCCEEEeecCcccccCCCC--Ccc-cccccccccCCC
Q 047954 77 SGNKFYGEISRSLLSLKFLESLQLQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKT--QTL-QLFRSYSYSNNP 149 (582)
Q Consensus 77 ~~N~l~g~ip~~~~~l~~l~~l~l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~--~~~-~~~~~~~~~~n~ 149 (582)
++|++++..|..+.++++|++|++++|++++..+.. ....+..|++++|+--..+|.. ..+ ..+..+.+++|.
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~ 165 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNG 165 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSC
T ss_pred cCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccc
Confidence 789999888888999999999999999998655443 3455667787765544455543 111 234455666664
No 380
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.09 E-value=2.3e-10 Score=111.55 Aligned_cols=132 Identities=15% Similarity=0.107 Sum_probs=97.3
Q ss_pred cccCceEEEEEEEcCCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCC--ccccceEEEeCCeeEEEEEeCCCCChHHH
Q 047954 277 GKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPN--LLPLLAYYFSNDEKLLVYKFAGNGNLFNR 354 (582)
Q Consensus 277 G~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l~~~~~~~~~~~lv~e~~~~gsL~~~ 354 (582)
+.|..+.||++...++..+++|..... ....+..|+.+++.+.+.+ +.+++++....+..++||||++|.+|.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~-- 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL-- 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--
Confidence 355669999998777788999997543 2245778999888885544 456888888878889999999998873
Q ss_pred HhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCC------------------------------------------
Q 047954 355 IHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKS------------------------------------------ 392 (582)
Q Consensus 355 l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~------------------------------------------ 392 (582)
... . ....++.++++.|..||+...+
T Consensus 104 ~~~---------~---~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (264)
T 1nd4_A 104 SSH---------L---APAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELF 171 (264)
T ss_dssp TSC---------C---CHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHH
T ss_pred cCc---------C---CHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHH
Confidence 210 1 1235678888888988875310
Q ss_pred ---------CCCCcceecCCCCCCeeecCCCceEEeeccccc
Q 047954 393 ---------RTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSS 425 (582)
Q Consensus 393 ---------~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~ 425 (582)
.....++|+|++|.|||++++..+.|+|||.+.
T Consensus 172 ~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 172 ARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 011239999999999999877667799999864
No 381
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.09 E-value=1.2e-11 Score=128.28 Aligned_cols=129 Identities=20% Similarity=0.289 Sum_probs=84.0
Q ss_pred CeEEEEEeCCCcce-eccCc--cccCCCCCCcEEEccCCccc--c---ccC-CCCCCCCCCEEeCCCCccc----ccccc
Q 047954 21 AHVTGIVLEDMRLN-GEIKS--DAFADIPELIVINFKNNIIS--G---NFM-NFSSNHKLKDIDLSGNKFY----GEISR 87 (582)
Q Consensus 21 ~~~~~l~l~~~~l~-g~ip~--~~~~~l~~L~~l~l~~n~~~--g---~~~-~~~~~~~l~~l~l~~N~l~----g~ip~ 87 (582)
+++..|+|++|+++ +.+|. ..+..+++|+.|+|++|.++ | .++ .+..+++|+.|+|++|.++ +.+|.
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~ 238 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 238 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHH
Confidence 45666677777665 44431 23456677777777777776 3 234 5666777777777777776 66777
Q ss_pred cccCCCcCCeeecccCcccCC----CCC----CCCCCCCEEEeecCcccc----cCCCCC--cccccccccccCCC
Q 047954 88 SLLSLKFLESLQLQNNNLTGP----VPE----FNQSSLKVFNVSNNNLSG----SIPKTQ--TLQLFRSYSYSNNP 149 (582)
Q Consensus 88 ~~~~l~~l~~l~l~~N~l~g~----ip~----~~~~~l~~l~ls~N~l~g----~ip~~~--~~~~~~~~~~~~n~ 149 (582)
.+..+++|+.|+|++|.+++. +|. ..+++|+.|+|++|.+++ .+|... .++.+..+++++|.
T Consensus 239 ~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~ 314 (386)
T 2ca6_A 239 ALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNR 314 (386)
T ss_dssp HGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSB
T ss_pred HHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCc
Confidence 777777777777777777765 443 236777777777777776 466432 24566666666664
No 382
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.06 E-value=1.7e-10 Score=117.74 Aligned_cols=124 Identities=21% Similarity=0.280 Sum_probs=107.8
Q ss_pred CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCCCCCCCCCCEEeCCCCcccccccccccCCCcCCeee
Q 047954 20 SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQ 99 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~ 99 (582)
...+..|+|++|++++.. + +..+++|+.|++++|.+++ ++.+..+++|+.|+|++|.+++. +.+..+++|+.|+
T Consensus 220 ~~~L~~L~l~~n~l~~~~-~--~~~l~~L~~L~l~~n~l~~-~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~ 293 (347)
T 4fmz_A 220 MTRLNSLKIGNNKITDLS-P--LANLSQLTWLEIGTNQISD-INAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLF 293 (347)
T ss_dssp CTTCCEEECCSSCCCCCG-G--GTTCTTCCEEECCSSCCCC-CGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEE
T ss_pred CCcCCEEEccCCccCCCc-c--hhcCCCCCEEECCCCccCC-ChhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEE
Confidence 467999999999998754 2 8899999999999999987 47788999999999999999975 4589999999999
Q ss_pred cccCcccCCCCCC--CCCCCCEEEeecCcccccCCCCCcccccccccccCCCC
Q 047954 100 LQNNNLTGPVPEF--NQSSLKVFNVSNNNLSGSIPKTQTLQLFRSYSYSNNPY 150 (582)
Q Consensus 100 l~~N~l~g~ip~~--~~~~l~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~ 150 (582)
|++|.+++..|.. .+++|+.|+|++|.+++..| ...+..+..+++++|+.
T Consensus 294 L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~N~i 345 (347)
T 4fmz_A 294 LNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP-LASLSKMDSADFANQVI 345 (347)
T ss_dssp CCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG-GGGCTTCSEESSSCC--
T ss_pred CcCCcCCCcChhHhhccccCCEEEccCCccccccC-hhhhhccceeehhhhcc
Confidence 9999999888773 78999999999999998777 55678888999998863
No 383
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.04 E-value=3.1e-11 Score=122.57 Aligned_cols=133 Identities=17% Similarity=0.250 Sum_probs=77.1
Q ss_pred CcceeeeCCCCCeEEEEEeCCCcceeccCccccCCC--CCCcEEEccCCccccccCCCCCCCCCCEEeCCCCccccc-cc
Q 047954 10 QWYGIQCDINSAHVTGIVLEDMRLNGEIKSDAFADI--PELIVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGE-IS 86 (582)
Q Consensus 10 ~w~gv~c~~~~~~~~~l~l~~~~l~g~ip~~~~~~l--~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~-ip 86 (582)
.|.++.|+ ...+..|+|+++++.. ..+..+ +.|+.|++++|.+++.++.+..+++|+.|+|++|.+++. +|
T Consensus 38 ~W~~~~~~--~~~~~~l~l~~~~~~~----~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~ 111 (336)
T 2ast_B 38 RWYRLASD--ESLWQTLDLTGKNLHP----DVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLH 111 (336)
T ss_dssp HHHHHHTC--STTSSEEECTTCBCCH----HHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHH
T ss_pred HHHHHhcC--chhheeeccccccCCH----HHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHH
Confidence 47777664 2345566666666552 223444 566666666666666666666666666666666666655 66
Q ss_pred ccccCCCcCCeeecccCcccCCCCCC--CCCCCCEEEeecC-ccccc-CCCC-CcccccccccccCC
Q 047954 87 RSLLSLKFLESLQLQNNNLTGPVPEF--NQSSLKVFNVSNN-NLSGS-IPKT-QTLQLFRSYSYSNN 148 (582)
Q Consensus 87 ~~~~~l~~l~~l~l~~N~l~g~ip~~--~~~~l~~l~ls~N-~l~g~-ip~~-~~~~~~~~~~~~~n 148 (582)
..+..+++|++|+|++|.+++.+|.. .+++|+.|+|++| .+++. +|.. ..+..+..+++++|
T Consensus 112 ~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~ 178 (336)
T 2ast_B 112 GILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWC 178 (336)
T ss_dssp HHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCC
T ss_pred HHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCC
Confidence 66666666666666666666555542 4566666666666 45542 3331 23445555555555
No 384
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.04 E-value=3e-10 Score=124.66 Aligned_cols=126 Identities=17% Similarity=0.215 Sum_probs=92.9
Q ss_pred CCCCccee--------eeCCCCCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCCCCCCCCCCEEeCCC
Q 047954 7 FPSQWYGI--------QCDINSAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMNFSSNHKLKDIDLSG 78 (582)
Q Consensus 7 ~~~~w~gv--------~c~~~~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~ 78 (582)
.+|.|.|. .|. ...++.|++++|+|+ .||.. +. ++|+.|+|++|.|++ +|. .+++|++|+|++
T Consensus 20 ~~~~~~~r~~~~~~~~~c~--~~~l~~L~ls~n~L~-~lp~~-l~--~~L~~L~L~~N~l~~-lp~--~l~~L~~L~Ls~ 90 (622)
T 3g06_A 20 PAEESRGRAAVVQKMRACL--NNGNAVLNVGESGLT-TLPDC-LP--AHITTLVIPDNNLTS-LPA--LPPELRTLEVSG 90 (622)
T ss_dssp CGGGHHHHHHHHHHHHHHH--HHCCCEEECCSSCCS-CCCSC-CC--TTCSEEEECSCCCSC-CCC--CCTTCCEEEECS
T ss_pred CcchhccccccCccccccc--CCCCcEEEecCCCcC-ccChh-hC--CCCcEEEecCCCCCC-CCC--cCCCCCEEEcCC
Confidence 45677664 232 235888999999998 78764 33 789999999999884 555 567899999999
Q ss_pred CcccccccccccCCCcCCeeecccCcccCCCCCCCCCCCCEEEeecCcccccCCCCCcccccccccccCCCC
Q 047954 79 NKFYGEISRSLLSLKFLESLQLQNNNLTGPVPEFNQSSLKVFNVSNNNLSGSIPKTQTLQLFRSYSYSNNPY 150 (582)
Q Consensus 79 N~l~g~ip~~~~~l~~l~~l~l~~N~l~g~ip~~~~~~l~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~ 150 (582)
|+|+ .||. .+++|++|+|++|++++ +|. .+++|+.|+|++|++++ +|.. +..+..+++++|..
T Consensus 91 N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~-~l~~L~~L~L~~N~l~~-lp~~--l~~L~~L~Ls~N~l 153 (622)
T 3g06_A 91 NQLT-SLPV---LPPGLLELSIFSNPLTH-LPA-LPSGLCKLWIFGNQLTS-LPVL--PPGLQELSVSDNQL 153 (622)
T ss_dssp CCCS-CCCC---CCTTCCEEEECSCCCCC-CCC-CCTTCCEEECCSSCCSC-CCCC--CTTCCEEECCSSCC
T ss_pred CcCC-cCCC---CCCCCCEEECcCCcCCC-CCC-CCCCcCEEECCCCCCCc-CCCC--CCCCCEEECcCCcC
Confidence 9988 4776 67888888888888886 555 56778888888888775 5543 35666777777743
No 385
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.03 E-value=1.8e-12 Score=121.39 Aligned_cols=108 Identities=18% Similarity=0.224 Sum_probs=93.0
Q ss_pred CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCC-CCCCCCCCEEeCCCCcccccccccccCCCcCCee
Q 047954 20 SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMN-FSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESL 98 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~-~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l 98 (582)
...++.|+|++|++++ +| .+..+++|+.|+|++|.++ .+|. +..+++|+.|+|++|++++ +| .+.++++|++|
T Consensus 47 l~~L~~L~ls~n~l~~-l~--~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L 120 (198)
T 1ds9_A 47 LKACKHLALSTNNIEK-IS--SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVL 120 (198)
T ss_dssp TTTCSEEECSEEEESC-CC--CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEE
T ss_pred CCCCCEEECCCCCCcc-cc--ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEE
Confidence 3578999999999998 76 5889999999999999999 5664 4556899999999999997 66 69999999999
Q ss_pred ecccCcccCCCC--C-CCCCCCCEEEeecCcccccCCC
Q 047954 99 QLQNNNLTGPVP--E-FNQSSLKVFNVSNNNLSGSIPK 133 (582)
Q Consensus 99 ~l~~N~l~g~ip--~-~~~~~l~~l~ls~N~l~g~ip~ 133 (582)
+|++|++++.-+ . ..+++|+.|++++|.+++.+|.
T Consensus 121 ~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 121 YMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp EESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred ECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 999999986322 2 3789999999999999998876
No 386
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.02 E-value=6.3e-10 Score=122.09 Aligned_cols=52 Identities=35% Similarity=0.346 Sum_probs=29.4
Q ss_pred CcCCeeecccCcccCCCCCCCCCCCCEEEeecCcccccCCCCCcccccccccccCCC
Q 047954 93 KFLESLQLQNNNLTGPVPEFNQSSLKVFNVSNNNLSGSIPKTQTLQLFRSYSYSNNP 149 (582)
Q Consensus 93 ~~l~~l~l~~N~l~g~ip~~~~~~l~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n~ 149 (582)
++|+.|+|++|+|++ || ..+++|+.|+|++|+|+ .||. .+..+..+++++|.
T Consensus 221 ~~L~~L~Ls~N~L~~-lp-~~l~~L~~L~Ls~N~L~-~lp~--~~~~L~~L~Ls~N~ 272 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP-VLPSELKELMVSGNRLT-SLPM--LPSGLLSLSVYRNQ 272 (622)
T ss_dssp TTCCEEECCSSCCSC-CC-CCCTTCCEEECCSSCCS-CCCC--CCTTCCEEECCSSC
T ss_pred CCCCEEEccCCccCc-CC-CCCCcCcEEECCCCCCC-cCCc--ccccCcEEeCCCCC
Confidence 456666666666665 45 33456666666666665 3454 34455555555554
No 387
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.01 E-value=2.4e-11 Score=123.37 Aligned_cols=140 Identities=14% Similarity=0.175 Sum_probs=114.8
Q ss_pred CCCcceeeeCCCC-----------CeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccc-cC-CCCCCCCCCEE
Q 047954 8 PSQWYGIQCDINS-----------AHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGN-FM-NFSSNHKLKDI 74 (582)
Q Consensus 8 ~~~w~gv~c~~~~-----------~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~-~~-~~~~~~~l~~l 74 (582)
|..|..+..+.+. ..+..|++++|.+++.++. +..+++|+.|+|++|.+++. ++ .+..+++|+.|
T Consensus 46 ~~~~~~l~l~~~~~~~~~~~~~~~~~l~~L~l~~n~l~~~~~~--~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 46 ESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAE--HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp STTSSEEECTTCBCCHHHHHHHHHTTCSEEECTTCEECSCCCS--CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred chhheeeccccccCCHHHHHhhhhccceEEEcCCccccccchh--hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 4568877664321 6789999999999998764 56899999999999999986 65 46788999999
Q ss_pred eCCCCcccccccccccCCCcCCeeecccC-cccCC-CCCC--CCCCCCEEEeecC-ccccc-CCCC-Cccc-cccccccc
Q 047954 75 DLSGNKFYGEISRSLLSLKFLESLQLQNN-NLTGP-VPEF--NQSSLKVFNVSNN-NLSGS-IPKT-QTLQ-LFRSYSYS 146 (582)
Q Consensus 75 ~l~~N~l~g~ip~~~~~l~~l~~l~l~~N-~l~g~-ip~~--~~~~l~~l~ls~N-~l~g~-ip~~-~~~~-~~~~~~~~ 146 (582)
+|++|.+++.+|..++.+++|++|+|++| .+++. +|.. .+++|+.|+|++| .+++. +|.. ..++ .+..++++
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 99999999999999999999999999999 78873 6653 6899999999999 99864 4432 3455 67777777
Q ss_pred CCC
Q 047954 147 NNP 149 (582)
Q Consensus 147 ~n~ 149 (582)
+|.
T Consensus 204 ~~~ 206 (336)
T 2ast_B 204 GYR 206 (336)
T ss_dssp SCG
T ss_pred CCc
Confidence 763
No 388
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.96 E-value=8.9e-10 Score=113.05 Aligned_cols=145 Identities=15% Similarity=0.246 Sum_probs=104.8
Q ss_pred ccccccCceEEEEEEEcCCceEEEEEec--CCCc-chHHHHHHHHHHHhcCC--CCCccccceEEEeC---CeeEEEEEe
Q 047954 274 EGLGKGIFGNSYKALLEGRAPVVVKRLR--DLKP-LITEEFRKQLLVIADQK--HPNLLPLLAYYFSN---DEKLLVYKF 345 (582)
Q Consensus 274 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~--~~~~-~~~~~~~~e~~~l~~l~--H~niv~l~~~~~~~---~~~~lv~e~ 345 (582)
+.|+.|.++.||+....+ ..+++|+.. .... .....+.+|+.+++.+. +..+.++++++.+. +..++||||
T Consensus 44 ~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~ 122 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF 122 (359)
T ss_dssp EECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred EEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence 468999999999998765 568888765 3221 12356788999998886 45678888888766 347999999
Q ss_pred CCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCC--------------------------------
Q 047954 346 AGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSR-------------------------------- 393 (582)
Q Consensus 346 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-------------------------------- 393 (582)
+++..+.+.. ...++...+..++.++++.|..||+...+.
T Consensus 123 v~G~~l~~~~--------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (359)
T 3dxp_A 123 VSGRVLWDQS--------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI 194 (359)
T ss_dssp CCCBCCCCTT--------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred cCCeecCCCc--------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence 9987774321 113667778889999999999999843211
Q ss_pred -------------------CCCcceecCCCCCCeeecCCCc--eEEeeccccccc
Q 047954 394 -------------------TQSAVIHGNLKSTNILLDDNEM--VLVSDYGFSSLV 427 (582)
Q Consensus 394 -------------------~~~~ivH~Dlkp~NILl~~~~~--~kl~DfG~a~~~ 427 (582)
....++|+|+++.|||++.++. +.|.||+.+..-
T Consensus 195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 0256999999999999997753 689999988653
No 389
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.91 E-value=6e-10 Score=111.55 Aligned_cols=184 Identities=17% Similarity=0.200 Sum_probs=120.0
Q ss_pred ccccccCceEEEEEEEcCCceEEEEEecCCCcchHHHHHHHHHHHhcCC-CCC--ccccceEEEeCC---eeEEEEEeCC
Q 047954 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQK-HPN--LLPLLAYYFSND---EKLLVYKFAG 347 (582)
Q Consensus 274 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-H~n--iv~l~~~~~~~~---~~~lv~e~~~ 347 (582)
+.++.|.+..||+.. ..+++|..... .....+.+|.++++.+. +.. +.+++.+..... ..|+|||+++
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 458999999999863 45888886432 34567889999998873 332 233443332222 3478999999
Q ss_pred CCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCC-----------------------------------
Q 047954 348 NGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKS----------------------------------- 392 (582)
Q Consensus 348 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~----------------------------------- 392 (582)
|.+|.+.... .++..++..++.++++.|..||+...+
T Consensus 100 G~~l~~~~~~--------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (304)
T 3sg8_A 100 GVPLTPLLLN--------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMK 171 (304)
T ss_dssp CEECCHHHHH--------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHH
T ss_pred CeECCccccc--------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHH
Confidence 9888654321 256677788888999999998873210
Q ss_pred ----------------CCCCcceecCCCCCCeeecC--CCceEEeeccccccccCcccccccc----------------c
Q 047954 393 ----------------RTQSAVIHGNLKSTNILLDD--NEMVLVSDYGFSSLVAQPIAAQRMI----------------S 438 (582)
Q Consensus 393 ----------------~~~~~ivH~Dlkp~NILl~~--~~~~kl~DfG~a~~~~~~~~~~~~~----------------~ 438 (582)
...+.++|+|+++.||++++ ...+.|+||+.+..-.......... .
T Consensus 172 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~ 251 (304)
T 3sg8_A 172 KVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNH 251 (304)
T ss_dssp HHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHH
Confidence 11246899999999999998 4567899999876533211100000 1
Q ss_pred c--cC-CCCCCCCCCCcchhHHHHHHHHHHHHhCCCCC
Q 047954 439 Y--KS-PEYQSSKKISRKSDVWSFGCLLLELLTGRIST 473 (582)
Q Consensus 439 y--~a-PE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~ 473 (582)
| .. |+... ......+.|++|.++|.+.+|..+|
T Consensus 252 Y~~~~~~~~~~--r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 252 YKHKDIPTVLE--KYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HTCSCHHHHHH--HHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred cCCCCcHHHHH--HHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 2 11 11110 1122368999999999999998765
No 390
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.90 E-value=5.9e-11 Score=115.49 Aligned_cols=125 Identities=18% Similarity=0.246 Sum_probs=88.0
Q ss_pred CCCcceeeeCCCCCeEEEEEeCC---CcceeccCcccc-----------------------CCCCCCcE--EEccCCc--
Q 047954 8 PSQWYGIQCDINSAHVTGIVLED---MRLNGEIKSDAF-----------------------ADIPELIV--INFKNNI-- 57 (582)
Q Consensus 8 ~~~w~gv~c~~~~~~~~~l~l~~---~~l~g~ip~~~~-----------------------~~l~~L~~--l~l~~n~-- 57 (582)
.|.|.|+.|+.++-+|+.+...+ ..+.|.++++.+ ...+.|.. ++++.|.
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~~ 156 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRS 156 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHHHHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSHH
T ss_pred HHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHHHHHhccchhccccCHHHcCCCcchhhcCccccCCHHH
Confidence 46799999986666787777766 455566654432 12223333 4555552
Q ss_pred -cccccCCC-CCCCCCCEEeCCCCcccc--cccccccCCCcCCeeecccCcccCC--CCCC-CCCCCCEEEeecCccccc
Q 047954 58 -ISGNFMNF-SSNHKLKDIDLSGNKFYG--EISRSLLSLKFLESLQLQNNNLTGP--VPEF-NQSSLKVFNVSNNNLSGS 130 (582)
Q Consensus 58 -~~g~~~~~-~~~~~l~~l~l~~N~l~g--~ip~~~~~l~~l~~l~l~~N~l~g~--ip~~-~~~~l~~l~ls~N~l~g~ 130 (582)
+.+.+... .++++|+.|+||+|+|++ .||..+..+++|+.|+|++|+|++. +... .+ +|+.|+|++|.+++.
T Consensus 157 ~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~l~~l-~L~~L~L~~Npl~~~ 235 (267)
T 3rw6_A 157 CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGL-KLEELWLDGNSLCDT 235 (267)
T ss_dssp HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGGGTTS-CCSEEECTTSTTGGG
T ss_pred HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhhcccC-CcceEEccCCcCccc
Confidence 22222211 356789999999999999 7888889999999999999999974 2222 23 899999999999998
Q ss_pred CCC
Q 047954 131 IPK 133 (582)
Q Consensus 131 ip~ 133 (582)
+|.
T Consensus 236 ~~~ 238 (267)
T 3rw6_A 236 FRD 238 (267)
T ss_dssp CSS
T ss_pred cCc
Confidence 884
No 391
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.89 E-value=1.9e-10 Score=119.35 Aligned_cols=130 Identities=23% Similarity=0.260 Sum_probs=99.3
Q ss_pred CCeEEEEEeCCCcceeccCc---cccCCCCCCcEEEccCC---ccccccCC--------CCCCCCCCEEeCCCCcccc--
Q 047954 20 SAHVTGIVLEDMRLNGEIKS---DAFADIPELIVINFKNN---IISGNFMN--------FSSNHKLKDIDLSGNKFYG-- 83 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~---~~~~~l~~L~~l~l~~n---~~~g~~~~--------~~~~~~l~~l~l~~N~l~g-- 83 (582)
.++++.|+|++|++++..+. ..+..+++|+.|+|++| +++|.+|. +..+++|++|+|++|.+++
T Consensus 31 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~ 110 (386)
T 2ca6_A 31 DDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTA 110 (386)
T ss_dssp CSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTT
T ss_pred CCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHH
Confidence 35689999999999876322 23678999999999984 66677653 3678899999999999998
Q ss_pred --cccccccCCCcCCeeecccCcccCCCCCC------CC---------CCCCEEEeecCccc-ccCCCC----Ccccccc
Q 047954 84 --EISRSLLSLKFLESLQLQNNNLTGPVPEF------NQ---------SSLKVFNVSNNNLS-GSIPKT----QTLQLFR 141 (582)
Q Consensus 84 --~ip~~~~~l~~l~~l~l~~N~l~g~ip~~------~~---------~~l~~l~ls~N~l~-g~ip~~----~~~~~~~ 141 (582)
.+|..+.++++|++|+|++|.+++..+.. .+ ++|+.|+|++|.++ +.+|.. ..+..+.
T Consensus 111 ~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~ 190 (386)
T 2ca6_A 111 QEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLH 190 (386)
T ss_dssp HHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCC
T ss_pred HHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcC
Confidence 68889999999999999999997544431 22 78999999999997 556531 2345677
Q ss_pred cccccCCC
Q 047954 142 SYSYSNNP 149 (582)
Q Consensus 142 ~~~~~~n~ 149 (582)
.+++++|.
T Consensus 191 ~L~L~~n~ 198 (386)
T 2ca6_A 191 TVKMVQNG 198 (386)
T ss_dssp EEECCSSC
T ss_pred EEECcCCC
Confidence 77888774
No 392
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.84 E-value=8.7e-10 Score=113.28 Aligned_cols=107 Identities=22% Similarity=0.251 Sum_probs=53.9
Q ss_pred EEEEEeCCCcceeccCc---cccCCCC-CCcEEEccCCccccccC-CCCCC-----CCCCEEeCCCCcccccccccccCC
Q 047954 23 VTGIVLEDMRLNGEIKS---DAFADIP-ELIVINFKNNIISGNFM-NFSSN-----HKLKDIDLSGNKFYGEISRSLLSL 92 (582)
Q Consensus 23 ~~~l~l~~~~l~g~ip~---~~~~~l~-~L~~l~l~~n~~~g~~~-~~~~~-----~~l~~l~l~~N~l~g~ip~~~~~l 92 (582)
++.|+|++|++++.-+. ..+..++ +|+.|+|++|.+++..+ .+..+ ++|+.|+|++|.+++..+..+..+
T Consensus 24 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~ 103 (362)
T 3goz_A 24 VTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKT 103 (362)
T ss_dssp CCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHH
T ss_pred ceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHH
Confidence 55566666655543210 2344455 56666666665555432 12221 556666666666655555533332
Q ss_pred -----CcCCeeecccCcccCCCCCC------C-CCCCCEEEeecCcccc
Q 047954 93 -----KFLESLQLQNNNLTGPVPEF------N-QSSLKVFNVSNNNLSG 129 (582)
Q Consensus 93 -----~~l~~l~l~~N~l~g~ip~~------~-~~~l~~l~ls~N~l~g 129 (582)
++|++|+|++|.+++..+.. . .++|+.|+|++|.+++
T Consensus 104 l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~ 152 (362)
T 3goz_A 104 LAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGI 152 (362)
T ss_dssp HHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGG
T ss_pred HHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCH
Confidence 55666666666655443321 1 2356666666665553
No 393
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.78 E-value=9.4e-10 Score=113.04 Aligned_cols=125 Identities=15% Similarity=0.128 Sum_probs=97.4
Q ss_pred EEEeCCCcceeccCccccCCCCCCcEEEccCCccccccC-----CCCCCC-CCCEEeCCCCcccccccccccCC-----C
Q 047954 25 GIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFM-----NFSSNH-KLKDIDLSGNKFYGEISRSLLSL-----K 93 (582)
Q Consensus 25 ~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~-----~~~~~~-~l~~l~l~~N~l~g~ip~~~~~l-----~ 93 (582)
.+.|+.|+++|.+| +.+...++|+.|+|++|.+++..+ .+..++ +|+.|+|++|.+++..+..+..+ +
T Consensus 2 ~~~ls~n~~~~~~~-~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 80 (362)
T 3goz_A 2 NYKLTLHPGSNPVE-EFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPA 80 (362)
T ss_dssp EEECCCCTTCCHHH-HHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCT
T ss_pred ccccccccchHHHH-HHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCC
Confidence 35788999999885 456667779999999999988764 355666 89999999999999888888775 8
Q ss_pred cCCeeecccCcccCCCCCC------CC-CCCCEEEeecCcccccCCCCC-----c-ccccccccccCCCC
Q 047954 94 FLESLQLQNNNLTGPVPEF------NQ-SSLKVFNVSNNNLSGSIPKTQ-----T-LQLFRSYSYSNNPY 150 (582)
Q Consensus 94 ~l~~l~l~~N~l~g~ip~~------~~-~~l~~l~ls~N~l~g~ip~~~-----~-~~~~~~~~~~~n~~ 150 (582)
+|++|+|++|.+++..+.. .+ ++|+.|+|++|.+++..+... . ...+..+++++|..
T Consensus 81 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l 150 (362)
T 3goz_A 81 NVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDL 150 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCG
T ss_pred CccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcC
Confidence 9999999999999877651 33 789999999999976554321 1 14677788888854
No 394
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.67 E-value=4.3e-08 Score=100.09 Aligned_cols=109 Identities=14% Similarity=0.056 Sum_probs=75.5
Q ss_pred CCeEEEEEeCCCcceeccCccccCCCCCCcE-EEccCCccccccCC-CCCCCCCCEEeCCCCcccccccccccCCCcCCe
Q 047954 20 SAHVTGIVLEDMRLNGEIKSDAFADIPELIV-INFKNNIISGNFMN-FSSNHKLKDIDLSGNKFYGEISRSLLSLKFLES 97 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~-l~l~~n~~~g~~~~-~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~ 97 (582)
.++++.|+|++|++.+.||+..+.++++|.. +.++.|++++..|. +..+++|++|+|++|++++..+..+....++..
T Consensus 53 l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~ 132 (350)
T 4ay9_X 53 FGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVL 132 (350)
T ss_dssp CTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEE
T ss_pred CCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhh
Confidence 4679999999999999999888889988775 66778999888774 688899999999999988766655555555555
Q ss_pred eecccCcccCCCCCC---CC-CCCCEEEeecCccc
Q 047954 98 LQLQNNNLTGPVPEF---NQ-SSLKVFNVSNNNLS 128 (582)
Q Consensus 98 l~l~~N~l~g~ip~~---~~-~~l~~l~ls~N~l~ 128 (582)
|++++|+--..+|.. .+ ..|+.|+|++|+++
T Consensus 133 l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~ 167 (350)
T 4ay9_X 133 LDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ 167 (350)
T ss_dssp EEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC
T ss_pred hhhccccccccccccchhhcchhhhhhcccccccc
Confidence 555443332333331 11 23444555555554
No 395
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.62 E-value=2e-07 Score=93.85 Aligned_cols=137 Identities=13% Similarity=0.182 Sum_probs=99.4
Q ss_pred cccccccCceEEEEEEEcCCceEEEEEecCCCcchHHHHHHHHHHHhcCCC----CCccccceEEEeCCeeEEEEEeCCC
Q 047954 273 AEGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKH----PNLLPLLAYYFSNDEKLLVYKFAGN 348 (582)
Q Consensus 273 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H----~niv~l~~~~~~~~~~~lv~e~~~~ 348 (582)
.+.++.|....||+. +..+++|.... ......+.+|.+++..+.+ ..+.+++++ +..++||||++|
T Consensus 42 v~~l~~G~~n~vy~v----g~~~vlR~~~~--~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G 111 (320)
T 3r70_A 42 LRYLSSGDDSDTFLC----NEQYVVKVPKR--DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKG 111 (320)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCC
T ss_pred EEeCCCCCCceEEEE----CCEEEEEeCCc--HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCC
Confidence 356899999999998 56688887643 2224568899998888865 123444443 567899999999
Q ss_pred CChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCC------------------------------------
Q 047954 349 GNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKS------------------------------------ 392 (582)
Q Consensus 349 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~------------------------------------ 392 (582)
.++...... .++..++..++.++++.|..||+...+
T Consensus 112 ~~l~~~~~~--------~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (320)
T 3r70_A 112 ERITYEQYH--------KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTD 183 (320)
T ss_dssp BCCCHHHHT--------TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCH
T ss_pred ccccccccc--------cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccc
Confidence 888643321 255666778888899999988865432
Q ss_pred --------------------CCCCcceecCCCCCCeeecCCCceEEeeccccccc
Q 047954 393 --------------------RTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLV 427 (582)
Q Consensus 393 --------------------~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~ 427 (582)
...+.++|+|++|.|||++.+..+.|.||+.+..-
T Consensus 184 ~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 184 EMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred cchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 11234699999999999998666799999987543
No 396
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.60 E-value=3.5e-09 Score=112.21 Aligned_cols=129 Identities=19% Similarity=0.201 Sum_probs=72.8
Q ss_pred CeEEEEEeCCCcceec----cCccccCCCCCCcEEEccCCccccc----cC-CCCCCCCCCEEeCCCCcccccccccccC
Q 047954 21 AHVTGIVLEDMRLNGE----IKSDAFADIPELIVINFKNNIISGN----FM-NFSSNHKLKDIDLSGNKFYGEISRSLLS 91 (582)
Q Consensus 21 ~~~~~l~l~~~~l~g~----ip~~~~~~l~~L~~l~l~~n~~~g~----~~-~~~~~~~l~~l~l~~N~l~g~ip~~~~~ 91 (582)
.+++.|+|++|.+++. +.+.....+++|+.|+|++|.+++. ++ .+..+++|+.|+|++|.+++..+..+..
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 306 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE 306 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH
Confidence 4577777777777653 2222233567777777777777764 33 2445666777777777666554444432
Q ss_pred C-----CcCCeeecccCcccCC----CCCC--CCCCCCEEEeecCcccccCCCCC------cccccccccccCCC
Q 047954 92 L-----KFLESLQLQNNNLTGP----VPEF--NQSSLKVFNVSNNNLSGSIPKTQ------TLQLFRSYSYSNNP 149 (582)
Q Consensus 92 l-----~~l~~l~l~~N~l~g~----ip~~--~~~~l~~l~ls~N~l~g~ip~~~------~~~~~~~~~~~~n~ 149 (582)
. ++|+.|+|++|.+++. +|.. .+++|+.|+|++|.+++..+... ....+..+++++|.
T Consensus 307 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~ 381 (461)
T 1z7x_W 307 TLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCD 381 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSC
T ss_pred HhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCC
Confidence 2 4666677776666654 2322 34666666666666655432210 02345555565553
No 397
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.53 E-value=4.4e-09 Score=111.44 Aligned_cols=129 Identities=14% Similarity=0.182 Sum_probs=102.2
Q ss_pred CCeEEEEEeCCCcceec----cCccccCCCCCCcEEEccCCcccccc-----CC-CCCCCCCCEEeCCCCccccc----c
Q 047954 20 SAHVTGIVLEDMRLNGE----IKSDAFADIPELIVINFKNNIISGNF-----MN-FSSNHKLKDIDLSGNKFYGE----I 85 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~----ip~~~~~~l~~L~~l~l~~n~~~g~~-----~~-~~~~~~l~~l~l~~N~l~g~----i 85 (582)
..+++.|+|++|++++. ++ ..+..+++|+.|+|++|.+++.- +. +..+++|+.|+|++|.+++. +
T Consensus 198 ~~~L~~L~L~~n~l~~~~~~~l~-~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l 276 (461)
T 1z7x_W 198 PCQLEALKLESCGVTSDNCRDLC-GIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDL 276 (461)
T ss_dssp CCCCCEEECTTSCCBTTHHHHHH-HHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHH
T ss_pred CCCceEEEccCCCCcHHHHHHHH-HHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHH
Confidence 35799999999999873 54 34778999999999999998752 22 33578999999999999986 8
Q ss_pred cccccCCCcCCeeecccCcccCCCCCC-------CCCCCCEEEeecCccccc----CCCC-CcccccccccccCCC
Q 047954 86 SRSLLSLKFLESLQLQNNNLTGPVPEF-------NQSSLKVFNVSNNNLSGS----IPKT-QTLQLFRSYSYSNNP 149 (582)
Q Consensus 86 p~~~~~l~~l~~l~l~~N~l~g~ip~~-------~~~~l~~l~ls~N~l~g~----ip~~-~~~~~~~~~~~~~n~ 149 (582)
|..+.++++|++|+|++|.+++.-+.. ..++|+.|+|++|.+++. +|.. ..+..+..+++++|.
T Consensus 277 ~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~ 352 (461)
T 1z7x_W 277 CRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNR 352 (461)
T ss_dssp HHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSB
T ss_pred HHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCc
Confidence 888999999999999999997654431 336999999999999875 3322 234677888888884
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.51 E-value=5.6e-09 Score=107.45 Aligned_cols=130 Identities=12% Similarity=0.127 Sum_probs=89.9
Q ss_pred CeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCC-----C-CCCCCCCEEeCCCCcccc----ccccccc
Q 047954 21 AHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMN-----F-SSNHKLKDIDLSGNKFYG----EISRSLL 90 (582)
Q Consensus 21 ~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~-----~-~~~~~l~~l~l~~N~l~g----~ip~~~~ 90 (582)
..++.|+|++|+++..-.......+++|+.|+|++|.++..-.. + ..+.+|+.|+|++|.++. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 57889999999886543222233467888999999988765321 1 345789999999999875 4566667
Q ss_pred CCCcCCeeecccCcccCC----CCC--CCCCCCCEEEeecCccccc----CCCC-CcccccccccccCCCC
Q 047954 91 SLKFLESLQLQNNNLTGP----VPE--FNQSSLKVFNVSNNNLSGS----IPKT-QTLQLFRSYSYSNNPY 150 (582)
Q Consensus 91 ~l~~l~~l~l~~N~l~g~----ip~--~~~~~l~~l~ls~N~l~g~----ip~~-~~~~~~~~~~~~~n~~ 150 (582)
.+++|++|||++|.++.. ++. ...++|+.|+|++|.++.. ++.. .....+..+++++|..
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i 251 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNEL 251 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSC
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCC
Confidence 888999999999998752 122 1456899999999998752 1111 1235677788888853
No 399
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.47 E-value=1.1e-06 Score=86.80 Aligned_cols=74 Identities=18% Similarity=0.222 Sum_probs=59.4
Q ss_pred ccccccCceEEEEEEEcCCceEEEEEecCCCcchHHHHHHHHHHHhcCCCC---CccccceEEEeCCeeEEEEEeCCCCC
Q 047954 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHP---NLLPLLAYYFSNDEKLLVYKFAGNGN 350 (582)
Q Consensus 274 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~---niv~l~~~~~~~~~~~lv~e~~~~gs 350 (582)
+.|+.|.++.||++...++..+++|+...........|..|++.|+.+.+. .+.+++++. ..++||||++++.
T Consensus 21 ~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~~ 96 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred eeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccCC
Confidence 468999999999999988999999997543333346789999999999775 567777653 4689999999987
Q ss_pred h
Q 047954 351 L 351 (582)
Q Consensus 351 L 351 (582)
+
T Consensus 97 ~ 97 (288)
T 3d1u_A 97 P 97 (288)
T ss_dssp C
T ss_pred C
Confidence 5
No 400
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.43 E-value=1.6e-06 Score=84.67 Aligned_cols=138 Identities=15% Similarity=0.188 Sum_probs=97.9
Q ss_pred cccccCce-EEEEEEEc-CCceEEEEEecCCCcchHHHHHHHHHHHhcCC-CCCccccceEEEeCCeeEEEEEeCCCCCh
Q 047954 275 GLGKGIFG-NSYKALLE-GRAPVVVKRLRDLKPLITEEFRKQLLVIADQK-HPNLLPLLAYYFSNDEKLLVYKFAGNGNL 351 (582)
Q Consensus 275 ~lG~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~~~~gsL 351 (582)
.+..|..+ .||+.... ++..+++|+-.. .....+.+|...|+.+. +--+.++++++.+.+..++|||++++.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 34455555 68987754 456788888643 24566888999888773 33367788999999999999999999888
Q ss_pred HHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCC---------------------------------------
Q 047954 352 FNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKS--------------------------------------- 392 (582)
Q Consensus 352 ~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~--------------------------------------- 392 (582)
.+..... ......++.+++..|.-||....+
T Consensus 108 ~~~~~~~----------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (272)
T 4gkh_A 108 FQVLEEY----------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVE 177 (272)
T ss_dssp HHHHHHC----------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHH
T ss_pred cccccCC----------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHH
Confidence 7765321 223445667777777777764211
Q ss_pred ------------CCCCcceecCCCCCCeeecCCCceEEeeccccc
Q 047954 393 ------------RTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSS 425 (582)
Q Consensus 393 ------------~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~ 425 (582)
.....++|+|+.+.|||+++++.+-|.||+.+.
T Consensus 178 ~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 178 QVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 112347999999999999987767799998764
No 401
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.42 E-value=1.2e-06 Score=87.63 Aligned_cols=139 Identities=16% Similarity=0.138 Sum_probs=97.2
Q ss_pred ccccccCceEEEEEEEcCCceEEEEEecCCCcchHHHHHHHHHHHhcCCCC---CccccceEEE-eCCeeEEEEEeCCCC
Q 047954 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHP---NLLPLLAYYF-SNDEKLLVYKFAGNG 349 (582)
Q Consensus 274 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~---niv~l~~~~~-~~~~~~lv~e~~~~g 349 (582)
+.++.|....||+. +..+++|.-. .......+..|.++|..+.+. .+.+.+.++. ..+..++||||++|.
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~ 98 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ 98 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred eecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence 45788888899988 4668888853 223456788999999998653 2456666664 345578999999998
Q ss_pred ChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCC-------------------------------------
Q 047954 350 NLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKS------------------------------------- 392 (582)
Q Consensus 350 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~------------------------------------- 392 (582)
.+.+.... .++...+..++.++++.|..||+...+
T Consensus 99 ~l~~~~~~--------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~ 170 (306)
T 3tdw_A 99 ILGEDGMA--------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRD 170 (306)
T ss_dssp ECHHHHHT--------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHH
T ss_pred ECchhhhh--------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHH
Confidence 88764321 234555666677777777777764310
Q ss_pred ----------------CCCCcceecCCCCCCeeecC---CCc-eEEeecccccc
Q 047954 393 ----------------RTQSAVIHGNLKSTNILLDD---NEM-VLVSDYGFSSL 426 (582)
Q Consensus 393 ----------------~~~~~ivH~Dlkp~NILl~~---~~~-~kl~DfG~a~~ 426 (582)
...+.++|+|+++.|||++. ++. +.|+||+.+..
T Consensus 171 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 171 YLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 02345799999999999997 455 47999997754
No 402
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.39 E-value=2e-07 Score=90.48 Aligned_cols=77 Identities=31% Similarity=0.438 Sum_probs=64.2
Q ss_pred CCCCCCcEEEccCCcccc--ccCC-CCCCCCCCEEeCCCCcccccccccccCCC--cCCeeecccCcccCCCCC------
Q 047954 43 ADIPELIVINFKNNIISG--NFMN-FSSNHKLKDIDLSGNKFYGEISRSLLSLK--FLESLQLQNNNLTGPVPE------ 111 (582)
Q Consensus 43 ~~l~~L~~l~l~~n~~~g--~~~~-~~~~~~l~~l~l~~N~l~g~ip~~~~~l~--~l~~l~l~~N~l~g~ip~------ 111 (582)
.++++|+.|+|++|.|++ .+|. +..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+++.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 468999999999999999 5664 46789999999999999986 4455555 999999999999999984
Q ss_pred ---CCCCCCCEEE
Q 047954 112 ---FNQSSLKVFN 121 (582)
Q Consensus 112 ---~~~~~l~~l~ 121 (582)
..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 1567888776
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.33 E-value=9.4e-08 Score=98.29 Aligned_cols=110 Identities=17% Similarity=0.227 Sum_probs=84.3
Q ss_pred CeEEEEEeCCCcceeccCcc---cc-CCCCCCcEEEccCCccccc----cC-CCCCCCCCCEEeCCCCcccc----cccc
Q 047954 21 AHVTGIVLEDMRLNGEIKSD---AF-ADIPELIVINFKNNIISGN----FM-NFSSNHKLKDIDLSGNKFYG----EISR 87 (582)
Q Consensus 21 ~~~~~l~l~~~~l~g~ip~~---~~-~~l~~L~~l~l~~n~~~g~----~~-~~~~~~~l~~l~l~~N~l~g----~ip~ 87 (582)
.+++.|+|++|+++..-... .+ ...+.|+.|+|++|.++.. ++ .+..+++|++|||++|.++. .++.
T Consensus 126 ~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~ 205 (372)
T 3un9_A 126 LRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAA 205 (372)
T ss_dssp HTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHH
T ss_pred HhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHH
Confidence 35899999999997542111 12 3568999999999999863 22 24567889999999999985 3567
Q ss_pred cccCCCcCCeeecccCcccCC----CCCC--CCCCCCEEEeecCccccc
Q 047954 88 SLLSLKFLESLQLQNNNLTGP----VPEF--NQSSLKVFNVSNNNLSGS 130 (582)
Q Consensus 88 ~~~~l~~l~~l~l~~N~l~g~----ip~~--~~~~l~~l~ls~N~l~g~ 130 (582)
.+..+++|+.|+|++|+++.. ++.. ..++|+.|||++|.++..
T Consensus 206 ~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 206 QLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp HGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred HHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 788889999999999999753 2221 457899999999998753
No 404
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.19 E-value=6.7e-08 Score=105.75 Aligned_cols=129 Identities=9% Similarity=-0.017 Sum_probs=80.6
Q ss_pred CeEEEEEeCCCcceeccCccccCCCCCCcEEEcc----CCccccc-----cCC-CCCCCCCCEEeCCC--Cccccccccc
Q 047954 21 AHVTGIVLEDMRLNGEIKSDAFADIPELIVINFK----NNIISGN-----FMN-FSSNHKLKDIDLSG--NKFYGEISRS 88 (582)
Q Consensus 21 ~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~----~n~~~g~-----~~~-~~~~~~l~~l~l~~--N~l~g~ip~~ 88 (582)
++++.|+|..|++++..+......+++|+.|+|+ .|.+++. ++. +.++++|+.|+|++ |.+++..+..
T Consensus 378 ~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~ 457 (592)
T 3ogk_B 378 QELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSY 457 (592)
T ss_dssp TTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHH
T ss_pred ccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHH
Confidence 4566666666666665543322236777777775 6666663 221 34567777777763 3467666666
Q ss_pred ccC-CCcCCeeecccCcccC-CCCC--CCCCCCCEEEeecCccccc-CCCC-CcccccccccccCCC
Q 047954 89 LLS-LKFLESLQLQNNNLTG-PVPE--FNQSSLKVFNVSNNNLSGS-IPKT-QTLQLFRSYSYSNNP 149 (582)
Q Consensus 89 ~~~-l~~l~~l~l~~N~l~g-~ip~--~~~~~l~~l~ls~N~l~g~-ip~~-~~~~~~~~~~~~~n~ 149 (582)
++. +++|+.|+|++|++++ .+|. ..+++|+.|+|++|.|++. ++.. ..++.+..+++++|.
T Consensus 458 ~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~ 524 (592)
T 3ogk_B 458 IGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYR 524 (592)
T ss_dssp HHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCB
T ss_pred HHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCc
Confidence 654 7778888888888776 3343 2567788888888887654 2221 235566777777775
No 405
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.17 E-value=7.7e-06 Score=83.60 Aligned_cols=73 Identities=14% Similarity=0.032 Sum_probs=53.8
Q ss_pred ccccccCceEEEEEEEcCCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCC--ccccceEEEeC-CeeEEEEEeCCCCC
Q 047954 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPN--LLPLLAYYFSN-DEKLLVYKFAGNGN 350 (582)
Q Consensus 274 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l~~~~~~~-~~~~lv~e~~~~gs 350 (582)
+.++.|....+|+... ++..+++|..... ..+..|..++..+.... +.++++++... +..++||||+++.+
T Consensus 47 ~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~ 120 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVT 120 (362)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEE
T ss_pred EECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCC
Confidence 4588899999999875 4677888887432 25788888888875533 45677776654 56899999999765
Q ss_pred hH
Q 047954 351 LF 352 (582)
Q Consensus 351 L~ 352 (582)
+.
T Consensus 121 l~ 122 (362)
T 3ovc_A 121 LQ 122 (362)
T ss_dssp TT
T ss_pred cc
Confidence 53
No 406
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.09 E-value=5.7e-07 Score=82.73 Aligned_cols=107 Identities=15% Similarity=0.206 Sum_probs=57.3
Q ss_pred CeEEEEEeCCC-cceec----cCccccCCCCCCcEEEccCCccccc----cC-CCCCCCCCCEEeCCCCccccc----cc
Q 047954 21 AHVTGIVLEDM-RLNGE----IKSDAFADIPELIVINFKNNIISGN----FM-NFSSNHKLKDIDLSGNKFYGE----IS 86 (582)
Q Consensus 21 ~~~~~l~l~~~-~l~g~----ip~~~~~~l~~L~~l~l~~n~~~g~----~~-~~~~~~~l~~l~l~~N~l~g~----ip 86 (582)
..++.|+|++| ++... + ...+...+.|++|+|++|.++.. +. .+..+++|+.|+|++|.++.. |.
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l-~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKAC-AEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHH-HHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHH-HHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 45666666666 55421 2 12244456666666666666542 11 133445566666666666543 44
Q ss_pred ccccCCCcCCeeec--ccCcccCCCC----CC--CCCCCCEEEeecCccc
Q 047954 87 RSLLSLKFLESLQL--QNNNLTGPVP----EF--NQSSLKVFNVSNNNLS 128 (582)
Q Consensus 87 ~~~~~l~~l~~l~l--~~N~l~g~ip----~~--~~~~l~~l~ls~N~l~ 128 (582)
..+...+.|++|+| ++|.++..-- .. ..++|+.|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 55555566666666 5566653211 10 2355666666666653
No 407
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.04 E-value=4e-06 Score=85.51 Aligned_cols=79 Identities=9% Similarity=0.008 Sum_probs=53.1
Q ss_pred ccc-cccCceEEEEEEEc-------CCceEEEEEecCCC---cchHHHHHHHHHHHhcCCC---CCccccceEEEeC---
Q 047954 274 EGL-GKGIFGNSYKALLE-------GRAPVVVKRLRDLK---PLITEEFRKQLLVIADQKH---PNLLPLLAYYFSN--- 336 (582)
Q Consensus 274 ~~l-G~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~H---~niv~l~~~~~~~--- 336 (582)
+.| +.|....+|+.... ++..+++|...... ......+..|+.+++.+.. -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 457 78889999998765 25678888764322 0012456778888777632 3566778777654
Q ss_pred CeeEEEEEeCCCCChH
Q 047954 337 DEKLLVYKFAGNGNLF 352 (582)
Q Consensus 337 ~~~~lv~e~~~~gsL~ 352 (582)
+..++||||++|..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 3468999999987654
No 408
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=97.92 E-value=4.2e-06 Score=91.42 Aligned_cols=101 Identities=10% Similarity=0.171 Sum_probs=68.9
Q ss_pred eEEEEEeCCCc-cee-ccCccccCCCCCCcEEEccCCccccc----cCC-CCCCCCCCEEeCCCCccc----cccccccc
Q 047954 22 HVTGIVLEDMR-LNG-EIKSDAFADIPELIVINFKNNIISGN----FMN-FSSNHKLKDIDLSGNKFY----GEISRSLL 90 (582)
Q Consensus 22 ~~~~l~l~~~~-l~g-~ip~~~~~~l~~L~~l~l~~n~~~g~----~~~-~~~~~~l~~l~l~~N~l~----g~ip~~~~ 90 (582)
+++.|+|+++. ++. .+ ......+++|++|+|++|.+++. ++. ..++++|+.|+|++|.++ +.++..+.
T Consensus 139 ~L~~L~L~~~~~~~~~~l-~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~ 217 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGL-LSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIAR 217 (592)
T ss_dssp GCCEEEEESCEEEEHHHH-HHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHH-HHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHh
Confidence 38888888776 221 12 12234678888888888887765 322 245677888888888887 56666677
Q ss_pred CCCcCCeeecccCcccCCCCCC--CCCCCCEEEeec
Q 047954 91 SLKFLESLQLQNNNLTGPVPEF--NQSSLKVFNVSN 124 (582)
Q Consensus 91 ~l~~l~~l~l~~N~l~g~ip~~--~~~~l~~l~ls~ 124 (582)
++++|+.|+|++|.+++ +|.. .+++|+.|+++.
T Consensus 218 ~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~ 252 (592)
T 3ogk_B 218 NCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGS 252 (592)
T ss_dssp HCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECB
T ss_pred hCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccc
Confidence 78888888888888776 4442 556777777765
No 409
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.88 E-value=5.2e-07 Score=98.68 Aligned_cols=126 Identities=11% Similarity=0.098 Sum_probs=64.9
Q ss_pred eEEEEEeCCCcceeccCccccCCCCCCcEEEcc--C----Ccccccc-----CC-CCCCCCCCEEeCCCCcccccccccc
Q 047954 22 HVTGIVLEDMRLNGEIKSDAFADIPELIVINFK--N----NIISGNF-----MN-FSSNHKLKDIDLSGNKFYGEISRSL 89 (582)
Q Consensus 22 ~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~--~----n~~~g~~-----~~-~~~~~~l~~l~l~~N~l~g~ip~~~ 89 (582)
+++.|.+..|++++..+......+++|+.|+|+ + |.+++.. +. +.++++|+.|+|++ ++++..+..+
T Consensus 373 ~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l 451 (594)
T 2p1m_B 373 KLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYI 451 (594)
T ss_dssp TCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHH
T ss_pred hHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHH
Confidence 455555555555544322222245666666666 2 4444211 11 33455666666655 5555555555
Q ss_pred cC-CCcCCeeecccCcccCCCCCC---CCCCCCEEEeecCcccccCCC-C-CcccccccccccCC
Q 047954 90 LS-LKFLESLQLQNNNLTGPVPEF---NQSSLKVFNVSNNNLSGSIPK-T-QTLQLFRSYSYSNN 148 (582)
Q Consensus 90 ~~-l~~l~~l~l~~N~l~g~ip~~---~~~~l~~l~ls~N~l~g~ip~-~-~~~~~~~~~~~~~n 148 (582)
+. +++|+.|+|++|.+++..+.. .+++|+.|+|++|.+++..+. . ..++.+..+++++|
T Consensus 452 ~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~ 516 (594)
T 2p1m_B 452 GTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSC 516 (594)
T ss_dssp HHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESS
T ss_pred HHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCC
Confidence 54 666777777766665543321 356667777777766443221 1 12445555555544
No 410
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.85 E-value=8.2e-05 Score=73.26 Aligned_cols=74 Identities=19% Similarity=0.256 Sum_probs=54.2
Q ss_pred ccccccCceEEEEEEEcCCceEEEEEecCCCcchHHHHHHHHHHHhcCCC---CCccccceEEEeCCeeEEEEEeCCCCC
Q 047954 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKH---PNLLPLLAYYFSNDEKLLVYKFAGNGN 350 (582)
Q Consensus 274 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H---~niv~l~~~~~~~~~~~lv~e~~~~gs 350 (582)
+.+|.|..+.||+....+|+.|++|+-..........|..|...|+.+.- --+.+++++ +..++||||+.++.
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~l~~~~ 96 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEECCCCCC
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEeecccC
Confidence 56899999999999999999999998765444444568889988887732 223444443 23478999998765
Q ss_pred h
Q 047954 351 L 351 (582)
Q Consensus 351 L 351 (582)
.
T Consensus 97 ~ 97 (288)
T 3f7w_A 97 P 97 (288)
T ss_dssp C
T ss_pred C
Confidence 3
No 411
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.84 E-value=2.2e-05 Score=81.27 Aligned_cols=74 Identities=12% Similarity=0.171 Sum_probs=48.1
Q ss_pred ccccccCceEEEEEEEc-CCceEEEEEecCCCc-------chHHHHHHHHHHHhcCCC--CCc-cccceEEEeCCeeEEE
Q 047954 274 EGLGKGIFGNSYKALLE-GRAPVVVKRLRDLKP-------LITEEFRKQLLVIADQKH--PNL-LPLLAYYFSNDEKLLV 342 (582)
Q Consensus 274 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~e~~~l~~l~H--~ni-v~l~~~~~~~~~~~lv 342 (582)
+.||.|.++.||++... ++..++||....... ...+.+..|.+++..+.. +.. .+++.+ +.+..++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence 56899999999999754 467899998643211 123456778888877632 333 345443 45567899
Q ss_pred EEeCCCC
Q 047954 343 YKFAGNG 349 (582)
Q Consensus 343 ~e~~~~g 349 (582)
|||+++.
T Consensus 114 mE~l~g~ 120 (397)
T 2olc_A 114 MEDLSHL 120 (397)
T ss_dssp ECCCTTS
T ss_pred EEeCCCc
Confidence 9999764
No 412
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.81 E-value=0.00025 Score=71.29 Aligned_cols=143 Identities=17% Similarity=0.166 Sum_probs=78.2
Q ss_pred ccccccCceEEEEEEEcCCceEEEEEecCCCcchHHHHHHHHHHHhcC-----CCCCccccc-e--EEEeCCeeEEEEEe
Q 047954 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQ-----KHPNLLPLL-A--YYFSNDEKLLVYKF 345 (582)
Q Consensus 274 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-----~H~niv~l~-~--~~~~~~~~~lv~e~ 345 (582)
+.|+.|..+.||+....++. +++|+.... .+....|..++..+ ..|.++... | +....+..++||+|
T Consensus 38 ~~l~gG~~n~~~~v~~~~~~-~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSGA-VCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTEE-EEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCCC-EEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 34666778999999876654 889988642 23333444444433 234444311 1 22346678999999
Q ss_pred CCCCChH--------------HHHhcCCCC---C-C----CCccchHHH-------------------------------
Q 047954 346 AGNGNLF--------------NRIHGGKSS---K-N----RIPFRCRSR------------------------------- 372 (582)
Q Consensus 346 ~~~gsL~--------------~~l~~~~~~---~-~----~~~l~~~~~------------------------------- 372 (582)
++|..+. ..+|..... . . ...-.|...
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986542 122211100 0 0 000122110
Q ss_pred HHHHHHHHHHHHHHhc--------c--CCCCCCCcceecCCCCCCeeecCCCceEEeeccccc
Q 047954 373 LLVARGVARALEYLHH--------K--DKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSS 425 (582)
Q Consensus 373 ~~i~~~ia~gL~yLH~--------~--~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~ 425 (582)
..+...+..++++|+. . . ...++|+|+.+.|||++.++.+.|+||+.+.
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKK----SPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHH----SCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccc----cCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111224456677763 0 1 2349999999999999888889999998653
No 413
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.72 E-value=0.0002 Score=71.29 Aligned_cols=74 Identities=16% Similarity=0.027 Sum_probs=58.3
Q ss_pred ccccccCceEEEEEEEcCCceEEEEEecCCCcchHHHHHHHHHHHhcCC---CCCccccceEEEeCCeeEEEEEeCCCCC
Q 047954 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQK---HPNLLPLLAYYFSNDEKLLVYKFAGNGN 350 (582)
Q Consensus 274 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---H~niv~l~~~~~~~~~~~lv~e~~~~gs 350 (582)
+.|+.|.+..+|+... ++..+++|..... ....+..|.+.|+.+. ...+.++++++...+..++||||+++..
T Consensus 42 ~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~ 117 (312)
T 3jr1_A 42 EKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSK 117 (312)
T ss_dssp EEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCC
T ss_pred EEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCC
Confidence 4588999999999876 4567888886532 3567888988888773 3668888988888888999999999876
Q ss_pred h
Q 047954 351 L 351 (582)
Q Consensus 351 L 351 (582)
+
T Consensus 118 ~ 118 (312)
T 3jr1_A 118 N 118 (312)
T ss_dssp C
T ss_pred C
Confidence 4
No 414
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.71 E-value=3.9e-06 Score=91.66 Aligned_cols=83 Identities=18% Similarity=0.245 Sum_probs=46.4
Q ss_pred CCCCCcEEEccCCccccccCC-CC-CCCCCCEEeCCCC-ccccc-ccccccCCCcCCeeecccCcccCCCCCC------C
Q 047954 44 DIPELIVINFKNNIISGNFMN-FS-SNHKLKDIDLSGN-KFYGE-ISRSLLSLKFLESLQLQNNNLTGPVPEF------N 113 (582)
Q Consensus 44 ~l~~L~~l~l~~n~~~g~~~~-~~-~~~~l~~l~l~~N-~l~g~-ip~~~~~l~~l~~l~l~~N~l~g~ip~~------~ 113 (582)
.+++|+.|+|++|.+++..+. +. .+++|+.|+|++| .++.. ++..+.++++|++|+|++|.+++..+.. .
T Consensus 103 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~ 182 (594)
T 2p1m_B 103 SYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDT 182 (594)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTT
T ss_pred hCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhc
Confidence 456666666666666655432 22 3556666666666 34332 4444445666666666666665543321 3
Q ss_pred CCCCCEEEeecCc
Q 047954 114 QSSLKVFNVSNNN 126 (582)
Q Consensus 114 ~~~l~~l~ls~N~ 126 (582)
+++|+.|+|++|.
T Consensus 183 ~~~L~~L~l~~~~ 195 (594)
T 2p1m_B 183 YTSLVSLNISCLA 195 (594)
T ss_dssp CCCCCEEECTTCC
T ss_pred CCcCcEEEecccC
Confidence 4566666666665
No 415
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.64 E-value=1.2e-05 Score=82.10 Aligned_cols=124 Identities=12% Similarity=0.141 Sum_probs=85.0
Q ss_pred CCeEEEEEeCCCc-ceeccCccccCCCCCCcEEEccCCccccccC-CC--CCCCCCCEEeCCC--Cccccc--c---ccc
Q 047954 20 SAHVTGIVLEDMR-LNGEIKSDAFADIPELIVINFKNNIISGNFM-NF--SSNHKLKDIDLSG--NKFYGE--I---SRS 88 (582)
Q Consensus 20 ~~~~~~l~l~~~~-l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~-~~--~~~~~l~~l~l~~--N~l~g~--i---p~~ 88 (582)
.+++..|.|++|. + .+++ +. +++|+.|+|..|.++.... .+ ..+++|+.|+|+. |...|. + -..
T Consensus 171 ~P~L~~L~L~g~~~l--~l~~--~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~ 245 (362)
T 2ra8_A 171 MPLLNNLKIKGTNNL--SIGK--KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPL 245 (362)
T ss_dssp CTTCCEEEEECCBTC--BCCS--CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGG
T ss_pred CCCCcEEEEeCCCCc--eecc--cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHH
Confidence 4679999998873 2 3443 33 8899999999888776542 22 3678899999863 333332 1 112
Q ss_pred c--cCCCcCCeeecccCcccCCCCC-----CCCCCCCEEEeecCccccc----CCCC-CcccccccccccCC
Q 047954 89 L--LSLKFLESLQLQNNNLTGPVPE-----FNQSSLKVFNVSNNNLSGS----IPKT-QTLQLFRSYSYSNN 148 (582)
Q Consensus 89 ~--~~l~~l~~l~l~~N~l~g~ip~-----~~~~~l~~l~ls~N~l~g~----ip~~-~~~~~~~~~~~~~n 148 (582)
+ ..+++|++|+|++|.+++..+. ..++.|+.|+||+|.+.+. ++.. ..+..+..+++++|
T Consensus 246 l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n 317 (362)
T 2ra8_A 246 FSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYN 317 (362)
T ss_dssp SCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSB
T ss_pred HhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCC
Confidence 2 3578999999999998864432 2478899999999999863 4433 34566777777766
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.60 E-value=1.8e-05 Score=72.59 Aligned_cols=89 Identities=20% Similarity=0.279 Sum_probs=69.3
Q ss_pred ccCCCCCCcEEEccCC-ccccc----c-CCCCCCCCCCEEeCCCCccccc----ccccccCCCcCCeeecccCcccCC--
Q 047954 41 AFADIPELIVINFKNN-IISGN----F-MNFSSNHKLKDIDLSGNKFYGE----ISRSLLSLKFLESLQLQNNNLTGP-- 108 (582)
Q Consensus 41 ~~~~l~~L~~l~l~~n-~~~g~----~-~~~~~~~~l~~l~l~~N~l~g~----ip~~~~~l~~l~~l~l~~N~l~g~-- 108 (582)
.+...+.|+.|+|++| .++.. + ..+..+++|+.|+|++|.++.. |...+...+.|++|+|++|.++..
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 4677899999999999 88754 2 2355678999999999999753 455666778999999999999753
Q ss_pred --CCCC--CCCCCCEEEe--ecCcccc
Q 047954 109 --VPEF--NQSSLKVFNV--SNNNLSG 129 (582)
Q Consensus 109 --ip~~--~~~~l~~l~l--s~N~l~g 129 (582)
|... ..++|+.|+| ++|.++.
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~~ 137 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLGN 137 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCCH
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCCH
Confidence 2221 4578999999 8899864
No 417
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.60 E-value=0.0002 Score=74.69 Aligned_cols=73 Identities=16% Similarity=0.223 Sum_probs=47.8
Q ss_pred cceecCCCCCCeeecCCCceEEeeccccccccCccccc-----ccccccCCCCCCCC---CCCcchhHHHHHHHHHHHHh
Q 047954 397 AVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQ-----RMISYKSPEYQSSK---KISRKSDVWSFGCLLLELLT 468 (582)
Q Consensus 397 ~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~~~~~~-----~~~~y~aPE~~~~~---~~~~k~DVwS~Gvvl~ellt 468 (582)
.++|+|+++.|||++.++ ++|.||+.+..-....... -...|.+|+..... .-....++.+....+|+.++
T Consensus 233 ~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 311 (420)
T 2pyw_A 233 ALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNLFN 311 (420)
T ss_dssp EEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHHHH
T ss_pred eEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHHHH
Confidence 499999999999999776 9999999886543221111 11346666654321 11223556688888888877
Q ss_pred CC
Q 047954 469 GR 470 (582)
Q Consensus 469 G~ 470 (582)
++
T Consensus 312 ~~ 313 (420)
T 2pyw_A 312 KR 313 (420)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 418
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=97.50 E-value=0.00017 Score=72.49 Aligned_cols=81 Identities=16% Similarity=0.204 Sum_probs=47.3
Q ss_pred CCCCcEEEccCCccccccC-CCCCCCCCCEEeCCCCcccccccccccCCCcCC-eeecccCcccCCCCCC---CCCCCCE
Q 047954 45 IPELIVINFKNNIISGNFM-NFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLE-SLQLQNNNLTGPVPEF---NQSSLKV 119 (582)
Q Consensus 45 l~~L~~l~l~~n~~~g~~~-~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~-~l~l~~N~l~g~ip~~---~~~~l~~ 119 (582)
+++|+.|+|++|+++...+ .|.++.+|+.|+|++| +.-.=+..|.+|++|+ .|+|.+ +++ .|+.. .+++|+.
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~-~I~~~aF~~c~~L~~ 301 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVT-AIEFGAFMGCDNLRY 301 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCC-EECTTTTTTCTTEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cce-EEchhhhhCCccCCE
Confidence 5666667776666653332 3566666777777666 4422233466666676 666666 443 34432 4566666
Q ss_pred EEeecCccc
Q 047954 120 FNVSNNNLS 128 (582)
Q Consensus 120 l~ls~N~l~ 128 (582)
+++++|+++
T Consensus 302 l~l~~n~i~ 310 (329)
T 3sb4_A 302 VLATGDKIT 310 (329)
T ss_dssp EEECSSCCC
T ss_pred EEeCCCccC
Confidence 666666664
No 419
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=97.40 E-value=0.00033 Score=70.25 Aligned_cols=37 Identities=14% Similarity=0.388 Sum_probs=27.5
Q ss_pred CeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccc
Q 047954 21 AHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIIS 59 (582)
Q Consensus 21 ~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~ 59 (582)
..++.|+|++ +++ .|+...|..+++|+.|+|++|.++
T Consensus 101 ~~L~~l~L~~-~i~-~I~~~aF~~~~~L~~l~l~~n~i~ 137 (329)
T 3sb4_A 101 QTLEKVILSE-KIK-NIEDAAFKGCDNLKICQIRKKTAP 137 (329)
T ss_dssp TTCCC-CBCT-TCC-EECTTTTTTCTTCCEEEBCCSSCC
T ss_pred CCCcEEECCc-ccc-chhHHHhhcCcccceEEcCCCCcc
Confidence 4677888887 665 467777888888888888888753
No 420
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.18 E-value=0.00028 Score=71.80 Aligned_cols=126 Identities=16% Similarity=0.226 Sum_probs=83.1
Q ss_pred CeEEEEEeCCCcc---------eeccCccccCCCCCCcEEEccCCccccccCCCCCCCCCCEEeCCCCccccccccccc-
Q 047954 21 AHVTGIVLEDMRL---------NGEIKSDAFADIPELIVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGEISRSLL- 90 (582)
Q Consensus 21 ~~~~~l~l~~~~l---------~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~ip~~~~- 90 (582)
+++..|.+.++.+ .+.++ ..+..+++|+.|+|++|.- -.++.+ .+.+|+.|+|..|.++...-..+.
T Consensus 139 ~~L~~L~l~~~~~e~~~is~~~~~~L~-~ll~~~P~L~~L~L~g~~~-l~l~~~-~~~~L~~L~L~~~~l~~~~l~~l~~ 215 (362)
T 2ra8_A 139 AHFEGLFWGDIDFEEQEISWIEQVDLS-PVLDAMPLLNNLKIKGTNN-LSIGKK-PRPNLKSLEIISGGLPDSVVEDILG 215 (362)
T ss_dssp TTCSEEEECCCCTTTCCGGGCBCCBCH-HHHHTCTTCCEEEEECCBT-CBCCSC-BCTTCSEEEEECSBCCHHHHHHHHH
T ss_pred chhhheeecCcchhhcccccccccCHH-HHHhcCCCCcEEEEeCCCC-ceeccc-cCCCCcEEEEecCCCChHHHHHHHH
Confidence 4677888866543 12342 3456789999999988731 134443 378999999998888766555555
Q ss_pred -CCCcCCeeeccc--CcccCC--C----C---CCCCCCCCEEEeecCcccccCCC----CCcccccccccccCCC
Q 047954 91 -SLKFLESLQLQN--NNLTGP--V----P---EFNQSSLKVFNVSNNNLSGSIPK----TQTLQLFRSYSYSNNP 149 (582)
Q Consensus 91 -~l~~l~~l~l~~--N~l~g~--i----p---~~~~~~l~~l~ls~N~l~g~ip~----~~~~~~~~~~~~~~n~ 149 (582)
++++|+.|+|+. |+..|. + + ...+++|+.|+|++|.+.+..+. ...++.+..++++.|.
T Consensus 216 ~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~ 290 (362)
T 2ra8_A 216 SDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGV 290 (362)
T ss_dssp SBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSC
T ss_pred ccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCC
Confidence 789999999864 332222 1 1 12468999999999998754321 1235667777776653
No 421
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.12 E-value=0.0017 Score=64.14 Aligned_cols=70 Identities=7% Similarity=0.085 Sum_probs=41.5
Q ss_pred ccccccCceEEEEEEEcCCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCc-cccceEEEeCCeeEEEEEeC-CCCCh
Q 047954 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNL-LPLLAYYFSNDEKLLVYKFA-GNGNL 351 (582)
Q Consensus 274 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~e~~-~~gsL 351 (582)
+.|+.|....+|+. ..+++|+........ ....+|+.+++.+....+ .+++++ +.+.-++|+||+ ++.++
T Consensus 24 ~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~-~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 24 LERLGGLTNLVFRA-----GDLCLRIPGKGTEEY-INRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQTM 95 (301)
T ss_dssp EEEESCSSEEEEEE-----TTEEEEEECC----C-CCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEEC
T ss_pred eEcCCcccccccee-----eeEEEECCCCCccce-eCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCccC
Confidence 45888999999998 558888875432111 112457766665532223 344443 444467899999 55444
No 422
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.12 E-value=0.0053 Score=61.19 Aligned_cols=148 Identities=14% Similarity=0.103 Sum_probs=80.3
Q ss_pred cccccCceEEEEEEEcCCceEEEEEecCCCcchHHHHHHHHHHHhcCCC--CCccccceE-----EEeCCeeEEEEEeCC
Q 047954 275 GLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKH--PNLLPLLAY-----YFSNDEKLLVYKFAG 347 (582)
Q Consensus 275 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H--~niv~l~~~-----~~~~~~~~lv~e~~~ 347 (582)
.++ |....||+....++..+++|...... ...+.+..|..++..+.. -.+.+++.. ....+..++||+|++
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~ 110 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG 110 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecC
Confidence 355 77789999887777779999986322 234566677777766632 123444442 223456688999998
Q ss_pred CCChH-----H---------HHhcC---CCCCCCCccchHHH----HH---------------HHHHHHHHHHHHhccCC
Q 047954 348 NGNLF-----N---------RIHGG---KSSKNRIPFRCRSR----LL---------------VARGVARALEYLHHKDK 391 (582)
Q Consensus 348 ~gsL~-----~---------~l~~~---~~~~~~~~l~~~~~----~~---------------i~~~ia~gL~yLH~~~~ 391 (582)
|..+. . .+|.. ........+++... .. +...+...++.+...-.
T Consensus 111 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (328)
T 1zyl_A 111 GRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWR 190 (328)
T ss_dssp CEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 75431 1 12211 00000111221110 00 11111122333332110
Q ss_pred CCCCCcceecCCCCCCeeecCCCceEEeecccccc
Q 047954 392 SRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSL 426 (582)
Q Consensus 392 ~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~ 426 (582)
......++|+|+++.|||++ + .+.|+||+.+..
T Consensus 191 ~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 191 EDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 00124589999999999999 4 899999987643
No 423
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.05 E-value=0.0017 Score=67.73 Aligned_cols=72 Identities=8% Similarity=0.068 Sum_probs=47.5
Q ss_pred ccccccCceEEEEEEEcC--------CceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCc-cccceEEEeCCeeEEEEE
Q 047954 274 EGLGKGIFGNSYKALLEG--------RAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNL-LPLLAYYFSNDEKLLVYK 344 (582)
Q Consensus 274 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~e 344 (582)
+.|+.|....||++...+ +..+++|+.... ...+.+..|..++..+...++ .++++.+. + .+|+|
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~e 152 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLEE 152 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEEC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEEE
Confidence 457788889999998753 467888887432 122456678888887743333 56666542 2 38999
Q ss_pred eCCCCCh
Q 047954 345 FAGNGNL 351 (582)
Q Consensus 345 ~~~~gsL 351 (582)
|+++.+|
T Consensus 153 ~l~G~~l 159 (429)
T 1nw1_A 153 YIPSRPL 159 (429)
T ss_dssp CCCEEEC
T ss_pred EeCCccc
Confidence 9986443
No 424
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.99 E-value=0.005 Score=61.60 Aligned_cols=31 Identities=23% Similarity=0.295 Sum_probs=26.5
Q ss_pred CcceecCCCCCCeeecCC----CceEEeecccccc
Q 047954 396 SAVIHGNLKSTNILLDDN----EMVLVSDYGFSSL 426 (582)
Q Consensus 396 ~~ivH~Dlkp~NILl~~~----~~~kl~DfG~a~~ 426 (582)
..++|+|+.+.|||++.+ ..+.|.||+.+..
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 469999999999999875 6789999997754
No 425
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.97 E-value=0.015 Score=57.61 Aligned_cols=149 Identities=13% Similarity=0.128 Sum_probs=79.3
Q ss_pred ccccccCceEEEEEEEcCCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCC--ccccce------EEEeCCeeEEEEEe
Q 047954 274 EGLGKGIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPN--LLPLLA------YYFSNDEKLLVYKF 345 (582)
Q Consensus 274 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l~~------~~~~~~~~~lv~e~ 345 (582)
+.|+.|....+|+....++ .+++|...... ..+.+..|+.++..+.... +.+++. +....+..+++++|
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~ 104 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISF 104 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEEC
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEe
Confidence 3477788899999987766 58888876521 1234455666665552111 233332 12234567899999
Q ss_pred CCCCChHH--------------HHhcCCCC--CCC----CccchHHHHH------------HHHHHHHHHHHHhccCCCC
Q 047954 346 AGNGNLFN--------------RIHGGKSS--KNR----IPFRCRSRLL------------VARGVARALEYLHHKDKSR 393 (582)
Q Consensus 346 ~~~gsL~~--------------~l~~~~~~--~~~----~~l~~~~~~~------------i~~~ia~gL~yLH~~~~~~ 393 (582)
++|..+.. .+|..... ... ....|..... +...+...+++++...+..
T Consensus 105 l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~ 184 (322)
T 2ppq_A 105 LEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKD 184 (322)
T ss_dssp CCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCS
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCccc
Confidence 98865311 12221100 000 0012222110 1112445566665432111
Q ss_pred CCCcceecCCCCCCeeecCCCceEEeeccccc
Q 047954 394 TQSAVIHGNLKSTNILLDDNEMVLVSDYGFSS 425 (582)
Q Consensus 394 ~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~ 425 (582)
....++|+|+.+.|||++++..+.|+||+.+.
T Consensus 185 ~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 185 LPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp SCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 23468999999999999987656899998653
No 426
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.82 E-value=0.0046 Score=64.86 Aligned_cols=73 Identities=11% Similarity=0.077 Sum_probs=45.4
Q ss_pred ccccccCceEEEEEEEcC-CceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCc-cccceEEEeCCeeEEEEEeCCCCCh
Q 047954 274 EGLGKGIFGNSYKALLEG-RAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNL-LPLLAYYFSNDEKLLVYKFAGNGNL 351 (582)
Q Consensus 274 ~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~e~~~~gsL 351 (582)
+.|+.|-...+|++...+ +..+++|+......... .-..|..++..+...++ .++++++ .+ .+||||+++.+|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~i-dR~~E~~vl~~L~~~gl~P~ll~~~--~~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEII-NREREKKISCILYNKNIAKKIYVFF--TN--GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCS-CHHHHHHHHHHHTTSSSBCCEEEEE--TT--EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhc-CHHHHHHHHHHHHhcCCCCCEEEEe--CC--eEEEEeeCCccC
Confidence 457888889999998765 46788887643221111 12478888887754444 4666665 22 359999987443
No 427
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.72 E-value=0.0061 Score=62.20 Aligned_cols=144 Identities=13% Similarity=0.152 Sum_probs=79.5
Q ss_pred ccccccCceEEEEEEEcC--------CceEEEEEecCCCcchHHHHHHHHHHHhcCC-CCCccccceEEEeCCeeEEEEE
Q 047954 274 EGLGKGIFGNSYKALLEG--------RAPVVVKRLRDLKPLITEEFRKQLLVIADQK-HPNLLPLLAYYFSNDEKLLVYK 344 (582)
Q Consensus 274 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e 344 (582)
+.|..|-...+|++...+ +..+++|+.... ........+|.++++.+. +.-..++++++.+ .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 456677788899988642 467888886332 123456678988887763 2223556665532 39999
Q ss_pred eCCCCChHH-----------------HHhcCCCCCCCCcc-chHHHHHHHHHHH-------------------HHHHHHh
Q 047954 345 FAGNGNLFN-----------------RIHGGKSSKNRIPF-RCRSRLLVARGVA-------------------RALEYLH 387 (582)
Q Consensus 345 ~~~~gsL~~-----------------~l~~~~~~~~~~~l-~~~~~~~i~~~ia-------------------~gL~yLH 387 (582)
|++|..|.. .+|.........+. -|.+..++..++. ..+.+|.
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 999855431 12221111011111 2344444443331 1233332
Q ss_pred ----ccCCCCCCCcceecCCCCCCeeecCC----CceEEeeccccc
Q 047954 388 ----HKDKSRTQSAVIHGNLKSTNILLDDN----EMVLVSDYGFSS 425 (582)
Q Consensus 388 ----~~~~~~~~~~ivH~Dlkp~NILl~~~----~~~kl~DfG~a~ 425 (582)
... ....++|+|+.+.|||++.+ +.+.++||..+.
T Consensus 211 ~~L~~~~---~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 211 KLLESTP---SPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHTSC---CCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHhhcC---CCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 222 23468999999999999876 689999998764
No 428
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.45 E-value=0.0035 Score=63.84 Aligned_cols=73 Identities=12% Similarity=0.064 Sum_probs=41.5
Q ss_pred ccccccCceEEEEEEEcC---------CceEEEEEecCCCcchHHHHHHHHHHHhcCCCCC-ccccceEEEeCCeeEEEE
Q 047954 274 EGLGKGIFGNSYKALLEG---------RAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPN-LLPLLAYYFSNDEKLLVY 343 (582)
Q Consensus 274 ~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~n-iv~l~~~~~~~~~~~lv~ 343 (582)
..|+.|....+|+....+ +..+++|+....... ......|..++..+.... +.++++.. . -++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEE
Confidence 357788888999988654 256888876542211 112356777777663333 34566543 2 36899
Q ss_pred EeCCCCCh
Q 047954 344 KFAGNGNL 351 (582)
Q Consensus 344 e~~~~gsL 351 (582)
||+++..+
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99987543
No 429
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.45 E-value=0.0044 Score=52.88 Aligned_cols=35 Identities=23% Similarity=0.227 Sum_probs=17.9
Q ss_pred CCEEeCCCCcccccccccccCCCcCCeeecccCcc
Q 047954 71 LKDIDLSGNKFYGEISRSLLSLKFLESLQLQNNNL 105 (582)
Q Consensus 71 l~~l~l~~N~l~g~ip~~~~~l~~l~~l~l~~N~l 105 (582)
|+.|+|++|+|+..-+..|..+++|+.|+|++|.+
T Consensus 33 l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 33 TTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp CSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 55555555555533333345555555555555544
No 430
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.27 E-value=0.018 Score=57.83 Aligned_cols=31 Identities=19% Similarity=0.446 Sum_probs=27.1
Q ss_pred CcceecCCCCCCeeecCCCceEEeecccccc
Q 047954 396 SAVIHGNLKSTNILLDDNEMVLVSDYGFSSL 426 (582)
Q Consensus 396 ~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~ 426 (582)
..++|+|+.+.||++++++.+.|.||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4699999999999999888899999987654
No 431
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.17 E-value=0.044 Score=50.55 Aligned_cols=102 Identities=10% Similarity=0.020 Sum_probs=65.9
Q ss_pred ChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCcceecCCCCCCeeecCCCceEEeeccccccccC
Q 047954 350 NLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIHGNLKSTNILLDDNEMVLVSDYGFSSLVAQ 429 (582)
Q Consensus 350 sL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a~~~~~ 429 (582)
+|.+.|.... .++++.+++.++.|.+.+|.-+-.... -..+=+.|..|++..+|.+...+ ..+.
T Consensus 34 SL~eIL~~~~-----~PlsEEqaWALc~Qc~~~L~~~~~~~~------~~~~i~~~~~i~l~~dG~V~f~~-~~s~---- 97 (229)
T 2yle_A 34 SLEEILRLYN-----QPINEEQAWAVCYQCCGSLRAAARRRQ------PRHRVRSAAQIRVWRDGAVTLAP-AADD---- 97 (229)
T ss_dssp EHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHHTTC------CCCCCCSGGGEEEETTSCEEECC-C-------
T ss_pred cHHHHHHHcC-----CCcCHHHHHHHHHHHHHHHHhhhhccc------CCceecCCcceEEecCCceeccc-cccc----
Confidence 7888887554 379999999999999999877622110 01223346889999999988764 2111
Q ss_pred cccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCC
Q 047954 430 PIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRIS 472 (582)
Q Consensus 430 ~~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P 472 (582)
.....+.|||... ...+.+.=|||+|+++|..+--..|
T Consensus 98 ----~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 ----AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp -------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ----ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1223467898764 3557888999999999999874433
No 432
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.87 E-value=0.0024 Score=58.54 Aligned_cols=84 Identities=17% Similarity=0.207 Sum_probs=56.9
Q ss_pred cCCCCCCcEEEccCC-ccccc----c-CCCCCCCCCCEEeCCCCccccc----ccccccCCCcCCeeecccCcccCCCCC
Q 047954 42 FADIPELIVINFKNN-IISGN----F-MNFSSNHKLKDIDLSGNKFYGE----ISRSLLSLKFLESLQLQNNNLTGPVPE 111 (582)
Q Consensus 42 ~~~l~~L~~l~l~~n-~~~g~----~-~~~~~~~~l~~l~l~~N~l~g~----ip~~~~~l~~l~~l~l~~N~l~g~ip~ 111 (582)
+.+-+.|+.|+|++| .+... + ..+..++.|+.|+|++|++... |-..+..-+.|+.|+|++|.++..==.
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 456678899999885 66532 1 2345678899999999998743 333444557899999999998742110
Q ss_pred ------CCCCCCCEEEeecC
Q 047954 112 ------FNQSSLKVFNVSNN 125 (582)
Q Consensus 112 ------~~~~~l~~l~ls~N 125 (582)
..-+.|+.|+|++|
T Consensus 117 ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHhhCCceeEEECCCC
Confidence 12356899999865
No 433
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=95.79 E-value=0.0031 Score=56.63 Aligned_cols=81 Identities=15% Similarity=0.137 Sum_probs=48.8
Q ss_pred CCCcEEEccCCccccc-cCCCCCCCCCCEEeCCCCc-ccccccccccCC----CcCCeeecccCc-ccC--CCCCCCCCC
Q 047954 46 PELIVINFKNNIISGN-FMNFSSNHKLKDIDLSGNK-FYGEISRSLLSL----KFLESLQLQNNN-LTG--PVPEFNQSS 116 (582)
Q Consensus 46 ~~L~~l~l~~n~~~g~-~~~~~~~~~l~~l~l~~N~-l~g~ip~~~~~l----~~l~~l~l~~N~-l~g--~ip~~~~~~ 116 (582)
-.|+.|||+++.++.. +..+.++++|+.|+|+++. ++..-=..++.+ ++|++|+|+++. +|. -..-..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 3577777777776543 3445677777777777774 554433445543 367777777764 542 111124677
Q ss_pred CCEEEeecCc
Q 047954 117 LKVFNVSNNN 126 (582)
Q Consensus 117 l~~l~ls~N~ 126 (582)
|+.|+|++..
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 7777777653
No 434
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=95.61 E-value=0.0049 Score=55.34 Aligned_cols=85 Identities=12% Similarity=0.064 Sum_probs=62.8
Q ss_pred CeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCc-cccc-cCCCCCC----CCCCEEeCCCCc-ccccccccccCCC
Q 047954 21 AHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNI-ISGN-FMNFSSN----HKLKDIDLSGNK-FYGEISRSLLSLK 93 (582)
Q Consensus 21 ~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~-~~g~-~~~~~~~----~~l~~l~l~~N~-l~g~ip~~~~~l~ 93 (582)
-.++.|+|+++.++-.= -..+..+++|+.|+|+++. ++.. +..+..+ ++|+.|+|+++. +|..==..+.+++
T Consensus 61 ~~L~~LDLs~~~Itd~G-L~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~ 139 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIG-FDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFR 139 (176)
T ss_dssp CCEEEEEEESCCCCGGG-GGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCT
T ss_pred ceEeEEeCcCCCccHHH-HHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCC
Confidence 46999999999876321 1246789999999999985 6653 2234432 479999999974 7754334678899
Q ss_pred cCCeeecccCc-cc
Q 047954 94 FLESLQLQNNN-LT 106 (582)
Q Consensus 94 ~l~~l~l~~N~-l~ 106 (582)
+|+.|+|+++. +|
T Consensus 140 ~L~~L~L~~c~~It 153 (176)
T 3e4g_A 140 NLKYLFLSDLPGVK 153 (176)
T ss_dssp TCCEEEEESCTTCC
T ss_pred CCCEEECCCCCCCC
Confidence 99999999885 44
No 435
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=95.50 E-value=0.017 Score=49.09 Aligned_cols=52 Identities=19% Similarity=0.211 Sum_probs=28.4
Q ss_pred EEeCCCCccc-ccccccccCCCcCCeeecccCcccCCCCCC---CCCCCCEEEeecCcc
Q 047954 73 DIDLSGNKFY-GEISRSLLSLKFLESLQLQNNNLTGPVPEF---NQSSLKVFNVSNNNL 127 (582)
Q Consensus 73 ~l~l~~N~l~-g~ip~~~~~l~~l~~l~l~~N~l~g~ip~~---~~~~l~~l~ls~N~l 127 (582)
.++.++++|+ -.||..+. ++|+.|+|++|+|+. ||.. .+++|+.|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~-l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTA-LPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSS-CCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCc-cChhhhhhccccCEEEecCCCe
Confidence 5666666665 45554432 246666666666663 4432 344555555555544
No 436
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=95.39 E-value=0.034 Score=57.16 Aligned_cols=120 Identities=12% Similarity=0.208 Sum_probs=75.7
Q ss_pred CCeEEEEEeCCCcceeccCccccCCCCCCcEEEccCCcccccc-CCCCCCCCCCEEeCCCCccc----cccc-ccccCCC
Q 047954 20 SAHVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNF-MNFSSNHKLKDIDLSGNKFY----GEIS-RSLLSLK 93 (582)
Q Consensus 20 ~~~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~-~~~~~~~~l~~l~l~~N~l~----g~ip-~~~~~l~ 93 (582)
...++.|.|.++ ++ .|+...+.+ .+|+.+.|.+ +++-.- -.|.++.+|+.|+|.+|.+. ..|+ ..|.+|+
T Consensus 225 ~~~L~~l~l~~~-l~-~I~~~aF~~-~~L~~i~lp~-~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~ 300 (401)
T 4fdw_A 225 TSQLKTIEIPEN-VS-TIGQEAFRE-SGITTVKLPN-GVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCP 300 (401)
T ss_dssp CTTCCCEECCTT-CC-EECTTTTTT-CCCSEEEEET-TCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCT
T ss_pred CCCCCEEecCCC-cc-Ccccccccc-CCccEEEeCC-CccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCc
Confidence 346777777764 32 455556666 7888888843 343222 24778888888888888775 1243 4577888
Q ss_pred cCCeeecccCcccCCCCCC---CCCCCCEEEeecCcccccCCCC--CcccccccccccCC
Q 047954 94 FLESLQLQNNNLTGPVPEF---NQSSLKVFNVSNNNLSGSIPKT--QTLQLFRSYSYSNN 148 (582)
Q Consensus 94 ~l~~l~l~~N~l~g~ip~~---~~~~l~~l~ls~N~l~g~ip~~--~~~~~~~~~~~~~n 148 (582)
+|+.++|.+ +++ .|+.. .+++|+.++|.+| ++ .|+.. ..+ .+..+.+.+|
T Consensus 301 ~L~~l~l~~-~i~-~I~~~aF~~c~~L~~l~lp~~-l~-~I~~~aF~~~-~L~~l~l~~n 355 (401)
T 4fdw_A 301 KLARFEIPE-SIR-ILGQGLLGGNRKVTQLTIPAN-VT-QINFSAFNNT-GIKEVKVEGT 355 (401)
T ss_dssp TCCEECCCT-TCC-EECTTTTTTCCSCCEEEECTT-CC-EECTTSSSSS-CCCEEEECCS
T ss_pred cCCeEEeCC-ceE-EEhhhhhcCCCCccEEEECcc-cc-EEcHHhCCCC-CCCEEEEcCC
Confidence 888888884 454 55553 5678888888655 32 23322 223 5666666666
No 437
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.29 E-value=0.069 Score=54.67 Aligned_cols=30 Identities=27% Similarity=0.491 Sum_probs=25.8
Q ss_pred CcceecCCCCCCeeecCC------CceEEeeccccc
Q 047954 396 SAVIHGNLKSTNILLDDN------EMVLVSDYGFSS 425 (582)
Q Consensus 396 ~~ivH~Dlkp~NILl~~~------~~~kl~DfG~a~ 425 (582)
..++|+|+.+.|||++.+ +.+.++||..+.
T Consensus 244 ~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 244 VVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred eeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 468999999999999876 789999997653
No 438
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=94.89 E-value=0.2 Score=51.42 Aligned_cols=66 Identities=15% Similarity=0.129 Sum_probs=30.1
Q ss_pred cCccccCCCCCCcEEEccCCccccccCCCCCCCCCCEEeCCCCcccccccccccCCCcCCeeecccC
Q 047954 37 IKSDAFADIPELIVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQLQNN 103 (582)
Q Consensus 37 ip~~~~~~l~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~l~~N 103 (582)
|+...+..+++|+.++|++|.++-.......+.+|+.+.|..| +.-.=...|.+|++|+.|+|.+|
T Consensus 171 I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~ 236 (401)
T 4fdw_A 171 LKEDIFYYCYNLKKADLSKTKITKLPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN 236 (401)
T ss_dssp ECSSTTTTCTTCCEEECTTSCCSEECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT
T ss_pred ehHHHhhCcccCCeeecCCCcceEechhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC
Confidence 3333455555555555555554433322222345555555432 33112233455555555555543
No 439
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=94.80 E-value=0.0098 Score=54.39 Aligned_cols=38 Identities=13% Similarity=0.183 Sum_probs=16.7
Q ss_pred CCCCcEEEccCCcccccc----C-CCCCCCCCCEEeCCCCccc
Q 047954 45 IPELIVINFKNNIISGNF----M-NFSSNHKLKDIDLSGNKFY 82 (582)
Q Consensus 45 l~~L~~l~l~~n~~~g~~----~-~~~~~~~l~~l~l~~N~l~ 82 (582)
-+.|+.|+|++|.++..- . .+..++.|+.|+|+.|+++
T Consensus 69 N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 69 SKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp CSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred CCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 344555555555544221 0 1223344555555555554
No 440
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.71 E-value=0.039 Score=57.03 Aligned_cols=73 Identities=8% Similarity=0.043 Sum_probs=44.5
Q ss_pred ccccccCceEEEEEEEcC--------CceEEEEEecCCCcchHHHHHHHHHHHhcCC-CCCccccceEEEeCCeeEEEEE
Q 047954 274 EGLGKGIFGNSYKALLEG--------RAPVVVKRLRDLKPLITEEFRKQLLVIADQK-HPNLLPLLAYYFSNDEKLLVYK 344 (582)
Q Consensus 274 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e 344 (582)
+.+..|-...+|+....+ +..+++++........ -.-.+|..+++.+. +.-..++++.+ . -++|||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~-idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~e 150 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKF-YDSKVELDVFRYLSNINIAPNIIADF--P--EGRIEE 150 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CC-CCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchh-cCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEEE
Confidence 456677788899988763 4678888864432111 12346777776663 22234555533 2 378999
Q ss_pred eCCCCCh
Q 047954 345 FAGNGNL 351 (582)
Q Consensus 345 ~~~~gsL 351 (582)
|++|..|
T Consensus 151 fI~G~~l 157 (424)
T 3mes_A 151 FIDGEPL 157 (424)
T ss_dssp CCCSEEC
T ss_pred EeCCccC
Confidence 9998654
No 441
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.57 E-value=0.65 Score=47.45 Aligned_cols=29 Identities=28% Similarity=0.575 Sum_probs=24.0
Q ss_pred cceecCCCCCCeee------cCCCceEEeeccccc
Q 047954 397 AVIHGNLKSTNILL------DDNEMVLVSDYGFSS 425 (582)
Q Consensus 397 ~ivH~Dlkp~NILl------~~~~~~kl~DfG~a~ 425 (582)
.++|+|+.+.|||+ +++..+.++||-.|.
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 35799999999999 456679999998764
No 442
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=90.64 E-value=0.9 Score=41.74 Aligned_cols=117 Identities=15% Similarity=0.197 Sum_probs=79.6
Q ss_pred CCCCCccccceEEEeCCeeEEEEEeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHHHHhccCCCCCCCccee
Q 047954 321 QKHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALEYLHHKDKSRTQSAVIH 400 (582)
Q Consensus 321 l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~~~~~ivH 400 (582)
..||+.+.. .+-.+.+...+.|+.-+.+-=+..++ .++...+++++..|+....++++ -+|
T Consensus 42 ~~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik---------~~~~~eKlr~l~ni~~l~~~~~~---------r~t 102 (215)
T 4ann_A 42 QHSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIK---------SFTKNEKLRYLLNIKNLEEVNRT---------RYT 102 (215)
T ss_dssp SCCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGG---------GSCHHHHHHHHHHGGGGGGGGGS---------SEE
T ss_pred ccCCcccce-EEEEcccEEEEEEEcCcccCCHHHHH---------hcCHHHHHHHHHHHHHHHHHhcC---------ceE
Confidence 378888876 56666666666666544322222232 36778899999999888866654 368
Q ss_pred cCCCCCCeeecCCCceEEeeccccccccCcccccccccccCCCCCCCCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 047954 401 GNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYKSPEYQSSKKISRKSDVWSFGCLLLELLTGRISTH 474 (582)
Q Consensus 401 ~Dlkp~NILl~~~~~~kl~DfG~a~~~~~~~~~~~~~~y~aPE~~~~~~~~~k~DVwS~Gvvl~elltG~~P~~ 474 (582)
--|.|+||+++.++.+++.-.|+-..+ +|. ..+...=.-.+=+++..+++++..|+
T Consensus 103 f~L~P~NL~f~~~~~p~i~~RGik~~l-------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 103 FVLAPDELFFTRDGLPIAKTRGLQNVV-------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp CCCSGGGEEECTTSCEEESCCEETTTB-------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEEecceEEEcCCCCEEEEEccCccCC-------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 889999999999999999877764322 222 22222224467888999999998885
No 443
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=89.60 E-value=1.3 Score=44.96 Aligned_cols=79 Identities=18% Similarity=0.284 Sum_probs=36.5
Q ss_pred ccCCCCCCcEEEccCCccccccCCCCCCCCCCEEeCCCCccccccc-ccccCCCcCCeeecccCcccCCCCCC---CCCC
Q 047954 41 AFADIPELIVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGEIS-RSLLSLKFLESLQLQNNNLTGPVPEF---NQSS 116 (582)
Q Consensus 41 ~~~~l~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~ip-~~~~~l~~l~~l~l~~N~l~g~ip~~---~~~~ 116 (582)
.+..++.|+.+.+.++..+=.--.|.++.+|+.+.+. +.++ .|+ ..|.+|++|+.++|..| ++ .|... .+++
T Consensus 260 aF~~c~~L~~i~lp~~~~~I~~~aF~~c~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~~ 335 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVVSIGTGAFMNCPALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGCEQ 335 (394)
T ss_dssp TTTTCSSCCEEECCTTCCEECTTTTTTCTTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTT
T ss_pred eeeecccccEEecccccceecCcccccccccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCCCC
Confidence 3455566666666544332111234455556655554 2232 233 23455555666555533 22 23331 3455
Q ss_pred CCEEEee
Q 047954 117 LKVFNVS 123 (582)
Q Consensus 117 l~~l~ls 123 (582)
|+.+.|.
T Consensus 336 L~~i~ip 342 (394)
T 4gt6_A 336 LERIAIP 342 (394)
T ss_dssp CCEEEEC
T ss_pred CCEEEEC
Confidence 5555554
No 444
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=88.63 E-value=0.93 Score=45.63 Aligned_cols=96 Identities=11% Similarity=0.187 Sum_probs=50.8
Q ss_pred eEEEEEeCCCcceeccCccccCCCCCCcEEEccCCcccccc--CCCCCCCCCCEEeCCCCccccccc-ccccCCCcCCee
Q 047954 22 HVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNF--MNFSSNHKLKDIDLSGNKFYGEIS-RSLLSLKFLESL 98 (582)
Q Consensus 22 ~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~--~~~~~~~~l~~l~l~~N~l~g~ip-~~~~~l~~l~~l 98 (582)
.+..+.+..+ +. .|+...+..++.|+.+.+..+ ++ .| -.+.++.+|+.+.+..+ +. .|+ ..+.+|++|+.+
T Consensus 218 ~l~~i~~~~~-~~-~i~~~~f~~~~~L~~i~lp~~-v~-~I~~~aF~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i 291 (379)
T 4h09_A 218 NLKKITITSG-VT-TLGDGAFYGMKALDEIAIPKN-VT-SIGSFLLQNCTALKTLNFYAK-VK-TVPYLLCSGCSNLTKV 291 (379)
T ss_dssp SCSEEECCTT-CC-EECTTTTTTCSSCCEEEECTT-CC-EECTTTTTTCTTCCEEEECCC-CS-EECTTTTTTCTTCCEE
T ss_pred ccceeeeccc-ee-EEccccccCCccceEEEcCCC-cc-EeCccccceeehhcccccccc-ce-eccccccccccccccc
Confidence 3444554433 11 233344556677777776554 22 12 13455666777666543 32 233 345666777777
Q ss_pred ecccCcccCCCCCC---CCCCCCEEEeec
Q 047954 99 QLQNNNLTGPVPEF---NQSSLKVFNVSN 124 (582)
Q Consensus 99 ~l~~N~l~g~ip~~---~~~~l~~l~ls~ 124 (582)
.|.+|.++ .|+.. ++.+|+.++|..
T Consensus 292 ~l~~~~i~-~I~~~aF~~c~~L~~i~lp~ 319 (379)
T 4h09_A 292 VMDNSAIE-TLEPRVFMDCVKLSSVTLPT 319 (379)
T ss_dssp EECCTTCC-EECTTTTTTCTTCCEEECCT
T ss_pred cccccccc-eehhhhhcCCCCCCEEEcCc
Confidence 77666655 34442 456677666643
No 445
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=86.19 E-value=1.9 Score=39.68 Aligned_cols=114 Identities=15% Similarity=0.100 Sum_probs=78.1
Q ss_pred CCCCccccceEEEeCCeeEEEEEeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHHHHHHH-HHhccCCCCCCCccee
Q 047954 322 KHPNLLPLLAYYFSNDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGVARALE-YLHHKDKSRTQSAVIH 400 (582)
Q Consensus 322 ~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ia~gL~-yLH~~~~~~~~~~ivH 400 (582)
.||+. -..+-.+++...+.|+.-+++.=+..++ .++...+++++..|+.... ++++ -+|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~---------~~~~~eKlrll~nl~~L~~~~~~~---------r~t 107 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR---------KTTLLSRIRAAIHLVSKVKHHSAR---------RLI 107 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH---------TSCHHHHHHHHHHHHHHHSSCCSS---------SEE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH---------hcCHHHHHHHHHHHHHHHHHhhhC---------cee
Confidence 67777 3444466777777777664544444443 3677889999988887776 5554 467
Q ss_pred cCCCCCCeeecCCCceEEeeccccccccCcccccccccccCCCCCCCCCCCcchh-HHHHHHHHHHHHhCCCCCC
Q 047954 401 GNLKSTNILLDDNEMVLVSDYGFSSLVAQPIAAQRMISYKSPEYQSSKKISRKSD-VWSFGCLLLELLTGRISTH 474 (582)
Q Consensus 401 ~Dlkp~NILl~~~~~~kl~DfG~a~~~~~~~~~~~~~~y~aPE~~~~~~~~~k~D-VwS~Gvvl~elltG~~P~~ 474 (582)
--|.|+||++|.++.+++.-.|+-.. ++|.- .+ ..| .-.+=+++..++.++..|+
T Consensus 108 f~l~P~NL~f~~~~~p~i~hRGi~~~-------------lpP~e-----~~-ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 108 FIVCPENLMFNRALEPFFLHVGVKES-------------LPPDE-----WD-DERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp CCCCGGGEEECTTCCEEESCCEETTT-------------BSSCS-----CC-HHHHHHHHHHHHHHHTTCSSCHH
T ss_pred EEEeCceEEEeCCCcEEEEEcCCccc-------------CCCCC-----CC-HHHHHHHHHHHHHHHHcCCCCHH
Confidence 78899999999999999987776432 33332 12 223 3367788888888887774
No 446
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=85.02 E-value=2.1 Score=43.39 Aligned_cols=74 Identities=19% Similarity=0.272 Sum_probs=31.1
Q ss_pred eEEEEEeCCCcceeccCccccCCCCCCcEEEccCCccccccCCCCCCCCCCEEeCCCCccccccc-ccccCCCcCCeeec
Q 047954 22 HVTGIVLEDMRLNGEIKSDAFADIPELIVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGEIS-RSLLSLKFLESLQL 100 (582)
Q Consensus 22 ~~~~l~l~~~~l~g~ip~~~~~~l~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~ip-~~~~~l~~l~~l~l 100 (582)
.+..+.+..+..+ |....+..++.|..+.+..+.+.. ..+..+.+|+.+.+..| +. .|+ ..+.+|++|+.++|
T Consensus 254 ~l~~~~~~~~~~~--i~~~~F~~~~~l~~~~~~~~~i~~--~~F~~~~~L~~i~l~~~-i~-~I~~~aF~~c~~L~~i~l 327 (394)
T 4fs7_A 254 DLESISIQNNKLR--IGGSLFYNCSGLKKVIYGSVIVPE--KTFYGCSSLTEVKLLDS-VK-FIGEEAFESCTSLVSIDL 327 (394)
T ss_dssp SCCEEEECCTTCE--ECSCTTTTCTTCCEEEECSSEECT--TTTTTCTTCCEEEECTT-CC-EECTTTTTTCTTCCEECC
T ss_pred cceeEEcCCCcce--eeccccccccccceeccCceeecc--ccccccccccccccccc-cc-eechhhhcCCCCCCEEEe
Confidence 3444444443322 333334555555555554432110 12344445555555433 22 222 23444555555555
Q ss_pred c
Q 047954 101 Q 101 (582)
Q Consensus 101 ~ 101 (582)
.
T Consensus 328 p 328 (394)
T 4fs7_A 328 P 328 (394)
T ss_dssp C
T ss_pred C
Confidence 4
No 447
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=80.62 E-value=6.3 Score=39.67 Aligned_cols=79 Identities=27% Similarity=0.422 Sum_probs=36.4
Q ss_pred ccCCCCCCcEEEccCCccccccC--CCCCCCCCCEEeCCCCccccccc-ccccCCCcCCeeecccCcccCCCCCC---CC
Q 047954 41 AFADIPELIVINFKNNIISGNFM--NFSSNHKLKDIDLSGNKFYGEIS-RSLLSLKFLESLQLQNNNLTGPVPEF---NQ 114 (582)
Q Consensus 41 ~~~~l~~L~~l~l~~n~~~g~~~--~~~~~~~l~~l~l~~N~l~g~ip-~~~~~l~~l~~l~l~~N~l~g~ip~~---~~ 114 (582)
.+.+++.|+.+.+.++ ++ .|+ .|.++.+|+.++|..| ++ .|. ..|.+|++|+.+.|..| ++ .|+.. ++
T Consensus 283 aF~~c~~L~~i~l~~~-i~-~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C 356 (394)
T 4gt6_A 283 AFMNCPALQDIEFSSR-IT-ELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGCEQLERIAIPSS-VT-KIPESAFSNC 356 (394)
T ss_dssp TTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTTC
T ss_pred ccccccccccccCCCc-cc-ccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhCC
Confidence 3445555555555322 21 122 2455555555555533 22 222 23455555555555433 32 34331 44
Q ss_pred CCCCEEEeecC
Q 047954 115 SSLKVFNVSNN 125 (582)
Q Consensus 115 ~~l~~l~ls~N 125 (582)
++|+.+++++|
T Consensus 357 ~~L~~i~~~~~ 367 (394)
T 4gt6_A 357 TALNNIEYSGS 367 (394)
T ss_dssp TTCCEEEESSC
T ss_pred CCCCEEEECCc
Confidence 55555555544
No 448
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=80.01 E-value=2.6 Score=42.58 Aligned_cols=83 Identities=19% Similarity=0.224 Sum_probs=62.6
Q ss_pred cCccccCCCCCCcEEEccCCccccccC--CCCCCCCCCEEeCCCCccccccc-ccccCCCcCCeeecccCcccCCCCCC-
Q 047954 37 IKSDAFADIPELIVINFKNNIISGNFM--NFSSNHKLKDIDLSGNKFYGEIS-RSLLSLKFLESLQLQNNNLTGPVPEF- 112 (582)
Q Consensus 37 ip~~~~~~l~~L~~l~l~~n~~~g~~~--~~~~~~~l~~l~l~~N~l~g~ip-~~~~~l~~l~~l~l~~N~l~g~ip~~- 112 (582)
|+...+..+++|+.+.+.+| ++ .|+ .|.++.+|+.++|..+ ++ .|+ ..|.+|++|+.++|..| ++ .|+..
T Consensus 288 i~~~~F~~~~~L~~i~l~~~-i~-~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~a 361 (394)
T 4fs7_A 288 VPEKTFYGCSSLTEVKLLDS-VK-FIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS-LR-KIGANA 361 (394)
T ss_dssp ECTTTTTTCTTCCEEEECTT-CC-EECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT-CC-EECTTT
T ss_pred eccccccccccccccccccc-cc-eechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc-cc-EehHHH
Confidence 55556778999999999765 32 333 4788899999999755 54 454 56889999999999877 54 56653
Q ss_pred --CCCCCCEEEeecC
Q 047954 113 --NQSSLKVFNVSNN 125 (582)
Q Consensus 113 --~~~~l~~l~ls~N 125 (582)
.+++|+.+++..|
T Consensus 362 F~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 362 FQGCINLKKVELPKR 376 (394)
T ss_dssp BTTCTTCCEEEEEGG
T ss_pred hhCCCCCCEEEECCC
Confidence 6789999998755
No 449
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=79.98 E-value=0.3 Score=51.04 Aligned_cols=59 Identities=8% Similarity=0.108 Sum_probs=17.4
Q ss_pred ccccccCceEEEEEEEcC-CceEEE------EEecCCC--cchHHHHHHHHHHHhcCCCCCccccceEEEe
Q 047954 274 EGLGKGIFGNSYKALLEG-RAPVVV------KRLRDLK--PLITEEFRKQLLVIADQKHPNLLPLLAYYFS 335 (582)
Q Consensus 274 ~~lG~G~~g~Vy~~~~~~-~~~vav------K~~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~~~~~~ 335 (582)
+.|| ||.||+|.+.. ..+||| |..+... ......|.+|..++.+++|||+++.+++...
T Consensus 148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred ccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 4566 99999999865 367888 7665322 2233467888899999999999999988754
No 450
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=78.59 E-value=4.7 Score=40.27 Aligned_cols=84 Identities=19% Similarity=0.175 Sum_probs=53.3
Q ss_pred cCCCCCCcEEEccCCccccccCCCCCCCCCCEEeCCCCcccccccccccCCCcCCeeecccCcccCCCCCC---CCCCCC
Q 047954 42 FADIPELIVINFKNNIISGNFMNFSSNHKLKDIDLSGNKFYGEISRSLLSLKFLESLQLQNNNLTGPVPEF---NQSSLK 118 (582)
Q Consensus 42 ~~~l~~L~~l~l~~n~~~g~~~~~~~~~~l~~l~l~~N~l~g~ip~~~~~l~~l~~l~l~~N~l~g~ip~~---~~~~l~ 118 (582)
+....+|..+.+..+--.=.--.+.++..|+.+.+..+ ++-.=...+.++.+|+.+.+..+ ++ .|+.. .+++|+
T Consensus 213 f~~~~~l~~i~~~~~~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~ 289 (379)
T 4h09_A 213 FSYGKNLKKITITSGVTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VK-TVPYLLCSGCSNLT 289 (379)
T ss_dssp TTTCSSCSEEECCTTCCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CS-EECTTTTTTCTTCC
T ss_pred cccccccceeeeccceeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ce-eccccccccccccc
Confidence 45667788877765422111124667788888888765 43222345677888888888654 32 34442 578888
Q ss_pred EEEeecCccc
Q 047954 119 VFNVSNNNLS 128 (582)
Q Consensus 119 ~l~ls~N~l~ 128 (582)
.+++.+|.++
T Consensus 290 ~i~l~~~~i~ 299 (379)
T 4h09_A 290 KVVMDNSAIE 299 (379)
T ss_dssp EEEECCTTCC
T ss_pred cccccccccc
Confidence 8888877664
No 451
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=77.75 E-value=2.9 Score=27.52 Aligned_cols=8 Identities=13% Similarity=-0.110 Sum_probs=3.2
Q ss_pred hhHHHHHH
Q 047954 179 KIFYFLLA 186 (582)
Q Consensus 179 ~i~~iv~~ 186 (582)
.+...+++
T Consensus 11 aIA~gVVg 18 (44)
T 2l2t_A 11 LIAAGVIG 18 (44)
T ss_dssp HHHHHHHH
T ss_pred eEEEeehH
Confidence 34444443
No 452
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=74.00 E-value=3 Score=27.53 Aligned_cols=6 Identities=17% Similarity=-0.042 Sum_probs=2.3
Q ss_pred hHHHHH
Q 047954 180 IFYFLL 185 (582)
Q Consensus 180 i~~iv~ 185 (582)
+...++
T Consensus 13 IA~gVV 18 (44)
T 2ks1_B 13 IATGMV 18 (44)
T ss_dssp STHHHH
T ss_pred EEeehh
Confidence 333333
No 453
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=61.91 E-value=9.1 Score=24.33 Aligned_cols=13 Identities=15% Similarity=0.125 Sum_probs=5.2
Q ss_pred hHHHHHHHHHHHH
Q 047954 180 IFYFLLAALCIVT 192 (582)
Q Consensus 180 i~~iv~~~~~~~~ 192 (582)
+..+++++++.+.
T Consensus 13 IAGiVvG~v~gv~ 25 (38)
T 2k1k_A 13 IVAVIFGLLLGAA 25 (38)
T ss_dssp HHHHHHHHHHHHH
T ss_pred eeeeehHHHHHHH
Confidence 3334444443333
No 454
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=61.69 E-value=6.6 Score=25.82 Aligned_cols=6 Identities=0% Similarity=0.052 Sum_probs=2.4
Q ss_pred HHHHHH
Q 047954 181 FYFLLA 186 (582)
Q Consensus 181 ~~iv~~ 186 (582)
...+++
T Consensus 15 a~~vVG 20 (44)
T 2jwa_A 15 ISAVVG 20 (44)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333444
No 455
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=29.71 E-value=46 Score=23.76 Aligned_cols=15 Identities=20% Similarity=0.124 Sum_probs=7.2
Q ss_pred HHHHHHHHHHHhhhh
Q 047954 185 LAALCIVTVLMLFIF 199 (582)
Q Consensus 185 ~~~~~~~~l~~l~i~ 199 (582)
.+++++++++.+.++
T Consensus 15 Gg~~~lll~~glcI~ 29 (70)
T 2klu_A 15 GGVAGLLLFIGLGIF 29 (70)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHH
Confidence 344444444555555
No 456
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=22.42 E-value=3.8e+02 Score=26.07 Aligned_cols=133 Identities=14% Similarity=0.092 Sum_probs=67.3
Q ss_pred cCceEEEEEEEcCCceEEEEEecCCCcchHHHHHHHHHHHhcCCCCCccccceEE--------------E---------e
Q 047954 279 GIFGNSYKALLEGRAPVVVKRLRDLKPLITEEFRKQLLVIADQKHPNLLPLLAYY--------------F---------S 335 (582)
Q Consensus 279 G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~~~~--------------~---------~ 335 (582)
++.+.||.+.. ++..|+||-. .....+.+-.++...-.+.-|+..-+ .+. . .
T Consensus 79 ~Gstgvff~~t-d~~~~VVK~s---~~l~~E~l~s~LA~~LGlpiP~~Riv-~~~~~E~~e~~~~L~~~~~~~~~l~~l~ 153 (342)
T 1cja_A 79 KGTEGLFFVET-ESGVFIVKRS---TNIESETFCSLLCMRLGLHAPKVRVV-SSNSEEGTNMLECLAAIDKSFRVITTLA 153 (342)
T ss_dssp STTSCEEEEEE-SSCEEEEECC---TTHHHHHHHHHHHHHHTCCCCCEEEE-ESSSHHHHHHHHHHHHHCSSSCHHHHHT
T ss_pred CCCCCeEEEEe-CCCEEEEeCc---HHHHHHHHHHHHHHHhCCCCCCeeEE-eeCcHHHHHHHHHHHHhhhhhHHHHHhh
Confidence 33455666555 4667888854 23344445455544444444442111 000 0 1
Q ss_pred CCeeEEEEEeCCCCChHHHHhcCCCCCCCCccchHHHHHHHHHH--HHHHHHHhccCCCCCCCccee-cCCCCCCeeecC
Q 047954 336 NDEKLLVYKFAGNGNLFNRIHGGKSSKNRIPFRCRSRLLVARGV--ARALEYLHHKDKSRTQSAVIH-GNLKSTNILLDD 412 (582)
Q Consensus 336 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i--a~gL~yLH~~~~~~~~~~ivH-~Dlkp~NILl~~ 412 (582)
....+++|||.+|..|.+.-+... ...+.. +.+.++ +-+++++..+.- ..|.+. .--.+.|||+++
T Consensus 154 ~~~~~l~meyv~G~~L~e~~~~~~----~~~f~~----~~~k~LG~Ii~FDi~InN~D---R~Pl~W~n~GN~~NIL~~~ 222 (342)
T 1cja_A 154 NQANILLMELVRGITLNKLTTTSA----PEVLTK----STMQQLGSLMALDVIVNNSD---RLPIAWTNEGNLDNIMLSE 222 (342)
T ss_dssp TCSEEEEEECCCEEESTTCCSSSH----HHHSCH----HHHHHHHHHHHHHHHHTCCS---SSCSSSCSCCCGGGEEEES
T ss_pred cccceehhhhcCCCccccchhhhh----hhhcCH----HHHHhhchhheehhhhcCCc---cCcccccCCCChhheEEeC
Confidence 224569999998755543211000 001111 222332 346666666541 122332 235789999987
Q ss_pred CCc-eEEeeccccccc
Q 047954 413 NEM-VLVSDYGFSSLV 427 (582)
Q Consensus 413 ~~~-~kl~DfG~a~~~ 427 (582)
+.. +.++|-+++..-
T Consensus 223 ~n~~~~~IDhn~af~~ 238 (342)
T 1cja_A 223 RGATVVPIDSKIIPLD 238 (342)
T ss_dssp BTTCEEECSCCCCCCC
T ss_pred CCCeEEEEcCCccccC
Confidence 554 888999887543
No 457
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=22.34 E-value=7.2e+02 Score=26.34 Aligned_cols=86 Identities=14% Similarity=0.169 Sum_probs=48.9
Q ss_pred cccceEEEeCCeeEEEEEeCCCCChHHHHhc----------CCCCCCC-CccchHHHHHHHHHHHH--HHHHHhccCCCC
Q 047954 327 LPLLAYYFSNDEKLLVYKFAGNGNLFNRIHG----------GKSSKNR-IPFRCRSRLLVARGVAR--ALEYLHHKDKSR 393 (582)
Q Consensus 327 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~----------~~~~~~~-~~l~~~~~~~i~~~ia~--gL~yLH~~~~~~ 393 (582)
+..|.+........ +.|++++-++.+.+.. ....... ....+..+..+++.+|- -+.|+=.-
T Consensus 402 i~~Y~Vipls~~~G-lIE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILGi---- 476 (614)
T 3ls8_A 402 LTPYKVLATSTKHG-FMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGV---- 476 (614)
T ss_dssp CCCCCEEESSSSEE-EEECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred eeccEEEEecCCCc-eEEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeeec----
Confidence 34455444444333 4577776555554432 1111100 11224455566665543 45555432
Q ss_pred CCCcceecCCCCCCeeecCCCceEEeecccc
Q 047954 394 TQSAVIHGNLKSTNILLDDNEMVLVSDYGFS 424 (582)
Q Consensus 394 ~~~~ivH~Dlkp~NILl~~~~~~kl~DfG~a 424 (582)
+|=.++||||+.+|.+.-+|||..
T Consensus 477 -------gDRH~~NILld~tG~v~HIDFG~~ 500 (614)
T 3ls8_A 477 -------GDRHLDNLLLTKTGKLFHIDFGYI 500 (614)
T ss_dssp -------CCCCTTSEEECTTSCEEECCCSSC
T ss_pred -------cCCCCcceeEcCCCCEeeeehHHh
Confidence 477799999999999999999986
Done!