Query 047957
Match_columns 211
No_of_seqs 263 out of 1345
Neff 6.3
Searched_HMMs 13730
Date Mon Mar 25 08:07:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047957.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/047957hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2cyga1 c.1.8.3 (A:29-340) Pla 39.2 1.6 0.00012 35.7 -1.7 73 25-109 228-310 (312)
2 d2axti1 f.23.37.1 (I:1-35) Pho 32.9 10 0.00075 20.9 1.6 22 1-22 1-22 (35)
3 d1ghsa_ c.1.8.3 (A:) Plant bet 30.3 0.89 6.5E-05 37.2 -4.8 74 25-109 223-304 (306)
4 d2gsva1 a.23.7.1 (A:3-69) Hypo 26.8 11 0.00084 23.5 1.3 9 179-187 26-34 (67)
5 d1aq0a_ c.1.8.3 (A:) Plant bet 24.3 1.5 0.00011 35.6 -4.4 74 24-108 223-303 (306)
6 d2dlka1 g.37.1.1 (A:8-37) Zinc 11.2 51 0.0037 17.1 1.3 12 97-108 2-13 (30)
7 d1ijda_ f.3.1.1 (A:) Light-har 9.3 20 0.0015 21.0 -0.9 14 31-44 2-15 (46)
8 d1nkza_ f.3.1.1 (A:) Light-har 8.4 25 0.0018 21.1 -0.8 14 31-44 2-15 (53)
9 d1tf3a1 g.37.1.1 (A:1-40) Tran 6.1 61 0.0044 17.1 0.2 12 150-161 3-14 (31)
10 d2j7ja3 g.37.1.1 (A:58-85) Tra 5.0 89 0.0065 15.9 0.4 11 190-200 5-15 (28)
No 1
>d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]}
Probab=39.15 E-value=1.6 Score=35.65 Aligned_cols=73 Identities=11% Similarity=0.194 Sum_probs=46.9
Q ss_pred CcccccCCCceeeEeCCCCC------HHHHHHHHHHhcccccccccCCCCCCCCCCCchhhhHHHHHHHHHHhC----CC
Q 047957 25 GKLKMASAQRTWCIANPLTN------ISALLGNLDFACSHVDCQLIQQGGSCFYPNTPIHHASFAMNLYFQVMG----RH 94 (211)
Q Consensus 25 ~~~~~~~~~~~wCV~~~~~~------~~~l~~~ld~AC~~~dC~~I~~~Gtc~~p~~~~~~aSyafn~Yyq~~~----~~ 94 (211)
+..+++++|++| |+.. .++.+..++..... . ..|||.+|....+ -|.|.+|.|..+ ++
T Consensus 228 ~~~~ivI~EtGW----Ps~G~~~~as~~na~~y~~~l~~~----~--~~gtp~~~~~~i~--~f~FeaFDE~wK~G~~E~ 295 (312)
T d2cyga1 228 ANVAVVVSESGW----PSAGGGAEASTSNAQTYNQNLIRH----V--GGGTPRRPGKEIE--AYIFEMFNENQKAGGIEQ 295 (312)
T ss_dssp TTCCEEEEEECC----CSSSSSTTSSHHHHHHHHHHHHHH----G--GGCCSSSCSSCCC--EEESCSBCCTTSCSSGGG
T ss_pred CCCceEEecCCc----ccCCCCCCCCHHHHHHHHHHHHHH----H--hcCCCCCCCCCcc--EEEEeEeCCCCCCCCccC
Confidence 567899999999 7752 22333333333222 1 2388888887666 788888877765 56
Q ss_pred ccCccCCCCcceecC
Q 047957 95 SSHCDFRGSGLISLT 109 (211)
Q Consensus 95 ~~~CdF~g~a~v~~~ 109 (211)
+|+.+..+...++..
T Consensus 296 ~wGlf~~d~~~ky~l 310 (312)
T d2cyga1 296 NFGLFYPNKQPVYQI 310 (312)
T ss_dssp CCCSBCTTSCBSSCC
T ss_pred ccccCCCCCCEecCC
Confidence 677776666655543
No 2
>d2axti1 f.23.37.1 (I:1-35) Photosystem II reaction center protein I, PsbI {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=32.90 E-value=10 Score=20.93 Aligned_cols=22 Identities=18% Similarity=0.415 Sum_probs=17.4
Q ss_pred CCcccchhHHHHHHHHHHHHhh
Q 047957 1 MLKLPLSLRTTMCLLFLFISFN 22 (211)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~ 22 (211)
||.|-|..-+...||..|.+|+
T Consensus 1 MltLKi~Vy~vV~fFv~lFiFG 22 (35)
T d2axti1 1 METLKITVYIVVTFFVLLFVFG 22 (35)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEehhhHHHHHHHHHHHh
Confidence 7778888888888877777765
No 3
>d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]}
Probab=30.29 E-value=0.89 Score=37.22 Aligned_cols=74 Identities=9% Similarity=0.059 Sum_probs=44.5
Q ss_pred CcccccCCCceeeEeCCCCCHHHHHHHHHHhccc---ccccccCCCCCCCCCCCchhhhHHHHHHHHHHhC-----CCcc
Q 047957 25 GKLKMASAQRTWCIANPLTNISALLGNLDFACSH---VDCQLIQQGGSCFYPNTPIHHASFAMNLYFQVMG-----RHSS 96 (211)
Q Consensus 25 ~~~~~~~~~~~wCV~~~~~~~~~l~~~ld~AC~~---~dC~~I~~~Gtc~~p~~~~~~aSyafn~Yyq~~~-----~~~~ 96 (211)
...+++++|++| |+.... .+...+|-.+ ..|.. ..||+.+|.. .+ -|.|.+|.|..+ +++|
T Consensus 223 ~~k~ivI~ETGW----PS~G~~--~as~~na~~y~~~l~~~~--~~gt~~r~~~-i~--~f~FeaFDE~wK~~~~~E~~w 291 (306)
T d1ghsa_ 223 PAVKVVVSESGW----PSAGGF--AASAGNARTYNQGLINHV--GGGTPKKREA-LE--TYIFAMFNENQKTGDATERSF 291 (306)
T ss_dssp TTCCEEEEEECC----CSSSST--TCCHHHHHHHHHHHHTTG--GGCCSSCCSC-CC--EEEECSBCCTTCCSSGGGGGC
T ss_pred CCCceEEccccc----ccCCCC--CCCHHHHHHHHHHHHHHH--hcCCCCCCCC-ce--EEEEeeeCcCCCCCCCccCcc
Confidence 467899999999 876321 1112222211 23443 3488888763 44 688888888765 4567
Q ss_pred CccCCCCcceecC
Q 047957 97 HCDFRGSGLISLT 109 (211)
Q Consensus 97 ~CdF~g~a~v~~~ 109 (211)
+.+..+...++..
T Consensus 292 Glf~~d~~~ky~~ 304 (306)
T d1ghsa_ 292 GLFNPDKSPAYNI 304 (306)
T ss_dssp CSBCTTSCBSSCC
T ss_pred ccCCCCCCEecCC
Confidence 7766666555543
No 4
>d2gsva1 a.23.7.1 (A:3-69) Hypothetical protein YvfG {Bacillus subtilis [TaxId: 1423]}
Probab=26.82 E-value=11 Score=23.48 Aligned_cols=9 Identities=56% Similarity=0.995 Sum_probs=7.6
Q ss_pred HHHHHHHHh
Q 047957 179 FAMNLYYQT 187 (211)
Q Consensus 179 ya~N~Yy~~ 187 (211)
-|||+||+.
T Consensus 26 hAmNaYYrs 34 (67)
T d2gsva1 26 HAMNSYYRS 34 (67)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 489999986
No 5
>d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]}
Probab=24.34 E-value=1.5 Score=35.60 Aligned_cols=74 Identities=11% Similarity=0.141 Sum_probs=43.4
Q ss_pred CCcccccCCCceeeEeCCCCCHHHHHHHHHHhccc---ccccccCCCCCCCCCCCchhhhHHHHHHHHHHhC----CCcc
Q 047957 24 GGKLKMASAQRTWCIANPLTNISALLGNLDFACSH---VDCQLIQQGGSCFYPNTPIHHASFAMNLYFQVMG----RHSS 96 (211)
Q Consensus 24 ~~~~~~~~~~~~wCV~~~~~~~~~l~~~ld~AC~~---~dC~~I~~~Gtc~~p~~~~~~aSyafn~Yyq~~~----~~~~ 96 (211)
.+..+++++|++| |+.... .+...+|-.+ ..|.. ..|++.+|+. .+ .|.|.+|.|..+ +++|
T Consensus 223 ~~~k~ivI~EtGW----PS~G~~--~as~~na~~y~~~l~~~~--~~gt~~~~~~-i~--~f~FeaFDE~wK~g~~E~~w 291 (306)
T d1aq0a_ 223 GSSVKLVVSESGW----PSGGGT--AATPANARFYNQHLINHV--GRGTPRHPGA-IE--TYIFAMFNENQKDSGVEQNW 291 (306)
T ss_dssp CTTCCEEEEECCC----CSSSST--TCCHHHHHHHHHHHHHHT--TTBCSSSBSC-CC--BEESCSBCCTTSCSSGGGCC
T ss_pred CCCCceEEecccc----ccCCCC--CCCHHHHHHHHHHHHHHH--hcCCCCCCCC-ee--EEEEeeeCcCCCCCCccCee
Confidence 3578899999999 775221 1122222111 22332 3378888774 34 688888877765 5667
Q ss_pred CccCCCCcceec
Q 047957 97 HCDFRGSGLISL 108 (211)
Q Consensus 97 ~CdF~g~a~v~~ 108 (211)
+.+..+...++.
T Consensus 292 Glf~~d~~~ky~ 303 (306)
T d1aq0a_ 292 GLFYPNMQHVYP 303 (306)
T ss_dssp CSBCTTSCBSSC
T ss_pred eeECCCCCEecC
Confidence 766665555544
No 6
>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.18 E-value=51 Score=17.06 Aligned_cols=12 Identities=50% Similarity=0.872 Sum_probs=9.1
Q ss_pred CccCCCCcceec
Q 047957 97 HCDFRGSGLISL 108 (211)
Q Consensus 97 ~CdF~g~a~v~~ 108 (211)
.|+|+|-+.|-+
T Consensus 2 ~cdf~gc~kifs 13 (30)
T d2dlka1 2 PCDFPGCGRIFS 13 (30)
T ss_dssp ECSSTTTCCEES
T ss_pred CCCCCCchhhhc
Confidence 489998887753
No 7
>d1ijda_ f.3.1.1 (A:) Light-harvesting complex subunits {Rhodoblastus acidophilus [TaxId: 1074]}
Probab=9.34 E-value=20 Score=20.96 Aligned_cols=14 Identities=14% Similarity=0.534 Sum_probs=10.9
Q ss_pred CCCceeeEeCCCCC
Q 047957 31 SAQRTWCIANPLTN 44 (211)
Q Consensus 31 ~~~~~wCV~~~~~~ 44 (211)
..++.|+|+||.+-
T Consensus 2 n~gkiW~VV~PtvG 15 (46)
T d1ijda_ 2 NQGKIWTVVPPAFG 15 (46)
T ss_dssp TTGGGGGTSCHHHH
T ss_pred CCceEEEEECCCcC
Confidence 45778999998864
No 8
>d1nkza_ f.3.1.1 (A:) Light-harvesting complex subunits {Purple bacterium (Rhodoblastus acidophilus) [TaxId: 1074]}
Probab=8.40 E-value=25 Score=21.13 Aligned_cols=14 Identities=21% Similarity=0.684 Sum_probs=10.5
Q ss_pred CCCceeeEeCCCCC
Q 047957 31 SAQRTWCIANPLTN 44 (211)
Q Consensus 31 ~~~~~wCV~~~~~~ 44 (211)
...+.|+|+||.+-
T Consensus 2 nqgkiW~VV~PtVG 15 (53)
T d1nkza_ 2 NQGKIWTVVNPAIG 15 (53)
T ss_dssp CCTTGGGTSCHHHH
T ss_pred CCceEEEEECCCcC
Confidence 35678999988764
No 9
>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}
Probab=6.11 E-value=61 Score=17.07 Aligned_cols=12 Identities=33% Similarity=1.176 Sum_probs=9.0
Q ss_pred HhhcCCCcCCcC
Q 047957 150 NYACNYVDCSPT 161 (211)
Q Consensus 150 ~yaCg~~dC~~I 161 (211)
.|+|+..||++-
T Consensus 3 ~~iCsf~dC~A~ 14 (31)
T d1tf3a1 3 RYICSFADCGAA 14 (31)
T ss_dssp CEECSSGGGCCE
T ss_pred ceEeeCCCcchh
Confidence 378888888764
No 10
>d2j7ja3 g.37.1.1 (A:58-85) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}
Probab=4.97 E-value=89 Score=15.93 Aligned_cols=11 Identities=36% Similarity=0.709 Sum_probs=7.6
Q ss_pred CCCCCCCCCCc
Q 047957 190 KNTASCDFRNS 200 (211)
Q Consensus 190 ~~~~aCdF~G~ 200 (211)
+..++|.|.|.
T Consensus 5 ~kd~tc~fvgk 15 (28)
T d2j7ja3 5 KKDDSCSFVGK 15 (28)
T ss_dssp CSCSSCCCEES
T ss_pred ccCCcccccch
Confidence 34678888774
Done!