Your job contains 1 sequence.
>047960
MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES
HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN
SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN
AGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNARGLRS
AGQRHRSFDMNMESRSGTPSEDDEKVSRNGNYRPFKPPLENSLDDFDQSGEKYRDAWQHG
IQKKQSSGGKGSPRLEDLVDAFWWVGLYYTLTLTGSEGIELSHQVCGSPNNTREGASRCK
DVDWAAFSCTS
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 047960
(371 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2126480 - symbol:AT4G30100 species:3702 "Arabi... 1105 5.9e-112 1
TAIR|locus:2059088 - symbol:AT2G19120 "AT2G19120" species... 918 3.9e-92 1
POMBASE|SPBC29A10.10c - symbol:SPBC29A10.10c "tRNA-splici... 422 3.5e-39 2
UNIPROTKB|G4NIZ8 - symbol:MGG_02784 "DNA-binding protein ... 433 4.2e-39 1
CGD|CAL0003335 - symbol:SEN1 species:5476 "Candida albica... 425 2.9e-38 1
SGD|S000004422 - symbol:SEN1 "Presumed helicase and subun... 425 3.4e-38 1
TAIR|locus:2130384 - symbol:MAA3 "MAGATAMA 3" species:370... 386 8.1e-35 1
POMBASE|SPAC6G9.10c - symbol:sen1 "ATP-dependent 5' to 3'... 380 1.4e-33 1
TAIR|locus:2152627 - symbol:AT5G37030 species:3702 "Arabi... 363 1.1e-32 1
TAIR|locus:2018561 - symbol:AT1G65810 species:3702 "Arabi... 363 4.2e-32 1
DICTYBASE|DDB_G0274399 - symbol:DDB_G0274399 "DNA2/NAM7 h... 358 1.2e-31 1
DICTYBASE|DDB_G0285243 - symbol:DDB_G0285243 "putative sp... 362 1.5e-31 1
TAIR|locus:2173033 - symbol:AT5G52090 species:3702 "Arabi... 353 1.7e-31 1
TAIR|locus:2166173 - symbol:AT5G37150 species:3702 "Arabi... 350 6.6e-31 1
TAIR|locus:2166183 - symbol:AT5G37160 species:3702 "Arabi... 345 2.5e-30 1
TAIR|locus:2166163 - symbol:AT5G37140 species:3702 "Arabi... 334 2.1e-29 1
UNIPROTKB|E1C4T7 - symbol:Gga.18015 "Uncharacterized prot... 332 3.0e-28 1
DICTYBASE|DDB_G0288923 - symbol:upf1 "regulator of nonsen... 327 4.4e-28 1
TAIR|locus:2018536 - symbol:AT1G65780 species:3702 "Arabi... 317 3.6e-27 1
ASPGD|ASPL0000056713 - symbol:AN0646 species:162425 "Emer... 317 3.7e-27 1
TAIR|locus:2171007 - symbol:LBA1 "LOW-LEVEL BETA-AMYLASE ... 317 4.7e-27 1
UNIPROTKB|G4ND47 - symbol:MGG_00976 "Regulator-nonsense t... 313 1.0e-26 1
CGD|CAL0003666 - symbol:NAM7 species:5476 "Candida albica... 309 2.4e-26 1
UNIPROTKB|Q5A507 - symbol:NAM7 "Putative uncharacterized ... 309 2.4e-26 1
MGI|MGI:107995 - symbol:Upf1 "UPF1 regulator of nonsense ... 306 5.9e-26 1
DICTYBASE|DDB_G0268924 - symbol:DDB_G0268924 "Helicase SE... 308 6.9e-26 1
ZFIN|ZDB-GENE-040426-2836 - symbol:upf1 "upf1 regulator o... 303 1.2e-25 1
UNIPROTKB|E1C0J4 - symbol:UPF1 "Uncharacterized protein" ... 303 1.2e-25 1
UNIPROTKB|E1BEK9 - symbol:UPF1 "Uncharacterized protein" ... 303 1.2e-25 1
UNIPROTKB|E1C0J3 - symbol:UPF1 "Uncharacterized protein" ... 303 1.2e-25 1
UNIPROTKB|Q92900 - symbol:UPF1 "Regulator of nonsense tra... 303 1.2e-25 1
UNIPROTKB|E2RL81 - symbol:UPF1 "Uncharacterized protein" ... 303 1.2e-25 1
ZFIN|ZDB-GENE-070402-1 - symbol:setx "senataxin" species:... 305 2.1e-25 1
FB|FBgn0030354 - symbol:Upf1 "Upf1" species:7227 "Drosoph... 301 2.2e-25 1
POMBASE|SPAC16C9.06c - symbol:upf1 "ATP-dependent RNA hel... 297 3.9e-25 1
DICTYBASE|DDB_G0268660 - symbol:DDB_G0268660 "DNA2/NAM7 h... 301 5.4e-25 1
DICTYBASE|DDB_G0268662 - symbol:DDB_G0268662 "DNA2/NAM7 h... 300 7.6e-25 1
DICTYBASE|DDB_G0268914 - symbol:DDB_G0268914 species:4468... 299 1.9e-24 1
DICTYBASE|DDB_G0289529 - symbol:DDB_G0289529 species:4468... 294 2.0e-24 1
SGD|S000004685 - symbol:NAM7 "ATP-dependent RNA helicase ... 285 8.1e-24 1
UNIPROTKB|F1S0U6 - symbol:SETX "Uncharacterized protein" ... 290 9.3e-24 1
TAIR|locus:2135472 - symbol:AT4G05540 species:3702 "Arabi... 280 1.5e-23 1
UNIPROTKB|Q7Z333 - symbol:SETX "Probable helicase senatax... 288 1.5e-23 1
MGI|MGI:2443480 - symbol:Setx "senataxin" species:10090 "... 287 1.9e-23 1
UNIPROTKB|D4AEB3 - symbol:Setx "Protein Setx" species:101... 282 6.6e-23 1
UNIPROTKB|E1BAS6 - symbol:SETX "Uncharacterized protein" ... 280 1.1e-22 1
WB|WBGene00004880 - symbol:smg-2 species:6239 "Caenorhabd... 273 1.8e-22 1
UNIPROTKB|F1PCI1 - symbol:C4orf21 "Uncharacterized protei... 271 2.8e-22 1
UNIPROTKB|F1PHA4 - symbol:SETX "Uncharacterized protein" ... 274 4.4e-22 1
UNIPROTKB|E1BG37 - symbol:E1BG37 "Uncharacterized protein... 257 8.3e-20 1
UNIPROTKB|Q6ZU11 - symbol:Q6ZU11 "Uncharacterized protein... 256 1.1e-19 1
RGD|1565575 - symbol:Setx "senataxin" species:10116 "Ratt... 176 2.5e-19 2
UNIPROTKB|G5EA02 - symbol:C4orf21 "Uncharacterized protei... 256 3.5e-19 1
RGD|1589127 - symbol:LOC684558 "similar to regulator of n... 244 5.4e-19 1
UNIPROTKB|E1BQD2 - symbol:C4H4orf21 "Uncharacterized prot... 250 8.6e-19 1
SGD|S000001500 - symbol:HCS1 "Hexameric DNA polymerase al... 241 7.5e-18 1
MGI|MGI:97054 - symbol:Mov10 "Moloney leukemia virus 10" ... 243 8.0e-18 1
RGD|2322000 - symbol:LOC100363957 "hypothetical protein L... 241 1.3e-17 1
UNIPROTKB|F1SBP9 - symbol:MOV10 "Uncharacterized protein"... 240 1.9e-17 1
RGD|1598327 - symbol:Mov10 "Moloney leukemia virus 10" sp... 240 1.9e-17 1
CGD|CAL0006154 - symbol:orf19.6199 species:5476 "Candida ... 239 2.1e-17 2
UNIPROTKB|Q5AAW1 - symbol:HCS1 "Putative uncharacterized ... 239 2.1e-17 2
UNIPROTKB|Q0V8H6 - symbol:MOV10 "Putative helicase MOV-10... 238 3.4e-17 1
ZFIN|ZDB-GENE-091230-8 - symbol:mov10a "Moloney leukemia ... 236 5.9e-17 1
UNIPROTKB|J9P7Z9 - symbol:MOV10 "Uncharacterized protein"... 235 7.5e-17 1
UNIPROTKB|F1P7T4 - symbol:MOV10 "Uncharacterized protein"... 235 7.8e-17 1
UNIPROTKB|Q9HCE1 - symbol:MOV10 "Putative helicase MOV-10... 230 3.1e-16 1
POMBASE|SPCC737.07c - symbol:SPCC737.07c "DNA polymerase ... 225 6.2e-16 1
TAIR|locus:2200996 - symbol:SDE3 "SILENCING DEFECTIVE" sp... 225 1.2e-15 1
UNIPROTKB|F1RY71 - symbol:IGHMBP2 "Uncharacterized protei... 221 3.5e-15 1
UNIPROTKB|E1BZJ8 - symbol:MOV10L1 "Uncharacterized protei... 221 4.5e-15 1
TAIR|locus:2056896 - symbol:AT2G03270 species:3702 "Arabi... 216 6.6e-15 1
GENEDB_PFALCIPARUM|MAL7P1.12 - symbol:MAL7P1.12 "erythroc... 222 7.7e-15 1
UNIPROTKB|Q8IC35 - symbol:MAL7P1.12 "Erythrocyte membrane... 222 7.7e-15 1
ZFIN|ZDB-GENE-060526-371 - symbol:mov10b.2 "Moloney leuke... 216 1.4e-14 1
DICTYBASE|DDB_G0271732 - symbol:DDB_G0271732 "AN1-type zi... 216 1.4e-14 1
UNIPROTKB|Q8QHA5 - symbol:dna2 "DNA replication ATP-depen... 215 1.9e-14 1
UNIPROTKB|E2R760 - symbol:IGHMBP2 "Uncharacterized protei... 212 3.8e-14 1
UNIPROTKB|E2R8W1 - symbol:IGHMBP2 "Uncharacterized protei... 212 3.9e-14 1
FB|FBgn0035842 - symbol:CG7504 species:7227 "Drosophila m... 209 1.7e-13 1
UNIPROTKB|F6QXW0 - symbol:dna2 "DNA replication ATP-depen... 206 2.0e-13 1
UNIPROTKB|F1MHU8 - symbol:IGHMBP2 "Uncharacterized protei... 205 2.4e-13 1
ZFIN|ZDB-GENE-030131-9089 - symbol:mov10b.1 "Moloney leuk... 204 3.3e-13 1
UNIPROTKB|E1C0Z0 - symbol:HELZ2 "Uncharacterized protein"... 208 3.6e-13 1
UNIPROTKB|E1BY42 - symbol:E1BY42 "Uncharacterized protein... 203 4.0e-13 1
RGD|68325 - symbol:Ighmbp2 "immunoglobulin mu binding pro... 203 4.1e-13 1
UNIPROTKB|Q9EQN5 - symbol:Ighmbp2 "DNA-binding protein SM... 203 4.1e-13 1
UNIPROTKB|Q60560 - symbol:IGHMBP2 "DNA-binding protein SM... 202 5.3e-13 1
RGD|1304735 - symbol:Mov10l1 "Mov10l1, Moloney leukemia v... 196 1.0e-12 1
MGI|MGI:99954 - symbol:Ighmbp2 "immunoglobulin mu binding... 198 1.5e-12 1
UNIPROTKB|Q9BXT6 - symbol:MOV10L1 "Putative helicase Mov1... 198 2.0e-12 1
MGI|MGI:1891384 - symbol:Mov10l1 "Moloney leukemia virus ... 197 2.5e-12 1
UNIPROTKB|G3X7G5 - symbol:MOV10L1 "Uncharacterized protei... 195 4.3e-12 1
FB|FBgn0034187 - symbol:CG6967 species:7227 "Drosophila m... 193 6.9e-12 2
UNIPROTKB|F1RXR7 - symbol:MOV10L1 "Uncharacterized protei... 192 9.4e-12 1
UNIPROTKB|P38935 - symbol:IGHMBP2 "DNA-binding protein SM... 190 1.2e-11 1
UNIPROTKB|J9NRI6 - symbol:DNA2 "Uncharacterized protein" ... 187 1.4e-11 1
UNIPROTKB|Q9P2E3 - symbol:ZNFX1 "NFX1-type zinc finger-co... 192 1.6e-11 1
FB|FBgn0033889 - symbol:CG6701 species:7227 "Drosophila m... 190 1.7e-11 1
WB|WBGene00014208 - symbol:ZK1067.2 species:6239 "Caenorh... 192 2.2e-11 1
WARNING: Descriptions of 56 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2126480 [details] [associations]
symbol:AT4G30100 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0009506 "plasmodesma"
evidence=IDA] GO:GO:0009506 EMBL:CP002687 EMBL:AL161576
GO:GO:0004519 eggNOG:COG1112 EMBL:AL078464 KO:K10706
InterPro:IPR026852 PANTHER:PTHR10887:SF27 HOGENOM:HOG000084788
ProtClustDB:CLSN2683158 IPI:IPI00535923 PIR:T08986
RefSeq:NP_194739.1 UniGene:At.31859 ProteinModelPortal:Q9SZW3
SMR:Q9SZW3 STRING:Q9SZW3 PaxDb:Q9SZW3 PRIDE:Q9SZW3
EnsemblPlants:AT4G30100.1 GeneID:829133 KEGG:ath:AT4G30100
TAIR:At4g30100 InParanoid:Q9SZW3 PhylomeDB:Q9SZW3
ArrayExpress:Q9SZW3 Genevestigator:Q9SZW3 Uniprot:Q9SZW3
Length = 1311
Score = 1105 (394.0 bits), Expect = 5.9e-112, P = 5.9e-112
Identities = 217/306 (70%), Positives = 253/306 (82%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+LL+VQYRMHP IRDFPSR+FYQGRLTDSESV PDE+YYKD VL+PY+FFD+ HGRES
Sbjct: 1004 LLLTVQYRMHPQIRDFPSRYFYQGRLTDSESVSTAPDEIYYKDSVLKPYLFFDISHGRES 1063
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
HRGGSVSY+N+DEA+F V +Y HLQ+TLKS+G GKV+VG+ITPYKLQLKCL+ EF N L+
Sbjct: 1064 HRGGSVSYENIDEARFCVGVYLHLQRTLKSLGGGKVSVGVITPYKLQLKCLKIEFGNALS 1123
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
+E +++YINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRA+RALWVMGN
Sbjct: 1124 QDELQEIYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRAKRALWVMGN 1183
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNARGLRS 240
A AL + +DWAALI D+KARNC+M+M+SLPK+F V K P + P K P NARG RS
Sbjct: 1184 ASALMKCEDWAALITDAKARNCFMEMESLPKDFPVP---KVPSFIP---KAP-NARGFRS 1236
Query: 241 AGQRHRSFDMNMESRSGTPSEDDEKVS-----RNGNYRPFKPPLENSLDDFDQSGEKYRD 295
G R RS DM+ ESRSGTPSEDD+K+S RNGN R ENS+DD D G++YRD
Sbjct: 1237 GGPRTRSIDMHPESRSGTPSEDDKKLSTTTFPRNGNSRR-----ENSVDDSDPPGDRYRD 1291
Query: 296 AWQHGI 301
AWQHGI
Sbjct: 1292 AWQHGI 1297
>TAIR|locus:2059088 [details] [associations]
symbol:AT2G19120 "AT2G19120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009506 "plasmodesma" evidence=IDA] GO:GO:0009506
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0004386 GO:GO:0004519
eggNOG:COG1112 EMBL:AC002392 KO:K10706 InterPro:IPR026852
PANTHER:PTHR10887:SF27 IPI:IPI00542366 PIR:T00533
RefSeq:NP_179502.1 UniGene:At.52824 ProteinModelPortal:O64476
SMR:O64476 PaxDb:O64476 PRIDE:O64476 EnsemblPlants:AT2G19120.1
GeneID:816429 KEGG:ath:AT2G19120 TAIR:At2g19120
HOGENOM:HOG000084788 InParanoid:O64476 OMA:DWAALIS PhylomeDB:O64476
ProtClustDB:CLSN2683158 ArrayExpress:O64476 Genevestigator:O64476
Uniprot:O64476
Length = 1090
Score = 918 (328.2 bits), Expect = 3.9e-92, P = 3.9e-92
Identities = 169/227 (74%), Positives = 199/227 (87%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
+LL+VQYRMHP IRDFPSR+FYQGRL DSES+ + PDE+YYKDPVLRPY+FF++ HGRES
Sbjct: 841 LLLTVQYRMHPQIRDFPSRYFYQGRLKDSESISSAPDEIYYKDPVLRPYLFFNISHGRES 900
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
HRGGSVSY+NVDEA+F V +Y HLQKTLKS+G GKV+VG+ITPYKLQLKCL+HEF N L
Sbjct: 901 HRGGSVSYENVDEARFCVGVYMHLQKTLKSLGAGKVSVGVITPYKLQLKCLKHEFGNALG 960
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGN 180
+E K++YINTVDAFQGQERDVIIMSCVRAS HGVGFV+DIRRMNVALTRARRALWVMGN
Sbjct: 961 QDELKEIYINTVDAFQGQERDVIIMSCVRASGHGVGFVSDIRRMNVALTRARRALWVMGN 1020
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPL 227
A AL +S+DWAALI+D++ RNC+M+MDSLP +F + K Y P+
Sbjct: 1021 ASALMKSEDWAALISDARGRNCFMEMDSLPLDFPIP---KVSSYNPM 1064
>POMBASE|SPBC29A10.10c [details] [associations]
symbol:SPBC29A10.10c "tRNA-splicing endonuclease
positive effector (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0006364 "rRNA processing"
evidence=ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=ISO] [GO:0016180 "snRNA processing" evidence=ISO]
[GO:0035649 "Nrd1 complex" evidence=ISO] [GO:0043144 "snoRNA
processing" evidence=ISO] InterPro:IPR024714 PomBase:SPBC29A10.10c
GO:GO:0005524 GO:GO:0005634 EMBL:CU329671 GO:GO:0008033
eggNOG:COG1112 GO:GO:0006364 GO:GO:0004004 GO:GO:0006369
GO:GO:0043144 GO:GO:0016180 KO:K10706 GO:GO:0035649
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
OrthoDB:EOG4MPMZ6 PIR:T40065 RefSeq:NP_596055.1
ProteinModelPortal:O94387 EnsemblFungi:SPBC29A10.10c.1
GeneID:2540523 KEGG:spo:SPBC29A10.10c NextBio:20801650
Uniprot:O94387
Length = 1944
Score = 422 (153.6 bits), Expect = 3.5e-39, Sum P(2) = 3.5e-39
Identities = 91/209 (43%), Positives = 138/209 (66%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LLS+QYRM+P I FPS+ FY +L D ++ + +++DP L Y FF+V HG E+
Sbjct: 1578 LLSIQYRMNPEISRFPSKFFYNSKLLDGPNMSAVTSRPWHEDPQLGIYRFFNV-HGTEAF 1636
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
S S NV+EA F + LYE L + ++ GK+ G++TPY+ Q++ L+ +F+
Sbjct: 1637 -SNSKSLYNVEEASFILLLYERLIQCYLNIDFEGKI--GVVTPYRSQVQQLRSQFQRKYG 1693
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVMG 179
S K L I+TVD FQGQE+D+II SCVR+S + G+GF+ D+RR+NVALTRA+ +L+++G
Sbjct: 1694 SIIFKHLDIHTVDGFQGQEKDIIIFSCVRSSMSGGIGFLQDLRRLNVALTRAKSSLYIVG 1753
Query: 180 NAGALTQSDDWAALIADSKARNCYMDMDS 208
N+ L Q D + +LI D+K R + D+ +
Sbjct: 1754 NSKPLMQEDIFYSLIEDAKTRGVWRDLSA 1782
Score = 43 (20.2 bits), Expect = 3.5e-39, Sum P(2) = 3.5e-39
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 203 YMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNAR 236
+M PK +ALAA A G+ P K+ H R
Sbjct: 1913 HMKKSKKPKS-KLALAAMAHGFAP--PKVEHFKR 1943
>UNIPROTKB|G4NIZ8 [details] [associations]
symbol:MGG_02784 "DNA-binding protein SMUBP-2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR024714 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0008033 GO:GO:0004386 EMBL:CM001237
GO:GO:0006364 GO:GO:0006369 GO:GO:0043144 GO:GO:0016180 KO:K10706
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
RefSeq:XP_003720957.1 EnsemblFungi:MGG_02784T0 GeneID:2682672
KEGG:mgr:MGG_02784 Uniprot:G4NIZ8
Length = 2037
Score = 433 (157.5 bits), Expect = 4.2e-39, P = 4.2e-39
Identities = 102/254 (40%), Positives = 140/254 (55%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL QYRMHP I +PS+ FY+G L D + L + ++ +P+L PY FFDV G +
Sbjct: 1642 LLDCQYRMHPEISLYPSKEFYEGLLADGSDMAKLRQQPWHDNPLLGPYRFFDV-EGIQER 1700
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
S N +E + +Y Q S K +GIITPYK QL L+ +F+
Sbjct: 1701 GSRGQSLVNTNEINVAIQIYTKFQADYASSIDMKGKIGIITPYKAQLFALRQKFQERWGE 1760
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWVMGN 180
+D+ NT DAFQG+E ++II SCVRAS G+GF+ DIRRMNV LTRAR +LW++G+
Sbjct: 1761 GVLEDIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRARSSLWILGD 1820
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPH---NARG 237
+ AL Q + W LI DSKAR+ Y S+ + + A K Y P +P N +
Sbjct: 1821 SRALRQGEFWNKLIEDSKARDRYTQ-GSIISQLRNSKAIKG-SYVPPPPAVPAPIGNVQR 1878
Query: 238 LRSAGQRHRSFDMN 251
+ G FD+N
Sbjct: 1879 RGTEGSDVEMFDVN 1892
>CGD|CAL0003335 [details] [associations]
symbol:SEN1 species:5476 "Candida albicans" [GO:0035649 "Nrd1
complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0016180 "snRNA processing" evidence=IEA] [GO:0031126 "snoRNA
3'-end processing" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0006378 "mRNA
polyadenylation" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0008033 "tRNA processing" evidence=IEA]
InterPro:IPR014016 InterPro:IPR024714 PROSITE:PS51198
CGD:CAL0003335 GO:GO:0005524 GO:GO:0005634 GO:GO:0008033
GO:GO:0004386 eggNOG:COG1112 EMBL:AACQ01000003 EMBL:AACQ01000004
GO:GO:0006364 GO:GO:0006369 GO:GO:0043144 GO:GO:0016180 KO:K10706
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
RefSeq:XP_723003.1 RefSeq:XP_723150.1 ProteinModelPortal:Q5ANG6
STRING:Q5ANG6 GeneID:3635255 GeneID:3635333 KEGG:cal:CaO19.13359
KEGG:cal:CaO19.5938 Uniprot:Q5ANG6
Length = 2018
Score = 425 (154.7 bits), Expect = 2.9e-38, P = 2.9e-38
Identities = 89/203 (43%), Positives = 128/203 (63%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L VQYRMHP I FPS FY +L D + ++ L ++KDP L PY FFD++ G+
Sbjct: 1603 MLDVQYRMHPMISKFPSSEFYNSKLKDGDGMLELNTRPWHKDPPLTPYRFFDIL-GKHEK 1661
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTL-KSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
+ S N DEA + L + L + L + GK+ GII+PYK Q++ ++ F
Sbjct: 1662 NELTRSLFNTDEAIVALQLTDKLMQLLPQDKFSGKI--GIISPYKEQIRKIKEVFVRKYG 1719
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMG 179
++ NTVD FQGQE+++IIMSCVRAS G VGF++D+RRMNVALTRA+ LW++G
Sbjct: 1720 KPILDEIDFNTVDGFQGQEKEIIIMSCVRASATGNVGFLSDVRRMNVALTRAKTTLWILG 1779
Query: 180 NAGALTQSDDWAALIADSKARNC 202
N +L++++ W L+ D+ RNC
Sbjct: 1780 NKDSLSRNEVWKKLLTDAGERNC 1802
>SGD|S000004422 [details] [associations]
symbol:SEN1 "Presumed helicase and subunit of the Nrd1
complex (Nrd1p-Nab3p-Sen1p)" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043144
"snoRNA processing" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=IEA;IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA;IMP] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0019904 "protein
domain specific binding" evidence=IMP;IDA] [GO:0031126 "snoRNA
3'-end processing" evidence=IMP] [GO:0006378 "mRNA polyadenylation"
evidence=IMP] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA;IMP] [GO:0016180 "snRNA processing"
evidence=IEA;IMP] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISS] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=ISS] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0035649 "Nrd1 complex" evidence=IDA]
[GO:0005657 "replication fork" evidence=IDA] [GO:0045005
"maintenance of fidelity involved in DNA-dependent DNA replication"
evidence=IMP] [GO:0031124 "mRNA 3'-end processing" evidence=IMP]
InterPro:IPR024714 SGD:S000004422 GO:GO:0005524 GO:GO:0005634
GO:GO:0019904 GO:GO:0006378 EMBL:BK006945 GO:GO:0008033
eggNOG:COG1112 EMBL:U20939 EMBL:U21094 GO:GO:0006364 GO:GO:0006369
GO:GO:0031126 GO:GO:0043141 KO:K00088 RefSeq:NP_013536.3
GeneID:851152 KEGG:sce:YLR432W GO:GO:0016180 KO:K10706
RefSeq:NP_013534.3 GeneID:851150 KEGG:sce:YLR430W GO:GO:0035649
GO:GO:0032575 InterPro:IPR024481 PANTHER:PTHR10887:SF164
Pfam:PF12726 EMBL:M74589 PIR:S53416 ProteinModelPortal:Q00416
SMR:Q00416 DIP:DIP-881N IntAct:Q00416 MINT:MINT-427565
STRING:Q00416 PaxDb:Q00416 PeptideAtlas:Q00416 EnsemblFungi:YLR430W
CYGD:YLR430w GeneTree:ENSGT00580000081652 HOGENOM:HOG000246755
OMA:SAIIPLR OrthoDB:EOG4MPMZ6 NextBio:967924 Genevestigator:Q00416
GermOnline:YLR430W Uniprot:Q00416
Length = 2231
Score = 425 (154.7 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 88/205 (42%), Positives = 128/205 (62%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LL VQYRMHP I FPS FYQGRL D + L +++ L PY FFD+I GR+
Sbjct: 1650 LLDVQYRMHPSISKFPSSEFYQGRLKDGPGMDILNKRPWHQLEPLAPYKFFDIISGRQEQ 1709
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTL--KSMGLGKVTVGIITPYKLQLKCLQHEFRNVL 119
++SY N++E + + L ++L + K GK+ GII+PY+ Q++ ++ EF
Sbjct: 1710 NAKTMSYTNMEEIRVAIELVDYLFRKFDNKIDFTGKI--GIISPYREQMQKMRKEFARYF 1767
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASN--HGVGFVADIRRMNVALTRARRALWV 177
K + NT+D FQGQE+++I++SCVRA + VGF+ D RRMNVALTRA+ ++WV
Sbjct: 1768 GGMINKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALTRAKTSIWV 1827
Query: 178 MGNAGALTQSDDWAALIADSKARNC 202
+G+ +L +S W LI D+K R+C
Sbjct: 1828 LGHQRSLAKSKLWRDLIEDAKDRSC 1852
>TAIR|locus:2130384 [details] [associations]
symbol:MAA3 "MAGATAMA 3" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009553 "embryo sac development"
evidence=IMP] [GO:0009875 "pollen-pistil interaction" evidence=IMP]
[GO:0010183 "pollen tube guidance" evidence=IMP] PROSITE:PS51198
GO:GO:0005524 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0004386 GO:GO:0009553 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:Z97339 GO:GO:0010183 EMBL:AL161542 EMBL:EU915246
IPI:IPI00522212 PIR:E71420 RefSeq:NP_193292.3 UniGene:At.33168
ProteinModelPortal:B6SFA4 SMR:B6SFA4 PaxDb:B6SFA4 PRIDE:B6SFA4
EnsemblPlants:AT4G15570.1 GeneID:827233 KEGG:ath:AT4G15570
GeneFarm:2417 TAIR:At4g15570 HOGENOM:HOG000030627 KO:K10706
OMA:TIMREFT PhylomeDB:B6SFA4 ProtClustDB:CLSN2680970
Genevestigator:B6SFA4 GO:GO:0009875 InterPro:IPR026852
PANTHER:PTHR10887:SF27 Uniprot:B6SFA4
Length = 818
Score = 386 (140.9 bits), Expect = 8.1e-35, P = 8.1e-35
Identities = 80/202 (39%), Positives = 119/202 (58%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRES- 60
+L QYRMHP IR FPS+ FY+G L D + ++K P+ FFD+ G+ES
Sbjct: 551 MLKTQYRMHPEIRSFPSKQFYEGALEDGSDIEAQTTRDWHKYRCFGPFCFFDIHEGKESQ 610
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
H G + S N+DE +F + +Y L + + II+PY Q+K + F+ +
Sbjct: 611 HPGATGSRVNLDEVEFVLLIYHRLVTMYPELKSSS-QLAIISPYNYQVKTFKDRFKEMFG 669
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMG 179
+E K + INTVD FQG+E+DV I SCVRA+ +G +GF+++ RRMNV +TRA+ ++ V+G
Sbjct: 670 TEAEKVVDINTVDGFQGREKDVAIFSCVRANENGQIGFLSNSRRMNVGITRAKSSVLVVG 729
Query: 180 NAGALTQSDDWAALIADSKARN 201
+A L W LI ++ RN
Sbjct: 730 SAATLKSDPLWKNLIESAEQRN 751
>POMBASE|SPAC6G9.10c [details] [associations]
symbol:sen1 "ATP-dependent 5' to 3' DNA/RNA helicase
Sen1" species:4896 "Schizosaccharomyces pombe" [GO:0005524 "ATP
binding" evidence=IC] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006364 "rRNA processing" evidence=ISO] [GO:0006369
"termination of RNA polymerase II transcription" evidence=ISO]
[GO:0008033 "tRNA processing" evidence=ISO] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IDA] [GO:0016180 "snRNA
processing" evidence=ISO] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IDA] [GO:0035649 "Nrd1 complex"
evidence=ISO] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IDA] [GO:0043144 "snoRNA processing"
evidence=ISO] InterPro:IPR024714 PomBase:SPAC6G9.10c GO:GO:0005524
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0006397
GO:GO:0008033 eggNOG:COG1112 GO:GO:0006364 GO:GO:0006369
GO:GO:0043144 GO:GO:0043141 GO:GO:0016180 KO:K10706 GO:GO:0035649
PIR:T39072 RefSeq:NP_594119.1 ProteinModelPortal:Q92355
EnsemblFungi:SPAC6G9.10c.1 GeneID:2541556 KEGG:spo:SPAC6G9.10c
OrthoDB:EOG4BCHWF NextBio:20802652 GO:GO:0032575 InterPro:IPR024481
PANTHER:PTHR10887:SF164 Pfam:PF12726 Uniprot:Q92355
Length = 1687
Score = 380 (138.8 bits), Expect = 1.4e-33, P = 1.4e-33
Identities = 83/205 (40%), Positives = 121/205 (59%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
LLS+QYRMHP I FPS+ FY RL D +++ +V++ +P Y FDV G+E
Sbjct: 1440 LLSIQYRMHPDISHFPSKKFYDSRLEDGDNMAEKTQQVWHVNPKFTQYRLFDV-RGKE-R 1497
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKVTVGIITPYKLQLKCLQHEFRNVLN 120
++S N++E ++ V + + L + G++ G+ITPY+ QL HE R
Sbjct: 1498 TSNTMSTYNLEEVEYLVNMVDELLNKFPDVNFTGRI--GVITPYRSQL----HELRRAFK 1551
Query: 121 SEEGKDLY----INTVDAFQGQERDVIIMSCVRA-SNHGVGFVADIRRMNVALTRARRAL 175
+ GK I TVD FQGQE+D+I SCV++ S HG+GF+ D RR+NVALTRAR +L
Sbjct: 1552 VKYGKSFMSTIDIQTVDGFQGQEKDIIFFSCVKSYSKHGIGFLRDFRRLNVALTRARSSL 1611
Query: 176 WVMGNAGALTQSDDWAALIADSKAR 200
++GN L D W +L+ D+ +R
Sbjct: 1612 LIIGNMETLKTDDLWGSLVDDALSR 1636
>TAIR|locus:2152627 [details] [associations]
symbol:AT5G37030 species:3702 "Arabidopsis thaliana"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] EMBL:CP002688 GO:GO:0004519 KO:K10706
IPI:IPI00540124 RefSeq:NP_198519.1 UniGene:At.55172
ProteinModelPortal:F4K5V7 SMR:F4K5V7 PRIDE:F4K5V7
EnsemblPlants:AT5G37030.1 GeneID:833673 KEGG:ath:AT5G37030
Uniprot:F4K5V7
Length = 638
Score = 363 (132.8 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 84/209 (40%), Positives = 128/209 (61%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVI-NLPDEVYYKDPVLRPYVFFDVIHGRES 60
LL VQYRMHP I FP + FY GR+ D+ +V ++ + + + + + F +V G+E
Sbjct: 416 LLDVQYRMHPSISRFPYKEFYGGRIKDAANVQESIYQKRFLQGNMFGSFSFINVGRGKEE 475
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
G S +N+ E + +L K + + K++VG+ITPYK Q++ +Q R+ +
Sbjct: 476 FGDGD-SPKNMVEVAVVSEIISNLFKVSRERKM-KMSVGVITPYKGQVRAIQERIRDKYS 533
Query: 121 SEEGKDLYIN--TVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWV 177
S G+ +N +VD FQG E D+II+S VR++++G VGF+++ +R NVALTRAR LWV
Sbjct: 534 SLSGELFTVNVRSVDGFQGGEEDIIIISTVRSNSNGKVGFLSNRQRANVALTRARHCLWV 593
Query: 178 MGNAGALTQSDD-WAALIADSKARNCYMD 205
+GN L +S WA LI+DSK R C+ D
Sbjct: 594 IGNESTLARSGSIWANLISDSKRRKCFYD 622
>TAIR|locus:2018561 [details] [associations]
symbol:AT1G65810 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0048451 "petal formation"
evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
EMBL:CP002684 GO:GO:0004386 KO:K10706 InterPro:IPR026852
PANTHER:PTHR10887:SF27 IPI:IPI01019905 RefSeq:NP_176757.1
UniGene:At.52388 ProteinModelPortal:F4IBK8 SMR:F4IBK8 PRIDE:F4IBK8
EnsemblPlants:AT1G65810.1 GeneID:842892 KEGG:ath:AT1G65810
OMA:DSEINKR ArrayExpress:F4IBK8 Uniprot:F4IBK8
Length = 1050
Score = 363 (132.8 bits), Expect = 4.2e-32, P = 4.2e-32
Identities = 77/205 (37%), Positives = 122/205 (59%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESV-INLPDEVYYKDPVLRPYVFFDVIHGRES 60
LL++QYRMHP I FP+R FY ++ D+ SV + ++ + + + PY F ++ +GRE
Sbjct: 621 LLNMQYRMHPSISIFPNREFYDMKILDAPSVRLRSYEKKFLPEKMYGPYSFINIAYGREQ 680
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
G S +N+ E + L + G ++VG+I+PYK Q+ +Q N
Sbjct: 681 F-GEGYSSKNLVEVSVVAEIVSKLYSVSRKTGR-TISVGVISPYKAQVFAIQERIGEKYN 738
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMG 179
+E + + +VD FQG E D+II+S VR++ +G +GF+++ +R NVALTRAR LW++G
Sbjct: 739 TEGTFTVSVRSVDGFQGGEEDIIIISTVRSNGNGAIGFLSNQQRTNVALTRARYCLWILG 798
Query: 180 NAGALTQSDD-WAALIADSKARNCY 203
N LT + W L+ D+KARNC+
Sbjct: 799 NEATLTNNRSVWRQLVDDAKARNCF 823
>DICTYBASE|DDB_G0274399 [details] [associations]
symbol:DDB_G0274399 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR003593 SMART:SM00382
dictyBase:DDB_G0274399 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000012 GO:GO:0004386 eggNOG:COG1112 RefSeq:XP_644230.1
ProteinModelPortal:Q86AS0 EnsemblProtists:DDB0237968 GeneID:8619659
KEGG:ddi:DDB_G0274399 OMA:LIMISLH Uniprot:Q86AS0
Length = 967
Score = 358 (131.1 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 84/198 (42%), Positives = 115/198 (58%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEV--YYKDPVLRPYVFFDVIHGRE 59
+L+ QYRMH IR FPSRHFYQ L D N+P Y+ +P P VF+D+ E
Sbjct: 651 MLTTQYRMHSLIRAFPSRHFYQDLLLDGP---NIPSRATHYHSNPFFGPLVFYDLSWSTE 707
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVL 119
+ GG S N E K + L++ K +GII+PY+ Q+ L+ F+N
Sbjct: 708 TKPGGG-SVFNEHECKMAMYLFQLFTKVYPDEDFAS-RIGIISPYRQQVLALREIFKNY- 764
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRA---SNHGVGFVADIRRMNVALTRARRALW 176
G + I+TVD FQG+ER++II SCVRA G+GF++D+RRMNVALTR R +L
Sbjct: 765 ---PG--ISIDTVDGFQGREREIIIFSCVRAPVEEGAGIGFLSDVRRMNVALTRPRSSLL 819
Query: 177 VMGNAGALTQSDDWAALI 194
++GN AL+ + DW LI
Sbjct: 820 ILGNTKALSINKDWNELI 837
>DICTYBASE|DDB_G0285243 [details] [associations]
symbol:DDB_G0285243 "putative splicing endonuclease"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0285243 EMBL:AAFI02000076 KO:K10706
InterPro:IPR024481 Pfam:PF12726 RefSeq:XP_002649136.1
ProteinModelPortal:C7G036 EnsemblProtists:DDB0252844 GeneID:8625002
KEGG:ddi:DDB_G0285243 OMA:DSINMIF Uniprot:C7G036
Length = 2069
Score = 362 (132.5 bits), Expect = 1.5e-31, P = 1.5e-31
Identities = 81/211 (38%), Positives = 118/211 (55%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR--PYVFFDVIHGRE 59
+L QYRMHP I FPS+ FY+G L D ++V + YY D R P VF+D+
Sbjct: 1674 VLKTQYRMHPMISKFPSKIFYRGELEDGKNVREYKQD-YYNDSASRFGPLVFYDLFDKHG 1732
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVL 119
R S +N E K + + L + + +G+ITPYK Q L + F+
Sbjct: 1733 EVRSSFFSLRNPTEVKLAKLIVDQLISNYPNTK--DLEIGVITPYKSQSVDLFNAFKGYQ 1790
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRA-SNHGVGFVADIRRMNVALTRARRALWVM 178
N E ++T+D FQG+E+D +I S VRA S H +GF++DIRRMNV LTRA+ ++ ++
Sbjct: 1791 NVE------VSTIDGFQGKEKDFVIFSSVRAHSGHSIGFLSDIRRMNVGLTRAKYSMVIL 1844
Query: 179 GNAGALTQSDDWAALIADSK-ARNCYMDMDS 208
GN+ L+ +DDW L+ D + NCY + S
Sbjct: 1845 GNSSLLSNNDDWGNLVNDLRQTNNCYFPISS 1875
>TAIR|locus:2173033 [details] [associations]
symbol:AT5G52090 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0004519 eggNOG:COG1112
EMBL:AB015478 KO:K10706 IPI:IPI00525648 RefSeq:NP_200022.1
UniGene:At.65668 ProteinModelPortal:Q9FJ83 SMR:Q9FJ83 PRIDE:Q9FJ83
EnsemblPlants:AT5G52090.1 GeneID:835285 KEGG:ath:AT5G52090
TAIR:At5g52090 HOGENOM:HOG000083772 InParanoid:Q9FJ83 OMA:TACEASE
PhylomeDB:Q9FJ83 ProtClustDB:CLSN2686886 Genevestigator:Q9FJ83
Uniprot:Q9FJ83
Length = 676
Score = 353 (129.3 bits), Expect = 1.7e-31, P = 1.7e-31
Identities = 82/209 (39%), Positives = 126/209 (60%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVI-NLPDEVYYKDPVLRPYVFFDVIHGRES 60
LL VQYRMHP I FP++ FY GR+ D+E+V ++ + + K + + F +V G+E
Sbjct: 432 LLDVQYRMHPSISRFPNKEFYGGRIKDAENVKESIYQKRFLKGNMFDSFSFINVGRGKEE 491
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
G S +N+ E + +L K + KV+VG+++PYK Q++ +Q + + +
Sbjct: 492 FGDGH-SPKNMVEVAVISEIISNLYKVSCERRM-KVSVGVVSPYKGQMRAIQEKIGDKYS 549
Query: 121 SEEGKDLYIN--TVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWV 177
S G+ +N +VD FQG E D+II+S VR++ +G VGF+ + +R NVALTRAR LWV
Sbjct: 550 SLSGQQFTLNVRSVDGFQGGEEDIIIISTVRSNGNGKVGFLNNRQRANVALTRARHCLWV 609
Query: 178 MGNAGALTQSDD-WAALIADSKARNCYMD 205
+GN L S WA LI++S+ R C+ D
Sbjct: 610 IGNETTLALSGSIWATLISESRTRGCFHD 638
>TAIR|locus:2166173 [details] [associations]
symbol:AT5G37150 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004386
KO:K10706 IPI:IPI01020555 RefSeq:NP_198531.2 UniGene:At.55176
ProteinModelPortal:F4K5W5 SMR:F4K5W5 PRIDE:F4K5W5
EnsemblPlants:AT5G37150.1 GeneID:833688 KEGG:ath:AT5G37150
OMA:RSVDEYY Uniprot:F4K5W5
Length = 839
Score = 350 (128.3 bits), Expect = 6.6e-31, P = 6.6e-31
Identities = 81/209 (38%), Positives = 127/209 (60%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVI-NLPDEVYYKDPVLRPYVFFDVIHGRES 60
LL VQYRMHP I FP++ FY GR+ D+E+V ++ + + + + + F +V G+E
Sbjct: 595 LLDVQYRMHPSISRFPNKEFYGGRIKDAENVKESIYQKRFLQGNMFGSFSFINVGRGKEE 654
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
G S +N+ E + +L K + KV+VG+++PYK Q++ +Q + + +
Sbjct: 655 FGDGH-SPKNMVEVAVVSEIISNLFKVSCERRM-KVSVGVVSPYKGQMRAIQEKIGDKYS 712
Query: 121 SEEGKDLYIN--TVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWV 177
S G+ +N +VD FQG E D+II+S VR++++G VGF+ + +R NVALTRAR LWV
Sbjct: 713 SLSGQQFALNVRSVDGFQGGEEDIIIISTVRSNSNGKVGFLNNRQRANVALTRARHCLWV 772
Query: 178 MGNAGALTQSDD-WAALIADSKARNCYMD 205
+GN L S WA LI++S+ R C+ D
Sbjct: 773 IGNETTLALSGSIWATLISESRTRGCFYD 801
>TAIR|locus:2166183 [details] [associations]
symbol:AT5G37160 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004519
KO:K10706 IPI:IPI00521499 RefSeq:NP_198532.1 UniGene:At.55177
ProteinModelPortal:F4K5W6 SMR:F4K5W6 PRIDE:F4K5W6
EnsemblPlants:AT5G37160.1 GeneID:833689 KEGG:ath:AT5G37160
OMA:WAELISE Uniprot:F4K5W6
Length = 871
Score = 345 (126.5 bits), Expect = 2.5e-30, P = 2.5e-30
Identities = 83/210 (39%), Positives = 127/210 (60%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVI-NLPDEVYYKDPVLRPYVFFDVIHGRES 60
LL+VQYRMHP I FP++ FY GR+TD+ +V ++ ++ + + + + F +V G+E
Sbjct: 628 LLNVQYRMHPSISRFPNKEFYGGRITDAANVQESIYEKRFLQGNMFGTFSFINVGRGKEE 687
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
G S +N+ E + +L K + S K++VG+I+PYK Q++ +Q + N
Sbjct: 688 FGDGH-SPKNMVEVAVISKIISNLFK-VSSQRKQKMSVGVISPYKGQVRAIQERVGDKYN 745
Query: 121 SEEGKDLY---INTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALW 176
S L+ + +VD FQG E DVII+S VR + +G VGF+++ +R NVALTRAR LW
Sbjct: 746 SLSVDQLFTLNVQSVDGFQGGEVDVIIISTVRCNVNGNVGFLSNRQRANVALTRARHCLW 805
Query: 177 VMGNAGALTQSDD-WAALIADSKARNCYMD 205
V+GN L S WA LI++S+ R C+ D
Sbjct: 806 VIGNGTTLALSGSIWAELISESRTRGCFYD 835
>TAIR|locus:2166163 [details] [associations]
symbol:AT5G37140 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004519
KO:K10706 IPI:IPI00534313 RefSeq:NP_198530.1 UniGene:At.55175
ProteinModelPortal:F4K5W4 SMR:F4K5W4 PRIDE:F4K5W4
EnsemblPlants:AT5G37140.1 GeneID:833686 KEGG:ath:AT5G37140
OMA:TEAKYEH ArrayExpress:F4K5W4 Uniprot:F4K5W4
Length = 692
Score = 334 (122.6 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 84/211 (39%), Positives = 124/211 (58%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVF--FDVIH-GR 58
LL+VQYRMHP I FP++ FY GR+ D+ N+ + +Y K L+ +F F I+ GR
Sbjct: 449 LLNVQYRMHPSISRFPNKEFYGGRIKDAA---NVQESIYQKR-FLQGNMFGSFSFINVGR 504
Query: 59 -ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
E G S +N+ E + +L K + K++VG+++PYK Q++ +Q N
Sbjct: 505 GEEEFGDGHSPKNMVEVAVISEIISNLFKVSSERRI-KMSVGVVSPYKGQVRAIQERTTN 563
Query: 118 VLNSEEGK-DLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRAL 175
+S G L + +VD FQG E D+II+S VR++ +G VGF+ + +R NVALTRAR L
Sbjct: 564 KYSSLSGLFTLNVRSVDGFQGGEEDIIIISTVRSNGNGKVGFLNNRQRANVALTRARHCL 623
Query: 176 WVMGNAGALTQS-DDWAALIADSKARNCYMD 205
WV+GN L S WA LI++S+ C+ D
Sbjct: 624 WVIGNETTLALSGSSWAKLISESRTLGCFYD 654
>UNIPROTKB|E1C4T7 [details] [associations]
symbol:Gga.18015 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654
GO:GO:0006302 GeneTree:ENSGT00580000081652 OMA:RLINHFE
PANTHER:PTHR10887:SF15 EMBL:AADN02026516 IPI:IPI00575045
Ensembl:ENSGALT00000005801 Uniprot:E1C4T7
Length = 2503
Score = 332 (121.9 bits), Expect = 3.0e-28, P = 3.0e-28
Identities = 87/230 (37%), Positives = 128/230 (55%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL-TDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
L+VQYRMHP I FPS + Y L TD + N + P +PY+ FDV G E
Sbjct: 2277 LTVQYRMHPDICLFPSSYIYDKTLKTDKATEENRCSSEW---P-FQPYLVFDVGDGHEER 2332
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVL-N 120
S+ N E K + + +++ K +GL ++ GIITPY Q K +Q E V N
Sbjct: 2333 --DKDSFSNPQEVKLVLEIIRTIKEKRKDLGLRRI--GIITPYSAQKKKIQEELDRVFKN 2388
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRA-SNHG-VGFVADIRRMNVALTRARRALWVM 178
+ G+ ++TVDAFQG+E+D II++CVRA S+ G +GF+A ++R+NV +TRAR +L+++
Sbjct: 2389 NSPGE---VDTVDAFQGREKDCIIVTCVRANSSKGSIGFLASLQRLNVTITRARFSLFIL 2445
Query: 179 GNAGALTQSDDWAALIADSKARNCYMDMD--SLPKEFSVALAAKAPGYGP 226
G L ++ DW LI D++ R + S K+ L K P P
Sbjct: 2446 GRLKTLMENKDWNKLIQDAQRRGAIIKTSDKSYKKDALKILKLKPPPQNP 2495
>DICTYBASE|DDB_G0288923 [details] [associations]
symbol:upf1 "regulator of nonsense transcripts 1"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;IC] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR018999 Pfam:PF09416 dictyBase:DDB_G0288923
GO:GO:0005524 GO:GO:0005737 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 EMBL:AAFI02000126
GenomeReviews:CM000154_GR GO:GO:0003676 eggNOG:COG1112
GO:GO:0004004 KO:K14326 RefSeq:XP_636490.1
ProteinModelPortal:Q54I89 SMR:Q54I89 STRING:Q54I89
EnsemblProtists:DDB0233746 GeneID:8626873 KEGG:ddi:DDB_G0288923
InParanoid:Q54I89 Uniprot:Q54I89
Length = 1331
Score = 327 (120.2 bits), Expect = 4.4e-28, P = 4.4e-28
Identities = 88/255 (34%), Positives = 134/255 (52%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
L++QYRMHP + +FPS Y+G+L S + + + P + +FF G E
Sbjct: 768 LTIQYRMHPSLTEFPSNTSYEGQLVSELSHTDRDSQSKFPWPQPKDPMFFFNCTGSEEIS 827
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV--LN 120
S+ N EA +C E + +G +GIITPY+ Q + + LN
Sbjct: 828 SSGTSFINTTEAS--IC--EKIVTKFLELGSLPGQIGIITPYEGQRAYITSHMQKSGKLN 883
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVMG 179
E K + + +VD+FQG+E+D II+SCVR++++ G+GF+ D RR+NVALTRAR L ++G
Sbjct: 884 LELYKSIEVASVDSFQGREKDYIILSCVRSNDYQGIGFLQDPRRLNVALTRARFGLIILG 943
Query: 180 NAGALTQSDDWAALIADSKARNCYMDMDSLP--KEFSVALAAKAPGYGPLQGKIPHNARG 237
NA L++ W +LI+ K +N ++ SL K+ V L YG QGK+P +
Sbjct: 944 NAKVLSKDPLWNSLISHFKNKNVLVE-GSLANLKQSPVILQKPKKLYG--QGKLPIPGQN 1000
Query: 238 LRSAGQRHRSFDMNM 252
S D N+
Sbjct: 1001 SNSFNYDREHIDPNI 1015
>TAIR|locus:2018536 [details] [associations]
symbol:AT1G65780 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002684 GO:GO:0004386
KO:K10706 InterPro:IPR026852 PANTHER:PTHR10887:SF27 IPI:IPI00534309
RefSeq:NP_176754.1 UniGene:At.52386 ProteinModelPortal:F4IBK4
SMR:F4IBK4 PRIDE:F4IBK4 EnsemblPlants:AT1G65780.1 GeneID:842889
KEGG:ath:AT1G65780 Uniprot:F4IBK4
Length = 1065
Score = 317 (116.6 bits), Expect = 3.6e-27, P = 3.6e-27
Identities = 80/233 (34%), Positives = 124/233 (53%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP-DEVYYKDPVLRPYVFFDVIHGRES 60
+L++QYRMH I FP++ Y ++ D+ +V + Y + PY F ++ +GRE
Sbjct: 632 MLNIQYRMHCSISSFPNKELYGKKILDAPTVRQRNYTKQYLPGEMYGPYSFINIAYGREE 691
Query: 61 H-RGGSVSYQN-VDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
+ G S +N V+ + LQ + K+ ++ VG+I+PYK Q+ +Q + +
Sbjct: 692 YGEGEGRSLKNNVEVVVVAAIIANLLQVSEKTKT--RINVGVISPYKAQVIAIQEKIQET 749
Query: 119 LNSEEGK--DLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRAL 175
+ G L I TVD FQG E D+II+S VR++ G VGF+ + RR NV LTRAR L
Sbjct: 750 SIGDAGGLFSLRIRTVDGFQGGEEDIIIVSTVRSNGVGRVGFLGNRRRTNVLLTRARFCL 809
Query: 176 WVMGNAGALTQSDD-WAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPL 227
W++GN L S W LI D+K R C+ + + A+A+ + PL
Sbjct: 810 WILGNEATLMNSKSVWRNLIQDAKERGCFHSAGE-DESLAQAIASTNIEFRPL 861
>ASPGD|ASPL0000056713 [details] [associations]
symbol:AN0646 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001308 GO:GO:0003677
GO:GO:0008270 GO:GO:0016567 GO:GO:0030466 GO:GO:0004386
GO:GO:0008298 InterPro:IPR014001 SMART:SM00487 GO:GO:0070478
HOGENOM:HOG000205990 OMA:MFYEGSL ProteinModelPortal:C8VS08
EnsemblFungi:CADANIAT00002030 Uniprot:C8VS08
Length = 1077
Score = 317 (116.6 bits), Expect = 3.7e-27, P = 3.7e-27
Identities = 84/240 (35%), Positives = 132/240 (55%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDS-ESVINLPDEVYYKDPVL-RPYVFFDVIHGRES 60
L+VQYRMHP + +FPS FY+G L + S L EV + P+L P +F+ + G E
Sbjct: 651 LNVQYRMHPCLSEFPSNMFYEGSLQNGITSFDRLRREVDFPWPILDSPMMFWSNL-GNEE 709
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR--NV 118
SY N EA V E + G+ +GIITPY+ Q + +
Sbjct: 710 ISASGTSYLNRTEAA-NV---EKIVTRFFKAGVQPKDIGIITPYEGQRSYIVSSMQATGT 765
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWV 177
E K++ + +VDAFQG+E+D II+SCVR+++H G+GF++D RR+NVALTRA+ L +
Sbjct: 766 FKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVI 825
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMD--MDSLPKEFSVALAAKAPGY-GPLQGKIPHN 234
+GN L++ W L+ K R+ ++ + +L +E + + Y GP + ++ +N
Sbjct: 826 LGNPKVLSKHPLWNCLLQHFKERHTLVEGPLSNL-QESLIQFSRPKQAYRGPQRFQMAYN 884
>TAIR|locus:2171007 [details] [associations]
symbol:LBA1 "LOW-LEVEL BETA-AMYLASE 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA;IMP] [GO:0016246 "RNA interference" evidence=IGI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IMP] [GO:0005829 "cytosol" evidence=IDA;RCA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0009755 "hormone-mediated
signaling pathway" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=IDA] [GO:0009744 "response to sucrose stimulus"
evidence=IGI] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005829
GO:GO:0005886 GO:GO:0009506 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0016246 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0009744 GO:GO:0008270 GO:GO:0010182
GO:GO:0004386 GO:GO:0000932 eggNOG:COG1112 InterPro:IPR014001
PROSITE:PS51192 EMBL:AB013394 HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL EMBL:AF484122 IPI:IPI00541997 RefSeq:NP_199512.2
UniGene:At.8584 ProteinModelPortal:Q9FJR0 SMR:Q9FJR0 STRING:Q9FJR0
PaxDb:Q9FJR0 PRIDE:Q9FJR0 EnsemblPlants:AT5G47010.1 GeneID:834747
KEGG:ath:AT5G47010 GeneFarm:2422 TAIR:At5g47010 InParanoid:Q9FJR0
PhylomeDB:Q9FJR0 ProtClustDB:CLSN2680462 Genevestigator:Q9FJR0
GermOnline:AT5G47010 Uniprot:Q9FJR0
Length = 1254
Score = 317 (116.6 bits), Expect = 4.7e-27, P = 4.7e-27
Identities = 99/285 (34%), Positives = 147/285 (51%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDE-VYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + ++I + + PV +FF V G+E
Sbjct: 718 LQVQYRMHPALSEFPSNSFYEGTLQNGVTIIERQTTGIDFPWPVPNRPMFFYVQLGQEEI 777
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL-QHEFRN-VL 119
SY N EA V E L G+ +G+ITPY+ Q + + RN L
Sbjct: 778 SASGTSYLNRTEAA-NV---EKLVTAFLKSGVVPSQIGVITPYEGQRAYIVNYMARNGSL 833
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+ K++ + +VD+FQG+E+D II+SCVR++ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 834 RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVIL 893
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD--MDSLPKEFSVALAAKAPGYGPLQGKIPHNAR 236
GN L++ W L+ K C ++ +++L K+ V + P KI +N R
Sbjct: 894 GNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNL-KQSMVQF--QKPR------KI-YNDR 943
Query: 237 GLRSAGQRHRSFDMNMESRSGTPSEDDEKVSRN---GNYRPFKPP 278
L G + N S G P+ D + SR G+Y P PP
Sbjct: 944 RLFYGGGAGMIGNDNFGS--GNPNAD-RRGSRGRAGGSYLPSGPP 985
>UNIPROTKB|G4ND47 [details] [associations]
symbol:MGG_00976 "Regulator-nonsense transcripts 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR018999 Pfam:PF09416
GO:GO:0005524 GO:GO:0005737 EMBL:CM001235 GO:GO:0003677
GO:GO:0008270 GO:GO:0016567 GO:GO:0030466 GO:GO:0004386
GO:GO:0008298 InterPro:IPR014001 SMART:SM00487 GO:GO:0070478
KO:K14326 RefSeq:XP_003717973.1 ProteinModelPortal:G4ND47
SMR:G4ND47 EnsemblFungi:MGG_00976T0 GeneID:2674784
KEGG:mgr:MGG_00976 Uniprot:G4ND47
Length = 1105
Score = 313 (115.2 bits), Expect = 1.0e-26, P = 1.0e-26
Identities = 85/263 (32%), Positives = 136/263 (51%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVL-RPYVFFDVIHGRES 60
L+VQYRMHP + +FPS FY+G L + ++ L +V + PV P +F+ + G E
Sbjct: 679 LNVQYRMHPCLSEFPSNMFYEGSLQNGVTIQQRLRRDVDFPWPVADMPMMFWSNL-GNEE 737
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV-- 118
SY N EA V E L G+ +G++TPY+ Q + +N
Sbjct: 738 ISASGTSYLNRTEAS-NV---EKLVTRFFKAGVKPGDIGVVTPYEGQRSYIVSTMQNTGT 793
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRARRALWV 177
E K++ + +VDAFQG+E+D I++SCVR++ + G+GF++D RR+NVALTRA+ + +
Sbjct: 794 FKKESYKEVEVASVDAFQGREKDFIVLSCVRSNESQGIGFLSDPRRLNVALTRAKYGVVI 853
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMD--MDSLPKEFSVALAAKAPGYGPLQGKIPHNA 235
+GN L++ + W L+ + R C +D + +L K P + P + H+
Sbjct: 854 IGNPKVLSKHELWHHLLIHFRDRKCLVDGPLTNLQASLLQFSKPKTP-FRPARFSQQHSQ 912
Query: 236 RGLRSAGQRHRSFD-MNMESRSG 257
AG + F N+ SG
Sbjct: 913 YAPSQAGYANGRFPGSNLNGGSG 935
>CGD|CAL0003666 [details] [associations]
symbol:NAM7 species:5476 "Candida albicans" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0070478 "nuclear-transcribed mRNA catabolic
process, 3'-5' exonucleolytic nonsense-mediated decay"
evidence=IEA] [GO:0008298 "intracellular mRNA localization"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
CGD:CAL0003666 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0008270 GO:GO:0004386 eggNOG:COG1112
InterPro:IPR014001 SMART:SM00487 EMBL:AACQ01000063
EMBL:AACQ01000062 KO:K14326 RefSeq:XP_716778.1 RefSeq:XP_716838.1
ProteinModelPortal:Q5A507 SMR:Q5A507 STRING:Q5A507 GeneID:3641489
GeneID:3641540 KEGG:cal:CaO19.8554 KEGG:cal:CaO19.939
Uniprot:Q5A507
Length = 1019
Score = 309 (113.8 bits), Expect = 2.4e-26, P = 2.4e-26
Identities = 83/217 (38%), Positives = 127/217 (58%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDS-ESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + S L +E + PV+ + F +GRE
Sbjct: 667 LEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEESTFPWPVIDTPMMFWANYGREEL 726
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
SY N EA + + + + K K G+ +G+ITPY+ Q L +F +V NS
Sbjct: 727 SASGNSYLNRVEA---MNVEKIITKLFKD-GIKPEQIGVITPYEGQRAYLV-QFMSV-NS 780
Query: 122 E--EGKDLYIN----TVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRA 174
+ +D Y+N +VDAFQG+E+D II+SCVRA++ +GF++D RR+NVALTRA+
Sbjct: 781 TLLDKRDQYLNVEITSVDAFQGREKDFIILSCVRANDSQSIGFLSDPRRLNVALTRAKYG 840
Query: 175 LWVMGNAGALTQSDDWAALIADSKARNCYMD--MDSL 209
L ++GN +L ++ W L+ + + C +D +D+L
Sbjct: 841 LVILGNPRSLCRNRLWNHLLIHFREKGCLVDGPLDNL 877
>UNIPROTKB|Q5A507 [details] [associations]
symbol:NAM7 "Putative uncharacterized protein NAM7"
species:237561 "Candida albicans SC5314" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS] InterPro:IPR003593 InterPro:IPR018999
Pfam:PF09416 SMART:SM00382 CGD:CAL0003666 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487
EMBL:AACQ01000063 EMBL:AACQ01000062 KO:K14326 RefSeq:XP_716778.1
RefSeq:XP_716838.1 ProteinModelPortal:Q5A507 SMR:Q5A507
STRING:Q5A507 GeneID:3641489 GeneID:3641540 KEGG:cal:CaO19.8554
KEGG:cal:CaO19.939 Uniprot:Q5A507
Length = 1019
Score = 309 (113.8 bits), Expect = 2.4e-26, P = 2.4e-26
Identities = 83/217 (38%), Positives = 127/217 (58%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDS-ESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + +FPS FY+G L + S L +E + PV+ + F +GRE
Sbjct: 667 LEVQYRMHPCLSEFPSNMFYEGSLQNGVTSDDRLIEESTFPWPVIDTPMMFWANYGREEL 726
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
SY N EA + + + + K K G+ +G+ITPY+ Q L +F +V NS
Sbjct: 727 SASGNSYLNRVEA---MNVEKIITKLFKD-GIKPEQIGVITPYEGQRAYLV-QFMSV-NS 780
Query: 122 E--EGKDLYIN----TVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRA 174
+ +D Y+N +VDAFQG+E+D II+SCVRA++ +GF++D RR+NVALTRA+
Sbjct: 781 TLLDKRDQYLNVEITSVDAFQGREKDFIILSCVRANDSQSIGFLSDPRRLNVALTRAKYG 840
Query: 175 LWVMGNAGALTQSDDWAALIADSKARNCYMD--MDSL 209
L ++GN +L ++ W L+ + + C +D +D+L
Sbjct: 841 LVILGNPRSLCRNRLWNHLLIHFREKGCLVDGPLDNL 877
>MGI|MGI:107995 [details] [associations]
symbol:Upf1 "UPF1 regulator of nonsense transcripts homolog
(yeast)" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=ISO]
[GO:0000785 "chromatin" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006260 "DNA replication" evidence=ISO]
[GO:0006281 "DNA repair" evidence=ISO] [GO:0006449 "regulation of
translational termination" evidence=ISO] [GO:0007049 "cell cycle"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009048 "dosage compensation by inactivation of X chromosome"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=ISO] [GO:0044530
"supraspliceosomal complex" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0071044 "histone mRNA catabolic process"
evidence=ISO] InterPro:IPR018999 Pfam:PF09416 MGI:MGI:107995
GO:GO:0005524 GO:GO:0000184 GO:GO:0046872 GO:GO:0003677
GO:GO:0006260 GO:GO:0008270 GO:GO:0006281 GO:GO:0000785
GO:GO:0003682 GO:GO:0003723 GO:GO:0007049 GO:GO:0000932
eggNOG:COG1112 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GO:GO:0006449 GeneTree:ENSGT00550000074391
HOGENOM:HOG000205990 KO:K14326 OMA:MFYEGSL CTD:5976
HOVERGEN:HBG061556 ChiTaRS:UPF1 EMBL:AF322655 EMBL:AY597039
EMBL:AY597038 EMBL:AK148196 EMBL:BC030916 EMBL:BC052149
EMBL:BC056442 EMBL:AF182947 IPI:IPI00420949 IPI:IPI00850525
RefSeq:NP_001116301.1 RefSeq:NP_109605.2 UniGene:Mm.390048
ProteinModelPortal:Q9EPU0 SMR:Q9EPU0 STRING:Q9EPU0
PhosphoSite:Q9EPU0 PaxDb:Q9EPU0 PRIDE:Q9EPU0
Ensembl:ENSMUST00000075666 GeneID:19704 KEGG:mmu:19704
UCSC:uc009mab.2 UCSC:uc012gfa.1 InParanoid:Q9EPU0 OrthoDB:EOG4P8FH8
NextBio:297078 Bgee:Q9EPU0 Genevestigator:Q9EPU0
GermOnline:ENSMUSG00000058301 Uniprot:Q9EPU0
Length = 1124
Score = 306 (112.8 bits), Expect = 5.9e-26, P = 5.9e-26
Identities = 79/207 (38%), Positives = 119/207 (57%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 704 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 763
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL-QH-EFRNVL 119
SY N EA V E + L G +GIITPY+ Q L Q+ +F L
Sbjct: 764 ASSGTSYLNRTEAA-NV---EKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 819
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 820 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 879
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD 205
GN AL++ W L++ K + ++
Sbjct: 880 GNPKALSKQPLWNHLLSYYKEQKALVE 906
>DICTYBASE|DDB_G0268924 [details] [associations]
symbol:DDB_G0268924 "Helicase SEN1" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268924
GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0017111 eggNOG:COG1112
ProtClustDB:CLSZ2429765 RefSeq:XP_646844.2
ProteinModelPortal:Q55F26 EnsemblProtists:DDB0202279 GeneID:8616527
KEGG:ddi:DDB_G0268924 InParanoid:Q55F26 Uniprot:Q55F26
Length = 1772
Score = 308 (113.5 bits), Expect = 6.9e-26, P = 6.9e-26
Identities = 96/269 (35%), Positives = 133/269 (49%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP--DEVYYKDPVLRPYVFFDVIHGRE 59
+L VQYRMHP I FPS FY+ RL D ++V +L ++ D P F+DVI +E
Sbjct: 1446 MLHVQYRMHPTISRFPSNQFYRDRLLDGDNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKE 1505
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL--QH-EFR 116
G S +N E L + L + K + GIITPYKLQ + QH +F
Sbjct: 1506 E--SGKRSLKNKLEITMVFTLIKKLVQDYPECK--KFSFGIITPYKLQKSEIKEQHKQFN 1561
Query: 117 NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALW 176
LN E +T+D FQG E+D+II+SCVR+ +GF++D RR+NVALTRA+ L+
Sbjct: 1562 YPLNIET------STIDGFQGSEKDIIILSCVRSER--IGFLSDRRRINVALTRAKFGLF 1613
Query: 177 VMGNAGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNAR 236
V+GN+ L + W + N + +DS K SV L + Y L N
Sbjct: 1614 VIGNSKLLKKDRTWGPFCQYVHSINSMVSIDS--KGISV-LEQQIQEYDYL------NPN 1664
Query: 237 GL-RSAGQRHRSFDMNMESRSGTPSEDDE 264
GL + +D E EDD+
Sbjct: 1665 GLIQPHSDSEDEYDDEDEDEDEDEDEDDD 1693
>ZFIN|ZDB-GENE-040426-2836 [details] [associations]
symbol:upf1 "upf1 regulator of nonsense
transcripts homolog (yeast)" species:7955 "Danio rerio" [GO:0003677
"DNA binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA;IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009790 "embryo
development" evidence=IMP] InterPro:IPR018999 Pfam:PF09416
ZFIN:ZDB-GENE-040426-2836 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0008270 GO:GO:0009790 GO:GO:0004386
HOGENOM:HOG000205990 KO:K14326 CTD:5976 HOVERGEN:HBG061556
EMBL:BC045353 EMBL:FM986817 IPI:IPI00491565 RefSeq:NP_998639.1
UniGene:Dr.96025 SMR:Q7ZVZ4 STRING:Q7ZVZ4 GeneID:406783
KEGG:dre:406783 NextBio:20818296 Uniprot:Q7ZVZ4
Length = 1100
Score = 303 (111.7 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 79/196 (40%), Positives = 113/196 (57%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + L ++ P +FF V G+E
Sbjct: 678 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRLKKGFDFQWPQPDKPMFFYVTQGQEEI 737
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL-QH-EFRNVL 119
SY N EA V E + L G +GIITPY+ Q L Q+ +F L
Sbjct: 738 ASSGTSYLNRTEAA-NV---EKITTRLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 793
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 794 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 853
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 854 GNPKALSKQPLWNHLL 869
>UNIPROTKB|E1C0J4 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0003677 GO:GO:0008270 GO:GO:0004386
GeneTree:ENSGT00550000074391 EMBL:AADN02071779 IPI:IPI00598917
Ensembl:ENSGALT00000005099 NextBio:20823079 ArrayExpress:E1C0J4
Uniprot:E1C0J4
Length = 1117
Score = 303 (111.7 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 78/196 (39%), Positives = 114/196 (58%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 697 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 756
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL-QH-EFRNVL 119
SY N EA V E + L G +GIITPY+ Q L Q+ +F L
Sbjct: 757 ASSGTSYLNRTEAA-NV---EKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 812
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 813 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 872
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 873 GNPKALSKQPLWNHLL 888
>UNIPROTKB|E1BEK9 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071044 "histone mRNA catabolic process" evidence=IEA]
[GO:0044530 "supraspliceosomal complex" evidence=IEA] [GO:0035145
"exon-exon junction complex" evidence=IEA] [GO:0009048 "dosage
compensation by inactivation of X chromosome" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] InterPro:IPR018999
Pfam:PF09416 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
GO:GO:0000785 GO:GO:0003682 GO:GO:0007049 GO:GO:0071044
GO:GO:0009048 GO:GO:0004004 GO:GO:0035145
GeneTree:ENSGT00550000074391 OMA:MFYEGSL EMBL:DAAA02019036
IPI:IPI00685259 Ensembl:ENSBTAT00000027868 Uniprot:E1BEK9
Length = 1127
Score = 303 (111.7 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 78/196 (39%), Positives = 114/196 (58%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 707 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 766
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL-QH-EFRNVL 119
SY N EA V E + L G +GIITPY+ Q L Q+ +F L
Sbjct: 767 ASSGTSYLNRTEAA-NV---EKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 822
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 823 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 882
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 883 GNPKALSKQPLWNHLL 898
>UNIPROTKB|E1C0J3 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000785 "chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0035145 "exon-exon
junction complex" evidence=IEA] [GO:0044530 "supraspliceosomal
complex" evidence=IEA] [GO:0071044 "histone mRNA catabolic process"
evidence=IEA] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0006260
GO:GO:0008270 GO:GO:0006281 GO:GO:0000785 GO:GO:0003682
GO:GO:0007049 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GeneTree:ENSGT00550000074391 OMA:MFYEGSL
EMBL:AADN02071779 IPI:IPI00571950 Ensembl:ENSGALT00000005101
ArrayExpress:E1C0J3 Uniprot:E1C0J3
Length = 1128
Score = 303 (111.7 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 78/196 (39%), Positives = 114/196 (58%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 708 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 767
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL-QH-EFRNVL 119
SY N EA V E + L G +GIITPY+ Q L Q+ +F L
Sbjct: 768 ASSGTSYLNRTEAA-NV---EKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 823
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 824 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 883
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 884 GNPKALSKQPLWNHLL 899
>UNIPROTKB|Q92900 [details] [associations]
symbol:UPF1 "Regulator of nonsense transcripts 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000184 "nuclear-transcribed
mRNA catabolic process, nonsense-mediated decay"
evidence=IDA;NAS;IMP;TAS] [GO:0006449 "regulation of translational
termination" evidence=IMP;NAS] [GO:0004386 "helicase activity"
evidence=NAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0003723 "RNA binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=NAS] [GO:0071044 "histone mRNA catabolic
process" evidence=IMP] [GO:0035145 "exon-exon junction complex"
evidence=IDA] [GO:0044530 "supraspliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0006260 "DNA replication" evidence=IMP] [GO:0006281 "DNA
repair" evidence=IDA] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0007049 "cell cycle" evidence=IMP] [GO:0005829
"cytosol" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA
metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 InterPro:IPR018999 Pfam:PF09416 GO:GO:0005829
GO:GO:0005524 GO:GO:0010467 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
GO:GO:0000785 GO:GO:0003682 GO:GO:0003723 GO:GO:0007049
GO:GO:0006406 GO:GO:0000932 eggNOG:COG1112 GO:GO:0071044
GO:GO:0009048 GO:GO:0004004 GO:GO:0035145 EMBL:AC003972
GO:GO:0044530 GO:GO:0006449 HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL CTD:5976 EMBL:U65533 EMBL:U59323 EMBL:D86988
EMBL:AF074016 EMBL:BC039817 IPI:IPI00034049 IPI:IPI00399170
RefSeq:NP_002902.2 UniGene:Hs.515266 PDB:2GJK PDB:2GK6 PDB:2GK7
PDB:2IYK PDB:2WJV PDB:2WJY PDB:2XZO PDB:2XZP PDBsum:2GJK
PDBsum:2GK6 PDBsum:2GK7 PDBsum:2IYK PDBsum:2WJV PDBsum:2WJY
PDBsum:2XZO PDBsum:2XZP ProteinModelPortal:Q92900 SMR:Q92900
DIP:DIP-29875N IntAct:Q92900 MINT:MINT-5005507 STRING:Q92900
PhosphoSite:Q92900 DMDM:17380291 PaxDb:Q92900 PRIDE:Q92900
Ensembl:ENST00000262803 GeneID:5976 KEGG:hsa:5976 UCSC:uc002nkf.3
UCSC:uc002nkg.3 GeneCards:GC19P018942 HGNC:HGNC:9962 HPA:HPA019587
HPA:HPA020857 MIM:601430 neXtProt:NX_Q92900 PharmGKB:PA34328
HOVERGEN:HBG061556 InParanoid:Q92900 ChiTaRS:UPF1
EvolutionaryTrace:Q92900 GenomeRNAi:5976 NextBio:23259
ArrayExpress:Q92900 Bgee:Q92900 CleanEx:HS_UPF1
Genevestigator:Q92900 GermOnline:ENSG00000005007 Uniprot:Q92900
Length = 1129
Score = 303 (111.7 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 78/196 (39%), Positives = 114/196 (58%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 709 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 768
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL-QH-EFRNVL 119
SY N EA V E + L G +GIITPY+ Q L Q+ +F L
Sbjct: 769 ASSGTSYLNRTEAA-NV---EKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 824
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 825 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 884
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 885 GNPKALSKQPLWNHLL 900
>UNIPROTKB|E2RL81 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 GeneTree:ENSGT00550000074391 OMA:MFYEGSL
EMBL:AAEX03012279 Ensembl:ENSCAFT00000023180 Uniprot:E2RL81
Length = 1130
Score = 303 (111.7 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 78/196 (39%), Positives = 114/196 (58%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVY-YKDPVLRPYVFFDVIHGRESH 61
L VQYRMHP + FPS FY+G L + + + + + ++ P +FF V G+E
Sbjct: 710 LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEI 769
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL-QH-EFRNVL 119
SY N EA V E + L G +GIITPY+ Q L Q+ +F L
Sbjct: 770 ASSGTSYLNRTEAA-NV---EKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSL 825
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVM 178
+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NVALTRAR + ++
Sbjct: 826 HTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIV 885
Query: 179 GNAGALTQSDDWAALI 194
GN AL++ W L+
Sbjct: 886 GNPKALSKQPLWNHLL 901
>ZFIN|ZDB-GENE-070402-1 [details] [associations]
symbol:setx "senataxin" species:7955 "Danio rerio"
[GO:0006302 "double-strand break repair" evidence=IEA]
InterPro:IPR026121 ZFIN:ZDB-GENE-070402-1 GO:GO:0006302
InterPro:IPR024481 Pfam:PF12726 GeneTree:ENSGT00580000081652
PANTHER:PTHR10887:SF15 EMBL:CU927918 IPI:IPI00481119
Ensembl:ENSDART00000082314 Ensembl:ENSDART00000149777
Uniprot:E7FBJ2
Length = 2368
Score = 305 (112.4 bits), Expect = 2.1e-25, P = 2.1e-25
Identities = 85/220 (38%), Positives = 121/220 (55%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRL-TDSESVINLPDEVYYKDPVLRPYVFFDVIHGRE 59
+LLS+QYRMHP I +FPS++ Y L D E+ P +PY FDV+ GRE
Sbjct: 2028 LLLSMQYRMHPDICEFPSKYIYNSALKNDCETA---QKRCSLSWP-FKPYKVFDVMDGRE 2083
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTL-KSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
+ S + N E V L L K L K V VG+ITPY Q +H +
Sbjct: 2084 TKERDS--FINHKE----VSLVGLLLKLLCKEQA---VRVGVITPYNAQ----KHRILDA 2130
Query: 119 LNSEE-GKDLYI--NTVDAFQGQERDVIIMSCVRASNH--GVGFVADIRRMNVALTRARR 173
+ + K L + +TVD FQG+E D II+SCVRAS+ +GFV + +RMNV +TRA+
Sbjct: 2131 IKTSGINKQLQVEVDTVDGFQGREMDCIIVSCVRASSEMGSIGFVGNRQRMNVTITRAKF 2190
Query: 174 ALWVMGNAGALTQSDDWAALIADSKARNCYMDMDSLPKEF 213
+L+++G+ L + DW ALI D+ R C ++ ++ K F
Sbjct: 2191 SLFILGHLRTLREQSDWGALIEDAGRRECIIN--TMQKNF 2228
>FB|FBgn0030354 [details] [associations]
symbol:Upf1 "Upf1" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS;IMP;NAS] [GO:0005737 "cytoplasm"
evidence=IEA;NAS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0035195 "gene silencing by miRNA" evidence=IMP] [GO:0071456
"cellular response to hypoxia" evidence=IMP] [GO:0035145 "exon-exon
junction complex" evidence=IDA] InterPro:IPR018999 Pfam:PF09416
GO:GO:0005524 GO:GO:0005737 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 EMBL:AE014298 GO:GO:0008270 GO:GO:0071456
GO:GO:0004386 eggNOG:COG1112 GeneTree:ENSGT00550000074391 KO:K14326
OMA:MFYEGSL EMBL:AY061379 RefSeq:NP_572767.1 UniGene:Dm.3617
ProteinModelPortal:Q9VYS3 SMR:Q9VYS3 STRING:Q9VYS3 PaxDb:Q9VYS3
PRIDE:Q9VYS3 EnsemblMetazoa:FBtr0073596 GeneID:32153
KEGG:dme:Dmel_CG1559 UCSC:CG1559-RA CTD:5976 FlyBase:FBgn0030354
InParanoid:Q9VYS3 OrthoDB:EOG476HF1 PhylomeDB:Q9VYS3
GenomeRNAi:32153 NextBio:777131 Bgee:Q9VYS3 GermOnline:CG1559
Uniprot:Q9VYS3
Length = 1180
Score = 301 (111.0 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 76/206 (36%), Positives = 115/206 (55%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
L VQYRMHP + FPS FY+G L + + ++ + P +FF V G+E
Sbjct: 679 LEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPERPMFFLVTQGQEEIA 738
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL-QH-EFRNVLN 120
G S+ N EA V E + G+ +GIITPY+ Q L Q+ +++ L+
Sbjct: 739 GSGTSFLNRTEAA-NV---EKITTRFLKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLH 794
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWVMG 179
S +++ I +VDAFQG+E+D+IIMSCVR++ G+GF+ D RR+NVALTRA+ + ++G
Sbjct: 795 SRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKFGIIIVG 854
Query: 180 NAGALTQSDDWAALIADSKARNCYMD 205
N L + W L+ K R ++
Sbjct: 855 NPKVLAKQQLWNHLLNFYKDRKVLVE 880
>POMBASE|SPAC16C9.06c [details] [associations]
symbol:upf1 "ATP-dependent RNA helicase Upf1"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0002184 "cytoplasmic translational
termination" evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006415
"translational termination" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR018999
Pfam:PF09416 SMART:SM00382 PomBase:SPAC16C9.06c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0004004 GO:GO:0002184 HOGENOM:HOG000205990
KO:K14326 OMA:MFYEGSL OrthoDB:EOG405W86 PIR:S62476
RefSeq:NP_593080.1 ProteinModelPortal:Q09820 SMR:Q09820
STRING:Q09820 PRIDE:Q09820 EnsemblFungi:SPAC16C9.06c.1
GeneID:2542327 KEGG:spo:SPAC16C9.06c NextBio:20803388
Uniprot:Q09820
Length = 925
Score = 297 (109.6 bits), Expect = 3.9e-25, P = 3.9e-25
Identities = 101/304 (33%), Positives = 145/304 (47%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL----TDSESVINLPDEVYYKDPVLRPYVFFDVIHGR 58
L VQYRMHP + +FPS FY+G L T SE + D + + P +F+ G+
Sbjct: 626 LVVQYRMHPCLSEFPSNTFYEGTLQNGVTTSERIARHVDFPWIQPD--SPLMFY-ANFGQ 682
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E S+ N EA C E + T + +GI+TPY Q + +N
Sbjct: 683 EELSASGTSFLNRTEAS--TC--EKIVTTFLRSNVLPEQIGIVTPYDGQRSYIVQYMQN- 737
Query: 119 LNSEEGKDLY----INTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARR 173
N KDLY + +VDAFQG+E+D II+SCVR+S H G+GFV D RR+NVALTRA+
Sbjct: 738 -NGSMQKDLYKAVEVASVDAFQGREKDFIILSCVRSSEHQGIGFVNDPRRLNVALTRAKY 796
Query: 174 ALWVMGNAGALTQSDDWAALIADSKARNCYMD--MDSLPKEFSVALAAKAPGYGPLQGKI 231
+ V+GN L + W + K + ++ ++SL K FS+ L P P + K
Sbjct: 797 GVIVLGNPKVLAKHALWYHFVLHCKEKGYLVEGTLNSLQK-FSLTLT---PPQKPQKFKR 852
Query: 232 PHNARGLRSAGQRHRSFDMNMESRSGTPSEDDEKVSRNGN-YRPFKPPLENSLD--DF-D 287
N + RS + + S S P+ N + +K N+ D DF
Sbjct: 853 DLNVQ--RSLSPIQNAGSAMLPSFSNLPNLYSSSYLEEWNVFAQYKRRESNATDFEDFRS 910
Query: 288 QSGE 291
Q G+
Sbjct: 911 QVGD 914
>DICTYBASE|DDB_G0268660 [details] [associations]
symbol:DDB_G0268660 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268660
Pfam:PF03828 GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0004386
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 InterPro:IPR002058
ProtClustDB:CLSZ2429765 RefSeq:XP_646847.2
ProteinModelPortal:Q55F23 EnsemblProtists:DDB0304625 GeneID:8616530
KEGG:ddi:DDB_G0268660 InParanoid:Q55F23 Uniprot:Q55F23
Length = 2314
Score = 301 (111.0 bits), Expect = 5.4e-25, P = 5.4e-25
Identities = 96/299 (32%), Positives = 147/299 (49%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP--DEVYYKDPVLRPYVFFDVIHGRE 59
+L+ QYRMHP I FPS FY+ RL D ++V +L ++ D P F+DVI +E
Sbjct: 1598 MLNTQYRMHPTISRFPSNQFYKDRLLDGDNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKE 1657
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL--QH-EFR 116
G S +N E L + L + K + GIITPYKLQ + QH +F
Sbjct: 1658 E--SGKRSLKNKLEITMVFTLIKKLVQDYPECK--KFSFGIITPYKLQKSEIKEQHKQFN 1713
Query: 117 NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALW 176
LN E +T+D QG E+D+II+SCVR+ +GF++D RR+NVALTRA+ L+
Sbjct: 1714 YPLNIET------STIDGVQGSEKDIIILSCVRSER--IGFLSDRRRINVALTRAKFGLF 1765
Query: 177 VMGNAGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQ--GKIPHN 234
V+GN+ L + W + N + +DS K SV L + Y L G I +
Sbjct: 1766 VIGNSKLLKKDRTWGPFCQYVHSINSMVSIDS--KGISV-LEQQIQEYDSLNPNGLIEFH 1822
Query: 235 ARGLRSAGQRHRSFDMNMESRSGTPSEDDEKVSRNGNYRPFKPPLENSLDDFDQSGEKY 293
+ + D + ++ ++D++ +R + E++ DD D ++Y
Sbjct: 1823 SDSEDEYDGKDEEEDEDEDNEEIQEHDEDDESNR---IKKINQEGEDN-DDLDDDDDEY 1877
>DICTYBASE|DDB_G0268662 [details] [associations]
symbol:DDB_G0268662 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268662
Pfam:PF03828 GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0004386
eggNOG:COG1112 InterPro:IPR002058 ProtClustDB:CLSZ2429765
RefSeq:XP_646848.1 ProteinModelPortal:Q55F22
EnsemblProtists:DDB0304624 GeneID:8616531 KEGG:ddi:DDB_G0268662
InParanoid:Q55F22 Uniprot:Q55F22
Length = 2523
Score = 300 (110.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 98/299 (32%), Positives = 144/299 (48%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP--DEVYYKDPVLRPYVFFDVIHGRE 59
+L+ QYRMHP I FPS FY+ RL D ++V +L ++ D P F+DVI +E
Sbjct: 1797 MLNTQYRMHPTISRFPSNQFYKDRLLDGDNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKE 1856
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL--QH-EFR 116
G S +N E L + L + K + GIITPYKLQ + QH +F
Sbjct: 1857 E--SGKRSLKNKLEITMVFTLIKKLVQDYPECK--KFSFGIITPYKLQKSEIKEQHKQFN 1912
Query: 117 NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALW 176
LN E +T+D QG E+D+II+SCVR+ +GF++D RR+NVALTRA+ L+
Sbjct: 1913 YPLNIET------STIDGVQGSEKDIIILSCVRSER--IGFLSDRRRINVALTRAKFGLF 1964
Query: 177 VMGNAGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNAR 236
V+GN+ L + W + N + +DS K SV L + Y L P+
Sbjct: 1965 VIGNSKLLKKDRTWGPFCQYVHSINSMVSIDS--KGISV-LEQQIQEYDSLN---PNGLI 2018
Query: 237 GLRSAGQRHRSFDMNMESRSGTPSEDDEKVSRNGNYRPFKPPLENSLDDFDQSGEKYRD 295
S + +D + E ED+E++ + + N + +Q GE D
Sbjct: 2019 EFHSDSED--DYD-DSEDEEEDEDEDNEEIQEHD-----EDDESNRIKKINQEGEDNDD 2069
>DICTYBASE|DDB_G0268914 [details] [associations]
symbol:DDB_G0268914 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR003593
SMART:SM00382 dictyBase:DDB_G0268914 GO:GO:0005524
EMBL:AAFI02000004 GO:GO:0017111 eggNOG:COG1112 RefSeq:XP_647058.1
ProteinModelPortal:Q55EG2 EnsemblProtists:DDB0190122 GeneID:8616757
KEGG:ddi:DDB_G0268914 InParanoid:Q55EG2 OMA:ANCRVEN Uniprot:Q55EG2
Length = 4540
Score = 299 (110.3 bits), Expect = 1.9e-24, P = 1.9e-24
Identities = 75/196 (38%), Positives = 111/196 (56%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEV---YYKDPVLRPYVFFDVIHGR 58
+L+VQYRMHP I FPS FY L D ++V++ D ++++ FFDV R
Sbjct: 3762 MLNVQYRMHPLISKFPSSQFYHDILKDGDNVVS-SDAYSLRFHENQDYGAIRFFDVTDSR 3820
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E G S +N E L + L T + + GI+TPYKLQ K ++ ++
Sbjct: 3821 EER--GKTSIKNQLEITMVFTLIKKL--TQDHPETKQYSFGIVTPYKLQRKEIEDAYKQ- 3875
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVM 178
LN ++ I T+D+FQG E+D++IMSCVR N +GF++D RR+NV++TRA+ L+++
Sbjct: 3876 LNLS--LNIEIKTIDSFQGSEKDIMIMSCVR--NESIGFLSDRRRINVSITRAKYGLFII 3931
Query: 179 GNAGALTQSDDWAALI 194
GNA L W LI
Sbjct: 3932 GNATLLKLDRTWGELI 3947
>DICTYBASE|DDB_G0289529 [details] [associations]
symbol:DDB_G0289529 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002934
InterPro:IPR003593 Pfam:PF01909 SMART:SM00382
dictyBase:DDB_G0289529 GO:GO:0005524 EMBL:AAFI02000141
GO:GO:0017111 eggNOG:COG1112 GO:GO:0016779 RefSeq:XP_636183.1
ProteinModelPortal:Q54HF4 EnsemblProtists:DDB0219440 GeneID:8627170
KEGG:ddi:DDB_G0289529 InParanoid:Q54HF4 ProtClustDB:CLSZ2429765
Uniprot:Q54HF4
Length = 1677
Score = 294 (108.6 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 76/194 (39%), Positives = 111/194 (57%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESV-INLPDEV-YYKDPVLRPYVFFDVIHGRES 60
L+ QYRMHP F S FY G L D E+V I+ + ++ DP P FFD+ + +
Sbjct: 1396 LNTQYRMHPVTSKFISEEFYNGTLKDGENVSIDSYNNCKFHFDPSFGPMKFFDL--PKSN 1453
Query: 61 HRGGSVSYQNVDEA-KFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVL 119
+ S N DE K + E ++K + K++ GIITPYKLQ+ ++ + L
Sbjct: 1454 QKVIKKSIMNQDEIDKVFTLIKELIEKYPECK---KLSFGIITPYKLQM----NQIKEQL 1506
Query: 120 NSEEGKDLYIN--TVDAFQGQERDVIIMSCVRA-SNHGVGFVADIRRMNVALTRARRALW 176
N E +L I+ T+D QG E+D+IIMSCVR+ G+GF++D RR+NVALTRA+ L+
Sbjct: 1507 NRSEHHNLNISVSTIDGVQGSEKDIIIMSCVRSIEKFGIGFLSDRRRINVALTRAKLGLY 1566
Query: 177 VMGNAGALTQSDDW 190
V+G L + + W
Sbjct: 1567 VIGTYKVLAKDNTW 1580
>SGD|S000004685 [details] [associations]
symbol:NAM7 "ATP-dependent RNA helicase of the SFI
superfamily" species:4932 "Saccharomyces cerevisiae" [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000956 "nuclear-transcribed mRNA catabolic process"
evidence=IMP] [GO:0070478 "nuclear-transcribed mRNA catabolic
process, 3'-5' exonucleolytic nonsense-mediated decay"
evidence=IGI;IMP] [GO:0008298 "intracellular mRNA localization"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0016567 "protein ubiquitination"
evidence=IMP;IDA;IPI] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005844 "polysome" evidence=TAS] [GO:0003676 "nucleic acid
binding" evidence=TAS] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA;TAS]
[GO:0006449 "regulation of translational termination" evidence=TAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IGI] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006452 "translational frameshifting" evidence=IMP] [GO:0008186
"RNA-dependent ATPase activity" evidence=TAS] InterPro:IPR003593
InterPro:IPR018999 Pfam:PF09416 SMART:SM00382 SGD:S000004685
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003676 GO:GO:0016567
GO:GO:0030466 EMBL:BK006946 EMBL:Z49259 GO:GO:0005844 GO:GO:0008298
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 GO:GO:0004004
GO:GO:0070478 GO:GO:0006449 GeneTree:ENSGT00550000074391
EMBL:X62394 EMBL:M76659 PIR:S23408 RefSeq:NP_013797.1 PDB:2XZL
PDBsum:2XZL ProteinModelPortal:P30771 SMR:P30771 DIP:DIP-2373N
IntAct:P30771 MINT:MINT-492322 STRING:P30771 PaxDb:P30771
PeptideAtlas:P30771 EnsemblFungi:YMR080C GeneID:855104
KEGG:sce:YMR080C CYGD:YMR080c HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL OrthoDB:EOG405W86 EvolutionaryTrace:P30771
NextBio:978431 Genevestigator:P30771 GermOnline:YMR080C
Uniprot:P30771
Length = 971
Score = 285 (105.4 bits), Expect = 8.1e-24, P = 8.1e-24
Identities = 75/216 (34%), Positives = 119/216 (55%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN--LPDEVYYKDPVLRPYVFFDVIHGRES 60
L VQYRM+P++ +FPS FY+G L + ++ +P+ + P+ + F +GRE
Sbjct: 634 LEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKF-PWPIRGIPMMFWANYGREE 692
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
S+ N EA C E + L G+ +G+ITPY+ Q + + +N
Sbjct: 693 ISANGTSFLNRIEAMN--C--ERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQ--MN 746
Query: 121 SEEGKDLYIN----TVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRAL 175
KDLYI +VDAFQG+E+D II+SCVRA+ +GF+ D RR+NV LTRA+ L
Sbjct: 747 GSLDKDLYIKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGL 806
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMD--MDSL 209
++GN +L ++ W L+ + + C ++ +D+L
Sbjct: 807 VILGNPRSLARNTLWNHLLIHFREKGCLVEGTLDNL 842
>UNIPROTKB|F1S0U6 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007623 "circadian rhythm" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654 GO:GO:0006302
KO:K10706 GeneTree:ENSGT00580000081652 CTD:23064 OMA:RLINHFE
PANTHER:PTHR10887:SF15 EMBL:CU550727 EMBL:CU914573
RefSeq:XP_003353743.1 UniGene:Ssc.45527 Ensembl:ENSSSCT00000006294
GeneID:100511239 KEGG:ssc:100511239 Uniprot:F1S0U6
Length = 2661
Score = 290 (107.1 bits), Expect = 9.3e-24, P = 9.3e-24
Identities = 88/289 (30%), Positives = 148/289 (51%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL-TDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
L+VQYRMHP I FPS + Y L T+S + + D +PY+ FDV G S
Sbjct: 2248 LTVQYRMHPDICLFPSNYIYNRNLKTNSLTEASRCSS----DWPFQPYLVFDV--GDGSE 2301
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
R + SY NV E K + + + ++ + + + GIIT YK Q +Q + +
Sbjct: 2302 RRDNDSYVNVQEIKLVMEIIKLIKDKRRDVTFRNI--GIITHYKAQKTLIQKDLDKEFDR 2359
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRA--SNHGVGFVADIRRMNVALTRARRALWVMG 179
+ + ++TVD FQG+++D +I++CVRA S +GF+A ++R+NV +TRA+ +L+++G
Sbjct: 2360 KGPAE--VDTVDGFQGRQKDCVIVTCVRAKTSQGSIGFLASLQRLNVTITRAKYSLFILG 2417
Query: 180 NAGALTQSDDWAALIADSKARNCYMDM-DSLPKEFSVALAAKAPGYGPLQGKIPHNAR-G 237
+ L ++D W LI D++ R + D + + + P LQ + H G
Sbjct: 2418 HLRTLRENDHWNQLIEDAQKRGAIIKTCDKNYRHDATKILKPKP---VLQRSLTHPPTIG 2474
Query: 238 LRSAGQRHRSFDMNMESRSGTPSE-DDEKVSRNGNYRPFKPPLENSLDD 285
L ++ S S +PS+ D V+ + P +PP+++ L D
Sbjct: 2475 LEASPDGEFSRTAVASSLYHSPSDCRDATVTASD---PERPPIQDRLRD 2520
>TAIR|locus:2135472 [details] [associations]
symbol:AT4G05540 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002687 GO:GO:0004386
KO:K10706 IPI:IPI00530269 RefSeq:NP_567301.2 UniGene:At.54170
ProteinModelPortal:F4JGH5 SMR:F4JGH5 PRIDE:F4JGH5
EnsemblPlants:AT4G05540.1 GeneID:825906 KEGG:ath:AT4G05540
OMA:WVIGNER Uniprot:F4JGH5
Length = 689
Score = 280 (103.6 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 71/190 (37%), Positives = 110/190 (57%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLP-DEVYYKDPVLRPYVFFDVIHGRES 60
LL+VQYRMHP I FP+ FY G+++D+E V + + + + + F +V G+E
Sbjct: 499 LLNVQYRMHPSISLFPNMEFYGGKISDAEIVKESTYQKRFLQGNMFGSFSFINVGLGKEE 558
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
G S +N+ E + +L K + S K++VG+I+PYK Q+ +Q +
Sbjct: 559 FGDGH-SPKNMVEIAVVSEILTNLLK-VSSETKTKMSVGVISPYKAQVSAIQERIGDKYT 616
Query: 121 SEEGK--DLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWV 177
S L + +VD FQG E D+II+S VR++ +G +GF+++ +R NVALTRAR LWV
Sbjct: 617 SVSDNLFTLNVRSVDGFQGGEEDIIIISTVRSNCNGNIGFLSNRQRANVALTRARHCLWV 676
Query: 178 MGNAGALTQS 187
+GN L+ S
Sbjct: 677 IGNERTLSLS 686
>UNIPROTKB|Q7Z333 [details] [associations]
symbol:SETX "Probable helicase senataxin" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IC] [GO:0003678 "DNA helicase
activity" evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006302
"double-strand break repair" evidence=IDA] [GO:0032508 "DNA duplex
unwinding" evidence=TAS] InterPro:IPR026121 GO:GO:0005524
GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0003677
GO:GO:0008219 GO:GO:0006396 GO:GO:0006302 Orphanet:803
eggNOG:COG1112 GO:GO:0003678 KO:K10706 EMBL:AL159997 Orphanet:64753
EMBL:AY362728 EMBL:BX537849 EMBL:BX538166 EMBL:CR749249
EMBL:AL353701 EMBL:BC032600 EMBL:BC032622 EMBL:BC078166
EMBL:BC106017 EMBL:BC137350 EMBL:AB014525 EMBL:AK001456
EMBL:AK022902 IPI:IPI00142538 IPI:IPI00646645 IPI:IPI00719643
RefSeq:NP_055861.3 UniGene:Hs.460317 ProteinModelPortal:Q7Z333
SMR:Q7Z333 IntAct:Q7Z333 STRING:Q7Z333 PhosphoSite:Q7Z333
DMDM:296453021 PaxDb:Q7Z333 PRIDE:Q7Z333 Ensembl:ENST00000224140
Ensembl:ENST00000372169 Ensembl:ENST00000393220
Ensembl:ENST00000436441 GeneID:23064 KEGG:hsa:23064 UCSC:uc004cbj.3
UCSC:uc004cbk.3 UCSC:uc010mzt.3 CTD:23064 GeneCards:GC09M135136
HGNC:HGNC:445 HPA:HPA024105 MIM:602433 MIM:606002 MIM:608465
neXtProt:NX_Q7Z333 PharmGKB:PA24751 HOVERGEN:HBG108476
InParanoid:Q7Z333 OMA:RLINHFE OrthoDB:EOG4XWFWX PhylomeDB:Q7Z333
ChiTaRS:SETX GenomeRNAi:23064 NextBio:44145 ArrayExpress:Q7Z333
Bgee:Q7Z333 Genevestigator:Q7Z333 GermOnline:ENSG00000107290
PANTHER:PTHR10887:SF15 Uniprot:Q7Z333
Length = 2677
Score = 288 (106.4 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 90/297 (30%), Positives = 145/297 (48%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
L+VQYRMHP I FPS + Y L + + D +PY+ FDV G S R
Sbjct: 2254 LTVQYRMHPDICLFPSNYVYNRNLKTNRQTEAIRCS---SDWPFQPYLVFDV--GDGSER 2308
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSE 122
+ SY NV E K + + + ++ K + + GIIT YK Q +Q + + +
Sbjct: 2309 RDNDSYINVQEIKLVMEIIKLIKDKRKDVSFRNI--GIITHYKAQKTMIQKDLDKEFDRK 2366
Query: 123 EGKDLYINTVDAFQGQERDVIIMSCVRASN-HG-VGFVADIRRMNVALTRARRALWVMGN 180
+ ++TVDAFQG+++D +I++CVRA++ G +GF+A ++R+NV +TRA+ +L+++G+
Sbjct: 2367 GPAE--VDTVDAFQGRQKDCVIVTCVRANSIQGSIGFLASLQRLNVTITRAKYSLFILGH 2424
Query: 181 AGALTQSDDWAALIADSKARNCYMDM-DSLPKEFSVALAAKAPGYGPLQGKIPHNA---- 235
L ++ W LI D++ R + D + +V + P LQ + H
Sbjct: 2425 LRTLMENQHWNQLIQDAQKRGAIIKTCDKNYRHDAVKILKLKP---VLQRSLTHPPTIAP 2481
Query: 236 RGLRSAGQRHRS-FDMNMESRS------GTPSEDDEKVSRNGNYRPFKPPLENSLDD 285
G R G S D S TPS+ E + P +PP+ + L D
Sbjct: 2482 EGSRPQGGLPSSKLDSGFAKTSVAASLYHTPSDSKEITLTVTSKDPERPPVHDQLQD 2538
>MGI|MGI:2443480 [details] [associations]
symbol:Setx "senataxin" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR026121 MGI:MGI:2443480 GO:GO:0005524 GO:GO:0005737
GO:GO:0005654 GO:GO:0005730 GO:GO:0007623 GO:GO:0006302
GO:GO:0004386 eggNOG:COG1112 GO:GO:0006369 KO:K10706 EMBL:AL772379
GeneTree:ENSGT00580000081652 CTD:23064 HOVERGEN:HBG108476
OrthoDB:EOG4XWFWX PANTHER:PTHR10887:SF15 EMBL:AL845267
EMBL:AK044730 EMBL:AK048354 EMBL:AK077911 EMBL:BC046382
EMBL:BC058109 EMBL:BC079604 EMBL:AK129177 EMBL:BK001523
IPI:IPI00421108 IPI:IPI00626271 RefSeq:NP_932150.2 UniGene:Mm.41867
ProteinModelPortal:A2AKX3 SMR:A2AKX3 DIP:DIP-56995N IntAct:A2AKX3
STRING:A2AKX3 PhosphoSite:A2AKX3 PaxDb:A2AKX3 PRIDE:A2AKX3
Ensembl:ENSMUST00000061578 Ensembl:ENSMUST00000129544 GeneID:269254
KEGG:mmu:269254 UCSC:uc008izm.1 InParanoid:A2AKX3 NextBio:392760
Bgee:A2AKX3 CleanEx:MM_SETX Genevestigator:A2AKX3 Uniprot:A2AKX3
Length = 2646
Score = 287 (106.1 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 69/200 (34%), Positives = 115/200 (57%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
L++QYRMHP I FPS + Y L + ++ + P +PY+ FDV G S R
Sbjct: 2230 LTIQYRMHPDICLFPSNYVYNKNLKTNRLTESIRCSSEW--P-FQPYLVFDV--GDGSER 2284
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSE 122
+ SY NV E K + + + +++ K + + GIIT YK Q +Q + + +
Sbjct: 2285 RDNDSYINVQEIKLVMEIIKLIKEKRKDISFRNI--GIITHYKAQKTMIQKDLEKEFDKK 2342
Query: 123 EGKDLYINTVDAFQGQERDVIIMSCVRAS--NHGVGFVADIRRMNVALTRARRALWVMGN 180
+ ++TVDAFQG+++D II++CVRAS +GF+A ++R+NV +TRA+ +L+++G+
Sbjct: 2343 GPAE--VDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRLNVTITRAKYSLFILGH 2400
Query: 181 AGALTQSDDWAALIADSKAR 200
L ++ W LI D++ R
Sbjct: 2401 LRTLMENQHWYELIQDAQKR 2420
>UNIPROTKB|D4AEB3 [details] [associations]
symbol:Setx "Protein Setx" species:10116 "Rattus
norvegicus" [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] InterPro:IPR026121 RGD:1565575 GO:GO:0005737
GO:GO:0005654 GO:GO:0006302 KO:K10706 GeneTree:ENSGT00580000081652
CTD:23064 OMA:RLINHFE OrthoDB:EOG4XWFWX PANTHER:PTHR10887:SF15
IPI:IPI00476851 RefSeq:XP_342401.3 ProteinModelPortal:D4AEB3
PRIDE:D4AEB3 Ensembl:ENSRNOT00000017984 GeneID:362096
KEGG:rno:362096 NextBio:678646 ArrayExpress:D4AEB3 Uniprot:D4AEB3
Length = 2647
Score = 282 (104.3 bits), Expect = 6.6e-23, P = 6.6e-23
Identities = 68/200 (34%), Positives = 112/200 (56%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
L++QYRMHP I FPS + Y L + + + P +PY+ FDV G E
Sbjct: 2231 LTIQYRMHPDICLFPSNYVYNKNLKTNRLTETIRCSSEW--P-FQPYLVFDVGDGSEQRD 2287
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSE 122
S Y NV E K + + + +++ K + + GIIT YK Q +Q + + +
Sbjct: 2288 NDS--YINVQEIKLVMEIIKLIKEKRKDISFRNI--GIITHYKAQKTMIQKDLEKEFDKK 2343
Query: 123 EGKDLYINTVDAFQGQERDVIIMSCVRAS--NHGVGFVADIRRMNVALTRARRALWVMGN 180
+ ++TVDAFQG+++D II++CVRAS +GF+A ++R+NV +TRA+ +L+++G+
Sbjct: 2344 GPAE--VDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRLNVTITRAKYSLFILGH 2401
Query: 181 AGALTQSDDWAALIADSKAR 200
L ++ W LI D++ R
Sbjct: 2402 LRTLMENQHWYELIQDAQKR 2421
>UNIPROTKB|E1BAS6 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007623 "circadian rhythm" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654 GO:GO:0006302
GeneTree:ENSGT00580000081652 OMA:RLINHFE PANTHER:PTHR10887:SF15
EMBL:DAAA02032276 EMBL:DAAA02032274 EMBL:DAAA02032275
IPI:IPI00842535 Ensembl:ENSBTAT00000042924 Uniprot:E1BAS6
Length = 2662
Score = 280 (103.6 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 69/200 (34%), Positives = 113/200 (56%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
L++QYRMHP I FPS + Y G L + D +PY+ FDV G E R
Sbjct: 2244 LTIQYRMHPDICLFPSSYIYDGILRTNRGT---ETSRCSSDWPFQPYLVFDVGDGLE--R 2298
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSE 122
+ SY NV E K + L + ++ + + + GIIT YK Q +Q + + +
Sbjct: 2299 RDNDSYVNVQEIKLVMELIKLIKDKRRDVTFRNI--GIITHYKAQKTMIQKDLDKEFDRK 2356
Query: 123 EGKDLYINTVDAFQGQERDVIIMSCVRAS-NHG-VGFVADIRRMNVALTRARRALWVMGN 180
+ ++TVDAFQG+++D +I++CVRA+ G +GF+A ++R+NV +TRA+ +L+++G+
Sbjct: 2357 GAAE--VDTVDAFQGRQKDCVIVTCVRANATQGSIGFLASLQRLNVTITRAKYSLFILGH 2414
Query: 181 AGALTQSDDWAALIADSKAR 200
L ++ W LI D++ R
Sbjct: 2415 LRTLVENRHWYHLIQDAQKR 2434
>WB|WBGene00004880 [details] [associations]
symbol:smg-2 species:6239 "Caenorhabditis elegans"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IGI] [GO:0005737 "cytoplasm"
evidence=IEA;IDA;TAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0030538
"embryonic genitalia morphogenesis" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0051721 "protein phosphatase 2A
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
EMBL:AF074017 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0016246 GO:GO:0000184 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003723 GO:GO:0040035 eggNOG:COG1112
GO:GO:0004004 GO:GO:0030538 HOGENOM:HOG000205990 KO:K14326
EMBL:FO081800 PIR:T43280 RefSeq:NP_490829.1
ProteinModelPortal:O76512 SMR:O76512 MINT:MINT-255670 STRING:O76512
PaxDb:O76512 GeneID:171696 KEGG:cel:CELE_Y48G8AL.6 UCSC:Y48G8AL.6
CTD:171696 WormBase:Y48G8AL.6 InParanoid:O76512 NextBio:872341
Uniprot:O76512
Length = 1069
Score = 273 (101.2 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 89/266 (33%), Positives = 141/266 (53%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTD--SESVINLPDEVYYKDPVLRPYVFFDVIHGRES 60
L VQYRMHP + +FPS FY G L + +E+ ++ ++ +P FF G E
Sbjct: 672 LQVQYRMHPVLSEFPSNVFYDGSLQNGVTENDRHMTGVDWHWPKPNKP-AFFWHCSGSEE 730
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF--RNV 118
S+ N EA V E L L G+ +G+IT Y+ Q + + +
Sbjct: 731 LSASGTSFLNRTEAA-NV---EKLVSKLIKAGVQPHQIGVITSYEGQRSFIVNYMHTQGT 786
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALTRARRALWV 177
LNS+ +++ I +VDAFQG+E+D II++CVR+++ G+GF++D RR+NVA+TRA+ L +
Sbjct: 787 LNSKLYENVEIASVDAFQGREKDYIIVTCVRSNDILGIGFLSDPRRLNVAITRAKYGLVL 846
Query: 178 MGNAGALTQSDDWAALIADSKARNCYMD--MDSLPKEFSVALAAKAPGYGPLQGKIPHNA 235
+GNA L + D W LI K++ + +++L K ++AL KA + I NA
Sbjct: 847 VGNAKVLARHDLWHELINHYKSKEMLYEGPINAL-KPLNLALP-KATIR--TKNNIAGNA 902
Query: 236 RGLRSAGQRHRSFDMNMESRSGTPSE 261
G + + N E +S PS+
Sbjct: 903 NRF---GIKRMQYTFN-EYKSNDPSQ 924
>UNIPROTKB|F1PCI1 [details] [associations]
symbol:C4orf21 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 OMA:HKLGTNK EMBL:AAEX03016829
Ensembl:ENSCAFT00000018553 Uniprot:F1PCI1
Length = 1024
Score = 271 (100.5 bits), Expect = 2.8e-22, P = 2.8e-22
Identities = 76/203 (37%), Positives = 109/203 (53%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR--PYVFFDVIHGR 58
+LL QYR HP I D + FY+G L D S + P+L P + F I G
Sbjct: 792 VLLRTQYRCHPAISDISNDLFYEGNLVDGISETE-------RGPLLEWLPTLCFYNIKGP 844
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E + S+ NV EA F + L +Q + S G+ +G+IT YK Q+ L H V
Sbjct: 845 EQIERDN-SFHNVAEAAFTLKL---IQSLIAS-GIAGSMIGVITLYKSQMYKLCHLLSAV 899
Query: 119 -LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWV 177
++ + K + ++TVDAFQG E+++II+SCVR VGF+ +RMNVALTR RR L +
Sbjct: 900 DFDNPDIKAVQVSTVDAFQGAEKEIIILSCVRTRQ--VGFIDSEKRMNVALTRGRRHLLI 957
Query: 178 MGNAGALTQSDDWAALIADSKAR 200
+GN L ++ W +I + R
Sbjct: 958 VGNLACLRKNRLWGRVIQHCEGR 980
>UNIPROTKB|F1PHA4 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006302 "double-strand break repair"
evidence=IEA] InterPro:IPR026121 GO:GO:0006302
GeneTree:ENSGT00580000081652 OMA:RLINHFE PANTHER:PTHR10887:SF15
EMBL:AAEX03006816 EMBL:AAEX03006817 Ensembl:ENSCAFT00000031656
Uniprot:F1PHA4
Length = 2531
Score = 274 (101.5 bits), Expect = 4.4e-22, P = 4.4e-22
Identities = 68/201 (33%), Positives = 114/201 (56%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL-TDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
L+VQYRMHP I FPS + Y L T+ ++ N D +PY+ FDV G S
Sbjct: 2277 LTVQYRMHPDICLFPSNYVYNRSLKTNRQTETNRCSS----DWPFQPYLVFDV--GDGSE 2330
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
R + SY NV E K + + + ++ + + + GIIT YK Q +Q + +
Sbjct: 2331 RRDNDSYVNVQEIKLVMEIIKLIKDKRRDVTFRNI--GIITHYKAQKTMIQKDLDKEFDR 2388
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRAS--NHGVGFVADIRRMNVALTRARRALWVMG 179
+ + ++TVD FQG+++D +I++CVRA+ +GF+A ++R+NV +TRA+ +L+++G
Sbjct: 2389 KGPAE--VDTVDGFQGRQKDCVIVTCVRANAMQGSIGFLASLQRLNVTITRAKYSLFILG 2446
Query: 180 NAGALTQSDDWAALIADSKAR 200
+ L ++ W LI D++ R
Sbjct: 2447 HLRTLMENQHWNHLIQDAQKR 2467
>UNIPROTKB|E1BG37 [details] [associations]
symbol:E1BG37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 EMBL:DAAA02016483 IPI:IPI00912094
Ensembl:ENSBTAT00000017567 OMA:HKLGTNK Uniprot:E1BG37
Length = 933
Score = 257 (95.5 bits), Expect = 8.3e-20, P = 8.3e-20
Identities = 73/203 (35%), Positives = 107/203 (52%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR--PYVFFDVIHGR 58
+LL QYR HP I + FY+G L + S + P+L P + F + G
Sbjct: 694 ILLRTQYRCHPTISAIANDLFYEGNLMNGISETE-------RSPLLEWLPTLCFYNVKGL 746
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E G+ S+ NV EA F + L +Q + S G+ +G+IT YK Q+ L H +
Sbjct: 747 EQIERGN-SFHNVAEAAFTLKL---IQSLIAS-GIAGSMIGVITLYKSQMYKLCHLLSAM 801
Query: 119 -LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWV 177
+ K + ++TVDAFQG E+++II+SCVR VGF+ +RMNVALTR RR L +
Sbjct: 802 DFDHPNLKAVQVSTVDAFQGAEKEIIILSCVRTRQ--VGFIDSEKRMNVALTRGRRHLLI 859
Query: 178 MGNAGALTQSDDWAALIADSKAR 200
+GN L ++ W +I + R
Sbjct: 860 VGNLACLRKNRLWGRVIQHCEGR 882
>UNIPROTKB|Q6ZU11 [details] [associations]
symbol:Q6ZU11 "Uncharacterized protein FLJ44066"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0016021 GO:GO:0008270
eggNOG:COG1112 UniGene:Hs.713663 EMBL:AK126054 EMBL:AL137700
IPI:IPI00300207 IPI:IPI00880006 PIR:T46441 RefSeq:NP_060862.3
UniGene:Hs.380346 ProteinModelPortal:Q6ZU11 SMR:Q6ZU11
PhosphoSite:Q6ZU11 DMDM:74711848 PaxDb:Q6ZU11 PRIDE:Q6ZU11
GeneID:55345 KEGG:hsa:55345 CTD:55345 HPA:HPA030706
neXtProt:NX_Q6ZU11 PharmGKB:PA144596502 HOGENOM:HOG000155510
InParanoid:Q6ZU11 PhylomeDB:Q6ZU11 GenomeRNAi:55345 NextBio:59679
ArrayExpress:Q6ZU11 Bgee:Q6ZU11 Genevestigator:Q6ZU11
Uniprot:Q6ZU11
Length = 926
Score = 256 (95.2 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 72/203 (35%), Positives = 108/203 (53%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR--PYVFFDVIHGR 58
+LL QYR HP I + FY+G L + + I + P+L P + F + G
Sbjct: 693 ILLRTQYRCHPAISAIANDLFYKGALMNGVTEIE-------RSPLLEWLPTLCFYNVKGL 745
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E + S+ NV EA F + L +Q + S G+ +G+IT YK Q+ L H V
Sbjct: 746 EQIERDN-SFHNVAEATFTLKL---IQSLIAS-GIAGSMIGVITLYKSQMYKLCHLLSAV 800
Query: 119 -LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWV 177
+ + K + ++TVDAFQG E+++II+SCVR VGF+ +RMNVALTR +R L +
Sbjct: 801 DFHHPDIKTVQVSTVDAFQGAEKEIIILSCVRTRQ--VGFIDSEKRMNVALTRGKRHLLI 858
Query: 178 MGNAGALTQSDDWAALIADSKAR 200
+GN L ++ W +I + R
Sbjct: 859 VGNLACLRKNQLWGRVIQHCEGR 881
>RGD|1565575 [details] [associations]
symbol:Setx "senataxin" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=IEA;ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=ISO] [GO:0007623 "circadian rhythm"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR026121 RGD:1565575 GO:GO:0006302 PANTHER:PTHR10887:SF15
IPI:IPI00560336 Ensembl:ENSRNOT00000018281 UCSC:RGD:1565575
ArrayExpress:F1M0E2 Uniprot:F1M0E2
Length = 380
Score = 176 (67.0 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
Identities = 32/74 (43%), Positives = 55/74 (74%)
Query: 129 INTVDAFQGQERDVIIMSCVRAS--NHGVGFVADIRRMNVALTRARRALWVMGNAGALTQ 186
++TVDAFQG+++D II++CVRAS +GF+A ++R+NV +TRA+ +L+++G+ L +
Sbjct: 275 VDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRLNVTITRAKYSLFILGHLRTLME 334
Query: 187 SDDWAALIADSKAR 200
+ W LI D++ R
Sbjct: 335 NQHWYELIQDAQKR 348
Score = 120 (47.3 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
Identities = 36/112 (32%), Positives = 54/112 (48%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
L++QYRMHP I FPS + Y L + + + P +PY+ FDV G E
Sbjct: 103 LTIQYRMHPDICLFPSNYVYNKNLKTNRLTETIRCSSEW--P-FQPYLVFDVGDGSEQRD 159
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHE 114
S Y NV E K + + + +++ K + + GIIT YK Q +Q +
Sbjct: 160 NDS--YINVQEIKLVMEIIKLIKEKRKDISFRNI--GIITHYKAQKTMIQKD 207
>UNIPROTKB|G5EA02 [details] [associations]
symbol:C4orf21 "Uncharacterized protein C4orf21"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
EMBL:CH471057 InterPro:IPR018838 Pfam:PF10382 UniGene:Hs.713663
RefSeq:NP_060862.3 UniGene:Hs.380346 GeneID:55345 KEGG:hsa:55345
CTD:55345 GenomeRNAi:55345 NextBio:59679 EMBL:AC106864
EMBL:AC023886 PRIDE:G5EA02 Ensembl:ENST00000505019 HGNC:HGNC:25654
OMA:NTYESSG ArrayExpress:G5EA02 Bgee:G5EA02 Uniprot:G5EA02
Length = 2104
Score = 256 (95.2 bits), Expect = 3.5e-19, P = 3.5e-19
Identities = 72/203 (35%), Positives = 108/203 (53%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR--PYVFFDVIHGR 58
+LL QYR HP I + FY+G L + + I + P+L P + F + G
Sbjct: 1871 ILLRTQYRCHPAISAIANDLFYKGALMNGVTEIE-------RSPLLEWLPTLCFYNVKGL 1923
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E + S+ NV EA F + L +Q + S G+ +G+IT YK Q+ L H V
Sbjct: 1924 EQIERDN-SFHNVAEATFTLKL---IQSLIAS-GIAGSMIGVITLYKSQMYKLCHLLSAV 1978
Query: 119 -LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWV 177
+ + K + ++TVDAFQG E+++II+SCVR VGF+ +RMNVALTR +R L +
Sbjct: 1979 DFHHPDIKTVQVSTVDAFQGAEKEIIILSCVRTRQ--VGFIDSEKRMNVALTRGKRHLLI 2036
Query: 178 MGNAGALTQSDDWAALIADSKAR 200
+GN L ++ W +I + R
Sbjct: 2037 VGNLACLRKNQLWGRVIQHCEGR 2059
>RGD|1589127 [details] [associations]
symbol:LOC684558 "similar to regulator of nonsense transcripts
1" species:10116 "Rattus norvegicus" [GO:0000785 "chromatin"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0009048 "dosage compensation by inactivation of X chromosome"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0044530 "supraspliceosomal complex" evidence=IEA]
[GO:0071044 "histone mRNA catabolic process" evidence=IEA]
GO:GO:0006260 GO:GO:0006281 GO:GO:0000785 GO:GO:0003682
GO:GO:0007049 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GeneTree:ENSGT00550000074391 IPI:IPI00767398
PRIDE:F1LY19 Ensembl:ENSRNOT00000027268 Uniprot:F1LY19
Length = 391
Score = 244 (91.0 bits), Expect = 5.4e-19, P = 5.4e-19
Identities = 63/159 (39%), Positives = 94/159 (59%)
Query: 50 VFFDVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK 109
+FF V G+E SY N EA V E + L G +GIITPY+ Q
Sbjct: 19 MFFYVTQGQEEIASSGTSYLNRTEAA-NV---EKITTKLLKAGAKPDQIGIITPYEGQRS 74
Query: 110 CL-QH-EFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNV 166
L Q+ +F L+++ +++ I +VDAFQG+E+D II+SCVRA+ H G+GF+ D RR+NV
Sbjct: 75 YLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNV 134
Query: 167 ALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMD 205
ALTRAR + ++GN AL++ W L++ K + ++
Sbjct: 135 ALTRARYGVIIVGNPKALSKQPLWNHLLSYYKEQKALVE 173
>UNIPROTKB|E1BQD2 [details] [associations]
symbol:C4H4orf21 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 OMA:HKLGTNK EMBL:AADN02009328
IPI:IPI00577016 Ensembl:ENSGALT00000019715 Uniprot:E1BQD2
Length = 913
Score = 250 (93.1 bits), Expect = 8.6e-19, P = 8.6e-19
Identities = 73/204 (35%), Positives = 112/204 (54%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR--PYVFFDVIHGR 58
+LL QYR HP I + FY+G L D S E + P+L P + F ++G
Sbjct: 689 ILLRTQYRCHPAISAIANELFYEGNLIDGVS----EKE---RSPLLDWLPTLCFYSVNGL 741
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
E + S+ N+ E F V + +Q + S G+ VG+IT YK Q+ LQ+ R++
Sbjct: 742 EQIERDN-SFYNMAEVHFTV---KFIQALIAS-GIDGSAVGVITFYKSQMYKLQNLLRSI 796
Query: 119 LNSEEG--KDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALW 176
+SE K + ++TVDAFQG E++++++SCVR GF +RMNVALTRA+R L
Sbjct: 797 -HSEAFPVKAVQVSTVDAFQGAEKEIVVLSCVRTRQ--TGFTDSEKRMNVALTRAKRHLL 853
Query: 177 VMGNAGALTQSDDWAALIADSKAR 200
++GN L+++ + +I K R
Sbjct: 854 IVGNLACLSKNRLYERVINHCKGR 877
>SGD|S000001500 [details] [associations]
symbol:HCS1 "Hexameric DNA polymerase alpha-associated DNA
helicase A" species:4932 "Saccharomyces cerevisiae" [GO:0003677
"DNA binding" evidence=IEA] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=IDA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IDA] [GO:0006273 "lagging
strand elongation" evidence=IC] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0033203 "DNA helicase A
complex" evidence=IDA] InterPro:IPR003593 InterPro:IPR004483
SMART:SM00382 SGD:S000001500 GO:GO:0005524 GO:GO:0005737
GO:GO:0003677 EMBL:BK006944 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:X74152 GO:GO:0006273 GO:GO:0043141
HOGENOM:HOG000185831 OrthoDB:EOG444PTN GO:GO:0033203 EMBL:Z28017
PIR:S34700 RefSeq:NP_012908.1 ProteinModelPortal:P34243 SMR:P34243
DIP:DIP-1383N IntAct:P34243 MINT:MINT-399891 STRING:P34243
PaxDb:P34243 EnsemblFungi:YKL017C GeneID:853852 KEGG:sce:YKL017C
CYGD:YKL017c GeneTree:ENSGT00700000104572 OMA:QGGDFPE
SABIO-RK:P34243 NextBio:975085 Genevestigator:P34243
GermOnline:YKL017C TIGRFAMs:TIGR00376 Uniprot:P34243
Length = 683
Score = 241 (89.9 bits), Expect = 7.5e-18, P = 7.5e-18
Identities = 68/195 (34%), Positives = 109/195 (55%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-----LP--DEVYYKDP--VLRPYVFFD 53
L+VQYRM+ I +FPS Y G+L +V N LP D +D P +++D
Sbjct: 465 LNVQYRMNQKIMEFPSHSMYNGKLLADATVANRLLIDLPTVDATPSEDDDDTKIPLIWYD 524
Query: 54 VIHG---RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKC 110
G +E+ ++ +E + + + EH++ L+S + + ++G+I+PY Q+
Sbjct: 525 T-QGDEFQETADEATILGSKYNEGEIAI-VKEHIEN-LRSFNVPENSIGVISPYNAQVSH 581
Query: 111 LQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNH-GVGFVADIRRMNVALT 169
L+ + L D+ I+TVD FQG+E+DVII+S VR++ VGF+ + RR+NVA+T
Sbjct: 582 LKKLIHDELKLT---DIEISTVDGFQGREKDVIILSLVRSNEKFEVGFLKEERRLNVAMT 638
Query: 170 RARRALWVMGNAGAL 184
R RR L V+GN L
Sbjct: 639 RPRRQLVVVGNIEVL 653
>MGI|MGI:97054 [details] [associations]
symbol:Mov10 "Moloney leukemia virus 10" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISO] InterPro:IPR003593 SMART:SM00382
MGI:MGI:97054 GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
HOVERGEN:HBG052500 EMBL:X52574 EMBL:AK004542 EMBL:BC053743
EMBL:X75819 IPI:IPI00130328 PIR:A39611 RefSeq:NP_001156912.1
RefSeq:NP_001156913.1 RefSeq:NP_032645.2 UniGene:Mm.1597
ProteinModelPortal:P23249 SMR:P23249 DIP:DIP-48575N STRING:P23249
PhosphoSite:P23249 PaxDb:P23249 PRIDE:P23249
Ensembl:ENSMUST00000168015 GeneID:17454 KEGG:mmu:17454
NextBio:292100 Bgee:P23249 Genevestigator:P23249
GermOnline:ENSMUSG00000002227 Uniprot:P23249
Length = 1004
Score = 243 (90.6 bits), Expect = 8.0e-18, P = 8.0e-18
Identities = 78/271 (28%), Positives = 126/271 (46%)
Query: 7 YRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPY-VFFDVIHGRESHRGGS 65
YR HP I D P++ +Y G L V++ ++ + + + F + G++ G S
Sbjct: 733 YRSHPTILDIPNQLYYDGELQACADVVDRERFCRWEGLPQQGFPIIFHGVMGKDEREGNS 792
Query: 66 VSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT---VGIITPYKLQLK----CLQHEFRNV 118
S+ N +EA + L G +++ VG+I+PY+ Q++ C+ R +
Sbjct: 793 PSFFNPEEAATVTSYLKQLLAPSSKKGKARLSPRNVGVISPYRKQVEKIRYCITKLDREL 852
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS--------NHGVGFVADIRRMNVALTR 170
++ KDL + +V+ FQGQER VI++S VR+S + +GF+ + +R NVA+TR
Sbjct: 853 RGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPKRFNVAVTR 912
Query: 171 ARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQG- 229
A+ L V+GN L DW + K Y P F L + G LQG
Sbjct: 913 AKALLIVVGNPLLLGHDPDWKTFLEFCKENGGYT---GCP--FPAKLDLQQ-GQDLLQGL 966
Query: 230 -KIPHNARGLRSAGQRHRSFDMNMESRSGTP 259
K+ + G R RH++ E G P
Sbjct: 967 SKLSPSTSGPR----RHQNLPQEREGEGGLP 993
>RGD|2322000 [details] [associations]
symbol:LOC100363957 "hypothetical protein LOC100363957"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 RGD:2322000
GO:GO:0008270 GeneTree:ENSGT00550000074391 IPI:IPI00777941
Ensembl:ENSRNOT00000014695 Uniprot:F1M404
Length = 919
Score = 241 (89.9 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 76/222 (34%), Positives = 112/222 (50%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR--PYVFFDVIHGRES 60
L QYR HP I + FY+G L + S + PVL P + F + G E
Sbjct: 690 LRTQYRCHPVISAIANDLFYEGNLVNGISERE-------RSPVLEWLPTLCFYNVTGTEQ 742
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV-L 119
+ S+ NV EA F + L ++L + GL +G+IT YK Q+ + V +
Sbjct: 743 VEREN-SFVNVAEAAFTLKLI----RSLIASGLEGSMIGVITLYKSQMYKICSLLSAVDV 797
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMG 179
+ + K + ++TVDAFQG E+++II+SCVR VGF+ +RMNVALTR RR L ++G
Sbjct: 798 DHPDVKAVEVSTVDAFQGAEKEIIILSCVRTRQ--VGFIDSEKRMNVALTRGRRHLLIIG 855
Query: 180 NAGALTQSDDWAALIADSKARN--------CYMDMDSLPKEF 213
+ L ++ W +I K R C +D L KE+
Sbjct: 856 SLSCLRKNQLWGRVIQHCKGREDGLQHASQCEPQLDRLLKEY 897
>UNIPROTKB|F1SBP9 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035279 "mRNA cleavage involved in gene silencing by
miRNA" evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] GO:GO:0000932 GO:GO:0035279 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
OMA:VRFFKLD EMBL:CU861480 RefSeq:XP_003481536.1 UniGene:Ssc.19573
Ensembl:ENSSSCT00000007422 GeneID:100521086 KEGG:ssc:100521086
Uniprot:F1SBP9
Length = 1001
Score = 240 (89.5 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 64/213 (30%), Positives = 108/213 (50%)
Query: 7 YRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPY-VFFDVIHGRESHRGGS 65
YR HP I D P++ +Y+G L V++ ++ + + + F + G++ G S
Sbjct: 732 YRSHPTILDIPNQLYYEGELQACADVVDRERFCRWEGLPRQGFPIIFHGVMGKDEREGNS 791
Query: 66 VSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT---VGIITPYKLQLKCLQHEFRNVLNSE 122
S+ N +EA + L + G +++ VG+I+PY+ Q++ ++H +
Sbjct: 792 PSFFNPEEAATVTSYLKQLLTSSSKKGKARLSPRSVGVISPYRKQVEKIRHCITKLDKEL 851
Query: 123 EG----KDLYINTVDAFQGQERDVIIMSCVRAS--------NHGVGFVADIRRMNVALTR 170
G KDL + +V+ FQGQER VI++S VR+S + +GF+ + +R NVA+TR
Sbjct: 852 RGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPKRFNVAVTR 911
Query: 171 ARRALWVMGNAGALTQSDDWAALIADSKARNCY 203
A+ L V+GN L DW A + K Y
Sbjct: 912 AKALLIVVGNPLLLGHDPDWKAFLEFCKENGGY 944
>RGD|1598327 [details] [associations]
symbol:Mov10 "Moloney leukemia virus 10" species:10116 "Rattus
norvegicus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IEA;ISO] InterPro:IPR003593 SMART:SM00382
RGD:1598327 GO:GO:0005524 GO:GO:0017111 GO:GO:0000932 GO:GO:0035279
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:CH474015 OrthoDB:EOG4SXNC4
CTD:4343 IPI:IPI00192859 RefSeq:NP_001101181.1 UniGene:Rn.3508
Ensembl:ENSRNOT00000018061 GeneID:310756 KEGG:rno:310756
UCSC:RGD:1598327 NextBio:662562 Uniprot:D3ZUC2
Length = 1004
Score = 240 (89.5 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 78/271 (28%), Positives = 124/271 (45%)
Query: 7 YRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPY-VFFDVIHGRESHRGGS 65
YR HP I D P++ +Y G L V++ ++ + + + F + G++ G S
Sbjct: 733 YRSHPTILDIPNQLYYDGELQACADVVDRERFCRWEGLPQQGFPIIFHGVMGKDEREGNS 792
Query: 66 VSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT---VGIITPYKLQLK----CLQHEFRNV 118
S+ N +EA L G +++ VG+I+PY+ Q++ C+ R +
Sbjct: 793 PSFFNPEEAATVTSYLRQLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRYCITKLDREL 852
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS--------NHGVGFVADIRRMNVALTR 170
++ KDL + +V+ FQGQER VI++S VR+S + +GF+ + +R NVA+TR
Sbjct: 853 RGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPKRFNVAVTR 912
Query: 171 ARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQG- 229
A+ L V+GN L DW + K Y P F L + G LQG
Sbjct: 913 AKALLIVVGNPLLLGHDPDWKTFLEFCKENGGYT---GCP--FPAKLDLQQ-GQDLLQGL 966
Query: 230 -KIPHNARGLRSAGQRHRSFDMNMESRSGTP 259
K+ + G R RH+ E G P
Sbjct: 967 SKLSPSTSGPR----RHQRLPQEREGEEGLP 993
>CGD|CAL0006154 [details] [associations]
symbol:orf19.6199 species:5476 "Candida albicans" [GO:0043141
"ATP-dependent 5'-3' DNA helicase activity" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IEA] [GO:0033203 "DNA helicase
A complex" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR004483 SMART:SM00382
CGD:CAL0006154 GO:GO:0005524 GO:GO:0003677 GO:GO:0017111
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 EMBL:AACQ01000038
EMBL:AACQ01000037 TIGRFAMs:TIGR00376 RefSeq:XP_718706.1
RefSeq:XP_718790.1 ProteinModelPortal:Q5AAW1 STRING:Q5AAW1
GeneID:3639532 GeneID:3639630 KEGG:cal:CaO19.13579
KEGG:cal:CaO19.6199 Uniprot:Q5AAW1
Length = 719
Score = 239 (89.2 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 71/216 (32%), Positives = 122/216 (56%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESV--INLPD--EVYYKDPVLRPYVFFDVIHG 57
LL VQYRM+ I FPS Y +L +SV I+L D V D + +++D G
Sbjct: 487 LLDVQYRMNKSIMQFPSMQLYDNQLKCDDSVREISLVDLPGVEINDDTMTKCIWYDTQGG 546
Query: 58 RESHRGGSVSYQNVD-EAKFG----VCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQ 112
+ +S +++D ++K+ + + H++K L S G+ +G+I PY Q++ L+
Sbjct: 547 EFPEQ---IS-ESIDGDSKYNDMELLVVKGHIKKLLSS-GVQPQDIGVIAPYSAQVQNLK 601
Query: 113 HEFR---NVLNSEEG-KD--LYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMN 165
+ V +S G KD + I+TVD FQG+E++VII++ VR+++ +GF+++ RR+N
Sbjct: 602 KQMGLGGEVGSSANGDKDGQIEISTVDGFQGREKEVIILTLVRSNDSREIGFLSEQRRLN 661
Query: 166 VALTRARRALWVMGNAGALTQSDD-----WAALIAD 196
VA+TR +R L V+G+ + QS + W+ + D
Sbjct: 662 VAMTRPKRQLCVVGDLELMNQSGNKFLQSWSKFVED 697
Score = 37 (18.1 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 283 LDDFDQSGEKYRDAW----QHGIXXXXXXXXXXXPRLEDLVD 320
L+ +QSG K+ +W + G P L+D ++
Sbjct: 677 LELMNQSGNKFLQSWSKFVEDGNNDGDVIFEIEYPNLDDYIE 718
>UNIPROTKB|Q5AAW1 [details] [associations]
symbol:HCS1 "Putative uncharacterized protein HCS1"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR004483 SMART:SM00382 CGD:CAL0006154 GO:GO:0005524
GO:GO:0003677 GO:GO:0017111 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:AACQ01000038 EMBL:AACQ01000037
TIGRFAMs:TIGR00376 RefSeq:XP_718706.1 RefSeq:XP_718790.1
ProteinModelPortal:Q5AAW1 STRING:Q5AAW1 GeneID:3639532
GeneID:3639630 KEGG:cal:CaO19.13579 KEGG:cal:CaO19.6199
Uniprot:Q5AAW1
Length = 719
Score = 239 (89.2 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 71/216 (32%), Positives = 122/216 (56%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESV--INLPD--EVYYKDPVLRPYVFFDVIHG 57
LL VQYRM+ I FPS Y +L +SV I+L D V D + +++D G
Sbjct: 487 LLDVQYRMNKSIMQFPSMQLYDNQLKCDDSVREISLVDLPGVEINDDTMTKCIWYDTQGG 546
Query: 58 RESHRGGSVSYQNVD-EAKFG----VCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQ 112
+ +S +++D ++K+ + + H++K L S G+ +G+I PY Q++ L+
Sbjct: 547 EFPEQ---IS-ESIDGDSKYNDMELLVVKGHIKKLLSS-GVQPQDIGVIAPYSAQVQNLK 601
Query: 113 HEFR---NVLNSEEG-KD--LYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMN 165
+ V +S G KD + I+TVD FQG+E++VII++ VR+++ +GF+++ RR+N
Sbjct: 602 KQMGLGGEVGSSANGDKDGQIEISTVDGFQGREKEVIILTLVRSNDSREIGFLSEQRRLN 661
Query: 166 VALTRARRALWVMGNAGALTQSDD-----WAALIAD 196
VA+TR +R L V+G+ + QS + W+ + D
Sbjct: 662 VAMTRPKRQLCVVGDLELMNQSGNKFLQSWSKFVED 697
Score = 37 (18.1 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 283 LDDFDQSGEKYRDAW----QHGIXXXXXXXXXXXPRLEDLVD 320
L+ +QSG K+ +W + G P L+D ++
Sbjct: 677 LELMNQSGNKFLQSWSKFVEDGNNDGDVIFEIEYPNLDDYIE 718
>UNIPROTKB|Q0V8H6 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9913 "Bos
taurus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391
HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 EMBL:BT026242 EMBL:BC148151
IPI:IPI00691419 RefSeq:NP_001069307.1 UniGene:Bt.2939
ProteinModelPortal:Q0V8H6 STRING:Q0V8H6 Ensembl:ENSBTAT00000018997
GeneID:523206 KEGG:bta:523206 CTD:4343 InParanoid:Q0V8H6
OMA:VRFFKLD NextBio:20873687 Uniprot:Q0V8H6
Length = 1003
Score = 238 (88.8 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 74/252 (29%), Positives = 121/252 (48%)
Query: 7 YRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPY-VFFDVIHGRESHRGGS 65
YR HP I D P+R +Y G L V++ ++ + + + F + G++ G S
Sbjct: 732 YRSHPTILDVPNRLYYDGELQACADVVDRERFCRWEGLPRQDFPIIFHGVMGKDEREGNS 791
Query: 66 VSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT---VGIITPYKLQLK----CLQHEFRNV 118
S+ N +EA + L G +++ VG+I+PY+ Q++ C+ + +
Sbjct: 792 PSFFNPEEAATVTSYLKQLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRYCITKLDKQL 851
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS--------NHGVGFVADIRRMNVALTR 170
++ KDL + +V+ FQGQER VI++S VR+S + +GF+ + +R NVA+TR
Sbjct: 852 RGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPKRFNVAVTR 911
Query: 171 ARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQG- 229
A+ L V+GN L DW + K Y P F L + G LQG
Sbjct: 912 AKALLIVVGNPLLLGHDPDWKVFLEFCKENGGYT---GCP--FPAKLDLQQ-GQNLLQGL 965
Query: 230 -KIPHNARGLRS 240
K+ + GL+S
Sbjct: 966 SKLSPSTSGLKS 977
>ZFIN|ZDB-GENE-091230-8 [details] [associations]
symbol:mov10a "Moloney leukemia virus 10, homolog, a"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 ZFIN:ZDB-GENE-091230-8
GO:GO:0005524 GO:GO:0017111 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 EMBL:CU469362
IPI:IPI00481619 RefSeq:XP_002662576.2 UniGene:Dr.155704
Ensembl:ENSDART00000064826 GeneID:566858 KEGG:dre:566858 CTD:566858
NextBio:20888414 Bgee:E7FAV9 Uniprot:E7FAV9
Length = 1001
Score = 236 (88.1 bits), Expect = 5.9e-17, P = 5.9e-17
Identities = 69/216 (31%), Positives = 111/216 (51%)
Query: 7 YRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYK-DPVLR---PYVFFDVIHGRESHR 62
YR HP I P+ FY+ L + + E + + + + R P VF V+ G++
Sbjct: 748 YRSHPAILKIPNELFYENELQVFAN--QMEREAFCQWEHLPRKGFPVVFHGVM-GKDERE 804
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKV---TVGIITPYKLQLKCLQHEFRNVL 119
S S+ NV E + V +L +T GL K+ +GII PY+ Q++ ++ V
Sbjct: 805 ANSPSFFNVTEIEVIVNYLNNLMQTQGKKGLPKLGPNDIGIIAPYRKQVEKIRKALNTVG 864
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NH-------GVGFVADIRRMNVALTRA 171
++ KD+ + +V+ FQGQER VII+S VR+S N+ +GF+++ +R NVA+TRA
Sbjct: 865 ELKKWKDIKVGSVEEFQGQERKVIIVSTVRSSVNYVKMDQDFNIGFLSNEKRFNVAMTRA 924
Query: 172 RRALWVMGNAGALTQSDDWAALIADSKARNCYMDMD 207
+ L V+GN L++ W I + Y D
Sbjct: 925 KGLLIVVGNPVILSKDPTWQKFIQYCEQEQGYTGFD 960
>UNIPROTKB|J9P7Z9 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:AAEX03011080 EMBL:AAEX03011081
Ensembl:ENSCAFT00000044224 Uniprot:J9P7Z9
Length = 983
Score = 235 (87.8 bits), Expect = 7.5e-17, P = 7.5e-17
Identities = 63/213 (29%), Positives = 107/213 (50%)
Query: 7 YRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPY-VFFDVIHGRESHRGGS 65
YR HP I D P++ +Y+G L V++ +++ + + + F + G++ G S
Sbjct: 712 YRSHPTILDIPNQLYYEGELQACADVVDRERFCHWEGLPRQGFPIIFHGVMGKDEREGNS 771
Query: 66 VSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT---VGIITPYKLQLKCLQHEFRNVLNSE 122
S+ N +EA + L G +++ VG+I+PY+ Q++ ++H +
Sbjct: 772 PSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRHCITKLDKEL 831
Query: 123 EG----KDLYINTVDAFQGQERDVIIMSCVRAS--------NHGVGFVADIRRMNVALTR 170
G KDL + +V+ FQGQER VI++S VR+S + +GF+ + +R NVA+TR
Sbjct: 832 RGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPKRFNVAVTR 891
Query: 171 ARRALWVMGNAGALTQSDDWAALIADSKARNCY 203
A+ L V+GN L DW + K Y
Sbjct: 892 AKALLIVVGNPLLLGHDPDWKVFLEFCKENGGY 924
>UNIPROTKB|F1P7T4 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035279 "mRNA cleavage involved in gene
silencing by miRNA" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GO:GO:0000932 GO:GO:0035279 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
OMA:VRFFKLD EMBL:AAEX03011080 EMBL:AAEX03011081 RefSeq:XP_540337.3
Ensembl:ENSCAFT00000021339 GeneID:483219 KEGG:cfa:483219
Uniprot:F1P7T4
Length = 1003
Score = 235 (87.8 bits), Expect = 7.8e-17, P = 7.8e-17
Identities = 63/213 (29%), Positives = 107/213 (50%)
Query: 7 YRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPY-VFFDVIHGRESHRGGS 65
YR HP I D P++ +Y+G L V++ +++ + + + F + G++ G S
Sbjct: 732 YRSHPTILDIPNQLYYEGELQACADVVDRERFCHWEGLPRQGFPIIFHGVMGKDEREGNS 791
Query: 66 VSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT---VGIITPYKLQLKCLQHEFRNVLNSE 122
S+ N +EA + L G +++ VG+I+PY+ Q++ ++H +
Sbjct: 792 PSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRHCITKLDKEL 851
Query: 123 EG----KDLYINTVDAFQGQERDVIIMSCVRAS--------NHGVGFVADIRRMNVALTR 170
G KDL + +V+ FQGQER VI++S VR+S + +GF+ + +R NVA+TR
Sbjct: 852 RGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPKRFNVAVTR 911
Query: 171 ARRALWVMGNAGALTQSDDWAALIADSKARNCY 203
A+ L V+GN L DW + K Y
Sbjct: 912 AKALLIVVGNPLLLGHDPDWKVFLEFCKENGGY 944
>UNIPROTKB|Q9HCE1 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IDA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IDA] [GO:0005829 "cytosol" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006355 GO:GO:0007219 GO:GO:0006351
GO:GO:0003723 GO:GO:0004386 GO:GO:0000932 GO:GO:0035279
eggNOG:COG1112 InterPro:IPR026122 PANTHER:PTHR10887:SF17
EMBL:AL603832 HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 CTD:4343
OMA:VRFFKLD EMBL:AB046851 EMBL:AK074174 EMBL:AL833353 EMBL:BC002548
EMBL:BC004499 EMBL:BC009312 IPI:IPI00444452 IPI:IPI00444454
IPI:IPI00929442 RefSeq:NP_001123551.1 RefSeq:NP_066014.1
UniGene:Hs.514941 ProteinModelPortal:Q9HCE1 SMR:Q9HCE1
DIP:DIP-44158N IntAct:Q9HCE1 STRING:Q9HCE1 PhosphoSite:Q9HCE1
DMDM:24638063 PaxDb:Q9HCE1 PRIDE:Q9HCE1 DNASU:4343
Ensembl:ENST00000357443 Ensembl:ENST00000369645
Ensembl:ENST00000413052 Ensembl:ENST00000544796 GeneID:4343
KEGG:hsa:4343 UCSC:uc001eck.3 GeneCards:GC01P113215 HGNC:HGNC:7200
MIM:610742 neXtProt:NX_Q9HCE1 PharmGKB:PA30908 HOVERGEN:HBG052500
InParanoid:Q9HCE1 PhylomeDB:Q9HCE1 ChiTaRS:MOV10 GenomeRNAi:4343
NextBio:17098 ArrayExpress:Q9HCE1 Bgee:Q9HCE1 CleanEx:HS_MOV10
Genevestigator:Q9HCE1 GermOnline:ENSG00000155363 Uniprot:Q9HCE1
Length = 1003
Score = 230 (86.0 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 62/213 (29%), Positives = 106/213 (49%)
Query: 7 YRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPY-VFFDVIHGRESHRGGS 65
YR HP I D P++ +Y+G L V++ + + + + F + G++ G S
Sbjct: 732 YRSHPTILDIPNQLYYEGELQACADVVDRERFCRWAGLPRQGFPIIFHGVMGKDEREGNS 791
Query: 66 VSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT---VGIITPYKLQLK----CLQHEFRNV 118
S+ N +EA + L G +++ VG+I+PY+ Q++ C+ R +
Sbjct: 792 PSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRYCITKLDREL 851
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS--------NHGVGFVADIRRMNVALTR 170
++ KDL + +V+ FQGQER VI++S VR+S + +GF+ + +R NVA+TR
Sbjct: 852 RGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPKRFNVAVTR 911
Query: 171 ARRALWVMGNAGALTQSDDWAALIADSKARNCY 203
A+ L ++GN L DW + K Y
Sbjct: 912 AKALLIIVGNPLLLGHDPDWKVFLEFCKENGGY 944
>POMBASE|SPCC737.07c [details] [associations]
symbol:SPCC737.07c "DNA polymerase alpha-associated DNA
helicase A (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006273
"lagging strand elongation" evidence=ISO] [GO:0033203 "DNA helicase
A complex" evidence=ISO] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=ISO] [GO:0043596 "nuclear replication
fork" evidence=IC] [GO:0005658 "alpha DNA polymerase:primase
complex" evidence=ISO] InterPro:IPR003593 SMART:SM00382
PomBase:SPCC737.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG1112 GO:GO:0006273
GO:GO:0043141 PIR:T41580 RefSeq:NP_588369.1
ProteinModelPortal:O94247 STRING:O94247 EnsemblFungi:SPCC737.07c.1
GeneID:2539412 KEGG:spo:SPCC737.07c HOGENOM:HOG000185831
OMA:ERTIFLE OrthoDB:EOG444PTN NextBio:20800576 GO:GO:0033203
Uniprot:O94247
Length = 660
Score = 225 (84.3 bits), Expect = 6.2e-16, P = 6.2e-16
Identities = 66/215 (30%), Positives = 111/215 (51%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN--LPDEVYYKDPVLR--PYVFFDVIHG- 57
L++QYRMH I FPS FY +L +E V L D ++ L P F+D +
Sbjct: 447 LNIQYRMHELISKFPSDTFYDSKLVPAEEVKKRLLMDLENVEETELTDSPIYFYDTLGNY 506
Query: 58 RESHRGGSVS--YQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF 115
+E R + YQ+ + + + L GL + ++TPY Q+ +
Sbjct: 507 QEDDRSEDMQNFYQDSKSNHWEAQIVSYHISGLLEAGLEAKDIAVVTPYNAQVALI---- 562
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVGFVADIRRMNVALTRARRA 174
R +L E+G ++ + +VD QG+E++ II S VR+++ VGF+A+ RR+NVA+TR +R
Sbjct: 563 RQLLK-EKGIEVEMGSVDKVQGREKEAIIFSLVRSNDVREVGFLAEKRRLNVAITRPKRH 621
Query: 175 LWVMGNAGALTQSDDWAALIADSKARNCY-MDMDS 208
L V+G++ + + ++ D N MD+D+
Sbjct: 622 LCVIGDSNTVKWASEFFHQWVDFLEENAIVMDIDA 656
>TAIR|locus:2200996 [details] [associations]
symbol:SDE3 "SILENCING DEFECTIVE" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0009616
"virus induced gene silencing" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0035194 "posttranscriptional gene
silencing by RNA" evidence=IMP] InterPro:IPR026127 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005737
eggNOG:COG1112 EMBL:AC005106 GO:GO:0003724 GO:GO:0035194
GO:GO:0009616 HOGENOM:HOG000239755 EMBL:AF339908 EMBL:AK117698
IPI:IPI00521883 PIR:C86189 RefSeq:NP_172037.1 UniGene:At.15329
UniGene:At.42398 ProteinModelPortal:Q8GYD9 SMR:Q8GYD9 STRING:Q8GYD9
PaxDb:Q8GYD9 PRIDE:Q8GYD9 EnsemblPlants:AT1G05460.1 GeneID:837047
KEGG:ath:AT1G05460 GeneFarm:2423 TAIR:At1g05460 InParanoid:Q8GYD9
OMA:DEREGNN PhylomeDB:Q8GYD9 ProtClustDB:CLSN2682016
Genevestigator:Q8GYD9 GermOnline:AT1G05460 PANTHER:PTHR10887:SF165
Uniprot:Q8GYD9
Length = 1002
Score = 225 (84.3 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 83/304 (27%), Positives = 152/304 (50%)
Query: 7 YRMHPHIRDFPSRHFYQGRLT----DSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
YR HP I D PS+ FY G L D++SV+ + + K+ P VF+ I G +
Sbjct: 621 YRCHPEILDLPSKLFYDGELVASKEDTDSVLASLNFLPNKE---FPMVFYG-IQGCDERE 676
Query: 63 GGSVSYQN-VDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
G + S+ N ++ +K + E +++ + + + +G+ITPY+ Q+ + + VL+
Sbjct: 677 GNNPSWFNRIEISK----VIETIKRLTANDCVQEEDIGVITPYRQQVM----KIKEVLDR 728
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHG-------VGFVADIRRMNVALTRARR 173
+ ++ + +V+ FQGQE+ VII+S VR++ H +GF+++ RR NVA+TRA
Sbjct: 729 LDMTEVKVGSVEQFQGQEKQVIIISTVRSTIKHNEFDRAYCLGFLSNPRRFNVAITRAIS 788
Query: 174 ALWVMGNAGALTQSDDWAALI---ADSKA-RNCYM-DMDSLPKE-FSVALAAKAPGYGPL 227
L ++GN + + +W L+ D+ A + C + + + +E F ++ P Y P
Sbjct: 789 LLVIIGNPHIICKDMNWNKLLWRCVDNNAYQGCGLPEQEEFVEEPFKQEGSSNGPQYPP- 847
Query: 228 QGKIPHNARGLRSAGQRHRS-FDMNMESRSGTPSEDDEKVSRNGNYRPFKPPLENSLDDF 286
+ + +N+ L + G + + GT +++ N N K E S D +
Sbjct: 848 EAEW-NNSGELNNGGANENGEWSDGWNNNGGTKEKNEWSDGWNSNGGGTKKKDEWS-DGW 905
Query: 287 DQSG 290
D +G
Sbjct: 906 DNNG 909
>UNIPROTKB|F1RY71 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051260 "protein homooligomerization" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0032797 "SMN complex" evidence=IEA] [GO:0032575 "ATP-dependent
5'-3' RNA helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000049 "tRNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0051260 GO:GO:0043022 GO:GO:0000049
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043141
GO:GO:0032797 GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:CU694814 RefSeq:XP_003122472.2
Ensembl:ENSSSCT00000014076 GeneID:100520173 KEGG:ssc:100520173
Uniprot:F1RY71
Length = 987
Score = 221 (82.9 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 86/277 (31%), Positives = 133/277 (48%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVI-----NLPDEVYYKDPVLRPYVFFDVIH 56
+L+VQYRMH I + S Y GRLT SV +LP ++ + P + D
Sbjct: 434 MLTVQYRMHQAIAQWASEALYHGRLTAHASVAGHLLRDLPGVAATEETGI-PLLLVDTAG 492
Query: 57 -GR-ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHE 114
G E S N E + V L H+Q L G+ V +ITPY LQ+ L+
Sbjct: 493 CGLFELEEEDEQSKGNPGEVRL-VRL--HVQ-ALVDAGVPAGDVAVITPYNLQVDLLRQS 548
Query: 115 FRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARR 173
++ +L I +VD FQG+E++ +I+S VR++ G VGF+A+ RR+NVA+TRARR
Sbjct: 549 L-----AQRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARR 603
Query: 174 ALWVMGNAGALTQSDDWAALIA----DSKARNCYMDMDSL-PKEFSVALAAKAPGYGPLQ 228
+ V+ ++ ++ L+A + R + +D L P+ +S A G+
Sbjct: 604 HVAVVCDSRTVSNHAFLKTLVAYFAEHGEVRTAFEYLDDLVPENYS---HEGAQGHSRAG 660
Query: 229 GKIPHNARGLRSA-GQRHRSFDM-NMESRSGTPSEDD 263
K +A R A G R + + GTPS+ +
Sbjct: 661 AKARGSAPPARRAPGSRQPAGARPGCKKPGGTPSDSE 697
>UNIPROTKB|E1BZJ8 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007281 "germ cell development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:AADN02050039 EMBL:AADN02050037
EMBL:AADN02050038 IPI:IPI00585215 Ensembl:ENSGALT00000013959
ArrayExpress:E1BZJ8 Uniprot:E1BZJ8
Length = 1192
Score = 221 (82.9 bits), Expect = 4.5e-15, P = 4.5e-15
Identities = 65/214 (30%), Positives = 110/214 (51%)
Query: 7 YRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPY-VFFDVIHGRESHRGGS 65
YR H + PS+ FY L + ++++ + + + F + G+E+ G S
Sbjct: 979 YRSHSALLALPSKLFYHKELEVCADTSVVSSLLHWEKLPRKGFPLIFHGVRGKETREGHS 1038
Query: 66 VSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSEEGK 125
S+ N EA + HL K +S+ + +G+ITPY+ Q++ + + +L S +
Sbjct: 1039 PSWFNPTEAVQVMQYCCHLAKN-ESIAVSVTDIGVITPYRKQVE----KIKFLLRSIDLS 1093
Query: 126 DLYINTVDAFQGQERDVIIMSCVRA-------SNHGVGFVADIRRMNVALTRARRALWVM 178
D+ + TV+ FQGQE V I+S VR+ + +GF+++ +R NVA+TRA+ L V+
Sbjct: 1094 DIKVGTVEEFQGQECMVTILSTVRSYEDTFAEEEYCLGFLSNPKRFNVAITRAKALLIVI 1153
Query: 179 GNAGALTQSDDWAALIADSKARNCYMDMDSLPKE 212
GN L + + AL+ S N Y+ D LP E
Sbjct: 1154 GNPHLLVKDPCFCALLEYSLMNNAYIGCD-LPSE 1186
>TAIR|locus:2056896 [details] [associations]
symbol:AT2G03270 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR004483
SMART:SM00382 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0004386 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:AC005313 EMBL:AC006284 HOGENOM:HOG000185831
TIGRFAMs:TIGR00376 UniGene:At.10455 UniGene:At.71239 EMBL:AY045820
EMBL:AY091361 IPI:IPI00521943 PIR:T02699 RefSeq:NP_565299.1
ProteinModelPortal:O81047 SMR:O81047 STRING:O81047 PaxDb:O81047
PRIDE:O81047 EnsemblPlants:AT2G03270.1 GeneID:814856
KEGG:ath:AT2G03270 TAIR:At2g03270 InParanoid:O81047 OMA:GHPSRVS
PhylomeDB:O81047 ProtClustDB:CLSN2687941 ArrayExpress:O81047
Genevestigator:O81047 Uniprot:O81047
Length = 639
Score = 216 (81.1 bits), Expect = 6.6e-15, P = 6.6e-15
Identities = 66/178 (37%), Positives = 97/178 (54%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN--LPD-EVYYKDPVLRPYVFFDVIHG- 57
+L+VQYRMH I ++ S+ Y ++T SV + L D E K + G
Sbjct: 431 MLTVQYRMHELIMNWSSKELYDNKITAHSSVASHMLFDLENVTKSSSTEATLLLVDTAGC 490
Query: 58 -RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFR 116
E + S N EA+ + H ++ ++S G+ +GIITPY Q+ L+ R
Sbjct: 491 DMEEKKDEEESTYNEGEAEVAMA---HAKRLMES-GVQPSDIGIITPYAAQVMLLRI-LR 545
Query: 117 NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRA-SNHGVGFVADIRRMNVALTRARR 173
E+ KD+ I+TVD FQG+E++ II+S VR+ S VGF+ D RRMNVA+TR+RR
Sbjct: 546 G--KEEKLKDMEISTVDGFQGREKEAIIISMVRSNSKKEVGFLKDQRRMNVAVTRSRR 601
>GENEDB_PFALCIPARUM|MAL7P1.12 [details] [associations]
symbol:MAL7P1.12 "erythrocyte
membrane-associated antigen" species:5833 "Plasmodium falciparum"
[GO:0016020 "membrane" evidence=ISS] GO:GO:0016020
InterPro:IPR014001 SMART:SM00487 EMBL:AL844506
RefSeq:XP_001348968.1 ProteinModelPortal:Q8IC35 IntAct:Q8IC35
MINT:MINT-1611439 EnsemblProtists:MAL7P1.12:mRNA GeneID:2655186
KEGG:pfa:MAL7P1.12 EuPathDB:PlasmoDB:PF3D7_0703500
HOGENOM:HOG000283891 ProtClustDB:CLSZ2433351 Uniprot:Q8IC35
Length = 2283
Score = 222 (83.2 bits), Expect = 7.7e-15, P = 7.7e-15
Identities = 69/199 (34%), Positives = 107/199 (53%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRL-TDSESVINLP--DEVYYKDPVLRPYVFFDVIHGR 58
LL+ Q RMH I FP+ HFY +L T + + N P + +P R F DV G+
Sbjct: 1988 LLNTQRRMHLSICVFPNFHFYDNKLKTANVTEENRPIIKGFLWPNPKCR-LAFIDVSIGK 2046
Query: 59 ESHRGGSVSYQNV-DEAKFGVCLYEHLQKTLKSM-GLGKVTV---GIITPYKLQLKCLQH 113
GS ++N +KF + E L LKS+ G V+V GI+T Y Q L+
Sbjct: 2047 P----GS-KFENAYGTSKFNLYEIEPLITVLKSIINEGCVSVDEIGILTAYDAQKMKLKK 2101
Query: 114 EFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRAR 172
++ + E + I+++D FQG+E+D+I+ S VR++ N+ +GF+ D RR+NV LTRA+
Sbjct: 2102 AVQDAFSYEASHRIEIDSIDGFQGKEKDLILFSAVRSNANNELGFLRDARRLNVMLTRAK 2161
Query: 173 RALWVMGNAGALTQSD-DW 190
R + + G+ L +W
Sbjct: 2162 RGVILFGDQFTLANDPANW 2180
>UNIPROTKB|Q8IC35 [details] [associations]
symbol:MAL7P1.12 "Erythrocyte membrane-associated antigen"
species:36329 "Plasmodium falciparum 3D7" [GO:0016020 "membrane"
evidence=ISS] GO:GO:0016020 InterPro:IPR014001 SMART:SM00487
EMBL:AL844506 RefSeq:XP_001348968.1 ProteinModelPortal:Q8IC35
IntAct:Q8IC35 MINT:MINT-1611439 EnsemblProtists:MAL7P1.12:mRNA
GeneID:2655186 KEGG:pfa:MAL7P1.12 EuPathDB:PlasmoDB:PF3D7_0703500
HOGENOM:HOG000283891 ProtClustDB:CLSZ2433351 Uniprot:Q8IC35
Length = 2283
Score = 222 (83.2 bits), Expect = 7.7e-15, P = 7.7e-15
Identities = 69/199 (34%), Positives = 107/199 (53%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRL-TDSESVINLP--DEVYYKDPVLRPYVFFDVIHGR 58
LL+ Q RMH I FP+ HFY +L T + + N P + +P R F DV G+
Sbjct: 1988 LLNTQRRMHLSICVFPNFHFYDNKLKTANVTEENRPIIKGFLWPNPKCR-LAFIDVSIGK 2046
Query: 59 ESHRGGSVSYQNV-DEAKFGVCLYEHLQKTLKSM-GLGKVTV---GIITPYKLQLKCLQH 113
GS ++N +KF + E L LKS+ G V+V GI+T Y Q L+
Sbjct: 2047 P----GS-KFENAYGTSKFNLYEIEPLITVLKSIINEGCVSVDEIGILTAYDAQKMKLKK 2101
Query: 114 EFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRAR 172
++ + E + I+++D FQG+E+D+I+ S VR++ N+ +GF+ D RR+NV LTRA+
Sbjct: 2102 AVQDAFSYEASHRIEIDSIDGFQGKEKDLILFSAVRSNANNELGFLRDARRLNVMLTRAK 2161
Query: 173 RALWVMGNAGALTQSD-DW 190
R + + G+ L +W
Sbjct: 2162 RGVILFGDQFTLANDPANW 2180
>ZFIN|ZDB-GENE-060526-371 [details] [associations]
symbol:mov10b.2 "Moloney leukemia virus 10,
homolog, b.2" species:7955 "Danio rerio" [GO:0000932 "cytoplasmic
mRNA processing body" evidence=ISS] [GO:0035279 "mRNA cleavage
involved in gene silencing by miRNA" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] ZFIN:ZDB-GENE-060526-371
GO:GO:0005524 GO:GO:0003723 GO:GO:0004386 GO:GO:0000932
GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 EMBL:BX323059
HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 IPI:IPI00611260
RefSeq:NP_001037805.1 UniGene:Dr.94434 ProteinModelPortal:Q1LXK5
Ensembl:ENSDART00000078491 GeneID:555950 KEGG:dre:555950 CTD:555950
InParanoid:Q1LXK5 NextBio:20881245 Uniprot:Q1LXK5
Length = 1015
Score = 216 (81.1 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 61/207 (29%), Positives = 103/207 (49%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPY-VFFDVIHGRESH 61
L + YR HP+I + P+R FY G L I+ ++ + + V F + G++
Sbjct: 755 LIMNYRSHPYILEVPNRLFYDGELKACADEISSNQYCMWEHLPSKGFPVIFHGVPGKDER 814
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKV---TVGIITPYKLQLKCLQHEFRNV 118
S S+ N+ E V + L T G+ ++ +GII PY+ Q++ ++
Sbjct: 815 ESNSPSFFNIYEINILVDYLKKLLLTQPKKGISRIFPKDIGIIAPYRKQVEKIKRAIDAD 874
Query: 119 LNSEE--GKD-LYINTVDAFQGQERDVIIMSCVRAS--------NHGVGFVADIRRMNVA 167
+ ++ G D L + +V+ FQGQER VI++S VR+S +GF+ + +R NVA
Sbjct: 875 KDFQDYMGIDNLKVGSVEEFQGQERKVIMVSTVRSSVKYISLDETFNIGFLKNEKRFNVA 934
Query: 168 LTRARRALWVMGNAGALTQSDDWAALI 194
+TRA+ L ++GN L + W I
Sbjct: 935 VTRAKSLLIMVGNPMILRTDESWGRFI 961
>DICTYBASE|DDB_G0271732 [details] [associations]
symbol:DDB_G0271732 "AN1-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0032508 "DNA duplex unwinding"
evidence=ISS] [GO:0003678 "DNA helicase activity" evidence=ISS]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51061
SMART:SM00382 dictyBase:DDB_G0271732 GO:GO:0005524 GO:GO:0003677
GO:GO:0008270 EMBL:AAFI02000006 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0003678 TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10
OMA:HARQRIS RefSeq:XP_645520.1 ProteinModelPortal:Q75JA0
PRIDE:Q75JA0 EnsemblProtists:DDB0232283 GeneID:8618149
KEGG:ddi:DDB_G0271732 InParanoid:Q75JA0 ProtClustDB:CLSZ2846906
Uniprot:Q75JA0
Length = 1024
Score = 216 (81.1 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 68/226 (30%), Positives = 114/226 (50%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN----LPDEVYYKDPVLR--PYVFFDVI 55
LL+VQYRM+ I D+ S FY ++ +SV N D ++ + P + D
Sbjct: 486 LLNVQYRMNHKIMDWSSMEFYNSKMIADKSVSNHLLVTGDSPKIRNTLTTTCPLLMIDT- 544
Query: 56 HGRESHRGGSVSYQNVDEAKFG----VCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL 111
G + S + E+KF + + H++K ++ G+ +G+ITPY Q+K L
Sbjct: 545 SGCDMEE----SQDDEGESKFNNGEVIVVKRHIEKLIEC-GVKPNDIGVITPYNGQVKLL 599
Query: 112 QHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASN---HGVGFVADIRRMNVAL 168
+ +S E I TVD FQG+E+DVII+S VR++ H VGF+ + RR NVA+
Sbjct: 600 KSYLSKKYSSME-----IGTVDGFQGREKDVIIISMVRSNTDAPHKVGFLTEDRRTNVAI 654
Query: 169 TRARRALWVMGNAGALTQSDDWAALIADSKARNCYMD-MDSLPKEF 213
TRAR+ + V+ + ++ + ++ K + ++ + EF
Sbjct: 655 TRARKHVVVVCDTDTISSHEPLKRMVDYFKLNGLFRSALEYIEDEF 700
>UNIPROTKB|Q8QHA5 [details] [associations]
symbol:dna2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:8355 "Xenopus laevis" [GO:0000076
"DNA replication checkpoint" evidence=ISS] [GO:0000729 "DNA
double-strand break processing" evidence=ISS] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0004518 "nuclease activity" evidence=ISS]
[GO:0006260 "DNA replication" evidence=ISS] [GO:0006264
"mitochondrial DNA replication" evidence=ISS] [GO:0006284
"base-excision repair" evidence=ISS] [GO:0016890 "site-specific
endodeoxyribonuclease activity, specific for altered base"
evidence=ISS] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISS]
[GO:0033567 "DNA replication, Okazaki fragment processing"
evidence=ISS] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=ISS] [GO:0043139 "5'-3' DNA helicase activity"
evidence=ISS] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISS] [GO:0045740 "positive regulation of DNA
replication" evidence=ISS] [GO:0005760 "gamma DNA polymerase
complex" evidence=ISS] InterPro:IPR026851 InterPro:IPR014808
Pfam:PF08696 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0016890 GO:GO:0045740 GO:GO:0000729 GO:GO:0017108
GO:GO:0000076 GO:GO:0043137 GO:GO:0043139 GO:GO:0043142
GO:GO:0006264 PANTHER:PTHR10887:SF14 CTD:1763 HOVERGEN:HBG081456
KO:K10742 EMBL:AF474372 RefSeq:NP_001079231.1 UniGene:Xl.17390
ProteinModelPortal:Q8QHA5 GeneID:378492 KEGG:xla:378492
Xenbase:XB-GENE-5829000 Uniprot:Q8QHA5
Length = 1053
Score = 215 (80.7 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 80/231 (34%), Positives = 116/231 (50%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL---TD--SESVINLP---------------DEVYYK 42
L+VQYRM+ I ++ Y+GRL +D S +V+ LP + ++ K
Sbjct: 824 LTVQYRMNSKIMALSNKLVYEGRLECASDRVSNAVVQLPHIKTLLLELEFRESQESMWIK 883
Query: 43 DPVLRPY--VFF---DVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT 97
D VL P V F + I E+ G +S N EAK L HL K G
Sbjct: 884 D-VLEPSNPVCFLNTEKIPALETEEKGGIS--NWIEAK----LVFHLTKLYLKAGCRPSD 936
Query: 98 VGIITPYKLQLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VG 156
+GII PY+ QLK + + F NS + +NTVD +QG+++ VII+S VR++ G +G
Sbjct: 937 IGIIAPYRQQLKMISNYF----NSLSASAVEVNTVDKYQGRDKSVIIVSFVRSNIDGKLG 992
Query: 157 -FVADIRRMNVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDM 206
+ D RR+NVALTRA+ L ++G L + D LI + K N D+
Sbjct: 993 DLLKDWRRLNVALTRAKHKLIMLGCVPTLNRFDCLEQLICNLKTENQIYDL 1043
>UNIPROTKB|E2R760 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0032797 "SMN complex" evidence=IEA] [GO:0032575
"ATP-dependent 5'-3' RNA helicase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000049
"tRNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154 SMART:SM00382
SMART:SM00393 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0051260
GO:GO:0043022 GO:GO:0000049 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 GO:GO:0032797 GeneTree:ENSGT00700000104572
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575
PANTHER:PTHR10887:SF23 EMBL:AAEX03011604 Ensembl:ENSCAFT00000038980
NextBio:20858044 Uniprot:E2R760
Length = 992
Score = 212 (79.7 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 90/314 (28%), Positives = 144/314 (45%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVI-----NLPDEVYYKDPVLRPYVFFDVIH- 56
L+VQYRMH I + S Y G+LT SV +LP ++ + P + D
Sbjct: 437 LTVQYRMHQAIMRWASEALYHGQLTAHPSVAGHLLRDLPGVAATEETGI-PLLLVDTAGC 495
Query: 57 GR-ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF 115
G E S N E + V L H+Q L G+ + +ITPY LQ+ L+
Sbjct: 496 GLFELEDDDDQSKGNPGEVRL-VSL--HIQ-ALVDAGVQASDIAVITPYNLQVDLLRQSL 551
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRA 174
+ +L I +VD FQG+E++ +++S VR++ G VGF+A+ RR+NVA+TRARR
Sbjct: 552 -----AHRHPELEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRRINVAVTRARRH 606
Query: 175 LWVMGNAGALTQSDDWAALI----ADSKARNC--YMDMDSLPKEFSVALAAKAPGYGPLQ 228
+ V+ ++ ++ L+ + R Y+D D +P+ +S + G+G
Sbjct: 607 VAVVCDSRTVSNHAFLKTLVDHFTEHGEVRTAFEYLD-DIIPENYS---HESSQGHGQAG 662
Query: 229 GKIPHNARGLRSAGQRHRSFDMNME-SRSGTPSEDDEKVSRNGNYRPFKP--PLENSLDD 285
K P ++ L R + E ++ + E+ R G +P P P + SL+
Sbjct: 663 AK-PQSSAALSRKPPGSRPQEGAQEGAQEARAAAGLERKRRGG--KPSGPEVPSQPSLNG 719
Query: 286 FDQSGEKYRDAWQH 299
G RD H
Sbjct: 720 GSPEGAGSRDHADH 733
>UNIPROTKB|E2R8W1 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00154 SMART:SM00382 SMART:SM00393
GO:GO:0005524 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10
CTD:3508 OMA:HARQRIS PANTHER:PTHR10887:SF23 EMBL:AAEX03011604
RefSeq:XP_540807.2 Ensembl:ENSCAFT00000017093 GeneID:483686
KEGG:cfa:483686 Uniprot:E2R8W1
Length = 1010
Score = 212 (79.7 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 90/314 (28%), Positives = 144/314 (45%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVI-----NLPDEVYYKDPVLRPYVFFDVIH- 56
L+VQYRMH I + S Y G+LT SV +LP ++ + P + D
Sbjct: 437 LTVQYRMHQAIMRWASEALYHGQLTAHPSVAGHLLRDLPGVAATEETGI-PLLLVDTAGC 495
Query: 57 GR-ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF 115
G E S N E + V L H+Q L G+ + +ITPY LQ+ L+
Sbjct: 496 GLFELEDDDDQSKGNPGEVRL-VSL--HIQ-ALVDAGVQASDIAVITPYNLQVDLLRQSL 551
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRA 174
+ +L I +VD FQG+E++ +++S VR++ G VGF+A+ RR+NVA+TRARR
Sbjct: 552 -----AHRHPELEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRRINVAVTRARRH 606
Query: 175 LWVMGNAGALTQSDDWAALI----ADSKARNC--YMDMDSLPKEFSVALAAKAPGYGPLQ 228
+ V+ ++ ++ L+ + R Y+D D +P+ +S + G+G
Sbjct: 607 VAVVCDSRTVSNHAFLKTLVDHFTEHGEVRTAFEYLD-DIIPENYS---HESSQGHGQAG 662
Query: 229 GKIPHNARGLRSAGQRHRSFDMNME-SRSGTPSEDDEKVSRNGNYRPFKP--PLENSLDD 285
K P ++ L R + E ++ + E+ R G +P P P + SL+
Sbjct: 663 AK-PQSSAALSRKPPGSRPQEGAQEGAQEARAAAGLERKRRGG--KPSGPEVPSQPSLNG 719
Query: 286 FDQSGEKYRDAWQH 299
G RD H
Sbjct: 720 GSPEGAGSRDHADH 733
>FB|FBgn0035842 [details] [associations]
symbol:CG7504 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005875 "microtubule associated complex" evidence=IDA]
InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498 PROSITE:PS50006
SMART:SM00240 GO:GO:0005875 EMBL:AE014296 GO:GO:0006200
GO:GO:0016887 Gene3D:2.60.200.20 SUPFAM:SSF49879 eggNOG:COG1112
KO:K10706 GeneTree:ENSGT00580000081652 RefSeq:NP_001137907.1
UniGene:Dm.31993 ProteinModelPortal:B7Z0D7 SMR:B7Z0D7 STRING:B7Z0D7
PaxDb:B7Z0D7 EnsemblMetazoa:FBtr0273367 GeneID:38904
KEGG:dme:Dmel_CG7504 FlyBase:FBgn0035842 OMA:NRSKSCY
OrthoDB:EOG4DV42G GenomeRNAi:38904 NextBio:810939 Bgee:B7Z0D7
Uniprot:B7Z0D7
Length = 1676
Score = 209 (78.6 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 55/178 (30%), Positives = 93/178 (52%)
Query: 30 ESVINLPDEVYYKDPVLRPYVFFDVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLK 89
+ +IN + P++ PY ++ + +S+ + S N +EA+F L + K +
Sbjct: 1488 DQLINAECTARFASPLI-PYCVINLKYTCDSNGAQNKSISNNEEARFVAKLLTEMDKHMP 1546
Query: 90 SMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVR 149
S + + G+I+PY+ Q L + +N + TVD++QG E+DVII+S
Sbjct: 1547 SK---RFSYGLISPYQNQCYALSQVIPSHMN------ITPQTVDSYQGLEKDVIIIS--N 1595
Query: 150 ASNHGVGFVADIRRMNVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMD 207
A G GF+ + +R+NVALTR RR L + GN L + W L+ D++ R Y ++D
Sbjct: 1596 ARTRGCGFLTNYQRLNVALTRPRRCLVICGNFEDLKSVEMWRNLLDDARKRKVYFNLD 1653
Score = 164 (62.8 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 46/152 (30%), Positives = 79/152 (51%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
LS QYRMHP I +P+++FY+ +L ++E + P++ PY ++ + +S+
Sbjct: 1467 LSTQYRMHPEICRWPNQYFYEDQLINAECTAR------FASPLI-PYCVINLKYTCDSNG 1519
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSE 122
+ S N +EA+F L + K + S + + G+I+PY+ Q L + +N
Sbjct: 1520 AQNKSISNNEEARFVAKLLTEMDKHMPSK---RFSYGLISPYQNQCYALSQVIPSHMN-- 1574
Query: 123 EGKDLYINTVDAFQGQERDVIIMSCVRASNHG 154
+ TVD++QG E+DVII+S R G
Sbjct: 1575 ----ITPQTVDSYQGLEKDVIIISNARTRGCG 1602
>UNIPROTKB|F6QXW0 [details] [associations]
symbol:dna2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0000076 "DNA replication checkpoint" evidence=ISS]
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0004518 "nuclease activity"
evidence=ISS] [GO:0006260 "DNA replication" evidence=ISS]
[GO:0017108 "5'-flap endonuclease activity" evidence=ISS]
[GO:0032508 "DNA duplex unwinding" evidence=ISS] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=ISS] [GO:0043139
"5'-3' DNA helicase activity" evidence=ISS] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0051539 GO:GO:0000729 GO:GO:0017108 GO:GO:0000076
GO:GO:0043139 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 OMA:EHESLCH EMBL:AAMC01051984
EMBL:AAMC01051985 EMBL:AAMC01051986 Ensembl:ENSXETT00000016310
Uniprot:F6QXW0
Length = 1048
Score = 206 (77.6 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 78/231 (33%), Positives = 116/231 (50%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL---TD--SESVINLP---------------DEVYYK 42
L+VQYRM+ I ++ Y+GRL +D S +V+ LP + ++ K
Sbjct: 819 LTVQYRMNSQIMALSNKLVYEGRLECASDRVSNAVVKLPHIKTLLLELEFRESQESMWIK 878
Query: 43 DPVLRPY--VFF---DVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT 97
D VL P V F + I E+ G +S N EAK CL K G
Sbjct: 879 D-VLEPSNPVCFLNTEKIPALETEEKGGIS--NWIEAKLVFCL----TKLFLKAGCRPSD 931
Query: 98 VGIITPYKLQLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VG 156
+GII PY+ QLK + + F NS + +NTVD +QG+++ VII+S VR++ G +G
Sbjct: 932 IGIIAPYRQQLKVISNYF----NSLSASAVEVNTVDKYQGRDKSVIIVSFVRSNIDGKLG 987
Query: 157 -FVADIRRMNVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDM 206
+ D RR+NVALTRA+ L ++G L++ LI K++N D+
Sbjct: 988 DLLKDWRRLNVALTRAKHKLIMLGCVPTLSRFLCLEQLICHLKSKNHIYDL 1038
>UNIPROTKB|F1MHU8 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051260 "protein homooligomerization" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0032797 "SMN complex" evidence=IEA] [GO:0032575 "ATP-dependent
5'-3' RNA helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000049 "tRNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00154 SMART:SM00382 SMART:SM00393
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0051260 GO:GO:0043022
GO:GO:0000049 InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GO:GO:0032797 GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:DAAA02063651 IPI:IPI01017505
RefSeq:XP_003584325.1 RefSeq:XP_003588118.1 UniGene:Bt.103594
Ensembl:ENSBTAT00000044489 GeneID:618606 KEGG:bta:618606
Uniprot:F1MHU8
Length = 981
Score = 205 (77.2 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 73/227 (32%), Positives = 115/227 (50%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVI-----NLPDEVYYKDPVLRPYVFFDVIH 56
+L+VQYRMH I + S Y G+LT SV +LP ++ + P + D
Sbjct: 434 MLTVQYRMHQAIARWASEALYHGQLTAHPSVAGHLLRDLPGVAATEETGV-PLLLVDTAG 492
Query: 57 -GR-ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHE 114
G E S N E + V L H+Q L G+ + +ITPY LQ+ L+
Sbjct: 493 CGLLELEEDDEQSKGNPGEVRL-VGL--HVQ-ALVDAGVRAADIAVITPYNLQVDLLRQS 548
Query: 115 FRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARR 173
+ L +L I +VD FQG+E++ +I+S VR++ G VGF+A+ RR+NVA+TRARR
Sbjct: 549 LAHRL-----PELEIRSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARR 603
Query: 174 ALWVMGNAGALTQSDDWAALI----ADSKARNC--YMDMDSLPKEFS 214
+ V+ ++ ++ L+ + R Y+D D +P+ +S
Sbjct: 604 HVAVVCDSRTVSNHAFLKTLVDYLTEHGEVRTAFEYLD-DIVPENYS 649
>ZFIN|ZDB-GENE-030131-9089 [details] [associations]
symbol:mov10b.1 "Moloney leukemia virus 10,
homolog, b.1" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0035279 "mRNA cleavage involved in gene
silencing by miRNA" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR003593
SMART:SM00382 ZFIN:ZDB-GENE-030131-9089 GO:GO:0005524 GO:GO:0003723
GO:GO:0004386 GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:BX323059 EMBL:BC171375
IPI:IPI00801311 RefSeq:NP_001037807.2 UniGene:Dr.74181
ProteinModelPortal:Q1LXK4 STRING:Q1LXK4 Ensembl:ENSDART00000086946
GeneID:556024 KEGG:dre:556024 CTD:556024 HOGENOM:HOG000239755
InParanoid:Q1LXK4 OMA:NLVGECY OrthoDB:EOG4SXNC4 NextBio:20881283
Bgee:Q1LXK4 Uniprot:Q1LXK4
Length = 1013
Score = 204 (76.9 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 62/200 (31%), Positives = 99/200 (49%)
Query: 7 YRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLR--PYVFFDVIHGRESHRGG 64
YR HP I P+ FY L I+ ++ R P +F V+ G++
Sbjct: 754 YRSHPSILKVPNELFYDNELKACADEISSRQYCTWEHLPKRGFPVIFHGVV-GKDEREST 812
Query: 65 SVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT---VGIITPYKLQLKCLQHEFR--NVL 119
S S+ N E + + L T G+ K++ +GII PY+ Q++ ++ + L
Sbjct: 813 SPSFFNTSEIDKIMDYLKKLLLTQAKKGIAKISPKDIGIIAPYRKQVEKIRQAIKIHREL 872
Query: 120 NSEEG-KDLYINTVDAFQGQERDVIIMSCVRASN-H-------GVGFVADIRRMNVALTR 170
S G ++L + +V+ FQGQER VII+S VR+S H +GF+ + +R NVA+TR
Sbjct: 873 KSLSGIEELKVGSVEEFQGQERKVIIVSTVRSSKEHIILDDKFNIGFLKNEKRFNVAVTR 932
Query: 171 ARRALWVMGNAGALTQSDDW 190
A+ L ++GN L + W
Sbjct: 933 AKALLIMVGNPIILRTDEIW 952
>UNIPROTKB|E1C0Z0 [details] [associations]
symbol:HELZ2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0004540 "ribonuclease
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001900 InterPro:IPR007087 InterPro:IPR015880
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS00028 SMART:SM00355
SMART:SM00955 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
GO:GO:0004386 GO:GO:0004540 OMA:FRAAHIM PANTHER:PTHR10887:SF16
GeneTree:ENSGT00550000074391 EMBL:AADN02019144 IPI:IPI00594758
Ensembl:ENSGALT00000009906 Uniprot:E1C0Z0
Length = 2565
Score = 208 (78.3 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 66/220 (30%), Positives = 105/220 (47%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L QYRMH +I +FPS+ FY+ RL ++ +P +Y+K+ P +F V G+E
Sbjct: 2336 MLDTQYRMHKNICEFPSQEFYEHRLKTCPQLLRIPSVLYHKNNRCCPIIFGHV-EGKEQS 2394
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGL-GKV---TVGIITPYKLQLKCLQHEFRN 117
S N + +K E +T K + L G + ++ I++PY Q+ E
Sbjct: 2395 LVISTEEGN-ENSKANPEEVEQAVRTAKQLTLDGTIRPQSIAILSPYNAQVS----EINK 2449
Query: 118 VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRA-SNHGV-------------GFVADIRR 163
L E + + + T+ QG E +I+S VR+ S H + GFV D +
Sbjct: 2450 RLLKEGIRGVTVCTIMKSQGSEWRYVILSTVRSCSRHEIDKKPTKSWQKKHLGFVTDPNQ 2509
Query: 164 MNVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCY 203
+NVA+TRA+ L ++GN L + W L+ NCY
Sbjct: 2510 VNVAITRAQEGLCIIGNRYLLECNPLWRRLLQHYIDHNCY 2549
>UNIPROTKB|E1BY42 [details] [associations]
symbol:E1BY42 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IEA] [GO:0032797 "SMN complex"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0000049 "tRNA binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51061 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0008270 GO:GO:0051260
GO:GO:0043022 GO:GO:0000049 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 GO:GO:0032797 GeneTree:ENSGT00700000104572
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:AADN02040052 EMBL:AADN02040053
IPI:IPI00595444 Ensembl:ENSGALT00000006901 Uniprot:E1BY42
Length = 976
Score = 203 (76.5 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 88/304 (28%), Positives = 138/304 (45%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVI-----NLPDEVYYKDPVLRPYVFFDVIH 56
+L+VQYRMH I + S Y GRLT SV +LP ++ + P + D
Sbjct: 433 MLTVQYRMHEAIMQWASSEMYGGRLTAHPSVAQHLLKDLPGVTCTEETTI-PLLLIDTAG 491
Query: 57 -GR-ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHE 114
G E S N E + V L H+Q L G+ V ++ PY LQ+ L+
Sbjct: 492 CGLLELEVEDEQSKGNPGEVQL-VGL--HIQ-ALVDAGVKARDVAVVAPYNLQVDMLREH 547
Query: 115 FRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARR 173
+L I +VD FQG+E++ +I+S VR++ G VGF+A+ RR+NVA+TRARR
Sbjct: 548 L-----CHRYPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARR 602
Query: 174 ALWVMGNAGALTQSDDWAALIAD----SKARNCYMDMDSL-PKEFSVA----LAAKAPGY 224
+ ++ ++ + L+ + R + +D L P+ +S + KAP
Sbjct: 603 HVAIICDSRTVGSQAFLGRLLEHFRQHGQVRTAFEYLDDLVPENYSHGGERQQSTKAPA- 661
Query: 225 GPLQGKIPHNARGLRSAGQRH-RSFDMNMESRSGTPSED---DEKVSRNGNYRPFKPPLE 280
P P R ++A + ++ E+R +PS E G+ FK LE
Sbjct: 662 APSPKPQPAPGRKPKAAAKAAAKAAPQKQEARC-SPSASRPGGESPGTKGDTNKFKAVLE 720
Query: 281 NSLD 284
L+
Sbjct: 721 AFLE 724
>RGD|68325 [details] [associations]
symbol:Ighmbp2 "immunoglobulin mu binding protein 2" species:10116
"Rattus norvegicus" [GO:0000049 "tRNA binding" evidence=IEA;ISO;ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0001078 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=IDA] [GO:0003677 "DNA binding"
evidence=IEA;ISO;IDA] [GO:0003723 "RNA binding" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISO;ISS] [GO:0005634
"nucleus" evidence=IEA;ISO;ISS] [GO:0005737 "cytoplasm"
evidence=IEA;ISO;ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO;ISS] [GO:0008134 "transcription factor binding"
evidence=IEA;ISO] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0021522 "spinal cord motor neuron differentiation" evidence=ISO]
[GO:0030424 "axon" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA;ISO] [GO:0032575 "ATP-dependent 5'-3' RNA helicase
activity" evidence=IEA;ISO;ISS] [GO:0032797 "SMN complex"
evidence=IEA;ISO] [GO:0043022 "ribosome binding"
evidence=IEA;ISO;ISS] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA;ISO;ISS] [GO:0043621 "protein self-association"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] [GO:0051260 "protein homooligomerization"
evidence=IEA;ISO] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 RGD:68325 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0030424 GO:GO:0001078 GO:GO:0008270 GO:GO:0051260
GO:GO:0043621 GO:GO:0043022 GO:GO:0030529 GO:GO:0000049
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GO:GO:0032797 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OrthoDB:EOG4GHZNJ
PANTHER:PTHR10887:SF23 EMBL:AF199411 IPI:IPI00190206
RefSeq:NP_113774.1 UniGene:Rn.23984 HSSP:P38935
ProteinModelPortal:Q9EQN5 SMR:Q9EQN5 STRING:Q9EQN5 PRIDE:Q9EQN5
GeneID:29532 KEGG:rno:29532 UCSC:RGD:68325 InParanoid:Q9EQN5
NextBio:609508 ArrayExpress:Q9EQN5 Genevestigator:Q9EQN5
Uniprot:Q9EQN5
Length = 988
Score = 203 (76.5 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 66/184 (35%), Positives = 96/184 (52%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN--LPD--EVYYKDPVLRPYVFFDVIH- 56
+L+VQYRMH I + S Y G+LT SV L D V + P + D
Sbjct: 436 MLAVQYRMHQAITRWASEAMYHGQLTAHPSVAGHLLKDLPGVADTEETSVPLLLIDTAGC 495
Query: 57 GR-ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF 115
G E S S N E + V L H+Q L G+ + +I PY LQ+ L+
Sbjct: 496 GLLELEEEDSQSKGNPGEVRL-VTL--HIQ-ALVDAGVQAGDIAVIAPYNLQVDLLRQSL 551
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRA 174
N + +L I +VD FQG+E++ +I++ VR++ G VGF+A+ RR+NVA+TRARR
Sbjct: 552 SN-----KHPELEIKSVDGFQGREKEAVILTFVRSNRKGEVGFLAEDRRINVAVTRARRH 606
Query: 175 LWVM 178
+ V+
Sbjct: 607 VAVI 610
>UNIPROTKB|Q9EQN5 [details] [associations]
symbol:Ighmbp2 "DNA-binding protein SMUBP-2" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154 SMART:SM00382
SMART:SM00393 RGD:68325 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0003677 GO:GO:0030424 GO:GO:0001078
GO:GO:0008270 GO:GO:0051260 GO:GO:0043621 GO:GO:0043022
GO:GO:0030529 GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0043141 GO:GO:0032797 HOGENOM:HOG000185831
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508
OrthoDB:EOG4GHZNJ PANTHER:PTHR10887:SF23 EMBL:AF199411
IPI:IPI00190206 RefSeq:NP_113774.1 UniGene:Rn.23984 HSSP:P38935
ProteinModelPortal:Q9EQN5 SMR:Q9EQN5 STRING:Q9EQN5 PRIDE:Q9EQN5
GeneID:29532 KEGG:rno:29532 UCSC:RGD:68325 InParanoid:Q9EQN5
NextBio:609508 ArrayExpress:Q9EQN5 Genevestigator:Q9EQN5
Uniprot:Q9EQN5
Length = 988
Score = 203 (76.5 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 66/184 (35%), Positives = 96/184 (52%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN--LPD--EVYYKDPVLRPYVFFDVIH- 56
+L+VQYRMH I + S Y G+LT SV L D V + P + D
Sbjct: 436 MLAVQYRMHQAITRWASEAMYHGQLTAHPSVAGHLLKDLPGVADTEETSVPLLLIDTAGC 495
Query: 57 GR-ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF 115
G E S S N E + V L H+Q L G+ + +I PY LQ+ L+
Sbjct: 496 GLLELEEEDSQSKGNPGEVRL-VTL--HIQ-ALVDAGVQAGDIAVIAPYNLQVDLLRQSL 551
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRA 174
N + +L I +VD FQG+E++ +I++ VR++ G VGF+A+ RR+NVA+TRARR
Sbjct: 552 SN-----KHPELEIKSVDGFQGREKEAVILTFVRSNRKGEVGFLAEDRRINVAVTRARRH 606
Query: 175 LWVM 178
+ V+
Sbjct: 607 VAVI 610
>UNIPROTKB|Q60560 [details] [associations]
symbol:IGHMBP2 "DNA-binding protein SMUBP-2" species:10036
"Mesocricetus auratus" [GO:0000049 "tRNA binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISS] [GO:0032575 "ATP-dependent 5'-3' RNA helicase
activity" evidence=ISS] [GO:0043022 "ribosome binding"
evidence=ISS] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=ISS] [GO:0043621 "protein self-association"
evidence=ISS] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0030424 GO:GO:0008270 GO:GO:0006351
GO:GO:0043621 GO:GO:0043022 GO:GO:0030529 GO:GO:0000049
InterPro:IPR014001 SMART:SM00487 GO:GO:0043141 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 HOVERGEN:HBG077019
PANTHER:PTHR10887:SF23 EMBL:L15625 PIR:T48845
ProteinModelPortal:Q60560 SMR:Q60560 Uniprot:Q60560
Length = 989
Score = 202 (76.2 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 66/184 (35%), Positives = 96/184 (52%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN--LPD--EVYYKDPVLRPYVFFDVIH- 56
+L+VQYRMH I + S Y G+LT SV L D V + P + D
Sbjct: 436 MLTVQYRMHQAITRWASEAMYHGQLTAHPSVAGHLLKDLPGVADTEETSVPLLLIDTAGC 495
Query: 57 GR-ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF 115
G E S S N E + V L H+Q L G+ + +I PY LQ+ L+
Sbjct: 496 GLLELDEEDSQSKGNPGEVRL-VTL--HIQ-ALVDAGVHAGDIAVIAPYNLQVDLLRQSL 551
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRA 174
N + +L I +VD FQG+E++ +I++ VR++ G VGF+A+ RR+NVA+TRARR
Sbjct: 552 SN-----KHPELEIKSVDGFQGREKEAVILTFVRSNRKGEVGFLAEDRRINVAVTRARRH 606
Query: 175 LWVM 178
+ V+
Sbjct: 607 VAVI 610
>RGD|1304735 [details] [associations]
symbol:Mov10l1 "Mov10l1, Moloney leukemia virus 10-like 1,
homolog (mouse)" species:10116 "Rattus norvegicus" [GO:0007281
"germ cell development" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=ISO] [GO:0007517 "muscle organ development" evidence=ISO]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0045786
"negative regulation of cell cycle" evidence=ISO] RGD:1304735
GeneTree:ENSGT00550000074391 InterPro:IPR026125
PANTHER:PTHR10887:SF6 IPI:IPI00560261 Ensembl:ENSRNOT00000050620
ArrayExpress:F1M357 Uniprot:F1M357
Length = 550
Score = 196 (74.1 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 68/216 (31%), Positives = 106/216 (49%)
Query: 7 YRMHPHIRDFPSRHFYQGRL---TDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHRG 63
YR H + PSR FY L D + V +L + K P + F + G E+ G
Sbjct: 337 YRSHSALLALPSRLFYHRELEVCADPKVVTSLLG--WEKLPRKGFPLIFHGVRGNEAREG 394
Query: 64 GSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSEE 123
S S+ + EA V Y L S + +G+ITPY+ Q++ ++ RNV +
Sbjct: 395 RSPSWFSPAEA-VQVMRYCCLLARNVSSQVSSKDIGVITPYRKQVEKIKILLRNV----D 449
Query: 124 GKDLYINTVDAFQGQERDVIIMSCVRASN-------HGVGFVADIRRMNVALTRARRALW 176
D+ + +V+ FQGQE VI++S VR++ + +GF+++ +R NVA+TR + L
Sbjct: 450 LTDIKVGSVEEFQGQEYLVIVISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRPKALLI 509
Query: 177 VMGNAGALTQSDDWAALIADSKARNCYMDMDSLPKE 212
V+GN L + + AL+ S Y D LP E
Sbjct: 510 VLGNPHVLVRDPCFGALLEYSVTNGVYTGCD-LPPE 544
>MGI|MGI:99954 [details] [associations]
symbol:Ighmbp2 "immunoglobulin mu binding protein 2"
species:10090 "Mus musculus" [GO:0000049 "tRNA binding"
evidence=ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0001078 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006412 "translation"
evidence=NAS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0021522
"spinal cord motor neuron differentiation" evidence=IMP]
[GO:0030424 "axon" evidence=IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0032575 "ATP-dependent 5'-3' RNA helicase activity"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043022 "ribosome binding" evidence=ISO;IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0043141 "ATP-dependent 5'-3'
DNA helicase activity" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=ISO] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154
SMART:SM00382 SMART:SM00393 MGI:MGI:99954 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0006412 GO:GO:0030424 GO:GO:0043025
GO:GO:0008270 GO:GO:0051260 GO:GO:0006351 GO:GO:0043621
GO:GO:0043022 GO:GO:0030426 GO:GO:0021522 GO:GO:0030529
GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 HOVERGEN:HBG077019
OrthoDB:EOG4GHZNJ PANTHER:PTHR10887:SF23 EMBL:L10075
IPI:IPI00113033 PIR:S35633 UniGene:Mm.3179
ProteinModelPortal:P40694 SMR:P40694 IntAct:P40694 STRING:P40694
PhosphoSite:P40694 PaxDb:P40694 PRIDE:P40694 UCSC:uc008fwa.1
InParanoid:P40694 CleanEx:MM_IGHMBP2 Genevestigator:P40694
GermOnline:ENSMUSG00000024831 Uniprot:P40694
Length = 993
Score = 198 (74.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 64/184 (34%), Positives = 95/184 (51%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN--LPD--EVYYKDPVLRPYVFFDVIH- 56
+L+VQYRMH I + S Y G+ T SV L D V + P + D
Sbjct: 436 MLTVQYRMHQAIMCWASEAMYHGQFTSHPSVAGHLLKDLPGVTDTEETRVPLLLIDTAGC 495
Query: 57 GR-ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF 115
G E S S N E + V L H+Q L G+ + +I PY LQ+ L+
Sbjct: 496 GLLELEEEDSQSKGNPGEVRL-VTL--HIQ-ALVDAGVQAGDIAVIAPYNLQVDLLRQSL 551
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRA 174
N + +L I +VD FQG+E++ ++++ VR++ G VGF+A+ RR+NVA+TRARR
Sbjct: 552 SN-----KHPELEIKSVDGFQGREKEAVLLTFVRSNRKGEVGFLAEDRRINVAVTRARRH 606
Query: 175 LWVM 178
+ V+
Sbjct: 607 VAVI 610
>UNIPROTKB|Q9BXT6 [details] [associations]
symbol:MOV10L1 "Putative helicase Mov10l1" species:9606
"Homo sapiens" [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=NAS] [GO:0007283 "spermatogenesis" evidence=IEP]
[GO:0005524 "ATP binding" evidence=TAS] [GO:0000287 "magnesium ion
binding" evidence=TAS] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0007281 "germ cell development" evidence=IEP] [GO:0005622
"intracellular" evidence=IC] GO:GO:0007275 GO:GO:0005524
GO:GO:0000287 GO:GO:0007283 GO:GO:0003723 GO:GO:0005622
GO:GO:0007281 eggNOG:COG1112 GO:GO:0004004 EMBL:AL022328
EMBL:AF285604 EMBL:AK000033 EMBL:AK090740 EMBL:CR456466
EMBL:AL034546 EMBL:BC150137 EMBL:BC152539 EMBL:AL133068
IPI:IPI00005638 IPI:IPI00178391 IPI:IPI00215671 IPI:IPI00853536
PIR:T42668 RefSeq:NP_001157576.1 RefSeq:NP_001157577.1
RefSeq:NP_001157578.1 RefSeq:NP_061868.1 UniGene:Hs.62880
ProteinModelPortal:Q9BXT6 SMR:Q9BXT6 STRING:Q9BXT6
PhosphoSite:Q9BXT6 DMDM:22095856 PaxDb:Q9BXT6 PeptideAtlas:Q9BXT6
PRIDE:Q9BXT6 DNASU:54456 Ensembl:ENST00000262794
Ensembl:ENST00000354853 Ensembl:ENST00000395843
Ensembl:ENST00000395852 Ensembl:ENST00000395858
Ensembl:ENST00000545383 GeneID:54456 KEGG:hsa:54456 UCSC:uc003bjj.3
UCSC:uc003bjl.3 UCSC:uc003bjm.1 CTD:54456 GeneCards:GC22P050528
HGNC:HGNC:7201 HPA:HPA019034 MIM:605794 neXtProt:NX_Q9BXT6
PharmGKB:PA30909 HOVERGEN:HBG052382 InParanoid:Q9BXT6 KO:K13983
OMA:NMSGVTL OrthoDB:EOG49GKFV PhylomeDB:Q9BXT6 GenomeRNAi:54456
NextBio:56697 ArrayExpress:Q9BXT6 Bgee:Q9BXT6 CleanEx:HS_MOV10L1
Genevestigator:Q9BXT6 GermOnline:ENSG00000073146 InterPro:IPR026125
PANTHER:PTHR10887:SF6 Uniprot:Q9BXT6
Length = 1211
Score = 198 (74.8 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 70/217 (32%), Positives = 108/217 (49%)
Query: 7 YRMHPHIRDFPSRHFYQGRL---TDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHRG 63
YR H + PSR FY L D V +L + K P + F + G E+ G
Sbjct: 972 YRSHEALLMLPSRLFYHRELEVCADPTVVTSLLG--WEKLPKKGFPLIFHGVRGSEAREG 1029
Query: 64 GSVSYQNVDEAKFGV---CLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
S S+ N EA + CL H ++ S + +G+ITPY+ Q++ ++ RNV
Sbjct: 1030 KSPSWFNPAEAVQVLRYCCLLAH---SISSQ-VSASDIGVITPYRKQVEKIRILLRNV-- 1083
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRASN-------HGVGFVADIRRMNVALTRARR 173
+ D+ + +V+ FQGQE VII+S VR++ + +GF+++ +R NVA+TR +
Sbjct: 1084 --DLMDIKVGSVEEFQGQEYLVIIISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRPKA 1141
Query: 174 ALWVMGNAGALTQSDDWAALIADSKARNCYMDMDSLP 210
L V+GN L + + AL+ S YM D LP
Sbjct: 1142 LLIVLGNPHVLVRDPCFGALLEYSITNGVYMGCD-LP 1177
>MGI|MGI:1891384 [details] [associations]
symbol:Mov10l1 "Moloney leukemia virus 10-like 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IDA]
[GO:0008283 "cell proliferation" evidence=IDA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0045786 "negative regulation
of cell cycle" evidence=IDA] MGI:MGI:1891384 GO:GO:0005524
GO:GO:0005737 GO:GO:0008283 GO:GO:0007283 GO:GO:0007517
GO:GO:0004386 eggNOG:COG1112 GO:GO:0045786 CTD:54456
HOVERGEN:HBG052382 KO:K13983 InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:AF285587 EMBL:AF340211 EMBL:AY303754
EMBL:AK084786 IPI:IPI00118099 IPI:IPI00227971 IPI:IPI00453884
RefSeq:NP_112550.2 UniGene:Mm.358791 ProteinModelPortal:Q99MV5
SMR:Q99MV5 STRING:Q99MV5 PhosphoSite:Q99MV5 PaxDb:Q99MV5
PRIDE:Q99MV5 DNASU:83456 GeneID:83456 KEGG:mmu:83456
HOGENOM:HOG000015363 InParanoid:Q99MV5 NextBio:350584
CleanEx:MM_MOV10L1 Genevestigator:Q99MV5
GermOnline:ENSMUSG00000015365 Uniprot:Q99MV5
Length = 1187
Score = 197 (74.4 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 67/216 (31%), Positives = 107/216 (49%)
Query: 7 YRMHPHIRDFPSRHFYQGRL---TDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHRG 63
YR H + PSR FY L D + V +L + K P + F + G E+ G
Sbjct: 974 YRSHSALLALPSRLFYHRELEVCADPKVVTSLLG--WEKLPRKGFPLIFHGVRGNEAREG 1031
Query: 64 GSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSEE 123
S S+ + EA V Y L S + +G+ITPY+ Q++ ++ RNV +
Sbjct: 1032 RSPSWFSPAEA-VQVMRYCCLLARSVSSQVSSKDIGVITPYRKQVEKIKILLRNV----D 1086
Query: 124 GKDLYINTVDAFQGQERDVIIMSCVRASN-------HGVGFVADIRRMNVALTRARRALW 176
D+ + +V+ FQGQE VI++S VR++ + +GF+++ +R NVA+TR + L
Sbjct: 1087 LTDIKVGSVEEFQGQEYLVIVISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRPKALLI 1146
Query: 177 VMGNAGALTQSDDWAALIADSKARNCYMDMDSLPKE 212
++GN L + + AL+ S + Y D LP E
Sbjct: 1147 ILGNPHVLVRDPCFGALLEYSVSNGVYTGCD-LPPE 1181
>UNIPROTKB|G3X7G5 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007281
"germ cell development" evidence=IEA] GO:GO:0007283 GO:GO:0007281
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:DAAA02015125 EMBL:DAAA02015122
EMBL:DAAA02015123 EMBL:DAAA02015124 Ensembl:ENSBTAT00000027109
Uniprot:G3X7G5
Length = 1214
Score = 195 (73.7 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 68/216 (31%), Positives = 105/216 (48%)
Query: 7 YRMHPHIRDFPSRHFYQGRL---TDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHRG 63
YR H + PSR FY L D V +L + K P + F + G E+ G
Sbjct: 975 YRSHSALLALPSRLFYHRELEVCADPTVVASLLG--WEKLPRKGFPLIFHGVRGNEAREG 1032
Query: 64 GSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSEE 123
S S+ N EA V Y + S + +G+ITPY+ Q++ ++ RNV +
Sbjct: 1033 RSPSWFNPAEA-VQVMRYCCMLARSVSSQVSARDIGVITPYRKQVEKIKILLRNV----D 1087
Query: 124 GKDLYINTVDAFQGQERDVIIMSCVRASN-------HGVGFVADIRRMNVALTRARRALW 176
D+ + +V+ FQGQE V+I+S VR++ + +GF+++ +R NVA+TR + L
Sbjct: 1088 LMDIKVGSVEEFQGQEYLVVIISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRPKALLI 1147
Query: 177 VMGNAGALTQSDDWAALIADSKARNCYMDMDSLPKE 212
V+GN L + + AL+ S Y D LP E
Sbjct: 1148 VLGNPHVLVRDPCFGALLEYSITNGVYTGCD-LPPE 1182
>FB|FBgn0034187 [details] [associations]
symbol:CG6967 species:7227 "Drosophila melanogaster"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=ISS] UCSC:CG6967-RC
FlyBase:FBgn0034187 NextBio:801049 EMBL:AY119610
ProteinModelPortal:Q8MRI1 PRIDE:Q8MRI1 InParanoid:Q8MRI1
PhylomeDB:Q8MRI1 ArrayExpress:Q8MRI1 Bgee:Q8MRI1 Uniprot:Q8MRI1
Length = 825
Score = 193 (73.0 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 56/206 (27%), Positives = 101/206 (49%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPY--VFFDVIHGR 58
M L YR HP I + +Y G L +++ + + P + F HG
Sbjct: 553 MRLCRNYRSHPQIVRLFNELYYNGELKAQAPAMDVNLAANWS-VLTNPQFPIIFQATHGV 611
Query: 59 ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNV 118
+ S S N EA+ +C Y +++ + +G+ VGI+ PY Q K + +
Sbjct: 612 TNREQNSTSSYNNLEAEV-ICWY--VKRLINDRVVGQEDVGIVAPYTAQGKLVT----KL 664
Query: 119 LNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVM 178
L S+ ++ + +V+ +QG+E+ +II S V++ + +GF+ + RR+NV L+RA+ L ++
Sbjct: 665 LQSKGYPNVEVGSVETYQGREKTIIIASLVKSFTN-MGFMCNPRRVNVLLSRAKALLILV 723
Query: 179 GNAGALTQSDDWAALIADSKARNCYM 204
GN L D+ +I + K Y+
Sbjct: 724 GNPVTLRHHSDFKFVINECKKHGTYL 749
Score = 41 (19.5 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 239 RSAGQR-H---RSFDMNMESRSGTPSEDDEKV 266
R +GQR H ++ + N ES S P ++D+K+
Sbjct: 753 RDSGQRPHILIKADESNEES-SSEPEDEDDKL 783
>UNIPROTKB|F1RXR7 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007281
"germ cell development" evidence=IEA] GO:GO:0007283 GO:GO:0007281
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:BX321913 Ensembl:ENSSSCT00000001066
Uniprot:F1RXR7
Length = 1211
Score = 192 (72.6 bits), Expect = 9.4e-12, P = 9.4e-12
Identities = 76/230 (33%), Positives = 112/230 (48%)
Query: 7 YRMHPHIRDFPSRHFYQGRL---TDSESVINLPDEVYYKDPVLR-PYVFFDVIHGRESHR 62
YR H + PSR FY L D + V +L + K P P VF V G E+
Sbjct: 970 YRSHSALLALPSRLFYHRELEVCADPKVVTSLLG--WEKLPRKGFPLVFHGV-RGTEARE 1026
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSE 122
G S S+ N EA V Y L S + +G+ITPY+ Q++ ++ RNV +E
Sbjct: 1027 GRSPSWFNPTEA-VQVMRYCCLLARSVSSQVSAGDIGVITPYRKQVEKIKILLRNVGLAE 1085
Query: 123 EGKDLYINTVDAFQGQERDVIIMSCVRASN-------HGVGFVADIRRMNVALTRARRAL 175
+ + +V+ FQGQE VII+S VR++ + +GF+++ +R NVA+TR + L
Sbjct: 1086 ----VKVGSVEEFQGQEYLVIIISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRPKALL 1141
Query: 176 WVMGNAGALTQSDD-WAALIADSKARNCYMDMDSLPKEFSVALAAKAPGY 224
V+GN L + D + AL+ S Y + LP E AL G+
Sbjct: 1142 IVLGNPHVLVRQDPCFGALLEYSITSGVYTGCN-LPPELQ-ALQNHGQGH 1189
>UNIPROTKB|P38935 [details] [associations]
symbol:IGHMBP2 "DNA-binding protein SMUBP-2" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0006412
"translation" evidence=NAS] [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000049 "tRNA binding" evidence=IDA] [GO:0032797
"SMN complex" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003723
"RNA binding" evidence=IDA] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IDA] [GO:0043141 "ATP-dependent 5'-3'
DNA helicase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0030424 "axon" evidence=ISS] [GO:0030426 "growth
cone" evidence=ISS] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=TAS] [GO:0003697
"single-stranded DNA binding" evidence=TAS] [GO:0006260 "DNA
replication" evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS]
[GO:0006310 "DNA recombination" evidence=TAS] [GO:0051260 "protein
homooligomerization" evidence=IPI] [GO:0032508 "DNA duplex
unwinding" evidence=TAS] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0006412
GO:GO:0006260 GO:GO:0008219 GO:GO:0030424 GO:GO:0008270
GO:GO:0006281 GO:GO:0051260 GO:GO:0006351 GO:GO:0043022
GO:GO:0000122 GO:GO:0030426 GO:GO:0006310 GO:GO:0003697
GO:GO:0030529 GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0043141 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Orphanet:98920 EMBL:AP000808 Gene3D:4.10.1110.10 GO:GO:0032575
EMBL:L14754 EMBL:L24544 EMBL:BC025299 EMBL:M64979 IPI:IPI00009379
PIR:A47500 RefSeq:NP_002171.2 UniGene:Hs.503048 PDB:1MSZ PDB:2LRR
PDB:4B3F PDB:4B3G PDBsum:1MSZ PDBsum:2LRR PDBsum:4B3F PDBsum:4B3G
ProteinModelPortal:P38935 SMR:P38935 IntAct:P38935 STRING:P38935
PhosphoSite:P38935 DMDM:229462778 PaxDb:P38935 PRIDE:P38935
Ensembl:ENST00000255078 GeneID:3508 KEGG:hsa:3508 UCSC:uc001ook.1
CTD:3508 GeneCards:GC11P068671 H-InvDB:HIX0009884
H-InvDB:HIX0171377 HGNC:HGNC:5542 MIM:600502 MIM:604320
neXtProt:NX_P38935 PharmGKB:PA29731 HOVERGEN:HBG077019
InParanoid:P38935 OMA:HARQRIS OrthoDB:EOG4GHZNJ PhylomeDB:P38935
EvolutionaryTrace:P38935 GenomeRNAi:3508 NextBio:13764
ArrayExpress:P38935 Bgee:P38935 CleanEx:HS_IGHMBP2
Genevestigator:P38935 GermOnline:ENSG00000132740
PANTHER:PTHR10887:SF23 Uniprot:P38935
Length = 993
Score = 190 (71.9 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 85/311 (27%), Positives = 140/311 (45%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVI-----NLPDEVYYKDPVLRPYVFFDVIH- 56
L+VQYRMH I + S Y G+LT SV +LP ++ + P + D
Sbjct: 438 LTVQYRMHQAIMRWASDTMYLGQLTAHSSVARHLLRDLPGVAATEETGV-PLLLVDTAGC 496
Query: 57 GR-ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEF 115
G E S N E + V L H+Q L G+ + +++PY LQ+ L+
Sbjct: 497 GLFELEEEDEQSKGNPGEVRL-VSL--HIQ-ALVDAGVPARDIAVVSPYNLQVDLLR--- 549
Query: 116 RNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRA 174
+++++ +L I +VD FQG+E++ +I+S VR++ G VGF+A+ RR+NVA+TRARR
Sbjct: 550 QSLVHRHP--ELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARRH 607
Query: 175 LWVMGNAGALTQSDDWAALIA----DSKARNC--YMDMDSLPKEFSVALAAKAPGYGPLQ 228
+ V+ ++ + L+ + R Y+D D +P+ +S + G
Sbjct: 608 VAVICDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYLD-DIVPENYS---HENSQGSSHAA 663
Query: 229 GKIPHNARGLRSAGQRHRSFDMNMESRSGTPSEDDEKVSRNGNYRPFKPPLENSLDDFDQ 288
K A R+ QR + P+ K G + P + SL+
Sbjct: 664 TKPQGPATSTRTGSQRQEG-----GQEAAAPARQGRKKPA-GKSLASEAPSQPSLNGGSP 717
Query: 289 SGEKYRDAWQH 299
G + +D H
Sbjct: 718 EGVESQDGVDH 728
>UNIPROTKB|J9NRI6 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014001 PROSITE:PS51192 GO:GO:0017108 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852
EMBL:AAEX03002775 EMBL:AAEX03002776 EMBL:AAEX03002777
Ensembl:ENSCAFT00000046272 Uniprot:J9NRI6
Length = 640
Score = 187 (70.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 71/233 (30%), Positives = 115/233 (49%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL---TD--SESVINLPD--EV-----YYKD----PVL 46
L+VQYRM+ I ++ Y G+L +D + +V+NLP+ +V +Y D P +
Sbjct: 402 LTVQYRMNSKIMSLSNKLTYDGKLECGSDKVANAVVNLPNLKDVKLELEFYADYSENPWM 461
Query: 47 -------RPYVFF--DVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT 97
P F D + E G VS N+ EAK V L K G
Sbjct: 462 IGAFEPNNPVCFLNTDKVPAPEQVEKGGVS--NITEAKLIVFLTSVFIKA----GCKPSD 515
Query: 98 VGIITPYKLQLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VG 156
+GII PY+ QLK + ++L + + +NTVD +QG+++ +I++S VR++ G +G
Sbjct: 516 IGIIAPYRQQLKIIN----DLLFHSSIRMVEVNTVDKYQGRDKSIILVSFVRSNKDGPIG 571
Query: 157 -FVADIRRMNVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMDS 208
+ D RR+NVA+TRA+ L ++G +L + L+ + MD+ S
Sbjct: 572 ELLKDWRRLNVAITRAKHKLILLGCVPSLNRYPPLGKLLHHLNSEKLIMDLPS 624
>UNIPROTKB|Q9P2E3 [details] [associations]
symbol:ZNFX1 "NFX1-type zinc finger-containing protein 1"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] Pathway_Interaction_DB:telomerasepathway
GO:GO:0046872 eggNOG:COG1112 EMBL:AL049766 EMBL:AB037825
EMBL:AK000573 EMBL:AK002139 EMBL:AK022641 EMBL:AK023836
IPI:IPI00165981 IPI:IPI00220462 RefSeq:NP_066363.1
UniGene:Hs.371794 ProteinModelPortal:Q9P2E3 SMR:Q9P2E3
IntAct:Q9P2E3 STRING:Q9P2E3 PhosphoSite:Q9P2E3 DMDM:23821814
PaxDb:Q9P2E3 PeptideAtlas:Q9P2E3 PRIDE:Q9P2E3
Ensembl:ENST00000371752 Ensembl:ENST00000396105 GeneID:57169
KEGG:hsa:57169 UCSC:uc002xui.3 CTD:57169 GeneCards:GC20M047854
HGNC:HGNC:29271 HPA:HPA046629 neXtProt:NX_Q9P2E3
PharmGKB:PA143485687 HOVERGEN:HBG052201 InParanoid:Q9P2E3
OMA:CVRLCSE PhylomeDB:Q9P2E3 ChiTaRS:ZNFX1 GenomeRNAi:57169
NextBio:63185 ArrayExpress:Q9P2E3 Bgee:Q9P2E3 CleanEx:HS_ZNFX1
Genevestigator:Q9P2E3 GermOnline:ENSG00000124201 Uniprot:Q9P2E3
Length = 1918
Score = 192 (72.6 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 66/203 (32%), Positives = 104/203 (51%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHG-RESH 61
L+ Q+RM P I + H YQ L + SV+ Y K + +FF V H E
Sbjct: 1069 LNYQHRMCPEIARLLTPHIYQD-LENHPSVLK-----YEKIKGVSSNLFF-VEHNFPEQE 1121
Query: 62 RGGSVSYQNVDEAKFGV--CLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVL 119
S+QN EA F V C Y Q+ L S ++T I+T Y QL CL R ++
Sbjct: 1122 IQEGKSHQNQHEAHFVVELCKYFLCQEYLPS----QIT--ILTTYTGQLFCL----RKLM 1171
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVM 178
++ + ++ VD +QG+E D+I++S VR++ G VGF+ R+ VAL+RA++ ++ +
Sbjct: 1172 PAKTFAGVRVHVVDKYQGEENDIILLSLVRSNQEGKVGFLQISNRICVALSRAKKGMYCI 1231
Query: 179 GNAGALTQSDDWAALIADSKARN 201
GN L + W+ +I + N
Sbjct: 1232 GNMQMLAKVPLWSKIIHTLRENN 1254
>FB|FBgn0033889 [details] [associations]
symbol:CG6701 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR007087 InterPro:IPR015880
PROSITE:PS00028 SMART:SM00355 GO:GO:0008270 GO:GO:0005622
FlyBase:FBgn0033889 ChiTaRS:CG6701 EMBL:AY128442
ProteinModelPortal:Q8MQQ9 STRING:Q8MQQ9 PRIDE:Q8MQQ9
InParanoid:Q8MQQ9 ArrayExpress:Q8MQQ9 Bgee:Q8MQQ9 Uniprot:Q8MQQ9
Length = 1261
Score = 190 (71.9 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 71/244 (29%), Positives = 113/244 (46%)
Query: 7 YRMHPHIRDFPSRHFYQGRL-TDS--ESVINLPDEVYYKDPVLRPYVFFDVIHGRESHRG 63
+R HP I + +Y+G L T++ E V + Y + P +F V G +
Sbjct: 774 FRSHPEIVSLYNNMYYEGHLRTEAPMEIVCRFHNWFYLPNATF-PIMFHSVF-GTTMNTK 831
Query: 64 GSVSYQNVDEAKFGVCLYEHLQKT-LKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSE 122
SVS N E + + L L L + +GII+PYK Q + +Q + LN
Sbjct: 832 SSVSLCNNKEIDVVMDYVKDLMYFGLNGEKLLQTDIGIISPYKNQYQRIQEQ----LNMR 887
Query: 123 EGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNAG 182
+ +V+ FQG+E+ VII+S VR+ +GF+ + RR+NV L+R L ++GN
Sbjct: 888 NWSQIDCGSVELFQGKEKHVIIVSFVRSFTPKLGFLNNERRLNVLLSRPISLLILIGNPR 947
Query: 183 ALTQSDDWAALIADSKARNCYMDMDSLPKEF--SVALAAKAPGYGPLQGKIPHNARGLRS 240
L+Q+ D+ +I + R + L ++F + A G G P A GLR
Sbjct: 948 TLSQNSDFQHIIEMCRNRKTLVGEQYLNEDFITNKKTGANNVNKGGAAGDQP--ASGLRQ 1005
Query: 241 AGQR 244
+R
Sbjct: 1006 PLKR 1009
>WB|WBGene00014208 [details] [associations]
symbol:ZK1067.2 species:6239 "Caenorhabditis elegans"
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] GeneTree:ENSGT00700000104467
EMBL:Z70038 RefSeq:NP_001254204.1 EnsemblMetazoa:ZK1067.2b
GeneID:174463 KEGG:cel:CELE_ZK1067.2 CTD:174463 WormBase:ZK1067.2b
OMA:THIGVQI Uniprot:E9P860
Length = 2443
Score = 192 (72.6 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 61/206 (29%), Positives = 101/206 (49%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
L Q+RM+ I D + + +TD+E+V PD + +FF H
Sbjct: 1530 LRQQHRMNLTISDKIVKLSFYDNVTDAENVGLYPDV-----QGMATNLFF-WSHTSMEES 1583
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSE 122
VS+ N E V L +HL K ++ + V + Y Q + E+ NV S
Sbjct: 1584 PDEVSWLNKHEISMTVALVKHLLK--QNYTTNDIVV--LATYSAQKNLMYREYANVFGST 1639
Query: 123 EGKDLY-INTVDAFQGQERDVIIMSCVRA-----SNHGVGFVADIRRMNVALTRARRALW 176
++ + TVD+FQG+ER ++I+S VR+ N G+GF+A R+ VALTRA+ ++
Sbjct: 1640 PDSNVIPVETVDSFQGKERKIVIVSLVRSHRGGRENTGIGFLAVANRICVALTRAQHGMY 1699
Query: 177 VMGN-AGALTQSDDWAALIADSKARN 201
++GN A + S+ W ++ + + N
Sbjct: 1700 IIGNGAYIMNNSELWNKIVNNLRRSN 1725
>TAIR|locus:2162858 [details] [associations]
symbol:AT5G35970 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] EMBL:CP002688 GO:GO:0009570 GO:GO:0003677
GO:GO:0009941 InterPro:IPR014001 SMART:SM00487 IPI:IPI00520082
RefSeq:NP_198446.3 UniGene:At.45828 ProteinModelPortal:F4K1G7
SMR:F4K1G7 PRIDE:F4K1G7 EnsemblPlants:AT5G35970.1 GeneID:833589
KEGG:ath:AT5G35970 OMA:DHFQREL Uniprot:F4K1G7
Length = 961
Score = 185 (70.2 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 64/206 (31%), Positives = 107/206 (51%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN--LPDEVYYKDPVLR--PYVFFD--VIH 56
L+ QYRM+ I + S+ Y G L + SV + L D + K + P V D + +
Sbjct: 731 LTTQYRMNDVIAGWASKEMYGGWLKSAPSVASHLLIDSPFVKATWITQCPLVLLDTRMPY 790
Query: 57 GRES----HR---GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLK 109
G S R G+ S N EA V H+ + + G+ + + + +PY Q++
Sbjct: 791 GSLSVGCEERLDPAGTGSLYNEGEADIVV---NHVISLIYA-GVSPMAIAVQSPYVAQVQ 846
Query: 110 CLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVAL 168
L+ + +G + + T+D+FQG+E D +I+S VR++N G VGF+ D RRMNVA+
Sbjct: 847 LLRERLDD-FPVADGVE--VATIDSFQGREADAVIISMVRSNNLGAVGFLGDSRRMNVAI 903
Query: 169 TRARRALWVMGNAGALTQSDDWAALI 194
TRAR+ + V+ ++ + + A L+
Sbjct: 904 TRARKHVAVVCDSSTICHNTFLARLL 929
>MGI|MGI:2138982 [details] [associations]
symbol:Znfx1 "zinc finger, NFX1-type containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] MGI:MGI:2138982 GO:GO:0046872
EMBL:CH466551 eggNOG:COG1112 GeneTree:ENSGT00700000104467
EMBL:AL591711 CTD:57169 HOVERGEN:HBG052201 OMA:CVRLCSE
EMBL:AK149249 EMBL:AK150223 EMBL:AK157301 EMBL:BC025488
IPI:IPI00660406 RefSeq:NP_001028368.2 UniGene:Mm.297074
ProteinModelPortal:Q8R151 STRING:Q8R151 PhosphoSite:Q8R151
PaxDb:Q8R151 PRIDE:Q8R151 Ensembl:ENSMUST00000048988 GeneID:98999
KEGG:mmu:98999 HOGENOM:HOG000231023 InParanoid:A2A5R3
NextBio:353739 Bgee:Q8R151 CleanEx:MM_ZNFX1 Genevestigator:Q8R151
GermOnline:ENSMUSG00000039501 Uniprot:Q8R151
Length = 1909
Score = 188 (71.2 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 65/203 (32%), Positives = 103/203 (50%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHG-RESH 61
L+ Q+RM P I + H YQ L + SV+ Y + + +FF V H E
Sbjct: 1062 LNYQHRMRPEIARLLTPHIYQD-LENHPSVLK-----YEQIKGVSSNLFF-VEHNFPEQE 1114
Query: 62 RGGSVSYQNVDEAKFGV--CLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVL 119
S+QN EA F V C Y Q+ L S ++T I+T Y QL CL R ++
Sbjct: 1115 IQEGKSHQNQHEAHFVVELCQYLLCQEYLPS----QIT--ILTTYTGQLFCL----RKLM 1164
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVM 178
+ + ++ VD +QG+E D+I++S VR++ G VGF+ R+ VAL+RA++ ++ +
Sbjct: 1165 PVKTFAGIKVHVVDKYQGEENDIILLSLVRSNQEGKVGFLQIPNRICVALSRAKKGMYCI 1224
Query: 179 GNAGALTQSDDWAALIADSKARN 201
GN L + W+ +I + N
Sbjct: 1225 GNMQMLAKVPLWSRIIHTLRENN 1247
>UNIPROTKB|F6UZP1 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 OMA:EHESLCH Ensembl:ENSCAFT00000021752
EMBL:AAEX03002775 EMBL:AAEX03002776 EMBL:AAEX03002777
Uniprot:F6UZP1
Length = 1021
Score = 185 (70.2 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 71/233 (30%), Positives = 115/233 (49%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL---TD--SESVINLPD--EV-----YYKD----PVL 46
L+VQYRM+ I ++ Y G+L +D + +V+NLP+ +V +Y D P +
Sbjct: 791 LTVQYRMNSKIMSLSNKLTYDGKLECGSDKVANAVVNLPNLKDVKLELEFYADYSENPWM 850
Query: 47 -------RPYVFF--DVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT 97
P F D + E G VS N+ EAK V L K G
Sbjct: 851 IGAFEPNNPVCFLNTDKVPAPEQVEKGGVS--NITEAKLIVFLTSVFIKA----GCKPSD 904
Query: 98 VGIITPYKLQLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VG 156
+GII PY+ QLK + ++L + + +NTVD +QG+++ +I++S VR++ G +G
Sbjct: 905 IGIIAPYRQQLKIIN----DLLFHSSIRMVEVNTVDKYQGRDKSIILVSFVRSNKDGPIG 960
Query: 157 -FVADIRRMNVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMDS 208
+ D RR+NVA+TRA+ L ++G +L + L+ + MD+ S
Sbjct: 961 ELLKDWRRLNVAITRAKHKLILLGCVPSLNRYPPLGKLLHHLNSEKKIMDLPS 1013
>UNIPROTKB|H0Y455 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 GO:GO:0017108 GO:GO:0043142 GO:GO:0033567
PANTHER:PTHR10887:SF14 EMBL:AL136233 HGNC:HGNC:2939
ProteinModelPortal:H0Y455 PRIDE:H0Y455 Ensembl:ENST00000440722
Bgee:H0Y455 Uniprot:H0Y455
Length = 375
Score = 178 (67.7 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 70/204 (34%), Positives = 101/204 (49%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL---TD--SESVINL---PD-----EVY--YKD-PVL 46
L+VQYRM+ I ++ Y+G+L +D + +VINL D E Y Y D P L
Sbjct: 145 LTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLRHFKDVKLELEFYADYSDNPWL 204
Query: 47 -------RPYVFF--DVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT 97
P F D + E G VS NV EAK V L K G
Sbjct: 205 MGVFEPNNPVCFLNTDKVPAPEQVEKGGVS--NVTEAKLIVFLTSIFVKA----GCSPSD 258
Query: 98 VGIITPYKLQLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VG 156
+GII PY+ QLK + + E +NTVD +QG+++ ++++S VR++ G VG
Sbjct: 259 IGIIAPYRQQLKIINDLLARSIGMVE-----VNTVDKYQGRDKSIVLVSFVRSNKDGTVG 313
Query: 157 -FVADIRRMNVALTRARRALWVMG 179
+ D RR+NVA+TRA+ L ++G
Sbjct: 314 ELLKDWRRLNVAITRAKHKLILLG 337
>RGD|1306791 [details] [associations]
symbol:Dna2 "DNA replication helicase 2 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0000076 "DNA replication
checkpoint" evidence=ISO;ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISO;ISS] [GO:0003677 "DNA binding"
evidence=ISO;ISS] [GO:0003678 "DNA helicase activity"
evidence=ISO;ISS] [GO:0004518 "nuclease activity" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA;ISO] [GO:0006260 "DNA replication" evidence=ISO;ISS]
[GO:0006264 "mitochondrial DNA replication" evidence=IEA;ISO]
[GO:0006284 "base-excision repair" evidence=IEA;ISO] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=IEA;ISO] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISO;ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
[GO:0033567 "DNA replication, Okazaki fragment processing"
evidence=ISO;ISS] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA;ISO] [GO:0043137 "DNA replication, removal of RNA
primer" evidence=IEA;ISO] [GO:0043139 "5'-3' DNA helicase activity"
evidence=ISO;ISS] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISO;ISS] [GO:0043504 "mitochondrial DNA repair"
evidence=IEA;ISO] [GO:0045740 "positive regulation of DNA
replication" evidence=IEA;ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
RGD:1306791 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0006284
GO:GO:0003677 GO:GO:0051539 GO:GO:0042645 GO:GO:0016890
GO:GO:0045740 GO:GO:0000729 GO:GO:0017108 GO:GO:0000076
GO:GO:0043137 GO:GO:0005760 GO:GO:0043139 GO:GO:0043142
GO:GO:0033567 GO:GO:0043504 GO:GO:0006264 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 IPI:IPI00368049
ProteinModelPortal:D3ZG52 Ensembl:ENSRNOT00000000438
UCSC:RGD:1306791 OrthoDB:EOG4CZBF7 Uniprot:D3ZG52
Length = 1059
Score = 185 (70.2 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 68/207 (32%), Positives = 106/207 (51%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL---TD--SESVINLPD------EVY--YKD-PVL-- 46
L++QYRM+ I ++ Y+G+L +D + +VI LP+ E Y Y D P L
Sbjct: 823 LTIQYRMNRKIMSLSNKLTYEGKLECGSDRVANAVITLPNLKDVRLEFYADYSDNPWLAG 882
Query: 47 -----RPYVFF--DVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVG 99
P F D + E G VS NV EA+ L L T G +G
Sbjct: 883 VFEPDNPVCFLNTDKVPAPEQIENGGVS--NVTEAR----LIVFLTSTFIKAGCSPSDIG 936
Query: 100 IITPYKLQLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VG-F 157
II PY+ QL+ + + S G + +NTVD +QG+++ +I++S VR++ G +G
Sbjct: 937 IIAPYRQQLRTITDL---LARSSVGM-VEVNTVDKYQGRDKSLILVSFVRSNEDGTLGEL 992
Query: 158 VADIRRMNVALTRARRALWVMGNAGAL 184
+ D RR+NVA+TRA+ L ++G+ +L
Sbjct: 993 LKDWRRLNVAITRAKHKLILLGSVSSL 1019
>UNIPROTKB|E1BMP7 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9913 "Bos taurus" [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISS]
[GO:0043139 "5'-3' DNA helicase activity" evidence=ISS] [GO:0017108
"5'-flap endonuclease activity" evidence=ISS] [GO:0004518 "nuclease
activity" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0033567
"DNA replication, Okazaki fragment processing" evidence=ISS]
[GO:0006260 "DNA replication" evidence=ISS] [GO:0000729 "DNA
double-strand break processing" evidence=ISS] [GO:0000076 "DNA
replication checkpoint" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0045740 "positive regulation of DNA replication"
evidence=IEA] [GO:0043504 "mitochondrial DNA repair" evidence=IEA]
[GO:0043137 "DNA replication, removal of RNA primer" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IEA] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0042645 GO:GO:0016890 GO:GO:0045740 GO:GO:0000729
GO:GO:0017108 GO:GO:0000076 GO:GO:0043137 EMBL:DAAA02061817
IPI:IPI00688022 NextBio:20878938 GO:GO:0005760 GO:GO:0043139
GO:GO:0043142 GO:GO:0033567 GO:GO:0043504 GO:GO:0006264
PANTHER:PTHR10887:SF14 Uniprot:E1BMP7
Length = 1061
Score = 181 (68.8 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 71/233 (30%), Positives = 116/233 (49%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL---TD--SESVINLPD--EV-----YYKD----PVL 46
L+VQYRM+ I ++ Y+G+L +D + +VINLP+ +V +Y D P L
Sbjct: 823 LTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLPNFKDVKLELEFYADYSENPWL 882
Query: 47 -------RPYVFFDV--IHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT 97
P F + + E G VS N+ EAK V L K G
Sbjct: 883 IAAFEPNNPVCFLNTHKVPAPEQVEKGGVS--NIMEAKLVVFLTSVFIKA----GCKPSD 936
Query: 98 VGIITPYKLQLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VG 156
+GII PY+ QLK + + S G + +NTVD +QG+++ ++++S VR++ G +G
Sbjct: 937 IGIIAPYRQQLKVISDL---LAQSSVGM-VEVNTVDRYQGRDKSIVVVSFVRSNEDGTLG 992
Query: 157 -FVADIRRMNVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMDS 208
+ D RR+NVA+TRA+ L ++G +L++ L+ + +D+ S
Sbjct: 993 ELLKDWRRLNVAITRAKHKLILLGCVPSLSRYPPLRKLLNHLNSEKLIIDLPS 1045
>ZFIN|ZDB-GENE-061013-333 [details] [associations]
symbol:zgc:154086 "zgc:154086" species:7955 "Danio
rerio" [GO:0005575 "cellular_component" evidence=ND]
ZFIN:ZDB-GENE-061013-333 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR025223 Pfam:PF14444
HOVERGEN:HBG052382 KO:K13983 InterPro:IPR026125
PANTHER:PTHR10887:SF6 HOGENOM:HOG000015363 EMBL:BC124807
IPI:IPI00611882 RefSeq:NP_001070795.1 UniGene:Dr.40096
ProteinModelPortal:Q08BA5 GeneID:768184 KEGG:dre:768184
NextBio:20918499 Uniprot:Q08BA5
Length = 1106
Score = 181 (68.8 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 62/215 (28%), Positives = 105/215 (48%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPY-VFFDVIHGRESH 61
L YR H + D PSR FY G L + ++ R + + F + G E
Sbjct: 890 LLYNYRSHEALLDLPSRLFYAGELCVRAQRAAVDSLCHWNKLPTRGFPLIFHGVRGSEMR 949
Query: 62 RGGSVSYQNVDEAKFGVCLYE-HLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
G + S+ N EA V +Y L K L + + +G+I PY+ Q++ + R +L
Sbjct: 950 EGCNPSWFNPAEA-VQVMMYCCQLAKRLYNP-ISAADIGVIAPYRKQVE----KIRVLLQ 1003
Query: 121 SEEGKDLYINTVDAFQGQERDVIIMSCVRAS----NHGV----GFVADIRRMNVALTRAR 172
++ + +V+ FQGQE ++I+S VR++ N + GF+++ +R NVA+TRA+
Sbjct: 1004 RVGLGEVKVGSVEEFQGQEFLIMILSTVRSNESLLNEELQCMLGFLSNPKRFNVAITRAK 1063
Query: 173 RALWVMGNAGALTQSDDWAALIADSKARNCYMDMD 207
L V+GN L + ++AL+ S ++ D
Sbjct: 1064 ALLIVIGNPHVLIKEPCFSALLQYSYDNRAFIGCD 1098
>UNIPROTKB|K7DXW3 [details] [associations]
symbol:DNA2 "DNA replication nuclease DNA2" species:9913
"Bos taurus" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 EMBL:DAAA02061817
PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852
Ensembl:ENSBTAT00000003395 Uniprot:K7DXW3
Length = 1137
Score = 181 (68.8 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 71/233 (30%), Positives = 116/233 (49%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL---TD--SESVINLPD--EV-----YYKD----PVL 46
L+VQYRM+ I ++ Y+G+L +D + +VINLP+ +V +Y D P L
Sbjct: 899 LTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLPNFKDVKLELEFYADYSENPWL 958
Query: 47 -------RPYVFFDV--IHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT 97
P F + + E G VS N+ EAK V L K G
Sbjct: 959 IAAFEPNNPVCFLNTHKVPAPEQVEKGGVS--NIMEAKLVVFLTSVFIKA----GCKPSD 1012
Query: 98 VGIITPYKLQLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VG 156
+GII PY+ QLK + + S G + +NTVD +QG+++ ++++S VR++ G +G
Sbjct: 1013 IGIIAPYRQQLKVISDL---LAQSSVGM-VEVNTVDRYQGRDKSIVVVSFVRSNEDGTLG 1068
Query: 157 -FVADIRRMNVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMDS 208
+ D RR+NVA+TRA+ L ++G +L++ L+ + +D+ S
Sbjct: 1069 ELLKDWRRLNVAITRAKHKLILLGCVPSLSRYPPLRKLLNHLNSEKLIIDLPS 1121
>UNIPROTKB|P51530 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0005524
"ATP binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0042645
"mitochondrial nucleoid" evidence=IDA] [GO:0043504 "mitochondrial
DNA repair" evidence=IDA] [GO:0006264 "mitochondrial DNA
replication" evidence=IDA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IDA] [GO:0045740 "positive regulation of DNA
replication" evidence=IDA] [GO:0043137 "DNA replication, removal of
RNA primer" evidence=IDA] [GO:0006284 "base-excision repair"
evidence=IDA] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=IDA] [GO:0005760
"gamma DNA polymerase complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0000076 "DNA replication checkpoint"
evidence=IMP] [GO:0006260 "DNA replication" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IDA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000729 "DNA double-strand
break processing" evidence=IDA] [GO:0004518 "nuclease activity"
evidence=IDA] [GO:0043139 "5'-3' DNA helicase activity"
evidence=IDA] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0000722 "telomere maintenance via recombination" evidence=TAS]
[GO:0000723 "telomere maintenance" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006271 "DNA strand elongation
involved in DNA replication" evidence=TAS] [GO:0032201 "telomere
maintenance via semi-conservative replication" evidence=TAS]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0032508 "DNA
duplex unwinding" evidence=IDA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524 Reactome:REACT_115566
GO:GO:0005654 GO:GO:0046872 GO:GO:0006284 GO:GO:0003677
GO:GO:0051539 GO:GO:0042645 GO:GO:0000084 GO:GO:0016890
eggNOG:COG1112 GO:GO:0045740 GO:GO:0000722 GO:GO:0000729
GO:GO:0017108 Reactome:REACT_383 GO:GO:0000076 GO:GO:0043137
GO:GO:0043139 GO:GO:0043142 GO:GO:0043504 GO:GO:0006264
PANTHER:PTHR10887:SF14 CTD:1763 HOGENOM:HOG000168456
HOVERGEN:HBG081456 KO:K10742 EMBL:D42046 EMBL:AL136233
EMBL:BC041115 EMBL:BC053574 EMBL:BC063664 EMBL:BC111740
EMBL:BC028188 IPI:IPI00216142 IPI:IPI00816670 IPI:IPI00816801
PIR:T50697 RefSeq:NP_001073918.2 UniGene:Hs.532446
ProteinModelPortal:P51530 SMR:P51530 STRING:P51530
PhosphoSite:P51530 DMDM:119370373 PaxDb:P51530 PRIDE:P51530
Ensembl:ENST00000358410 Ensembl:ENST00000399179
Ensembl:ENST00000549829 GeneID:1763 KEGG:hsa:1763 UCSC:uc021prt.1
GeneCards:GC10M070173 HGNC:HGNC:2939 HPA:HPA037487 MIM:601810
neXtProt:NX_P51530 InParanoid:P51530 GenomeRNAi:1763 NextBio:7187
ArrayExpress:P51530 Bgee:P51530 CleanEx:HS_DNA2
Genevestigator:P51530 GermOnline:ENSG00000138346 GO:GO:0032201
Uniprot:P51530
Length = 1060
Score = 180 (68.4 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 75/237 (31%), Positives = 111/237 (46%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL---TD--SESVINL---PD-----EVY--YKD-PVL 46
L+VQYRM+ I ++ Y+G+L +D + +VINL D E Y Y D P L
Sbjct: 823 LTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLRHFKDVKLELEFYADYSDNPWL 882
Query: 47 -------RPYVFF--DVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT 97
P F D + E G VS NV EAK V L K G
Sbjct: 883 MGVFEPNNPVCFLNTDKVPAPEQVEKGGVS--NVTEAKLIVFLTSIFVKA----GCSPSD 936
Query: 98 VGIITPYKLQLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VG 156
+GII PY+ QLK + + E +NTVD +QG+++ ++++S VR++ G VG
Sbjct: 937 IGIIAPYRQQLKIINDLLARSIGMVE-----VNTVDKYQGRDKSIVLVSFVRSNKDGTVG 991
Query: 157 -FVADIRRMNVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMDSLPKE 212
+ D RR+NVA+TRA+ L ++G +L L+ + +D+ S E
Sbjct: 992 ELLKDWRRLNVAITRAKHKLILLGCVPSLNCYPPLEKLLNHLNSEKLIIDLPSREHE 1048
>UNIPROTKB|J3KPX5 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 EMBL:AL136233
HGNC:HGNC:2939 OMA:EHESLCH ProteinModelPortal:J3KPX5
Ensembl:ENST00000399180 Uniprot:J3KPX5
Length = 1146
Score = 180 (68.4 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 75/237 (31%), Positives = 111/237 (46%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL---TD--SESVINL---PD-----EVY--YKD-PVL 46
L+VQYRM+ I ++ Y+G+L +D + +VINL D E Y Y D P L
Sbjct: 909 LTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLRHFKDVKLELEFYADYSDNPWL 968
Query: 47 -------RPYVFF--DVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT 97
P F D + E G VS NV EAK V L K G
Sbjct: 969 MGVFEPNNPVCFLNTDKVPAPEQVEKGGVS--NVTEAKLIVFLTSIFVKA----GCSPSD 1022
Query: 98 VGIITPYKLQLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VG 156
+GII PY+ QLK + + E +NTVD +QG+++ ++++S VR++ G VG
Sbjct: 1023 IGIIAPYRQQLKIINDLLARSIGMVE-----VNTVDKYQGRDKSIVLVSFVRSNKDGTVG 1077
Query: 157 -FVADIRRMNVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMDSLPKE 212
+ D RR+NVA+TRA+ L ++G +L L+ + +D+ S E
Sbjct: 1078 ELLKDWRRLNVAITRAKHKLILLGCVPSLNCYPPLEKLLNHLNSEKLIIDLPSREHE 1134
>WB|WBGene00001258 [details] [associations]
symbol:emb-4 species:6239 "Caenorhabditis elegans"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0097157
"pre-mRNA intronic binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] InterPro:IPR024860 InterPro:IPR026300
PIRSF:PIRSF038901 GO:GO:0009792 GO:GO:0040010 GO:GO:0010171
GO:GO:0040011 GO:GO:0005681 GO:GO:0000398 eggNOG:COG1112
HOGENOM:HOG000170551 KO:K12874 OMA:RTKAVGH GO:GO:0097157
PANTHER:PTHR10887:SF5 GeneTree:ENSGT00700000104467 EMBL:AL132853
GeneID:180232 KEGG:cel:CELE_Y80D3A.2 CTD:180232
RefSeq:NP_001256831.1 ProteinModelPortal:Q9U1Q7 SMR:Q9U1Q7
PaxDb:Q9U1Q7 PRIDE:Q9U1Q7 EnsemblMetazoa:Y80D3A.2a.1
EnsemblMetazoa:Y80D3A.2a.2 UCSC:Y80D3A.2.1 WormBase:Y80D3A.2a
InParanoid:Q9U1Q7 NextBio:908508 ArrayExpress:Q9U1Q7 Uniprot:Q9U1Q7
Length = 1467
Score = 181 (68.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 43/138 (31%), Positives = 76/138 (55%)
Query: 48 PYVFFDV--IHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYK 105
P+ F D+ +G + YQN+ EA++ LY ++ + +G + I+T Y
Sbjct: 1178 PFQFIDIPDFNGHGETQPSPHFYQNLGEAEYACALYTYM----RILGYPAEKISILTTYN 1233
Query: 106 LQLKCLQHEFRNVLNSEE--GKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRR 163
Q + ++ F+ ++ G ++TVD +QGQ+ D II+S V+ N +G + D+RR
Sbjct: 1234 GQAQLIRDVFQRRCDTNPLIGMPAKVSTVDKYQGQQNDFIILSLVKTRN--IGHIRDVRR 1291
Query: 164 MNVALTRARRALWVMGNA 181
+ VAL+RAR L+V+G +
Sbjct: 1292 LVVALSRARLGLYVLGRS 1309
>ZFIN|ZDB-GENE-070424-144 [details] [associations]
symbol:si:ch211-183d5.1 "si:ch211-183d5.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR026855 ZFIN:ZDB-GENE-070424-144
GO:GO:0004386 PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:AL935128 IPI:IPI00492493 Ensembl:ENSDART00000144897
Uniprot:F1QAI5
Length = 517
Score = 175 (66.7 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 63/225 (28%), Positives = 108/225 (48%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRL-TDSE-SVINLPDEVYYKDPVLRPYVFFDVIHGRE 59
+L QYRMH I FPS FY G+L T +E L ++ K+P + F I G+E
Sbjct: 265 MLDTQYRMHAEICSFPSDEFYDGKLKTGAERGPCCLLNKS--KEPTA---MLFGHIEGKE 319
Query: 60 ------SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH 113
+ +G S N +EA+ VC+ + L +K G+ + I+TPY Q+ ++
Sbjct: 320 VSLVVSTEKGNENSMANTEEAEQAVCVADLL---IKQSGVSPEHIAILTPYNAQVSEIKM 376
Query: 114 --EFRNVLN-------SEEGKD---LYINTVDAFQGQERDVIIMSCVRA-SNHGVGFVAD 160
E +NV N +G + + ++TV + + + +A +GFV D
Sbjct: 377 TLEKKNVRNVTVCTVMKSQGSEWPYVIVSTVRSCSTSDIQAYRVRPHKAWLGKRLGFVTD 436
Query: 161 IRRMNVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMD 205
++NVA+TRA+ L ++GN+ L + W L+ ++C ++
Sbjct: 437 ANQVNVAITRAQDGLCILGNSDLLRCCELWDRLLDHYYRKSCVVN 481
>WB|WBGene00016566 [details] [associations]
symbol:eri-7 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0019079 "viral
genome replication" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR003593 SMART:SM00382 GO:GO:0000166 GO:GO:0000003
GO:GO:0017111 InterPro:IPR014001 SMART:SM00487 EMBL:FO080509
GeneTree:ENSGT00700000104572 PIR:T28788 RefSeq:NP_491374.2
ProteinModelPortal:O01976 SMR:O01976 EnsemblMetazoa:C41D11.7
GeneID:172047 KEGG:cel:CELE_C41D11.7 UCSC:C41D11.7.1 CTD:172047
WormBase:C41D11.7 InParanoid:O01976 OMA:NDEEMIN NextBio:873807
ArrayExpress:O01976 Uniprot:O01976
Length = 625
Score = 179 (68.1 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 50/143 (34%), Positives = 76/143 (53%)
Query: 49 YVFFDVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQL 108
+ FD ++ +G SY N+ EAK + H Q+ LK G+ + IITPYK Q
Sbjct: 373 HAVFDTNSINKTKQG--FSYANLAEAKIAI---GHYQRLLK-YGVQPSDIAIITPYKGQT 426
Query: 109 KC---LQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRM 164
L EF + I TVD+ QG+E +V+I + VR++ +GFV+++RR+
Sbjct: 427 SLVTKLMEEFGAETGYTDFVQTTIGTVDSVQGKEYEVVIFTMVRSNPRKTMGFVSELRRL 486
Query: 165 NVALTRARRALWVMGNAGALTQS 187
NV +TRA+R +GN L +S
Sbjct: 487 NVVITRAKRHFMFIGNGYLLAES 509
Score = 38 (18.4 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRL-TD 28
++L QYR + I + + FY +L TD
Sbjct: 299 IMLENQYRSNAKIATWSNTCFYHNQLKTD 327
>UNIPROTKB|E2QSH2 [details] [associations]
symbol:E2QSH2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
Ensembl:ENSCAFT00000021752 Uniprot:E2QSH2
Length = 1040
Score = 178 (67.7 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 67/211 (31%), Positives = 108/211 (51%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL---TD--SESVINLPD--EV-----YYKD----PVL 46
L+VQYRM+ I ++ Y G+L +D + +V+NLP+ +V +Y D P +
Sbjct: 822 LTVQYRMNSKIMSLSNKLTYDGKLECGSDKVANAVVNLPNLKDVKLELEFYADYSENPWM 881
Query: 47 -------RPYVFF--DVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT 97
P F D + E G VS N+ EAK V L K G
Sbjct: 882 IGAFEPNNPVCFLNTDKVPAPEQVEKGGVS--NITEAKLIVFLTSVFIKA----GCKPSD 935
Query: 98 VGIITPYKLQLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VG 156
+GII PY+ QLK + ++L + + +NTVD +QG+++ +I++S VR++ G +G
Sbjct: 936 IGIIAPYRQQLKIIN----DLLFHSSIRMVEVNTVDKYQGRDKSIILVSFVRSNKDGPIG 991
Query: 157 -FVADIRRMNVALTRARRALWVMGNAGALTQ 186
+ D RR+NVA+TRA+ L ++G +L +
Sbjct: 992 ELLKDWRRLNVAITRAKHKLILLGCVPSLNR 1022
>ZFIN|ZDB-GENE-090313-71 [details] [associations]
symbol:dna2 "DNA replication helicase 2 homolog
(yeast)" species:7955 "Danio rerio" [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA;ISS] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
[GO:0006264 "mitochondrial DNA replication" evidence=ISS]
[GO:0043137 "DNA replication, removal of RNA primer" evidence=ISS]
[GO:0016890 "site-specific endodeoxyribonuclease activity, specific
for altered base" evidence=ISS] [GO:0005760 "gamma DNA polymerase
complex" evidence=ISS] [GO:0006284 "base-excision repair"
evidence=ISS] [GO:0045740 "positive regulation of DNA replication"
evidence=ISS] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
ZFIN:ZDB-GENE-090313-71 GO:GO:0017108 GO:GO:0043142 GO:GO:0033567
PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852 EMBL:BX530068
IPI:IPI00901582 Ensembl:ENSDART00000109798 ArrayExpress:F1Q892
Bgee:F1Q892 Uniprot:F1Q892
Length = 1378
Score = 179 (68.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 69/210 (32%), Positives = 103/210 (49%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLT-DSE----SVINLPD--------EVYYKDP----- 44
L+VQYRM+ I + Y+GRL SE +V+ LP E+Y P
Sbjct: 1140 LNVQYRMNSAIMSLSNALMYEGRLECGSEKTANAVLQLPSRAQAEEELELYVCQPQYSAW 1199
Query: 45 ---VLRP---YVFFDV--IHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKV 96
L P F D + E+ +S N EA L + L L G
Sbjct: 1200 VQAALEPNSPVCFLDTSEVPAPETVEKSGIS--NHTEA----VLVQGLVTLLLKAGCRAC 1253
Query: 97 TVGIITPYKLQLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-V 155
+G+I PY+ QLK + ++L + K L +NTVD +QG+++ VII+S VR++ G +
Sbjct: 1254 DIGVIAPYRQQLKVIS----SLLQGDAFKALEVNTVDKYQGRDKSVIIVSFVRSNAEGNL 1309
Query: 156 G-FVADIRRMNVALTRARRALWVMGNAGAL 184
G + D RR+NVA+TRA+ L ++G+A L
Sbjct: 1310 GELLQDWRRLNVAITRAKHKLLMLGSAPTL 1339
>MGI|MGI:2443732 [details] [associations]
symbol:Dna2 "DNA replication helicase 2 homolog (yeast)"
species:10090 "Mus musculus" [GO:0000076 "DNA replication
checkpoint" evidence=ISO] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000729 "DNA double-strand break processing"
evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678
"DNA helicase activity" evidence=ISO] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0004518 "nuclease activity" evidence=ISO]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006260 "DNA
replication" evidence=ISO] [GO:0006264 "mitochondrial DNA
replication" evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0008152
"metabolic process" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=ISO] [GO:0017108
"5'-flap endonuclease activity" evidence=ISO] [GO:0032508 "DNA
duplex unwinding" evidence=ISO] [GO:0033567 "DNA replication,
Okazaki fragment processing" evidence=ISO] [GO:0042645
"mitochondrial nucleoid" evidence=ISO] [GO:0043137 "DNA
replication, removal of RNA primer" evidence=ISO] [GO:0043139
"5'-3' DNA helicase activity" evidence=ISO] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISO]
[GO:0043504 "mitochondrial DNA repair" evidence=ISO] [GO:0045740
"positive regulation of DNA replication" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster
binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] InterPro:IPR026851 InterPro:IPR014808
MGI:MGI:2443732 Pfam:PF08696 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0042645 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0000729 GO:GO:0017108 GO:GO:0000076 GO:GO:0043137
GO:GO:0005760 GO:GO:0043139 GO:GO:0043142 GO:GO:0043504
GO:GO:0006264 PANTHER:PTHR10887:SF14 CTD:1763 HOGENOM:HOG000168456
HOVERGEN:HBG081456 KO:K10742 EMBL:AK129051 EMBL:AK028381
EMBL:BC025182 EMBL:BC115716 IPI:IPI00224915 IPI:IPI00816966
RefSeq:NP_796346.2 UniGene:Mm.21492 ProteinModelPortal:Q6ZQJ5
SMR:Q6ZQJ5 STRING:Q6ZQJ5 PaxDb:Q6ZQJ5 PRIDE:Q6ZQJ5
Ensembl:ENSMUST00000092462 Ensembl:ENSMUST00000131422 GeneID:327762
KEGG:mmu:327762 UCSC:uc007fji.2 UCSC:uc007fjj.2
GeneTree:ENSGT00550000074852 InParanoid:Q6ZQJ5 OMA:EHESLCH
ChiTaRS:DNA2 NextBio:397947 Bgee:Q6ZQJ5 CleanEx:MM_DNA2
Genevestigator:Q6ZQJ5 GermOnline:ENSMUSG00000036875 Uniprot:Q6ZQJ5
Length = 1062
Score = 170 (64.9 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 51/162 (31%), Positives = 81/162 (50%)
Query: 53 DVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQ 112
D + E G VS NV EA+ L L T G +G+I PY+ QL+ +
Sbjct: 899 DKVPAPEQVENGGVS--NVTEAR----LIVFLTSTFIKAGCSPSDIGVIAPYRQQLRIIS 952
Query: 113 HEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VG-FVADIRRMNVALTR 170
+ S G + +NTVD +QG+++ +I++S VR++ G +G + D RR+NVALTR
Sbjct: 953 DL---LARSSVGM-VEVNTVDKYQGRDKSLILVSFVRSNEDGTLGELLKDWRRLNVALTR 1008
Query: 171 ARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMDSLPKE 212
A+ L ++G+ +L + L A +D+ S E
Sbjct: 1009 AKHKLILLGSVSSLKRFPPLGTLFDHLNAEQLILDLPSREHE 1050
Score = 50 (22.7 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLT-DSESVIN 34
L+VQYRM+ I ++ Y G+L S+ V N
Sbjct: 824 LTVQYRMNRKIMSLSNKLTYAGKLECGSDRVAN 856
Score = 43 (20.2 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 11/44 (25%), Positives = 22/44 (50%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVL 46
L +++HP I+ F + R S+ +L +E+Y P++
Sbjct: 700 LGQSHKVHPDIQKFTEEEICRSR--SIASLAHL-EELYNSHPIV 740
>UNIPROTKB|F1PYQ4 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 EMBL:AAEX03002775 EMBL:AAEX03002776
EMBL:AAEX03002777 Ensembl:ENSCAFT00000036654 Uniprot:F1PYQ4
Length = 997
Score = 174 (66.3 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 63/213 (29%), Positives = 106/213 (49%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL---TD--SESVINLPDEVYYKDPVLRPYVFFDVIHG 57
L+VQYRM+ I ++ Y G+L +D + +V+NLP+ KD L + D +
Sbjct: 795 LTVQYRMNSKIMSLSNKLTYDGKLECGSDKVANAVVNLPN---LKDVKLELEFYAD--YS 849
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
G+ N VC T K+ G +GII PY+ QLK + +
Sbjct: 850 ENPWMIGAFEPNNP------VCFLN----TDKA-GCKPSDIGIIAPYRQQLKIIN----D 894
Query: 118 VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VG-FVADIRRMNVALTRARRAL 175
+L + + +NTVD +QG+++ +I++S VR++ G +G + D RR+NVA+TRA+ L
Sbjct: 895 LLFHSSIRMVEVNTVDKYQGRDKSIILVSFVRSNKDGPIGELLKDWRRLNVAITRAKHKL 954
Query: 176 WVMGNAGALTQSDDWAALIADSKARNCYMDMDS 208
++G +L + L+ + MD+ S
Sbjct: 955 ILLGCVPSLNRYPPLGKLLHHLNSEKKIMDLPS 987
>POMBASE|SPCC1739.03 [details] [associations]
symbol:hrr1 "Helicase Required for RNAi-mediated
heterochromatin assembly Hrr1" species:4896 "Schizosaccharomyces
pombe" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0030702
"chromatin silencing at centromere" evidence=IMP] [GO:0031048
"chromatin silencing by small RNA" evidence=IMP] [GO:0031379
"RNA-directed RNA polymerase complex" evidence=IDA] [GO:0031380
"nuclear RNA-directed RNA polymerase complex" evidence=IDA]
PomBase:SPCC1739.03 GO:GO:0005829 GO:GO:0005524 GO:GO:0007059
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003723 GO:GO:0006338
GO:GO:0007049 GO:GO:0030702 GO:GO:0004386 GO:GO:0031048
eggNOG:COG1112 GO:GO:0016585 GO:GO:0031380 PIR:T41111
RefSeq:NP_588411.2 DIP:DIP-29303N STRING:O74465
EnsemblFungi:SPCC1739.03.1 GeneID:2539248 OrthoDB:EOG4DRDMD
NextBio:20800418 Uniprot:O74465
Length = 999
Score = 174 (66.3 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 61/194 (31%), Positives = 97/194 (50%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESHR 62
L++Q RMHP IR S Y+ L+D E P + + R FF + H R
Sbjct: 775 LTMQRRMHPQIRRLVSS-VYED-LSDYEITKYWPS-IPGMGEIRR---FF-LTHSRIEDN 827
Query: 63 GGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSE 122
G S N+ EA+ V +L G+ + +T Y Q ++ LN E
Sbjct: 828 DGFASKINLFEAQMLVQFAVYLINN----GVEPQKITCLTFYAAQKDLIERLLSESLNRE 883
Query: 123 EGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMGNA 181
+ + + TVD +QG+E DV+++S VR ++ VGF++ R+ V+L+RARR L++ GNA
Sbjct: 884 K-HFIKVATVDGYQGEENDVVLLSLVRNNDRTEVGFLSSPHRVCVSLSRARRGLFIFGNA 942
Query: 182 GALTQSDD--WAAL 193
+ +S+ W A+
Sbjct: 943 QLVAESNPLWWDAI 956
>FB|FBgn0041164 [details] [associations]
symbol:armi "armitage" species:7227 "Drosophila melanogaster"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=ISS;IMP] [GO:0007319 "negative
regulation of oskar mRNA translation" evidence=IMP] [GO:0000578
"embryonic axis specification" evidence=NAS;IMP] [GO:0016325
"oocyte microtubule cytoskeleton organization" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007317 "regulation of
pole plasm oskar mRNA localization" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0003678 "DNA helicase activity"
evidence=NAS] [GO:0030425 "dendrite" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0007616 "long-term memory"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0045202
"synapse" evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0046843 "dorsal appendage
formation" evidence=IMP] [GO:0007318 "pole plasm protein
localization" evidence=IMP] [GO:0070725 "Yb body" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] GO:GO:0005524
GO:GO:0005737 EMBL:AE014296 GO:GO:0016246 GO:GO:0000184
GO:GO:0030424 GO:GO:0043025 GO:GO:0030425 GO:GO:0007616
GO:GO:0045202 GO:GO:0007318 eggNOG:COG1112 EMBL:AY598469
RefSeq:NP_001014556.1 RefSeq:NP_647816.2 ProteinModelPortal:Q6J5K9
SMR:Q6J5K9 IntAct:Q6J5K9 STRING:Q6J5K9 PaxDb:Q6J5K9 GeneID:38427
KEGG:dme:Dmel_CG11513 UCSC:CG11513-RA CTD:38427 FlyBase:FBgn0041164
InParanoid:Q6J5K9 OMA:ITISTCT OrthoDB:EOG4DZ094 PhylomeDB:Q6J5K9
GenomeRNAi:38427 NextBio:808602 Bgee:Q6J5K9 GermOnline:CG11513
GO:GO:0070725 GO:GO:0003678 GO:GO:0046843 GO:GO:0031023
InterPro:IPR026122 PANTHER:PTHR10887:SF17 Uniprot:Q6J5K9
Length = 1274
Score = 173 (66.0 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 75/231 (32%), Positives = 105/231 (45%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLT------DS-ES-VINLPDEVYY--KD-PVLRPYVF 51
L YR P I SR FY L DS ES +++ V+ KD P F
Sbjct: 1030 LLYNYRALPSIMSIYSRLFYDDELIPVLSEKDSRESRLLSKLRCVFESEKDIPQAHGTFF 1089
Query: 52 FDVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL 111
+ +I G S S+ N E + V L + L + +GIITPY+ Q+K L
Sbjct: 1090 YGII-GENRQNNDSPSWFNPQEVR-EVFL---MTIALYRANVTADQIGIITPYQKQVKML 1144
Query: 112 QHEFRNVLNSEEGKDLY---INTVDAFQGQERDVIIMSCVRASNH--------GVGFVAD 160
+ F G D+ I +V+ FQGQERD+I++S VR+S +GFV
Sbjct: 1145 RSMFI-------GTDVVMPKIGSVEEFQGQERDIILISTVRSSEEILRMDARFSLGFVRC 1197
Query: 161 IRRMNVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMDSLPK 211
+R+NVA++RAR + + GN L + W LI N Y D LP+
Sbjct: 1198 SKRLNVAVSRARAMMIIFGNPHLLAVDECWRQLILFCVKNNAYFGCD-LPQ 1247
>UNIPROTKB|F1NNW1 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9031
"Gallus gallus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IEA] GO:GO:0000932 GO:GO:0035279
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 OMA:VRFFKLD IPI:IPI00594294
EMBL:AADN02045008 Ensembl:ENSGALT00000002368 Uniprot:F1NNW1
Length = 735
Score = 167 (63.8 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 56/187 (29%), Positives = 95/187 (50%)
Query: 48 PYVFFDVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT---VGIITPY 104
P +F V G + S S+ N E + V + L ++ G ++ +GII+PY
Sbjct: 540 PIIFHGVC-GEDEREAKSPSFFNTAEIEVVVQYLQKLLQSQGRRGCPTISPKEIGIISPY 598
Query: 105 KLQLKCLQHEFRN---VLNS-EEGKDLYINTVDAFQGQERDVIIMSCVRASNH------- 153
+ Q++ ++ + VL + + L + +V+ FQGQER VI++S VR+ +
Sbjct: 599 RKQVEKIRLAITSKDPVLRALPDIGQLKVGSVEEFQGQERRVILISTVRSCSEYLQLDQT 658
Query: 154 -GVGFVADIRRMNVALTRARRALWVMGNAGALTQSDDWAALIA---DSKARNCYMDMDSL 209
+GF+ + +R+NVALTRA+ L V+GNA L++ W + D A Y +
Sbjct: 659 FRLGFLKNPKRLNVALTRAKALLIVVGNAAVLSKDPHWHRFLRYCRDEGAYRGYPYEEEP 718
Query: 210 PKEFSVA 216
P+E S+A
Sbjct: 719 PEEDSLA 725
Score = 121 (47.7 bits), Expect = 0.00037, P = 0.00037
Identities = 50/161 (31%), Positives = 80/161 (49%)
Query: 7 YRMHPHIRDFPSRHFYQGRLTDSESVINLPD--EVY--YKDPVLR--PYVFFDVIHGRES 60
YR H I P+ FY L E + PD Y +++ R P +F V G +
Sbjct: 495 YRSHKAILKVPNELFYDSELKAYEG--SEPDVRNFYCTWEELPNRGVPIIFHGVC-GEDE 551
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMG------LGKVTVGIITPYKLQLKCLQHE 114
S S+ N E + V ++LQK L+S G + +GII+PY+ Q++ ++
Sbjct: 552 REAKSPSFFNTAEIEVVV---QYLQKLLQSQGRRGCPTISPKEIGIISPYRKQVEKIRLA 608
Query: 115 FRN---VLNS--EEGKDLYINTVDAFQGQERDVIIMSCVRA 150
+ VL + + G+ L + +V+ FQGQER VI++S VR+
Sbjct: 609 ITSKDPVLRALPDIGQ-LKVGSVEEFQGQERRVILISTVRS 648
>ZFIN|ZDB-GENE-070912-617 [details] [associations]
symbol:si:dkey-97a13.6 "si:dkey-97a13.6"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR026855
Pfam:PF00773 SMART:SM00382 SMART:SM00955 ZFIN:ZDB-GENE-070912-617
GO:GO:0005524 GO:GO:0003723 GO:GO:0004386 GO:GO:0004540
PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391 EMBL:BX663525
IPI:IPI00499390 RefSeq:XP_699251.2 UniGene:Dr.89869
Ensembl:ENSDART00000017829 GeneID:570654 KEGG:dre:570654
NextBio:20890238 Uniprot:E7F3B1
Length = 2781
Score = 173 (66.0 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 67/237 (28%), Positives = 102/237 (43%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLT----DSESVINLPDEVYYKDPVLRPYVFFDVIH 56
++L QYRMH I FPS +Y L + SV+N E + R + F I
Sbjct: 2554 IMLDTQYRMHEEICKFPSEAYYNDMLKTVVRERTSVLNAETEGRRQSK--R--ILFGDIR 2609
Query: 57 GRE------SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT---VGIITPYKLQ 107
G E + RG S N DE K V + ++ + +G+V + I++PY Q
Sbjct: 2610 GEEIGLVVSTARGNENSKANFDEVKKAV------EICIQLVTVGRVRPEDIAILSPYNAQ 2663
Query: 108 LKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRA---------------SN 152
+ + R L+ E K + T+ QG E +I+S VR+ S
Sbjct: 2664 VA----QIRERLSDFELKGFTVTTITKSQGSEWQYVILSIVRSCPSDEIEPMPSREWLSK 2719
Query: 153 HGVGFVADIRRMNVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMDSL 209
H +GFV D ++NV +TRA+ L ++GN L S W L+ C + D +
Sbjct: 2720 H-IGFVGDENQINVGITRAQVGLCILGNQAVLNCSPAWQKLLKHYSGHGCVVTADQI 2775
>UNIPROTKB|Q5ZKD7 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4
CTD:4343 EMBL:AJ720147 IPI:IPI00594294 RefSeq:NP_001012861.1
UniGene:Gga.1182 ProteinModelPortal:Q5ZKD7 STRING:Q5ZKD7
PRIDE:Q5ZKD7 GeneID:419872 KEGG:gga:419872 InParanoid:Q5ZKD7
NextBio:20822865 Uniprot:Q5ZKD7
Length = 967
Score = 167 (63.8 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 56/187 (29%), Positives = 95/187 (50%)
Query: 48 PYVFFDVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT---VGIITPY 104
P +F V G + S S+ N E + V + L ++ G ++ +GII+PY
Sbjct: 772 PIIFHGVC-GEDEREAKSPSFFNTAEIEVVVQYLQKLLQSQGRRGCPTISPKEIGIISPY 830
Query: 105 KLQLKCLQHEFRN---VLNS-EEGKDLYINTVDAFQGQERDVIIMSCVRASNH------- 153
+ Q++ ++ + VL + + L + +V+ FQGQER VI++S VR+ +
Sbjct: 831 RKQVEKIRLAITSKDPVLRALPDIGQLKVGSVEEFQGQERRVILISTVRSCSEYLQLDQT 890
Query: 154 -GVGFVADIRRMNVALTRARRALWVMGNAGALTQSDDWAALIA---DSKARNCYMDMDSL 209
+GF+ + +R+NVALTRA+ L V+GNA L++ W + D A Y +
Sbjct: 891 FRLGFLKNPKRLNVALTRAKALLIVVGNAAVLSKDPHWHRFLRYCRDEGAYRGYPYEEEP 950
Query: 210 PKEFSVA 216
P+E S+A
Sbjct: 951 PEEDSLA 957
Score = 121 (47.7 bits), Expect = 0.00052, P = 0.00052
Identities = 50/161 (31%), Positives = 80/161 (49%)
Query: 7 YRMHPHIRDFPSRHFYQGRLTDSESVINLPD--EVY--YKDPVLR--PYVFFDVIHGRES 60
YR H I P+ FY L E + PD Y +++ R P +F V G +
Sbjct: 727 YRSHKAILKVPNELFYDSELKAYEG--SEPDVRNFYCTWEELPNRGVPIIFHGVC-GEDE 783
Query: 61 HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMG------LGKVTVGIITPYKLQLKCLQHE 114
S S+ N E + V ++LQK L+S G + +GII+PY+ Q++ ++
Sbjct: 784 REAKSPSFFNTAEIEVVV---QYLQKLLQSQGRRGCPTISPKEIGIISPYRKQVEKIRLA 840
Query: 115 FRN---VLNS--EEGKDLYINTVDAFQGQERDVIIMSCVRA 150
+ VL + + G+ L + +V+ FQGQER VI++S VR+
Sbjct: 841 ITSKDPVLRALPDIGQ-LKVGSVEEFQGQERRVILISTVRS 880
>UNIPROTKB|G4MK85 [details] [associations]
symbol:MGG_02491 "DNA replication ATP-dependent helicase
dna2" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0004386 EMBL:CM001231 GO:GO:0017108 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742 InterPro:IPR022765
Pfam:PF01930 RefSeq:XP_003709288.1 ProteinModelPortal:G4MK85
EnsemblFungi:MGG_02491T0 GeneID:2681588 KEGG:mgr:MGG_02491
Uniprot:G4MK85
Length = 1689
Score = 169 (64.5 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 69/250 (27%), Positives = 117/250 (46%)
Query: 18 SRHFYQGR----LTDSESVINLPDEV----------YYKDPVLR-PYVFFDVI-HGRESH 61
SRH Y L+ S+ V +LP + DP R +V D + RE
Sbjct: 1389 SRHHYDASSFMSLSRSQPVFSLPKSFCTDGNSCWLRHLVDPDTRVAFVNTDALPDSREEA 1448
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNS 121
+G + N EA+ V L E +L ++G+ +G++T Y+ QL L+H+ N+
Sbjct: 1449 KGNRIV--NPVEAQLVVQLVE----SLMTLGVPANEIGVMTHYRSQLALLKHKLLRGKNT 1502
Query: 122 EEGKDLYINTVDAFQGQERDVIIMSCVRASN--HGVGFVADIRRMNVALTRARRALWVMG 179
+ + ++T D FQG++++V+++S VR++ H + D RR+NVA TRA+ L V+G
Sbjct: 1503 GDATAVEMHTADRFQGRDKEVVVLSLVRSNEACHIGDLLRDWRRINVAFTRAKTKLLVIG 1562
Query: 180 NAGALTQ--SDDWAA-LIADSKARN--CYMDMDSLPKEF--SVALAAKAPGYGPLQGKIP 232
+ L +D+ + + + RN C + D+L +AA P Q P
Sbjct: 1563 SRETLRGCGADEMLSKFVRLMEDRNWVCDLPADALESHLFEDGGIAATGTTIAPTQAS-P 1621
Query: 233 HNARGLRSAG 242
++AG
Sbjct: 1622 RRKPPNKTAG 1631
>ZFIN|ZDB-GENE-040426-1189 [details] [associations]
symbol:aqr "aquarius homolog (mouse)" species:7955
"Danio rerio" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 ZFIN:ZDB-GENE-040426-1189
GO:GO:0005681 GO:GO:0000398 CTD:9716 HOGENOM:HOG000170551
HOVERGEN:HBG080430 KO:K12874 GO:GO:0097157 PANTHER:PTHR10887:SF5
EMBL:BC160661 IPI:IPI00861759 RefSeq:NP_956758.2 UniGene:Dr.17308
ProteinModelPortal:B1H1M2 DNASU:393436 GeneID:393436
KEGG:dre:393436 eggNOG:NOG272077 NextBio:20814473
ArrayExpress:B1H1M2 Uniprot:B1H1M2
Length = 1525
Score = 168 (64.2 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 47/157 (29%), Positives = 79/157 (50%)
Query: 68 YQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQ---HEFRNVLNSEEG 124
YQN+ EA++ V LY ++ + +G + I+T Y Q ++ H+ R NS G
Sbjct: 1197 YQNLAEAEYSVALYMYM----RLLGYPAERISILTTYNGQKHLIRDVIHQ-RCASNSFFG 1251
Query: 125 KDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNAGAL 184
+ + TVD FQGQ+ D II+S VR VG + D+RR+ VA++RAR L++
Sbjct: 1252 QPSKVTTVDRFQGQQNDYIILSLVRTK--AVGHLRDVRRLVVAMSRARLGLYIFARVSLF 1309
Query: 185 TQSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKA 221
+ + AR ++ + P E+ + A++
Sbjct: 1310 QNCYELTPAFSQLTARPLHLHIR--PHEYYTSTEARS 1344
>SGD|S000000978 [details] [associations]
symbol:ECM32 "DNA dependent ATPase/DNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003678
"DNA helicase activity" evidence=IDA] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0006449 "regulation of translational
termination" evidence=IMP] [GO:0005844 "polysome" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] SGD:S000000978 GO:GO:0005524 GO:GO:0005737
GO:GO:0003677 GO:GO:0003723 EMBL:BK006939 GO:GO:0005844
eggNOG:COG1112 GeneTree:ENSGT00700000104467 InterPro:IPR014001
SMART:SM00487 GO:GO:0003678 EMBL:U18922 GO:GO:0003724 PIR:S30862
RefSeq:NP_011103.1 ProteinModelPortal:P32644 SMR:P32644
DIP:DIP-5404N IntAct:P32644 MINT:MINT-499764 STRING:P32644
PaxDb:P32644 PeptideAtlas:P32644 EnsemblFungi:YER176W GeneID:856923
KEGG:sce:YER176W CYGD:YER176w HOGENOM:HOG000094475 OMA:KDTPRGT
OrthoDB:EOG4P8JS8 NextBio:983389 Genevestigator:P32644
GermOnline:YER176W GO:GO:0006449 Uniprot:P32644
Length = 1121
Score = 166 (63.5 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 37/76 (48%), Positives = 49/76 (64%)
Query: 117 NVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRAL 175
NV+N G L++ TVD+FQG E+ II SCVR + +GF+ D RR+NVALTRA+ L
Sbjct: 1028 NVINIING--LHVATVDSFQGHEKSFIIFSCVRNNTENKIGFLRDKRRLNVALTRAKHGL 1085
Query: 176 WVMGNAGALTQSDD-W 190
V+GN L + D W
Sbjct: 1086 IVVGNKNVLRKGDPLW 1101
>UNIPROTKB|Q4S102 [details] [associations]
symbol:GSTENG00025786001 "Chromosome 5 SCAF14773, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0006264 "mitochondrial DNA replication" evidence=ISS]
[GO:0006284 "base-excision repair" evidence=ISS] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=ISS] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISS] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=ISS] [GO:0045740 "positive regulation of DNA replication"
evidence=ISS] [GO:0005760 "gamma DNA polymerase complex"
evidence=ISS] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0006284 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0017108 GO:GO:0043137 GO:GO:0043142 GO:GO:0006264
PANTHER:PTHR10887:SF14 HOVERGEN:HBG081456 EMBL:CAAE01014773
ProteinModelPortal:Q4S102 STRING:Q4S102 Uniprot:Q4S102
Length = 1043
Score = 162 (62.1 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 63/204 (30%), Positives = 106/204 (51%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLT-DSE----SVINLP------DEV----YYKDPVL- 46
L+VQYRM+ I + Y+GRL SE S+I LP E+ + + +L
Sbjct: 829 LNVQYRMNRQIMSLSNSLMYEGRLECGSERTATSLITLPLLPSVLPELGSLAWIQATLLP 888
Query: 47 -RPYVFFD--VIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITP 103
P F D + E+ G +S N EA +++ L +K+ G +G+I P
Sbjct: 889 SNPVCFLDCSAVPALETVEQGGIS--NHTEAAL---IHKLLLLLIKA-GCKPGDIGVIAP 942
Query: 104 YKLQLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRAS-NHG-VG-FVAD 160
Y+ QL+ + +L + + +NTVD +QG+++ +I++S VR++ G +G + D
Sbjct: 943 YRQQLRTIS----GLLQASAFTGVEVNTVDRYQGRDKSLILLSFVRSTAEEGPLGELLKD 998
Query: 161 IRRMNVALTRARRALWVMGNAGAL 184
RR+NVA+TRA+ L ++G+A L
Sbjct: 999 WRRLNVAITRAKSKLLMLGSATTL 1022
>CGD|CAL0001700 [details] [associations]
symbol:orf19.702 species:5476 "Candida albicans" [GO:0003678
"DNA helicase activity" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0006449 "regulation of translational termination"
evidence=IEA] InterPro:IPR003593 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
SMART:SM00382 CGD:CAL0001700 GO:GO:0005524 GO:GO:0008270
GO:GO:0005622 GO:GO:0017111 eggNOG:COG1112 EMBL:AACQ01000183
EMBL:AACQ01000182 RefSeq:XP_711775.1 RefSeq:XP_711793.1
ProteinModelPortal:Q59PZ8 GeneID:3646609 GeneID:3646623
KEGG:cal:CaO19.702 KEGG:cal:CaO19.8321 Uniprot:Q59PZ8
Length = 1105
Score = 160 (61.4 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 35/84 (41%), Positives = 53/84 (63%)
Query: 127 LYINTVDAFQGQERDVIIMSCVRASNHGV-GFVADIRRMNVALTRARRALWVMGNAGALT 185
+ I ++DAFQG+E+D +IMSCVR++ GV GF+ D RR+NVALTRA+ L ++G+ L
Sbjct: 1019 IMIASIDAFQGREKDYMIMSCVRSNTKGVIGFLRDERRLNVALTRAKYGLIMVGDKKCLQ 1078
Query: 186 QSDD-WAALIADSKARNCYMDMDS 208
D W + ++ D D+
Sbjct: 1079 NGDKLWKEYLQYLDSKKAIHDNDT 1102
>FB|FBgn0051368 [details] [associations]
symbol:CG31368 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA;IC]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 EMBL:AE014297 GO:GO:0016787
GO:GO:0071011 GO:GO:0000398 eggNOG:COG1112 KO:K12874 OMA:RTKAVGH
GO:GO:0071013 GO:GO:0097157 PANTHER:PTHR10887:SF5
GeneTree:ENSGT00700000104467 RefSeq:NP_996198.2 UniGene:Dm.10009
ProteinModelPortal:Q7KSN8 SMR:Q7KSN8 PaxDb:Q7KSN8
EnsemblMetazoa:FBtr0301042 GeneID:41437 KEGG:dme:Dmel_CG31368
UCSC:CG31368-RB FlyBase:FBgn0051368 InParanoid:Q7KSN8
OrthoDB:EOG43XSJ9 PhylomeDB:Q7KSN8 GenomeRNAi:41437 NextBio:823855
ArrayExpress:Q7KSN8 Bgee:Q7KSN8 Uniprot:Q7KSN8
Length = 1486
Score = 161 (61.7 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 58/212 (27%), Positives = 101/212 (47%)
Query: 68 YQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSEEGKDL 127
YQN+ EA++ V +Y ++ + +G + I+T Y Q +H R+V+N+ G +
Sbjct: 1214 YQNLAEAEYIVAVYMYM----RLLGYPAAKISILTTYNGQ----KHLIRDVINARCGNNP 1265
Query: 128 YIN------TVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNA 181
I TVD +QGQ+ D I++S VR VG + D+RR+ VA++RAR L+V G
Sbjct: 1266 LIGWPHKITTVDKYQGQQNDYILISLVRTK--AVGHLRDVRRLVVAMSRARLGLYVFGRV 1323
Query: 182 GALT---QSDDWAALIADSKARNCYMDMDSLPKEFSVALAAKAPGYGPLQGKIPHNARGL 238
+ L+ + + D P + LA+ A ++ + + +
Sbjct: 1324 SLFKNCLELQQTFKLLTQRPLKLSLVPEDKFPTD---RLASAAVASQDIK-TVENMSEMA 1379
Query: 239 RSAGQRHRSFDMNMESRSGT-PSEDDEKVSRN 269
+ +R+ + ME GT PSE++ + RN
Sbjct: 1380 QFVYERYMA---KMEELKGTLPSEEELEAMRN 1408
>UNIPROTKB|F8VR31 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 EMBL:AL136233
HGNC:HGNC:2939 IPI:IPI01022599 ProteinModelPortal:F8VR31
Ensembl:ENST00000551118 UCSC:uc001jog.2 ArrayExpress:F8VR31
Bgee:F8VR31 Uniprot:F8VR31
Length = 807
Score = 155 (59.6 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 44/118 (37%), Positives = 65/118 (55%)
Query: 64 GSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSEE 123
G VS NV EAK V L K G +GII PY+ QLK + + E
Sbjct: 671 GGVS--NVTEAKLIVFLTSIFVKA----GCSPSDIGIIAPYRQQLKIINDLLARSIGMVE 724
Query: 124 GKDLYINTVDAFQGQERDVIIMSCVRASNHG-VG-FVADIRRMNVALTRARRALWVMG 179
+NTVD +QG+++ ++++S VR++ G VG + D RR+NVA+TRA+ L ++G
Sbjct: 725 -----VNTVDKYQGRDKSIVLVSFVRSNKDGTVGELLKDWRRLNVAITRAKHKLILLG 777
>ASPGD|ASPL0000069352 [details] [associations]
symbol:AN7246 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] InterPro:IPR000641 InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 PRINTS:PR00819 SMART:SM00382
GO:GO:0005524 EMBL:BN001304 eggNOG:COG0464 GO:GO:0017111
EMBL:AACD01000123 RefSeq:XP_680515.1 ProteinModelPortal:Q5AWT4
EnsemblFungi:CADANIAT00000198 GeneID:2870136 KEGG:ani:AN7246.2
HOGENOM:HOG000168598 OMA:LDNQFRL OrthoDB:EOG4CJZR5 Uniprot:Q5AWT4
Length = 2310
Score = 130 (50.8 bits), Expect = 8.1e-08, Sum P(3) = 8.1e-08
Identities = 30/91 (32%), Positives = 53/91 (58%)
Query: 125 KDLYINTVDAFQGQERDVIIMSCVRASNHG-VGFVADIRRMNVALTRARRALWVMGNAGA 183
+ + ++T+D +QG+E D++I + R++ G +GF++ +R+NV L+RAR L ++GN+
Sbjct: 958 RPIKLSTIDNYQGEESDIVIATLTRSNKDGDIGFMSAPQRLNVLLSRARDVLIMIGNSNT 1017
Query: 184 LTQS----DDWAALIADSKARNCYMDMDSLP 210
T S + W D N Y+ D LP
Sbjct: 1018 FTNSRKGKEVWKPFF-DQLQTNGYL-YDGLP 1046
Score = 83 (34.3 bits), Expect = 8.1e-08, Sum P(3) = 8.1e-08
Identities = 42/134 (31%), Positives = 56/134 (41%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVINL-P----DEVYYKDPVLRPYVFFDVIHG 57
L+ Q+RM P I R Y L ++ L P + V + D +P F +
Sbjct: 815 LAKQHRMAPEISALVRRLTYPDLLDGDKTKTRLAPRGLQNRVVFIDHS-QPEGFLHGVSD 873
Query: 58 RESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRN 117
R+ GG S QN E K L + K L G G + I+TPY QL L+ E R
Sbjct: 874 RDGD-GGKGSKQNTFEVK----LVLKIVKYLGQQGYGTDKLVILTPYLGQLHLLREELRK 928
Query: 118 ----VLNSEEGKDL 127
VLN + DL
Sbjct: 929 DTDPVLNDLDSYDL 942
Score = 42 (19.8 bits), Expect = 8.1e-08, Sum P(3) = 8.1e-08
Identities = 14/64 (21%), Positives = 29/64 (45%)
Query: 232 PHNARGLRSAGQRHRSFDMNMESRSGTPSEDDEKVSRNGNYRPFKPPLENSLDDFDQSGE 291
PH ++ +R +G + + + E+ PS + E+ N P +E +L +Q +
Sbjct: 1213 PHASK-VRKSGPATQGTN-SQETVRQEPSHEAEQAEPNRPPSANSPDVETALSSAEQDWK 1270
Query: 292 KYRD 295
+D
Sbjct: 1271 YQKD 1274
>POMBASE|SPBC16D10.04c [details] [associations]
symbol:dna2 "DNA replication endonuclease-helicase
Dna2" species:4896 "Schizosaccharomyces pombe" [GO:0000084 "S phase
of mitotic cell cycle" evidence=IC] [GO:0000723 "telomere
maintenance" evidence=IGI] [GO:0000784 "nuclear chromosome,
telomeric region" evidence=ISO] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=ISO] [GO:0004518 "nuclease activity"
evidence=IMP] [GO:0004527 "exonuclease activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IC;IDA]
[GO:0005657 "replication fork" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006281 "DNA repair" evidence=ISS] [GO:0017108
"5'-flap endonuclease activity" evidence=ISO] [GO:0019901 "protein
kinase binding" evidence=IPI] [GO:0031573 "intra-S DNA damage
checkpoint" evidence=IMP] [GO:0031860 "telomeric 3' overhang
formation" evidence=IMP] [GO:0042162 "telomeric DNA binding"
evidence=IDA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IMP] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0043596 "nuclear replication fork"
evidence=IC] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0071932 "replication fork reversal" evidence=IMP]
InterPro:IPR026851 PomBase:SPBC16D10.04c InterPro:IPR014808
Pfam:PF08696 GO:GO:0005829 GO:GO:0005524 GO:GO:0046872
EMBL:CU329671 GO:GO:0006281 GenomeReviews:CU329671_GR GO:GO:0051539
GO:GO:0043596 GO:GO:0004003 GO:GO:0004527 GO:GO:0000084
eggNOG:COG1112 GO:GO:0000784 GO:GO:0042162 GO:GO:0031573
GO:GO:0017108 GO:GO:0043137 GO:GO:0031860 GO:GO:0043142
PANTHER:PTHR10887:SF14 EMBL:AF144384 EMBL:AB028014 EMBL:AF075169
PIR:T39568 PIR:T47242 PIR:T51292 RefSeq:NP_596499.2 STRING:Q9URU2
GeneID:2540148 OrthoDB:EOG47H8Z4 NextBio:20801284 GO:GO:0071932
InterPro:IPR022765 Pfam:PF01930 Uniprot:Q9URU2
Length = 1397
Score = 157 (60.3 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 62/210 (29%), Positives = 102/210 (48%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN--------------LPDE---VYYKDPV 45
L +QYRM+ I S Y G L I+ LPD +++ + +
Sbjct: 1127 LRLQYRMNEDINSLSSELIYGGNLVCGSKTISQKKLILPKAHLSDGLPDSSSSLHWVNKL 1186
Query: 46 LRP---YVFF--DVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGI 100
+ P +FF D I G ES + +N EA F L E + G+ + ++GI
Sbjct: 1187 INPSHSVIFFNTDDILGVESKTNNIL--ENHTEA-F---LIEQAVSSFLERGVKQSSIGI 1240
Query: 101 ITPYKLQLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG-VG-FV 158
I+ YK Q++ L ++ E INTVD +QG+++D+I++S VR+++ VG +
Sbjct: 1241 ISIYKSQVELLSKNLKSFTEIE------INTVDRYQGRDKDIILISFVRSNSKNLVGELL 1294
Query: 159 ADIRRMNVALTRARRALWVMGNAGALTQSD 188
D R+NVAL+RA+ + G+ L+ S+
Sbjct: 1295 RDWHRLNVALSRAKVKCIMFGSLSTLSSSN 1324
>UNIPROTKB|Q5ZKG3 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9031 "Gallus gallus" [GO:0005524
"ATP binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0032508 "DNA
duplex unwinding" evidence=ISS] [GO:0000076 "DNA replication
checkpoint" evidence=ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISS] [GO:0006260 "DNA replication"
evidence=ISS] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0003678 "DNA helicase activity" evidence=ISS] [GO:0004518
"nuclease activity" evidence=ISS] [GO:0043139 "5'-3' DNA helicase
activity" evidence=ISS] [GO:0043142 "single-stranded DNA-dependent
ATPase activity" evidence=ISS] [GO:0017108 "5'-flap endonuclease
activity" evidence=ISS] [GO:0045740 "positive regulation of DNA
replication" evidence=ISS] [GO:0006264 "mitochondrial DNA
replication" evidence=ISS] [GO:0043137 "DNA replication, removal of
RNA primer" evidence=ISS] [GO:0006284 "base-excision repair"
evidence=ISS] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=ISS] [GO:0005760
"gamma DNA polymerase complex" evidence=ISS] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0006284 GO:GO:0003677
GO:GO:0051539 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0000729 GO:GO:0017108 GO:GO:0000076 GO:GO:0043137
GO:GO:0043139 GO:GO:0043142 GO:GO:0006264 PANTHER:PTHR10887:SF14
EMBL:AJ720121 EMBL:AADN02028013 IPI:IPI00596013
RefSeq:NP_001006497.1 UniGene:Gga.42409 STRING:Q5ZKG3 GeneID:423688
KEGG:gga:423688 CTD:1763 HOGENOM:HOG000168456 HOVERGEN:HBG081456
KO:K10742 NextBio:20826122 Uniprot:Q5ZKG3
Length = 992
Score = 142 (55.0 bits), Expect = 9.8e-08, Sum P(2) = 9.8e-08
Identities = 33/84 (39%), Positives = 56/84 (66%)
Query: 98 VGIITPYKLQLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASN-HGVG 156
+GII+PY+ QLK + + +E + + +NT+D +QG+++ +II+S VR SN +G
Sbjct: 872 IGIISPYRHQLKVITDLMARL---KENR-VEVNTIDKYQGRDKSIIIVSFVRNSNDENLG 927
Query: 157 -FVADIRRMNVALTRARRALWVMG 179
+ D RR+NVA+TRA+ L ++G
Sbjct: 928 ALLKDWRRLNVAITRAKHKLIMVG 951
Score = 59 (25.8 bits), Expect = 9.8e-08, Sum P(2) = 9.8e-08
Identities = 32/110 (29%), Positives = 46/110 (41%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLT-DSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
L+VQYRM+ I ++ Y+G+L SE V N + P L+ E
Sbjct: 792 LTVQYRMNSKIMSLSNKLVYEGKLECGSEKVSNATANL----PNLKMLKL-------EFA 840
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCL 111
+ V E VC T K+ G +GII+PY+ QLK +
Sbjct: 841 DASKTWLKEVLEPDKPVCFLN----TEKA-GCRPSDIGIISPYRHQLKVI 885
>DICTYBASE|DDB_G0274797 [details] [associations]
symbol:aqr "intron-binding protein aquarius homolog"
species:44689 "Dictyostelium discoideum" [GO:0097157 "pre-mRNA
intronic binding" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR024860 dictyBase:DDB_G0274797
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000012
GO:GO:0000398 eggNOG:COG1112 KO:K12874 OMA:RTKAVGH GO:GO:0097157
PANTHER:PTHR10887:SF5 RefSeq:XP_643918.1 ProteinModelPortal:Q555Z2
PRIDE:Q555Z2 EnsemblProtists:DDB0233439 GeneID:8619345
KEGG:ddi:DDB_G0274797 InParanoid:Q555Z2 ProtClustDB:CLSZ2431000
Uniprot:Q555Z2
Length = 1487
Score = 152 (58.6 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 36/116 (31%), Positives = 66/116 (56%)
Query: 68 YQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSEE---- 123
YQN+ EA++ V ++++L ++G + ++T Y Q L+ F+ ++
Sbjct: 1307 YQNLGEAEYIVAMFQYLI----AIGYPSEKITVLTTYNGQKNLLRDVFKAKCTPQDPKKT 1362
Query: 124 --GKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWV 177
G L I T+D +QGQ+ D+I++S VR +G + D+RR+ VA++RAR L++
Sbjct: 1363 QYGLPLKITTIDKYQGQQNDIILLSLVRTKQYG--HIRDVRRLIVAMSRARLGLYI 1416
>UNIPROTKB|I3LBB7 [details] [associations]
symbol:I3LBB7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IEA] InterPro:IPR026851 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 EMBL:CU468421
Ensembl:ENSSSCT00000030264 OMA:STCHITH Uniprot:I3LBB7
Length = 249
Score = 138 (53.6 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 53/177 (29%), Positives = 86/177 (48%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRL---TD--SESVINLPD--EV-----YYKD----PVL 46
L+VQYRM+ I ++ Y+G+L +D + +V+NLP +V +Y D P +
Sbjct: 80 LTVQYRMNSKIMSLSNKLTYEGKLECGSDKVASAVVNLPKLKDVKLELEFYADYSENPWM 139
Query: 47 -------RPYVFF--DVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT 97
P F D + E G VS N+ EAK V +L G
Sbjct: 140 VGAFEPNNPVCFLNTDKVPAPEQVEKGGVS--NITEAKLVV----YLTSIFVKAGCNPCN 193
Query: 98 VGIITPYKLQLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG 154
+GII PY+ QLK + ++L+ + +NTVD +QG+++ +I++S VR++ G
Sbjct: 194 IGIIAPYRQQLKVIN----DLLSHSSVGMVEVNTVDKYQGRDKSIILVSFVRSNRDG 246
>ASPGD|ASPL0000064563 [details] [associations]
symbol:AN7014 species:162425 "Emericella nidulans"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0097157
"pre-mRNA intronic binding" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 GO:GO:0005681 EMBL:BN001304
GO:GO:0004386 GO:GO:0000398 HOGENOM:HOG000170551 GO:GO:0097157
PANTHER:PTHR10887:SF5 ProteinModelPortal:C8VC84
EnsemblFungi:CADANIAT00000462 OMA:TIYENEM Uniprot:C8VC84
Length = 1422
Score = 149 (57.5 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 35/113 (30%), Positives = 63/113 (55%)
Query: 69 QNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQH--EFRNVLNSEEGKD 126
QN+ EA++ V +++++ + +G + I+ Y Q ++ R N+ G
Sbjct: 1203 QNLGEAEYAVAIFQYM----RLLGYPASKISILATYAGQTALIKDVLNHRCSKNTLFGMP 1258
Query: 127 LYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMG 179
+ TVD +QG++ D II+S R VG++ D+RR+ VAL+RAR L+++G
Sbjct: 1259 KIVTTVDRYQGEQNDYIILSLTRTRT--VGYLRDVRRLTVALSRARLGLYILG 1309
>RGD|1306223 [details] [associations]
symbol:Aqr "aquarius homolog (mouse)" species:10116 "Rattus
norvegicus" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=ISO]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
InterPro:IPR024860 InterPro:IPR026300 PIRSF:PIRSF038901 RGD:1306223
GO:GO:0005681 GO:GO:0000398 GO:GO:0097157 PANTHER:PTHR10887:SF5
IPI:IPI00389267 ProteinModelPortal:D3ZZP0
Ensembl:ENSRNOT00000011917 UCSC:RGD:1306223 ArrayExpress:D3ZZP0
Uniprot:D3ZZP0
Length = 1353
Score = 147 (56.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 45/151 (29%), Positives = 75/151 (49%)
Query: 68 YQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSEEGKDL 127
YQN+ EA++ V L+ ++ L +G + I+T Y Q +H R+++N G +
Sbjct: 1198 YQNLGEAEYVVALFMYM--CL--LGYPADKISILTTYNGQ----KHLIRDIINRRCGNNP 1249
Query: 128 YIN------TVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNA 181
I TVD FQGQ+ D I++S VR VG + D+RR+ VA++RAR L++
Sbjct: 1250 LIGRPNKVTTVDRFQGQQNDYILLSLVRT--RAVGHLRDVRRLVVAMSRARLGLYIFARV 1307
Query: 182 GALTQSDDWAALIADSKARNCYMDMDSLPKE 212
+ + AR ++ + +P E
Sbjct: 1308 SLFQNCFELTPAFSQLTARPLHLHI--IPTE 1336
>UNIPROTKB|F1MUW2 [details] [associations]
symbol:F1MUW2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 GO:GO:0000398 OMA:RTKAVGH
GO:GO:0071013 GO:GO:0097157 PANTHER:PTHR10887:SF5
GeneTree:ENSGT00700000104467 EMBL:DAAA02028420 EMBL:DAAA02028416
EMBL:DAAA02028417 EMBL:DAAA02028418 EMBL:DAAA02028419
IPI:IPI00852511 Ensembl:ENSBTAT00000016895 Uniprot:F1MUW2
Length = 1466
Score = 147 (56.8 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 45/151 (29%), Positives = 75/151 (49%)
Query: 68 YQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSEEGKDL 127
YQN+ EA++ V L+ ++ L +G + I+T Y Q +H R+++N G +
Sbjct: 1180 YQNLGEAEYVVALFMYM--CL--LGYPADKISILTTYNGQ----KHLIRDIINRRCGSNP 1231
Query: 128 YIN------TVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNA 181
I TVD FQGQ+ D I++S VR VG + D+RR+ VA++RAR L++
Sbjct: 1232 LIGRPNKVTTVDRFQGQQNDYILLSLVRT--RAVGHLRDVRRLVVAMSRARLGLYIFARV 1289
Query: 182 GALTQSDDWAALIADSKARNCYMDMDSLPKE 212
+ + AR ++ + +P E
Sbjct: 1290 SLFQNCFELTPAFSQLTARPLHLHI--IPTE 1318
>MGI|MGI:1276102 [details] [associations]
symbol:Aqr "aquarius" species:10090 "Mus musculus"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0097157 "pre-mRNA
intronic binding" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 MGI:MGI:1276102 GO:GO:0000398
CTD:9716 eggNOG:COG1112 HOGENOM:HOG000170551 HOVERGEN:HBG080430
KO:K12874 OMA:RTKAVGH OrthoDB:EOG4ZPDTF GO:GO:0071013 GO:GO:0097157
PANTHER:PTHR10887:SF5 EMBL:AK122310 EMBL:AK145547 EMBL:AK151716
EMBL:BC042479 EMBL:U90333 IPI:IPI00330263 RefSeq:NP_033832.2
UniGene:Mm.2545 ProteinModelPortal:Q8CFQ3 SMR:Q8CFQ3
PhosphoSite:Q8CFQ3 PaxDb:Q8CFQ3 PRIDE:Q8CFQ3
Ensembl:ENSMUST00000043160 GeneID:11834 KEGG:mmu:11834
GeneTree:ENSGT00700000104467 InParanoid:Q8CFQ3 NextBio:279759
Bgee:Q8CFQ3 CleanEx:MM_AQR Genevestigator:Q8CFQ3
GermOnline:ENSMUSG00000040383 Uniprot:Q8CFQ3
Length = 1481
Score = 147 (56.8 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 45/151 (29%), Positives = 75/151 (49%)
Query: 68 YQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSEEGKDL 127
YQN+ EA++ V L+ ++ L +G + I+T Y Q +H R+++N G +
Sbjct: 1202 YQNLGEAEYVVALFMYM--CL--LGYPADKISILTTYNGQ----KHLIRDIINRRCGNNP 1253
Query: 128 YIN------TVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNA 181
I TVD FQGQ+ D I++S VR VG + D+RR+ VA++RAR L++
Sbjct: 1254 LIGRPNKVTTVDRFQGQQNDYILLSLVRT--RAVGHLRDVRRLVVAMSRARLGLYIFARV 1311
Query: 182 GALTQSDDWAALIADSKARNCYMDMDSLPKE 212
+ + AR ++ + +P E
Sbjct: 1312 SLFQNCFELTPAFSQLTARPLHLHI--IPTE 1340
>UNIPROTKB|F1PA16 [details] [associations]
symbol:AQR "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR024860 InterPro:IPR026300 PIRSF:PIRSF038901
GO:GO:0000398 OMA:RTKAVGH GO:GO:0071013 GO:GO:0097157
PANTHER:PTHR10887:SF5 GeneTree:ENSGT00700000104467
EMBL:AAEX03016041 Ensembl:ENSCAFT00000013319 Uniprot:F1PA16
Length = 1483
Score = 147 (56.8 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 45/151 (29%), Positives = 75/151 (49%)
Query: 68 YQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSEEGKDL 127
YQN+ EA++ V L+ ++ L +G + I+T Y Q +H R+++N G +
Sbjct: 1197 YQNLGEAEYVVALFMYM--CL--LGYPADKISILTTYNGQ----KHLIRDIINRRCGSNP 1248
Query: 128 YIN------TVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNA 181
I TVD FQGQ+ D I++S VR VG + D+RR+ VA++RAR L++
Sbjct: 1249 LIGRPNKVTTVDRFQGQQNDYILLSLVRT--RAVGHLRDVRRLVVAMSRARLGLYIFARV 1306
Query: 182 GALTQSDDWAALIADSKARNCYMDMDSLPKE 212
+ + AR ++ + +P E
Sbjct: 1307 SLFQNCFELTPAFSQLTARPLHLHI--IPTE 1335
>UNIPROTKB|O60306 [details] [associations]
symbol:AQR "Intron-binding protein aquarius" species:9606
"Homo sapiens" [GO:0097157 "pre-mRNA intronic binding"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR024860 InterPro:IPR026300
PIRSF:PIRSF038901 GO:GO:0000398 EMBL:AB011132 EMBL:EF553519
EMBL:BC036913 EMBL:BC070379 EMBL:BC108262 EMBL:BC127111
EMBL:BC127112 IPI:IPI00796835 PIR:T00333 RefSeq:NP_055506.1
UniGene:Hs.510958 ProteinModelPortal:O60306 SMR:O60306
IntAct:O60306 STRING:O60306 PhosphoSite:O60306 PaxDb:O60306
PRIDE:O60306 Ensembl:ENST00000156471 GeneID:9716 KEGG:hsa:9716
UCSC:uc001ziv.3 CTD:9716 GeneCards:GC15M035147 HGNC:HGNC:29513
MIM:610548 neXtProt:NX_O60306 PharmGKB:PA134869224 eggNOG:COG1112
HOGENOM:HOG000170551 HOVERGEN:HBG080430 InParanoid:O60306 KO:K12874
OMA:RTKAVGH OrthoDB:EOG4ZPDTF ChiTaRS:AQR GenomeRNAi:9716
NextBio:36525 Bgee:O60306 CleanEx:HS_AQR Genevestigator:O60306
GermOnline:ENSG00000021776 GO:GO:0071013 GO:GO:0097157
PANTHER:PTHR10887:SF5 Uniprot:O60306
Length = 1485
Score = 147 (56.8 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 45/151 (29%), Positives = 75/151 (49%)
Query: 68 YQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSEEGKDL 127
YQN+ EA++ V L+ ++ L +G + I+T Y Q +H R+++N G +
Sbjct: 1198 YQNLGEAEYVVALFMYM--CL--LGYPADKISILTTYNGQ----KHLIRDIINRRCGNNP 1249
Query: 128 YIN------TVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVMGNA 181
I TVD FQGQ+ D I++S VR VG + D+RR+ VA++RAR L++
Sbjct: 1250 LIGRPNKVTTVDRFQGQQNDYILLSLVRT--RAVGHLRDVRRLVVAMSRARLGLYIFARV 1307
Query: 182 GALTQSDDWAALIADSKARNCYMDMDSLPKE 212
+ + AR ++ + +P E
Sbjct: 1308 SLFQNCFELTPAFSQLTARPLHLHI--IPTE 1336
>WB|WBGene00001016 [details] [associations]
symbol:dna-2 species:6239 "Caenorhabditis elegans"
[GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA;IDA] [GO:0017108 "5'-flap endonuclease activity"
evidence=IEA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IDA] [GO:0000014 "single-stranded DNA specific
endodeoxyribonuclease activity" evidence=IDA] [GO:0006259 "DNA
metabolic process" evidence=IDA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005634 GO:GO:0009792
eggNOG:COG1112 GO:GO:0017108 GO:GO:0000014 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
GeneTree:ENSGT00550000074852 OMA:EHESLCH GO:GO:0043141 EMBL:Z50070
PIR:T22132 RefSeq:NP_496515.1 ProteinModelPortal:Q20371 SMR:Q20371
STRING:Q20371 PaxDb:Q20371 PRIDE:Q20371 EnsemblMetazoa:F43G6.1a
GeneID:174809 KEGG:cel:CELE_F43G6.1 UCSC:F43G6.1a CTD:174809
WormBase:F43G6.1a HOGENOM:HOG000016745 InParanoid:Q20371
NextBio:885596 ArrayExpress:Q20371 Uniprot:Q20371
Length = 1105
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 66/203 (32%), Positives = 99/203 (48%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLT-DSESVINLP-----DEVYYKDP------------ 44
L+ QYRM+ I S+ FY+ RL +ESV D + D
Sbjct: 888 LTSQYRMNREISVLSSKLFYENRLICGNESVSRSSLDRTGDYIVAMDDGSDHIRKALSGD 947
Query: 45 VLRPYVFFDV---IHGR---ESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTV 98
+ VF D I+ + E GG + N EAK + E Q+ + S G+ +
Sbjct: 948 IKDSCVFLDTQSTINSKMQCEDGEGGGMC--NDGEAKL---ISELCQQFVMS-GVKPHEI 1001
Query: 99 GIITPYKLQLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVG-- 156
G+++ Y+ Q+ H R +LNS+E L +NT+D++QG+E+ VII S +N
Sbjct: 1002 GVMSAYRRQV---DH-IRGILNSDE---LEVNTIDSYQGREKRVIIWSLTWTNNSTKKSE 1054
Query: 157 FVADIRRMNVALTRARRALWVMG 179
+ D RR+NVALTRAR+ L V+G
Sbjct: 1055 LLKDERRVNVALTRARQKLVVVG 1077
>WB|WBGene00019529 [details] [associations]
symbol:K08D10.5 species:6239 "Caenorhabditis elegans"
[GO:0004386 "helicase activity" evidence=IEA] eggNOG:COG1112
EMBL:FO081596 GeneTree:ENSGT00530000065249 PIR:T29386
RefSeq:NP_500503.1 UniGene:Cel.27256 ProteinModelPortal:Q21321
SMR:Q21321 PaxDb:Q21321 EnsemblMetazoa:K08D10.5 GeneID:187150
KEGG:cel:CELE_K08D10.5 UCSC:K08D10.5 CTD:187150 WormBase:K08D10.5
InParanoid:Q21321 OMA:KEINIFR NextBio:934280 Uniprot:Q21321
Length = 602
Score = 140 (54.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 57/216 (26%), Positives = 100/216 (46%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVIN-LPDEVYYKDPVLRPYVFFDVIHGRE 59
M L+ +R I D FY LT + +N +P + P P+VF + I ++
Sbjct: 385 MHLTRVHRCPKMITDLLGAVFYGNTLTSTRKAVNRVPILEAMELPSHHPFVFVNYI-SQQ 443
Query: 60 SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVL 119
+ G S S +N EA++ + L L++ + V+V ++ Y Q + ++
Sbjct: 444 TQVGKSFSNEN--EARYALQLVTALKRHAREQNT-TVSVAVLNFYGAQYSYVY----SI- 495
Query: 120 NSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVG-FVADIRRMNVALTRARRALWVM 178
+E+G + +NT+D QGQE DV I+ R+ + F+ + R+NVAL+R++ A V+
Sbjct: 496 -AEDG--VRVNTIDGCQGQEYDVSIVLLTRSDPYEKSKFLVNPNRINVALSRSKMATVVI 552
Query: 179 GNAGALTQSDDWAALIADSKARNCYMD--MDSLPKE 212
G + + R+C +D LP E
Sbjct: 553 GQRHLIGNHPNVQQAKRGRYQRSCNWSRLLDKLPAE 588
>FB|FBgn0030170 [details] [associations]
symbol:CG2990 species:7227 "Drosophila melanogaster"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0000014 "single-stranded DNA specific endodeoxyribonuclease
activity" evidence=ISS] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] [GO:0043142 "single-stranded
DNA-dependent ATPase activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 EMBL:AE014298 GO:GO:0006200
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
KO:K10742 GeneTree:ENSGT00550000074852 OMA:EHESLCH
FlyBase:FBgn0030170 EMBL:BT088860 RefSeq:NP_727386.1
UniGene:Dm.17561 SMR:Q8IRL9 STRING:Q8IRL9
EnsemblMetazoa:FBtr0071415 GeneID:31934 KEGG:dme:Dmel_CG2990
UCSC:CG2990-RB InParanoid:Q8IRL9 GenomeRNAi:31934 NextBio:776017
Uniprot:Q8IRL9
Length = 1100
Score = 143 (55.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 47/154 (30%), Positives = 75/154 (48%)
Query: 68 YQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSEEGKDL 127
Y N EA G+ + HL + L G +G+I PY+ Q++ F+ L S+ DL
Sbjct: 942 YTNYCEA--GIVM--HLLRYLLKSGYEASRIGVIAPYRAQVEL----FKK-LASKLDTDL 992
Query: 128 YINTVDAFQGQERDVIIMSCVRAS--------NHGVGFVADIRRMNVALTRARRALWVMG 179
NTVD FQG+++++II SC + + + D RR+ VA+TRA+ L ++G
Sbjct: 993 ECNTVDQFQGRDKNLIIYSCSKTGGDFSDMERSREAEILEDQRRLTVAITRAKNKLILLG 1052
Query: 180 NAGALTQSDDWAALIADSKARNCYMDMDSLPKEF 213
+ L Q + L R C + ++ EF
Sbjct: 1053 DIKCLEQYGPFRQLFKHIPDR-CRLKLEEGRMEF 1085
Score = 39 (18.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRL 26
+LS+QYRM+ I + Y G L
Sbjct: 830 VLSLQYRMNKTITRLANELTYGGDL 854
>UNIPROTKB|F1NPB8 [details] [associations]
symbol:AQR "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 GO:GO:0000398 OMA:RTKAVGH
GO:GO:0071013 GO:GO:0097157 PANTHER:PTHR10887:SF5
GeneTree:ENSGT00700000104467 EMBL:AADN02003289 EMBL:AADN02003288
IPI:IPI00597734 Ensembl:ENSGALT00000015995 Uniprot:F1NPB8
Length = 1416
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 45/152 (29%), Positives = 75/152 (49%)
Query: 68 YQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSEEGKDL 127
YQN+ EA++ V ++ ++ L +G + I+T Y Q +H R+V+N G +
Sbjct: 1207 YQNLGEAEYVVAVFMYM--CL--LGYPADRISILTTYNGQ----KHLIRDVINQRCGNNP 1258
Query: 128 YIN------TVDAFQGQERDVIIMSCVRASNHGVGFVA-DIRRMNVALTRARRALWVMGN 180
I TVD FQGQ+ D I++S VR VG + D+RR+ VA++RAR L++
Sbjct: 1259 LIGRPNKVTTVDRFQGQQNDYILLSLVRTK--AVGHLRRDVRRLVVAMSRARLGLYIFAR 1316
Query: 181 AGALTQSDDWAALIADSKARNCYMDMDSLPKE 212
+ + AR ++ + +P E
Sbjct: 1317 VSLFQNCFELTPAFSQLTARPLHLHI--IPTE 1346
>SGD|S000001207 [details] [associations]
symbol:DNA2 "Tripartite DNA replication factor" species:4932
"Saccharomyces cerevisiae" [GO:0001302 "replicative cell aging"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0000784
"nuclear chromosome, telomeric region" evidence=IDA] [GO:0000723
"telomere maintenance" evidence=IMP] [GO:0006261 "DNA-dependent DNA
replication" evidence=IMP;IDA] [GO:0006273 "lagging strand
elongation" evidence=IGI;IMP] [GO:0006281 "DNA repair"
evidence=IEA;IGI;IMP] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IDA] [GO:0000014 "single-stranded DNA specific
endodeoxyribonuclease activity" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0017108 "5'-flap endonuclease activity"
evidence=IEA;IDA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0043142 "single-stranded
DNA-dependent ATPase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0000733 "DNA strand renaturation" evidence=IDA]
[GO:0000706 "meiotic DNA double-strand break processing"
evidence=IGI] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR026851
SGD:S000001207 InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 GO:GO:0003677 EMBL:BK006934
GO:GO:0001302 GO:GO:0051539 GO:GO:0004003 eggNOG:COG1112
GO:GO:0000784 EMBL:U00027 GO:GO:0000723 GO:GO:0000706 GO:GO:0000733
GO:GO:0017108 GO:GO:0000014 GO:GO:0043139 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
GeneTree:ENSGT00550000074852 OrthoDB:EOG47H8Z4 PIR:S48904
RefSeq:NP_012034.1 ProteinModelPortal:P38859 SMR:P38859
DIP:DIP-2324N IntAct:P38859 MINT:MINT-620090 STRING:P38859
EnsemblFungi:YHR164C GeneID:856569 KEGG:sce:YHR164C CYGD:YHR164c
HOGENOM:HOG000112234 OMA:GLARYNI NextBio:982411
Genevestigator:P38859 GermOnline:YHR164C GO:GO:0035861
GO:GO:0006273 Uniprot:P38859
Length = 1522
Score = 137 (53.3 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 45/143 (31%), Positives = 76/143 (53%)
Query: 98 VGIITPYKLQLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASN--HGV 155
+G++T Y+ QL+ L+ F N +G L I T D FQG+++ II+S VR ++ +G
Sbjct: 1361 IGVMTLYRAQLRLLKKIFNK--NVYDG--LEILTADQFQGRDKKCIIISMVRRNSQLNGG 1416
Query: 156 GFVADIRRMNVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDM--DSLPK-E 212
+ ++RR+NVA+TRA+ L ++G+ + + + + + RN M D+L K +
Sbjct: 1417 ALLKELRRVNVAMTRAKSKLIIIGSKSTIGSVPEIKSFVNLLEERNWVYTMCKDALYKYK 1476
Query: 213 F---SVALAAKAPGYGPLQGKIP 232
F S A+ G G G P
Sbjct: 1477 FPDRSNAIDEARKGCGKRTGAKP 1499
>CGD|CAL0002159 [details] [associations]
symbol:DNA2 species:5476 "Candida albicans" [GO:0000784
"nuclear chromosome, telomeric region" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0031860 "telomeric 3' overhang
formation" evidence=IEA] [GO:0000733 "DNA strand renaturation"
evidence=IEA] [GO:0000706 "meiotic DNA double-strand break
processing" evidence=IEA] [GO:0001302 "replicative cell aging"
evidence=IEA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IEA] [GO:0042162 "telomeric DNA binding" evidence=IEA]
[GO:0017108 "5'-flap endonuclease activity" evidence=IEA]
[GO:0000014 "single-stranded DNA specific endodeoxyribonuclease
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] InterPro:IPR026851 InterPro:IPR014808
CGD:CAL0002159 Pfam:PF08696 eggNOG:COG1112 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
InterPro:IPR022765 Pfam:PF01930 EMBL:AACQ01000161 EMBL:AACQ01000157
RefSeq:XP_712310.1 RefSeq:XP_712454.1 ProteinModelPortal:Q59RL2
STRING:Q59RL2 GeneID:3645932 GeneID:3646072 KEGG:cal:CaO19.1192
KEGG:cal:CaO19.8783 Uniprot:Q59RL2
Length = 1426
Score = 136 (52.9 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 43/149 (28%), Positives = 78/149 (52%)
Query: 42 KDPVLRPYVFFDVIHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGII 101
K+ VL ++ +D + E + G V N EA L + + L G+ + +G++
Sbjct: 1229 KNNVL--FLDYDAVPAVEENVGEMVI--NTKEA----LLIQQIVNALVHGGVKEDEIGVM 1280
Query: 102 TPYKLQLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHGVG--FVA 159
+ Y+ QL L+ N+ KDL I T D +QG++++ II+S VR++ +
Sbjct: 1281 SFYRAQLSVLKKNLNNL------KDLEILTADQYQGRDKECIIISLVRSNERKFAGDLMK 1334
Query: 160 DIRRMNVALTRARRALWVMGNAGALTQSD 188
+ RR+NVA TRA+ L ++G+ L+ ++
Sbjct: 1335 EYRRLNVATTRAKTKLIILGSRFTLSTNE 1363
>UNIPROTKB|F1RMM8 [details] [associations]
symbol:LOC100519780 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0045944 "positive regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001900 InterPro:IPR003593
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS50103 SMART:SM00382
SMART:SM00955 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0004540 InterPro:IPR022966 PROSITE:PS01175
OMA:FRAAHIM PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:FP102633 Ensembl:ENSSSCT00000003670 Uniprot:F1RMM8
Length = 2879
Score = 138 (53.6 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 59/210 (28%), Positives = 91/210 (43%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEV--YYKDPVLRPYVFFDVIHGRE 59
+L +QY +H I FPS FY+ +L + + LP + Y K+ +F DV E
Sbjct: 2652 MLDLQYCVHESICAFPSMEFYKKKLKTWQG-LRLPPSILGYGKENC--SVIFGDVQSPEE 2708
Query: 60 S-----HRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQL----KC 110
S G S N ++A VCL K L S + + I+TPY Q+ K
Sbjct: 2709 SLVVSTEEGRENSKVNKEQAALVVCL----AKQLVSGRVDPKDMAILTPYHAQVLEISKR 2764
Query: 111 LQH-EFRNV----LNSEEGKDL-YINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRM 164
L+ V + +G+ Y+ QE D+ + +GF+ D ++
Sbjct: 2765 LEEARVAGVTVCSITKSQGRQWRYVLVSTVRTCQESDLDLRPTKSWLQKSLGFLVDPNQV 2824
Query: 165 NVALTRARRALWVMGNAGALTQSDDWAALI 194
NVALTRA+ LWV+G+ L W+ +
Sbjct: 2825 NVALTRAQEGLWVVGDRLLLRCCPLWSRFL 2854
>RGD|1306056 [details] [associations]
symbol:Pric285 "peroxisomal proliferator-activated receptor A
interacting complex 285" species:10116 "Rattus norvegicus"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0004540 "ribonuclease activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR026855
Pfam:PF00773 SMART:SM00382 SMART:SM00955 RGD:1306056 GO:GO:0005524
GO:GO:0003723 GO:GO:0004386 GO:GO:0004540 PANTHER:PTHR10887:SF16
GeneTree:ENSGT00550000074391 IPI:IPI00567928 RefSeq:XP_001057758.2
RefSeq:XP_230961.5 UniGene:Rn.47450 ProteinModelPortal:D4ADC2
Ensembl:ENSRNOT00000017787 GeneID:296474 KEGG:rno:296474
UCSC:RGD:1306056 CTD:296474 OrthoDB:EOG4Q84WM NextBio:641262
ArrayExpress:D4ADC2 Uniprot:D4ADC2
Length = 2944
Score = 138 (53.6 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 61/240 (25%), Positives = 102/240 (42%)
Query: 1 MLLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRE- 59
++L QYRMH I FPS FY G+L + P + + P V F + G E
Sbjct: 2714 IMLDTQYRMHKDICSFPSMEFYGGKLKTWSDLKRPPSLLGHVGKQSCP-VIFGSVQGYEQ 2772
Query: 60 -----SHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHE 114
+ G S N +E V + + L TL + V ++TPY Q +
Sbjct: 2773 KLLVSTEEGNENSRANPEEVTEVVRIIKQL--TLDRT-VDPKDVAVLTPYNAQAAAIS-- 2827
Query: 115 FRNVLNSEEG-KDLYINTVDAFQGQERDVIIMSCVRASNHG--------------VGFVA 159
R ++ + G + + ++ QG E +I+S VR +GFV
Sbjct: 2828 -RGLM--QRGVTGVTVTSITKSQGSEWRYVIVSTVRTCPRSDMDQRPTKSWLKKFLGFVV 2884
Query: 160 DIRRMNVALTRARRALWVMGNAGALTQSDDWAALIADSKARNCYMDMDSLPKEFSVALAA 219
D ++NVA+TRA+ L ++G+ L W L+ +A+N + + + + AL++
Sbjct: 2885 DPHQVNVAITRAQEGLCIIGDHLLLRCCPLWHRLLGFCEAQNSLVPAERVRVQRKSALSS 2944
>TAIR|locus:2064158 [details] [associations]
symbol:EMB2765 "EMBRYO DEFECTIVE 2765" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR024860 InterPro:IPR026300 PIRSF:PIRSF038901
GO:GO:0005886 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005681 GO:GO:0000398 eggNOG:COG1112 HOGENOM:HOG000170551
KO:K12874 OMA:RTKAVGH GO:GO:0097157 PANTHER:PTHR10887:SF5
EMBL:AY099864 IPI:IPI00544394 RefSeq:NP_850297.1 UniGene:At.23967
ProteinModelPortal:Q8L5Y4 SMR:Q8L5Y4 STRING:Q8L5Y4 PaxDb:Q8L5Y4
PRIDE:Q8L5Y4 EnsemblPlants:AT2G38770.1 GeneID:818459
KEGG:ath:AT2G38770 TAIR:At2g38770 InParanoid:Q8L5Y4
PhylomeDB:Q8L5Y4 ProtClustDB:CLSN2680117 Genevestigator:Q8L5Y4
Uniprot:Q8L5Y4
Length = 1509
Score = 135 (52.6 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 42/116 (36%), Positives = 63/116 (54%)
Query: 68 YQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSE----- 122
YQN EA++ V +Y ++ + +G + I+T Y Q K L R+V+N
Sbjct: 1259 YQNQGEAEYIVSVYIYM----RLLGYPANKISILTTYNGQ-KLL---IRDVINRRCVPYP 1310
Query: 123 -EGKDLYINTVDAFQGQERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWV 177
G + TVD FQGQ+ D I++S VR VG + D+RR+ VA++RAR L+V
Sbjct: 1311 FIGPPSKVTTVDKFQGQQNDFILLSLVRT--RFVGHLRDVRRLVVAMSRARLGLYV 1364
>UNIPROTKB|Q81NI5 [details] [associations]
symbol:BAS2982 "Conserved domain protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR RefSeq:NP_845517.1 RefSeq:YP_019848.1
RefSeq:YP_029239.1 ProteinModelPortal:Q81NI5 IntAct:Q81NI5
DNASU:1087476 EnsemblBacteria:EBBACT00000012886
EnsemblBacteria:EBBACT00000015522 EnsemblBacteria:EBBACT00000022854
GeneID:1087476 GeneID:2817117 GeneID:2850799 KEGG:ban:BA_3207
KEGG:bar:GBAA_3207 KEGG:bat:BAS2982 HOGENOM:HOG000093512
OMA:EVSMAYV ProtClustDB:CLSK916959
BioCyc:BANT260799:GJAJ-3044-MONOMER
BioCyc:BANT261594:GJ7F-3148-MONOMER Uniprot:Q81NI5
Length = 759
Score = 131 (51.2 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 51/179 (28%), Positives = 79/179 (44%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L Q RMH I F + Y+ R+ D SV + + V FD S
Sbjct: 410 MLQEQRRMHADISKFTNSFIYKNRVYDHPSVSERKELAQLQPFANEASVLFDT-----SQ 464
Query: 62 RGGSVSYQNVDEAKFGVCL-YEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
G ++F + +Q L + G ++GI+TPY+ Q + L R +L
Sbjct: 465 MGAFSLKDAASGSRFNIMSGLVAMQMMLIGLLDGVQSIGIVTPYRAQSRFLSTCIREMLQ 524
Query: 121 SEEGKDLYI--NTVDAFQGQERDVIIMSCVRA---SNHGVGFV--ADIRRMNVALTRAR 172
+ +++ + TV FQG ERD++I V + GV F + R +NVA+TRAR
Sbjct: 525 RTKYQNIPVLAATVHKFQGSERDMMIFDTVDSYPQERPGVLFFDHKNHRLVNVAVTRAR 583
>TIGR_CMR|BA_3207 [details] [associations]
symbol:BA_3207 "conserved domain protein" species:198094
"Bacillus anthracis str. Ames" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
RefSeq:NP_845517.1 RefSeq:YP_019848.1 RefSeq:YP_029239.1
ProteinModelPortal:Q81NI5 IntAct:Q81NI5 DNASU:1087476
EnsemblBacteria:EBBACT00000012886 EnsemblBacteria:EBBACT00000015522
EnsemblBacteria:EBBACT00000022854 GeneID:1087476 GeneID:2817117
GeneID:2850799 KEGG:ban:BA_3207 KEGG:bar:GBAA_3207 KEGG:bat:BAS2982
HOGENOM:HOG000093512 OMA:EVSMAYV ProtClustDB:CLSK916959
BioCyc:BANT260799:GJAJ-3044-MONOMER
BioCyc:BANT261594:GJ7F-3148-MONOMER Uniprot:Q81NI5
Length = 759
Score = 131 (51.2 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 51/179 (28%), Positives = 79/179 (44%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L Q RMH I F + Y+ R+ D SV + + V FD S
Sbjct: 410 MLQEQRRMHADISKFTNSFIYKNRVYDHPSVSERKELAQLQPFANEASVLFDT-----SQ 464
Query: 62 RGGSVSYQNVDEAKFGVCL-YEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLN 120
G ++F + +Q L + G ++GI+TPY+ Q + L R +L
Sbjct: 465 MGAFSLKDAASGSRFNIMSGLVAMQMMLIGLLDGVQSIGIVTPYRAQSRFLSTCIREMLQ 524
Query: 121 SEEGKDLYI--NTVDAFQGQERDVIIMSCVRA---SNHGVGFV--ADIRRMNVALTRAR 172
+ +++ + TV FQG ERD++I V + GV F + R +NVA+TRAR
Sbjct: 525 RTKYQNIPVLAATVHKFQGSERDMMIFDTVDSYPQERPGVLFFDHKNHRLVNVAVTRAR 583
>UNIPROTKB|Q9BYK8 [details] [associations]
symbol:HELZ2 "Helicase with zinc finger domain 2"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0030374 "ligand-dependent
nuclear receptor transcription coactivator activity" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0044255 "cellular lipid
metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR015880
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS00028 PROSITE:PS50157
SMART:SM00355 SMART:SM00382 SMART:SM00955 GO:GO:0005524
Reactome:REACT_111045 GO:GO:0005654 GO:GO:0044281 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0044255
GO:GO:0006351 GO:GO:0003723 GO:GO:0004386 GO:GO:0004540
GO:GO:0030374 eggNOG:COG0557 InterPro:IPR022966 EMBL:AL121829
EMBL:AF517673 EMBL:AB201715 EMBL:AB051556 EMBL:AK074171
EMBL:AK055611 IPI:IPI00249304 IPI:IPI00249305 IPI:IPI00736631
RefSeq:NP_001032412.2 RefSeq:NP_208384.3 UniGene:Hs.517180
ProteinModelPortal:Q9BYK8 IntAct:Q9BYK8 STRING:Q9BYK8
PhosphoSite:Q9BYK8 DMDM:209572784 PaxDb:Q9BYK8 PRIDE:Q9BYK8
GeneID:85441 KEGG:hsa:85441 UCSC:uc002yfl.1 UCSC:uc002yfm.2
CTD:85441 GeneCards:GC20M062189 HGNC:HGNC:30021 HPA:HPA051267
MIM:611265 neXtProt:NX_Q9BYK8 HOGENOM:HOG000231856
HOVERGEN:HBG080465 InParanoid:Q9BYK8 OMA:FRAAHIM PhylomeDB:Q9BYK8
GenomeRNAi:85441 NextBio:76020 ArrayExpress:Q9BYK8 Bgee:Q9BYK8
Genevestigator:Q9BYK8 GermOnline:ENSG00000130589
PANTHER:PTHR10887:SF16 Uniprot:Q9BYK8
Length = 2649
Score = 132 (51.5 bits), Expect = 0.00010, P = 0.00010
Identities = 53/211 (25%), Positives = 89/211 (42%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L QYRMH I FPS FY+ +L + + P + + P V F + G E
Sbjct: 2420 MLDTQYRMHEGICAFPSVAFYKSKLKTWQGLRRPPSVLGHAGKESCP-VIFGHVQGHERS 2478
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT----VGIITPYKLQLKCLQHEFRN 117
S N + +K + + + K + LG+ + ++TPY Q E
Sbjct: 2479 LLVSTDEGN-ENSKANLEEVAEVVRITKQLTLGRTVEPQDIAVLTPYNAQAS----EISK 2533
Query: 118 VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG--------------VGFVADIRR 163
L E + ++++ QG E +++S VR +GFV D +
Sbjct: 2534 ALRREGIAGVAVSSITKSQGSEWRYVLVSTVRTCAKSDLDQRPTKSWLKKFLGFVVDPNQ 2593
Query: 164 MNVALTRARRALWVMGNAGALTQSDDWAALI 194
+NVA+TRA+ L ++G+ L W +L+
Sbjct: 2594 VNVAVTRAQEGLCLIGDHLLLRCCPLWRSLL 2624
>UNIPROTKB|F1NWZ8 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9031 "Gallus gallus" [GO:0000076
"DNA replication checkpoint" evidence=IEA] [GO:0000729 "DNA
double-strand break processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0016890 "site-specific endodeoxyribonuclease activity, specific
for altered base" evidence=IEA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IEA] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IEA] [GO:0043139 "5'-3' DNA helicase activity"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0043504 "mitochondrial DNA repair"
evidence=IEA] [GO:0045740 "positive regulation of DNA replication"
evidence=IEA] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0005634 GO:GO:0006284 GO:GO:0042645 GO:GO:0016890
GO:GO:0045740 GO:GO:0017108 GO:GO:0043137 GO:GO:0005760
GO:GO:0043142 GO:GO:0043504 GO:GO:0006264 PANTHER:PTHR10887:SF14
EMBL:AADN02028013 GeneTree:ENSGT00550000074852 OMA:EHESLCH
IPI:IPI00584167 Ensembl:ENSGALT00000006429 ArrayExpress:F1NWZ8
Uniprot:F1NWZ8
Length = 1009
Score = 123 (48.4 bits), Expect = 0.00033, P = 0.00033
Identities = 53/171 (30%), Positives = 82/171 (47%)
Query: 3 LSVQYRMHPHIRDFPSRHFYQGRLT-DSESV----INLPD----EVYYKDP-------VL 46
L+VQYRM+ I ++ Y+G+L SE V NLP+ ++ + D VL
Sbjct: 841 LTVQYRMNSKIMSLSNKLVYEGKLECGSEKVSNATANLPNLKMLKLEFADASKTWLKEVL 900
Query: 47 ---RPYVFFDV--IHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVTVGII 101
+P F + + E G V NV EAK L L G +GII
Sbjct: 901 EPDKPVCFLNTEKVPAPEHTEKGGVC--NVTEAK----LVFFLTTLFIKAGCRPSDIGII 954
Query: 102 TPYKLQLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASN 152
+PY+ QLK + + +E + + +NT+D +QG+++ +II+S VR SN
Sbjct: 955 SPYRHQLKVITDLMARL---KENR-VEVNTIDKYQGRDKSIIIVSFVRNSN 1001
>WB|WBGene00010989 [details] [associations]
symbol:R03D7.2 species:6239 "Caenorhabditis elegans"
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
GO:GO:0006974 EMBL:Z46828 PIR:T23869 RefSeq:NP_496354.1
ProteinModelPortal:Q09594 SMR:Q09594 EnsemblMetazoa:R03D7.2
GeneID:174682 KEGG:cel:CELE_R03D7.2 UCSC:R03D7.2 CTD:174682
WormBase:R03D7.2 eggNOG:KOG1801 GeneTree:ENSGT00530000065249
InParanoid:Q09594 NextBio:885046 Uniprot:Q09594
Length = 542
Score = 119 (46.9 bits), Expect = 0.00041, P = 0.00041
Identities = 46/161 (28%), Positives = 74/161 (45%)
Query: 21 FYQGRLTDSE-SVINLPDEVYYKDPVLRPYVFFDVIHGRESHRGGSVSYQNVDEAKFGVC 79
FY LT S+ V ++P P P VF ++ S+ N EA++ +
Sbjct: 306 FYGNTLTSSKPGVTDIPVLKAMGLPSRHPMVF---VNYTSPQTAVGKSFSNEGEARYALQ 362
Query: 80 LYEHLQKTLKSMGLGKVTVGIITPYKLQLKCLQHEFRNVLNSEEGKDLYINTVDAFQGQE 139
L E L + S K+T I+ Y Q + V + E ++ +NT+D QGQE
Sbjct: 363 LVEALTR-YASTANKKITAAILNFYGAQ-------YSYVYSMAED-EVTVNTIDGCQGQE 413
Query: 140 RDVIIMSCVRASNHGVG-FVADIRRMNVALTRARRALWVMG 179
DV I+ R+ + F+ + R+NVAL+R + A ++G
Sbjct: 414 YDVTIVLLTRSDPYERSKFLVNANRINVALSRPKIATVIIG 454
>UNIPROTKB|P39369 [details] [associations]
symbol:yjhR "KpLE2 phage-like element; predicted frameshift
suppressor" species:83333 "Escherichia coli K-12" [GO:0008152
"metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001736 Pfam:PF00614 PROSITE:PS50035 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0016787 EMBL:U14003 eggNOG:COG1112 PIR:S56533
RefSeq:YP_492442.1 ProteinModelPortal:P39369 SMR:P39369
IntAct:P39369 EnsemblBacteria:EBESCT00000017476 GeneID:12930382
KEGG:ecj:Y75_p4194 PATRIC:48668203 EchoBASE:EB2448 EcoGene:EG12560
HOGENOM:HOG000081394 OMA:FIDQRAS BioCyc:EcoCyc:G7918-MONOMER
BioCyc:ECOL316407:JW4271-MONOMER Genevestigator:P39369
Uniprot:P39369
Length = 338
Score = 114 (45.2 bits), Expect = 0.00069, P = 0.00069
Identities = 37/132 (28%), Positives = 63/132 (47%)
Query: 55 IHGRESHRGGSVSYQNVDEAKFGVCLYEHLQKTLKSMG--LGKVTVGIITPYKLQLKCLQ 112
I GR G + ++ L H + G L KV VG++TP+ Q+ ++
Sbjct: 6 IDGRGMKPNGGSRHNPLEAETIAAWLVAHKDDIERHYGEPLYKV-VGVVTPFSAQVNAIK 64
Query: 113 HEFRNV-LNSEEGKDLY-INTVDAFQGQERDVIIMSCVRASNHGVGFVADIRR--MNVAL 168
R + +N ++ + L + TV + QG ER +++ S V S H G D +NVA+
Sbjct: 65 MSLRKLEINGKDEQGLLTVGTVHSLQGAERAIVLFSPVY-SKHEDGRFLDSNSTILNVAV 123
Query: 169 TRARRALWVMGN 180
+RA+ + V G+
Sbjct: 124 SRAKDSFLVFGD 135
>UNIPROTKB|E2RBM4 [details] [associations]
symbol:PRIC285 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001900 InterPro:IPR003593
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS50103 SMART:SM00382
SMART:SM00955 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0004540 InterPro:IPR022966 PROSITE:PS01175
PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:AAEX03014158 Ensembl:ENSCAFT00000020582 OMA:RCQYAHS
Uniprot:E2RBM4
Length = 2919
Score = 124 (48.7 bits), Expect = 0.00084, P = 0.00084
Identities = 55/207 (26%), Positives = 83/207 (40%)
Query: 2 LLSVQYRMHPHIRDFPSRHFYQGRLTDSESVINLPDEVYYKDPVLRPYVFFDVIHGRESH 61
+L QYRMH I FPS FY+ +L + + P + V F + G E
Sbjct: 2690 MLDTQYRMHEGICAFPSMEFYEKKLKTWQG-LRRPPSILGHIGKESCSVIFGHVQGHEQS 2748
Query: 62 RGGSVSYQNVDEAKFGVCLYEHLQKTLKSMGLGKVT----VGIITPYKLQLKCLQHEFRN 117
S N + +K + + K + LG+ V I+TPY Q E
Sbjct: 2749 LLVSTDEGN-ENSKANPEEVAAVVRIAKQLTLGRTVEPKDVAILTPYNAQAA----EISK 2803
Query: 118 VLNSEEGKDLYINTVDAFQGQERDVIIMSCVRASNHG--------------VGFVADIRR 163
L E + + ++ QG E +++S VR +GFV D +
Sbjct: 2804 RLVREGVSGVTVCSITKSQGSEWRYVLVSTVRTCQESDLDQRPTKSWLKRFLGFVVDPNQ 2863
Query: 164 MNVALTRARRALWVMGNAGALTQSDDW 190
+NVA+TRAR L V+G+ L+ W
Sbjct: 2864 VNVAITRAREGLCVIGDHRLLSCCPLW 2890
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.419 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 371 360 0.00082 117 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 156
No. of states in DFA: 617 (66 KB)
Total size of DFA: 267 KB (2142 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.42u 0.17s 28.59t Elapsed: 00:00:01
Total cpu time: 28.44u 0.17s 28.61t Elapsed: 00:00:01
Start: Fri May 10 03:03:48 2013 End: Fri May 10 03:03:49 2013
WARNINGS ISSUED: 1